Euteleostomi	ANCESTRAL SPECIES	754															ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00950000183145.D
Sarcopterygii	ANCESTRAL SPECIES	676															ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00950000183145.D
Tetrapoda	ANCESTRAL SPECIES	82	ENSGT00410000025651.A	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT01060000250264	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00940000165977	ENSGT01070000257310	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30
Amniota	ANCESTRAL SPECIES	18	ENSGT00940000155206	ENSGT00940000160764	ENSGT01060000250264	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Mammalia	ANCESTRAL SPECIES	37	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT01060000250264	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Theria	ANCESTRAL SPECIES	43	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Eutheria	ANCESTRAL SPECIES	22	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Glires	ANCESTRAL SPECIES	11	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Rodentia_B	ANCESTRAL SPECIES	29	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Myomorpha	ANCESTRAL SPECIES	31	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Muroidea	ANCESTRAL SPECIES	40	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000155882.a.a #22	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35
Muroidea_A	ANCESTRAL SPECIES	21	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Cricetidae	ANCESTRAL SPECIES	20	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Cricetidae_B	ANCESTRAL SPECIES	19	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Northern American deer mouse	MODERN SPECIES	15	Fzd9 (ENSPEMG00000015364) #7	Fkbp6 (ENSPEMG00000013089) #8	Trim50 (ENSPEMG00000010927) #9	Nsun5 (ENSPEMG00000010466) #10	Pom121 (ENSPEMG00000007281) #11	Hip1 (ENSPEMG00000009223) #12	ENSPEMG00000000524 #13	Ccl24 (ENSPEMG00000025178) #14	Rhbdd2 (ENSPEMG00000017440) #15	Por (ENSPEMG00000011574) #16	Tmem120a (ENSPEMG00000000313) #17	Styxl1 (ENSPEMG00000018661) #18	Mdh2 (ENSPEMG00000015814) #19	Srrm3 (ENSPEMG00000012358) #20	ENSPEMG00000009639 #21	Hspb1 (ENSPEMG00000011657) #22	Ywhag (ENSPEMG00000026931) #23	Ssc4d (ENSPEMG00000017631) #24	Zp3 (ENSPEMG00000015104) #25	Dtx2 (ENSPEMG00000008915) #26	Upk3b (ENSPEMG00000001248) #27	Upk3bl (ENSPEMG00000000360) #28	Rasa4 (ENSPEMG00000018519) #29	Polr2j (ENSPEMG00000015733) #30	Lrwd1 (ENSPEMG00000015279) #31	Alkbh4 (ENSPEMG00000012636) #32	Orai2 (ENSPEMG00000011989) #33	Prkrip1 (ENSPEMG00000010360) #34	Sh2b2 (ENSPEMG00000008979) #35	Cux1 (ENSPEMG00000008304) #36	Myl10 (ENSPEMG00000017542) #37
Prairie vole	MODERN SPECIES	7	Baz1b (ENSMOCG00000001392)	Fkbp6 (ENSMOCG00000017785) #8	Trim50 (ENSMOCG00000001798) #9	Nsun5 (ENSMOCG00000021028) #10	Pom121 (ENSMOCG00000009614) #11	Hip1 (ENSMOCG00000012389) #12	Ccl26 (ENSMOCG00000022100) #13	Ccl24 (ENSMOCG00000021321) #14	Rhbdd2 (ENSMOCG00000010816) #15	Por (ENSMOCG00000000571) #16	Tmem120a (ENSMOCG00000020081) #17	Styxl1 (ENSMOCG00000012960) #18	Mdh2 (ENSMOCG00000003419) #19	Srrm3 (ENSMOCG00000002565) #20	ENSMOCG00000022093 #21	Hspb1 (ENSMOCG00000012090) #22	Ywhag (ENSMOCG00000011990) #23	ENSMOCG00000019299 #24	ENSMOCG00000016588 #24	ENSMOCG00000015084	Zp3 (ENSMOCG00000018626) #25	Dtx2 (ENSMOCG00000021364) #26	ENSMOCG00000007291	Upk3b (ENSMOCG00000010264) #27	Upk3bl (ENSMOCG00000005696) #28	Rasa4 (ENSMOCG00000013840) #29	Polr2j (ENSMOCG00000001294) #30	Lrwd1 (ENSMOCG00000022481) #31	Alkbh4 (ENSMOCG00000007301) #32	ENSMOCG00000021437	Orai2 (ENSMOCG00000020871) #33
Cricetinae	ANCESTRAL SPECIES	27	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Chinese hamster chok1gshd	MODERN SPECIES	202	Bcl7b (ENSCGRG00001003854)	Baz1b (ENSCGRG00001000343)	Fzd9 (ENSCGRG00001008395) #7	Fkbp6 (ENSCGRG00001021414) #8	Trim50 (ENSCGRG00001000500) #9	Nsun5 (ENSCGRG00001006270) #10	Pom121 (ENSCGRG00001021017) #11	Hip1 (ENSCGRG00001010567) #12	Ccl24 (ENSCGRG00001012485) #14	Rhbdd2 (ENSCGRG00001013375) #15	Por (ENSCGRG00001019771) #16	Tmem120a (ENSCGRG00001015082) #17	Styxl1 (ENSCGRG00001012136) #18	Mdh2 (ENSCGRG00001023165) #19	Srrm3 (ENSCGRG00001011385) #20	Hspb1 (ENSCGRG00001015556) #22	ENSCGRG00001020860 #21	Ywhag (ENSCGRG00001021844) #23	Ssc4d (ENSCGRG00001013975) #24	Zp3 (ENSCGRG00001021528) #25	Dtx2 (ENSCGRG00001016639) #26	Upk3b (ENSCGRG00001000677) #27	Upk3bl (ENSCGRG00001001517) #28	Rasa4 (ENSCGRG00001023051) #29	Polr2j (ENSCGRG00001012814) #30	Lrwd1 (ENSCGRG00001018750) #31	Alkbh4 (ENSCGRG00001008366) #32	Orai2 (ENSCGRG00001016281) #33	Sh2b2 (ENSCGRG00001023493) #35	Cux1 (ENSCGRG00001022360) #36	Myl10 (ENSCGRG00001015932) #37
Golden Hamster	MODERN SPECIES	715	Mlxipl (ENSMAUG00000019597)	Tbl2 (ENSMAUG00000013229)	Bcl7b (ENSMAUG00000016763)	Fzd9 (ENSMAUG00000009265) #7	Trim50 (ENSMAUG00000007761) #9	Nsun5 (ENSMAUG00000019013) #10	Pom121 (ENSMAUG00000016562) #11	Hip1 (ENSMAUG00000008357) #12	Ccl24 (ENSMAUG00000006711) #14	Rhbdd2 (ENSMAUG00000019931) #15	Por (ENSMAUG00000010980) #16	Tmem120a (ENSMAUG00000019814) #17	Styxl1 (ENSMAUG00000003736) #18	ENSMAUG00000013304 #19	Srrm3 (ENSMAUG00000017613) #20	Hspb1 (ENSMAUG00000019545) #22	ENSMAUG00000020594 #21	Ywhag (ENSMAUG00000016499) #23	ENSMAUG00000020913 #24	ENSMAUG00000004811 #24	Zp3 (ENSMAUG00000020716) #25	ENSMAUG00000003071	Dtx2 (ENSMAUG00000018646) #26	Upk3b (ENSMAUG00000010258) #27	Upk3bl (ENSMAUG00000007976) #28	Rasa4 (ENSMAUG00000021730) #29	Polr2j (ENSMAUG00000013049) #30	Lrwd1 (ENSMAUG00000009363) #31	Alkbh4 (ENSMAUG00000005177) #32	Orai2 (ENSMAUG00000008449) #33	Prkrip1 (ENSMAUG00000013686) #34
Murinae	ANCESTRAL SPECIES	20	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00960000192995	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Mus	ANCESTRAL SPECIES	17	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00960000192995	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00960000192995	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00960000192995	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Mouse	MODERN SPECIES	14	Baz1b (ENSMUSG00000002748)	Fzd9 (ENSMUSG00000049551) #7	Fkbp6 (ENSMUSG00000040013) #8	Trim50 (ENSMUSG00000053388) #9	Nsun5 (ENSMUSG00000000916) #10	Pom121 (ENSMUSG00000053293) #11	Hip1 (ENSMUSG00000039959) #12	Ccl26 (ENSMUSG00000070464) #13	Ccl24 (ENSMUSG00000004814) #14	Rhbdd2 (ENSMUSG00000039917) #15	Por (ENSMUSG00000005514) #16	Tmem120a (ENSMUSG00000039886) #17	Styxl1 (ENSMUSG00000019178) #18	Mdh2 (ENSMUSG00000019179) #19	Srrm3 (ENSMUSG00000039860) #20	Hspb1 (ENSMUSG00000004951) #22	Ywhag (ENSMUSG00000051391) #23	Ssc4d (ENSMUSG00000029699) #24	Zp3 (ENSMUSG00000004948) #25	Dtx2 (ENSMUSG00000004947) #26	Upk3b (ENSMUSG00000042985) #27	Upk3bl (ENSMUSG00000006143) #28	Rasa4 (ENSMUSG00000004952) #29	Polr2j (ENSMUSG00000039771) #30	Lrwd1 (ENSMUSG00000029703) #31	Alkbh4 (ENSMUSG00000039754) #32	Orai2 (ENSMUSG00000039747) #33	Prkrip1 (ENSMUSG00000039737) #34	Sh2b2 (ENSMUSG00000005057) #35	Cux1 (ENSMUSG00000029705) #36	Myl10 (ENSMUSG00000005474) #37
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00960000192995	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
spretus	MODERN SPECIES	14	Baz1b (MGP_SPRETEiJ_G0028830)	Fzd9 (MGP_SPRETEiJ_G0028831) #7	Fkbp6 (MGP_SPRETEiJ_G0028832) #8	Trim50 (MGP_SPRETEiJ_G0028833) #9	Nsun5 (MGP_SPRETEiJ_G0028834) #10	Pom121 (MGP_SPRETEiJ_G0028835) #11	Hip1 (MGP_SPRETEiJ_G0028836) #12	Ccl26 (MGP_SPRETEiJ_G0028837) #13	Ccl24 (MGP_SPRETEiJ_G0028838) #14	Rhbdd2 (MGP_SPRETEiJ_G0028839) #15	Por (MGP_SPRETEiJ_G0028840) #16	Tmem120a (MGP_SPRETEiJ_G0028841) #17	Styxl1 (MGP_SPRETEiJ_G0028842) #18	Mdh2 (MGP_SPRETEiJ_G0028843) #19	Srrm3 (MGP_SPRETEiJ_G0028844) #20	Hspb1 (MGP_SPRETEiJ_G0028845) #22	Ywhag (MGP_SPRETEiJ_G0028846) #23	Ssc4d (MGP_SPRETEiJ_G0028847) #24	Zp3 (MGP_SPRETEiJ_G0028848) #25	Dtx2 (MGP_SPRETEiJ_G0028849) #26	Upk3b (MGP_SPRETEiJ_G0028850) #27	MGP_SPRETEiJ_G0028851 #28	Rasa4 (MGP_SPRETEiJ_G0028852) #29	Polr2j (MGP_SPRETEiJ_G0028853) #30	Lrwd1 (MGP_SPRETEiJ_G0028854) #31	Alkbh4 (MGP_SPRETEiJ_G0028855) #32	Orai2 (MGP_SPRETEiJ_G0028856) #33	Prkrip1 (MGP_SPRETEiJ_G0028857) #34	Sh2b2 (MGP_SPRETEiJ_G0028858) #35	Cux1 (MGP_SPRETEiJ_G0028859) #36	Myl10 (MGP_SPRETEiJ_G0028860) #37
Steppe mouse	MODERN SPECIES	149	Trim50 (ENSMSIG00000012728) #9	Nsun5 (ENSMSIG00000012692) #10	Pom121 (ENSMSIG00000012657) #11	Hip1 (ENSMSIG00000012530) #12	ENSMSIG00000012522 #13	Ccl24 (ENSMSIG00000012496) #14	ENSMSIG00000012490	Rhbdd2 (ENSMSIG00000012475) #15	ENSMSIG00000012471	Por (ENSMSIG00000012432) #16	Tmem120a (ENSMSIG00000012392) #17	Styxl1 (ENSMSIG00000012359) #18	Mdh2 (ENSMSIG00000012322) #19	Srrm3 (ENSMSIG00000012244) #20	ENSMSIG00000012220 #21	Hspb1 (ENSMSIG00000012191) #22	Ssc4d (ENSMSIG00000012082) #24	Zp3 (ENSMSIG00000012053) #25	Dtx2 (ENSMSIG00000011974) #26	Upk3b (ENSMSIG00000011952) #27	Upk3bl (ENSMSIG00000011930) #28	Rasa4 (ENSMSIG00000011823) #29	Polr2j (ENSMSIG00000011788) #30	Lrwd1 (ENSMSIG00000011767) #31	Alkbh4 (ENSMSIG00000011753) #32	Orai2 (ENSMSIG00000011723) #33	Prkrip1 (ENSMSIG00000011717) #34	Sh2b2 (ENSMSIG00000011674) #35	Cux1 (ENSMSIG00000010755) #36	ENSMSIG00000010739	ENSMSIG00000010699 #37
Shrew mouse	MODERN SPECIES	15	Baz1b (MGP_PahariEiJ_G0024411)	Fzd9 (MGP_PahariEiJ_G0024412) #7	Fkbp6 (MGP_PahariEiJ_G0024413) #8	Trim50 (MGP_PahariEiJ_G0024414) #9	Nsun5 (MGP_PahariEiJ_G0024415) #10	Pom121 (MGP_PahariEiJ_G0024416) #11	Hip1 (MGP_PahariEiJ_G0024417) #12	Ccl26 (MGP_PahariEiJ_G0024418) #13	Ccl24 (MGP_PahariEiJ_G0024419) #14	Rhbdd2 (MGP_PahariEiJ_G0024420) #15	Por (MGP_PahariEiJ_G0024421) #16	Tmem120a (MGP_PahariEiJ_G0024422) #17	Styxl1 (MGP_PahariEiJ_G0024423) #18	MGP_PahariEiJ_G0024424 #19	Srrm3 (MGP_PahariEiJ_G0024425) #20	Hspb1 (MGP_PahariEiJ_G0024426) #22	Ywhag (MGP_PahariEiJ_G0024427) #23	Ssc4d (MGP_PahariEiJ_G0024428) #24	Zp3 (MGP_PahariEiJ_G0024429) #25	Dtx2 (MGP_PahariEiJ_G0024430) #26	Upk3b (MGP_PahariEiJ_G0024431) #27	MGP_PahariEiJ_G0024432 #28	Rasa4 (MGP_PahariEiJ_G0024433) #29	Polr2j (MGP_PahariEiJ_G0024434) #30	Lrwd1 (MGP_PahariEiJ_G0024435) #31	Alkbh4 (MGP_PahariEiJ_G0024436) #32	Orai2 (MGP_PahariEiJ_G0024437) #33	Prkrip1 (MGP_PahariEiJ_G0024438) #34	MGP_PahariEiJ_G0024439 #35	Cux1 (MGP_PahariEiJ_G0024440) #36	Myl10 (MGP_PahariEiJ_G0024441) #37
Rat	MODERN SPECIES	3	Fzd9 (ENSRNOG00000001452) #7	Fkbp6 (ENSRNOG00000001451) #8	Trim50 (ENSRNOG00000022483) #9	Nsun5 (ENSRNOG00000001450) #10	Pom121 (ENSRNOG00000001449) #11	Hip1 (ENSRNOG00000001448) #12	Ccl26 (ENSRNOG00000001444) ##14	Ccl24 (ENSRNOG00000031162) #14	Rhbdd2 (ENSRNOG00000001443) #15	AABR07035832.1 (ENSRNOG00000055795)	Por (ENSRNOG00000001442) #16	Tmem120a (ENSRNOG00000001441) #17	Styxl1 (ENSRNOG00000023366) #18	Mdh2 (ENSRNOG00000001440) #19	Srrm3 (ENSRNOG00000001439) #20	Hspb1 (ENSRNOG00000023546) #22	Ywhag (ENSRNOG00000001436) #23	Ssc4d (ENSRNOG00000001435) #24	Zp3 (ENSRNOG00000001434) #25	Dtx2 (ENSRNOG00000001432) #26	Upk3b (ENSRNOG00000023686) #27	Upk3bl1 (ENSRNOG00000038896) #28	Rasa4 (ENSRNOG00000001431) #29	Polr2j (ENSRNOG00000001430) #30	Lrwd1 (ENSRNOG00000001429) #31	Alkbh4 (ENSRNOG00000001428) #32	Orai2 (ENSRNOG00000001427) #33	Prkrip1 (ENSRNOG00000063308) #34	Sh2b2 (ENSRNOG00000001425) #35	Cux1 (ENSRNOG00000001424) #36	Myl10 (ENSRNOG00000028981) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	779										Por (ENSNGAG00000014471) #16	Tmem120a (ENSNGAG00000013660) #17	ENSNGAG00000022860 #18	ENSNGAG00000013372	Mdh2 (ENSNGAG00000001880) #19	ENSNGAG00000005825	Hspb1 (ENSNGAG00000021729) #22	ENSNGAG00000021979 #21	Ywhag (ENSNGAG00000022966) #23	ENSNGAG00000024341 #24	ENSNGAG00000023575 #24	Zp3 (ENSNGAG00000003124) #25	ENSNGAG00000011498	Dtx2 (ENSNGAG00000023472) #26	Upk3b (ENSNGAG00000020529) #27	ENSNGAG00000018360 #28	Rasa4 (ENSNGAG00000023155) #29	Polr2j (ENSNGAG00000023412) #30	Lrwd1 (ENSNGAG00000016699) #31	Alkbh4 (ENSNGAG00000001173) #32	Orai2 (ENSNGAG00000022341) #33	Prkrip1 (ENSNGAG00000023451) #34
Lesser Egyptian jerboa	MODERN SPECIES	130	Bud23 (ENSJJAG00000022163)	ENSJJAG00000024021	Vps37d (ENSJJAG00000015685)	Tbl2 (ENSJJAG00000021022)	Bcl7b (ENSJJAG00000022923)	Baz1b (ENSJJAG00000021158)	Trim50 (ENSJJAG00000016334) #9	Nsun5 (ENSJJAG00000012146) #10	Pom121 (ENSJJAG00000018532) #11	ENSJJAG00000014696	Rhbdd2 (ENSJJAG00000015495) #15	Por (ENSJJAG00000016747) #16	Tmem120a (ENSJJAG00000022790) #17	Mdh2 (ENSJJAG00000018027) #19	Srrm3 (ENSJJAG00000023441) #20	Hspb1 (ENSJJAG00000021615) #22	Ywhag (ENSJJAG00000024058) #23	Ssc4d (ENSJJAG00000013755) #24	Dtx2 (ENSJJAG00000008103) #26	Upk3b (ENSJJAG00000013885) #27	ENSJJAG00000016841 #28	ENSJJAG00000013854 #30	Lrwd1 (ENSJJAG00000015564) #31	Alkbh4 (ENSJJAG00000022071) #32	Sh2b2 (ENSJJAG00000013976) #35	Myl10 (ENSJJAG00000022286) #37	Col26a1 (ENSJJAG00000020129)	Ift22 (ENSJJAG00000014116)	ENSJJAG00000014286	Fis1 (ENSJJAG00000022326)	Cldn15 (ENSJJAG00000023093)
Kangaroo rat	MODERN SPECIES	462	ENSDORG00000026621	Baz1b (ENSDORG00000012540)	Fzd9 (ENSDORG00000012533) #7	ENSDORG00000015387 #8	Trim50 (ENSDORG00000015388) #9	Nsun5 (ENSDORG00000010530) #10	Pom121 (ENSDORG00000010532) #11	Hip1 (ENSDORG00000010537) #12	Rhbdd2 (ENSDORG00000027016) #15	Por (ENSDORG00000013993) #16	Tmem120a (ENSDORG00000013996) #17	Styxl1 (ENSDORG00000009567) #18	Mdh2 (ENSDORG00000009571) #19	ENSDORG00000014356	ENSDORG00000027991	Hspb1 (ENSDORG00000013353) #22	Ywhag (ENSDORG00000026427) #23	ENSDORG00000004820 #24	Zp3 (ENSDORG00000004823) #25	Dtx2 (ENSDORG00000014423) #26	ENSDORG00000025640 #28	Rasa4 (ENSDORG00000005796) #29	Polr2j (ENSDORG00000005934) #30	Lrwd1 (ENSDORG00000005932) #31	Alkbh4 (ENSDORG00000005931) #32	Orai2 (ENSDORG00000028267) #33	Prkrip1 (ENSDORG00000005929) #34	Sh2b2 (ENSDORG00000005927) #35	Cux1 (ENSDORG00000005924) #36	Myl10 (ENSDORG00000008118) #37	Col26a1 (ENSDORG00000004325)
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g.i #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975.y.a #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Marmotini	ANCESTRAL SPECIES	3	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g.i #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975.y.a #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g.i #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975.y.a #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Squirrel	MODERN SPECIES	143	FKBP6 (ENSSTOG00000010978) #8	TRIM50 (ENSSTOG00000010973) #9	NSUN5 (ENSSTOG00000015023) #10	ENSSTOG00000015016 #11	HIP1 (ENSSTOG00000004939) #12	CCL26 (ENSSTOG00000033352) ##14	CCL24 (ENSSTOG00000004986) #14	RHBDD2 (ENSSTOG00000023795) #15	POR (ENSSTOG00000020620) #16	TMEM120A (ENSSTOG00000027103) #17	ENSSTOG00000033624	ENSSTOG00000016176 #18	MDH2 (ENSSTOG00000016181) #19	SRRM3 (ENSSTOG00000014181) #20	ENSSTOG00000032667 #21	HSPB1 (ENSSTOG00000024166) #22	YWHAG (ENSSTOG00000014195) #23	SSC4D (ENSSTOG00000014048) #24	ENSSTOG00000004453 #25	DTX2 (ENSSTOG00000026249) #26	UPK3B (ENSSTOG00000002892) #27	ENSSTOG00000016444 #28	ENSSTOG00000007557 #29	ENSSTOG00000006377 #30	LRWD1 (ENSSTOG00000006339) #31	ALKBH4 (ENSSTOG00000033734) #32	ORAI2 (ENSSTOG00000003084) #33	SH2B2 (ENSSTOG00000024384) #35	CUX1 (ENSSTOG00000010390) #36	MYL10 (ENSSTOG00000028388) #37	COL26A1 (ENSSTOG00000020628)
Arctic ground squirrel	MODERN SPECIES	176	FKBP6 (ENSUPAG00010015780) #8	TRIM50 (ENSUPAG00010015761) #9	NSUN5 (ENSUPAG00010015725) #10	ENSUPAG00010015715 #11	ENSUPAG00010015708	HIP1 (ENSUPAG00010015650) #12	CCL26 (ENSUPAG00010015644) ##14	CCL24 (ENSUPAG00010015638) #14	RHBDD2 (ENSUPAG00010015620) #15	POR (ENSUPAG00010015566) #16	TMEM120A (ENSUPAG00010015529) #17	STYXL1 (ENSUPAG00010015506) #18	MDH2 (ENSUPAG00010015470) #19	SRRM3 (ENSUPAG00010015439) #20	ENSUPAG00010015432 #21	HSPB1 (ENSUPAG00010015423) #22	YWHAG (ENSUPAG00010015405) #23	SSC4D (ENSUPAG00010015381) #24	ENSUPAG00010015360 #25	DTX2 (ENSUPAG00010015290) #26	UPK3B (ENSUPAG00010015279) #27	ENSUPAG00010015198 #29	ENSUPAG00010015171 #30	LRWD1 (ENSUPAG00010015148) #31	ALKBH4 (ENSUPAG00010015139) #32	ORAI2 (ENSUPAG00010015127) #33	PRKRIP1 (ENSUPAG00010015116) #34	SH2B2 (ENSUPAG00010015103) #35	CUX1 (ENSUPAG00010014829) #36	MYL10 (ENSUPAG00010014807) #37	IFT22 (ENSUPAG00010014792)
Alpin marmot	MODERN SPECIES	28	BAZ1B (ENSMMMG00000010099)	FZD9 (ENSMMMG00000010138) #7	TRIM50 (ENSMMMG00000010149) #9	NSUN5 (ENSMMMG00000010167) #10	ENSMMMG00000010192 #11	HIP1 (ENSMMMG00000010793) #12	ENSMMMG00000010833	ENSMMMG00000010844 #13	ENSMMMG00000010854	RHBDD2 (ENSMMMG00000010864) #15	POR (ENSMMMG00000010877) #16	TMEM120A (ENSMMMG00000010901) #17	ENSMMMG00000010925 #18	MDH2 (ENSMMMG00000010939) #19	ENSMMMG00000010952	HSPB1 (ENSMMMG00000010959) #22	YWHAG (ENSMMMG00000010981) #23	SSC4D (ENSMMMG00000010987) #24	ENSMMMG00000011041 #25	DTX2 (ENSMMMG00000011062) #26	UPK3B (ENSMMMG00000011175) #27	ENSMMMG00000011184 #28	ENSMMMG00000011205 #29	ENSMMMG00000011307 #30	LRWD1 (ENSMMMG00000011313) #31	ALKBH4 (ENSMMMG00000011324) #32	ORAI2 (ENSMMMG00000011333) #33	PRKRIP1 (ENSMMMG00000011369) #34	SH2B2 (ENSMMMG00000011400) #35	ENSMMMG00000011411	MYL10 (ENSMMMG00000011484) #37
Eurasian red squirrel	MODERN SPECIES	9	FKBP6 (ENSSVLG00005022320) #8	TRIM50 (ENSSVLG00005022215) #9	NSUN5 (ENSSVLG00005022175) #10	ENSSVLG00005022142 #11	ENSSVLG00005022078	HIP1 (ENSSVLG00005021806) #12	CCL26 (ENSSVLG00005021704) ##14	CCL24 (ENSSVLG00005021667) #14	RHBDD2 (ENSSVLG00005021618) #15	POR (ENSSVLG00005021383) #16	TMEM120A (ENSSVLG00005021315) #17	STYXL1 (ENSSVLG00005021079) #18	MDH2 (ENSSVLG00005020984) #19	SRRM3 (ENSSVLG00005020839) #20	ENSSVLG00005020803 #21	HSPB1 (ENSSVLG00005020784) #22	YWHAG (ENSSVLG00005020755) #23	SSC4D (ENSSVLG00005020658) #24	ENSSVLG00005020463 #25	DTX2 (ENSSVLG00005020370) #26	UPK3B (ENSSVLG00005020248) #27	ENSSVLG00005020097 #28	ENSSVLG00005019845 #29	ENSSVLG00005019755 #30	LRWD1 (ENSSVLG00005019713) #31	ALKBH4 (ENSSVLG00005019634) #32	ORAI2 (ENSSVLG00005019598) #33	PRKRIP1 (ENSSVLG00005019525) #34	ENSSVLG00005019416	SH2B2 (ENSSVLG00005019368) #35	ENSSVLG00005019320 #36
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Hystricomorpha_b	ANCESTRAL SPECIES	38	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Long-tailed chinchilla	MODERN SPECIES	370																HSPB1 (ENSCLAG00000000848) #22	ENSCLAG00000000872 #21
Degu	MODERN SPECIES	76	NSUN5 (ENSODEG00000015132) #10	ENSODEG00000015346 #11	HIP1 (ENSODEG00000016265) #12	CCL24 (ENSODEG00000015142) #14	ENSODEG00000020305	ENSODEG00000015707	ENSODEG00000015918	RHBDD2 (ENSODEG00000016225) #15	POR (ENSODEG00000015517) #16	TMEM120A (ENSODEG00000015559) #17	STYXL1 (ENSODEG00000015904) #18	ENSODEG00000020351	ENSODEG00000015859 #19	SRRM3 (ENSODEG00000015988) #20	ENSODEG00000016162 #21	HSPB1 (ENSODEG00000015698) #22	YWHAG (ENSODEG00000016579) #23	SSC4D (ENSODEG00000015613) #24	ENSODEG00000016251 #25	DTX2 (ENSODEG00000015332) #26	UPK3B (ENSODEG00000015729) #27	ENSODEG00000015493 #28	ENSODEG00000015946 #29	ENSODEG00000015648 #30	LRWD1 (ENSODEG00000016108) #31	ALKBH4 (ENSODEG00000016300) #32	ORAI2 (ENSODEG00000016077) #33	ENSODEG00000015649 #34	ENSODEG00000015851	SH2B2 (ENSODEG00000015618) #35	ENSODEG00000015786
Guinea pig	MODERN SPECIES	30	TBL2 (ENSCPOG00000030307)	BCL7B (ENSCPOG00000015110)	BAZ1B (ENSCPOG00000011829)	FZD9 (ENSCPOG00000038130) #7	ENSCPOG00000003350 #8	TRIM50 (ENSCPOG00000013325) #9	NSUN5 (ENSCPOG00000023149) #10	ENSCPOG00000008901 #11	HIP1 (ENSCPOG00000006880) #12	RHBDD2 (ENSCPOG00000036336) #15	POR (ENSCPOG00000006202) #16	TMEM120A (ENSCPOG00000006218) #17	STYXL1 (ENSCPOG00000006224) #18	MDH2 (ENSCPOG00000010145) #19	SRRM3 (ENSCPOG00000038685) #20	HSPB1 (ENSCPOG00000033782) #22	ENSCPOG00000023568 #21	YWHAG (ENSCPOG00000030753) #23	SSC4D (ENSCPOG00000023791) #24	ENSCPOG00000022445 #25	ENSCPOG00000014083 #26	UPK3B (ENSCPOG00000024192) #27	ENSCPOG00000024411 #28	ENSCPOG00000006704 #29	ENSCPOG00000001401 #30	LRWD1 (ENSCPOG00000001400) #31	ALKBH4 (ENSCPOG00000040147) #32	ORAI2 (ENSCPOG00000037458) #33	PRKRIP1 (ENSCPOG00000032794) #34	SH2B2 (ENSCPOG00000007558) #35	CUX1 (ENSCPOG00000008564) #36
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000039082	ENSHGLG00000040182	FZD9 (ENSHGLG00000049075) #7	FKBP6 (ENSHGLG00000013613) #8	TRIM50 (ENSHGLG00000043808) #9	ENSHGLG00000018321 #10	ENSHGLG00000016402 #12	ENSHGLG00000050622	ENSHGLG00000018355 #14	RHBDD2 (ENSHGLG00000043365) #15	POR (ENSHGLG00000009789) #16	TMEM120A (ENSHGLG00000016576) #17	ENSHGLG00000038865 #18	MDH2 (ENSHGLG00000043069) #19	ENSHGLG00000045940	HSPB1 (ENSHGLG00000034303) #22	ENSHGLG00000050524 #23	SSC4D (ENSHGLG00000016079) #24	ENSHGLG00000013732 #25	ENSHGLG00000016235 #26	ENSHGLG00000005352 #28	ENSHGLG00000006980 #29	ENSHGLG00000013598 #30	LRWD1 (ENSHGLG00000016028) #31	ALKBH4 (ENSHGLG00000035095) #32	ORAI2 (ENSHGLG00000046001) #33	PRKRIP1 (ENSHGLG00000050132) #34	SH2B2 (ENSHGLG00000015375) #35	CUX1 (ENSHGLG00000016002) #36	MYL10 (ENSHGLG00000008103) #37	ENSHGLG00000020781
Lagomorpha	ANCESTRAL SPECIES	89	ENSGT00390000013836	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27
Pika	MODERN SPECIES	10078																HSPB1 (ENSOPRG00000008006) #22
Rabbit	MODERN SPECIES	17	ACTL6B (ENSOCUG00000014727)	GNB2 (ENSOCUG00000002657)	GIGYF1 (ENSOCUG00000002663)	POP7 (ENSOCUG00000007818)	EPO (ENSOCUG00000005399)	ZAN (ENSOCUG00000005589)	EPHB4 (ENSOCUG00000016902)	SLC12A9 (ENSOCUG00000000382)	ENSOCUG00000027199	ENSOCUG00000025061 #14	RHBDD2 (ENSOCUG00000013803) #15	POR (ENSOCUG00000021696) #16	STYXL1 (ENSOCUG00000027186) #18	MDH2 (ENSOCUG00000014322) #19	ENSOCUG00000036096	HSPB1 (ENSOCUG00000012690) #22	YWHAG (ENSOCUG00000008521) #23	SSC4D (ENSOCUG00000016629) #24	ENSOCUG00000015762 #25	DTX2 (ENSOCUG00000000565) #26	UPK3B (ENSOCUG00000012402) #27	ENSOCUG00000032548	ENSOCUG00000034386	ENSOCUG00000026155	AUTS2 (ENSOCUG00000008775)	GALNT17 (ENSOCUG00000007108)	CALN1 (ENSOCUG00000000973)	ENSOCUG00000035113	ENSOCUG00000002727	LAT (ENSOCUG00000025590)	SPNS1 (ENSOCUG00000022226)
Tree shrew	MODERN SPECIES	8474																HSPB1 (ENSTBEG00000014576) #22
Primates	ANCESTRAL SPECIES	11	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Strepsirrhini	ANCESTRAL SPECIES	14	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Lemuriformes_a	ANCESTRAL SPECIES	14	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Greater bamboo lemur	MODERN SPECIES	898							HIP1 (ENSPSMG00000013228) #12	CCL26 (ENSPSMG00000013123) ##14	CCL24 (ENSPSMG00000013117) #14	ENSPSMG00000013111	RHBDD2 (ENSPSMG00000013106) #15	POR (ENSPSMG00000013087) #16	TMEM120A (ENSPSMG00000013054) #17	STYXL1 (ENSPSMG00000013023) #18	ENSPSMG00000012956 #19	HSPB1 (ENSPSMG00000012885) #22	YWHAG (ENSPSMG00000012876) #23
Coquerels sifaka	MODERN SPECIES	192	FZD9 (ENSPCOG00000010444) #7	FKBP6 (ENSPCOG00000019273) #8	TRIM50 (ENSPCOG00000016358) #9	NSUN5 (ENSPCOG00000026928) #10	ENSPCOG00000023372 #11	HIP1 (ENSPCOG00000027292) #12	CCL26 (ENSPCOG00000021224) ##14	CCL24 (ENSPCOG00000010476) #14	RHBDD2 (ENSPCOG00000016502) #15	POR (ENSPCOG00000028133) #16	TMEM120A (ENSPCOG00000027815) #17	ENSPCOG00000026531	STYXL1 (ENSPCOG00000018221) #18	MDH2 (ENSPCOG00000022120) #19	SRRM3 (ENSPCOG00000028464) #20	HSPB1 (ENSPCOG00000028119) #22	YWHAG (ENSPCOG00000014301) #23	SSC4D (ENSPCOG00000007955) #24	ENSPCOG00000021659 #25	DTX2 (ENSPCOG00000028216) #26	UPK3B (ENSPCOG00000024877) #27	ENSPCOG00000000508 #28	ENSPCOG00000020603 #29	ENSPCOG00000024573 #30	LRWD1 (ENSPCOG00000016412) #31	ALKBH4 (ENSPCOG00000015199) #32	ORAI2 (ENSPCOG00000001571) #33	PRKRIP1 (ENSPCOG00000022968) #34	ENSPCOG00000014484 #35
Mouse lemur	MODERN SPECIES	8	FZD9 (ENSMICG00000038202) #7	FKBP6 (ENSMICG00000026618) #8	TRIM50 (ENSMICG00000009226) #9	NSUN5 (ENSMICG00000035469) #10	ENSMICG00000036005	ENSMICG00000028437	ENSMICG00000027893 #11	HIP1 (ENSMICG00000009230) #12	CCL24 (ENSMICG00000026489) #14	RHBDD2 (ENSMICG00000043146) #15	POR (ENSMICG00000003908) #16	TMEM120A (ENSMICG00000037951) #17	STYXL1 (ENSMICG00000003929) #18	MDH2 (ENSMICG00000003939) #19	SRRM3 (ENSMICG00000010668) #20	HSPB1 (ENSMICG00000010684) #22	YWHAG (ENSMICG00000032559) #23	SSC4D (ENSMICG00000044731) #24	ENSMICG00000014092 #25	DTX2 (ENSMICG00000014104) #26	UPK3B (ENSMICG00000031538) #27	ENSMICG00000010328 #29	ENSMICG00000010323	LRWD1 (ENSMICG00000010317) #31	ALKBH4 (ENSMICG00000010314) #32	ORAI2 (ENSMICG00000010309) #33	PRKRIP1 (ENSMICG00000010307) #34	SH2B2 (ENSMICG00000010295) #35	CUX1 (ENSMICG00000010274) #36	MYL10 (ENSMICG00000035701) #37	COL26A1 (ENSMICG00000010259)
Bushbaby	MODERN SPECIES	192	BCL7B (ENSOGAG00000014066)	BAZ1B (ENSOGAG00000002371)	FZD9 (ENSOGAG00000027505) #7	FKBP6 (ENSOGAG00000002368) #8	TRIM50 (ENSOGAG00000002366) #9	NSUN5 (ENSOGAG00000002362) #10	ENSOGAG00000032535 #11	HIP1 (ENSOGAG00000001385) #12	CCL26 (ENSOGAG00000031412) ##14	CCL24 (ENSOGAG00000003056) #14	POR (ENSOGAG00000010666) #16	TMEM120A (ENSOGAG00000010668) #17	STYXL1 (ENSOGAG00000027075) #18	MDH2 (ENSOGAG00000009705) #19	SRRM3 (ENSOGAG00000030805) #20	HSPB1 (ENSOGAG00000007531) #22	YWHAG (ENSOGAG00000002720) #23	SSC4D (ENSOGAG00000007534) #24	ENSOGAG00000031617 #25	DTX2 (ENSOGAG00000013063) #26	UPK3B (ENSOGAG00000034356) #27	ENSOGAG00000025355 #28	ENSOGAG00000034078 #29	ENSOGAG00000008250 #30	LRWD1 (ENSOGAG00000008241) #31	ALKBH4 (ENSOGAG00000009229) #32	ORAI2 (ENSOGAG00000008236) #33	PRKRIP1 (ENSOGAG00000011978) #34	SH2B2 (ENSOGAG00000025425) #35	CUX1 (ENSOGAG00000009038) #36	ENSOGAG00000031175
Haplorrhini	ANCESTRAL SPECIES	26	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Simiiformes	ANCESTRAL SPECIES	26	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00910000147473	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.u.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.u.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Marmoset	MODERN SPECIES	11	BAZ1B (ENSCJAG00000016867)	ENSCJAG00000078494	FZD9 (ENSCJAG00000045266) #7	FKBP6 (ENSCJAG00000016944) #8	TRIM50 (ENSCJAG00000016956) #9	NSUN5 (ENSCJAG00000016968) #10	ENSCJAG00000016983 #11	HIP1 (ENSCJAG00000016998) #12	CCL24 (ENSCJAG00000077010) #14	RHBDD2 (ENSCJAG00000066535) #15	POR (ENSCJAG00000012804) #16	TMEM120A (ENSCJAG00000042829) #17	STYXL1 (ENSCJAG00000001347) #18	MDH2 (ENSCJAG00000016316) #19	SRRM3 (ENSCJAG00000016307) #20	HSPB1 (ENSCJAG00000016303) #22	YWHAG (ENSCJAG00000041774) #23	SSC4D (ENSCJAG00000016269) #24	ENSCJAG00000016252 #25	DTX2 (ENSCJAG00000016235) #26	ENSCJAG00000016216 #29	ENSCJAG00000016203 #30	LRWD1 (ENSCJAG00000016191) #31	ALKBH4 (ENSCJAG00000048420) #32	ORAI2 (ENSCJAG00000016180) #33	PRKRIP1 (ENSCJAG00000042036) #34	SH2B2 (ENSCJAG00000016164) #35	CUX1 (ENSCJAG00000016076) #36	MYL10 (ENSCJAG00000016065) #37	COL26A1 (ENSCJAG00000016061)	IFT22 (ENSCJAG00000047492)
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.u.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Capuchin	MODERN SPECIES	82	FZD9 (ENSCCAG00000017757) #7	FKBP6 (ENSCCAG00000021988) #8	TRIM50 (ENSCCAG00000023148) #9	NSUN5 (ENSCCAG00000021042) #10	ENSCCAG00000023740 #11	ENSCCAG00000027311	HIP1 (ENSCCAG00000023695) #12	CCL26 (ENSCCAG00000026583) ##14	CCL24 (ENSCCAG00000027216) #14	RHBDD2 (ENSCCAG00000036142) #15	POR (ENSCCAG00000031174) #16	TMEM120A (ENSCCAG00000021550) #17	STYXL1 (ENSCCAG00000034143) #18	MDH2 (ENSCCAG00000024238) #19	SRRM3 (ENSCCAG00000033359) #20	ENSCCAG00000027999 #22	YWHAG (ENSCCAG00000034257) #23	SSC4D (ENSCCAG00000033834) #24	ENSCCAG00000009163 #25	DTX2 (ENSCCAG00000019548) #26	UPK3B (ENSCCAG00000033171) #27	ENSCCAG00000035911 #28	ENSCCAG00000034641 #29	POLR2J2 (ENSCCAG00000029378)	LRWD1 (ENSCCAG00000022869) #31	ALKBH4 (ENSCCAG00000031886) #32	ORAI2 (ENSCCAG00000028971) #33	PRKRIP1 (ENSCCAG00000004554) #34	SH2B2 (ENSCCAG00000021819) #35	CUX1 (ENSCCAG00000032819) #36	ENSCCAG00000033450
Mas night monkey	MODERN SPECIES	286	BCL7B (ENSANAG00000037199)	BAZ1B (ENSANAG00000023376)	FZD9 (ENSANAG00000020696) #7	FKBP6 (ENSANAG00000034221) #8	ENSANAG00000019922 #8	TRIM50 (ENSANAG00000037224) #9	NSUN5 (ENSANAG00000029059) #10	ENSANAG00000030144 #11	HIP1 (ENSANAG00000021506) #12	RHBDD2 (ENSANAG00000026362) #15	POR (ENSANAG00000026858) #16	TMEM120A (ENSANAG00000036879) #17	STYXL1 (ENSANAG00000025196) #18	ENSANAG00000034885 #19	SRRM3 (ENSANAG00000031983) #20	ENSANAG00000038163 #22	YWHAG (ENSANAG00000029722) #23	SSC4D (ENSANAG00000021155) #24	ENSANAG00000037554 #25	DTX2 (ENSANAG00000002837) #26	ENSANAG00000032904 #27	ENSANAG00000026136 #28	ENSANAG00000034232 #29	ENSANAG00000037993	ENSANAG00000020385	LRWD1 (ENSANAG00000024129) #31	ALKBH4 (ENSANAG00000026350) #32	ORAI2 (ENSANAG00000019624) #33	PRKRIP1 (ENSANAG00000028382) #34	SH2B2 (ENSANAG00000028421) #35	CUX1 (ENSANAG00000022374) #36
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.u.a.b #22
Mas night monkey	MODERN SPECIES	478	ARMC2 (ENSANAG00000027283)	ENSANAG00000023931	AFG1L (ENSANAG00000033061)	SNX3 (ENSANAG00000028701)	ENSANAG00000030536	NR2E1 (ENSANAG00000020325)	ENSANAG00000037950	ENSANAG00000019987	SEC63 (ENSANAG00000022108)	SCML4 (ENSANAG00000021645)	ENSANAG00000025986	SOBP (ENSANAG00000034007)	PDSS2 (ENSANAG00000015555)	BEND3 (ENSANAG00000021126)	ENSANAG00000037315	ENSANAG00000036990 #22	ENSANAG00000037838	ENSANAG00000003965	RTN4IP1 (ENSANAG00000037479)	CRYBG1 (ENSANAG00000023839)	ENSANAG00000027713	ATG5 (ENSANAG00000022796)	PRDM1 (ENSANAG00000030675)	ENSANAG00000024327	ENSANAG00000015673	POPDC3 (ENSANAG00000026735)	BVES (ENSANAG00000015115)	ENSANAG00000036677	HACE1 (ENSANAG00000037835)	ENSANAG00000019962	GRIK2 (ENSANAG00000000802)
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.u.a.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.u.a.b #22
Capuchin	MODERN SPECIES	623																ENSCCAG00000027696 #22	CBY3 (ENSCCAG00000031282)	CANX (ENSCCAG00000029294)	MAML1 (ENSCCAG00000028130)	LTC4S (ENSCCAG00000026797)	MGAT4B (ENSCCAG00000035998)	SQSTM1 (ENSCCAG00000034206)	MRNIP (ENSCCAG00000028973)	TBC1D9B (ENSCCAG00000033711)	RNF130 (ENSCCAG00000034314)	ENSCCAG00000026775	ENSCCAG00000028190	RASGEF1C (ENSCCAG00000024499)	MAPK9 (ENSCCAG00000038038)	ENSCCAG00000036076	GFPT2 (ENSCCAG00000030175)
Platyrrhini	ANCESTRAL SPECIES	133																ENSGT00940000155882.a.a.u.b #22	ENSGT00910000147473
Mas night monkey	MODERN SPECIES	805																ENSANAG00000023551 #22	TEKT1 (ENSANAG00000032769)	FBXO39 (ENSANAG00000032356)	XAF1 (ENSANAG00000038248)	SLC13A5 (ENSANAG00000022875)	EPX (ENSANAG00000020986)	MKS1 (ENSANAG00000032591)	LPO (ENSANAG00000026996)	MPO (ENSANAG00000022016)	TSPOAP1 (ENSANAG00000025244)	SUPT4H1 (ENSANAG00000026628)	ENSANAG00000025933	RNF43 (ENSANAG00000026242)	HSF5 (ENSANAG00000020700)	ENSANAG00000005062	MTMR4 (ENSANAG00000034239)
Cebidae	ANCESTRAL SPECIES	120																ENSGT00940000155882.a.a.u.b #22	ENSGT00910000147473
Cebidae_a	ANCESTRAL SPECIES	205																ENSGT00940000155882.a.a.u.b #22	ENSGT00910000147473
Bolivian squirrel monkey	MODERN SPECIES	104	MLXIPL (ENSSBOG00000026867)	TBL2 (ENSSBOG00000022863)	BCL7B (ENSSBOG00000019429)	BAZ1B (ENSSBOG00000029586)	FKBP6 (ENSSBOG00000031137) #8	TRIM50 (ENSSBOG00000020339) #9	NSUN5 (ENSSBOG00000028211) #10	ENSSBOG00000033580 #11	HIP1 (ENSSBOG00000025401) #12	CCL24 (ENSSBOG00000019900) #14	RHBDD2 (ENSSBOG00000027692) #15	POR (ENSSBOG00000022680) #16	TMEM120A (ENSSBOG00000031308) #17	STYXL1 (ENSSBOG00000025894) #18	MDH2 (ENSSBOG00000031689) #19	HSPB1 (ENSSBOG00000032223) #22	ENSSBOG00000031172	YWHAG (ENSSBOG00000020852) #23	SSC4D (ENSSBOG00000001146) #24	ENSSBOG00000025891 #25	DTX2 (ENSSBOG00000026278) #26	UPK3B (ENSSBOG00000020322) #27	ENSSBOG00000016148 #28	ENSSBOG00000023937 #29	ENSSBOG00000025579 #30	LRWD1 (ENSSBOG00000022476) #31	ALKBH4 (ENSSBOG00000028201) #32	ORAI2 (ENSSBOG00000033150) #33	PRKRIP1 (ENSSBOG00000026567) #34	SH2B2 (ENSSBOG00000027439) #35	CUX1 (ENSSBOG00000021031) #36
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.v #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.v #22
Marmoset	MODERN SPECIES	13	ENSCJAG00000022621	POU1F1 (ENSCJAG00000008810)	CHMP2B (ENSCJAG00000008842)	VGLL3 (ENSCJAG00000042898)	ENSCJAG00000080536	CADM2 (ENSCJAG00000008885)	ENSCJAG00000076865	ENSCJAG00000075727	GBE1 (ENSCJAG00000000191)	ENSCJAG00000064359	ROBO1 (ENSCJAG00000000145)	ENSCJAG00000075933	ENSCJAG00000066338	ENSCJAG00000087129	ENSCJAG00000086069	ENSCJAG00000080264 #22	ROBO2 (ENSCJAG00000000110)	ENSCJAG00000073097	LIPI (ENSCJAG00000003201)	RBM11 (ENSCJAG00000003218)	ENSCJAG00000043088	ENSCJAG00000003226	HSPA13 (ENSCJAG00000003284)	SAMSN1 (ENSCJAG00000003304)	ENSCJAG00000075782	ENSCJAG00000075584	NRIP1 (ENSCJAG00000077498)	ENSCJAG00000078261	ENSCJAG00000073422	ENSCJAG00000074340	USP25 (ENSCJAG00000003327)
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00910000147473	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000161467 #9	ENSGT00940000155974.j #10	ENSGT00940000167700	ENSGT00940000155974.i.a #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000154303.C.g	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34
Hominidae	ANCESTRAL SPECIES	26						ENSGT00910000146651.b	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34
Orangutan	MODERN SPECIES	20	ENSPPYG00000029529	ENSPPYG00000018289 #8	ENSPPYG00000018287	ENSPPYG00000017478 #11	ENSPPYG00000041563	ENSPPYG00000039911	HIP1 (ENSPPYG00000029731) #12	CCL26 (ENSPPYG00000017477) ##14	CCL24 (ENSPPYG00000037746) #14	RHBDD2 (ENSPPYG00000017475) #15	POR (ENSPPYG00000017474) #16	TMEM120A (ENSPPYG00000017473) #17	STYXL1 (ENSPPYG00000017472) #18	MDH2 (ENSPPYG00000017471) #19	SRRM3 (ENSPPYG00000017469) #20	HSPB1 (ENSPPYG00000029733) #22	YWHAG (ENSPPYG00000017468) #23	SSC4D (ENSPPYG00000017467) #24	ENSPPYG00000017466 #25	DTX2 (ENSPPYG00000017463) #26	UPK3B (ENSPPYG00000017462) #27	ENSPPYG00000041362 #28	ENSPPYG00000017459 #29	ENSPPYG00000017460	ENSPPYG00000040663	LRWD1 (ENSPPYG00000017458) #31	ALKBH4 (ENSPPYG00000038900) #32	ORAI2 (ENSPPYG00000017455) #33	PRKRIP1 (ENSPPYG00000017454) #34	SH2B2 (ENSPPYG00000017453) #35	ENSPPYG00000036039
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	36								ENSGT00390000006208.a.a	ENSGT00940000168291	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641.t.b #26	ENSGT00940000153392.b.b.b #27	ENSGT00900000141074.e.a.b.a.a.b	ENSGT00940000157641.t.a #26
Gorilla	MODERN SPECIES	20	ENSGGOG00000002980	ENSGGOG00000015742	NSUN5 (ENSGGOG00000011730) #10	ENSGGOG00000043878 #10	POM121C (ENSGGOG00000011716) #11	ENSGGOG00000041636	HIP1 (ENSGGOG00000016310) #12	ENSGGOG00000004845	RHBDD2 (ENSGGOG00000016935) #15	POR (ENSGGOG00000005876) #16	ENSGGOG00000041192	TMEM120A (ENSGGOG00000026408) #17	STYXL1 (ENSGGOG00000014256) #18	MDH2 (ENSGGOG00000011790) #19	ENSGGOG00000036497 #20	HSPB1 (ENSGGOG00000002700) #22	YWHAG (ENSGGOG00000024098) #23	SSC4D (ENSGGOG00000005447) #24	ENSGGOG00000005450 #25	ENSGGOG00000044035	ENSGGOG00000005455 #26	ENSGGOG00000005457 #27	ENSGGOG00000003930	ENSGGOG00000038950	ENSGGOG00000004519 #30	LRWD1 (ENSGGOG00000023543) #31	ALKBH4 (ENSGGOG00000000694) #32	ORAI2 (ENSGGOG00000016045) #33	PRKRIP1 (ENSGGOG00000007726) #34	ENSGGOG00000038097	ENSGGOG00000040701
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00910000147828	ENSGT00940000160014	ENSGT00940000162266	ENSGT00940000157317	ENSGT00390000006208.a.a	ENSGT00940000154173.A.a.c.a.b.a.a.a.a.b.a.b	ENSGT00940000153594.d.j #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b.i #25	ENSGT00940000157641.t.b #26	ENSGT00940000153392.b.b.b #27	ENSGT00900000141074.e.a.b.a.a.b	ENSGT00940000157641.t.a #26
Human	MODERN SPECIES	19	SPDYE13 (ENSG00000286038)	SPDYE14 (ENSG00000286137)	SPDYE15 (ENSG00000286014)	TRIM73 (ENSG00000178809)	POM121C (ENSG00000272391) #11	SPDYE5 (ENSG00000170092)	HIP1 (ENSG00000127946) #12	CCL26 (ENSG00000006606) ##14	CCL24 (ENSG00000106178) #14	RHBDD2 (ENSG00000005486) #15	POR (ENSG00000127948) #16	TMEM120A (ENSG00000189077) #17	STYXL1 (ENSG00000127952) #18	MDH2 (ENSG00000146701) #19	SRRM3 (ENSG00000177679) #20	HSPB1 (ENSG00000106211) #22	YWHAG (ENSG00000170027) #23	SSC4D (ENSG00000146700) #24	ZP3 (ENSG00000188372) #25	DTX2 (ENSG00000091073) #26	UPK3B (ENSG00000243566) #27	SPDYE16 (ENSG00000185040)	POMZP3 (ENSG00000146707) #25	SPDYE17 (ENSG00000186645)	SPDYE18 (ENSG00000205482)	CCDC146 (ENSG00000135205)	FGL2 (ENSG00000127951)	GSAP (ENSG00000186088)	PTPN12 (ENSG00000127947)	RSBN1L (ENSG00000187257)	TMEM60 (ENSG00000135211)
Pan	ANCESTRAL SPECIES	6	ENSGT00940000160940	ENSGT00940000159479	ENSGT00940000162262	ENSGT00940000160459	ENSGT00940000153313.C.a	ENSGT00940000153763.a	ENSGT00940000162674	ENSGT00940000153097.C	ENSGT00940000153097.A.f.b	ENSGT00950000182869.e.a.b.sb.b.a.a.b.a	ENSGT00940000153097.A.f.a.b.b.c	ENSGT00390000013859	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00910000147473	ENSGT00940000159855	ENSGT01030000234637.b.c	ENSGT00940000153629.a.b	ENSGT00940000158528	ENSGT00940000162529	ENSGT00390000015154	ENSGT00940000155657.db.a.a	ENSGT00940000154102.b	ENSGT00940000157503	ENSGT00720000108868	ENSGT00940000162057	ENSGT00940000158963	ENSGT00940000161689	ENSGT00950000182827.B
Bonobo	MODERN SPECIES	20	GTF2I (ENSPPAG00000033441)	ENSPPAG00000041734	NCF1 (ENSPPAG00000031779)	ENSPPAG00000031460	RCC1L (ENSPPAG00000030223)	CASTOR2 (ENSPPAG00000021721)	ENSPPAG00000027252	CCL26 (ENSPPAG00000042736) ##14	CCL24 (ENSPPAG00000028650) #14	RHBDD2 (ENSPPAG00000036662) #15	POR (ENSPPAG00000037718) #16	TMEM120A (ENSPPAG00000034408) #17	STYXL1 (ENSPPAG00000036397) #18	MDH2 (ENSPPAG00000033841) #19	ENSPPAG00000043377	HSPB1 (ENSPPAG00000037757) #22	ENSPPAG00000041078	ENSPPAG00000007420 #24	ZP3 (ENSPPAG00000041144) #25	CCDC146 (ENSPPAG00000043413)	FGL2 (ENSPPAG00000033593)	GSAP (ENSPPAG00000036092)	PTPN12 (ENSPPAG00000030029)	RSBN1L (ENSPPAG00000029764)	TMEM60 (ENSPPAG00000011899)	PHTF2 (ENSPPAG00000029964)	MAGI2 (ENSPPAG00000038074)	ENSPPAG00000032485	GNAI1 (ENSPPAG00000030334)	GNAT3 (ENSPPAG00000027521)	CD36 (ENSPPAG00000004914)
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	ENSPTRG00000028437	ENSPTRG00000051452 #35	ENSPTRG00000042965	ENSPTRG00000049529	ENSPTRG00000046923	HIP1 (ENSPTRG00000019307) #12	CCL26 (ENSPTRG00000019310) ##14	CCL24 (ENSPTRG00000019311) #14	RHBDD2 (ENSPTRG00000019312) #15	POR (ENSPTRG00000019313) #16	ENSPTRG00000048556 #17	STYXL1 (ENSPTRG00000019315) #18	MDH2 (ENSPTRG00000019316) #19	ENSPTRG00000048369	SRRM3 (ENSPTRG00000019317) #20	HSPB1 (ENSPTRG00000019319) #22	YWHAG (ENSPTRG00000019320) #23	ENSPTRG00000049175	SSC4D (ENSPTRG00000019322) #24	ZP3 (ENSPTRG00000019323) #25	DTX2 (ENSPTRG00000019326) #26	ENSPTRG00000045976	ENSPTRG00000019325 #27	ENSPTRG00000028524	ENSPTRG00000028525 #25	ENSPTRG00000045418	ENSPTRG00000045503 #26	ENSPTRG00000028444	ENSPTRG00000050917	ENSPTRG00000043322 #26	ENSPTRG00000052674
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044134	BMP15 (ENSPTRG00000021908)	SHROOM4 (ENSPTRG00000021905)	DGKK (ENSPTRG00000048026)	CCNB3 (ENSPTRG00000048758)	AKAP4 (ENSPTRG00000049957)	CLCN5 (ENSPTRG00000021899)	PAGE4 (ENSPTRG00000021896)	ENSPTRG00000021894	ENSPTRG00000045256	ENSPTRG00000048439	GAGE10 (ENSPTRG00000021892)	PPP1R3F (ENSPTRG00000046513)	FOXP3 (ENSPTRG00000021890)	CCDC22 (ENSPTRG00000021889)	ENSPTRG00000049813 #22	CACNA1F (ENSPTRG00000021888)	SYP (ENSPTRG00000021887)	PRICKLE3 (ENSPTRG00000045748)	PLP2 (ENSPTRG00000021885)	MAGIX (ENSPTRG00000047576)	GPKOW (ENSPTRG00000047603)	WDR45 (ENSPTRG00000021882)	CCDC120 (ENSPTRG00000021880)	TFE3 (ENSPTRG00000021879)	GRIPAP1 (ENSPTRG00000051549)	KCND1 (ENSPTRG00000021877)	OTUD5 (ENSPTRG00000021876)	PIM2 (ENSPTRG00000021875)	SLC35A2 (ENSPTRG00000021874)	PQBP1 (ENSPTRG00000021873)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00910000147473	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Vervet Monkey	MODERN SPECIES	20	BCL7B (ENSCSAG00000018171)	BAZ1B (ENSCSAG00000018168)	FZD9 (ENSCSAG00000019484) #7	TRIM50 (ENSCSAG00000018164) #9	NSUN5 (ENSCSAG00000018161) #10	ENSCSAG00000018159 #11	HIP1 (ENSCSAG00000018157) #12	CCL26 (ENSCSAG00000018155) ##14	CCL24 (ENSCSAG00000018154) #14	RHBDD2 (ENSCSAG00000018153) #15	POR (ENSCSAG00000018151) #16	TMEM120A (ENSCSAG00000018148) #17	STYXL1 (ENSCSAG00000018144) #18	MDH2 (ENSCSAG00000018142) #19	SRRM3 (ENSCSAG00000018140) #20	HSPB1 (ENSCSAG00000018137) #22	YWHAG (ENSCSAG00000018132) #23	SSC4D (ENSCSAG00000018128) #24	ENSCSAG00000018124 #25	DTX2 (ENSCSAG00000018121) #26	UPK3B (ENSCSAG00000018116) #27	ENSCSAG00000018113 #28	ENSCSAG00000018104 #29	ENSCSAG00000018092 #30	LRWD1 (ENSCSAG00000018089) #31	ALKBH4 (ENSCSAG00000018083) #32	ORAI2 (ENSCSAG00000018081) #33	PRKRIP1 (ENSCSAG00000018073) #34	SH2B2 (ENSCSAG00000018067) #35	CUX1 (ENSCSAG00000018062) #36	MYL10 (ENSCSAG00000018059) #37
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Cercopithecinae_b	ANCESTRAL SPECIES	36	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES	3	MRGPRD (ENSPANG00000039940)	IGHMBP2 (ENSPANG00000023650)	MRPL21 (ENSPANG00000018811)	CPT1A (ENSPANG00000020294)	TESMIN (ENSPANG00000013061)	ENSPANG00000043414	PPP6R3 (ENSPANG00000025892)	LRP5 (ENSPANG00000023602)	C11orf24 (ENSPANG00000023334)	ENSPANG00000003110	ENSPANG00000047861	CHKA (ENSPANG00000015385)	TCIRG1 (ENSPANG00000012975)	ALDH3B1 (ENSPANG00000010862)	UNC93B1 (ENSPANG00000025891)	ENSPANG00000049723 #22	ENSPANG00000046704	ACY3 (ENSPANG00000024740)	TBX10 (ENSPANG00000006501)	NUDT8 (ENSPANG00000009837)	ENSPANG00000008595	NDUFV1 (ENSPANG00000011236)	GSTP1 (ENSPANG00000004067)	CABP2 (ENSPANG00000026467)	CDK2AP2 (ENSPANG00000004749)	PITPNM1 (ENSPANG00000015330)	AIP (ENSPANG00000006615)	TMEM134 (ENSPANG00000007007)	CABP4 (ENSPANG00000011704)	GPR152 (ENSPANG00000012974)	CORO1B (ENSPANG00000015784)
Olive baboon	MODERN SPECIES	14	BCL7B (ENSPANG00000011064)	BAZ1B (ENSPANG00000021193)	FZD9 (ENSPANG00000019358) #7	CCL24 (ENSPANG00000022015) #14	CCL26 (ENSPANG00000021954) ##14	HIP1 (ENSPANG00000013801) #12	ENSPANG00000006896 #11	NSUN5 (ENSPANG00000018605) #10	TRIM50 (ENSPANG00000008677) #9	FKBP6 (ENSPANG00000010879) #8	TMEM120A (ENSPANG00000006929) #17	POR (ENSPANG00000018606) #16	RHBDD2 (ENSPANG00000007149) #15	MDH2 (ENSPANG00000017997) #19	SRRM3 (ENSPANG00000000776) #20	ENSPANG00000009241 #22	YWHAG (ENSPANG00000015907) #23	SSC4D (ENSPANG00000010486) #24	ENSPANG00000045364 #25	ENSPANG00000044109 #26	ENSPANG00000046110 #27	ENSPANG00000005835 #28	ENSPANG00000006303 #29	ENSPANG00000037618 #30	LRWD1 (ENSPANG00000026301) #31	ALKBH4 (ENSPANG00000039597) #32	ORAI2 (ENSPANG00000040031) #33	PRKRIP1 (ENSPANG00000005836) #34	ENSPANG00000046471	SH2B2 (ENSPANG00000024962) #35	CUX1 (ENSPANG00000016879) #36
Cercopithecinae_d	ANCESTRAL SPECIES	82	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Sooty mangabey	MODERN SPECIES	204	BAZ1B (ENSCATG00000039498)	FZD9 (ENSCATG00000005138) #7	FKBP6 (ENSCATG00000039896) #8	TRIM50 (ENSCATG00000030497) #9	NSUN5 (ENSCATG00000015253) #10	ENSCATG00000040581 #11	HIP1 (ENSCATG00000034444) #12	CCL26 (ENSCATG00000045354) ##14	CCL24 (ENSCATG00000041170) #14	RHBDD2 (ENSCATG00000034404) #15	POR (ENSCATG00000040584) #16	TMEM120A (ENSCATG00000040164) #17	STYXL1 (ENSCATG00000039290) #18	MDH2 (ENSCATG00000037325) #19	SRRM3 (ENSCATG00000043129) #20	HSPB1 (ENSCATG00000033687) #22	YWHAG (ENSCATG00000038855) #23	SSC4D (ENSCATG00000039464) #24	ENSCATG00000026904 #25	DTX2 (ENSCATG00000012083) #26	ENSCATG00000036369 #27	ENSCATG00000033062 #28	ENSCATG00000041124 #29	ENSCATG00000016595 #30	LRWD1 (ENSCATG00000031283) #31	ALKBH4 (ENSCATG00000040957) #32	ORAI2 (ENSCATG00000032429) #33	ENSCATG00000033173	PRKRIP1 (ENSCATG00000033703) #34	SH2B2 (ENSCATG00000036072) #35	CUX1 (ENSCATG00000027970) #36
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT00940000168291	ENSGT00940000165846 #13	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Pig-tailed macaque	MODERN SPECIES	194																HSPB1 (ENSMNEG00000015013) #22	YWHAG (ENSMNEG00000028080) #23	SSC4D (ENSMNEG00000032353) #24	ENSMNEG00000019906 #25	DTX2 (ENSMNEG00000035115) #26	ENSMNEG00000033743 #27	ENSMNEG00000009610 #28	ENSMNEG00000035704 #29	ENSMNEG00000035842 #30	LRWD1 (ENSMNEG00000040484) #31	ALKBH4 (ENSMNEG00000035155) #32	ENSMNEG00000044440	ORAI2 (ENSMNEG00000001555) #33	PRKRIP1 (ENSMNEG00000030860) #34	SH2B2 (ENSMNEG00000010853) #35	CUX1 (ENSMNEG00000040279) #36
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT00940000168291	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Rhesus	MODERN SPECIES	13	BAZ1B (ENSMMUG00000014270)	FZD9 (ENSMMUG00000047984) #7	ENSMMUG00000053080	FKBP6 (ENSMMUG00000052881) #8	TRIM50 (ENSMMUG00000022778) #9	NSUN5 (ENSMMUG00000022776) #10	ENSMMUG00000022772 #11	HIP1 (ENSMMUG00000005229) #12	CCL26 (ENSMMUG00000015735) ##14	CCL24 (ENSMMUG00000058798)	RHBDD2 (ENSMMUG00000007362) #15	POR (ENSMMUG00000020086) #16	STYXL1 (ENSMMUG00000020088) #18	MDH2 (ENSMMUG00000009917) #19	SRRM3 (ENSMMUG00000046728) #20	HSPB1 (ENSMMUG00000056744) #22	YWHAG (ENSMMUG00000058269) #23	SSC4D (ENSMMUG00000063778) #24	ZP3 (ENSMMUG00000003637) #25	DTX2 (ENSMMUG00000017570) #26	UPK3B (ENSMMUG00000047349) #27	ENSMMUG00000058360	ENSMMUG00000057993 #28	ENSMMUG00000030384 #29	ENSMMUG00000012019 #30	LRWD1 (ENSMMUG00000012021) #31	ALKBH4 (ENSMMUG00000050875) #32	ORAI2 (ENSMMUG00000012024) #33	ENSMMUG00000040332	PRKRIP1 (ENSMMUG00000059562) #34	SH2B2 (ENSMMUG00000010329) #35
Crab-eating macaque	MODERN SPECIES	13	BAZ1B (ENSMFAG00000030535)	FKBP6 (ENSMFAG00000002859) #8	ENSMFAG00000053242	TRIM50 (ENSMFAG00000030567) #9	NSUN5 (ENSMFAG00000037773) #10	ENSMFAG00000038324 #11	HIP1 (ENSMFAG00000038127) #12	CCL26 (ENSMFAG00000031524) ##14	ENSMFAG00000050864	RHBDD2 (ENSMFAG00000003041) #15	POR (ENSMFAG00000045209) #16	ENSMFAG00000031917 #18	MDH2 (ENSMFAG00000012605) #19	ENSMFAG00000053627	ENSMFAG00000054347	ENSMFAG00000051972 #22	ENSMFAG00000051870	ENSMFAG00000054655	YWHAG (ENSMFAG00000038574) #23	SSC4D (ENSMFAG00000031343) #24	ENSMFAG00000037043 #25	DTX2 (ENSMFAG00000037159) #26	UPK3B (ENSMFAG00000001010) #27	ENSMFAG00000045321 #28	ENSMFAG00000031907 #29	ENSMFAG00000039168 #30	LRWD1 (ENSMFAG00000032265) #31	ALKBH4 (ENSMFAG00000001499) #32	ORAI2 (ENSMFAG00000052103) #33	PRKRIP1 (ENSMFAG00000018168) #34	ENSMFAG00000057235
Rhinopithecus	DUPLICATION
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a.`b.a #22
Golden snub-nosed monkey	MODERN SPECIES	2945													ENSRROG00000029766	PLCZ1 (ENSRROG00000028279)	CAPZA3 (ENSRROG00000022483)	ENSRROG00000006432 #22	ENSRROG00000035528	PLEKHA5 (ENSRROG00000035927)
Black snub-nosed monkey	MODERN SPECIES	1896	BCL7B (ENSRBIG00000026371)	BAZ1B (ENSRBIG00000033638)	FZD9 (ENSRBIG00000019633) #7	FKBP6 (ENSRBIG00000043586) #8	TRIM50 (ENSRBIG00000035796) #9	NSUN5 (ENSRBIG00000031049) #10	ENSRBIG00000043695 #11	HIP1 (ENSRBIG00000036520) #12	CCL26 (ENSRBIG00000042021) ##14	CCL24 (ENSRBIG00000039545) #14	RHBDD2 (ENSRBIG00000030920) #15	POR (ENSRBIG00000027956) #16	TMEM120A (ENSRBIG00000036609) #17	STYXL1 (ENSRBIG00000034291) #18	ENSRBIG00000028019 #19	HSPB1 (ENSRBIG00000030065) #22	ENSRBIG00000037609	SSC4D (ENSRBIG00000039594) #24	ENSRBIG00000039055 #25	DTX2 (ENSRBIG00000033093) #26	ENSRBIG00000025649 #27	ENSRBIG00000028184 #28	ENSRBIG00000026196 #29	ENSRBIG00000042413	LRWD1 (ENSRBIG00000037181) #31	ALKBH4 (ENSRBIG00000040190) #32	ORAI2 (ENSRBIG00000042989) #33	ENSRBIG00000029335	PRKRIP1 (ENSRBIG00000015078) #34	SH2B2 (ENSRBIG00000029054) #35	CUX1 (ENSRBIG00000041277) #36
Rhinopithecus	ANCESTRAL SPECIES	57	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n.h.a #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.`b.b #22	ENSGT00910000147473	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00390000002643	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00910000148683	ENSGT00390000005003 #34
Golden snub-nosed monkey	MODERN SPECIES	2632	BAZ1B (ENSRROG00000035062)	FZD9 (ENSRROG00000034915) #7	FKBP6 (ENSRROG00000029764) #8	TRIM50 (ENSRROG00000036480) #9	NSUN5 (ENSRROG00000041917) #10	ENSRROG00000044906 #11	HIP1 (ENSRROG00000043117) #12	CCL26 (ENSRROG00000035529) ##14	CCL24 (ENSRROG00000044114) #14	ENSRROG00000004708	POR (ENSRROG00000040500) #16	TMEM120A (ENSRROG00000034774) #17	STYXL1 (ENSRROG00000041332) #18	ENSRROG00000030684 #19	SRRM3 (ENSRROG00000034980) #20	ENSRROG00000039764 #22	ENSRROG00000044238	YWHAG (ENSRROG00000034757) #23	SSC4D (ENSRROG00000040414) #24	ENSRROG00000005604 #25	DTX2 (ENSRROG00000026439) #26	UPK3B (ENSRROG00000031265) #27	ENSRROG00000028897 #28	ENSRROG00000029286 #29	ENSRROG00000037205	ENSRROG00000035578	LRWD1 (ENSRROG00000042471) #31	ALKBH4 (ENSRROG00000045199) #32	ORAI2 (ENSRROG00000030748) #33	ENSRROG00000039093	PRKRIP1 (ENSRROG00000043589) #34
Rhinopithecus	ANCESTRAL SPECIES	250											ENSGT00940000153097.A.f.a.b.a.a	ENSGT00940000153097.A.f.a.b.b	ENSGT00390000013859	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000155882.a.a.ab #22	ENSGT00940000159855	ENSGT01030000234637.b.c	ENSGT00940000153629.a.b	ENSGT00940000158528	ENSGT00940000162529	ENSGT00390000015154	ENSGT00940000155657.db.a.a	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503	ENSGT00720000108868	ENSGT00940000162057	ENSGT00940000158963	ENSGT00940000161689	ENSGT00950000182827.B
Black snub-nosed monkey	MODERN SPECIES	2181												ENSRBIG00000041245	PPP1R3F (ENSRBIG00000037051)	FOXP3 (ENSRBIG00000033932)	CCDC22 (ENSRBIG00000043124)	ENSRBIG00000030757 #22	CACNA1F (ENSRBIG00000041154)	SYP (ENSRBIG00000043090)	PRICKLE3 (ENSRBIG00000030867)	PLP2 (ENSRBIG00000036781)	MAGIX (ENSRBIG00000040127)	GPKOW (ENSRBIG00000027885)
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT00940000165846 #13	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155882.a.a #22
Hedgehog	MODERN SPECIES	11261																HSPB1 (ENSEEUG00000004519) #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Suina	ANCESTRAL SPECIES	31	ENSGT00390000002172.A.a	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g.o #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000155882.a.a #22	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35
Pig	MODERN SPECIES	11	FZD9 (ENSSSCG00000023004) #7	FKBP6 (ENSSSCG00000007702) #8	TRIM50 (ENSSSCG00000007703) #9	NSUN5 (ENSSSCG00000007704) #10	ENSSSCG00000007705 #11	HIP1 (ENSSSCG00000007700) #12	CCL26 (ENSSSCG00000039874) ##14	ENSSSCG00000035736 #14	RHBDD2 (ENSSSCG00000040182) #15	POR (ENSSSCG00000038320) #16	TMEM120A (ENSSSCG00000021837) #17	STYXL1 (ENSSSCG00000061894) #18	MDH2 (ENSSSCG00000025486) #19	SRRM3 (ENSSSCG00000032250) #20	ENSSSCG00000037567 #21	HSPB1 (ENSSSCG00000039962) #22	ENSSSCG00000007692 #23	SSC4D (ENSSSCG00000036391) #24	ZP3 (ENSSSCG00000007691) #25	DTX2 (ENSSSCG00000025430) #26	UPK3B (ENSSSCG00000057287) #27	ENSSSCG00000007695 #28	ENSSSCG00000027890 #29	ENSSSCG00000007688	LRWD1 (ENSSSCG00000007687) #31	ALKBH4 (ENSSSCG00000029300) #32	ORAI2 (ENSSSCG00000023912) #33	PRKRIP1 (ENSSSCG00000042324) #34	SH2B2 (ENSSSCG00000007682) #35	CUX1 (ENSSSCG00000007681) #36	MYL10 (ENSSSCG00000007680) #37
Chacoan peccary	MODERN SPECIES	893																HSPB1 (ENSCWAG00000013804) #22	ENSCWAG00000013841 #21	YWHAG (ENSCWAG00000013863) #23	SSC4D (ENSCWAG00000013895) #24	ENSCWAG00000013970 #25	DTX2 (ENSCWAG00000014057) #26	UPK3B (ENSCWAG00000014120) #27	ENSCWAG00000014170 #28	ENSCWAG00000014241 #29	ENSCWAG00000014596 #30	LRWD1 (ENSCWAG00000014632) #31	ALKBH4 (ENSCWAG00000014677) #32	ORAI2 (ENSCWAG00000014701) #33	PRKRIP1 (ENSCWAG00000014740) #34	SH2B2 (ENSCWAG00000014771) #35	ENSCWAG00000014972
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Camelidae	ANCESTRAL SPECIES	24	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000167838	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Alpaca	MODERN SPECIES	994																HSPB1 (ENSVPAG00000006230) #22
Arabian camel	MODERN SPECIES	9	BAZ1B (ENSCDRG00005005994)	FZD9 (ENSCDRG00005006087) #7	FKBP6 (ENSCDRG00005006101) #8	TRIM50 (ENSCDRG00005006130) #9	NSUN5 (ENSCDRG00005006151) #10	ENSCDRG00005006208 #11	HIP1 (ENSCDRG00005006305) #12	CCL26 (ENSCDRG00005007077) ##14	CCL24 (ENSCDRG00005007099) #14	RHBDD2 (ENSCDRG00005007130) #15	POR (ENSCDRG00005007180) #16	TMEM120A (ENSCDRG00005007235) #17	STYXL1 (ENSCDRG00005007340) #18	MDH2 (ENSCDRG00005007429) #19	ENSCDRG00005007647	HSPB1 (ENSCDRG00005007678) #22	ENSCDRG00005007727 #21	YWHAG (ENSCDRG00005007747) #23	SSC4D (ENSCDRG00005007778) #24	ENSCDRG00005007880 #25	DTX2 (ENSCDRG00005008002) #26	UPK3B (ENSCDRG00005008120) #27	ENSCDRG00005008168 #28	ENSCDRG00005008266 #29	ENSCDRG00005008509	LRWD1 (ENSCDRG00005008568) #31	ALKBH4 (ENSCDRG00005008717) #32	ORAI2 (ENSCDRG00005008771) #33	PRKRIP1 (ENSCDRG00005008819) #34	SH2B2 (ENSCDRG00005008869) #35	ENSCDRG00005009413
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00510000046985.h.b.a.a.b	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00510000046985.h.b.a.a.b	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.h #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00510000046985.h.b.a.a.b	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.h #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00510000046985.h.b.a.a.b	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.h #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00510000046985.h.b.a.a.b	ENSGT00950000183191.a.b #35	ENSGT00940000163742
Narwhal	MODERN SPECIES	299	FZD9 (ENSMMNG00015007202) #7	FKBP6 (ENSMMNG00015007242) #8	TRIM50 (ENSMMNG00015007311) #9	NSUN5 (ENSMMNG00015007334) #10	ENSMMNG00015007365 #11	HIP1 (ENSMMNG00015007504) #12	ENSMMNG00015007733 #13	CCL24 (ENSMMNG00015007743) #14	RHBDD2 (ENSMMNG00015007759) #15	POR (ENSMMNG00015007773) #16	TMEM120A (ENSMMNG00015007791) #17	STYXL1 (ENSMMNG00015007836) #18	ENSMMNG00015007868	MDH2 (ENSMMNG00015007898) #19	SRRM3 (ENSMMNG00015007952) #20	HSPB1 (ENSMMNG00015007972) #22	ENSMMNG00015007988 #23	SSC4D (ENSMMNG00015008008) #24	ENSMMNG00015008040 #25	DTX2 (ENSMMNG00015008081) #26	UPK3B (ENSMMNG00015008127) #27	ENSMMNG00015008152 #28	ENSMMNG00015008186 #29	ENSMMNG00015008232 #30	LRWD1 (ENSMMNG00015008250) #31	ALKBH4 (ENSMMNG00015008268) #32	ORAI2 (ENSMMNG00015008276) #33	PRKRIP1 (ENSMMNG00015008287) #34	ENSMMNG00015008301	SH2B2 (ENSMMNG00015008363) #35	CUX1 (ENSMMNG00015008423) #36
Beluga whale	MODERN SPECIES	48	FZD9 (ENSDLEG00000007460) #7	FKBP6 (ENSDLEG00000007476) #8	TRIM50 (ENSDLEG00000007536) #9	NSUN5 (ENSDLEG00000007548) #10	ENSDLEG00000007556 #11	HIP1 (ENSDLEG00000007572) #12	CCL26 (ENSDLEG00000007599) ##14	CCL24 (ENSDLEG00000007617) #14	RHBDD2 (ENSDLEG00000007624) #15	POR (ENSDLEG00000007643) #16	TMEM120A (ENSDLEG00000007681) #17	STYXL1 (ENSDLEG00000007722) #18	TMEM120A (ENSDLEG00000007738) #17	MDH2 (ENSDLEG00000007770) #19	SRRM3 (ENSDLEG00000007784) #20	HSPB1 (ENSDLEG00000007796) #22	YWHAG (ENSDLEG00000007802) #23	SSC4D (ENSDLEG00000007805) #24	ENSDLEG00000007811 #25	DTX2 (ENSDLEG00000007815) #26	UPK3B (ENSDLEG00000007823) #27	ENSDLEG00000007825 #28	ENSDLEG00000007839 #29	ENSDLEG00000007844	LRWD1 (ENSDLEG00000007847) #31	ALKBH4 (ENSDLEG00000007852) #32	ORAI2 (ENSDLEG00000007854) #33	ENSDLEG00000007857	ENSDLEG00000007859 #34	SH2B2 (ENSDLEG00000007865) #35	ENSDLEG00000007873
Vaquita	MODERN SPECIES	6	FZD9 (ENSPSNG00000004730) #7	FKBP6 (ENSPSNG00000004777) #8	TRIM50 (ENSPSNG00000004848) #9	NSUN5 (ENSPSNG00000004889) #10	ENSPSNG00000004930 #11	HIP1 (ENSPSNG00000005032) #12	ENSPSNG00000005162 ##14	ENSPSNG00000005191 ##14	ENSPSNG00000005207	RHBDD2 (ENSPSNG00000005234) #15	POR (ENSPSNG00000005280) #16	TMEM120A (ENSPSNG00000005330) #17	STYXL1 (ENSPSNG00000005374) #18	MDH2 (ENSPSNG00000005477) #19	SRRM3 (ENSPSNG00000005552) #20	HSPB1 (ENSPSNG00000005660) #22	ENSPSNG00000005683 #23	SSC4D (ENSPSNG00000005784) #24	ENSPSNG00000005841 #25	DTX2 (ENSPSNG00000005958) #26	UPK3B (ENSPSNG00000006037) #27	ENSPSNG00000006063 #28	ENSPSNG00000006142 #29	ENSPSNG00000006323 #30	LRWD1 (ENSPSNG00000006367) #31	ALKBH4 (ENSPSNG00000006431) #32	ORAI2 (ENSPSNG00000006459) #33	PRKRIP1 (ENSPSNG00000006487) #34	SH2B2 (ENSPSNG00000006530) #35	CUX1 (ENSPSNG00000006665) #36	ENSPSNG00000006892
Sperm whale	MODERN SPECIES	687																HSPB1 (ENSPCTG00005016098) #22
Blue whale	MODERN SPECIES	6	TRIM50 (ENSBMSG00010020388) #9	NSUN5 (ENSBMSG00010020440) #10	ENSBMSG00010020459	ENSBMSG00010020565 #11	HIP1 (ENSBMSG00010020694) #12	CCL26 (ENSBMSG00010020754) ##14	CCL24 (ENSBMSG00010020765) #14	ENSBMSG00010020780	ENSBMSG00010020785	RHBDD2 (ENSBMSG00010020799) #15	POR (ENSBMSG00010020837) #16	TMEM120A (ENSBMSG00010020877) #17	STYXL1 (ENSBMSG00010020907) #18	MDH2 (ENSBMSG00010020971) #19	SRRM3 (ENSBMSG00010021008) #20	HSPB1 (ENSBMSG00010021026) #22	ENSBMSG00010010240 #23	SSC4D (ENSBMSG00010010259) #24	ENSBMSG00010010284 #25	DTX2 (ENSBMSG00010010318) #26	UPK3B (ENSBMSG00010010349) #27	ENSBMSG00010010361 #28	ENSBMSG00010010375 #29	ENSBMSG00010010392 #30	LRWD1 (ENSBMSG00010010398) #31	ALKBH4 (ENSBMSG00010010417) #32	ORAI2 (ENSBMSG00010010431) #33	PRKRIP1 (ENSBMSG00010010444) #34	ENSBMSG00010010447	SH2B2 (ENSBMSG00010010465) #35	ENSBMSG00010010523
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Yarkand deer	MODERN SPECIES	1	FZD9 (ENSCHYG00000007596) #7	FKBP6 (ENSCHYG00000007611) #8	TRIM50 (ENSCHYG00000007672) #9	NSUN5 (ENSCHYG00000007719) #10	ENSCHYG00000007852 #11	HIP1 (ENSCHYG00000007971) #12	CCL26 (ENSCHYG00000008944) ##14	CCL24 (ENSCHYG00000008989) #14	RHBDD2 (ENSCHYG00000009049) #15	POR (ENSCHYG00000009175) #16	TMEM120A (ENSCHYG00000009508) #17	MDH2 (ENSCHYG00000009638) #19	STYXL1 (ENSCHYG00000010002) #18	ENSCHYG00000010130 #20	ENSCHYG00000010261 #21	HSPB1 (ENSCHYG00000010300) #22	YWHAG (ENSCHYG00000010355) #23	SSC4D (ENSCHYG00000010386) #24	ENSCHYG00000010443 #25	DTX2 (ENSCHYG00000010555) #26	ENSCHYG00000010741 #27	ENSCHYG00000010859 #28	ENSCHYG00000010941 #29	ENSCHYG00000011285 #30	LRWD1 (ENSCHYG00000011346) #31	ALKBH4 (ENSCHYG00000011480) #32	ENSCHYG00000011515 #33	PRKRIP1 (ENSCHYG00000011536) #34	ENSCHYG00000011593	SH2B2 (ENSCHYG00000011645) #35	CUX1 (ENSCHYG00000011886) #36
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Siberian musk deer	MODERN SPECIES	212	FZD9 (ENSMMSG00000005279) #7	FKBP6 (ENSMMSG00000005318) #8	TRIM50 (ENSMMSG00000005458) #9	NSUN5 (ENSMMSG00000005556) #10	ENSMMSG00000005655 #11	HIP1 (ENSMMSG00000005780) #12	CCL26 (ENSMMSG00000006147) ##14	CCL24 (ENSMMSG00000006164) #14	RHBDD2 (ENSMMSG00000006190) #15	POR (ENSMMSG00000006224) #16	TMEM120A (ENSMMSG00000006265) #17	STYXL1 (ENSMMSG00000006312) #18	MDH2 (ENSMMSG00000006639) #19	SRRM3 (ENSMMSG00000006760) #20	ENSMMSG00000006824 #21	HSPB1 (ENSMMSG00000006863) #22	YWHAG (ENSMMSG00000006910) #23	SSC4D (ENSMMSG00000006936) #24	ENSMMSG00000006973 #25	DTX2 (ENSMMSG00000007072) #26	UPK3B (ENSMMSG00000007185) #27	ENSMMSG00000007242 #28	ENSMMSG00000007309 #29	ENSMMSG00000007415 #30	LRWD1 (ENSMMSG00000007437) #31	ALKBH4 (ENSMMSG00000007522) #32	ENSMMSG00000007542 #33	ENSMMSG00000007562 #34	SH2B2 (ENSMMSG00000007624) #35	ENSMMSG00000007787	ENSMMSG00000008113 #36
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00910000148262	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Goat	MODERN SPECIES	17	ENSCHIG00000021367	ENSCHIG00000011766	ENSCHIG00000013479	ENSCHIG00000025047	ENSCHIG00000017633	ENSCHIG00000026436	ENSCHIG00000024978	ENSCHIG00000010097	ENSCHIG00000010141	ENSCHIG00000023666 #16	TMEM120A (ENSCHIG00000023234) #17	STYXL1 (ENSCHIG00000024571) #18	MDH2 (ENSCHIG00000024287) #19	SRRM3 (ENSCHIG00000014018) #20	ENSCHIG00000018001 #21	HSPB1 (ENSCHIG00000015975) #22	YWHAG (ENSCHIG00000025558) #23	SSC4D (ENSCHIG00000026419) #24	ENSCHIG00000021820 #25	DTX2 (ENSCHIG00000013883) #26	UPK3B (ENSCHIG00000026660) #27	ENSCHIG00000014152 #28	ENSCHIG00000026723 #29	ENSCHIG00000009008	LRWD1 (ENSCHIG00000020073) #31	ALKBH4 (ENSCHIG00000020179) #32	ORAI2 (ENSCHIG00000010053) #33	PRKRIP1 (ENSCHIG00000023221) #34	SH2B2 (ENSCHIG00000015376) #35	CUX1 (ENSCHIG00000009047) #36	MYL10 (ENSCHIG00000024911) #37
Rambouillet Sheep	MODERN SPECIES	16	BAZ1B (ENSOARG00020022456)	FZD9 (ENSOARG00020022514) #7	FKBP6 (ENSOARG00020022533) #8	TRIM50 (ENSOARG00020022634) #9	NSUN5 (ENSOARG00020022737) #10	HIP1 (ENSOARG00020023068) #12	CCL26 (ENSOARG00020023401) ##14	ENSOARG00020023419	CCL24 (ENSOARG00020023433) #14	RHBDD2 (ENSOARG00020023460) #15	POR (ENSOARG00020023488) #16	TMEM120A (ENSOARG00020023534) #17	STYXL1 (ENSOARG00020023564) #18	MDH2 (ENSOARG00020023712) #19	SRRM3 (ENSOARG00020023768) #20	HSPB1 (ENSOARG00020023827) #22	YWHAG (ENSOARG00020023843) #23	SSC4D (ENSOARG00020023863) #24	ENSOARG00020023895 #25	DTX2 (ENSOARG00020023954) #26	UPK3B (ENSOARG00020023993) #27	ENSOARG00020024015 #28	ENSOARG00020024045 #29	ENSOARG00020024108 #30	LRWD1 (ENSOARG00020024131) #31	ALKBH4 (ENSOARG00020024193) #32	ORAI2 (ENSOARG00020024205) #33	PRKRIP1 (ENSOARG00020024226) #34	SH2B2 (ENSOARG00020024254) #35	CUX1 (ENSOARG00020024286) #36	MYL10 (ENSOARG00020024505) #37
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00510000047245.w.b	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
American bison	MODERN SPECIES	3254	FKBP6 (ENSBBBG00000011713) #8	TRIM50 (ENSBBBG00000002156) #9	NSUN5 (ENSBBBG00000008491) #10	ENSBBBG00000011652 #11	HIP1 (ENSBBBG00000002125) #12	CCL26 (ENSBBBG00000011486) ##14	ENSBBBG00000007351	CCL24 (ENSBBBG00000011473) #14	RHBDD2 (ENSBBBG00000011465) #15	POR (ENSBBBG00000011448) #16	TMEM120A (ENSBBBG00000011434) #17	STYXL1 (ENSBBBG00000007247) #18	MDH2 (ENSBBBG00000007350) #19	SRRM3 (ENSBBBG00000002063) #20	ENSBBBG00000002060 #21	HSPB1 (ENSBBBG00000011350) #22	YWHAG (ENSBBBG00000011348) #23	SSC4D (ENSBBBG00000007590) #24	ENSBBBG00000011326 #25	DTX2 (ENSBBBG00000011314) #26	UPK3B (ENSBBBG00000011306) #27	ENSBBBG00000011301 #28	ENSBBBG00000011289 #29	ENSBBBG00000011251 #30	LRWD1 (ENSBBBG00000002049) #31	ALKBH4 (ENSBBBG00000011227) #32	ORAI2 (ENSBBBG00000002043) #33	PRKRIP1 (ENSBBBG00000011211) #34	ENSBBBG00000011199	SH2B2 (ENSBBBG00000007349) #35	CUX1 (ENSBBBG00000011123) #36
Bos	ANCESTRAL SPECIES	9	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00510000047245.w.b	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974.g #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00510000047245.w.b	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Hybrid Bos Indicus	MODERN SPECIES	17	BCL7B (ENSBIXG00005009697)	BAZ1B (ENSBIXG00005009733)	FKBP6 (ENSBIXG00005009809) #8	TRIM50 (ENSBIXG00005009839) #9	NSUN5 (ENSBIXG00005000641) #10	ENSBIXG00005009874 #11	HIP1 (ENSBIXG00005009945) #12	CCL26 (ENSBIXG00005009970) ##14	CCL24 (ENSBIXG00005000728) #14	RHBDD2 (ENSBIXG00005010007) #15	POR (ENSBIXG00005000780) #16	TMEM120A (ENSBIXG00005007425) #17	STYXL1 (ENSBIXG00005010244) #18	MDH2 (ENSBIXG00005010300) #19	SRRM3 (ENSBIXG00005007426) #20	HSPB1 (ENSBIXG00005005473) #22	ENSBIXG00005010365 #21	YWHAG (ENSBIXG00005005698) #23	SSC4D (ENSBIXG00005000868) #24	ENSBIXG00005000733 #25	ENSBIXG00005010462	DTX2 (ENSBIXG00005010564) #26	UPK3B (ENSBIXG00005010658) #27	ENSBIXG00005006318 #28	ENSBIXG00005010730 #29	ENSBIXG00005010770 #30	LRWD1 (ENSBIXG00005000945) #31	ALKBH4 (ENSBIXG00005010801) #32	ORAI2 (ENSBIXG00005010862) #33	ENSBIXG00005010875	ENSBIXG00005010897 #34
Cow	MODERN SPECIES	17	FZD9 (ENSBTAG00000051341) #7	FKBP6 (ENSBTAG00000002253) #8	TRIM50 (ENSBTAG00000005798) #9	NSUN5 (ENSBTAG00000017941) #10	ENSBTAG00000017939 #11	HIP1 (ENSBTAG00000000781) #12	CCL26 (ENSBTAG00000052510) ##14	CCL24 (ENSBTAG00000026275) #14	RHBDD2 (ENSBTAG00000005089) #15	POR (ENSBTAG00000017082) #16	TMEM120A (ENSBTAG00000016139) #17	STYXL1 (ENSBTAG00000009461) #18	MDH2 (ENSBTAG00000009462) #19	SRRM3 (ENSBTAG00000007879) #20	ENSBTAG00000050791 #21	HSPB1 (ENSBTAG00000011969) #22	YWHAG (ENSBTAG00000004077) #23	SSC4D (ENSBTAG00000003020) #24	ZP3 (ENSBTAG00000014834) #25	DTX2 (ENSBTAG00000001470) #26	UPK3B (ENSBTAG00000021430) #27	UPK3BL1 (ENSBTAG00000020524) #28	ENSBTAG00000005448 #29	POLR2J (ENSBTAG00000005446)	LRWD1 (ENSBTAG00000014742) #31	ALKBH4 (ENSBTAG00000003617) #32	ORAI2 (ENSBTAG00000012050) #33	PRKRIP1 (ENSBTAG00000004106) #34	ENSBTAG00000047266	SH2B2 (ENSBTAG00000009691) #35	CUX1 (ENSBTAG00000010659) #36
Bos_a	ANCESTRAL SPECIES	41	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003.k.a #34	ENSGT00510000047245.w.b	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Wild yak	MODERN SPECIES	514	BAZ1B (ENSBMUG00000008011)	FZD9 (ENSBMUG00000007985) #7	FKBP6 (ENSBMUG00000007971) #8	TRIM50 (ENSBMUG00000007919) #9	NSUN5 (ENSBMUG00000007901) #10	ENSBMUG00000007879 #11	HIP1 (ENSBMUG00000007836) #12	CCL26 (ENSBMUG00000007777) ##14	CCL24 (ENSBMUG00000007774) #14	ENSBMUG00000007768 #15	ENSBMUG00000007762 #15	POR (ENSBMUG00000007740) #16	TMEM120A (ENSBMUG00000007707) #17	STYXL1 (ENSBMUG00000007689) #18	MDH2 (ENSBMUG00000007674) #19	HSPB1 (ENSBMUG00000007650) #22	ENSBMUG00000007646 #21	YWHAG (ENSBMUG00000007630) #23	SSC4D (ENSBMUG00000007600) #24	ENSBMUG00000007597 #25	DTX2 (ENSBMUG00000007541) #26	ENSBMUG00000007531 #27	ENSBMUG00000007523 #28	ENSBMUG00000007487 #29	ENSBMUG00000007441 #30	LRWD1 (ENSBMUG00000007433) #31	ALKBH4 (ENSBMUG00000007423) #32	ORAI2 (ENSBMUG00000007417) #33	PRKRIP1 (ENSBMUG00000007400) #34	ENSBMUG00000007395	SH2B2 (ENSBMUG00000007390) #35
Domestic yak	MODERN SPECIES	18	FKBP6 (ENSBGRG00000010618) #8	TRIM50 (ENSBGRG00000010461) #9	ENSBGRG00000010437	NSUN5 (ENSBGRG00000010301) #10	ENSBGRG00000010238 #11	HIP1 (ENSBGRG00000009451) #12	CCL26 (ENSBGRG00000009396) ##14	CCL24 (ENSBGRG00000009380) #14	RHBDD2 (ENSBGRG00000009317) #15	POR (ENSBGRG00000009108) #16	TMEM120A (ENSBGRG00000008998) #17	STYXL1 (ENSBGRG00000008791) #18	MDH2 (ENSBGRG00000008546) #19	SRRM3 (ENSBGRG00000008480) #20	ENSBGRG00000008438 #21	ENSBGRG00000008398 #22	YWHAG (ENSBGRG00000008359) #23	SSC4D (ENSBGRG00000008300) #24	ENSBGRG00000008198 #25	DTX2 (ENSBGRG00000008036) #26	UPK3B (ENSBGRG00000007877) #27	ENSBGRG00000007795 #28	ENSBGRG00000007176 #29	ENSBGRG00000007071	LRWD1 (ENSBGRG00000007003) #31	ALKBH4 (ENSBGRG00000026012) #32	ORAI2 (ENSBGRG00000026010) #33	ENSBGRG00000026003	PRKRIP1 (ENSBGRG00000025984) #34	ENSBGRG00000025979	SH2B2 (ENSBGRG00000025971) #35
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Chiroptera	ANCESTRAL SPECIES	37	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00940000168291	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Microchiroptera	ANCESTRAL SPECIES	39	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742
Microbat	MODERN SPECIES	982	BCL7B (ENSMLUG00000010848)	BAZ1B (ENSMLUG00000009860)	FZD9 (ENSMLUG00000025470) #7	FKBP6 (ENSMLUG00000009844) #8	TRIM50 (ENSMLUG00000005136) #9	NSUN5 (ENSMLUG00000008380) #10	ENSMLUG00000008393 #11	ENSMLUG00000005138 #12	CCL26 (ENSMLUG00000016256) ##14	RHBDD2 (ENSMLUG00000016259) #15	TMEM120A (ENSMLUG00000017793) #17	POR (ENSMLUG00000017792) #16	STYXL1 (ENSMLUG00000017794) #18	MDH2 (ENSMLUG00000017795) #19	ENSMLUG00000015645	HSPB1 (ENSMLUG00000015659) #22	YWHAG (ENSMLUG00000015669) #23	ENSMLUG00000006297 #24	ENSMLUG00000006303 #25	DTX2 (ENSMLUG00000006309) #26	UPK3B (ENSMLUG00000006318) #27	ENSMLUG00000024981 #28	ENSMLUG00000010481 #29	ENSMLUG00000010467 #30	LRWD1 (ENSMLUG00000010445) #31	ALKBH4 (ENSMLUG00000010443) #32	ORAI2 (ENSMLUG00000010439) #33	PRKRIP1 (ENSMLUG00000006081) #34	SH2B2 (ENSMLUG00000007328) #35	CUX1 (ENSMLUG00000007264) #36	MYL10 (ENSMLUG00000014418) #37
Greater horseshoe bat	MODERN SPECIES	25	FKBP6 (ENSRFEG00010009281) #8	TRIM50 (ENSRFEG00010009207) #9	NSUN5 (ENSRFEG00010009133) #10	ENSRFEG00010009080 #11	ENSRFEG00010009041	HIP1 (ENSRFEG00010008715) #12	CCL26 (ENSRFEG00010008687) ##14	CCL24 (ENSRFEG00010008667) #14	ENSRFEG00010008629	RHBDD2 (ENSRFEG00010008574) #15	POR (ENSRFEG00010008501) #16	TMEM120A (ENSRFEG00010008404) #17	STYXL1 (ENSRFEG00010008322) #18	MDH2 (ENSRFEG00010008232) #19	SRRM3 (ENSRFEG00010008153) #20	HSPB1 (ENSRFEG00010008105) #22	SSC4D (ENSRFEG00010007978) #24	ENSRFEG00010007778 #25	DTX2 (ENSRFEG00010007625) #26	UPK3B (ENSRFEG00010007571) #27	ENSRFEG00010007504 #28	ENSRFEG00010007411 #29	ENSRFEG00010007363	LRWD1 (ENSRFEG00010007300) #31	ALKBH4 (ENSRFEG00010007264) #32	ORAI2 (ENSRFEG00010007226) #33	PRKRIP1 (ENSRFEG00010007192) #34	SH2B2 (ENSRFEG00010007104) #35	ENSRFEG00010007064 #36	ENSRFEG00010006858	MYL10 (ENSRFEG00010006751) #37
Megabat	MODERN SPECIES	416											POR (ENSPVAG00000003393) #16	TMEM120A (ENSPVAG00000003395) #17	STYXL1 (ENSPVAG00000003396) #18	MDH2 (ENSPVAG00000003397) #19	SRRM3 (ENSPVAG00000003400) #20	HSPB1 (ENSPVAG00000003403) #22	YWHAG (ENSPVAG00000003404) #23	SSC4D (ENSPVAG00000003405) #24	ENSPVAG00000003406 #25	DTX2 (ENSPVAG00000003407) #26	ENSPVAG00000003408 #27
Equus	ANCESTRAL SPECIES	22	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Horse	MODERN SPECIES	4	FZD9 (ENSECAG00000057726) #7	FKBP6 (ENSECAG00000017859) #8	TRIM50 (ENSECAG00000014578) #9	NSUN5 (ENSECAG00000012138) #10	ENSECAG00000044336	ENSECAG00000000464 #11	HIP1 (ENSECAG00000022880) #12	CCL26 (ENSECAG00000022659) ##14	CCL24 (ENSECAG00000032357) #14	RHBDD2 (ENSECAG00000021173) #15	POR (ENSECAG00000008755) #16	TMEM120A (ENSECAG00000024209) #17	STYXL1 (ENSECAG00000019261) #18	MDH2 (ENSECAG00000023094) #19	SRRM3 (ENSECAG00000022142) #20	HSPB1 (ENSECAG00000020463) #22	YWHAG (ENSECAG00000006452) #23	SSC4D (ENSECAG00000020258) #24	ENSECAG00000008731 #25	DTX2 (ENSECAG00000018425) #26	ENSECAG00000016572 #28	ENSECAG00000023942 #29	LRWD1 (ENSECAG00000017382) #31	ALKBH4 (ENSECAG00000033173) #32	ORAI2 (ENSECAG00000046959) #33	PRKRIP1 (ENSECAG00000053672) #34	SH2B2 (ENSECAG00000024201) #35	CUX1 (ENSECAG00000022645) #36	MYL10 (ENSECAG00000022094) #37	COL26A1 (ENSECAG00000021392)	IFT22 (ENSECAG00000019190)
Donkey	MODERN SPECIES	5	FZD9 (ENSEASG00005016111) #7	FKBP6 (ENSEASG00005016112) #8	TRIM50 (ENSEASG00005016113) #9	NSUN5 (ENSEASG00005016116) #10	ENSEASG00005016117 #11	HIP1 (ENSEASG00005016140) #12	CCL26 (ENSEASG00005036959) ##14	CCL24 (ENSEASG00005030346) #14	RHBDD2 (ENSEASG00005016240) #15	POR (ENSEASG00005016825) #16	TMEM120A (ENSEASG00005016831) #17	STYXL1 (ENSEASG00005016834) #18	MDH2 (ENSEASG00005016836) #19	SRRM3 (ENSEASG00005027819) #20	ENSEASG00005016843 #21	HSPB1 (ENSEASG00005016846) #22	YWHAG (ENSEASG00005023788) #23	SSC4D (ENSEASG00005016848) #24	ENSEASG00005016852 #25	DTX2 (ENSEASG00005016853) #26	ENSEASG00005016855 #27	ENSEASG00005016857 #28	ENSEASG00005016860 #29	ENSEASG00005029763 #30	LRWD1 (ENSEASG00005016865) #31	ALKBH4 (ENSEASG00005030978) #32	ORAI2 (ENSEASG00005016875) #33	SH2B2 (ENSEASG00005016877) #35	CUX1 (ENSEASG00005016883) #36	MYL10 (ENSEASG00005016896) #37	COL26A1 (ENSEASG00005016899)
Carnivora	ANCESTRAL SPECIES	12	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Felidae	ANCESTRAL SPECIES	19	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Panthera	ANCESTRAL SPECIES	27	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Panthera_a	ANCESTRAL SPECIES	27	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
leopard	MODERN SPECIES	87	FZD9 (ENSPPRG00000018604) #7	FKBP6 (ENSPPRG00000010002) #8	TRIM50 (ENSPPRG00000011493) #9	NSUN5 (ENSPPRG00000014831) #10	ENSPPRG00000019062 #11	HIP1 (ENSPPRG00000000644) #12	CCL26 (ENSPPRG00000000877) ##14	CCL24 (ENSPPRG00000001397) #14	RHBDD2 (ENSPPRG00000002060) #15	POR (ENSPPRG00000003299) #16	TMEM120A (ENSPPRG00000003705) #17	STYXL1 (ENSPPRG00000004414) #18	MDH2 (ENSPPRG00000005519) #19	SRRM3 (ENSPPRG00000006254) #20	ENSPPRG00000006410 #21	HSPB1 (ENSPPRG00000006691) #22	YWHAG (ENSPPRG00000006886) #23	SSC4D (ENSPPRG00000006956) #24	ENSPPRG00000007269 #25	DTX2 (ENSPPRG00000008220) #26	UPK3B (ENSPPRG00000008594) #27	ENSPPRG00000008816 #28	ENSPPRG00000011814 #29	ENSPPRG00000012439 #30	LRWD1 (ENSPPRG00000013862) #31	ALKBH4 (ENSPPRG00000014323) #32	ORAI2 (ENSPPRG00000014680) #33	PRKRIP1 (ENSPPRG00000015558) #34	SH2B2 (ENSPPRG00000016868) #35	ENSPPRG00000023103	MYL10 (ENSPPRG00000000091) #37
lion	MODERN SPECIES	16	BAZ1B (ENSPLOG00000022126)	FZD9 (ENSPLOG00000022143) #7	FKBP6 (ENSPLOG00000022160) #8	TRIM50 (ENSPLOG00000022179) #9	NSUN5 (ENSPLOG00000022196) #10	ENSPLOG00000022209 #11	HIP1 (ENSPLOG00000022266) #12	CCL26 (ENSPLOG00000022313) ##14	CCL24 (ENSPLOG00000022317) #14	RHBDD2 (ENSPLOG00000022320) #15	POR (ENSPLOG00000022328) #16	TMEM120A (ENSPLOG00000022339) #17	STYXL1 (ENSPLOG00000022352) #18	MDH2 (ENSPLOG00000022364) #19	SRRM3 (ENSPLOG00000022376) #20	HSPB1 (ENSPLOG00000022383) #22	YWHAG (ENSPLOG00000022393) #23	SSC4D (ENSPLOG00000022400) #24	ENSPLOG00000022419 #25	DTX2 (ENSPLOG00000022428) #26	UPK3B (ENSPLOG00000022437) #27	ENSPLOG00000011434 #28	ENSPLOG00000011541 #29	ENSPLOG00000011598 #30	LRWD1 (ENSPLOG00000011648) #31	ALKBH4 (ENSPLOG00000011710) #32	ORAI2 (ENSPLOG00000011756) #33	PRKRIP1 (ENSPLOG00000011794) #34	SH2B2 (ENSPLOG00000011878) #35	CUX1 (ENSPLOG00000012063) #36	MYL10 (ENSPLOG00000012371) #37
Cat	MODERN SPECIES	247	FZD9 (ENSFCAG00000012671) #7	FKBP6 (ENSFCAG00000012669) #8	TRIM50 (ENSFCAG00000012668) #9	NSUN5 (ENSFCAG00000012667) #10	ENSFCAG00000024396 #11	HIP1 (ENSFCAG00000004047) #12	CCL26 (ENSFCAG00000043014) ##14	CCL24 (ENSFCAG00000023127) #14	RHBDD2 (ENSFCAG00000028636) #15	POR (ENSFCAG00000000597) #16	TMEM120A (ENSFCAG00000000598) #17	STYXL1 (ENSFCAG00000028786) #18	MDH2 (ENSFCAG00000000600) #19	SRRM3 (ENSFCAG00000044112) #20	ENSFCAG00000041210 #21	HSPB1 (ENSFCAG00000031543) #22	YWHAG (ENSFCAG00000001330) #23	SSC4D (ENSFCAG00000018493) #24	ZP3 (ENSFCAG00000013474) #25	DTX2 (ENSFCAG00000013477) #26	UPK3B (ENSFCAG00000013478) #27	ENSFCAG00000024975 #28	ENSFCAG00000000379 #29	ENSFCAG00000000377 #30	LRWD1 (ENSFCAG00000000376) #31	ALKBH4 (ENSFCAG00000023915) #32	ORAI2 (ENSFCAG00000030812) #33	SH2B2 (ENSFCAG00000028777) #35	CUX1 (ENSFCAG00000034298) #36	MYL10 (ENSFCAG00000018080) #37	COL26A1 (ENSFCAG00000008073)
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Canidae	ANCESTRAL SPECIES	3	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n.b #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n.b.b #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00550000074784.a.b	ENSGT01100000266071	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35
Dog	MODERN SPECIES	34	BAZ1B (ENSCAFG00845003514)	FZD9 (ENSCAFG00845003552) #7	FKBP6 (ENSCAFG00845003574) #8	TRIM50 (ENSCAFG00845003598) #9	NSUN5 (ENSCAFG00845003615) #10	ENSCAFG00845003662 #11	HIP1 (ENSCAFG00845003838) #12	CCL26 (ENSCAFG00845004038) ##14	ENSCAFG00845004068 #14	RHBDD2 (ENSCAFG00845004123) #15	POR (ENSCAFG00845004195) #16	TMEM120A (ENSCAFG00845004305) #17	MDH2 (ENSCAFG00845004360) #19	SRRM3 (ENSCAFG00845004387) #20	ENSCAFG00845004409 #21	HSPB1 (ENSCAFG00845004436) #22	YWHAG (ENSCAFG00845004466) #23	SSC4D (ENSCAFG00845004484) #24	ZP3 (ENSCAFG00845004559) #25	DTX2 (ENSCAFG00845004598) #26	ENSCAFG00845004634	ENSCAFG00845004643 #27	UPK3BL2 (ENSCAFG00845004658) #28	RASA4B (ENSCAFG00845004698) #29	POLR2J (ENSCAFG00845004740) #30	LRWD1 (ENSCAFG00845004759) #31	ALKBH4 (ENSCAFG00845004778) #32	ORAI2 (ENSCAFG00845004789) #33	PRKRIP1 (ENSCAFG00845004804) #34	SH2B2 (ENSCAFG00845004821) #35	CUX1 (ENSCAFG00845004901) #36
Dingo	MODERN SPECIES	351	BAZ1B (ENSCAFG00020012488)	FZD9 (ENSCAFG00020012499) #7	FKBP6 (ENSCAFG00020012503) #8	TRIM50 (ENSCAFG00020012513) #9	NSUN5 (ENSCAFG00020012547) #10	ENSCAFG00020012553 #11	HIP1 (ENSCAFG00020012599) #12	CCL26 (ENSCAFG00020013010) ##14	CCL24 (ENSCAFG00020013018) #14	RHBDD2 (ENSCAFG00020013025) #15	ENSCAFG00020013028 #16	ENSCAFG00020013033 #18	ENSCAFG00020013040 #19	SRRM3 (ENSCAFG00020013073) #20	ENSCAFG00020013084 #21	HSPB1 (ENSCAFG00020013086) #22	ENSCAFG00020013088 #23	SSC4D (ENSCAFG00020013090) #24	ENSCAFG00020013096 #25	DTX2 (ENSCAFG00020013108) #26	ENSCAFG00020013119	ENSCAFG00020013121	UPK3B (ENSCAFG00020013126) #27	ENSCAFG00020013134 #28	ENSCAFG00020013141 #29	ENSCAFG00020013154	LRWD1 (ENSCAFG00020013162) #31	ALKBH4 (ENSCAFG00020013163) #32	ORAI2 (ENSCAFG00020013166) #33	PRKRIP1 (ENSCAFG00020013167) #34	SH2B2 (ENSCAFG00020013171) #35
Red fox	MODERN SPECIES	164	FZD9 (ENSVVUG00000024670) #7	FKBP6 (ENSVVUG00000024664) #8	TRIM50 (ENSVVUG00000024661) #9	NSUN5 (ENSVVUG00000024659) #10	ENSVVUG00000024635 #11	HIP1 (ENSVVUG00000023796) #12	CCL26 (ENSVVUG00000023780) ##14	CCL24 (ENSVVUG00000023779) #14	RHBDD2 (ENSVVUG00000023778) #15	POR (ENSVVUG00000023773) #16	TMEM120A (ENSVVUG00000023772) #17	STYXL1 (ENSVVUG00000023770) #18	MDH2 (ENSVVUG00000023769) #19	ENSVVUG00000023767	ENSVVUG00000023765 #21	HSPB1 (ENSVVUG00000023764) #22	YWHAG (ENSVVUG00000023763) #23	SSC4D (ENSVVUG00000023760) #24	ZP3 (ENSVVUG00000023755) #25	ENSVVUG00000023753	DTX2 (ENSVVUG00000023750) #26	UPK3B (ENSVVUG00000023748) #27	ENSVVUG00000023745 #28	ENSVVUG00000023736 #29	POLR2J (ENSVVUG00000023727)	LRWD1 (ENSVVUG00000023715) #31	ALKBH4 (ENSVVUG00000023707) #32	ORAI2 (ENSVVUG00000023703) #33	PRKRIP1 (ENSVVUG00000023702) #34	ENSVVUG00000023688	MYL10 (ENSVVUG00000023673) #37
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991.a #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Ursidae	ANCESTRAL SPECIES	3	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847.d #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00900000142991.a #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	1	BAZ1B (ENSAMEG00000011177)	FKBP6 (ENSAMEG00000011153) #8	TRIM50 (ENSAMEG00000011139) #9	NSUN5 (ENSAMEG00000011119) #10	ENSAMEG00000011093 #11	HIP1 (ENSAMEG00000010991) #12	CCL26 (ENSAMEG00000024924) ##14	CCL24 (ENSAMEG00000030777)	RHBDD2 (ENSAMEG00000028969) #15	POR (ENSAMEG00000010928) #16	TMEM120A (ENSAMEG00000010886) #17	STYXL1 (ENSAMEG00000010870) #18	MDH2 (ENSAMEG00000010846) #19	ENSAMEG00000027696 #20	ENSAMEG00000029505 #21	HSPB1 (ENSAMEG00000027219) #22	YWHAG (ENSAMEG00000024455) #23	SSC4D (ENSAMEG00000010834) #24	DTX2 (ENSAMEG00000015530) #26	ENSAMEG00000015529 #27	ENSAMEG00000015525 #28	ENSAMEG00000015484 #29	ENSAMEG00000015480 #30	LRWD1 (ENSAMEG00000015465) #31	ALKBH4 (ENSAMEG00000015460) #32	ORAI2 (ENSAMEG00000015450) #33	ENSAMEG00000015439 #34	SH2B2 (ENSAMEG00000015436) #35	CUX1 (ENSAMEG00000015392) #36	MYL10 (ENSAMEG00000015356) #37	COL26A1 (ENSAMEG00000001702)
Giant Panda	MODERN SPECIES	16	ENSAMEG00000027228	ENSAMEG00000010062	ENSAMEG00000020071	GPRIN2 (ENSAMEG00000020069)	ENSAMEG00000010054	ENSAMEG00000010047	ENSAMEG00000010021	ENSAMEG00000010018	ADIRF (ENSAMEG00000010016)	ENSAMEG00000010004	MMRN2 (ENSAMEG00000009997)	BMPR1A (ENSAMEG00000009972)	LDB3 (ENSAMEG00000009941)	OPN4 (ENSAMEG00000009912)	ENSAMEG00000027199 #21	ENSAMEG00000024384 #22	WAPL (ENSAMEG00000009905)	GRID1 (ENSAMEG00000009876)	CCSER2 (ENSAMEG00000009866)	RGR (ENSAMEG00000009851)	LRIT1 (ENSAMEG00000009838)	LRIT2 (ENSAMEG00000009834)	CDHR1 (ENSAMEG00000009794)	GPR15LG (ENSAMEG00000029953)	ENSAMEG00000029479	GHITM (ENSAMEG00000009753)	NRG3 (ENSAMEG00000002812)	ENSAMEG00000030329	ENSAMEG00000027737	SH2D4B (ENSAMEG00000012951)	TSPAN14 (ENSAMEG00000013070)
Ursus	ANCESTRAL SPECIES	121	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847.d #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00900000142991.a #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00940000159751 #36	ENSGT00940000161811 #37	ENSGT00390000013187.d
American black bear	MODERN SPECIES	272											ENSUAMG00000011347 #17	STYXL1 (ENSUAMG00000011342) #18	MDH2 (ENSUAMG00000011338) #19	ENSUAMG00000011337	ENSUAMG00000011334 #21	HSPB1 (ENSUAMG00000011333) #22	YWHAG (ENSUAMG00000011332) #23	SSC4D (ENSUAMG00000011331) #24	ENSUAMG00000011325 #25	DTX2 (ENSUAMG00000011322) #26	UPK3B (ENSUAMG00000011319) #27	ENSUAMG00000011317 #28	ENSUAMG00000011313 #29	ENSUAMG00000011310 #30	LRWD1 (ENSUAMG00000011306) #31	ALKBH4 (ENSUAMG00000011304) #32	ORAI2 (ENSUAMG00000011302) #33	PRKRIP1 (ENSUAMG00000011286) #34
Polar bear	MODERN SPECIES	213	MLXIPL (ENSUMAG00000013652)	TBL2 (ENSUMAG00000013647)	BCL7B (ENSUMAG00000013646)	BAZ1B (ENSUMAG00000013631)	FKBP6 (ENSUMAG00000013622) #8	TRIM50 (ENSUMAG00000013606) #9	NSUN5 (ENSUMAG00000013592) #10	HIP1 (ENSUMAG00000013022) #12	CCL26 (ENSUMAG00000012919) ##14	CCL24 (ENSUMAG00000012913) #14	RHBDD2 (ENSUMAG00000012907) #15	POR (ENSUMAG00000012718) #16	TMEM120A (ENSUMAG00000012676) #17	STYXL1 (ENSUMAG00000012669) #18	MDH2 (ENSUMAG00000012661) #19	ENSUMAG00000012652 #22	YWHAG (ENSUMAG00000012646) #23	ENSUMAG00000012628 #25	DTX2 (ENSUMAG00000012618) #26	UPK3B (ENSUMAG00000012615) #27	ENSUMAG00000012596 #29	ENSUMAG00000012594 #30	LRWD1 (ENSUMAG00000012584) #31	ALKBH4 (ENSUMAG00000012580) #32	ORAI2 (ENSUMAG00000012570) #33	PRKRIP1 (ENSUMAG00000012542) #34	CUX1 (ENSUMAG00000012256) #36	MYL10 (ENSUMAG00000012188) #37	IFT22 (ENSUMAG00000012174)	ENSUMAG00000012164	ZNHIT1 (ENSUMAG00000012160)
Mustelinae	ANCESTRAL SPECIES	41	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a.g #11	ENSGT00940000153594.d #12	ENSGT01100000263482.A.b ##14	ENSGT01100000263482.E #14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00900000142991.a #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Ferret	MODERN SPECIES	243	FKBP6 (ENSMPUG00000016067) #8	TRIM50 (ENSMPUG00000016044) #9	NSUN5 (ENSMPUG00000016038) #10	ENSMPUG00000016037 #11	HIP1 (ENSMPUG00000016036) #12	ENSMPUG00000016035	ENSMPUG00000016033 ##14	CCL24 (ENSMPUG00000016032) #14	RHBDD2 (ENSMPUG00000016030) #15	POR (ENSMPUG00000016029) #16	TMEM120A (ENSMPUG00000016011) #17	STYXL1 (ENSMPUG00000016004) #18	MDH2 (ENSMPUG00000016000) #19	ENSMPUG00000015998	ENSMPUG00000015996	HSPB1 (ENSMPUG00000015995) #22	YWHAG (ENSMPUG00000015993) #23	ENSMPUG00000015983	SSC4D (ENSMPUG00000015975) #24	ZP3 (ENSMPUG00000015972) #25	DTX2 (ENSMPUG00000015970) #26	ENSMPUG00000015968 #28	ENSMPUG00000015962 #29	LRWD1 (ENSMPUG00000015960) #31	ALKBH4 (ENSMPUG00000015958) #32	ORAI2 (ENSMPUG00000015956) #33	PRKRIP1 (ENSMPUG00000015941) #34	SH2B2 (ENSMPUG00000015935) #35	ENSMPUG00000015930	ENSMPUG00000015929	MYL10 (ENSMPUG00000015928) #37
American mink	DUPLICATION
American mink	MODERN SPECIES	102	BAZ1B (ENSNVIG00000004377)	FZD9 (ENSNVIG00000004373) #7	FKBP6 (ENSNVIG00000004341) #8	ENSNVIG00000004308	NSUN5 (ENSNVIG00000004273) #10	ENSNVIG00000004161 #11	HIP1 (ENSNVIG00000003986) #12	CCL26 (ENSNVIG00000003967) ##14	CCL24 (ENSNVIG00000003959) #14	RHBDD2 (ENSNVIG00000003937) #15	POR (ENSNVIG00000003900) #16	TMEM120A (ENSNVIG00000003691) #17	STYXL1 (ENSNVIG00000003640) #18	MDH2 (ENSNVIG00000003582) #19	ENSNVIG00000003559 #21	HSPB1 (ENSNVIG00000003553) #22	YWHAG (ENSNVIG00000003545) #23	SSC4D (ENSNVIG00000003523) #24	ENSNVIG00000003462 #25	DTX2 (ENSNVIG00000003355) #26	UPK3B (ENSNVIG00000003294) #27	UPK3L (ENSNVIG00000003277) #28	ENSNVIG00000003099 #29	ENSNVIG00000003060 #30	LRWD1 (ENSNVIG00000002908) #31	ALKBH4 (ENSNVIG00000002893) #32	ORAI2 (ENSNVIG00000002883) #33	PRKRIP1 (ENSNVIG00000002856) #34	SH2B2 (ENSNVIG00000002838) #35	CUX1 (ENSNVIG00000002028) #36	MYL10 (ENSNVIG00000001986) #37
American mink	MODERN SPECIES	332	ENSNVIG00000024476	ENSNVIG00000024480	ENSNVIG00000024506	ENSNVIG00000024528	GPRIN2 (ENSNVIG00000024530)	ENSNVIG00000024532	SHLD2 (ENSNVIG00000024540)	ENSNVIG00000024549	ENSNVIG00000024551	ADIRF (ENSNVIG00000024553)	SYUG (ENSNVIG00000024554)	MMRN2 (ENSNVIG00000024564)	BMPR1A (ENSNVIG00000024576)	LDB3 (ENSNVIG00000024586)	OPN4 (ENSNVIG00000024593)	ENSNVIG00000024595 #22	WAPL (ENSNVIG00000024598)
Atlantogenata	ANCESTRAL SPECIES	104										ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Xenarthra	ANCESTRAL SPECIES	198											ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000160149 #29	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35
Armadillo	MODERN SPECIES	490											POR (ENSDNOG00000005432) #16	TMEM120A (ENSDNOG00000032890) #17	STYXL1 (ENSDNOG00000014668) #18	MDH2 (ENSDNOG00000045607) #19	SRRM3 (ENSDNOG00000046922) #20	HSPB1 (ENSDNOG00000034615) #22	ENSDNOG00000039797 #23	SSC4D (ENSDNOG00000013157) #24	ENSDNOG00000017096 #25	DTX2 (ENSDNOG00000042172) #26	ENSDNOG00000017357 #27	ENSDNOG00000007321 #29	LRWD1 (ENSDNOG00000008305) #31	ALKBH4 (ENSDNOG00000024844) #32	ORAI2 (ENSDNOG00000046036) #33	PRKRIP1 (ENSDNOG00000048156) #34	SH2B2 (ENSDNOG00000042447) #35
Afrotheria	ANCESTRAL SPECIES	130										ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Afrotheria_a	ANCESTRAL SPECIES	133										ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Hyrax	MODERN SPECIES	5909															SRRM3 (ENSPCAG00000013700) #20	HSPB1 (ENSPCAG00000013816) #22
Tenrec	MODERN SPECIES	11143																HSPB1 (ENSETEG00000001189) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00900000142991 #21	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00940000156831	ENSGT00940000161226 #7	ENSGT00940000158514 #8	ENSGT00940000161467 #9	ENSGT00940000155974 #10	ENSGT00940000153253.b.a #11	ENSGT00940000153594.d #12	ENSGT01100000263482.E #14	ENSGT01100000263482.A.b ##14	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686.n #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT01030000234567.B.b #25	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000161811 #37
koala	MODERN SPECIES	109	BCL7B (ENSPCIG00000019181)	BAZ1B (ENSPCIG00000019188)	FZD9 (ENSPCIG00000019266) #7	FKBP6 (ENSPCIG00000023263) #8	TRIM50 (ENSPCIG00000023265) #9	NSUN5 (ENSPCIG00000023276) #10	ENSPCIG00000023279 #11	HIP1 (ENSPCIG00000023294) #12	ENSPCIG00000032135 #14	ENSPCIG00000024762 ##14	RHBDD2 (ENSPCIG00000024764) #15	POR (ENSPCIG00000018408) #16	ENSPCIG00000018404 #17	MDH2 (ENSPCIG00000018398) #19	ENSPCIG00000031434 #20	HSPB1 (ENSPCIG00000018389) #22	YWHAG (ENSPCIG00000034539) #23	SSC4D (ENSPCIG00000018385) #24	ENSPCIG00000018351 #25	DTX2 (ENSPCIG00000016797) #26	UPK3B (ENSPCIG00000016794) #27	ENSPCIG00000031366 #28	ENSPCIG00000009032 #29	ENSPCIG00000009026 #30	LRWD1 (ENSPCIG00000009023) #31	ALKBH4 (ENSPCIG00000009021) #32	ENSPCIG00000009020 #33	PRKRIP1 (ENSPCIG00000007359) #34	SH2B2 (ENSPCIG00000019770) #35	CUX1 (ENSPCIG00000003570) #36	MYL10 (ENSPCIG00000003597) #37
Common wonbat	MODERN SPECIES	1007	MLXIPL (ENSVURG00010003756)	TBL2 (ENSVURG00010003744)	BCL7B (ENSVURG00010003719)	BAZ1B (ENSVURG00010003681)	FZD9 (ENSVURG00010003653) #7	FKBP6 (ENSVURG00010003601) #8	TRIM50 (ENSVURG00010003572) #9	NSUN5 (ENSVURG00010003561) #10	ENSVURG00010003539 #11	HIP1 (ENSVURG00010003482) #12	ENSVURG00010003457 #14	RHBDD2 (ENSVURG00010003448) #15	POR (ENSVURG00010003418) #16	TMEM120A (ENSVURG00010003396) #17	STYXL1 (ENSVURG00010003380) #18	HSPB1 (ENSVURG00010003351) #22	YWHAG (ENSVURG00010003347) #23	SSC4D (ENSVURG00010003330) #24	ENSVURG00010003312 #25	DTX2 (ENSVURG00010003297) #26	UPK3B (ENSVURG00010003277) #27	ENSVURG00010003254 #28	ENSVURG00010003195 #29	ENSVURG00010003182 #30	LRWD1 (ENSVURG00010003158) #31	ALKBH4 (ENSVURG00010003147) #32	ORAI2 (ENSVURG00010003140) #33	PRKRIP1 (ENSVURG00010003128) #34	SH2B2 (ENSVURG00010003120) #35	CUX1 (ENSVURG00010003035) #36	MYL10 (ENSVURG00010002952) #37
Wallaby	MODERN SPECIES	8549															ENSMEUG00000013994 #20	HSPB1 (ENSMEUG00000014037) #22
Tasmanian devil	MODERN SPECIES	3	FZD9 (ENSSHAG00000026827) #7	FKBP6 (ENSSHAG00000015236) #8	TRIM50 (ENSSHAG00000015185) #9	NSUN5 (ENSSHAG00000015172) #10	ENSSHAG00000031039 #11	ENSSHAG00000014982 #12	ENSSHAG00000025686 #14	ENSSHAG00000025872 ##14	ENSSHAG00000029762 #15	ENSSHAG00000013704 #16	TMEM120A (ENSSHAG00000013686) #17	STYXL1 (ENSSHAG00000013456) #18	MDH2 (ENSSHAG00000013351) #19	ENSSHAG00000027407	ENSSHAG00000022379 #20	HSPB1 (ENSSHAG00000023413) #22	ENSSHAG00000028427 #21	SSC4D (ENSSHAG00000011892) #24	ENSSHAG00000011721 #25	DTX2 (ENSSHAG00000011249) #26	ENSSHAG00000011125 #27	ENSSHAG00000010986 #28	ENSSHAG00000021402 #29	ENSSHAG00000025613 #30	LRWD1 (ENSSHAG00000029883) #31	ALKBH4 (ENSSHAG00000022009) #32	ORAI2 (ENSSHAG00000010268) #33	SH2B2 (ENSSHAG00000027061) #35	CUX1 (ENSSHAG00000007801) #36	ENSSHAG00000029138 #37	ENSSHAG00000017360
Opossum	MODERN SPECIES	1	TBL2 (ENSMODG00000013775)	BCL7B (ENSMODG00000013765)	BAZ1B (ENSMODG00000013761)	FZD9 (ENSMODG00000013756) #7	FKBP6 (ENSMODG00000013754) #8	NSUN5 (ENSMODG00000013753) #10	ENSMODG00000013746 #11	HIP1 (ENSMODG00000013732) #12	ENSMODG00000039493 #14	ENSMODG00000043233 ##14	ENSMODG00000039919 #15	POR (ENSMODG00000013703) #16	ENSMODG00000035078 #18	MDH2 (ENSMODG00000013680) #19	SRRM3 (ENSMODG00000029593) #20	HSPB1 (ENSMODG00000013663) #22	ENSMODG00000051292 #21	YWHAG (ENSMODG00000013658) #23	SSC4D (ENSMODG00000013654) #24	ENSMODG00000013650 #25	ENSMODG00000013643 #26	UPK3B (ENSMODG00000013635) #27	ENSMODG00000013630 #28	ENSMODG00000013627 #29	ENSMODG00000013617 #30	LRWD1 (ENSMODG00000013612) #31	ALKBH4 (ENSMODG00000043599) #32	ORAI2 (ENSMODG00000013600) #33	PRKRIP1 (ENSMODG00000023127) #34	ENSMODG00000013593 #35	CUX1 (ENSMODG00000013581) #36
Platypus	MODERN SPECIES	8	PEX12 (ENSOANG00000042515)	AP2B1 (ENSOANG00000050274)	RASL10B (ENSOANG00000038310)	ENSOANG00000040830	ENSOANG00000045644	MMP28 (ENSOANG00000014274)	TAF15 (ENSOANG00000014273)	ENSOANG00000036567 #15	POR (ENSOANG00000043253) #16	ENSOANG00000042315 #17	STYXL1 (ENSOANG00000040559) #18	MDH2 (ENSOANG00000001378) #19	ENSOANG00000049511 #20	ENSOANG00000041397	ENSOANG00000045340 #21	HSPB1 (ENSOANG00000043454) #22	YWHAG (ENSOANG00000044061) #23	ENSOANG00000039969 #24	DTX2 (ENSOANG00000004296) #26	ENSOANG00000004297 #27	ENSOANG00000015341 #28	ENSOANG00000010016 #29	ENSOANG00000020912 #30	LRWD1 (ENSOANG00000042627) #31	ENSOANG00000050358 #32	ENSOANG00000048842	ORAI2 (ENSOANG00000049789) #33	PRKRIP1 (ENSOANG00000046088) #34	CUX1 (ENSOANG00000028870) #36	MYL10 (ENSOANG00000022693) #37	ENSOANG00000047006
Sauria	ANCESTRAL SPECIES	18	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00940000165977	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Archelosauria	ANCESTRAL SPECIES	18	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00940000165977	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Cryptodira	ANCESTRAL SPECIES	18	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Testudinoidea	ANCESTRAL SPECIES	15	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751.d #36	ENSGT00940000167381
Emydidae	ANCESTRAL SPECIES	16	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00940000164393	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751.d #36	ENSGT00940000167381
Three-toed box turtle	MODERN SPECIES	106	ENSTMTG00000021058	ENSTMTG00000021076	PEX12 (ENSTMTG00000021086)	AP2B1 (ENSTMTG00000021100)	RASL10B (ENSTMTG00000021120)	ENSTMTG00000021131	C17orf50 (ENSTMTG00000021173)	MMP28 (ENSTMTG00000021182)	TAF15 (ENSTMTG00000021209)	ENSTMTG00000021228	RHBDD2 (ENSTMTG00000021234) #15	POR (ENSTMTG00000021239) #16	TMEM120A (ENSTMTG00000021257) #17	STYXL1 (ENSTMTG00000021281) #18	MDH2 (ENSTMTG00000021330) #19	HSPB1 (ENSTMTG00000021338) #22	YWHAG (ENSTMTG00000021346) #23	SSC4D (ENSTMTG00000003093) #24	DTX2 (ENSTMTG00000003130) #26	UPK3B (ENSTMTG00000003172) #27	ENSTMTG00000003272 #28	ENSTMTG00000003356 #29	ENSTMTG00000003405	LRWD1 (ENSTMTG00000003422) #31	ALKBH4 (ENSTMTG00000003460) #32	ORAI2 (ENSTMTG00000003480) #33	PRKRIP1 (ENSTMTG00000003491) #34	SH2B2 (ENSTMTG00000003522) #35	ENSTMTG00000003577	ENSTMTG00000003637 #36	ENSTMTG00000003650
painted turtle	MODERN SPECIES	15	PEX12 (ENSCPBG00000027827)	AP2B1 (ENSCPBG00000027826)	RASL10B (ENSCPBG00000027825)	ENSCPBG00000027824	C17orf50 (ENSCPBG00000027822)	MMP28 (ENSCPBG00000027821)	TAF15 (ENSCPBG00000027820)	ENSCPBG00000027818	RHBDD2 (ENSCPBG00000027817) #15	POR (ENSCPBG00000027812) #16	TMEM120A (ENSCPBG00000027800) #17	STYXL1 (ENSCPBG00000027788) #18	MDH2 (ENSCPBG00000027786) #19	SRRM3 (ENSCPBG00000027784) #20	ENSCPBG00000027783 #21	HSPB1 (ENSCPBG00000027782) #22	YWHAG (ENSCPBG00000027781) #23	SSC4D (ENSCPBG00000027780) #24	DTX2 (ENSCPBG00000027779) #26	UPK3B (ENSCPBG00000027778) #27	ENSCPBG00000027777 #28	ENSCPBG00000027776	ENSCPBG00000027775 #29	ENSCPBG00000027774	ALKBH4 (ENSCPBG00000027772) #32	LRWD1 (ENSCPBG00000027771) #31	ORAI2 (ENSCPBG00000027770) #33	PRKRIP1 (ENSCPBG00000027768) #34	SH2B2 (ENSCPBG00000027767) #35	CUX1 (ENSCPBG00000027753) #36	ENSCPBG00000027750
Testudinidae	ANCESTRAL SPECIES	19	ENSGT00940000157654	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00390000007830	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00900000142991 #21	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751.d #36	ENSGT00940000163742	ENSGT00940000167381
Goode s thornscrub tortoise	MODERN SPECIES	8	RAD51D (ENSGEVG00005014593)	UNC45B (ENSGEVG00005014156)	ENSGEVG00005014013	PEX12 (ENSGEVG00005013971)	AP2B1 (ENSGEVG00005013893)	RASL10B (ENSGEVG00005013836)	ENSGEVG00005013773	C17orf50 (ENSGEVG00005013730)	MMP28 (ENSGEVG00005013548)	TAF15 (ENSGEVG00005013474)	RHBDD2 (ENSGEVG00005013445) #15	POR (ENSGEVG00005013399) #16	TMEM120A (ENSGEVG00005013274) #17	STYXL1 (ENSGEVG00005013243) #18	MDH2 (ENSGEVG00005013216) #19	HSPB1 (ENSGEVG00005013174) #22	YWHAG (ENSGEVG00005013157) #23	ENSGEVG00005013061 #24	DTX2 (ENSGEVG00005012918) #26	UPK3B (ENSGEVG00005012890) #27	ENSGEVG00005012795 #28	ENSGEVG00005011678 #29	ENSGEVG00005011546 #30	LRWD1 (ENSGEVG00005011499) #31	ALKBH4 (ENSGEVG00005011479) #32	ORAI2 (ENSGEVG00005011444) #33	PRKRIP1 (ENSGEVG00005011421) #34	SH2B2 (ENSGEVG00005011336) #35	CUX1 (ENSGEVG00005007920) #36	ENSGEVG00005007477	ENSGEVG00005007377
Abingdon island giant tortoise	MODERN SPECIES	586															ENSCABG00000001996 #21	HSPB1 (ENSCABG00000001994) #22	YWHAG (ENSCABG00000001991) #23	ENSCABG00000001988 #24	DTX2 (ENSCABG00000001982) #26	UPK3B (ENSCABG00000001935) #27	ENSCABG00000001899 #29	ENSCABG00000001888 #30	LRWD1 (ENSCABG00000001876) #31	ALKBH4 (ENSCABG00000001862) #32	ORAI2 (ENSCABG00000001859) #33	PRKRIP1 (ENSCABG00000001858) #34	SH2B2 (ENSCABG00000001856) #35	ENSCABG00000001850 #36	ENSCABG00000001719
Chinese turtle	MODERN SPECIES	630												TRIM29 (ENSPSIG00000006421)	NECTIN1 (ENSPSIG00000006950)	ENSPSIG00000001927	SRRM3 (ENSPSIG00000007850) #20	HSPB1 (ENSPSIG00000009825) #22	SSC4D (ENSPSIG00000010162) #24	DTX2 (ENSPSIG00000010834) #26	UPK3B (ENSPSIG00000007350) #27	ENSPSIG00000007647 #28	ENSPSIG00000007774 #29	ENSPSIG00000010173 #30	LRWD1 (ENSPSIG00000010437) #31	ENSPSIG00000001938 #32
Archosauria	ANCESTRAL SPECIES	18	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Australian saltwater crocodile	MODERN SPECIES	50	ENSCPRG00005005537	ENSCPRG00005005541	PEX12 (ENSCPRG00005005543)	AP2B1 (ENSCPRG00005005555)	RASL10B (ENSCPRG00005005573)	ENSCPRG00005005576	ENSCPRG00005005590	MMP28 (ENSCPRG00005005593)	TAF15 (ENSCPRG00005005599)	RHBDD2 (ENSCPRG00005005613) #15	POR (ENSCPRG00005005620) #16	TMEM120A (ENSCPRG00005005658) #17	ENSCPRG00005005857	MDH2 (ENSCPRG00005005862) #19	ENSCPRG00005005867	HSPB1 (ENSCPRG00005005874) #22	YWHAG (ENSCPRG00005005881) #23	SSC4D (ENSCPRG00005005887) #24	DTX2 (ENSCPRG00005005904) #26	UPK3B (ENSCPRG00005005925) #27	ENSCPRG00005005939 #29	LRWD1 (ENSCPRG00005005951) #31	ENSCPRG00005005968 #30	ALKBH4 (ENSCPRG00005005970) #32	ORAI2 (ENSCPRG00005005984) #33	PRKRIP1 (ENSCPRG00005005988) #34	SH2B2 (ENSCPRG00005005993) #35	CUX1 (ENSCPRG00005006027) #36	ENSCPRG00005006075	ENSCPRG00005006103	ENSCPRG00005006214
Aves	ANCESTRAL SPECIES	18	ENSGT00940000157654	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000170602
Neognathae	ANCESTRAL SPECIES	18	ENSGT00940000157654	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Galloanserae	ANCESTRAL SPECIES	17	ENSGT00940000157654	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Phasianidae	ANCESTRAL SPECIES	17	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT01070000257310	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742	ENSGT00940000167381
Japanese quail	MODERN SPECIES	10	RAD51D (ENSCJPG00005009921)	ENSCJPG00005009920	UNC45B (ENSCJPG00005009918)	PEX12 (ENSCJPG00005009914)	AP2B1 (ENSCJPG00005009912)	RASL10B (ENSCJPG00005009905)	ENSCJPG00005009902	MMP28 (ENSCJPG00005009900)	TAF15 (ENSCJPG00005009893)	ENSCJPG00005009827	POR (ENSCJPG00005009821) #16	TMEM120A (ENSCJPG00005009816) #17	ENSCJPG00005009815	MDH2 (ENSCJPG00005009814) #19	SRRM3 (ENSCJPG00005009813) #20	HSPB1 (ENSCJPG00005009812) #22	YWHAG (ENSCJPG00005009811) #23	SSC4D (ENSCJPG00005009805) #24	ENSCJPG00005009804	DTX2 (ENSCJPG00005009802) #26	UPK3B (ENSCJPG00005009801) #27	ENSCJPG00005009800 #28	ENSCJPG00005009799 #29	ENSCJPG00005009798 #30	LRWD1 (ENSCJPG00005009797) #31	ALKBH4 (ENSCJPG00005009796) #32	ORAI2 (ENSCJPG00005009795) #33	PRKRIP1 (ENSCJPG00005009793) #34	SH2B2 (ENSCJPG00005009791) #35	CUX1 (ENSCJPG00005009330) #36	ENSCJPG00005009326
Phasianidae_b	ANCESTRAL SPECIES	17	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT01070000257310	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000159751 #36	ENSGT00940000163742	ENSGT00940000167381
Turkey	MODERN SPECIES	13	ENSMGAG00000003469 #35	PRKRIP1 (ENSMGAG00000019957) #34	ENSMGAG00000003488 #32	ORAI2 (ENSMGAG00000017796) #33	ENSMGAG00000003534 #30	LRWD1 (ENSMGAG00000003500) #31	ENSMGAG00000003623 #26	ENSMGAG00000003617 #27	ENSMGAG00000003606 #28	ENSMGAG00000003538 #29	ENSMGAG00000020246 #30	ENSMGAG00000003653	ENSMGAG00000003662 #24	ENSMGAG00000003677 #23	ENSMGAG00000022940	ENSMGAG00000003680 #22	ENSMGAG00000003690 #20	ENSMGAG00000003753	MDH2 (ENSMGAG00000003716) #19	ENSMGAG00000003805 #16	ENSMGAG00000003770 #17	ENSMGAG00000003839	ENSMGAG00000021885	ENSMGAG00000003842	ENSMGAG00000004013	ENSMGAG00000004003	ENSMGAG00000003978	ENSMGAG00000004018	ENSMGAG00000004214	ENSMGAG00000019489	UNC45B (ENSMGAG00000004173)
Chicken	MODERN SPECIES	10	UNC45B (ENSGALG00010029628)	PEX12 (ENSGALG00010029627)	AP2B1 (ENSGALG00010029626)	RASL10B (ENSGALG00010029624)	ENSGALG00010029623	MMP28 (ENSGALG00010029622)	TAF15 (ENSGALG00010029621)	ENSGALG00010029620 #15	ENSGALG00010029619	POR (ENSGALG00010029617) #16	TMEM120A (ENSGALG00010029616) #17	ENSGALG00010029615	MDH2 (ENSGALG00010029614) #19	SRRM3 (ENSGALG00010029613) #20	ENSGALG00010029785	HSPB1 (ENSGALG00010029612) #22	YWHAG (ENSGALG00010029611) #23	SSC4D (ENSGALG00010029159) #24	ENSGALG00010029193	DTX2 (ENSGALG00010029192) #26	UPK3B (ENSGALG00010029157) #27	ENSGALG00010029156 #28	RASA4B (ENSGALG00010029932) #29	ENSGALG00010029311 #30	LRWD1 (ENSGALG00010029310) #31	ALKBH4 (ENSGALG00010029309) #32	ORAI3 (ENSGALG00010029304) #33	PRKRIP1 (ENSGALG00010029299) #34	SH2B2 (ENSGALG00010029297) #35	CUX1 (ENSGALG00010029285) #36	MYL10 (ENSGALG00010029271)
Anatidae	ANCESTRAL SPECIES	27	ENSGT00950000185966	ENSGT00940000157654	ENSGT00410000025651.A.a	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Pink-footed goose	MODERN SPECIES	38	ENSABRG00000003886	UNC45B (ENSABRG00000002564)	ENSABRG00000002424	PEX12 (ENSABRG00000002398)	AP2B1 (ENSABRG00000002319)	RASL10B (ENSABRG00000002299)	ENSABRG00000002276	MMP28 (ENSABRG00000002268)	TAF15 (ENSABRG00000002253)	RHBDD2 (ENSABRG00000002103) #15	POR (ENSABRG00000002005) #16	TMEM120A (ENSABRG00000001955) #17	ENSABRG00000001887	MDH2 (ENSABRG00000001842) #19	SRRM3 (ENSABRG00000001730) #20	HSPB1 (ENSABRG00000001700) #22	ENSABRG00000001693	YWHAG (ENSABRG00000001641) #23	SSC4D (ENSABRG00000001586) #24	DTX2 (ENSABRG00000001492) #26	UPK3B (ENSABRG00000001470) #27	ENSABRG00000001450 #28	ENSABRG00000001359 #29	ENSABRG00000001302 #30	LRWD1 (ENSABRG00000001249) #31	ALKBH4 (ENSABRG00000001235) #32	ORAI2 (ENSABRG00000001202) #33	PRKRIP1 (ENSABRG00000001187) #34	SH2B2 (ENSABRG00000001156) #35	ENSABRG00000001146	ENSABRG00000001096
Duck	MODERN SPECIES	4191																ENSAPLG00000018690 #22	ENSAPLG00000020014
Neognathae_b	ANCESTRAL SPECIES	20	ENSGT00950000185966	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Passeriformes	ANCESTRAL SPECIES	18	ENSGT00940000157654	ENSGT00950000185966	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Great tit	MODERN SPECIES	9	RFFL (ENSPMJG00000018994)	RAD51D (ENSPMJG00000018993)	UNC45B (ENSPMJG00000018992)	PEX12 (ENSPMJG00000018990)	AP2B1 (ENSPMJG00000018989)	RASL10B (ENSPMJG00000018988)	ENSPMJG00000018987	MMP28 (ENSPMJG00000018986)	TAF15 (ENSPMJG00000018985)	RHBDD2 (ENSPMJG00000018984) #15	POR (ENSPMJG00000018982) #16	TMEM120A (ENSPMJG00000018981) #17	ENSPMJG00000018980	MDH2 (ENSPMJG00000018979) #19	SRRM3 (ENSPMJG00000018978) #20	HSPB1 (ENSPMJG00000018977) #22	YWHAG (ENSPMJG00000018976) #23	SSC4D (ENSPMJG00000018975) #24	DTX2 (ENSPMJG00000018974) #26	UPK3B (ENSPMJG00000018973) #27	ENSPMJG00000018972 #28	ENSPMJG00000018971 #29	ENSPMJG00000018970 #30	LRWD1 (ENSPMJG00000018969) #31	ALKBH4 (ENSPMJG00000018968) #32	ORAI2 (ENSPMJG00000018967) #33	PRKRIP1 (ENSPMJG00000018966) #34	SH2B2 (ENSPMJG00000018965) #35	ENSPMJG00000018963	CUX1 (ENSPMJG00000018962) #36	ENSPMJG00000018958
Passeriformes_d	ANCESTRAL SPECIES	18	ENSGT00950000185966	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00940000165977	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Flycatcher	MODERN SPECIES	9	RFFL (ENSFALG00000009730)	RAD51D (ENSFALG00000009726)	UNC45B (ENSFALG00000009721)	PEX12 (ENSFALG00000009719)	AP2B1 (ENSFALG00000009715)	RASL10B (ENSFALG00000027159)	ENSFALG00000027238	MMP28 (ENSFALG00000009701)	ENSFALG00000009696	ENSFALG00000009693	POR (ENSFALG00000009688) #16	TMEM120A (ENSFALG00000009669) #17	MDH2 (ENSFALG00000009620) #19	SRRM3 (ENSFALG00000009603) #20	ENSFALG00000026877	HSPB1 (ENSFALG00000009587) #22	YWHAG (ENSFALG00000026928) #23	ENSFALG00000028705	ENSFALG00000009575	DTX2 (ENSFALG00000009561) #26	ENSFALG00000027894 #27	ENSFALG00000009540 #28	ENSFALG00000009533 #29	ENSFALG00000009523 #30	LRWD1 (ENSFALG00000009512) #31	ALKBH4 (ENSFALG00000028280) #32	ORAI2 (ENSFALG00000025629) #33	PRKRIP1 (ENSFALG00000026614) #34	SH2B2 (ENSFALG00000009471) #35	CUX1 (ENSFALG00000009409) #36	ENSFALG00000009380
Passeriformes_g	ANCESTRAL SPECIES	18	ENSGT00940000157654	ENSGT00950000185966	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00940000167381
Passeroidea	ANCESTRAL SPECIES	20	ENSGT00940000159095	ENSGT00940000157654	ENSGT00950000185966	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01030000235453	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36
Common canary	MODERN SPECIES	28	RFFL (ENSSCAG00000006590)	RAD51D (ENSSCAG00000006580)	UNC45B (ENSSCAG00000006357)	ENSSCAG00000006312	PEX12 (ENSSCAG00000006302)	AP2B1 (ENSSCAG00000006287)	RASL10B (ENSSCAG00000006283)	ENSSCAG00000006274	MMP28 (ENSSCAG00000006269)	TAF15 (ENSSCAG00000006263)	RHBDD2 (ENSSCAG00000006252) #15	POR (ENSSCAG00000006242) #16	TMEM120A (ENSSCAG00000006149) #17	ENSSCAG00000006123	MDH2 (ENSSCAG00000006093) #19	HSPB1 (ENSSCAG00000006083) #22	YWHAG (ENSSCAG00000006079) #23	ENSSCAG00000006074	ENSSCAG00000006072 #24	DTX2 (ENSSCAG00000006060) #26	ENSSCAG00000006046 #28	ENSSCAG00000006040 #29	ENSSCAG00000006039 #30	LRWD1 (ENSSCAG00000006035) #31	ALKBH4 (ENSSCAG00000006030) #32	ORAI2 (ENSSCAG00000006025) #33	PRKRIP1 (ENSSCAG00000006021) #34	SH2B2 (ENSSCAG00000006014) #35	ENSSCAG00000006009	CUX1 (ENSSCAG00000006001) #36	ENSSCAG00000005990
Zebra finch	MODERN SPECIES	10	RAD51D (ENSTGUG00000004887)	UNC45B (ENSTGUG00000004851)	ENSTGUG00000026935	PEX12 (ENSTGUG00000004847)	AP2B1 (ENSTGUG00000004771)	RASL10B (ENSTGUG00000023856)	ENSTGUG00000004758	MMP28 (ENSTGUG00000004745)	TAF15 (ENSTGUG00000004702)	ENSTGUG00000004693	POR (ENSTGUG00000004657) #16	TMEM120A (ENSTGUG00000004630) #17	ENSTGUG00000004616	MDH2 (ENSTGUG00000004571) #19	SRRM3 (ENSTGUG00000027467) #20	HSPB1 (ENSTGUG00000004559) #22	ENSTGUG00000021133	YWHAG (ENSTGUG00000004553) #23	SSC4D (ENSTGUG00000004547) #24	DTX2 (ENSTGUG00000004526) #26	UPK3B (ENSTGUG00000028345) #27	ENSTGUG00000022757 #28	ENSTGUG00000004513 #29	LRWD1 (ENSTGUG00000004484) #31	ALKBH4 (ENSTGUG00000004477) #32	ORAI2 (ENSTGUG00000021863) #33	ENSTGUG00000004439 #35	CUX1 (ENSTGUG00000004386) #36	ENSTGUG00000004371	ENSTGUG00000027771	COL26A1 (ENSTGUG00000004358)
Medium ground finch	MODERN SPECIES	90	UNC45B (ENSGFOG00000001128)	PEX12 (ENSGFOG00000000983)	AP2B1 (ENSGFOG00000000948)	RASL10B (ENSGFOG00000000933)	ENSGFOG00000000917	MMP28 (ENSGFOG00000000904)	ENSGFOG00000000894	TAF15 (ENSGFOG00000000872)	ENSGFOG00000000852	POR (ENSGFOG00000000818) #16	TMEM120A (ENSGFOG00000000663) #17	ENSGFOG00000000640	MDH2 (ENSGFOG00000000621) #19	SRRM3 (ENSGFOG00000000606) #20	ENSGFOG00000000595	HSPB1 (ENSGFOG00000000587) #22	YWHAG (ENSGFOG00000000583) #23	ENSGFOG00000000570	DTX2 (ENSGFOG00000000543) #26	ENSGFOG00000000529 #28	ENSGFOG00000000512 #29	ENSGFOG00000000503 #30	LRWD1 (ENSGFOG00000000491) #31	ALKBH4 (ENSGFOG00000000485) #32	ORAI2 (ENSGFOG00000000479) #33	PRKRIP1 (ENSGFOG00000000469) #34	SH2B2 (ENSGFOG00000000451) #35	ENSGFOG00000000438	CUX1 (ENSGFOG00000000418) #36	ENSGFOG00000000405	ENSGFOG00000013915
Neognathae_c	ANCESTRAL SPECIES	22	ENSGT00950000185966	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00950000183145.D	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000160149 #29	ENSGT00550000074975 #30	ENSGT00940000154248.b #31	ENSGT00390000006344 #32	ENSGT00390000015354.c.b.b #33	ENSGT00390000005003 #34	ENSGT00950000183191.a.b #35	ENSGT00940000163742	ENSGT00940000159751 #36	ENSGT00390000013187
Golden eagle	MODERN SPECIES	1	UNC45B (ENSACCG00020004519)	PEX12 (ENSACCG00020004505)	AP2B1 (ENSACCG00020004479)	RASL10B (ENSACCG00020004455)	ENSACCG00020004447	MMP28 (ENSACCG00020004423)	TAF15 (ENSACCG00020004390)	RHBDD2 (ENSACCG00020004381) #15	ENSACCG00020004375	POR (ENSACCG00020004354) #16	TMEM120A (ENSACCG00020004328) #17	ENSACCG00020004308	MDH2 (ENSACCG00020004291) #19	ENSACCG00020004279	ENSACCG00020004262	HSPB1 (ENSACCG00020004255) #22	ENSACCG00020004250	YWHAG (ENSACCG00020004244) #23	ENSACCG00020004237	DTX2 (ENSACCG00020004215) #26	UPK3B (ENSACCG00020004189) #27	ENSACCG00020004162 #28	ENSACCG00020004143 #29	ENSACCG00020004132 #30	LRWD1 (ENSACCG00020004124) #31	ALKBH4 (ENSACCG00020004109) #32	ORAI2 (ENSACCG00020004101) #33	PRKRIP1 (ENSACCG00020004090) #34	SH2B2 (ENSACCG00020004080) #35	ENSACCG00020004067 #36	ENSACCG00020004054
Kakapo	MODERN SPECIES	58	ENSSHBG00005006311	UNC45B (ENSSHBG00005006213)	PEX12 (ENSSHBG00005006156)	AP2B1 (ENSSHBG00005006021)	RASL10B (ENSSHBG00005006000)	ENSSHBG00005005958	MMP28 (ENSSHBG00005005940)	TAF15 (ENSSHBG00005005797)	RHBDD2 (ENSSHBG00005005771) #15	POR (ENSSHBG00005005716) #16	TMEM120A (ENSSHBG00005000765) #17	ENSSHBG00005000755	MDH2 (ENSSHBG00005000746) #19	SRRM3 (ENSSHBG00005013038) #20	ENSSHBG00005013030	HSPB1 (ENSSHBG00005013023) #22	YWHAG (ENSSHBG00005013017) #23	ENSSHBG00005012997	ENSSHBG00005012984	DTX2 (ENSSHBG00005012960) #26	UPK3B (ENSSHBG00005012933) #27	ENSSHBG00005012906 #29	ENSSHBG00005012895 #30	LRWD1 (ENSSHBG00005012877) #31	ALKBH4 (ENSSHBG00005012852) #32	ORAI2 (ENSSHBG00005012839) #33	PRKRIP1 (ENSSHBG00005012822) #34	SH2B2 (ENSSHBG00005012803) #35	ENSSHBG00005012775	CUX1 (ENSSHBG00005012729) #36	ENSSHBG00005012710
Lepidosauria	ANCESTRAL SPECIES	103	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28
tuatara	MODERN SPECIES	1203		UNC45B (ENSSPUG00000005839)	ENSSPUG00000005879	PEX12 (ENSSPUG00000005914)	AP2B1 (ENSSPUG00000005938)	ENSSPUG00000005963	RASL10B (ENSSPUG00000005974)	MMP28 (ENSSPUG00000006018)	TAF15 (ENSSPUG00000006042)	RHBDD2 (ENSSPUG00000006085) #15	POR (ENSSPUG00000006093) #16	TMEM120A (ENSSPUG00000006102) #17	STYXL1 (ENSSPUG00000006150) #18	MDH2 (ENSSPUG00000006263) #19	SRRM3 (ENSSPUG00000006285) #20	HSPB1 (ENSSPUG00000006322) #22	YWHAG (ENSSPUG00000006341) #23	SSC4D (ENSSPUG00000006350) #24	DTX2 (ENSSPUG00000006368) #26	UPK3B (ENSSPUG00000006384) #27	EIF4H (ENSSPUG00000006402)	MYBBP1A (ENSSPUG00000006417)	SPNS2 (ENSSPUG00000006466)	SPNS3 (ENSSPUG00000006553)	UBE2G1 (ENSSPUG00000006609)	ANKFY1 (ENSSPUG00000006623)	CYB5D2 (ENSSPUG00000006646)	ZZEF1 (ENSSPUG00000006713)	ATP2A3 (ENSSPUG00000006983)	P2RX1 (ENSSPUG00000007002)	CAMKK1 (ENSSPUG00000007039)
Episquamata	ANCESTRAL SPECIES	13	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000156265.x.b.a.a.a.b	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063
Toxicofera	ANCESTRAL SPECIES	23	ENSGT00940000159095	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521.l #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063
Elapidae	ANCESTRAL SPECIES	20	ENSGT00940000159095	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521.l #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747.e	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063
Elapidae_a	ANCESTRAL SPECIES	20	ENSGT00940000159095	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521.l #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747.e	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063
Acanthophiinae	ANCESTRAL SPECIES	11	ENSGT00940000159095	ENSGT00940000157654	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00960000189835	ENSGT00940000159596	ENSGT00940000156438	ENSGT00960000191068	ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521.l #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747.e	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063
Mainland tiger snake	MODERN SPECIES	44	ENSNSUG00000009327	UNC45B (ENSNSUG00000009326)	PEX12 (ENSNSUG00000009324)	AP2B1 (ENSNSUG00000009247)	RASL10B (ENSNSUG00000009246)	ENSNSUG00000009245	ENSNSUG00000009244	MMP28 (ENSNSUG00000009243)	TAF15 (ENSNSUG00000009242)	ENSNSUG00000009241	RHBDD2 (ENSNSUG00000009240) #15	POR (ENSNSUG00000009239) #16	TMEM120A (ENSNSUG00000009238) #17	ENSNSUG00000009228	MDH2 (ENSNSUG00000009227) #19	HSPB1 (ENSNSUG00000009226) #22	YWHAG (ENSNSUG00000009225) #23	ENSNSUG00000009224 #24	DTX2 (ENSNSUG00000009223) #26	UPK3B (ENSNSUG00000009220) #27	ENSNSUG00000009219 #28	ZZEF1 (ENSNSUG00000008846)	ATP2A3 (ENSNSUG00000008845)	P2RX1 (ENSNSUG00000008793)	CAMKK1 (ENSNSUG00000008792)	C1QBP (ENSNSUG00000008791)	ENSNSUG00000008790	ENSNSUG00000008789	DERL2 (ENSNSUG00000008788)	MIS12 (ENSNSUG00000008787)	RPAIN (ENSNSUG00000008786)
Eastern brown snake	MODERN SPECIES	40	RFFL (ENSPTXG00000004744)	RAD51D (ENSPTXG00000004743)	UNC45B (ENSPTXG00000003841)	PEX12 (ENSPTXG00000003827)	AP2B1 (ENSPTXG00000003826)	RASL10B (ENSPTXG00000003825)	ENSPTXG00000003824	MMP28 (ENSPTXG00000003814)	TAF15 (ENSPTXG00000003811)	ENSPTXG00000003809	RHBDD2 (ENSPTXG00000003806) #15	POR (ENSPTXG00000003804) #16	TMEM120A (ENSPTXG00000003800) #17	ENSPTXG00000003794	MDH2 (ENSPTXG00000003791) #19	HSPB1 (ENSPTXG00000003790) #22	YWHAG (ENSPTXG00000003789) #23	ENSPTXG00000003788 #24	DTX2 (ENSPTXG00000003786) #26	UPK3B (ENSPTXG00000003784) #27	ZZEF1 (ENSPTXG00000003783)	ATP2A3 (ENSPTXG00000003778)	P2RX1 (ENSPTXG00000003718)	CAMKK1 (ENSPTXG00000003717)	C1QBP (ENSPTXG00000003716)	DHX33 (ENSPTXG00000003715)	DERL2 (ENSPTXG00000003714)	MIS12 (ENSPTXG00000003713)	RPAIN (ENSPTXG00000003712)	ENSPTXG00000003711	NUP88 (ENSPTXG00000003709)
Blue-lipped sea krait	MODERN SPECIES	9939																HSPB1 (ENSLLTG00000013764) #22
Indian cobra	MODERN SPECIES		LIG3 (ENSNNAG00000014171)	RAD51D (ENSNNAG00000014103)	UNC45B (ENSNNAG00000014048)	PEX12 (ENSNNAG00000014026)	AP2B1 (ENSNNAG00000013966)	RASL10B (ENSNNAG00000013950)	ENSNNAG00000013864	ENSNNAG00000013856	TAF15 (ENSNNAG00000013821)	ENSNNAG00000013812	ENSNNAG00000013799	POR (ENSNNAG00000013759) #16	TMEM120A (ENSNNAG00000013725) #17	ENSNNAG00000013666	MDH2 (ENSNNAG00000013654) #19	HSPB1 (ENSNNAG00000013601) #22	YWHAG (ENSNNAG00000013591) #23	ENSNNAG00000013575 #24	ENSNNAG00000013557	ENSNNAG00000013536 #24	DTX2 (ENSNNAG00000013501) #26	ENSNNAG00000013484 #28	ZZEF1 (ENSNNAG00000011285)	ATP2A3 (ENSNNAG00000009196)	P2RX1 (ENSNNAG00000009018)	CAMKK1 (ENSNNAG00000008900)	C1QBP (ENSNNAG00000008867)	DHX33 (ENSNNAG00000008768)	DERL2 (ENSNNAG00000008736)	MIS12 (ENSNNAG00000008724)	RPAIN (ENSNNAG00000008684)
Laterata	ANCESTRAL SPECIES	18								ENSGT00390000000699 #15	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00390000010113 #18	ENSGT00390000016686 #19	ENSGT00940000156265.x.b.a.a.a.b	ENSGT00940000162625 #20	ENSGT01030000235453	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.b #27	ENSGT00940000153392.b.b.a #28	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000006416	ENSGT00390000015063	ENSGT00530000063743.b
Argentine black and white tegu	MODERN SPECIES	203										TMEM120A (ENSSMRG00000003359) #17	ENSSMRG00000003350	MDH2 (ENSSMRG00000003346) #19	ENSSMRG00000003341	SRRM3 (ENSSMRG00000003300) #20	ENSSMRG00000003289	HSPB1 (ENSSMRG00000003288) #22	ENSSMRG00000003287 #23	SSC4D (ENSSMRG00000003277) #24	DTX2 (ENSSMRG00000003270) #26	UPK3B (ENSSMRG00000003267) #27	ENSSMRG00000003264 #28	ENSSMRG00000003262	TAF15 (ENSSMRG00000003254)
Common wall lizard	MODERN SPECIES	6	UNC45B (ENSPMRG00000019047)	ENSPMRG00000019029	MMP28 (ENSPMRG00000018993)	ENSPMRG00000018970	RASL10B (ENSPMRG00000018960)	AP2B1 (ENSPMRG00000018527)	PEX12 (ENSPMRG00000018371)	RHBDD2 (ENSPMRG00000018356) #15	POR (ENSPMRG00000017929) #16	TMEM120A (ENSPMRG00000017797) #17	STYXL1 (ENSPMRG00000017774) #18	MDH2 (ENSPMRG00000017750) #19	ENSPMRG00000017737	ENSPMRG00000017732	ENSPMRG00000017723	HSPB1 (ENSPMRG00000017688) #22	ENSPMRG00000017686	YWHAG (ENSPMRG00000017676) #23	ENSPMRG00000017670	ENSPMRG00000017665	DTX2 (ENSPMRG00000017658) #26	UPK3B (ENSPMRG00000017647) #27	ENSPMRG00000017629 #28	ENSPMRG00000017620	ATP2A3 (ENSPMRG00000017017)	P2RX1 (ENSPMRG00000016916)	CAMKK1 (ENSPMRG00000016892)	C1QBP (ENSPMRG00000016881)	DHX33 (ENSPMRG00000016862)	DERL2 (ENSPMRG00000016840)	MIS12 (ENSPMRG00000016833)
Anura	ANCESTRAL SPECIES	78	ENSGT00950000185966	ENSGT00410000025651.A	ENSGT00390000016209	ENSGT00940000155206	ENSGT00940000160764	ENSGT00940000154849.a	ENSGT00940000159596	ENSGT00940000156438	ENSGT00940000165977	ENSGT00940000156847 #16	ENSGT00390000007848.a #17	ENSGT00940000164883	ENSGT00390000016686 #19	ENSGT00390000001189.b	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00940000160521 #24	ENSGT00940000157641 #26	ENSGT00940000153392.b.b.d.a #28	ENSGT00940000160149 #29	ENSGT00390000007662	ENSGT00940000164393	ENSGT00940000155463	ENSGT00940000154748.C	ENSGT00940000153392.b.b.d.b.a #28	ENSGT00940000158080	ENSGT00950000182963.b.a	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000159407
Leishan spiny toad	MODERN SPECIES	5	RASL10B (ENSLLEG00000017561)	ENSLLEG00000017614	MMP28 (ENSLLEG00000017649)	ENSLLEG00000017731	ENSLLEG00000017939	ENSLLEG00000018044	POR (ENSLLEG00000018178) #16	TMEM120A (ENSLLEG00000018475) #17	ENSLLEG00000018599	MDH2 (ENSLLEG00000018761) #19	ENSLLEG00000019151	ENSLLEG00000019299	ENSLLEG00000019381	ENSLLEG00000019433	SRRM3 (ENSLLEG00000019981) #20	HSPB1 (ENSLLEG00000020346) #22	YWHAG (ENSLLEG00000020399) #23	ENSLLEG00000020449	ENSLLEG00000020483	DTX2 (ENSLLEG00000020712) #26	ENSLLEG00000020969 #28	ENSLLEG00000021037 #28	ENSLLEG00000021092	ENSLLEG00000021145 #29	ENSLLEG00000021976	SYAP1 (ENSLLEG00000022016)	ENSLLEG00000022400	TXLNG (ENSLLEG00000022539)	RBBP7 (ENSLLEG00000022690)	ENSLLEG00000023636 #28	ENSLLEG00000023712 #28
Frog	MODERN SPECIES	2	unc45b (ENSXETG00000013482)	pex12 (ENSXETG00000013481)	ap2b1 (ENSXETG00000013480)	rasl10b (ENSXETG00000040968)	gas2l2 (ENSXETG00000037269)	mmp28 (ENSXETG00000013462)	taf15 (ENSXETG00000013477)	rhbdd2 (ENSXETG00000003427)	por (ENSXETG00000008983) #16	tmem120a (ENSXETG00000008980) #17	styxl1 (ENSXETG00000008978)	mdh2 (ENSXETG00000008976) #19	acy3 (ENSXETG00000008975)	srrm3 (ENSXETG00000031838) #20	ENSXETG00000037033	hspb1 (ENSXETG00000008972) #22	ywhag (ENSXETG00000008971) #23	ssc4d (ENSXETG00000031843) #24	rad51d (ENSXETG00000008969)	uap1l1 (ENSXETG00000008968) #26	upk3b (ENSXETG00000036878) #28	rasa4 (ENSXETG00000030799) #29	syap1 (ENSXETG00000008966)	polr2j (ENSXETG00000001108)	ENSXETG00000041777	ENSXETG00000001109	rbbp7 (ENSXETG00000026983)	ENSXETG00000039975 #28	ENSXETG00000044842 #28	tubb4b (ENSXETG00000001110)	nhs (ENSXETG00000001112)
Coelacanth	MODERN SPECIES	342	mpx (ENSLACG00000017046)	ENSLACG00000016630	SUPT4H1 (ENSLACG00000016364)	RNF43 (ENSLACG00000016277)	HSF5 (ENSLACG00000015426)	hpda (ENSLACG00000015263)	MTMR4 (ENSLACG00000014570)	ENSLACG00000014293	ENSLACG00000013897	ABHD11 (ENSLACG00000013733)	ENSLACG00000012518	ENSLACG00000012251	ENSLACG00000012004	orai2 (ENSLACG00000011817) ##33	SRRM3 (ENSLACG00000008008) #20	HSPB1 (ENSLACG00000007283) #22	YWHAG (ENSLACG00000005482) #23	ENSLACG00000004521	ENSLACG00000001707	ENSLACG00000000202
Actinopterygii	ANCESTRAL SPECIES	100	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000154757	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00950000183145.D	ENSGT00950000183203.d.d	ENSGT00390000018559
Reedfish	MODERN SPECIES	16	ZZEF1 (ENSECRG00000020773)	ATP2A3 (ENSECRG00000018836)	p2rx1 (ENSECRG00000018633)	camkk1a (ENSECRG00000018554)	dhx33 (ENSECRG00000018515)	c1qbp (ENSECRG00000018496)	rpain (ENSECRG00000018481)	ENSECRG00000018445	ENSECRG00000018405	ENSECRG00000018382	ENSECRG00000018364	ENSECRG00000018330	ENSECRG00000018301	mpx (ENSECRG00000018252)	SRRM3 (ENSECRG00000018204) #20	hspb1 (ENSECRG00000018180) #22	ywhag1 (ENSECRG00000018164) #23	ENSECRG00000017611	ENSECRG00000017409	supt4h1 (ENSECRG00000017339)	ENSECRG00000017279	ENSECRG00000017205	hpda (ENSECRG00000017044)	MTMR4 (ENSECRG00000016928)	nupr1a (ENSECRG00000016890)	vkorc1l1 (ENSECRG00000016871)	GUSB (ENSECRG00000016834)	mpx (ENSECRG00000014456)	ca4a (ENSECRG00000014210)	znhit3 (ENSECRG00000014189)	MYO19 (ENSECRG00000014070)
Neopterygii	ANCESTRAL SPECIES	98	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668	ENSGT01020000230351.C	ENSGT00940000154890.a	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000154757	ENSGT00940000163443	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a #23	ENSGT00950000183145.D	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000158976	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000157641 #26	ENSGT00940000153392.b.b #28	ENSGT00940000160149 #29	ENSGT00940000160349	ENSGT00940000159414	ENSGT00940000159426
Spotted gar	MODERN SPECIES	661	ENSLOCG00000002570	ube2g1a (ENSLOCG00000002581)	ankfy1 (ENSLOCG00000002602)	cyb5d2 (ENSLOCG00000002621)	ZZEF1 (ENSLOCG00000002640)	ATP2A3 (ENSLOCG00000002683)	p2rx1 (ENSLOCG00000002716)	camkk1a (ENSLOCG00000002745)	dhx33 (ENSLOCG00000002764)	c1qbp (ENSLOCG00000002779)	rpain (ENSLOCG00000002804)	MLXIPL (ENSLOCG00000002824)	ENSLOCG00000002849	itln3 (ENSLOCG00000002870)	SRRM3 (ENSLOCG00000002879) #20	hspb1 (ENSLOCG00000002907) #22	ywhag1 (ENSLOCG00000002919) #23	ENSLOCG00000002933	TSPOAP1 (ENSLOCG00000002948)	supt4h1 (ENSLOCG00000002970)	HSF5 (ENSLOCG00000002988)	MTMR4 (ENSLOCG00000003001)	RNF43 (ENSLOCG00000003019)	hpda (ENSLOCG00000003037)	nupr1a (ENSLOCG00000017423)	vkorc1l1 (ENSLOCG00000003060)	GUSB (ENSLOCG00000003067)	ca4a (ENSLOCG00000003098)	ENSLOCG00000003126	znhit3 (ENSLOCG00000003139)	MYO19 (ENSLOCG00000003147)
Osteoglossocephalai	ANCESTRAL SPECIES	7	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	27	ENSGT00390000005976.a.a.a.q	ENSGT00940000155228.h	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a.a #22	ENSGT00940000154890.a.b	ENSGT00940000155882.a.a.b #22	ENSGT01090000260061.c.a.c.a.a.a #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044.s	ENSGT00940000167280	ENSGT00390000010822
Asian bonytongue	MODERN SPECIES	17	SPNS2 (ENSSFOG00015002477)	spns3 (ENSSFOG00015002415)	UBE2G1 (ENSSFOG00015002389)	ankfy1 (ENSSFOG00015002252)	cyb5d2 (ENSSFOG00015030114)	ZZEF1 (ENSSFOG00015002015)	ATP2A3 (ENSSFOG00015001908)	camkk1a (ENSSFOG00015001875)	p2rx1 (ENSSFOG00015001843)	dhx33 (ENSSFOG00015001783)	c1qbp (ENSSFOG00015025738)	rpain (ENSSFOG00015001717)	ENSSFOG00015001703	SRRM3 (ENSSFOG00015001696) #20	ENSSFOG00015001582	HSPB1 (ENSSFOG00015032567) #22	YWHAG (ENSSFOG00015005117) #23	ENSSFOG00015001530	ENSSFOG00015001262	supt4h1 (ENSSFOG00015030696)	ENSSFOG00015029855	ENSSFOG00015000547	hpda (ENSSFOG00015000487)	MTMR4 (ENSSFOG00015000323)	ca4a (ENSSFOG00015000184)	GUSB (ENSSFOG00015000080)	vkorc1l1 (ENSSFOG00015029965)	nupr1a (ENSSFOG00015000060)	znhit3 (ENSSFOG00015028576)	MYO19 (ENSSFOG00015000055)	pigw (ENSSFOG00015000054)
Osteoglossiformes	ANCESTRAL SPECIES	27	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a.a #22	ENSGT00940000154890.a.b	ENSGT00940000155882.a.a.b #22	ENSGT01090000260061.c.a.c.a.a.a #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044.s	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Asian bonytongue	MODERN SPECIES	1	ENSSFOG00015004792	ENSSFOG00015004848	ENSSFOG00015032218	ENSSFOG00015004825	ENSSFOG00015004865	ENSSFOG00015004882	or91a1 (ENSSFOG00015027266)	ppme1 (ENSSFOG00015004914)	C2CD3 (ENSSFOG00015004970)	ENSSFOG00015004983	ube2g1a (ENSSFOG00015004998)	camkk1b (ENSSFOG00015027840)	ENSSFOG00015005013	psmd8 (ENSSFOG00015005032)	camkk1b (ENSSFOG00015032894)	hspb1 (ENSSFOG00015005088) #22	YWHAG (ENSSFOG00015026170) #23	ENSSFOG00015031518	VKORC1L1 (ENSSFOG00015005169)	DHRS11 (ENSSFOG00015005216)	flot2b (ENSSFOG00015031232)	p2rx8 (ENSSFOG00015005289)	ENSSFOG00015005323	ENSSFOG00015030073	ENSSFOG00015026414	ENSSFOG00015026917	ENSSFOG00015026204	ENSSFOG00015033292	ENSSFOG00015028358	KLHL6 (ENSSFOG00015004254)	rab34a (ENSSFOG00015031200)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	387																HSPB1 (ENSPKIG00000013403) #22	YWHAG (ENSPKIG00000013387) #23	ENSPKIG00000013353	VKORC1L1 (ENSPKIG00000013330)	DHRS11 (ENSPKIG00000013307)	FLOT2 (ENSPKIG00000013264)	FAM222B (ENSPKIG00000013238)	p2rx8 (ENSPKIG00000013160)	ENSPKIG00000013080	ENSPKIG00000013055	DHX40 (ENSPKIG00000013016)	ENSPKIG00000012985 ##25	cltcb (ENSPKIG00000012721)	tubd1 (ENSPKIG00000012615)	ENSPKIG00000012596	zgc:112083 (ENSPKIG00000012562)
P. kingsleyae	MODERN SPECIES	28	ENSPKIG00000017928	UBE2G1 (ENSPKIG00000017909)	ankfy1 (ENSPKIG00000017845)	cyb5d2 (ENSPKIG00000017813)	ZZEF1 (ENSPKIG00000017736)	ENSPKIG00000017699	ATP2A3 (ENSPKIG00000017593)	ENSPKIG00000017538	camkk1a (ENSPKIG00000017515)	p2rx1 (ENSPKIG00000017459)	dhx33 (ENSPKIG00000017401)	c1qbp (ENSPKIG00000017376)	rpain (ENSPKIG00000017333)	MLXIPL (ENSPKIG00000017285)	SRRM3 (ENSPKIG00000017233) #20	hspb1 (ENSPKIG00000017205) #22	YWHAG (ENSPKIG00000017195) #23	ENSPKIG00000017182	ENSPKIG00000017060	supt4h1 (ENSPKIG00000017008)	ENSPKIG00000016994	ENSPKIG00000016985	RNF43 (ENSPKIG00000016965)	hpda (ENSPKIG00000016911)	MTMR4 (ENSPKIG00000016725)	ca4a (ENSPKIG00000016649)	GUSB (ENSPKIG00000016604)	vkorc1l1 (ENSPKIG00000016585)	nupr1a (ENSPKIG00000016570)	znhit3 (ENSPKIG00000016556)	MYO19 (ENSPKIG00000016488)
Clupeocephala	ANCESTRAL SPECIES	33	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Euteleosteomorpha	ANCESTRAL SPECIES	35	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Protacanthopterygii	ANCESTRAL SPECIES	105	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	312		ENSGT00940000154735.c.f	ENSGT00390000005976.a.a.a	ENSGT00940000155228.f	ENSGT00940000156179.c	ENSGT00940000160156	ENSGT00940000155668.j.c.a	ENSGT00940000154890.a.a.c	ENSGT01020000230351.C.e	ENSGT00940000156747.k	ENSGT00390000018406.b	ENSGT00390000006416	ENSGT00940000159210.k.b	ENSGT00940000159210.k.a	ENSGT00980000199127.a	ENSGT00940000155882.a.a.c #22	ENSGT01090000260061.c.a.c.a.a.b.a #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d.l.b	ENSGT00390000018559.h	ENSGT00510000048674	ENSGT00940000154006.b.f	ENSGT00530000063474.B.e.b	ENSGT00940000158976.h.a	ENSGT00940000155690.b.a.e	ENSGT00390000001752.q	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Huchen	MODERN SPECIES	10283															ENSHHUG00000010044	hspb1 (ENSHHUG00000010037) #22
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00940000154735.c.f	ENSGT00390000005976.a.a.a	ENSGT00940000155228.f	ENSGT00940000156179.c	ENSGT00940000160156	ENSGT00940000155668.j.c.a	ENSGT00940000154890.a.a.c	ENSGT01020000230351.C.e	ENSGT00940000156747.k	ENSGT00390000018406.b	ENSGT00390000006416	ENSGT00940000159210.k.a	ENSGT00940000162625.d #20	ENSGT00980000199127.a	ENSGT00940000167838	ENSGT00940000155882.a.a.c #22	ENSGT01090000260061.c.a.c.a.a.b.a #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d.l.b	ENSGT00390000018559.h	ENSGT00510000048674	ENSGT00940000154006.b.f	ENSGT00530000063474.B.e.b	ENSGT00940000158976.h.a	ENSGT00940000155690.b.a.e	ENSGT00390000001752.q	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Salmo	ANCESTRAL SPECIES	17	ENSGT00940000157342.c.b.c	ENSGT01100000263892.b.b	ENSGT00940000154735.c.f	ENSGT00390000005976.a.a.a	ENSGT00940000155228.f	ENSGT00940000156179.c	ENSGT00940000160156	ENSGT00940000155668.j.c.a	ENSGT00940000154890.a.a.c	ENSGT01020000230351.C.e	ENSGT00940000156747.k	ENSGT00390000018406.b	ENSGT00390000006416	ENSGT00940000159210.k.a	ENSGT00940000162625.d #20	ENSGT00940000155882.a.a.c #22	ENSGT00980000199127.a	ENSGT01090000260061.c.a.c.a.a.b.a #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d.l.b	ENSGT00390000018559.h	ENSGT00510000048674.j	ENSGT00940000154006.b.f	ENSGT00530000063474.B.e.b	ENSGT00940000158976.h.a	ENSGT00940000155690.b.a.e	ENSGT00390000001752.q	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
River trout	MODERN SPECIES	10	spns3 (ENSSTUG00000026658)	ube2g1a (ENSSTUG00000026618)	ankfy1 (ENSSTUG00000026462)	cyb5d2 (ENSSTUG00000026434)	ENSSTUG00000026426	ATP2A3 (ENSSTUG00000024544)	camkk1a (ENSSTUG00000024334)	ENSSTUG00000024297	p2rx1 (ENSSTUG00000024252)	dhx33 (ENSSTUG00000024151)	c1qbp (ENSSTUG00000024132)	rpain (ENSSTUG00000024111)	ENSSTUG00000023946	ENSSTUG00000023923	ENSSTUG00000023922	hspb1 (ENSSTUG00000023907) #22	YWHAG (ENSSTUG00000023899) #23	ENSSTUG00000023800	ENSSTUG00000023786	ENSSTUG00000023784	ENSSTUG00000023733	supt4h1 (ENSSTUG00000023710)	ENSSTUG00000023687	ENSSTUG00000023675	hpda (ENSSTUG00000022568)	MTMR4 (ENSSTUG00000022258)	ca4a (ENSSTUG00000022230)	GUSB (ENSSTUG00000021537)	vkorc1l1 (ENSSTUG00000021517)	nupr1a (ENSSTUG00000021511)	znhit3 (ENSSTUG00000021500)
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000014948	ROAA (ENSSSAG00000015001)	spns3 (ENSSSAG00000015207)	ube2g1a (ENSSSAG00000015419)	ankfy1 (ENSSSAG00000015511)	cyb5d2 (ENSSSAG00000015825)	atp2a3 (ENSSSAG00000020900)	camkk1a (ENSSSAG00000061029)	ENSSSAG00000095623	p2rx1 (ENSSSAG00000061104)	ENSSSAG00000061168	DHX33 (ENSSSAG00000061210)	c1qbp (ENSSSAG00000061401)	rpain (ENSSSAG00000061383)	SRRM3 (ENSSSAG00000090322) #20	hspb1 (ENSSSAG00000088803) #22	ENSSSAG00000061449	YWHAG (ENSSSAG00000093880) #23	ENSSSAG00000038823	ENSSSAG00000061595	ENSSSAG00000105652	supt4h1 (ENSSSAG00000063502)	ENSSSAG00000063520	ENSSSAG00000062256	hpda (ENSSSAG00000062406)	MTMR4 (ENSSSAG00000061898)	ca4a (ENSSSAG00000062204)	ENSSSAG00000063558	vkorc1l1 (ENSSSAG00000101858)	znhit3 (ENSSSAG00000064315)	myo19 (ENSSSAG00000064331)
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00940000159087.y.a	ENSGT00940000157342.c.b.c	ENSGT01100000263892.b.b	ENSGT00940000154735.c.f	ENSGT00390000005976.a.a.a	ENSGT00940000155228.f	ENSGT00940000156179.c	ENSGT00940000160156	ENSGT00940000155668.j.c.a	ENSGT00940000154890.a.a.c	ENSGT01020000230351.C.e	ENSGT00940000156747.k	ENSGT00390000018406.b	ENSGT00390000006416	ENSGT00940000167838	ENSGT00940000155882.a.a.c #22	ENSGT00980000199127.a	ENSGT01090000260061.c.a.c.a.a.b.a #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d.l.b	ENSGT00390000018559.h	ENSGT00510000048674	ENSGT00940000154006.b.f	ENSGT00530000063474.B.e.b	ENSGT00940000158976.h.a	ENSGT00940000155690.b.a.e	ENSGT00390000001752.q	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Rainbow trout	MODERN SPECIES	1	spns3 (ENSOMYG00000013651)	ube2g1a (ENSOMYG00000053230)	ankfy1 (ENSOMYG00000012793)	cyb5d2 (ENSOMYG00000012681)	ATP2A3 (ENSOMYG00000073064)	ENSOMYG00000012654	ENSOMYG00000055996	camkk1a (ENSOMYG00000057855)	p2rx1 (ENSOMYG00000060599)	ENSOMYG00000012586	rpain (ENSOMYG00000012555)	C1QBP (ENSOMYG00000012574)	SRRM3 (ENSOMYG00000071000) #20	ENSOMYG00000048882	ENSOMYG00000056928	hspb1 (ENSOMYG00000048428) #22	ENSOMYG00000068171	YWHAG (ENSOMYG00000012532) #23	ENSOMYG00000064853	ENSOMYG00000059200	ENSOMYG00000073703	ENSOMYG00000058389	ENSOMYG00000064225	ENSOMYG00000066677	supt4h1 (ENSOMYG00000012356)	ENSOMYG00000012338	ENSOMYG00000068894	ENSOMYG00000012405	hpda (ENSOMYG00000012394)	MTMR4 (ENSOMYG00000050775)	ENSOMYG00000058807
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00940000164327.a.a	ENSGT00940000159087.y.a	ENSGT00940000157342.c.b.c	ENSGT00940000154735.c.f	ENSGT00390000005976.a.a.a	ENSGT00940000155228.f	ENSGT00940000156179.c	ENSGT00940000160156	ENSGT00940000155668.j.c.a	ENSGT00940000154890.a.a.c	ENSGT01020000230351.C.e	ENSGT00940000156747.k	ENSGT00390000018406.b	ENSGT00390000006416	ENSGT00940000167838	ENSGT00940000155882.a.a.c #22	ENSGT00980000199127.a	ENSGT01090000260061.c.a.c.a.a.b.a #23	ENSGT00950000183145.D.h.b	ENSGT00390000018559.h	ENSGT00510000048674	ENSGT00940000154006.b.f	ENSGT00530000063474.B.e.b	ENSGT00940000158976.h.a	ENSGT00940000155690.b.a.e	ENSGT00390000001752.q	ENSGT00940000157044.o	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Coho salmon	MODERN SPECIES	20	nipal4 (ENSOKIG00005027289)	ENSOKIG00005027298	GRIA1 (ENSOKIG00005027322)	HNRNPAB (ENSOKIG00005027535)	spns3 (ENSOKIG00005027568)	ube2g1a (ENSOKIG00005027766)	ankfy1 (ENSOKIG00005027816)	cyb5d2 (ENSOKIG00005028140)	ATP2A3 (ENSOKIG00005028180)	camkk1a (ENSOKIG00005028794)	p2rx1 (ENSOKIG00005028810)	dhx33 (ENSOKIG00005028861)	c1qbp (ENSOKIG00005028920)	rpain (ENSOKIG00005028939)	ENSOKIG00005028954	hspb1 (ENSOKIG00005028984) #22	ENSOKIG00005029002	YWHAG (ENSOKIG00005029011) #23	ENSOKIG00005029035	ENSOKIG00005029084	ENSOKIG00005029099	ENSOKIG00005029108	supt4h1 (ENSOKIG00005029125)	ENSOKIG00005029168	ENSOKIG00005029203	hpda (ENSOKIG00005029330)	MTMR4 (ENSOKIG00005031326)	ca4a (ENSOKIG00005037012)	GUSB (ENSOKIG00005037088)	ENSOKIG00005037621	vkorc1l1 (ENSOKIG00005037628)
Chinook salmon	MODERN SPECIES	1036																hspb1 (ENSOTSG00005039995) #22	ENSOTSG00005039996
Salmoninae	ANCESTRAL SPECIES	277	ENSGT00940000159087.z	ENSGT00940000157342.c.b.d	ENSGT01100000263892	ENSGT00940000154735.c.e	ENSGT00940000155228.e	ENSGT00940000156179.d	ENSGT00940000155045	ENSGT00940000155668.j.c.b	ENSGT00940000154890.a.a.d	ENSGT01020000230351.C.f	ENSGT00940000156747.l	ENSGT00390000018406.a	ENSGT01010000224314	ENSGT00940000159210.l	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.d #22	ENSGT00980000199127.b	ENSGT01090000260061.c.a.c.a.a.b.b #23	ENSGT00950000183145.D.h.a
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000157342.c.b.d	ENSGT01100000263892.b.a	ENSGT00940000154735.c.e	ENSGT00940000155228.e	ENSGT00940000156179.d	ENSGT00990000212862	ENSGT00940000155045	ENSGT00940000155668.j.c.b	ENSGT00940000154890.a.a.d	ENSGT01020000230351.C.f	ENSGT00940000156747.l	ENSGT00390000018406.a	ENSGT01010000224314	ENSGT00940000159210.l	ENSGT00940000162625.c #20	ENSGT00940000155882.a.a.d #22	ENSGT00980000199127.b	ENSGT01090000260061.c.a.c.a.a.b.b #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d.l.a	ENSGT00390000018559.g	ENSGT00940000154006.b.e	ENSGT00940000158976.h.b	ENSGT00940000155690.b.a.f	ENSGT00390000001752.r	ENSGT00940000157044.p	ENSGT00390000009552.i	ENSGT00390000006633.a.r	ENSGT00940000161111.a
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000157342.c.b.d	ENSGT01100000263892.b.a	ENSGT00940000154735.c.e	ENSGT00940000155228.e	ENSGT00940000156179.d	ENSGT00990000212862	ENSGT00940000155045	ENSGT00940000155668.j.c.b	ENSGT00940000154890.a.a.d	ENSGT01020000230351.C.f	ENSGT00940000156747.l	ENSGT00390000018406.a	ENSGT01010000224314	ENSGT00940000159210.l	ENSGT00940000162625.c #20	ENSGT00940000155882.a.a.d #22	ENSGT00980000199127.b	ENSGT01090000260061.c.a.c.a.a.b.b #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d.l.a	ENSGT01060000250101	ENSGT00940000154006.b.e	ENSGT00940000158976.h.b	ENSGT00940000155690.b.a.f	ENSGT00390000001752.r	ENSGT00940000157044.p	ENSGT00390000009552.i	ENSGT00390000006633.a.r	ENSGT00940000161111.a	ENSGT00950000183073.a.a.b.f.a	ENSGT00390000003354.e
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000157342.c.b.d	ENSGT01100000263892.b.a	ENSGT00940000154735.c.e	ENSGT00940000155228.e	ENSGT00940000156179.d	ENSGT00990000212862	ENSGT00940000155045	ENSGT00940000155668.j.c.b	ENSGT00940000154890.a.a.d	ENSGT01020000230351.C.f	ENSGT00940000156747.l	ENSGT00390000018406.a	ENSGT01010000224314	ENSGT00940000159210.l	ENSGT00940000162625.c #20	ENSGT00940000155882.a.a.d #22	ENSGT00980000199127.b	ENSGT01090000260061.c.a.c.a.a.b.b #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d.l.a	ENSGT01060000250101	ENSGT00940000154006.b.e	ENSGT00940000158976.h.b	ENSGT00940000155690.b.a.f	ENSGT00390000001752.r	ENSGT00940000157044.p	ENSGT00390000009552.i	ENSGT00390000006633.a.r	ENSGT00940000161111.a	ENSGT00950000183073.a.a.b.f.a	ENSGT00390000003354.e
Coho salmon	MODERN SPECIES	26	ENSOKIG00005007317	hnrnpabb (ENSOKIG00005007327)	ube2g1a (ENSOKIG00005007347)	ankfy1 (ENSOKIG00005007385)	ENSOKIG00005007455	ZZEF1 (ENSOKIG00005007501)	ATP2A3 (ENSOKIG00005008618)	camkk1a (ENSOKIG00005008776)	ENSOKIG00005008821	p2rx1 (ENSOKIG00005008860)	DHX33 (ENSOKIG00005008981)	c1qbp (ENSOKIG00005009024)	ENSOKIG00005009043	ENSOKIG00005009083	SRRM3 (ENSOKIG00005009227) #20	hspb1 (ENSOKIG00005009254) #22	ENSOKIG00005009271	YWHAG (ENSOKIG00005009289) #23	ENSOKIG00005009303	ENSOKIG00005009330	ENSOKIG00005009393	RNF43 (ENSOKIG00005009430)	MTMR4 (ENSOKIG00005009483)	ca4a (ENSOKIG00005009773)	GUSB (ENSOKIG00005009847)	vkorc1l1 (ENSOKIG00005010236)	GGNBP2 (ENSOKIG00005010255)	SAP30L (ENSOKIG00005010288)	HAND1 (ENSOKIG00005010299)	COPS6 (ENSOKIG00005010315)	ENSOKIG00005010392
Chinook salmon	MODERN SPECIES	33	gria1b (ENSOTSG00005019814)	ENSOTSG00005019893	hnrnpabb (ENSOTSG00005019894)	ube2g1a (ENSOTSG00005019902)	ankfy1 (ENSOTSG00005019906)	ENSOTSG00005021742	ATP2A3 (ENSOTSG00005021980)	camkk1a (ENSOTSG00005022048)	p2rx1 (ENSOTSG00005022050)	dhx33 (ENSOTSG00005022058)	c1qbp (ENSOTSG00005022061)	ENSOTSG00005022064	ENSOTSG00005022066	ENSOTSG00005022074	SRRM3 (ENSOTSG00005022122) #20	hspb1 (ENSOTSG00005022126) #22	ENSOTSG00005022128	YWHAG (ENSOTSG00005022130) #23	ENSOTSG00005022131	ENSOTSG00005022132	ENSOTSG00005022136	RNF43 (ENSOTSG00005022137)	MTMR4 (ENSOTSG00005022167)	ca4a (ENSOTSG00005033283)	GUSB (ENSOTSG00005033286)	vkorc1l1 (ENSOTSG00005033689)	ggnbp2 (ENSOTSG00005033693)	SAP30L (ENSOTSG00005033695)	HAND1 (ENSOTSG00005033696)	COPS6 (ENSOTSG00005033701)	ENSOTSG00005033719
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000034299	ENSOMYG00000034496	ube2g1a (ENSOMYG00000034520)	ankfy1 (ENSOMYG00000034650)	ENSOMYG00000034806	ZZEF1 (ENSOMYG00000004390)	ATP2A3 (ENSOMYG00000006908)	camkk1a (ENSOMYG00000007760)	p2rx1 (ENSOMYG00000007959)	ENSOMYG00000008079	c1qbp (ENSOMYG00000008118)	ENSOMYG00000008146	ENSOMYG00000008345	SRRM3 (ENSOMYG00000008446) #20	ENSOMYG00000069715	hspb1 (ENSOMYG00000008479) #22	ENSOMYG00000008495	YWHAG (ENSOMYG00000008503) #23	ENSOMYG00000012450	ENSOMYG00000056126	ENSOMYG00000059436	ENSOMYG00000008554	ENSOMYG00000057251	ENSOMYG00000074898	ENSOMYG00000008666	ENSOMYG00000008674	ENSOMYG00000073587	ENSOMYG00000068552	ENSOMYG00000008948	ENSOMYG00000060697	ENSOMYG00000051523
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000159087.z	ENSGT00940000157342.c.b.d	ENSGT01100000263892.b.a	ENSGT00940000154735.c.e	ENSGT00940000155228.e	ENSGT00940000156179.d	ENSGT00990000212862	ENSGT00940000155045	ENSGT00940000155668.j.c.b	ENSGT00940000154890.a.a.d	ENSGT01020000230351.C.f	ENSGT00390000018406.a	ENSGT01010000224314	ENSGT00940000159210.l	ENSGT00940000162625.c #20	ENSGT00940000155882.a.a.d #22	ENSGT01090000260061.c.a.c.a.a.b.b #23	ENSGT00950000183145.D.h.a	ENSGT00950000183203.d.d.l.a	ENSGT00390000018559.g	ENSGT00510000048674.i	ENSGT00940000154006.b.e	ENSGT00940000158976.h.b	ENSGT00940000155690.b.a.f	ENSGT00390000001752.r	ENSGT00940000157044.p	ENSGT00390000009552.i	ENSGT00390000006633.a.r	ENSGT00940000161111.a
Atlantic salmon	MODERN SPECIES	4	ROAA (ENSSSAG00000043692)	ube2g1a (ENSSSAG00000043662)	ankfy1 (ENSSSAG00000042993)	ENSSSAG00000086033	ENSSSAG00000042927	ZZEF1 (ENSSSAG00000041149)	ATP2A3 (ENSSSAG00000040294)	camkk1a (ENSSSAG00000040052)	p2rx1 (ENSSSAG00000039817)	ENSSSAG00000115502	c1qbp (ENSSSAG00000039711)	ENSSSAG00000039636	ENSSSAG00000039257	ENSSSAG00000086270	srrm3 (ENSSSAG00000039179) #20	hspb1 (ENSSSAG00000101076) #22	143g1 (ENSSSAG00000038870) #23	ENSSSAG00000119650	ENSSSAG00000073527	supt4h1 (ENSSSAG00000073514)	ENSSSAG00000073513	ENSSSAG00000070458	ENSSSAG00000111810	ENSSSAG00000070051	ENSSSAG00000108195	ENSSSAG00000096234	ENSSSAG00000069957	sp30l (ENSSSAG00000069942)	ENSSSAG00000084076	ENSSSAG00000108420	ENSSSAG00000064552
River trout	MODERN SPECIES	6	gria1b (ENSSTUG00000002642)	ENSSTUG00000001837	hnrnpabb (ENSSTUG00000017846)	ube2g1a (ENSSTUG00000017825)	ankfy1 (ENSSTUG00000017652)	ENSSTUG00000017628	ZZEF1 (ENSSTUG00000017555)	ENSSTUG00000017545	ATP2A3 (ENSSTUG00000017361)	camkk1a (ENSSTUG00000017272)	p2rx1 (ENSSTUG00000017171)	c1qbp (ENSSTUG00000017143)	ENSSTUG00000017131	ENSSTUG00000016772	SRRM3 (ENSSTUG00000016738) #20	hspb1 (ENSSTUG00000016717) #22	YWHAG (ENSSTUG00000016703) #23	ENSSTUG00000016687	ENSSTUG00000016517	ENSSTUG00000016495	ENSSTUG00000016481	RNF43 (ENSSTUG00000016472)	MTMR4 (ENSSTUG00000013379)	ENSSTUG00000013258	vkorc1l1 (ENSSTUG00000013236)	GUSB (ENSSTUG00000012723)	ggnbp2 (ENSSTUG00000012629)	ENSSTUG00000012613	HAND1 (ENSSTUG00000012604)	ENSSTUG00000012586	ENSSTUG00000012569
Huchen	MODERN SPECIES	2413																hspb1 (ENSHHUG00000038322) #22	ENSHHUG00000038332	YWHAG (ENSHHUG00000038341) #23	ENSHHUG00000038375	ENSHHUG00000038376	ENSHHUG00000038382
Northern pike	MODERN SPECIES	6	cyb5d2 (ENSELUG00000020550)	ZZEF1 (ENSELUG00000000902)	ENSELUG00000033003	ENSELUG00000020396	ENSELUG00000026241	camkk1a (ENSELUG00000020319)	p2rx1 (ENSELUG00000020285)	ENSELUG00000029668	dhx33 (ENSELUG00000020257)	c1qbp (ENSELUG00000020217)	rpain (ENSELUG00000020160)	ENSELUG00000020086	ENSELUG00000030474	SRRM3 (ENSELUG00000030395) #20	ENSELUG00000020024	hspb1 (ENSELUG00000000880) #22	YWHAG (ENSELUG00000019980) #23	ENSELUG00000019966	ENSELUG00000034168	ENSELUG00000029372	ENSELUG00000019930	supt4h1 (ENSELUG00000019831)	ENSELUG00000019791	ENSELUG00000019748	ENSELUG00000019733	ENSELUG00000019770	hpda (ENSELUG00000019714)	MTMR4 (ENSELUG00000019662)	ca4a (ENSELUG00000000861)	GUSB (ENSELUG00000019564)	vkorc1l1 (ENSELUG00000019523)
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT01090000260061.c.a.c.a.b #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000169226	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00940000162108	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Zig-zag eel	MODERN SPECIES	5	ftr82 (ENSMAMG00000005363)	ftr83 (ENSMAMG00000005381)	ruvbl2 (ENSMAMG00000005433)	SPNS2 (ENSMAMG00000005474)	spns3 (ENSMAMG00000005520)	ube2g1a (ENSMAMG00000005550)	ankfy1 (ENSMAMG00000005565)	cyb5d2 (ENSMAMG00000005622)	ZZEF1 (ENSMAMG00000005641)	ATP2A3 (ENSMAMG00000005755)	camkk1a (ENSMAMG00000005838)	p2rx1 (ENSMAMG00000005914)	ENSMAMG00000005936	c1qbp (ENSMAMG00000005982)	ENSMAMG00000005994	hspb1 (ENSMAMG00000025168) #22	ENSMAMG00000006048 #23	ENSMAMG00000006053	ENSMAMG00000006074	ENSMAMG00000006087	supt4h1 (ENSMAMG00000024582)	ENSMAMG00000006168	ENSMAMG00000006268	hpda (ENSMAMG00000006282)	MTMR4 (ENSMAMG00000006315)	ca4a (ENSMAMG00000006393)	ENSMAMG00000006410	vkorc1l1 (ENSMAMG00000028611)	nupr1a (ENSMAMG00000006453)	znhit3 (ENSMAMG00000006489)	pigw (ENSMAMG00000006498)
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Siamese fighting fish	MODERN SPECIES	5	ruvbl2 (ENSBSLG00000023101)	SPNS2 (ENSBSLG00000022986)	spns3 (ENSBSLG00000022634)	ube2g1a (ENSBSLG00000022583)	ankfy1 (ENSBSLG00000022451)	cyb5d2 (ENSBSLG00000022432)	ZZEF1 (ENSBSLG00000021871)	ATP2A3 (ENSBSLG00000020850)	ENSBSLG00000020824	camkk1a (ENSBSLG00000020815)	p2rx1 (ENSBSLG00000020792)	dhx33 (ENSBSLG00000020779)	c1qbp (ENSBSLG00000020775)	ENSBSLG00000020773	ENSBSLG00000020772	hspb1 (ENSBSLG00000020771) #22	YWHAG (ENSBSLG00000020770) #23	ENSBSLG00000020766	ENSBSLG00000020761	ENSBSLG00000020756	supt4h1 (ENSBSLG00000020753)	ENSBSLG00000020749	hpda (ENSBSLG00000020674)	MTMR4 (ENSBSLG00000019757)	ca4a (ENSBSLG00000019727)	GUSB (ENSBSLG00000019670)	vkorc1l1 (ENSBSLG00000019664)	nupr1a (ENSBSLG00000019662)	znhit3 (ENSBSLG00000019660)	MYO19 (ENSBSLG00000019637)	pigw (ENSBSLG00000019631)
Climbing perch	MODERN SPECIES	5	ftr83 (ENSATEG00000004332)	ruvbl2 (ENSATEG00000004385)	SPNS2 (ENSATEG00000004450)	spns3 (ENSATEG00000004516)	ube2g1a (ENSATEG00000026882)	ankfy1 (ENSATEG00000004571)	cyb5d2 (ENSATEG00000004642)	ZZEF1 (ENSATEG00000004666)	ATP2A3 (ENSATEG00000004892)	camkk1a (ENSATEG00000004999)	p2rx1 (ENSATEG00000005010)	ENSATEG00000005019	c1qbp (ENSATEG00000028014)	ENSATEG00000005084	ENSATEG00000005175	hspb1 (ENSATEG00000005203) #22	ENSATEG00000005227 #23	ENSATEG00000029227	ENSATEG00000025491	ENSATEG00000005286	supt4h1 (ENSATEG00000005317)	ENSATEG00000026547	ENSATEG00000029511	ENSATEG00000005333	ENSATEG00000005342	hpda (ENSATEG00000005346)	MTMR4 (ENSATEG00000005406)	ca4a (ENSATEG00000005440)	ENSATEG00000005449	vkorc1l1 (ENSATEG00000027155)	nupr1a (ENSATEG00000005517)
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Pleuronectoidei	ANCESTRAL SPECIES	27	ENSGT00940000166102	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Turbot	MODERN SPECIES	16	ftr83 (ENSSMAG00000000773)	ruvbl2 (ENSSMAG00000027779)	ruvbl2 (ENSSMAG00000021893)	SPNS2 (ENSSMAG00000000663)	ube2g1a (ENSSMAG00000000657)	ankfy1 (ENSSMAG00000000642)	cyb5d2 (ENSSMAG00000000640)	ZZEF1 (ENSSMAG00000000586)	ATP2A3 (ENSSMAG00000000561)	camkk1a (ENSSMAG00000000541)	p2rx1 (ENSSMAG00000000512)	ENSSMAG00000000497	c1qbp (ENSSMAG00000000492)	ENSSMAG00000000485	ENSSMAG00000000472	hspb1 (ENSSMAG00000000460) #22	ENSSMAG00000022653 #23	ENSSMAG00000000452	ENSSMAG00000000445	ENSSMAG00000000427	supt4h1 (ENSSMAG00000037724)	ENSSMAG00000000413	ENSSMAG00000000408	hpda (ENSSMAG00000000394)	MTMR4 (ENSSMAG00000000372)	ca4a (ENSSMAG00000000365)	ENSSMAG00000000354	vkorc1l1 (ENSSMAG00000000351)	nupr1a (ENSSMAG00000000346)	znhit3 (ENSSMAG00000034762)	MYO19 (ENSSMAG00000000332)
Tongue sole	MODERN SPECIES	10	ftr82 (ENSCSEG00000011399)	ftr83 (ENSCSEG00000011391)	ruvbl2 (ENSCSEG00000011364)	SPNS2 (ENSCSEG00000011335)	ube2g1a (ENSCSEG00000011314)	ankfy1 (ENSCSEG00000011282)	cyb5d2 (ENSCSEG00000011274)	ZZEF1 (ENSCSEG00000011204)	ATP2A3 (ENSCSEG00000011132)	camkk1a (ENSCSEG00000011071)	p2rx1 (ENSCSEG00000011044)	dhx33 (ENSCSEG00000011017)	c1qbp (ENSCSEG00000011004)	ENSCSEG00000010991	SRRM3 (ENSCSEG00000010978) #20	hspb1 (ENSCSEG00000010973) #22	ENSCSEG00000010966	YWHAG (ENSCSEG00000010962) #23	ENSCSEG00000010953	ENSCSEG00000010919	supt4h1 (ENSCSEG00000010897)	ENSCSEG00000010890	ENSCSEG00000010885	ENSCSEG00000010880	hpda (ENSCSEG00000010853)	MTMR4 (ENSCSEG00000010749)	ca4a (ENSCSEG00000010729)	tmem132e (ENSCSEG00000010685)	dtx2 (ENSCSEG00000010666) #26	GTF2IRD1 (ENSCSEG00000010605)	CLIP2 (ENSCSEG00000010519)
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Greater amberjack	MODERN SPECIES	39	ftr83 (ENSSDUG00000018269)	ruvbl2 (ENSSDUG00000018240)	SPNS2 (ENSSDUG00000018219)	spns3 (ENSSDUG00000018188)	ube2g1a (ENSSDUG00000018171)	ankfy1 (ENSSDUG00000018127)	cyb5d2 (ENSSDUG00000018115)	ZZEF1 (ENSSDUG00000018005)	ATP2A3 (ENSSDUG00000017936)	camkk1a (ENSSDUG00000017888)	p2rx1 (ENSSDUG00000017825)	dhx33 (ENSSDUG00000017798)	c1qbp (ENSSDUG00000017784)	ENSSDUG00000017760	ENSSDUG00000017751	hspb1 (ENSSDUG00000017741) #22	YWHAG (ENSSDUG00000017737) #23	ENSSDUG00000017708	ENSSDUG00000017660	supt4h1 (ENSSDUG00000017639)	ENSSDUG00000017626	ENSSDUG00000017604	hpda (ENSSDUG00000017587)	MTMR4 (ENSSDUG00000017414)	ca4a (ENSSDUG00000017377)	GUSB (ENSSDUG00000017351)	vkorc1l1 (ENSSDUG00000017339)	nupr1a (ENSSDUG00000017320)	znhit3 (ENSSDUG00000017305)	ENSSDUG00000017289	pigw (ENSSDUG00000017286)
Yellowtail amberjack	MODERN SPECIES	2973	ftr83 (ENSSLDG00000020663)	ruvbl2 (ENSSLDG00000020629)	SPNS2 (ENSSLDG00000020609)	spns3 (ENSSLDG00000020590)	ube2g1a (ENSSLDG00000020570)	ankfy1 (ENSSLDG00000020515)	cyb5d2 (ENSSLDG00000020502)	ZZEF1 (ENSSLDG00000020380)	ATP2A3 (ENSSLDG00000020300)	camkk1a (ENSSLDG00000020225)	p2rx1 (ENSSLDG00000020167)	dhx33 (ENSSLDG00000020132)	c1qbp (ENSSLDG00000020121)	ENSSLDG00000020090	SRRM3 (ENSSLDG00000020070) #20	hspb1 (ENSSLDG00000020050) #22	YWHAG (ENSSLDG00000020040) #23	ENSSLDG00000020026	ENSSLDG00000019867	supt4h1 (ENSSLDG00000019831)	ENSSLDG00000019806	ENSSLDG00000019787	hpda (ENSSLDG00000019737)	MTMR4 (ENSSLDG00000019603)	ca4a (ENSSLDG00000019566)	GUSB (ENSSLDG00000019543)	vkorc1l1 (ENSSLDG00000019538)	nupr1a (ENSSLDG00000019522)	znhit3 (ENSSLDG00000019511)	MYO19 (ENSSLDG00000019480)	pigw (ENSSLDG00000019468)
Barramundi perch	MODERN SPECIES	94	ruvbl2 (ENSLCAG00010016656)	SPNS2 (ENSLCAG00010016747)	spns3 (ENSLCAG00010016762)	ube2g1a (ENSLCAG00010016770)	ankfy1 (ENSLCAG00010016804)	cyb5d2 (ENSLCAG00010016953)	ZZEF1 (ENSLCAG00010016985)	ATP2A3 (ENSLCAG00010017276)	camkk1a (ENSLCAG00010017749)	p2rx1 (ENSLCAG00010017760)	dhx33 (ENSLCAG00010017766)	c1qbp (ENSLCAG00010017771)	ENSLCAG00010017776	SRRM3 (ENSLCAG00010017786) #20	ENSLCAG00010017789	hspb1 (ENSLCAG00010017792) #22	YWHAG (ENSLCAG00010017799) #23	ENSLCAG00010017815	ENSLCAG00010017820	TSPOAP1 (ENSLCAG00010017830)	supt4h1 (ENSLCAG00010017846)	ENSLCAG00010017853	ENSLCAG00010017857	hpda (ENSLCAG00010017863)	MTMR4 (ENSLCAG00010017953)	ca4a (ENSLCAG00010018657)	GUSB (ENSLCAG00010018683)	vkorc1l1 (ENSLCAG00010018772)	nupr1a (ENSLCAG00010018776)	znhit3 (ENSLCAG00010018778)	MYO19 (ENSLCAG00010018805)
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Tetraodontidae	ANCESTRAL SPECIES	28	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00940000163549.i.a	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Tetraodon	MODERN SPECIES	22	ENSTNIG00000019771	ENSTNIG00000008536	ncor1 (ENSTNIG00000008537)	zswim7 (ENSTNIG00000008538)	adora2b (ENSTNIG00000008539)	SPECC1 (ENSTNIG00000008540)	cyb5d2 (ENSTNIG00000008541)	ZZEF1 (ENSTNIG00000008542)	ATP2A3 (ENSTNIG00000008543)	camkk1a (ENSTNIG00000008544)	p2rx1 (ENSTNIG00000008545)	dhx33 (ENSTNIG00000008546)	c1qbp (ENSTNIG00000008547)	ENSTNIG00000008548	SRRM3 (ENSTNIG00000008549) #20	hspb1 (ENSTNIG00000008550) #22	YWHAG (ENSTNIG00000000725) #23	ENSTNIG00000008551	ENSTNIG00000008552	supt4h1 (ENSTNIG00000008553)	ENSTNIG00000008554	ENSTNIG00000008555	hpda (ENSTNIG00000008556)	MTMR4 (ENSTNIG00000008557)	ca4a (ENSTNIG00000008558)	GUSB (ENSTNIG00000008559)	vkorc1l1 (ENSTNIG00000008560)	znhit3 (ENSTNIG00000008561)	MYO19 (ENSTNIG00000008562)	pigw (ENSTNIG00000008563)	dhrs11a (ENSTNIG00000008564)
Fugu	MODERN SPECIES	6	ncor1 (ENSTRUG00000000700)	zswim7 (ENSTRUG00000001143)	adora2b (ENSTRUG00000022664)	SPECC1 (ENSTRUG00000001159)	cyb5d2 (ENSTRUG00000001423)	ZZEF1 (ENSTRUG00000001469)	ATP2A3 (ENSTRUG00000002010)	camkk1a (ENSTRUG00000002511)	p2rx1 (ENSTRUG00000002664)	dhx33 (ENSTRUG00000003395)	c1qbp (ENSTRUG00000032244)	ENSTRUG00000019697	ENSTRUG00000029327	SRRM3 (ENSTRUG00000026312) #20	ENSTRUG00000023773	hspb1 (ENSTRUG00000029481) #22	YWHAG (ENSTRUG00000029946) #23	ENSTRUG00000033240	ENSTRUG00000004899	supt4h1 (ENSTRUG00000027184)	ENSTRUG00000032218	ARHGAP26 (ENSTRUG00000006517)	ENSTRUG00000028194	yipf5 (ENSTRUG00000006257)	kctd16b (ENSTRUG00000006217)	GRXCR2 (ENSTRUG00000006167)	PLAC8L1 (ENSTRUG00000021575)	LARS1 (ENSTRUG00000005358)	RBM27 (ENSTRUG00000004518)	ENSTRUG00000029521	pou4f3 (ENSTRUG00000004433)
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Ballan wrasse	MODERN SPECIES	360	ruvbl2 (ENSLBEG00000004955)	SPNS2 (ENSLBEG00000005021)	spns3 (ENSLBEG00000005071)	ube2g1a (ENSLBEG00000005102)	ENSLBEG00000005120	ankfy1 (ENSLBEG00000005143)	cyb5d2 (ENSLBEG00000005202)	ZZEF1 (ENSLBEG00000005239)	ATP2A3 (ENSLBEG00000005442)	camkk1a (ENSLBEG00000005575)	p2rx1 (ENSLBEG00000005663)	dhx33 (ENSLBEG00000005703)	c1qbp (ENSLBEG00000005770)	ENSLBEG00000005781	ENSLBEG00000005813	hspb1 (ENSLBEG00000005892) #22
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Perciformes	ANCESTRAL SPECIES	25	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Perciformes_a	ANCESTRAL SPECIES	26	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Pike perch	MODERN SPECIES	25	ruvbl2 (ENSSLUG00000002309)	SPNS2 (ENSSLUG00000002498)	spns3 (ENSSLUG00000002607)	ube2g1a (ENSSLUG00000003043)	ankfy1 (ENSSLUG00000003223)	cyb5d2 (ENSSLUG00000003586)	ZZEF1 (ENSSLUG00000003643)	ATP2A3 (ENSSLUG00000003912)	camkk1a (ENSSLUG00000005442)	p2rx1 (ENSSLUG00000005464)	dhx33 (ENSSLUG00000005497)	c1qbp (ENSSLUG00000005510)	ENSSLUG00000005524	SRRM3 (ENSSLUG00000005547) #20	ENSSLUG00000005561	hspb1 (ENSSLUG00000005571) #22	YWHAG (ENSSLUG00000005582) #23	ENSSLUG00000005595	ENSSLUG00000005616	supt4h1 (ENSSLUG00000005652)	ENSSLUG00000005675	ENSSLUG00000005682	hpda (ENSSLUG00000005712)	MTMR4 (ENSSLUG00000005776)	ca4a (ENSSLUG00000006088)	GUSB (ENSSLUG00000006165)	ENSSLUG00000006227	ENSSLUG00000006231	vkorc1l1 (ENSSLUG00000006240)	nupr1a (ENSSLUG00000006249)	znhit3 (ENSSLUG00000006252)
Channel bull blenny	MODERN SPECIES	5	ruvbl2 (ENSCGOG00000017679)	SPNS2 (ENSCGOG00000017799)	spns3 (ENSCGOG00000018037)	ube2g1a (ENSCGOG00000018326)	ankfy1 (ENSCGOG00000018337)	cyb5d2 (ENSCGOG00000018382)	ZZEF1 (ENSCGOG00000018390)	ATP2A3 (ENSCGOG00000018525)	camkk1a (ENSCGOG00000018815)	p2rx1 (ENSCGOG00000018828)	ENSCGOG00000018972	dhx33 (ENSCGOG00000018973)	c1qbp (ENSCGOG00000018985)	MLXIPL (ENSCGOG00000018987)	ENSCGOG00000018999	hspb1 (ENSCGOG00000019001) #22	YWHAG (ENSCGOG00000019009) #23	ENSCGOG00000019016	ENSCGOG00000019019	supt4h1 (ENSCGOG00000019024)	ENSCGOG00000019030	ENSCGOG00000019031	hpda (ENSCGOG00000019035)	MTMR4 (ENSCGOG00000019100)	ca4a (ENSCGOG00000020775)	GUSB (ENSCGOG00000020803)	vkorc1l1 (ENSCGOG00000020997)	nupr1a (ENSCGOG00000020999)	znhit3 (ENSCGOG00000021000)	MYO19 (ENSCGOG00000021002)	pigw (ENSCGOG00000021079)
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000161127	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Lumpfish	MODERN SPECIES	5	ftr82 (ENSCLMG00005016080)	ftr83 (ENSCLMG00005016071)	ruvbl2 (ENSCLMG00005015825)	SPNS2 (ENSCLMG00005015818)	spns3 (ENSCLMG00005015673)	ube2g1a (ENSCLMG00005015661)	ankfy1 (ENSCLMG00005015633)	cyb5d2 (ENSCLMG00005015627)	ZZEF1 (ENSCLMG00005014272)	ATP2A3 (ENSCLMG00005012606)	camkk1a (ENSCLMG00005012605)	p2rx1 (ENSCLMG00005012604)	dhx33 (ENSCLMG00005012603)	c1qbp (ENSCLMG00005012602)	ENSCLMG00005012601	hspb1 (ENSCLMG00005012600) #22	YWHAG (ENSCLMG00005012599) #23	ENSCLMG00005012598	ENSCLMG00005012594	TSPOAP1 (ENSCLMG00005012580)	supt4h1 (ENSCLMG00005012578)	ENSCLMG00005012577	ENSCLMG00005012575	hpda (ENSCLMG00005012571)	MTMR4 (ENSCLMG00005007015)	ca4a (ENSCLMG00005006971)	GUSB (ENSCLMG00005006899)	vkorc1l1 (ENSCLMG00005006897)	nupr1a (ENSCLMG00005006896)	znhit3 (ENSCLMG00005006895)	MYO19 (ENSCLMG00005006826)
Stickleback	MODERN SPECIES	7	ftr82 (ENSGACG00000020218)	ftr83 (ENSGACG00000020219)	ruvbl2 (ENSGACG00000020220)	ENSGACG00000020221	spns3 (ENSGACG00000020222)	ube2g1a (ENSGACG00000020223)	ankfy1 (ENSGACG00000020224)	ZZEF1 (ENSGACG00000020225)	ATP2A3 (ENSGACG00000020226)	camkk1a (ENSGACG00000020227)	p2rx1 (ENSGACG00000020228)	dhx33 (ENSGACG00000020229)	c1qbp (ENSGACG00000020230)	ENSGACG00000020231	ENSGACG00000020232	hspb1 (ENSGACG00000020233) #22	YWHAG (ENSGACG00000020234) #23	ENSGACG00000020235	ENSGACG00000020236	supt4h1 (ENSGACG00000020237)	hpda (ENSGACG00000020238)	MTMR4 (ENSGACG00000020239)	ca4a (ENSGACG00000020240)	GUSB (ENSGACG00000020241)	vkorc1l1 (ENSGACG00000020242)	nupr1a (ENSGACG00000020243)	znhit3 (ENSGACG00000020244)	MYO19 (ENSGACG00000020245)	pigw (ENSGACG00000020246)	ggnbp2 (ENSGACG00000020247)	dhrs11a (ENSGACG00000020248)
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
European seabass	MODERN SPECIES	4	ENSDLAG00005004822	ftr82 (ENSDLAG00005030863)	ftr83 (ENSDLAG00005006419)	ruvbl2 (ENSDLAG00005006447)	SPNS2 (ENSDLAG00005006555)	spns3 (ENSDLAG00005007225)	ube2g1a (ENSDLAG00005007318)	ankfy1 (ENSDLAG00005007356)	ZZEF1 (ENSDLAG00005007521)	cyb5d2 (ENSDLAG00005007451)	ATP2A3 (ENSDLAG00005008964)	camkk1a (ENSDLAG00005013872)	p2rx1 (ENSDLAG00005013903)	ENSDLAG00005014002	SRRM3 (ENSDLAG00005029670) #20	hspb1 (ENSDLAG00005033547) #22	ENSDLAG00005014140	YWHAG (ENSDLAG00005026565) #23	ENSDLAG00005014163	ENSDLAG00005014208	supt4h1 (ENSDLAG00005034560)	ENSDLAG00005014800	ENSDLAG00005014809	MTMR4 (ENSDLAG00005014914)	hpda (ENSDLAG00005014835)	ca4a (ENSDLAG00005033961)	ENSDLAG00005010460	vkorc1l1 (ENSDLAG00005028451)	znhit3 (ENSDLAG00005029042)	MYO19 (ENSDLAG00005005255)	ggnbp2 (ENSDLAG00005005244)
Large yellow croaker	MODERN SPECIES	493	ftr83 (ENSLCRG00005011921)	ruvbl2 (ENSLCRG00005011956)	SPNS2 (ENSLCRG00005012130)	spns3 (ENSLCRG00005012154)	ube2g1a (ENSLCRG00005012160)	ENSLCRG00005012184	ankfy1 (ENSLCRG00005012189)	cyb5d2 (ENSLCRG00005012316)	ZZEF1 (ENSLCRG00005012322)	ATP2A3 (ENSLCRG00005012419)	camkk1a (ENSLCRG00005013515)	p2rx1 (ENSLCRG00005013516)	dhx33 (ENSLCRG00005013520)	c1qbp (ENSLCRG00005013521)	ENSLCRG00005013524	hspb1 (ENSLCRG00005013529) #22	YWHAG (ENSLCRG00005013531) #23	ENSLCRG00005013532	ENSLCRG00005013533	supt4h1 (ENSLCRG00005013536)	ENSLCRG00005013537	hpda (ENSLCRG00005013542)	MTMR4 (ENSLCRG00005013710)	ca4a (ENSLCRG00005016590)	GUSB (ENSLCRG00005016592)	vkorc1l1 (ENSLCRG00005016608)	nupr1a (ENSLCRG00005016610)	znhit3 (ENSLCRG00005016611)	MYO19 (ENSLCRG00005016615)	pigw (ENSLCRG00005012237)	ggnbp2 (ENSLCRG00005012242)
Gilthead seabream	MODERN SPECIES	4	ftr83 (ENSSAUG00010004994)	ruvbl2 (ENSSAUG00010004060)	SPNS2 (ENSSAUG00010004050)	spns3 (ENSSAUG00010003638)	ube2g1a (ENSSAUG00010003552)	ankfy1 (ENSSAUG00010003524)	cyb5d2 (ENSSAUG00010003511)	ZZEF1 (ENSSAUG00010002682)	ATP2A3 (ENSSAUG00010002421)	camkk1a (ENSSAUG00010002379)	p2rx1 (ENSSAUG00010002372)	dhx33 (ENSSAUG00010002363)	c1qbp (ENSSAUG00010002352)	ENSSAUG00010002153	SRRM3 (ENSSAUG00010002126) #20	hspb1 (ENSSAUG00010002121) #22	YWHAG (ENSSAUG00010002117) #23	ENSSAUG00010002112	ENSSAUG00010002091	supt4h1 (ENSSAUG00010002081)	ENSSAUG00010002075	ENSSAUG00010002069	hpda (ENSSAUG00010002041)	MTMR4 (ENSSAUG00010001783)	ca4a (ENSSAUG00010001721)	GUSB (ENSSAUG00010001569)	GUSB (ENSSAUG00010001515)	vkorc1l1 (ENSSAUG00010001495)	nupr1a (ENSSAUG00010025320)	znhit3 (ENSSAUG00010025319)	MYO19 (ENSSAUG00010025247)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Aplocheiloidei	ANCESTRAL SPECIES	33	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Mangrove rivulus	MODERN SPECIES	22	ftr83 (ENSKMAG00000014369)	ruvbl2 (ENSKMAG00000014273)	SPNS2 (ENSKMAG00000014193)	spns3 (ENSKMAG00000014148)	ube2g1a (ENSKMAG00000014121)	ankfy1 (ENSKMAG00000014039)	cyb5d2 (ENSKMAG00000013997)	ZZEF1 (ENSKMAG00000013876)	ATP2A3 (ENSKMAG00000013769)	camkk1a (ENSKMAG00000013707)	p2rx1 (ENSKMAG00000013653)	dhx33 (ENSKMAG00000013595)	c1qbp (ENSKMAG00000013558)	ENSKMAG00000013527	SRRM3 (ENSKMAG00000013495) #20	hspb1 (ENSKMAG00000013453) #22	YWHAG (ENSKMAG00000013441) #23	ENSKMAG00000013416	ENSKMAG00000013190	supt4h1 (ENSKMAG00000013119)	ENSKMAG00000013104	hpda (ENSKMAG00000013060)	MTMR4 (ENSKMAG00000012965)	ca4a (ENSKMAG00000012903)	ENSKMAG00000012887	GUSB (ENSKMAG00000012823)	vkorc1l1 (ENSKMAG00000012786)	nupr1a (ENSKMAG00000012775)	znhit3 (ENSKMAG00000012759)	MYO19 (ENSKMAG00000012705)	pigw (ENSKMAG00000012688)
Turquoise killifish	MODERN SPECIES	1620	SPNS2 (ENSNFUG00015024745)	spns3 (ENSNFUG00015024757)	UBE2G1A (ENSNFUG00015024764)	ANKFY1 (ENSNFUG00015024783)	ENSNFUG00015024793	CYB5D2 (ENSNFUG00015024796)	ZZEF1 (ENSNFUG00015024809)	ATP2A3 (ENSNFUG00015024852)	ENSNFUG00015024935	CAMKK1 (ENSNFUG00015024939)	P2RX1 (ENSNFUG00015024942)	C1QBP (ENSNFUG00015024961)	CT573103.1 (ENSNFUG00015024964)	SRRM3 (ENSNFUG00015012502) #20	ENSNFUG00015012510	HSPB1 (ENSNFUG00015012516) #22	YWHAG (ENSNFUG00015012521) #23	ENSNFUG00015012522	ENSNFUG00015012531	ENSNFUG00015012560	SUPT4H1 (ENSNFUG00015012564)	ENSNFUG00015012570	ENSNFUG00015012579	hpda (ENSNFUG00015012600)	MTMR4 (ENSNFUG00015012771)	CA4A (ENSNFUG00015013892)	Nfu_g_1_022203 (ENSNFUG00015013910)	ENSNFUG00015013914	ENSNFUG00015013918	GUSB (ENSNFUG00015013949)	vkorc1l1 (ENSNFUG00015014922)
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000169226	ENSGT00940000175931	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
NAME_4	ANCESTRAL SPECIES	5													ENSGT00940000159210	ENSGT00940000169226	ENSGT00940000175931	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00970000197055	ENSGT00940000157382
Mummichog	DUPLICATION
Mummichog	MODERN SPECIES	2218												ENSFHEG00000018096	ENSFHEG00000018112	ENSFHEG00000018122	hspb1 (ENSFHEG00000018125) #22	hspb1 (ENSFHEG00000018134) #22	ENSFHEG00000018144	ENSFHEG00000018156	YWHAG (ENSFHEG00000018168) #23	ENSFHEG00000018187	snx16 (ENSFHEG00000018198)	ENSFHEG00000018207	WWP1 (ENSFHEG00000018259)	rmdn1 (ENSFHEG00000018279)	cpne3 (ENSFHEG00000018298)	cpne3 (ENSFHEG00000018413)	cpne3 (ENSFHEG00000018465)	idi1 (ENSFHEG00000018499)	wdr37 (ENSFHEG00000018542)	ENSFHEG00000018564	ENSFHEG00000000478
Mummichog	MODERN SPECIES	2218													ENSFHEG00000018096	ENSFHEG00000018112	ENSFHEG00000018122	hspb1 (ENSFHEG00000018125) #22	hspb1 (ENSFHEG00000018134) #22	ENSFHEG00000018144	ENSFHEG00000018156	YWHAG (ENSFHEG00000018168) #23	ENSFHEG00000018187	snx16 (ENSFHEG00000018198)	ENSFHEG00000018207	WWP1 (ENSFHEG00000018259)	rmdn1 (ENSFHEG00000018279)	cpne3 (ENSFHEG00000018298)	cpne3 (ENSFHEG00000018413)	cpne3 (ENSFHEG00000018465)	idi1 (ENSFHEG00000018499)	wdr37 (ENSFHEG00000018542)	ENSFHEG00000018564
Sheepshead minnow	MODERN SPECIES	403									zgc:110540 (ENSCVAG00000000642)	ENSCVAG00000014433	PWWP2A (ENSCVAG00000014414)	ENSCVAG00000014411	slc23a1 (ENSCVAG00000014398)	mat2b (ENSCVAG00000014345)	ENSCVAG00000014322	hspb1 (ENSCVAG00000014312) #22	YWHAG (ENSCVAG00000014302) #23	ENSCVAG00000014295	ENSCVAG00000014265	supt4h1 (ENSCVAG00000014190)	ENSCVAG00000014169	ENSCVAG00000014156	hpda (ENSCVAG00000014147)	MTMR4 (ENSCVAG00000014065)	ca4a (ENSCVAG00000014028)	ENSCVAG00000014022	GUSB (ENSCVAG00000014013)	vkorc1l1 (ENSCVAG00000013978)	nupr1a (ENSCVAG00000013970)	ENSCVAG00000000352	MYO19 (ENSCVAG00000013931)
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000175931	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Poecilia	ANCESTRAL SPECIES	7	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000175931	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
NAME_6	ANCESTRAL SPECIES	16	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000176156	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Amazon molly	MODERN SPECIES	344	ftr83 (ENSPFOG00000012268)	ruvbl2 (ENSPFOG00000012154)	SPNS2 (ENSPFOG00000012057)	spns3 (ENSPFOG00000011784)	ube2g1a (ENSPFOG00000011752)	ankfy1 (ENSPFOG00000011523)	cyb5d2 (ENSPFOG00000011722)	ZZEF1 (ENSPFOG00000010928)	ATP2A3 (ENSPFOG00000010142)	camkk1a (ENSPFOG00000009838)	p2rx1 (ENSPFOG00000009666)	dhx33 (ENSPFOG00000009426)	c1qbp (ENSPFOG00000009344)	MLXIPL (ENSPFOG00000009039)	SRRM3 (ENSPFOG00000009007) #20	hspb1 (ENSPFOG00000008995) #22	YWHAG (ENSPFOG00000008978) #23	ENSPFOG00000023216
Sailfin molly	MODERN SPECIES	220														ENSPLAG00000012584	ENSPLAG00000012570	hspb1 (ENSPLAG00000012554) #22	YWHAG (ENSPLAG00000012552) #23	ENSPLAG00000012540	ENSPLAG00000012520	supt4h1 (ENSPLAG00000012498)	ENSPLAG00000012480	ENSPLAG00000012478	hpda (ENSPLAG00000012464)	MTMR4 (ENSPLAG00000012425)	ca4a (ENSPLAG00000012366)
Guppy	MODERN SPECIES	444	ruvbl2 (ENSPREG00000008743)	SPNS2 (ENSPREG00000008723)	spns3 (ENSPREG00000008650)	ube2g1a (ENSPREG00000008552)	ankfy1 (ENSPREG00000008492)	cyb5d2 (ENSPREG00000008466)	ENSPREG00000008432	ATP2A3 (ENSPREG00000008353)	camkk1a (ENSPREG00000008290)	p2rx1 (ENSPREG00000008269)	dhx33 (ENSPREG00000008239)	c1qbp (ENSPREG00000008222)	MLXIPL (ENSPREG00000008173)	SRRM3 (ENSPREG00000008138) #20	ENSPREG00000008129	hspb1 (ENSPREG00000008107) #22	YWHAG (ENSPREG00000008093) #23	ENSPREG00000008083	ENSPREG00000008075	ENSPREG00000008052	supt4h1 (ENSPREG00000008031)	ENSPREG00000008017	ENSPREG00000008005	hpda (ENSPREG00000007971)	MTMR4 (ENSPREG00000007920)	ca4a (ENSPREG00000007362)	GUSB (ENSPREG00000007245)	vkorc1l1 (ENSPREG00000007215)	nupr1a (ENSPREG00000007199)	znhit3 (ENSPREG00000007180)	ENSPREG00000007167
Platyfish	MODERN SPECIES	2	SPNS2 (ENSXMAG00000005907)	spns3 (ENSXMAG00000005883)	ube2g1a (ENSXMAG00000021404)	ENSXMAG00000023117	ankfy1 (ENSXMAG00000005852)	cyb5d2 (ENSXMAG00000021541)	ZZEF1 (ENSXMAG00000005834)	ATP2A3 (ENSXMAG00000005755)	camkk1a (ENSXMAG00000005744)	p2rx1 (ENSXMAG00000005701)	dhx33 (ENSXMAG00000005679)	c1qbp (ENSXMAG00000005671)	ENSXMAG00000005667	SRRM3 (ENSXMAG00000005663) #20	ENSXMAG00000005659	hspb1 (ENSXMAG00000022192) #22	YWHAG (ENSXMAG00000026649) #23	ENSXMAG00000005653	ENSXMAG00000005635	supt4h1 (ENSXMAG00000005633)	ENSXMAG00000027768	ENSXMAG00000005632	hpda (ENSXMAG00000005613)	MTMR4 (ENSXMAG00000005583)	ca4a (ENSXMAG00000029936)	GUSB (ENSXMAG00000018222)	vkorc1l1 (ENSXMAG00000018219)	nupr1a (ENSXMAG00000020014)	znhit3 (ENSXMAG00000005575)	MYO19 (ENSXMAG00000005550)	pigw (ENSXMAG00000020013)
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00950000183089.c.a.k.b.b.j	ENSGT01100000263514.A.f.w.b	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000174983	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00950000183089.c.a.k.b.b.j	ENSGT01100000263559.A	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.n	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00940000155093.b	ENSGT00390000018434	ENSGT00390000003183	ENSGT00940000162439	ENSGT00940000157820.a.a	ENSGT00940000163900	ENSGT01020000230351.E.d	ENSGT00940000153556.B	ENSGT00940000162978.a.a.b	ENSGT00940000166102
Chinese medaka	MODERN SPECIES	1129	ankfy1 (ENSOSIG00000019919)	cyb5d2 (ENSOSIG00000019925)	ZZEF1 (ENSOSIG00000019949)	ATP2A3 (ENSOSIG00000020170)	ENSOSIG00000021956	camkk1a (ENSOSIG00000021963)	p2rx1 (ENSOSIG00000021966)	ENSOSIG00000021969	ENSOSIG00000021972	ENSOSIG00000021975	ENSOSIG00000021976	dhx33 (ENSOSIG00000021988)	c1qbp (ENSOSIG00000021992)	ENSOSIG00000021997	ENSOSIG00000022004	hspb1 (ENSOSIG00000022005) #22	YWHAG (ENSOSIG00000022008) #23	ENSOSIG00000022020	SPECC1 (ENSOSIG00000022044)	adora2b (ENSOSIG00000022048)	zswim7 (ENSOSIG00000022055)	ncor1 (ENSOSIG00000022073)	pigl (ENSOSIG00000022090)	CENPV (ENSOSIG00000022092)	UBB (ENSOSIG00000022094)	ENSOSIG00000022095	p2rx5 (ENSOSIG00000022107)	ruvbl2 (ENSOSIG00000022140)	ftr83 (ENSOSIG00000022204)	ftr82 (ENSOSIG00000022213)	atp5l (ENSOSIG00000022221)
Oryzias_b	ANCESTRAL SPECIES	160																ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i
Javanese ricefish	MODERN SPECIES	5	rps14 (ENSOJAG00000016410)	APBB3 (ENSOJAG00000016437)	ENSOJAG00000016447	camk2a (ENSOJAG00000016486)	ENSOJAG00000016629	ENSOJAG00000005970	ENSOJAG00000006008	ENSOJAG00000006027	CSF1R (ENSOJAG00000006055)	ENSOJAG00000006291	ttc1 (ENSOJAG00000006821)	pfdn1 (ENSOJAG00000006851)	ENSOJAG00000006864	ENSOJAG00000006871	ENSOJAG00000006886	hspb1 (ENSOJAG00000006902) #22	ENSOJAG00000006907	ENSOJAG00000007021	YWHAG (ENSOJAG00000007090) #23	ENSOJAG00000007119	ENSOJAG00000007132	ENSOJAG00000007156	ints2 (ENSOJAG00000007280)	ENSOJAG00000009589	ENSOJAG00000009597	ENSOJAG00000009652	zgc:110540 (ENSOJAG00000009727)	ENSOJAG00000009750	PWWP2A (ENSOJAG00000009835)	ENSOJAG00000010176	wnt11 (ENSOJAG00000010187)
Ovalentaria_B	ANCESTRAL SPECIES	26	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00940000178429	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00940000178429	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179.f	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Pseudocrenilabrinae	ANCESTRAL SPECIES	14														ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752.f	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	21														ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752.f	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Haplochromini	ANCESTRAL SPECIES	8														ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752.f	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Haplochromini_A	ANCESTRAL SPECIES	6												ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000169226	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752.f	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Haplochromini_B	ANCESTRAL SPECIES	26												ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000169226	ENSGT00960000186914	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752.f	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Zebra mbuna	MODERN SPECIES	1092	fez1 (ENSMZEG00005023717)	esama (ENSMZEG00005023721)	esama (ENSMZEG00005023722)	MSANTD2 (ENSMZEG00005023731)	robo3 (ENSMZEG00005023734)	ENSMZEG00005023739	tmem218 (ENSMZEG00005023743)	pknox2 (ENSMZEG00005023746)	PANX3 (ENSMZEG00005023749)	ENSMZEG00005023751	opcml (ENSMZEG00005023755)	ENSMZEG00005023757	ENSMZEG00005023759	ENSMZEG00005023762	ENSMZEG00005023763	hspb1 (ENSMZEG00005023765) #22	YWHAG (ENSMZEG00005023766) #23	ENSMZEG00005023768	ENSMZEG00005023770	ENSMZEG00005023775	supt4h1 (ENSMZEG00005023783)	ENSMZEG00005023785	RNF43 (ENSMZEG00005023788)	hpda (ENSMZEG00005023791)	MTMR4 (ENSMZEG00005023795)	ca4a (ENSMZEG00005023800)	GUSB (ENSMZEG00005023801)	ENSMZEG00005023804	vkorc1l1 (ENSMZEG00005023805)	nupr1a (ENSMZEG00005023806)	znhit3 (ENSMZEG00005023807)
Eastern happy	MODERN SPECIES	1	hyou1 (ENSACLG00000004327)	vps11 (ENSACLG00000004406)	ENSACLG00000004459	ENSACLG00000004523	ENSACLG00000004539	akt2l (ENSACLG00000004632)	ENSACLG00000004726	CBLB (ENSACLG00000004741)	ENSACLG00000004866	alcama (ENSACLG00000004991)	ZPLD1 (ENSACLG00000005045)	ENSACLG00000005111	SRRM3 (ENSACLG00000005269) #20	ENSACLG00000005304	ENSACLG00000005306	hspb1 (ENSACLG00000005318) #22	YWHAG (ENSACLG00000005342) #23	ENSACLG00000005349	ENSACLG00000005363	supt4h1 (ENSACLG00000005475)	ENSACLG00000005743	hpda (ENSACLG00000005754)	MTMR4 (ENSACLG00000005778)	ca4a (ENSACLG00000005855)	GUSB (ENSACLG00000005864)	vkorc1l1 (ENSACLG00000006263)	nupr1a (ENSACLG00000006268)	znhit3 (ENSACLG00000006281)	MYO19 (ENSACLG00000006286)	pigw (ENSACLG00000006310)	ggnbp2 (ENSACLG00000006317)
P. nyererei	MODERN SPECIES	375														ENSPNYG00000016708	ENSPNYG00000016724	hspb1 (ENSPNYG00000016744) #22	YWHAG (ENSPNYG00000016757) #23	ENSPNYG00000016764	ENSPNYG00000016783	ENSPNYG00000016804	supt4h1 (ENSPNYG00000016837)	ENSPNYG00000016853	RNF43 (ENSPNYG00000016870)	hpda (ENSPNYG00000016877)	MTMR4 (ENSPNYG00000016931)	ca4a (ENSPNYG00000016968)	GUSB (ENSPNYG00000017001)	vkorc1l1 (ENSPNYG00000017038)	nupr1a (ENSPNYG00000017053)	znhit3 (ENSPNYG00000017092)	MYO19 (ENSPNYG00000017112)
Burton s mouthbrooder	MODERN SPECIES	296	ercc6l2 (ENSHBUG00000004419)	ptch1 (ENSHBUG00000004492)	fancc (ENSHBUG00000004521)	AOPEP (ENSHBUG00000004548)	DOCK8 (ENSHBUG00000004748)	cbwd (ENSHBUG00000004792)	pgm5 (ENSHBUG00000004830)	ZSWIM6 (ENSHBUG00000004894)	smim15 (ENSHBUG00000004906)	ndufaf2 (ENSHBUG00000004931)	ercc8 (ENSHBUG00000004984)	elovl7a (ENSHBUG00000005012)	ENSHBUG00000005031	ENSHBUG00000005037	SRRM3 (ENSHBUG00000005061) #20	hspb1 (ENSHBUG00000005070) #22	YWHAG (ENSHBUG00000005085) #23
Lyretail cichlid	MODERN SPECIES	354														ENSNBRG00000016249	ENSNBRG00000016235	hspb1 (ENSNBRG00000016230) #22	YWHAG (ENSNBRG00000016216) #23	ENSNBRG00000016197	ENSNBRG00000016178	ENSNBRG00000016164	supt4h1 (ENSNBRG00000016146)	ENSNBRG00000016128	RNF43 (ENSNBRG00000016111)	hpda (ENSNBRG00000016078)	MTMR4 (ENSNBRG00000016026)	ca4a (ENSNBRG00000016006)	GUSB (ENSNBRG00000015982)	vkorc1l1 (ENSNBRG00000015976)	nupr1a (ENSNBRG00000015963)	znhit3 (ENSNBRG00000015940)	ENSNBRG00000015924
Nile tilapia	MODERN SPECIES	1	ENSONIG00000012882	glra4b (ENSONIG00000012879)	aifm1 (ENSONIG00000012871)	ENSONIG00000012870	ENSONIG00000031583	amer1 (ENSONIG00000040456)	ZC3H12B (ENSONIG00000012867)	msna (ENSONIG00000012861)	ENSONIG00000012860	ENSONIG00000030243	ENSONIG00000012854	ENSONIG00000035301	ENSONIG00000037491	ENSONIG00000039009	SRRM3 (ENSONIG00000012732) #20	hspb1 (ENSONIG00000012734) #22	YWHAG (ENSONIG00000012735) #23	ENSONIG00000012737	TSPOAP1 (ENSONIG00000012739)	supt4h1 (ENSONIG00000043158)	ENSONIG00000039780	ENSONIG00000038681	hpda (ENSONIG00000012748)	MTMR4 (ENSONIG00000012753)	ca4a (ENSONIG00000012757)	GUSB (ENSONIG00000012762)	vkorc1l1 (ENSONIG00000012771)	ENSONIG00000033753	ENSONIG00000031767	nupr1a (ENSONIG00000041561)	znhit3 (ENSONIG00000012772)
Midas cichlid	MODERN SPECIES	26					ENSACIG00000013047	ankfy1 (ENSACIG00000012998)	cyb5d2 (ENSACIG00000012949)	ZZEF1 (ENSACIG00000012837)	ATP2A3 (ENSACIG00000012794)	camkk1a (ENSACIG00000012723)	p2rx1 (ENSACIG00000012631)	dhx33 (ENSACIG00000012591)	c1qbp (ENSACIG00000012577)	ENSACIG00000012490	ENSACIG00000012473	hspb1 (ENSACIG00000012404) #22	YWHAG (ENSACIG00000012390) #23	ENSACIG00000012382	ENSACIG00000012372	ENSACIG00000012193	supt4h1 (ENSACIG00000012162)	ENSACIG00000012140	ENSACIG00000012093	hpda (ENSACIG00000012075)	MTMR4 (ENSACIG00000011997)	ca4a (ENSACIG00000011946)	GUSB (ENSACIG00000011922)	vkorc1l1 (ENSACIG00000011910)	nupr1a (ENSACIG00000011888)	znhit3 (ENSACIG00000011858)	ENSACIG00000011845
Pomacentridae	ANCESTRAL SPECIES	42	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT01060000250877	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00940000164475	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000157189.c	ENSGT00940000159359
Amphiprion	ANCESTRAL SPECIES	72	ENSGT00940000162978.a.a.b	ENSGT00940000153556.B	ENSGT00390000005976.a.a.b	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000159210	ENSGT00940000169226	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00940000157189.c	ENSGT00940000182231	ENSGT00940000159359
Orange clownfish	MODERN SPECIES	6	ruvbl2 (ENSAPEG00000014402)	SPNS2 (ENSAPEG00000014337)	spns3 (ENSAPEG00000014311)	ube2g1a (ENSAPEG00000014285)	ankfy1 (ENSAPEG00000014177)	cyb5d2 (ENSAPEG00000014167)	ZZEF1 (ENSAPEG00000013980)	ATP2A3 (ENSAPEG00000013892)	ENSAPEG00000013838	camkk1a (ENSAPEG00000013729)	p2rx1 (ENSAPEG00000013679)	dhx33 (ENSAPEG00000013599)	c1qbp (ENSAPEG00000013414)	ENSAPEG00000013328	ENSAPEG00000013307	hspb1 (ENSAPEG00000013295) #22	YWHAG (ENSAPEG00000013287) #23	ENSAPEG00000013272	ENSAPEG00000013231	ENSAPEG00000013189	supt4h1 (ENSAPEG00000013170)	ENSAPEG00000013152	ENSAPEG00000013140	hpda (ENSAPEG00000013058)	MTMR4 (ENSAPEG00000012940)	ca4a (ENSAPEG00000012858)	ENSAPEG00000012846	alcama (ENSAPEG00000012831)	ENSAPEG00000012776	ENSAPEG00000012718	ENSAPEG00000012698
Clown anemonefish	MODERN SPECIES	786														ENSAOCG00000022122	TMEM70 (ENSAOCG00000022127)	hspb1 (ENSAOCG00000002578) #22	YWHAG (ENSAOCG00000022183) #23	ENSAOCG00000022205	ENSAOCG00000022317	supt4h1 (ENSAOCG00000022349)	ENSAOCG00000022362	ENSAOCG00000022381	hpda (ENSAOCG00000022425)	ENSAOCG00000022451	MTMR4 (ENSAOCG00000022510)	ca4a (ENSAOCG00000022543)	ENSAOCG00000022549	alcama (ENSAOCG00000022564)	ENSAOCG00000022578
Spiny chromis	MODERN SPECIES	672									ENSAPOG00000010368	camkk1a (ENSAPOG00000010216)	p2rx1 (ENSAPOG00000010175)	dhx33 (ENSAPOG00000010132)	c1qbp (ENSAPOG00000010074)	ENSAPOG00000010036	SRRM3 (ENSAPOG00000000288) #20	hspb1 (ENSAPOG00000009968) #22	YWHAG (ENSAPOG00000009936) #23	ENSAPOG00000009921
Bicolor damselfish	MODERN SPECIES	915															ENSSPAG00000017758	hspb1 (ENSSPAG00000017771) #22	YWHAG (ENSSPAG00000017778) #23	ENSSPAG00000017786	ENSSPAG00000017799	ENSSPAG00000017810	supt4h1 (ENSSPAG00000017849)	ENSSPAG00000017870	RNF43 (ENSSPAG00000017881)	hpda (ENSSPAG00000017926)	MTMR4 (ENSSPAG00000017987)	ca4a (ENSSPAG00000018081)
Tiger tail seahorse	MODERN SPECIES	455	ftr83 (ENSHCOG00000012070)	ruvbl2 (ENSHCOG00000012047)	SPNS2 (ENSHCOG00000012022)	spns3 (ENSHCOG00000011991)	ube2g1a (ENSHCOG00000011959)	ankfy1 (ENSHCOG00000011942)	cyb5d2 (ENSHCOG00000011921)	ZZEF1 (ENSHCOG00000011860)	ATP2A3 (ENSHCOG00000011269)	camkk1a (ENSHCOG00000011215)	p2rx1 (ENSHCOG00000011183)	dhx33 (ENSHCOG00000011161)	c1qbp (ENSHCOG00000011124)	ENSHCOG00000011104	ENSHCOG00000011092	hspb1 (ENSHCOG00000011077) #22	YWHAG (ENSHCOG00000011071) #23	ENSHCOG00000011053	ENSHCOG00000011006	supt4h1 (ENSHCOG00000010739)	ENSHCOG00000010722	hpda (ENSHCOG00000010695)	MTMR4 (ENSHCOG00000010677)	ca4a (ENSHCOG00000010648)	ENSHCOG00000010580	frmd8 (ENSHCOG00000010570)	rom1a (ENSHCOG00000010559)	zfpl1 (ENSHCOG00000010546)	FLRT1 (ENSHCOG00000010522)	rps6ka4 (ENSHCOG00000010506)	stip1 (ENSHCOG00000010419)
Pinecone sodierfish	MODERN SPECIES	5	VMP1 (ENSMMDG00005013062)	ptrh2 (ENSMMDG00005013065)	cltca (ENSMMDG00005013120)	ENSMMDG00005014702	ENSMMDG00005014703	AKAP10 (ENSMMDG00005014713)	zgc:85789 (ENSMMDG00005015648)	aspa (ENSMMDG00005015653)	ABR (ENSMMDG00005015752)	ENSMMDG00005018840	TIMM22 (ENSMMDG00005018841)	dhx33 (ENSMMDG00005018843)	c1qbp (ENSMMDG00005018846)	ENSMMDG00005018853	ENSMMDG00005018862	hspb1 (ENSMMDG00005018865) #22	YWHAG (ENSMMDG00005018868) #23	ENSMMDG00005018869	ENSMMDG00005018895	supt4h1 (ENSMMDG00005019113)	ENSMMDG00005019123	ENSMMDG00005019125	hpda (ENSMMDG00005019129)	MTMR4 (ENSMMDG00005019154)	ca4a (ENSMMDG00005019779)	GUSB (ENSMMDG00005019788)	vkorc1l1 (ENSMMDG00005019854)	nupr1a (ENSMMDG00005019856)	znhit3 (ENSMMDG00005019857)	MYO19 (ENSMMDG00005019863)	pigw (ENSMMDG00005020263)
Cod	MODERN SPECIES	20	pigl (ENSGMOG00000010655)	CENPV (ENSGMOG00000010648)	ubb (ENSGMOG00000023766)	ube2g1a (ENSGMOG00000012306)	ankfy1 (ENSGMOG00000012308)	cyb5d2 (ENSGMOG00000012320)	ZZEF1 (ENSGMOG00000012326)	ATP2A3 (ENSGMOG00000012338)	camkk1a (ENSGMOG00000012343)	p2rx1 (ENSGMOG00000012347)	ENSGMOG00000012350	c1qbp (ENSGMOG00000012353)	ENSGMOG00000012357	ENSGMOG00000036814	ENSGMOG00000012369	hspb1 (ENSGMOG00000035191) #22	mtnr1bb (ENSGMOG00000030438)	ENSGMOG00000015858	ENSGMOG00000015828	TYR (ENSGMOG00000015820)	grm5a (ENSGMOG00000015781)	RAB38 (ENSGMOG00000015772)	ENSGMOG00000015765	ENSGMOG00000028766	ENSGMOG00000023501	ENSGMOG00000015723	TIAM1 (ENSGMOG00000015633)	sod1 (ENSGMOG00000015265)	SCAF4 (ENSGMOG00000015188)	ENSGMOG00000015028	MIS18A (ENSGMOG00000015013)
Otomorpha	ANCESTRAL SPECIES	23	ENSGT00940000178429	ENSGT00390000005976.a.a.a	ENSGT00940000155228	ENSGT00940000156179	ENSGT00940000160156	ENSGT00940000155045	ENSGT00940000155668.j	ENSGT00940000154890.a.a	ENSGT01020000230351.C	ENSGT00940000156747	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127.d	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.b #23	ENSGT00950000183145.D.h.b	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382
Clupeiformes	ANCESTRAL SPECIES	215													ENSGT00950000183145.D.h.b	ENSGT00940000162625 #20	ENSGT00980000199127.d	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.b #23	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00390000010822	ENSGT00940000157382	ENSGT00390000013520
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	16	SUPT20H (ENSDCDG00000003878)	ugt5d1 (ENSDCDG00000004714)	POSTN (ENSDCDG00000004746)	trpc4a (ENSDCDG00000004760)	ufm1 (ENSDCDG00000004781)	frem2a (ENSDCDG00000004818)	trim47 (ENSDCDG00000004963)	ENSDCDG00000004965	trim3b (ENSDCDG00000004975)	fhdc3 (ENSDCDG00000005195)	arfip2b (ENSDCDG00000005217)	ENSDCDG00000005238	ENSDCDG00000005246	ENSDCDG00000005249	ENSDCDG00000005253	hspb1 (ENSDCDG00000005255) #22	YWHAG (ENSDCDG00000005258) #23	ENSDCDG00000005260	ENSDCDG00000005273	supt4h1 (ENSDCDG00000005283)	RSPH6A (ENSDCDG00000005287)	RNF43 (ENSDCDG00000005289)	hpda (ENSDCDG00000005319)	MTMR4 (ENSDCDG00000005559)	ca4a (ENSDCDG00000006968)	GUSB (ENSDCDG00000007078)	GUSB (ENSDCDG00000007658)	vkorc1l1 (ENSDCDG00000007757)	nupr1a (ENSDCDG00000007759)	znhit3 (ENSDCDG00000007763)	MYO19 (ENSDCDG00000007794)
Denticle herring	MODERN SPECIES	324														SRRM3 (ENSDCDG00000024674) #20	ENSDCDG00000024679	hspb1 (ENSDCDG00000024684) #22	YWHAG (ENSDCDG00000024687) #23	ENSDCDG00000024690	ENSDCDG00000024706	supt4h1 (ENSDCDG00000024748)	RSPH6A (ENSDCDG00000024753)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	25	ENSCHAG00000019869	mmp23bb (ENSCHAG00000019802)	ap2m1b (ENSCHAG00000019708)	DVL3 (ENSCHAG00000019103)	rnpepl1 (ENSCHAG00000018769)	abcc5 (ENSCHAG00000017969)	rpl35a (ENSCHAG00000017909)	iqcg (ENSCHAG00000017893)	LRCH3 (ENSCHAG00000017663)	ABCF3 (ENSCHAG00000017563)	ENSCHAG00000017549	ENSCHAG00000017542	ENSCHAG00000017481	polr2d (ENSCHAG00000017440)	ENSCHAG00000017424	HSPB1 (ENSCHAG00000017355) #22	YWHAG (ENSCHAG00000017350) #23	ca4b (ENSCHAG00000017336)	ENSCHAG00000017330	dhrs11b.1 (ENSCHAG00000017281)	rab34a (ENSCHAG00000017211)	tlcd1 (ENSCHAG00000017206)	nek8 (ENSCHAG00000017148)	traf4a (ENSCHAG00000017100)	ENSCHAG00000017068	ENSCHAG00000017054	SAMD4B (ENSCHAG00000016717)	zgc:172323 (ENSCHAG00000016645)	ENSCHAG00000016638	zgc:172323 (ENSCHAG00000016570)	zgc:172323 (ENSCHAG00000016487)
Atlantic herring	MODERN SPECIES	24	samsn1b (ENSCHAG00000017308)	ENSCHAG00000017318	usp25 (ENSCHAG00000017367)	WSCD1 (ENSCHAG00000018625)	bhlha9 (ENSCHAG00000018632)	ABCG4 (ENSCHAG00000018688)	SPNS2 (ENSCHAG00000019374)	ruvbl2 (ENSCHAG00000019655)	ZZEF1 (ENSCHAG00000019997)	ATP2A3 (ENSCHAG00000001494)	camkk1a (ENSCHAG00000005451)	p2rx1 (ENSCHAG00000005574)	dhx33 (ENSCHAG00000006024)	c1qbp (ENSCHAG00000006549)	ENSCHAG00000006582	hspb1 (ENSCHAG00000006742) #22	ENSCHAG00000006754	ywhag1 (ENSCHAG00000006782) #23	ENSCHAG00000006811	ENSCHAG00000006898	supt4h1 (ENSCHAG00000006986)	HSF5 (ENSCHAG00000007039)	RNF43 (ENSCHAG00000007072)	hpda (ENSCHAG00000007096)	MTMR4 (ENSCHAG00000007664)	ca4a (ENSCHAG00000013297)	GUSB (ENSCHAG00000013308)	vkorc1l1 (ENSCHAG00000013357)	nupr1a (ENSCHAG00000013373)	MYO19 (ENSCHAG00000013412)	pigw (ENSCHAG00000013980)
Otophysi	ANCESTRAL SPECIES	14	ENSGT00940000158512.b	ENSGT00530000063811.A.a.a	ENSGT00390000013800	ENSGT00940000164254.b	ENSGT00560000077232.B.g.b	ENSGT00940000166243	ENSGT00840000129887.g.b	ENSGT00390000009552	ENSGT00390000013520	ENSGT00940000157382	ENSGT00390000010822	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00940000155882.a.a #22	ENSGT00980000199127.d	ENSGT01090000260061.c.a.c.a.b.c #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00940000156747	ENSGT00390000017839
Cyprinoidei	ANCESTRAL SPECIES	16	ENSGT00940000153430.a.a.g	ENSGT00390000005492.d	ENSGT00940000165297.k.a.b	ENSGT00940000165297.k.a.a	ENSGT00940000166243	ENSGT00840000129887.g.b	ENSGT00390000009552	ENSGT00390000013520	ENSGT00940000157382	ENSGT00390000010822	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127.d	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.b.c #23	ENSGT00950000183145.D.h.b	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00940000156747	ENSGT00390000017839	ENSGT01030000234606.a.b.p
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	1141																ENSGT00940000155882.a.a.k #22	ENSGT01090000260061.c.a.c.a.b.c.a #23	ENSGT00950000183145.D.h.b.b
Goldfish	MODERN SPECIES	44	MAPKAP1 (ENSCARG00000003500)	ENSCARG00000003462	ENSCARG00000003454	ENSCARG00000003452	mvb12ba (ENSCARG00000003449)	ENSCARG00000003444	ENSCARG00000003428	dhrs11a (ENSCARG00000003420)	ggnbp2 (ENSCARG00000003392)	MYO19 (ENSCARG00000003294)	znhit3 (ENSCARG00000003273)	c1qbp (ENSCARG00000003270)	ENSCARG00000003226	ENSCARG00000003208	SRRM3 (ENSCARG00000003184) #20	hspb1 (ENSCARG00000003177) #22	ywhag1 (ENSCARG00000003174) #23	ENSCARG00000003167	ENSCARG00000003164	ENSCARG00000003161	ENSCARG00000003140	RALGPS1 (ENSCARG00000002209)	zbtb43 (ENSCARG00000001917)	lmx1ba (ENSCARG00000001912)	mvb12ba (ENSCARG00000001907)	ENSCARG00000001890	MAPKAP1 (ENSCARG00000001874)	ENSCARG00000001871	RABL6 (ENSCARG00000001866)	ENSCARG00000001864	TRAF2 (ENSCARG00000001854)
Cyprininae_a	ANCESTRAL SPECIES	701														ENSGT00940000159210.j	ENSGT00940000162625 #20	ENSGT00940000155882.a.a.k #22	ENSGT00980000199127.d	ENSGT01090000260061.c.a.c.a.b.c.a #23	ENSGT00950000183145.D.h.b.b
Common carp reference	MODERN SPECIES	7	apooa (ENSCCRG00000069490)	sat1a.2 (ENSCCRG00000035264)	prdx4 (ENSCCRG00000035260)	srrt (ENSCCRG00000034646)	ENSCCRG00000057331	ENSCCRG00000035256	ENSCCRG00000035246	ENSCCRG00000035241	dhrs11a (ENSCCRG00000034601)	ggnbp2 (ENSCCRG00000034572)	pigw (ENSCCRG00000059201)	znhit3 (ENSCCRG00000055115)	c1qbp (ENSCCRG00000030531)	ENSCCRG00000004896	SRRM3 (ENSCCRG00000078835) #20	hspb1 (ENSCCRG00000069777) #22	ENSCCRG00000035029	ywhag1 (ENSCCRG00000055965) #23	ENSCCRG00000079192	ENSCCRG00000026968	supt4h1 (ENSCCRG00000062668)	ENSCCRG00000032564	hpda (ENSCCRG00000032574)	ENSCCRG00000020705	ca4a (ENSCCRG00000067028)	ENSCCRG00000062140	vkorc1l1 (ENSCCRG00000056254)	nupr1a (ENSCCRG00000059775)	rplp0 (ENSCCRG00000047627)	ENSCCRG00000066708	ENSCCRG00000068913
Golden-line barbel	MODERN SPECIES	809	ENSSGRG00000041407	zgc:153704 (ENSSGRG00000041406)	ENSSGRG00000041405	apooa (ENSSGRG00000041404)	sat1a.2 (ENSSGRG00000041380)	znhit3 (ENSSGRG00000041374)	ENSSGRG00000041359	pigw (ENSSGRG00000041348)	ggnbp2 (ENSSGRG00000041311)	dhrs11a (ENSSGRG00000041308)	ENSSGRG00000041306	ENSSGRG00000041299	srrt (ENSSGRG00000041231)	ENSSGRG00000041216	ENSSGRG00000041212	hspb1 (ENSSGRG00000041206) #22	ywhag1 (ENSSGRG00000041195) #23	ENSSGRG00000041193
Cyprininae	ANCESTRAL SPECIES	25	ENSGT00390000009552	ENSGT00390000013520.f	ENSGT00940000157382.n.a	ENSGT00390000013520.e	ENSGT00940000157382.n.b	ENSGT00390000010822.b	ENSGT00390000018406.c	ENSGT00940000159210.j	ENSGT00940000157382.o	ENSGT00390000010822.a	ENSGT00390000018406.d	ENSGT00390000006416	ENSGT00940000159210.i	ENSGT00940000162625 #20	ENSGT00980000199127.d	ENSGT00940000155882.a.a.l #22	ENSGT01090000260061.c.a.c.a.b.c.b #23	ENSGT00950000183145.D.h.b.a	ENSGT00950000183203.d.d.p	ENSGT00390000018559.b	ENSGT00510000048674	ENSGT00940000154006.b.c.a	ENSGT00950000183203.d.d.o	ENSGT00390000018559.a	ENSGT00940000154006.b.c.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976.j.b	ENSGT00940000155690.b.a.c	ENSGT00390000001752.d	ENSGT00940000157044.q.b	ENSGT00940000167280.b
Goldfish	MODERN SPECIES	51	ENSCARG00000051931	sat1a.1 (ENSCARG00000051967)	prdx4 (ENSCARG00000052043)	srrt (ENSCARG00000052535)	ENSCARG00000054444	dhrs11a (ENSCARG00000054458)	ggnbp2 (ENSCARG00000054479)	pigw (ENSCARG00000054591)	MYO19 (ENSCARG00000054653)	znhit3 (ENSCARG00000055653)	c1qbp (ENSCARG00000055665)	rpain (ENSCARG00000055695)	ENSCARG00000055743	ENSCARG00000056336	ENSCARG00000056344	hspb1 (ENSCARG00000056371) #22	ywhag1 (ENSCARG00000056390) #23	ENSCARG00000056393	ENSCARG00000056410	ENSCARG00000056517	ENSCARG00000056545	supt4h1 (ENSCARG00000056575)	ENSCARG00000056602	ENSCARG00000056611	MTMR4 (ENSCARG00000056858)	ENSCARG00000063500	ca4a (ENSCARG00000063541)	GUSB (ENSCARG00000063562)	vkorc1l1 (ENSCARG00000063723)	nupr1a (ENSCARG00000063739)	ENSCARG00000063756
Cyprininae_a	ANCESTRAL SPECIES	306					ENSGT00840000129887.g.b.a	ENSGT00390000009552.a	ENSGT00390000013520.f	ENSGT00940000157382.n.a	ENSGT00390000010822.b	ENSGT00390000018406.c	ENSGT00940000157382.o	ENSGT00390000010822.a	ENSGT00390000018406.d	ENSGT00390000006416	ENSGT00940000159210.i	ENSGT00940000155882.a.a.l #22	ENSGT01090000260061.c.a.c.a.b.c.b #23	ENSGT00950000183145.D.h.b.a	ENSGT00950000183203.d.d.p	ENSGT00390000018559.b	ENSGT00510000048674	ENSGT00940000154006.b.d	ENSGT00940000154006.b.c.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976.j.b	ENSGT00940000155690.b.a.c	ENSGT00390000001752.d	ENSGT00940000157044.q.b	ENSGT00940000167280.b	ENSGT00950000183116.b.a.a.a.a.f	ENSGT00940000158976.j.a
Common carp reference	MODERN SPECIES	15	prdx4 (ENSCCRG00000067453)	srrt (ENSCCRG00000010285)	ENSCCRG00000034609	dhrs11a (ENSCCRG00000055687)	ggnbp2 (ENSCCRG00000034598)	pigw (ENSCCRG00000032662)	MYO19 (ENSCCRG00000032677)	znhit3 (ENSCCRG00000077670)	c1qbp (ENSCCRG00000058149)	rpain (ENSCCRG00000030523)	ENSCCRG00000073926	ENSCCRG00000074337 #20	ENSCCRG00000060619	ywhag1 (ENSCCRG00000067981) #23	ENSCCRG00000053391	hspb1 (ENSCCRG00000066100) #22	ENSCCRG00000049864	supt4h1 (ENSCCRG00000049874)	ENSCCRG00000049876	ENSCCRG00000024714	hpda (ENSCCRG00000024723)	ENSCCRG00000008625	MTMR4 (ENSCCRG00000030066)	ca4a (ENSCCRG00000030049)	ENSCCRG00000032437	vkorc1l1 (ENSCCRG00000079493)	ENSCCRG00000005946	nupr1a (ENSCCRG00000062347)	dhx33 (ENSCCRG00000072284)	rplp0 (ENSCCRG00000080758)	ENSCCRG00000047610
Golden-line barbel	MODERN SPECIES	141	zgc:153704 (ENSSGRG00000044659)	ENSSGRG00000044657	ENSSGRG00000044656	sat1a.1 (ENSSGRG00000044573)	prdx4 (ENSSGRG00000044559)	srrt (ENSSGRG00000044556)	ENSSGRG00000044553	dhrs11a (ENSSGRG00000044507)	ggnbp2 (ENSSGRG00000044184)	pigw (ENSSGRG00000044169)	MYO19 (ENSSGRG00000044151)	znhit3 (ENSSGRG00000044150)	c1qbp (ENSSGRG00000044148)	rpain (ENSSGRG00000044147)	ENSSGRG00000044146	hspb1 (ENSSGRG00000044144) #22	ywhag1 (ENSSGRG00000044142) #23	ENSSGRG00000044141	ENSSGRG00000044138	supt4h1 (ENSSGRG00000044126)	ENSSGRG00000044125	ENSSGRG00000044124	MTMR4 (ENSSGRG00000043906)	ca4a (ENSSGRG00000043894)	GUSB (ENSSGRG00000043893)	dhx33 (ENSSGRG00000043890)	rplp0 (ENSSGRG00000043854)	ENSSGRG00000043846	ENSSGRG00000043842	MCC (ENSSGRG00000043841)
Zebrafish	MODERN SPECIES	20	ENSDARG00000046092	ENSDARG00000108340	ENSDARG00000108953	ENSDARG00000046091	dhrs11a (ENSDARG00000046090)	ggnbp2 (ENSDARG00000055086)	pigw (ENSDARG00000079244)	MYO19 (ENSDARG00000073761)	znhit3 (ENSDARG00000023950)	c1qbp (ENSDARG00000039887)	rpain (ENSDARG00000063021)	ENSDARG00000104054	ENSDARG00000089107	ENSDARG00000110111	ENSDARG00000096920	hspb1 (ENSDARG00000041065) #22	ywhag1 (ENSDARG00000067626) #23	ENSDARG00000103792	supt4h1 (ENSDARG00000113969)	hsf5 (ENSDARG00000104686)	hpda (ENSDARG00000018351)	LZTS3 (ENSDARG00000098751)	hspa5 (ENSDARG00000103846)	rabepk (ENSDARG00000112165)	gng10 (ENSDARG00000104043)	RAB35 (ENSDARG00000102078)	CIT (ENSDARG00000089856)	ca4a (ENSDARG00000043589)	GUSB (ENSDARG00000063126)	vkorc1l1 (ENSDARG00000043644)	nupr1a (ENSDARG00000094300)
Characiphysae	ANCESTRAL SPECIES	65	ENSGT00530000063811.A.a.a	ENSGT00390000013800	ENSGT00940000164254.b	ENSGT00560000077232.B.g.b	ENSGT00940000166243	ENSGT00840000129887.g.b	ENSGT00390000009552	ENSGT00390000013520	ENSGT00940000157382	ENSGT00390000010822	ENSGT00390000018406	ENSGT00390000006416	ENSGT00940000159210	ENSGT00940000162625 #20	ENSGT00980000199127.d	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.b.c #23	ENSGT00950000183145.D.h.b	ENSGT00950000183145.D.i	ENSGT00950000183203.d.d	ENSGT00390000018559	ENSGT00510000048674	ENSGT00940000154006.b	ENSGT00530000063474.B.e.b	ENSGT00940000158976	ENSGT00940000155690.b.a.a	ENSGT00390000001752	ENSGT00940000157044	ENSGT00940000167280	ENSGT00940000156747	ENSGT00390000017839
Channel catfish	MODERN SPECIES	20	fam222b (ENSIPUG00000013462)	eral1 (ENSIPUG00000013409)	tbx6l (ENSIPUG00000013387)	flot2a (ENSIPUG00000013356)	dhrs11 (ENSIPUG00000012723)	GGNBP2 (ENSIPUG00000012675)	PIGW (ENSIPUG00000012660)	myo19 (ENSIPUG00000012625)	znhit3 (ENSIPUG00000012609)	c1qbp (ENSIPUG00000012598)	rpain (ENSIPUG00000012533)	ENSIPUG00000012479	srrm3 (ENSIPUG00000012467) #20	ENSIPUG00000012451	ENSIPUG00000012445	hspb1 (ENSIPUG00000012429) #22	ywhag1 (ENSIPUG00000012397) #23	ENSIPUG00000012354	zgc:112001 (ENSIPUG00000012340)	zgc:112001 (ENSIPUG00000012310)	ENSIPUG00000012304	ENSIPUG00000012287	zgc:112001 (ENSIPUG00000012267)	ENSIPUG00000012129	supt4h1 (ENSIPUG00000012062)	ENSIPUG00000012053	ENSIPUG00000012036	rnf43 (ENSIPUG00000012016)	hpda (ENSIPUG00000011930)	mtmr4 (ENSIPUG00000011795)	ca4a (ENSIPUG00000011745)
Characiphysae_b	ANCESTRAL SPECIES	14	ENSGT00940000160533	ENSGT00940000156265	ENSGT00940000153792.A	ENSGT00940000164885	ENSGT00390000006189	ENSGT00940000167693	ENSGT00940000170905	ENSGT00940000156028.s	ENSGT00390000007237.r	ENSGT00940000165734	ENSGT00940000158967	ENSGT00510000048072	ENSGT01090000261392	ENSGT00940000154890.a.b	ENSGT00980000199127.c	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.a #23	ENSGT00950000183203.d.c	ENSGT01090000260061.c.a.c.a.b.d #23	ENSGT00940000155690.b.b	ENSGT00840000129887.g.a	ENSGT00940000165341	ENSGT00940000165122	ENSGT00940000159645	ENSGT01010000222313.B.a	ENSGT00940000159297	ENSGT00940000158628	ENSGT00940000156751	ENSGT00940000164527.b	ENSGT00390000010789	ENSGT00940000164330
Electric eel	MODERN SPECIES	151	SHPK (ENSEEEG00000023713)	trpv1 (ENSEEEG00000023720)	FAM222B (ENSEEEG00000023725)	eral1 (ENSEEEG00000023729)	ENSEEEG00000023735	flot2a (ENSEEEG00000023743)	ENSEEEG00000023746	dhrs11a (ENSEEEG00000023747)	ggnbp2 (ENSEEEG00000023748)	pigw (ENSEEEG00000023751)	MYO19 (ENSEEEG00000023754)	znhit3 (ENSEEEG00000023757)	c1qbp (ENSEEEG00000023762)	rpain (ENSEEEG00000023771)	MLXIPL (ENSEEEG00000023773)	hspb1 (ENSEEEG00000000101) #22	ENSEEEG00000000113	ywhag1 (ENSEEEG00000000139) #23	ENSEEEG00000000182	ENSEEEG00000000257	supt4h1 (ENSEEEG00000000394)	ENSEEEG00000000404	ENSEEEG00000000407	hpda (ENSEEEG00000000413)	MTMR4 (ENSEEEG00000000811)	ca4a (ENSEEEG00000002021)	GUSB (ENSEEEG00000002023)	vkorc1l1 (ENSEEEG00000002028)	nupr1a (ENSEEEG00000002029)	dhx33 (ENSEEEG00000002030)	rplp0 (ENSEEEG00000002037)
Characoidei	ANCESTRAL SPECIES	12									ENSGT00940000165734	ENSGT00940000158967	ENSGT00940000172267	ENSGT00510000048072	ENSGT01090000261392	ENSGT00940000154890.a.b	ENSGT00980000199127.c	ENSGT00940000155882.a.a #22	ENSGT01090000260061.c.a.c.a.a.a #23	ENSGT00950000183203.d.c	ENSGT00940000155690.b.b	ENSGT00840000129887.g.a	ENSGT00940000165341	ENSGT00940000165122	ENSGT00940000159645	ENSGT01010000222313.B.a	ENSGT00940000159297	ENSGT00940000158628	ENSGT00940000156751	ENSGT00940000164527.b	ENSGT00390000010789	ENSGT00940000155585.a	ENSGT00950000182987.c.a.b.b
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	710					ENSPNAG00000010403	ENSPNAG00000010383	ENSPNAG00000001394	ENSPNAG00000010341	ENSPNAG00000010324	or95a1 (ENSPNAG00000010316)	P4HA3 (ENSPNAG00000010295)	ENSPNAG00000010256	ENSPNAG00000010222	ENSPNAG00000010185	camkk1b (ENSPNAG00000010160)	HSPB1 (ENSPNAG00000010138) #22	YWHAG (ENSPNAG00000010059) #23	ENSPNAG00000010050	ca4b (ENSPNAG00000010021)
Red-bellied piranha	MODERN SPECIES	240	trpv1 (ENSPNAG00000010008)	fam222ba (ENSPNAG00000009974)	eral1 (ENSPNAG00000009960)	ENSPNAG00000009914	flot2a (ENSPNAG00000001344)	ENSPNAG00000009819	dhrs11a (ENSPNAG00000009804)	ggnbp2 (ENSPNAG00000009772)	pigw (ENSPNAG00000009728)	MYO19 (ENSPNAG00000009723)	znhit3 (ENSPNAG00000009703)	c1qbp (ENSPNAG00000009689)	rpain (ENSPNAG00000009665)	ENSPNAG00000009635	SRRM3 (ENSPNAG00000009621) #20	hspb1 (ENSPNAG00000004945) #22	ENSPNAG00000009606	ywhag1 (ENSPNAG00000009594) #23	ENSPNAG00000009574	ENSPNAG00000009526	supt4h1 (ENSPNAG00000009422)	ENSPNAG00000009399
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES		ENSAMXG00000042998	ENSAMXG00000003819	chordc1a (ENSAMXG00000003831)	naalad2 (ENSAMXG00000003867)	ENSAMXG00000032603	ENSAMXG00000031792	NOX4 (ENSAMXG00000003897)	tyr (ENSAMXG00000041832)	grm5b (ENSAMXG00000003924)	ctsc (ENSAMXG00000032374)	RAB38 (ENSAMXG00000036330)	ENSAMXG00000029971	ENSAMXG00000003939	camkk1b (ENSAMXG00000003954)	ENSAMXG00000038009	HSPB1 (ENSAMXG00000035295) #22	YWHAG (ENSAMXG00000034020) #23	ca4b (ENSAMXG00000003989)	DHRS11 (ENSAMXG00000037800)	DHRS11 (ENSAMXG00000003995)	DHRS11 (ENSAMXG00000041118)	ENSAMXG00000003998	zgc:174895 (ENSAMXG00000004003)	rab34a (ENSAMXG00000043003)	TLCD1 (ENSAMXG00000041564)	nek8 (ENSAMXG00000004017)	traf4a (ENSAMXG00000033861)	tada2a (ENSAMXG00000004036)	dusp14 (ENSAMXG00000025808)	SYNRG (ENSAMXG00000004038)	hnf1ba (ENSAMXG00000004039)
Mexicana tetra	MODERN SPECIES	111	eral1 (ENSAMXG00000037957)	tbx16l (ENSAMXG00000033680)	flot2a (ENSAMXG00000016179)	ENSAMXG00000016157	dhrs11a (ENSAMXG00000030213)	SSR4 (ENSAMXG00000032687)	ggnbp2 (ENSAMXG00000016123)	pigw (ENSAMXG00000024844)	MYO19 (ENSAMXG00000016118)	znhit3 (ENSAMXG00000042020)	c1qbp (ENSAMXG00000016100)	rpain (ENSAMXG00000016087)	MLXIPL (ENSAMXG00000016067)	SRRM3 (ENSAMXG00000016051) #20	ENSAMXG00000031070	hspb1 (ENSAMXG00000016037) #22	ywhag1 (ENSAMXG00000035383) #23	ENSAMXG00000016010	ENSAMXG00000015980	supt4h1 (ENSAMXG00000041272)	ENSAMXG00000030920	ENSAMXG00000015935	hpda (ENSAMXG00000015913)	MTMR4 (ENSAMXG00000015899)	ENSAMXG00000024842	ca4a (ENSAMXG00000043073)	dhx33 (ENSAMXG00000015875)	nupr1a (ENSAMXG00000024841)	vkorc1l1 (ENSAMXG00000015856)	GUSB (ENSAMXG00000042392)	rplp0 (ENSAMXG00000032613)