Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000156483	ENSGT00940000156557 #7	ENSGT00940000160715 #8	ENSGT00390000003560 #9	ENSGT00390000004028 #10	ENSGT00940000155913 #12	ENSGT00390000007183 #13	ENSGT00940000154531 #14	ENSGT00940000160610 #15	ENSGT01090000260082.d.b #16	ENSGT00390000004172 #17	ENSGT00940000157993 #18	ENSGT00530000063558.B	ENSGT00390000011877 #20	ENSGT00390000013931.a.b.b #21	ENSGT01030000234626.B #22	ENSGT00550000074878 #23	ENSGT00390000006394 #24	ENSGT00940000153167.A.a #25	ENSGT01030000234639.A.a #26	ENSGT00390000013943 #28	ENSGT00940000162065 #29	ENSGT00940000155089 #30	ENSGT00940000160810 #31	ENSGT00940000155208 #32	ENSGT00880000138034 #33	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #34	ENSGT00390000011034 #36	ENSGT00940000157330 #37	ENSGT00940000155310.b
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000156483	ENSGT00940000156557 #7	ENSGT00940000160715 #8	ENSGT00390000003560 #9	ENSGT00390000004028 #10	ENSGT00940000155913 #12	ENSGT00390000007183 #13	ENSGT00940000154531.`b #14	ENSGT00940000160610 #15	ENSGT01090000260082.d.b #16	ENSGT00390000004172 #17	ENSGT00940000157993 #18	ENSGT00530000063558.B	ENSGT00390000011877 #20	ENSGT00390000013931.a.b.b #21	ENSGT01030000234626.B #22	ENSGT00550000074878 #23	ENSGT00390000006394 #24	ENSGT00940000153167.A.a #25	ENSGT01030000234639.A.a #26	ENSGT00390000013943 #28	ENSGT00940000162065 #29	ENSGT00940000155089 #30	ENSGT00940000160810 #31	ENSGT00940000155208 #32	ENSGT00880000138034 #33	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #34	ENSGT00390000015545.v #35	ENSGT00390000011034 #36	ENSGT00940000157330 #37
Alpin marmot	MODERN SPECIES	55	SNX9 (ENSMMMG00000012106) #7	SYNJ2 (ENSMMMG00000010186) #8	SERAC1 (ENSMMMG00000010093) #9	GTF2H5 (ENSMMMG00000010071) #10	ENSMMMG00000010057 #11	TULP4 (ENSMMMG00000010029) #12	TMEM181 (ENSMMMG00000009973) #13	ENSMMMG00000009958 #14	SYTL3 (ENSMMMG00000009912) #15	EZR (ENSMMMG00000009906) #16	RSPH3 (ENSMMMG00000009878) #17	TAGAP (ENSMMMG00000009875) #18	ENSMMMG00000009777 #19	SOD2 (ENSMMMG00000009744) #20	WTAP (ENSMMMG00000009724) #21	ACAT2 (ENSMMMG00000009712) #22	TCP1 (ENSMMMG00000009649) #23	MRPL18 (ENSMMMG00000009635) #24	PNLDC1 (ENSMMMG00000009617) #25	ENSMMMG00000009610 #26	MAS1 (ENSMMMG00000009593) #27	IGF2R (ENSMMMG00000009520) #28	SLC22A1 (ENSMMMG00000009498) #29	SLC22A2 (ENSMMMG00000009474) #30	SLC22A3 (ENSMMMG00000009457) #31	ENSMMMG00000009428 #32	MAP3K4 (ENSMMMG00000009318) #33	AGPAT4 (ENSMMMG00000009306) #34	ENSMMMG00000009285 #35	PRKN (ENSMMMG00000009240) #36	PACRG (ENSMMMG00000009213) #37
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00940000156483	ENSGT00940000156557 #7	ENSGT00940000160715 #8	ENSGT00390000003560 #9	ENSGT00390000004028 #10	ENSGT00940000155913 #12	ENSGT00390000007183 #13	ENSGT00940000154531.`b #14	ENSGT00940000160610 #15	ENSGT01090000260082.d.b #16	ENSGT00390000004172 #17	ENSGT00940000157993 #18	ENSGT00530000063558.B	ENSGT00390000011877 #20	ENSGT00390000013931.a.b.b #21	ENSGT01030000234626.B #22	ENSGT00550000074878 #23	ENSGT00390000006394 #24	ENSGT00940000153167.A.a #25	ENSGT01030000234639.A.a #26	ENSGT00390000013943 #28	ENSGT00940000162065 #29	ENSGT00940000155089 #30	ENSGT00940000160810 #31	ENSGT00940000155208 #32	ENSGT00880000138034 #33	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #34	ENSGT00390000015545.v #35	ENSGT00390000011034 #36	ENSGT00940000157330 #37
Squirrel	MODERN SPECIES	89	SNX9 (ENSSTOG00000010620) #7	SYNJ2 (ENSSTOG00000016474) #8	SERAC1 (ENSSTOG00000016478) #9	GTF2H5 (ENSSTOG00000003476) #10	TULP4 (ENSSTOG00000006169) #12	TMEM181 (ENSSTOG00000006218) #13	ENSSTOG00000006273 #14	SYTL3 (ENSSTOG00000006284) #15	EZR (ENSSTOG00000006325) #16	RSPH3 (ENSSTOG00000021240) #17	TAGAP (ENSSTOG00000021563) #18	FNDC1 (ENSSTOG00000007105)	ENSSTOG00000033536	SOD2 (ENSSTOG00000008738) #20	WTAP (ENSSTOG00000026157) #21	ACAT2 (ENSSTOG00000005564) #22	ENSSTOG00000005572 #23	MRPL18 (ENSSTOG00000005583) #24	PNLDC1 (ENSSTOG00000005595) #25	ENSSTOG00000026373 #26	MAS1 (ENSSTOG00000029761) #26	IGF2R (ENSSTOG00000008960) #28	SLC22A1 (ENSSTOG00000009024) #29	SLC22A2 (ENSSTOG00000010147) #30	SLC22A3 (ENSSTOG00000007036) #31	ENSSTOG00000020315 #32	MAP3K4 (ENSSTOG00000002821) #33	AGPAT4 (ENSSTOG00000002544) #34	PRKN (ENSSTOG00000021965) #36	ENSSTOG00000034364 #35	PACRG (ENSSTOG00000010375) #37
Eurasian red squirrel	MODERN SPECIES	16	SERAC1 (ENSSVLG00005017957) #9	ENSSVLG00005017883	GTF2H5 (ENSSVLG00005017847) #10	TULP4 (ENSSVLG00005017496) #12	TMEM181 (ENSSVLG00005017253) #13	DYNLT1 (ENSSVLG00005017209) #14	ENSSVLG00005017151	SYTL3 (ENSSVLG00005016826) #15	EZR (ENSSVLG00005016672) #16	RSPH3 (ENSSVLG00005016457) #17	TAGAP (ENSSVLG00005016286) #18	FNDC1 (ENSSVLG00005015913)	ENSSVLG00005015820	ENSSVLG00005015666 #20	ENSSVLG00005015534 #21	ACAT2 (ENSSVLG00005015487) #22	ENSSVLG00005015119 #23	ENSSVLG00005015024	MRPL18 (ENSSVLG00005014946) #24	ENSSVLG00005014568 #25	MAS1 (ENSSVLG00005014545) #26	ENSSVLG00005014490	IGF2R (ENSSVLG00005013999) #28	SLC22A1 (ENSSVLG00005013724) #29	SLC22A2 (ENSSVLG00005013453) #30	SLC22A3 (ENSSVLG00005013302) #31	ENSSVLG00005013240 #32	ENSSVLG00005013165 #32	ENSSVLG00005013042 #32	MAP3K4 (ENSSVLG00005011972) #33	AGPAT4 (ENSSVLG00005011803) #34