Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 155 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 Euteleostomi ANCESTRAL SPECIES 11 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Sarcopterygii ANCESTRAL SPECIES 16 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000164536 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Amniota ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Mammalia ANCESTRAL SPECIES 2 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Theria ANCESTRAL SPECIES 4 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Eutheria ANCESTRAL SPECIES 9 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Primates ANCESTRAL SPECIES 5 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Haplorrhini ANCESTRAL SPECIES 2 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.z #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Simiiformes ANCESTRAL SPECIES 5 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155828.o.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155828.o.a ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155828.o.a ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000155625 #8 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00550000074968.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000015164.l ENSGT00390000001376.ab.b.a.a.b ENSGT01090000260082.d.b #34 Macaca ANCESTRAL SPECIES 9 ENSGT00940000155625 #8 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00550000074968.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000015164.l ENSGT00390000001376.ab.b.a.a.b.a ENSGT01090000260082.d.b #34 Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01100000263493.a.b.a.b.a.b.a.b.b.b.b #14 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000015164.l ENSGT00390000001376.ab.b.a.a.b.a ENSGT01090000260082.d.b #34 Rhesus MODERN SPECIES 14 TSTD3 (ENSMMUG00000054128) #7 CCNC (ENSMMUG00000004061) #8 PRDM13 (ENSMMUG00000048121) #9 MCHR2 (ENSMMUG00000000808) #10 SIM1 (ENSMMUG00000022285) #11 ENSMMUG00000062661 #12 ASCC3 (ENSMMUG00000022287) #13 ENSMMUG00000049806 #14 GRIK2 (ENSMMUG00000009856) #15 ENSMMUG00000055978 #16 HACE1 (ENSMMUG00000014703) #17 LIN28B (ENSMMUG00000064609) #18 BVES (ENSMMUG00000014471) #19 POPDC3 (ENSMMUG00000014473) #20 PREP (ENSMMUG00000013483) #21 PRDM1 (ENSMMUG00000021401) #22 ATG5 (ENSMMUG00000019679) #23 CRYBG1 (ENSMMUG00000008120) #24 RTN4IP1 (ENSMMUG00000008121) #25 QRSL1 (ENSMMUG00000008330) #26 ENSMMUG00000056792 #27 MTRES1 (ENSMMUG00000050334) #28 BEND3 (ENSMMUG00000052231) #29 PDSS2 (ENSMMUG00000002271) #30 SOBP (ENSMMUG00000022950) #31 SCML4 (ENSMMUG00000014936) #32 SEC63 (ENSMMUG00000016598) #33 EZR (ENSMMUG00000019457) #34 SYTL3 (ENSMMUG00000058074) #35 DYNLT1 (ENSMMUG00000019454) #36 TMEM181 (ENSMMUG00000019450) #37 Crab-eating macaque MODERN SPECIES 14 ENSMFAG00000049964 MCHR2 (ENSMFAG00000040175) #10 SIM1 (ENSMFAG00000002878) #11 ENSMFAG00000061583 ASCC3 (ENSMFAG00000002081) #13 ENSMFAG00000062609 #14 GRIK2 (ENSMFAG00000040349) #15 ENSMFAG00000000351 ENSMFAG00000064569 ENSMFAG00000052218 HACE1 (ENSMFAG00000039999) #17 LIN28B (ENSMFAG00000065717) #18 BVES (ENSMFAG00000045432) #19 POPDC3 (ENSMFAG00000040532) #20 PREP (ENSMFAG00000038505) #21 PRDM1 (ENSMFAG00000037637) #22 ATG5 (ENSMFAG00000041362) #23 ENSMFAG00000051465 CRYBG1 (ENSMFAG00000038353) #24 RTN4IP1 (ENSMFAG00000045409) #25 ENSMFAG00000037584 ENSMFAG00000064133 ##27 ENSMFAG00000034144 #28 BEND3 (ENSMFAG00000043850) #29 PDSS2 (ENSMFAG00000031137) #30 SOBP (ENSMFAG00000031853) #31 SCML4 (ENSMFAG00000000713) #32 ENSMFAG00000047785 SEC63 (ENSMFAG00000034177) #33 ENSMFAG00000041251 ENSMFAG00000034442 Pig-tailed macaque MODERN SPECIES 553 GRIK2 (ENSMNEG00000030199) #15 HACE1 (ENSMNEG00000030441) #17 LIN28B (ENSMNEG00000038148) #18 BVES (ENSMNEG00000033730) #19 POPDC3 (ENSMNEG00000014319) #20 PREP (ENSMNEG00000043839) #21 ENSMNEG00000045422 PRDM1 (ENSMNEG00000032369) #22 ATG5 (ENSMNEG00000032866) #23 CRYBG1 (ENSMNEG00000033538) #24 RTN4IP1 (ENSMNEG00000045014) #25 QRSL1 (ENSMNEG00000039617) #26 ENSMNEG00000039721 ENSMNEG00000043762 ENSMNEG00000034018 #27 ENSMNEG00000028746 #28 BEND3 (ENSMNEG00000036299) #29 PDSS2 (ENSMNEG00000027986) #30 SOBP (ENSMNEG00000037530) #31 SCML4 (ENSMNEG00000036341) #32 SEC63 (ENSMNEG00000037461) #33 ENSMNEG00000035124 ENSMNEG00000028772 Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00940000155625 #8 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00550000074968.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000015164.l ENSGT00390000001376.ab.b.a.a.b ENSGT01090000260082.d.b #34 ENSGT00940000160610 #35 Olive baboon MODERN SPECIES 16 ENSPANG00000042982 SIM1 (ENSPANG00000011218) #11 ASCC3 (ENSPANG00000006307) #13 GRIK2 (ENSPANG00000006097) #15 ENSPANG00000032897 ENSPANG00000050251 ENSPANG00000029476 HACE1 (ENSPANG00000000648) #17 LIN28B (ENSPANG00000032324) #18 ENSPANG00000037832 ##16 BVES (ENSPANG00000008149) #19 POPDC3 (ENSPANG00000010757) #20 PREP (ENSPANG00000015134) #21 ENSPANG00000046918 ATG5 (ENSPANG00000025450) #23 PRDM1 (ENSPANG00000050119) #22 CRYBG1 (ENSPANG00000021647) #24 RTN4IP1 (ENSPANG00000008266) #25 QRSL1 (ENSPANG00000016880) #26 ENSPANG00000044349 ENSPANG00000041919 ENSPANG00000049765 #14 ENSPANG00000040240 ##27 ENSPANG00000037991 MTRES1 (ENSPANG00000025271) #28 BEND3 (ENSPANG00000024031) #29 PDSS2 (ENSPANG00000017550) #30 SOBP (ENSPANG00000021646) #31 SCML4 (ENSPANG00000017725) #32 SEC63 (ENSPANG00000004976) #33 ENSPANG00000043729 Cercopithecinae_d ANCESTRAL SPECIES 35 ENSGT00940000155625 #8 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00910000147706 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00550000074968.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00940000167536 ENSGT00390000009366.c.a.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000015164.l ENSGT00390000001376.ab.b.a.a.b Sooty mangabey MODERN SPECIES 139 ENSCATG00000041886 PRDM13 (ENSCATG00000041563) #9 MCHR2 (ENSCATG00000041382) #10 SIM1 (ENSCATG00000003305) #11 ENSCATG00000045106 ASCC3 (ENSCATG00000011281) #13 ENSCATG00000012149 GRIK2 (ENSCATG00000030553) #15 ENSCATG00000031343 HACE1 (ENSCATG00000011353) #17 LIN28B (ENSCATG00000037900) #18 BVES (ENSCATG00000037642) #19 POPDC3 (ENSCATG00000018981) #20 PREP (ENSCATG00000029835) #21 ENSCATG00000003731 PRDM1 (ENSCATG00000029610) #22 ATG5 (ENSCATG00000032926) #23 CRYBG1 (ENSCATG00000030957) #24 RTN4IP1 (ENSCATG00000045221) #25 QRSL1 (ENSCATG00000041686) #26 ENSCATG00000041315 ENSCATG00000031493 ENSCATG00000030902 ENSCATG00000000450 #28 BEND3 (ENSCATG00000044885) #29 PDSS2 (ENSCATG00000045083) #30 SOBP (ENSCATG00000045250) #31 SCML4 (ENSCATG00000031314) #32 SEC63 (ENSCATG00000041502) #33 ENSCATG00000020673 EZR (ENSCATG00000030432) #34 Drill MODERN SPECIES 1193 HACE1 (ENSMLEG00000030954) #17 LIN28B (ENSMLEG00000028886) #18 BVES (ENSMLEG00000028450) #19 POPDC3 (ENSMLEG00000027978) #20 PREP (ENSMLEG00000027120) #21 ENSMLEG00000034791 PRDM1 (ENSMLEG00000034606) #22 ATG5 (ENSMLEG00000034426) #23 ENSMLEG00000030488 CRYBG1 (ENSMLEG00000028621) #24 Vervet Monkey MODERN SPECIES 4 USP45 (ENSCSAG00000014609) CCNC (ENSCSAG00000014617) #8 PRDM13 (ENSCSAG00000014622) #9 MCHR2 (ENSCSAG00000014637) #10 SIM1 (ENSCSAG00000014652) #11 ASCC3 (ENSCSAG00000014674) #13 GRIK2 (ENSCSAG00000014687) #15 ENSCSAG00000018977 ENSCSAG00000018976 ENSCSAG00000014695 HACE1 (ENSCSAG00000014704) #17 LIN28B (ENSCSAG00000014708) #18 BVES (ENSCSAG00000014711) #19 POPDC3 (ENSCSAG00000014725) #20 PREP (ENSCSAG00000014741) #21 PRDM1 (ENSCSAG00000014744) #22 ATG5 (ENSCSAG00000014751) #23 ENSCSAG00000014764 CRYBG1 (ENSCSAG00000014817) #24 RTN4IP1 (ENSCSAG00000014845) #25 QRSL1 (ENSCSAG00000014852) #26 MTRES1 (ENSCSAG00000014865) #28 BEND3 (ENSCSAG00000014875) #29 PDSS2 (ENSCSAG00000014881) #30 ENSCSAG00000014888 SOBP (ENSCSAG00000014908) #31 SCML4 (ENSCSAG00000014941) #32 SEC63 (ENSCSAG00000015043) #33 OSTM1 (ENSCSAG00000015115) NR2E1 (ENSCSAG00000015143) SNX3 (ENSCSAG00000015156) Rhinopithecus ANCESTRAL SPECIES 410 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 Black snub-nosed monkey MODERN SPECIES 603 HACE1 (ENSRBIG00000034229) #17 LIN28B (ENSRBIG00000036241) #18 BVES (ENSRBIG00000033098) #19 POPDC3 (ENSRBIG00000038611) #20 PREP (ENSRBIG00000029077) #21 ATG5 (ENSRBIG00000012052) #23 PRDM1 (ENSRBIG00000028814) #22 CRYBG1 (ENSRBIG00000038062) #24 RTN4IP1 (ENSRBIG00000039752) #25 QRSL1 (ENSRBIG00000032483) #26 MTRES1 (ENSRBIG00000039230) #28 BEND3 (ENSRBIG00000039549) #29 Golden snub-nosed monkey MODERN SPECIES 2751 ENSRROG00000041936 HACE1 (ENSRROG00000042251) #17 LIN28B (ENSRROG00000033602) #18 BVES (ENSRROG00000039288) #19 POPDC3 (ENSRROG00000007778) #20 PREP (ENSRROG00000040583) #21 PRDM1 (ENSRROG00000033032) #22 ATG5 (ENSRROG00000042638) #23 CRYBG1 (ENSRROG00000040025) #24 RTN4IP1 (ENSRROG00000035214) #25 QRSL1 (ENSRROG00000032313) #26 ENSRROG00000029389 #27 ENSRROG00000042509 MTRES1 (ENSRROG00000040129) #28 Hominoidea ANCESTRAL SPECIES 4 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.a #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.b ##27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Hominidae ANCESTRAL SPECIES 5 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.a #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.b ##27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.a #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.b ##27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.a #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.b ##27 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Pan ANCESTRAL SPECIES 5 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000154552.b.g.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.a #25 ENSGT00550000074866.i #26 ENSGT00940000167536 ENSGT00390000009366.c.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Bonobo MODERN SPECIES 19 PNISR (ENSPPAG00000027087) ENSPPAG00000029781 USP45 (ENSPPAG00000034506) TSTD3 (ENSPPAG00000032827) #7 CCNC (ENSPPAG00000028772) #8 PRDM13 (ENSPPAG00000041894) #9 MCHR2 (ENSPPAG00000029322) #10 SIM1 (ENSPPAG00000009797) #11 ASCC3 (ENSPPAG00000030772) #13 GRIK2 (ENSPPAG00000037072) #15 HACE1 (ENSPPAG00000043105) #17 LIN28B (ENSPPAG00000038725) #18 BVES (ENSPPAG00000036836) #19 POPDC3 (ENSPPAG00000031101) #20 PREP (ENSPPAG00000014953) #21 PRDM1 (ENSPPAG00000025287) #22 ATG5 (ENSPPAG00000040499) #23 CRYBG1 (ENSPPAG00000030684) #24 RTN4IP1 (ENSPPAG00000031639) #25 QRSL1 (ENSPPAG00000030790) #26 ENSPPAG00000028244 MTRES1 (ENSPPAG00000032445) #28 BEND3 (ENSPPAG00000039227) #29 PDSS2 (ENSPPAG00000035956) #30 SOBP (ENSPPAG00000037988) #31 SCML4 (ENSPPAG00000020145) #32 SEC63 (ENSPPAG00000011744) #33 ENSPPAG00000033502 OSTM1 (ENSPPAG00000043416) NR2E1 (ENSPPAG00000038954) SNX3 (ENSPPAG00000032382) Chimpanzee MODERN SPECIES 19 USP45 (ENSPTRG00000018443) TSTD3 (ENSPTRG00000052330) #7 CCNC (ENSPTRG00000018444) #8 PRDM13 (ENSPTRG00000018445) #9 MCHR2 (ENSPTRG00000018446) #10 SIM1 (ENSPTRG00000018447) #11 ASCC3 (ENSPTRG00000018448) #13 ENSPTRG00000047929 GRIK2 (ENSPTRG00000018449) #15 HACE1 (ENSPTRG00000018451) #17 LIN28B (ENSPTRG00000018453) #18 BVES (ENSPTRG00000018454) #19 POPDC3 (ENSPTRG00000018455) #20 PREP (ENSPTRG00000018456) #21 ATG5 (ENSPTRG00000018458) #23 PRDM1 (ENSPTRG00000018457) #22 CRYBG1 (ENSPTRG00000018459) #24 RTN4IP1 (ENSPTRG00000018461) #25 QRSL1 (ENSPTRG00000018462) #26 ENSPTRG00000042685 MTRES1 (ENSPTRG00000018464) #28 BEND3 (ENSPTRG00000018465) #29 PDSS2 (ENSPTRG00000018466) #30 SOBP (ENSPTRG00000018467) #31 SCML4 (ENSPTRG00000018469) #32 SEC63 (ENSPTRG00000018470) #33 ENSPTRG00000049504 OSTM1 (ENSPTRG00000018471) NR2E1 (ENSPTRG00000018472) SNX3 (ENSPTRG00000018473) AFG1L (ENSPTRG00000018474) Human MODERN SPECIES 18 COQ3 (ENSG00000132423) PNISR (ENSG00000132424) USP45 (ENSG00000123552) TSTD3 (ENSG00000279170) #7 CCNC (ENSG00000112237) #8 PRDM13 (ENSG00000112238) #9 MCHR2 (ENSG00000152034) #10 SIM1 (ENSG00000112246) #11 ASCC3 (ENSG00000112249) #13 GRIK2 (ENSG00000164418) #15 HACE1 (ENSG00000085382) #17 LIN28B (ENSG00000187772) #18 BVES (ENSG00000112276) #19 POPDC3 (ENSG00000132429) #20 PREP (ENSG00000085377) #21 PRDM1 (ENSG00000057657) #22 ATG5 (ENSG00000057663) #23 CRYBG1 (ENSG00000112297) #24 RTN4IP1 (ENSG00000130347) #25 QRSL1 (ENSG00000130348) #26 CD24 (ENSG00000272398) ##27 MTRES1 (ENSG00000130349) #28 BEND3 (ENSG00000178409) #29 PDSS2 (ENSG00000164494) #30 SOBP (ENSG00000112320) #31 SCML4 (ENSG00000146285) #32 SEC63 (ENSG00000025796) #33 OSTM1 (ENSG00000081087) NR2E1 (ENSG00000112333) SNX3 (ENSG00000112335) AFG1L (ENSG00000135537) Gorilla MODERN SPECIES 19 USP45 (ENSGGOG00000000091) ENSGGOG00000022586 #7 CCNC (ENSGGOG00000007422) #8 PRDM13 (ENSGGOG00000006947) #9 MCHR2 (ENSGGOG00000017182) #10 SIM1 (ENSGGOG00000017108) #11 ASCC3 (ENSGGOG00000002790) #13 GRIK2 (ENSGGOG00000000114) #15 ENSGGOG00000043856 HACE1 (ENSGGOG00000008591) #17 LIN28B (ENSGGOG00000015437) #18 BVES (ENSGGOG00000026505) #19 POPDC3 (ENSGGOG00000017179) #20 PREP (ENSGGOG00000017196) #21 ATG5 (ENSGGOG00000016633) #23 PRDM1 (ENSGGOG00000001929) #22 CRYBG1 (ENSGGOG00000016733) #24 RTN4IP1 (ENSGGOG00000008254) #25 QRSL1 (ENSGGOG00000008261) #26 MTRES1 (ENSGGOG00000006113) #28 BEND3 (ENSGGOG00000005456) #29 PDSS2 (ENSGGOG00000040827) #30 SOBP (ENSGGOG00000015284) #31 SCML4 (ENSGGOG00000006782) #32 SEC63 (ENSGGOG00000002560) #33 ENSGGOG00000026319 OSTM1 (ENSGGOG00000009031) ENSGGOG00000041051 NR2E1 (ENSGGOG00000038410) SNX3 (ENSGGOG00000043438) AFG1L (ENSGGOG00000004244) Orangutan MODERN SPECIES 19 PNISR (ENSPPYG00000025884) USP45 (ENSPPYG00000016864) ENSPPYG00000040827 #7 CCNC (ENSPPYG00000016865) #8 PRDM13 (ENSPPYG00000016866) #9 MCHR2 (ENSPPYG00000016867) #10 SIM1 (ENSPPYG00000016868) #11 ASCC3 (ENSPPYG00000016869) #13 GRIK2 (ENSPPYG00000016870) #15 HACE1 (ENSPPYG00000016873) #17 LIN28B (ENSPPYG00000031457) #18 BVES (ENSPPYG00000016876) #19 POPDC3 (ENSPPYG00000016878) #20 PREP (ENSPPYG00000029726) #21 ATG5 (ENSPPYG00000016880) #23 PRDM1 (ENSPPYG00000016879) #22 CRYBG1 (ENSPPYG00000016881) #24 RTN4IP1 (ENSPPYG00000016882) #25 QRSL1 (ENSPPYG00000016883) #26 ENSPPYG00000016334 CD24 (ENSPPYG00000016884) ##27 MTRES1 (ENSPPYG00000016885) #28 BEND3 (ENSPPYG00000016886) #29 PDSS2 (ENSPPYG00000016887) #30 SOBP (ENSPPYG00000016889) #31 SCML4 (ENSPPYG00000016890) #32 SEC63 (ENSPPYG00000016891) #33 ENSPPYG00000031910 OSTM1 (ENSPPYG00000016892) NR2E1 (ENSPPYG00000016893) SNX3 (ENSPPYG00000016894) Gibbon MODERN SPECIES 18 USP45 (ENSNLEG00000013744) ENSNLEG00000027493 #7 CCNC (ENSNLEG00000013796) #8 PRDM13 (ENSNLEG00000013845) #9 MCHR2 (ENSNLEG00000013852) #10 SIM1 (ENSNLEG00000013870) #11 ASCC3 (ENSNLEG00000013890) #13 ENSNLEG00000013981 GRIK2 (ENSNLEG00000013983) #15 HACE1 (ENSNLEG00000014061) #17 LIN28B (ENSNLEG00000014146) #18 BVES (ENSNLEG00000014155) #19 POPDC3 (ENSNLEG00000014163) #20 PREP (ENSNLEG00000014171) #21 ATG5 (ENSNLEG00000013268) #23 PRDM1 (ENSNLEG00000013211) #22 CRYBG1 (ENSNLEG00000013318) #24 RTN4IP1 (ENSNLEG00000013349) #25 QRSL1 (ENSNLEG00000013383) #26 MTRES1 (ENSNLEG00000013450) #28 BEND3 (ENSNLEG00000013464) #29 PDSS2 (ENSNLEG00000013484) #30 SOBP (ENSNLEG00000013498) #31 ENSNLEG00000027102 SCML4 (ENSNLEG00000013516) #32 SEC63 (ENSNLEG00000013526) #33 OSTM1 (ENSNLEG00000013621) NR2E1 (ENSNLEG00000013646) SNX3 (ENSNLEG00000033323) AFG1L (ENSNLEG00000013680) ENSNLEG00000012446 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155828.o.a ENSGT00940000156143 #11 ENSGT00940000154552.b.e.b ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b.a #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.z #27 ENSGT00390000009366.d ##28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Cebidae ANCESTRAL SPECIES 5 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155828.o.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b.a #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.a.a ##27 ENSGT00390000009366.d ##28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Cebidae_a ANCESTRAL SPECIES 88 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b.a #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.i #26 ENSGT00390000018829.y.a.a ##27 ENSGT00390000009366.d ##28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00910000147202 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b.e.a Capuchin MODERN SPECIES 160 HACE1 (ENSCCAG00000028892) #17 LIN28B (ENSCCAG00000020904) #18 BVES (ENSCCAG00000027637) #19 POPDC3 (ENSCCAG00000036176) #20 PREP (ENSCCAG00000033502) #21 PRDM1 (ENSCCAG00000031062) #22 ATG5 (ENSCCAG00000022296) #23 CRYBG1 (ENSCCAG00000022546) #24 RTN4IP1 (ENSCCAG00000015806) #25 QRSL1 (ENSCCAG00000021243) #26 CD24 (ENSCCAG00000034871) ##27 BEND3 (ENSCCAG00000032949) #29 PDSS2 (ENSCCAG00000036171) #30 SOBP (ENSCCAG00000036289) #31 SCML4 (ENSCCAG00000033652) #32 SEC63 (ENSCCAG00000024413) #33 OSTM1 (ENSCCAG00000025943) NR2E1 (ENSCCAG00000034016) ENSCCAG00000022069 ENSCCAG00000033758 AFG1L (ENSCCAG00000022433) Bolivian squirrel monkey MODERN SPECIES 121 SPACA9 (ENSSBOG00000019863) AK8 (ENSSBOG00000024960) GTF3C4 (ENSSBOG00000021825) DDX31 (ENSSBOG00000021668) BARHL1 (ENSSBOG00000028564) CFAP77 (ENSSBOG00000014688) TTF1 (ENSSBOG00000034090) SETX (ENSSBOG00000028982) ENSSBOG00000025878 NTNG2 (ENSSBOG00000030323) HACE1 (ENSSBOG00000024126) #17 LIN28B (ENSSBOG00000025323) #18 BVES (ENSSBOG00000024089) #19 POPDC3 (ENSSBOG00000025829) #20 ENSSBOG00000024567 #21 PRDM1 (ENSSBOG00000023139) #22 ATG5 (ENSSBOG00000031707) #23 CRYBG1 (ENSSBOG00000033025) #24 RTN4IP1 (ENSSBOG00000027877) #25 QRSL1 (ENSSBOG00000022441) #26 ENSSBOG00000032630 ENSSBOG00000034823 MTRES1 (ENSSBOG00000020668) ##28 ENSSBOG00000029782 #29 PDSS2 (ENSSBOG00000021644) #30 SOBP (ENSSBOG00000031278) #31 ENSSBOG00000012379 SCML4 (ENSSBOG00000023263) #32 ENSSBOG00000022627 SEC63 (ENSSBOG00000020518) #33 ENSSBOG00000035021 Marmoset MODERN SPECIES 16 ASCC3 (ENSCJAG00000001507) #13 ENSCJAG00000001550 GRIK2 (ENSCJAG00000001552) #15 ENSCJAG00000073079 ENSCJAG00000062395 HACE1 (ENSCJAG00000001597) #17 LIN28B (ENSCJAG00000001671) #18 BVES (ENSCJAG00000001683) #19 POPDC3 (ENSCJAG00000001700) #20 ENSCJAG00000071190 PREP (ENSCJAG00000001710) #21 ENSCJAG00000074740 ##14 ENSCJAG00000085831 ATG5 (ENSCJAG00000006306) #23 ENSCJAG00000079207 PRDM1 (ENSCJAG00000006332) #22 ENSCJAG00000074624 CRYBG1 (ENSCJAG00000006246) #24 ENSCJAG00000079990 RTN4IP1 (ENSCJAG00000006218) #25 QRSL1 (ENSCJAG00000006200) #26 ENSCJAG00000058620 ##27 ENSCJAG00000073856 ##12 MTRES1 (ENSCJAG00000046921) ##28 BEND3 (ENSCJAG00000039628) #29 ENSCJAG00000080202 PDSS2 (ENSCJAG00000006153) #30 ENSCJAG00000076519 ##12 ENSCJAG00000084385 ##16 SOBP (ENSCJAG00000006119) #31 SCML4 (ENSCJAG00000006102) #32 Mas night monkey MODERN SPECIES 478 ENSANAG00000032603 SIM1 (ENSANAG00000028397) #11 ENSANAG00000036846 ASCC3 (ENSANAG00000021476) #13 GRIK2 (ENSANAG00000000802) #15 ENSANAG00000019962 HACE1 (ENSANAG00000037835) #17 ENSANAG00000036677 #18 BVES (ENSANAG00000015115) #19 POPDC3 (ENSANAG00000026735) #20 ENSANAG00000015673 #21 ENSANAG00000024327 PRDM1 (ENSANAG00000030675) #22 ATG5 (ENSANAG00000022796) #23 ENSANAG00000027713 CRYBG1 (ENSANAG00000023839) #24 RTN4IP1 (ENSANAG00000037479) #25 ENSANAG00000003965 #26 ENSANAG00000037838 #27 ENSANAG00000036990 ENSANAG00000037315 ##28 BEND3 (ENSANAG00000021126) #29 PDSS2 (ENSANAG00000015555) #30 SOBP (ENSANAG00000034007) #31 ENSANAG00000025986 SCML4 (ENSANAG00000021645) #32 SEC63 (ENSANAG00000022108) #33 ENSANAG00000019987 Tarsier MODERN SPECIES 5998 ENSTSYG00000031008 ENSTSYG00000032792 MANEA (ENSTSYG00000037154) HACE1 (ENSTSYG00000014445) #17 LIN28B (ENSTSYG00000006480) #18 BVES (ENSTSYG00000006928) #19 POPDC3 (ENSTSYG00000005861) #20 PREP (ENSTSYG00000006008) #21 ATG5 (ENSTSYG00000007153) #23 PRDM1 (ENSTSYG00000011666) #22 ENSTSYG00000030548 CRYBG1 (ENSTSYG00000013530) #24 RTN4IP1 (ENSTSYG00000013560) #25 QRSL1 (ENSTSYG00000013570) #26 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Lemuriformes ANCESTRAL SPECIES 3 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.ab #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b.b Lemuriformes_a ANCESTRAL SPECIES 63 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.ab #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b.b Coquerels sifaka MODERN SPECIES 492 ENSPCOG00000020641 HACE1 (ENSPCOG00000016340) #17 LIN28B (ENSPCOG00000016875) #18 BVES (ENSPCOG00000023354) #19 POPDC3 (ENSPCOG00000022458) #20 PREP (ENSPCOG00000018527) #21 ATG5 (ENSPCOG00000015617) #23 PRDM1 (ENSPCOG00000002322) #22 CRYBG1 (ENSPCOG00000022574) #24 ENSPCOG00000025469 RTN4IP1 (ENSPCOG00000027386) #25 ENSPCOG00000019397 #26 CD24 (ENSPCOG00000014613) #27 ENSPCOG00000027220 #28 BEND3 (ENSPCOG00000017387) #29 PDSS2 (ENSPCOG00000005947) #30 SOBP (ENSPCOG00000025980) #31 SCML4 (ENSPCOG00000022920) #32 SEC63 (ENSPCOG00000021091) #33 OSTM1 (ENSPCOG00000025401) NR2E1 (ENSPCOG00000019521) SNX3 (ENSPCOG00000020531) AFG1L (ENSPCOG00000014543) Greater bamboo lemur MODERN SPECIES 187 SLC40A1 (ENSPSMG00000004638) WDR75 (ENSPSMG00000004614) COL5A2 (ENSPSMG00000004576) COL3A1 (ENSPSMG00000004515) GULP1 (ENSPSMG00000004447) ENSPSMG00000004324 DOK6 (ENSPSMG00000004300) CD226 (ENSPSMG00000004279) RTTN (ENSPSMG00000004198) SOCS6 (ENSPSMG00000003912) HACE1 (ENSPSMG00000003828) #17 LIN28B (ENSPSMG00000003723) #18 BVES (ENSPSMG00000003702) #19 POPDC3 (ENSPSMG00000003691) #20 PREP (ENSPSMG00000003663) #21 PRDM1 (ENSPSMG00000003598) #22 ATG5 (ENSPSMG00000003484) #23 ENSPSMG00000003411 CRYBG1 (ENSPSMG00000003403) #24 RTN4IP1 (ENSPSMG00000003357) #25 QRSL1 (ENSPSMG00000003285) #26 ENSPSMG00000003206 #27 MTRES1 (ENSPSMG00000003201) #28 BEND3 (ENSPSMG00000003180) #29 ENSPSMG00000003169 PDSS2 (ENSPSMG00000003161) #30 SOBP (ENSPSMG00000003137) #31 SCML4 (ENSPSMG00000003119) #32 SEC63 (ENSPSMG00000003081) #33 OSTM1 (ENSPSMG00000003042) NR2E1 (ENSPSMG00000003030) Mouse lemur MODERN SPECIES 28 ENSMICG00000038117 GPRC6A (ENSMICG00000047395) FAM162B (ENSMICG00000032976) KPNA5 (ENSMICG00000037900) ZUP1 (ENSMICG00000013671) RSPH4A (ENSMICG00000032048) ENSMICG00000044337 ENSMICG00000032724 ENSMICG00000048082 #15 ENSMICG00000046073 HACE1 (ENSMICG00000002280) #17 LIN28B (ENSMICG00000047923) #18 BVES (ENSMICG00000041560) #19 POPDC3 (ENSMICG00000045084) #20 PREP (ENSMICG00000000906) #21 PRDM1 (ENSMICG00000010329) #22 ATG5 (ENSMICG00000010334) #23 CRYBG1 (ENSMICG00000030885) #24 RTN4IP1 (ENSMICG00000015741) #25 QRSL1 (ENSMICG00000015754) #26 ENSMICG00000029426 ENSMICG00000011517 #27 ENSMICG00000004137 #28 BEND3 (ENSMICG00000043137) #29 PDSS2 (ENSMICG00000032777) #30 SOBP (ENSMICG00000030144) #31 SCML4 (ENSMICG00000004168) #32 SEC63 (ENSMICG00000014221) #33 OSTM1 (ENSMICG00000027511) NR2E1 (ENSMICG00000014274) SNX3 (ENSMICG00000043331) Bushbaby MODERN SPECIES 117 HACE1 (ENSOGAG00000011034) #17 LIN28B (ENSOGAG00000011042) #18 ENSOGAG00000029797 BVES (ENSOGAG00000011044) #19 POPDC3 (ENSOGAG00000011048) #20 PREP (ENSOGAG00000015233) #21 PRDM1 (ENSOGAG00000014036) #22 ATG5 (ENSOGAG00000004787) #23 ENSOGAG00000032847 #24 ENSOGAG00000012697 #24 RTN4IP1 (ENSOGAG00000012703) #25 QRSL1 (ENSOGAG00000012707) #26 ENSOGAG00000024102 MTRES1 (ENSOGAG00000008839) #28 BEND3 (ENSOGAG00000027957) #29 PDSS2 (ENSOGAG00000006339) #30 SOBP (ENSOGAG00000006342) #31 SCML4 (ENSOGAG00000006345) #32 SEC63 (ENSOGAG00000015346) #33 OSTM1 (ENSOGAG00000015357) NR2E1 (ENSOGAG00000011992) SNX3 (ENSOGAG00000012282) Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Glires ANCESTRAL SPECIES 5 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Rodentia ANCESTRAL SPECIES 6 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Rodentia_B ANCESTRAL SPECIES 18 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Myomorpha ANCESTRAL SPECIES 21 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Muroidea ANCESTRAL SPECIES 22 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Cricetidae ANCESTRAL SPECIES 11 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Cricetidae_B ANCESTRAL SPECIES 21 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Northern American deer mouse MODERN SPECIES 7 Sim1 (ENSPEMG00000029968) #11 Ascc3 (ENSPEMG00000015319) #13 ENSPEMG00000013305 Grik2 (ENSPEMG00000016459) #15 ENSPEMG00000024704 ENSPEMG00000028199 ENSPEMG00000025768 Hace1 (ENSPEMG00000006907) #17 Lin28b (ENSPEMG00000015724) #18 Bves (ENSPEMG00000014540) #19 Popdc3 (ENSPEMG00000012534) #20 Prep (ENSPEMG00000015306) #21 Prdm1 (ENSPEMG00000023622) #22 Atg5 (ENSPEMG00000023746) #23 Crybg1 (ENSPEMG00000006428) #24 Rtn4ip1 (ENSPEMG00000009749) #25 Qrsl1 (ENSPEMG00000009855) #26 ENSPEMG00000009329 ENSPEMG00000029014 #27 Mtres1 (ENSPEMG00000019114) #28 Bend3 (ENSPEMG00000031300) #29 Pdss2 (ENSPEMG00000010336) #30 Sobp (ENSPEMG00000026852) #31 Scml4 (ENSPEMG00000017707) #32 Sec63 (ENSPEMG00000018907) #33 Ostm1 (ENSPEMG00000001749) Nr2e1 (ENSPEMG00000014789) ENSPEMG00000001898 Prairie vole MODERN SPECIES 120 ENSMOCG00000008733 Hace1 (ENSMOCG00000002477) #17 Lin28b (ENSMOCG00000015558) #18 Bves (ENSMOCG00000007493) #19 Popdc3 (ENSMOCG00000001194) #20 Prep (ENSMOCG00000018190) #21 ENSMOCG00000018272 Prdm1 (ENSMOCG00000009391) #22 Atg5 (ENSMOCG00000000288) #23 Cricetinae ANCESTRAL SPECIES 67 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Golden Hamster MODERN SPECIES 639 Dnaaf10 (ENSMAUG00000011603) Pno1 (ENSMAUG00000014995) Ppp3r1 (ENSMAUG00000014614) Cnrip1 (ENSMAUG00000019592) Plek (ENSMAUG00000011299) Fbxo48 (ENSMAUG00000020533) Egfr (ENSMAUG00000000581) Sim1 (ENSMAUG00000021356) #11 Ascc3 (ENSMAUG00000018304) #13 Grik2 (ENSMAUG00000012525) #15 Hace1 (ENSMAUG00000012759) #17 Lin28b (ENSMAUG00000006523) #18 Bves (ENSMAUG00000001250) #19 Popdc3 (ENSMAUG00000000723) #20 Prep (ENSMAUG00000009728) #21 Prdm1 (ENSMAUG00000021820) #22 Atg5 (ENSMAUG00000016272) #23 Chinese hamster chok1gshd MODERN SPECIES 1 Map7 (ENSCGRG00001024812) ENSCGRG00001024620 Mtfr2 (ENSCGRG00001024312) Pde7b (ENSCGRG00001021298) Ahi1 (ENSCGRG00001019676) Myb (ENSCGRG00001018869) Hbs1l (ENSCGRG00001024531) Aldh8a1 (ENSCGRG00001023246) 1700020N01Rik (ENSCGRG00001006553) Sgk1 (ENSCGRG00001022228) ENSCGRG00001005727 Lin28b (ENSCGRG00001024078) #18 Bves (ENSCGRG00001023624) #19 Popdc3 (ENSCGRG00001024360) #20 Prep (ENSCGRG00001023843) #21 Prdm1 (ENSCGRG00001023291) #22 Atg5 (ENSCGRG00001022743) #23 Ccdc70 (ENSCGRG00001005698) Atp7b (ENSCGRG00001019712) ENSCGRG00001023830 Nek5 (ENSCGRG00001024708) Nek3 (ENSCGRG00001004635) Ckap2 (ENSCGRG00001023062) Vps36 (ENSCGRG00001022167) Thsd1 (ENSCGRG00001021322) Tpte (ENSCGRG00001016028) ENSCGRG00001015230 ENSCGRG00001004965 Mrps31 (ENSCGRG00001014160) Smim19 (ENSCGRG00001013840) ENSCGRG00001008544 Murinae ANCESTRAL SPECIES 36 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Mus ANCESTRAL SPECIES 15 ENSGT00940000160831 ENSGT00530000063353.a.b.a ENSGT00940000154319.u.a ENSGT01050000244879.b.a.b.b ENSGT00940000158416 ENSGT00640000091497.b ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Mus_A ANCESTRAL SPECIES 11 ENSGT00940000160831 ENSGT00530000063353.a.b.a ENSGT00940000154319.u.a ENSGT01050000244879.b.a.b.b ENSGT00940000158416 ENSGT00640000091497.b ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00900000143316 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000160831 ENSGT00530000063353.a.b.a ENSGT00940000154319.u.a ENSGT01050000244879.b.a.b.b ENSGT00940000158416 ENSGT00640000091497.b ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b.g.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00900000143316 ENSGT00390000018829.o #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000160831 ENSGT00530000063353.a.b.a ENSGT00940000154319.u.a ENSGT01050000244879.b.a.b.b ENSGT00940000158416 ENSGT00640000091497.b ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b.g.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00900000143316 ENSGT00390000018829.o #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT01100000264286 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Steppe mouse MODERN SPECIES 3355 Hace1 (ENSMSIG00000030256) #17 Lin28b (ENSMSIG00000030258) #18 Bves (ENSMSIG00000030263) #19 Popdc3 (ENSMSIG00000030266) #20 ENSMSIG00000030269 #21 Prdm1 (ENSMSIG00000030278) #22 Atg5 (ENSMSIG00000030288) #23 ENSMSIG00000030292 Crybg1 (ENSMSIG00000030293) #24 Rtn4ip1 (ENSMSIG00000030296) #25 Qrsl1 (ENSMSIG00000030298) #26 ENSMSIG00000030301 ENSMSIG00000030302 #27 Mtres1 (ENSMSIG00000030303) #28 Bend3 (ENSMSIG00000030306) #29 Pdss2 (ENSMSIG00000030310) #30 ENSMSIG00000030312 Sobp (ENSMSIG00000030314) #31 Scml4 (ENSMSIG00000030317) #32 Sec63 (ENSMSIG00000030343) #33 Ostm1 (ENSMSIG00000030347) spretus MODERN SPECIES 1 Ros1 (MGP_SPRETEiJ_G0016120) Vgll2 (MGP_SPRETEiJ_G0016119) MGP_SPRETEiJ_G0016118 Rfx6 (MGP_SPRETEiJ_G0016117) Gprc6a (MGP_SPRETEiJ_G0016116) Fam162b (MGP_SPRETEiJ_G0016115) MGP_SPRETEiJ_G0016113 Sim1 (MGP_SPRETEiJ_G0016112) #11 Ascc3 (MGP_SPRETEiJ_G0016111) #13 Grik2 (MGP_SPRETEiJ_G0016110) #15 Hace1 (MGP_SPRETEiJ_G0016109) #17 Lin28b (MGP_SPRETEiJ_G0016108) #18 Bves (MGP_SPRETEiJ_G0016107) #19 Popdc3 (MGP_SPRETEiJ_G0016106) #20 Prep (MGP_SPRETEiJ_G0016105) #21 Prdm1 (MGP_SPRETEiJ_G0016104) #22 Atg5 (MGP_SPRETEiJ_G0016103) #23 Crybg1 (MGP_SPRETEiJ_G0016102) #24 Rtn4ip1 (MGP_SPRETEiJ_G0016101) #25 Qrsl1 (MGP_SPRETEiJ_G0016100) #26 MGP_SPRETEiJ_G0016099 MGP_SPRETEiJ_G0016098 #27 Mtres1 (MGP_SPRETEiJ_G0016097) #28 Bend3 (MGP_SPRETEiJ_G0016096) #29 Pdss2 (MGP_SPRETEiJ_G0016095) #30 MGP_SPRETEiJ_G0016094 Sobp (MGP_SPRETEiJ_G0016093) #31 Scml4 (MGP_SPRETEiJ_G0016092) #32 Sec63 (MGP_SPRETEiJ_G0016091) #33 Ostm1 (MGP_SPRETEiJ_G0016090) Nr2e1 (MGP_SPRETEiJ_G0016089) Mouse MODERN SPECIES 1 Vgll2 (ENSMUSG00000049641) Rfx6 (ENSMUSG00000019900) Gprc6a (ENSMUSG00000019905) Fam162b (ENSMUSG00000019909) Lilrb4a (ENSMUSG00000112148) Lilrb4b (ENSMUSG00000112023) Gm49339 (ENSMUSG00000062593) Sim1 (ENSMUSG00000019913) #11 Ascc3 (ENSMUSG00000038774) #13 Grik2 (ENSMUSG00000056073) #15 Hace1 (ENSMUSG00000038822) #17 Lin28b (ENSMUSG00000063804) #18 Bves (ENSMUSG00000071317) #19 Popdc3 (ENSMUSG00000019848) #20 Prep (ENSMUSG00000019849) #21 Prdm1 (ENSMUSG00000038151) #22 Atg5 (ENSMUSG00000038160) #23 Crybg1 (ENSMUSG00000019866) #24 Rtn4ip1 (ENSMUSG00000019864) #25 Qrsl1 (ENSMUSG00000019863) #26 Cd24a (ENSMUSG00000047139) #27 Mtres1 (ENSMUSG00000019797) #28 Pam16l (ENSMUSG00000045886) Bend3 (ENSMUSG00000038214) #29 Pdss2 (ENSMUSG00000038240) #30 Sobp (ENSMUSG00000038248) #31 Scml4 (ENSMUSG00000044770) #32 Sec63 (ENSMUSG00000019802) #33 Ostm1 (ENSMUSG00000038280) Nr2e1 (ENSMUSG00000019803) Snx3 (ENSMUSG00000019804) Ryukyu mouse MODERN SPECIES 1 Ros1 (MGP_CAROLIEiJ_G0015311) Vgll2 (MGP_CAROLIEiJ_G0015310) MGP_CAROLIEiJ_G0015309 Rfx6 (MGP_CAROLIEiJ_G0015308) Gprc6a (MGP_CAROLIEiJ_G0015307) Fam162b (MGP_CAROLIEiJ_G0015306) MGP_CAROLIEiJ_G0015304 Sim1 (MGP_CAROLIEiJ_G0015303) #11 Ascc3 (MGP_CAROLIEiJ_G0015302) #13 Grik2 (MGP_CAROLIEiJ_G0015301) #15 Hace1 (MGP_CAROLIEiJ_G0015300) #17 Lin28b (MGP_CAROLIEiJ_G0015299) #18 Bves (MGP_CAROLIEiJ_G0015298) #19 Popdc3 (MGP_CAROLIEiJ_G0015297) #20 Prep (MGP_CAROLIEiJ_G0015296) #21 Prdm1 (MGP_CAROLIEiJ_G0015295) #22 Atg5 (MGP_CAROLIEiJ_G0015294) #23 Crybg1 (MGP_CAROLIEiJ_G0015293) #24 Rtn4ip1 (MGP_CAROLIEiJ_G0015292) #25 Qrsl1 (MGP_CAROLIEiJ_G0015291) #26 MGP_CAROLIEiJ_G0015290 MGP_CAROLIEiJ_G0015289 #27 Mtres1 (MGP_CAROLIEiJ_G0015288) #28 Bend3 (MGP_CAROLIEiJ_G0015287) #29 Pdss2 (MGP_CAROLIEiJ_G0015286) #30 MGP_CAROLIEiJ_G0015285 Sobp (MGP_CAROLIEiJ_G0015284) #31 Scml4 (MGP_CAROLIEiJ_G0015283) #32 Sec63 (MGP_CAROLIEiJ_G0015282) #33 Ostm1 (MGP_CAROLIEiJ_G0015281) Nr2e1 (MGP_CAROLIEiJ_G0015280) Shrew mouse MODERN SPECIES 22 Vgll2 (MGP_PahariEiJ_G0030727) MGP_PahariEiJ_G0030726 Rfx6 (MGP_PahariEiJ_G0030725) Gprc6a (MGP_PahariEiJ_G0030724) Fam162b (MGP_PahariEiJ_G0030723) MGP_PahariEiJ_G0030722 MGP_PahariEiJ_G0030721 Sim1 (MGP_PahariEiJ_G0030720) #11 Ascc3 (MGP_PahariEiJ_G0030719) #13 Grik2 (MGP_PahariEiJ_G0030718) #15 Hace1 (MGP_PahariEiJ_G0030717) #17 Lin28b (MGP_PahariEiJ_G0030716) #18 Bves (MGP_PahariEiJ_G0030715) #19 Popdc3 (MGP_PahariEiJ_G0030714) #20 Prep (MGP_PahariEiJ_G0030713) #21 Prdm1 (MGP_PahariEiJ_G0030712) #22 Atg5 (MGP_PahariEiJ_G0030711) #23 Crybg1 (MGP_PahariEiJ_G0030710) #24 Rtn4ip1 (MGP_PahariEiJ_G0030709) #25 Qrsl1 (MGP_PahariEiJ_G0030708) #26 MGP_PahariEiJ_G0030707 Mtres1 (MGP_PahariEiJ_G0030706) #28 Bend3 (MGP_PahariEiJ_G0030705) #29 Pdss2 (MGP_PahariEiJ_G0030704) #30 MGP_PahariEiJ_G0030703 Sobp (MGP_PahariEiJ_G0030702) #31 Scml4 (MGP_PahariEiJ_G0030701) #32 Sec63 (MGP_PahariEiJ_G0030700) #33 Ostm1 (MGP_PahariEiJ_G0030699) Nr2e1 (MGP_PahariEiJ_G0030698) Snx3 (MGP_PahariEiJ_G0030697) Rat MODERN SPECIES 12 ENSRNOG00000068137 Sim1 (ENSRNOG00000037600) #11 Ascc3 (ENSRNOG00000037604) #13 Ubxn2a (ENSRNOG00000065514) Grik2 (ENSRNOG00000000368) #15 AABR07045621.1 (ENSRNOG00000049150) ENSRNOG00000063612 Hace1 (ENSRNOG00000000327) #17 Lin28b (ENSRNOG00000025938) #18 Bves (ENSRNOG00000043199) #19 Popdc3 (ENSRNOG00000047102) #20 Prep (ENSRNOG00000051061) #21 Prdm1 (ENSRNOG00000000323) #22 Atg5 (ENSRNOG00000000322) #23 AABR07045487.1 (ENSRNOG00000037628) Crybg1 (ENSRNOG00000025998) #24 Rtn4ip1 (ENSRNOG00000000279) #25 Qrsl1 (ENSRNOG00000026049) #26 Cd24 (ENSRNOG00000000321) #27 AABR07045462.1 (ENSRNOG00000000320) Mtres1 (ENSRNOG00000047118) #28 Bend3 (ENSRNOG00000046505) #29 Rpl37a-ps5 (ENSRNOG00000032964) Pdss2 (ENSRNOG00000042962) #30 LOC688390 (ENSRNOG00000026080) Sobp (ENSRNOG00000000316) #31 ENSRNOG00000069773 Scml4 (ENSRNOG00000026110) #32 Upper Galilee mountains blind mole rat MODERN SPECIES 1522 Hace1 (ENSNGAG00000017799) #17 Lin28b (ENSNGAG00000022808) #18 Bves (ENSNGAG00000024027) #19 Popdc3 (ENSNGAG00000024046) #20 Prep (ENSNGAG00000024271) #21 Prdm1 (ENSNGAG00000022787) #22 Atg5 (ENSNGAG00000017886) #23 Crybg1 (ENSNGAG00000010488) #24 Rtn4ip1 (ENSNGAG00000022333) #25 Qrsl1 (ENSNGAG00000023213) #26 ENSNGAG00000022687 #27 ENSNGAG00000022212 Mtres1 (ENSNGAG00000015067) #28 Bend3 (ENSNGAG00000021369) #29 Pdss2 (ENSNGAG00000022824) #30 Sobp (ENSNGAG00000001438) #31 Scml4 (ENSNGAG00000021906) #32 ENSNGAG00000022978 #33 Ostm1 (ENSNGAG00000024096) Nr2e1 (ENSNGAG00000021311) Snx3 (ENSNGAG00000023818) Lesser Egyptian jerboa MODERN SPECIES 78 ENSJJAG00000012978 #8 ENSJJAG00000011362 ENSJJAG00000014057 Prdm13 (ENSJJAG00000017076) #9 ENSJJAG00000018345 #10 Ascc3 (ENSJJAG00000022570) #13 ENSJJAG00000009659 Grik2 (ENSJJAG00000019973) #15 ENSJJAG00000023039 ENSJJAG00000000658 Hace1 (ENSJJAG00000013574) #17 Lin28b (ENSJJAG00000011024) #18 Bves (ENSJJAG00000012371) #19 Popdc3 (ENSJJAG00000014670) #20 Prep (ENSJJAG00000020209) #21 Prdm1 (ENSJJAG00000023075) #22 Atg5 (ENSJJAG00000015537) #23 ENSJJAG00000017114 #24 Rtn4ip1 (ENSJJAG00000016075) #25 Qrsl1 (ENSJJAG00000012030) #26 Mtres1 (ENSJJAG00000023519) #28 Bend3 (ENSJJAG00000015264) #29 Pdss2 (ENSJJAG00000018660) #30 ENSJJAG00000013046 Sobp (ENSJJAG00000013825) #31 Scml4 (ENSJJAG00000010133) #32 Sec63 (ENSJJAG00000015157) #33 ENSJJAG00000018243 Nr2e1 (ENSJJAG00000022055) Snx3 (ENSJJAG00000021440) Afg1l (ENSJJAG00000009959) Kangaroo rat MODERN SPECIES 381 ENSDORG00000023456 ENSDORG00000029441 ENSDORG00000003696 Usp45 (ENSDORG00000009273) ENSDORG00000008393 #8 Prdm13 (ENSDORG00000026728) #9 ENSDORG00000010276 #10 Sim1 (ENSDORG00000029337) #11 Ascc3 (ENSDORG00000008572) #13 Grik2 (ENSDORG00000015175) #15 Hace1 (ENSDORG00000012054) #17 ENSDORG00000009587 #18 Bves (ENSDORG00000006341) #19 Popdc3 (ENSDORG00000024694) #20 Prep (ENSDORG00000001108) #21 Prdm1 (ENSDORG00000014237) #22 ENSDORG00000024871 #23 ENSDORG00000015211 #24 Rtn4ip1 (ENSDORG00000007834) #25 Qrsl1 (ENSDORG00000007837) #26 ENSDORG00000024012 #27 Mtres1 (ENSDORG00000014894) #28 Bend3 (ENSDORG00000013215) #29 Pdss2 (ENSDORG00000001388) #30 ENSDORG00000023606 ENSDORG00000030234 #31 ENSDORG00000028096 #32 ENSDORG00000012141 #32 Sec63 (ENSDORG00000002266) #33 Ostm1 (ENSDORG00000025626) ENSDORG00000007523 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719.t ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Marmotini ANCESTRAL SPECIES 11 ENSGT00730000111138 ENSGT00940000157719.t ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00390000016836.b.d ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.u.a.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Marmotini_b ANCESTRAL SPECIES 86 ENSGT00390000016836.b.d ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.u.a.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Squirrel MODERN SPECIES 164 ENSSTOG00000025714 HACE1 (ENSSTOG00000028610) #17 LIN28B (ENSSTOG00000002692) #18 BVES (ENSSTOG00000003822) #19 POPDC3 (ENSSTOG00000003846) #20 PREP (ENSSTOG00000023845) #21 PRDM1 (ENSSTOG00000016505) #22 ATG5 (ENSSTOG00000016507) #23 CRYBG1 (ENSSTOG00000026542) #24 RTN4IP1 (ENSSTOG00000009165) #25 QRSL1 (ENSSTOG00000009177) #26 ENSSTOG00000030850 #27 MTRES1 (ENSSTOG00000015779) #28 BEND3 (ENSSTOG00000026766) #29 PDSS2 (ENSSTOG00000015790) #30 SOBP (ENSSTOG00000025137) #31 SCML4 (ENSSTOG00000004682) #32 SEC63 (ENSSTOG00000009628) #33 ENSSTOG00000012195 NR2E1 (ENSSTOG00000007248) SNX3 (ENSSTOG00000007274) AFG1L (ENSSTOG00000001115) Arctic ground squirrel MODERN SPECIES 70 ENSUPAG00010012620 HACE1 (ENSUPAG00010012542) #17 LIN28B (ENSUPAG00010012532) #18 ENSUPAG00010012519 BVES (ENSUPAG00010012511) #19 POPDC3 (ENSUPAG00010012491) #20 PREP (ENSUPAG00010012470) #21 PRDM1 (ENSUPAG00010012448) #22 ATG5 (ENSUPAG00010012440) #23 ENSUPAG00010012436 CRYBG1 (ENSUPAG00010011893) #24 RTN4IP1 (ENSUPAG00010011859) #25 QRSL1 (ENSUPAG00010011831) #26 ENSUPAG00010011822 ENSUPAG00010011806 #27 MTRES1 (ENSUPAG00010011795) #28 PDSS2 (ENSUPAG00010011770) #30 SOBP (ENSUPAG00010011741) #31 ENSUPAG00010011737 SCML4 (ENSUPAG00010011728) #32 SEC63 (ENSUPAG00010011708) #33 OSTM1 (ENSUPAG00010011701) NR2E1 (ENSUPAG00010011686) Alpin marmot MODERN SPECIES 2 ASCC3 (ENSMMMG00000011942) #13 ENSMMMG00000012017 #27 ENSMMMG00000012023 GRIK2 (ENSMMMG00000012043) #15 ENSMMMG00000012532 ENSMMMG00000012534 ENSMMMG00000012539 ENSMMMG00000012550 ENSMMMG00000012557 ENSMMMG00000012563 HACE1 (ENSMMMG00000012570) #17 ENSMMMG00000012601 BVES (ENSMMMG00000012613) #19 POPDC3 (ENSMMMG00000012617) #20 PREP (ENSMMMG00000012625) #21 PRDM1 (ENSMMMG00000012643) #22 ATG5 (ENSMMMG00000012672) #23 CRYBG1 (ENSMMMG00000012703) #24 ENSMMMG00000013691 RTN4IP1 (ENSMMMG00000013695) #25 QRSL1 (ENSMMMG00000013712) #26 ENSMMMG00000013748 #27 MTRES1 (ENSMMMG00000013762) #28 BEND3 (ENSMMMG00000013770) #29 PDSS2 (ENSMMMG00000013802) #30 SCML4 (ENSMMMG00000013821) #32 SEC63 (ENSMMMG00000013834) #33 OSTM1 (ENSMMMG00000013885) NR2E1 (ENSMMMG00000013897) ENSMMMG00000013918 AFG1L (ENSMMMG00000013948) Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005009650 ENSSVLG00005009236 #8 PRDM13 (ENSSVLG00005009125) #9 MCHR2 (ENSSVLG00005009070) #10 SIM1 (ENSSVLG00005008980) #11 ENSSVLG00005008950 ASCC3 (ENSSVLG00005008896) #13 GRIK2 (ENSSVLG00005008323) #15 ENSSVLG00005008208 HACE1 (ENSSVLG00005008141) #17 LIN28B (ENSSVLG00005008061) #18 ENSSVLG00005008028 BVES (ENSSVLG00005008016) #19 POPDC3 (ENSSVLG00005007986) #20 PREP (ENSSVLG00005007952) #21 PRDM1 (ENSSVLG00005007837) #22 ATG5 (ENSSVLG00005007670) #23 ENSSVLG00005007633 CRYBG1 (ENSSVLG00005007465) #24 RTN4IP1 (ENSSVLG00005007400) #25 QRSL1 (ENSSVLG00005007356) #26 ENSSVLG00005007327 MTRES1 (ENSSVLG00005007294) #28 BEND3 (ENSSVLG00005007266) #29 PDSS2 (ENSSVLG00005007210) #30 SOBP (ENSSVLG00005007145) #31 SCML4 (ENSSVLG00005007050) #32 SEC63 (ENSSVLG00005006987) #33 OSTM1 (ENSSVLG00005006950) NR2E1 (ENSSVLG00005006886) SNX3 (ENSSVLG00005006830) Hystricomorpha ANCESTRAL SPECIES 41 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Naked mole-rat female MODERN SPECIES BVES (ENSHGLG00000032151) #19 LIN28B (ENSHGLG00000045791) #18 ENSHGLG00000020186 ENSHGLG00000041723 ENSHGLG00000038480 ENSHGLG00000041683 ENSHGLG00000043613 ENSHGLG00000000645 ENSHGLG00000043677 ENSHGLG00000000670 ENSHGLG00000044554 ENSHGLG00000041910 ENSHGLG00000032977 ENSHGLG00000009582 ENSHGLG00000006497 ENSHGLG00000004528 #22 ATG5 (ENSHGLG00000003994) #23 CRYBG1 (ENSHGLG00000002704) #24 RTN4IP1 (ENSHGLG00000005284) #25 QRSL1 (ENSHGLG00000003294) #26 ENSHGLG00000034826 ENSHGLG00000003147 #27 ENSHGLG00000045391 ENSHGLG00000002930 #28 BEND3 (ENSHGLG00000002571) #29 PDSS2 (ENSHGLG00000002304) #30 SOBP (ENSHGLG00000006724) #31 SCML4 (ENSHGLG00000013722) #32 ENSHGLG00000048253 SEC63 (ENSHGLG00000012594) #33 ENSHGLG00000041350 Hystricomorpha_a ANCESTRAL SPECIES 46 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Hystricomorpha_b ANCESTRAL SPECIES 41 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Long-tailed chinchilla MODERN SPECIES 118 ENSCLAG00000014198 PNISR (ENSCLAG00000013308) USP45 (ENSCLAG00000009237) ENSCLAG00000013053 CCNC (ENSCLAG00000011657) #8 PRDM13 (ENSCLAG00000010966) #9 SIM1 (ENSCLAG00000016085) #11 ENSCLAG00000014247 ASCC3 (ENSCLAG00000009794) #13 GRIK2 (ENSCLAG00000011506) #15 HACE1 (ENSCLAG00000016992) #17 LIN28B (ENSCLAG00000010534) #18 BVES (ENSCLAG00000010963) #19 POPDC3 (ENSCLAG00000011005) #20 PREP (ENSCLAG00000014176) #21 PRDM1 (ENSCLAG00000011847) #22 ATG5 (ENSCLAG00000012682) #23 CRYBG1 (ENSCLAG00000009357) #24 RTN4IP1 (ENSCLAG00000014920) #25 QRSL1 (ENSCLAG00000017367) #26 CD24 (ENSCLAG00000011622) #27 MTRES1 (ENSCLAG00000017356) #28 BEND3 (ENSCLAG00000009701) #29 PDSS2 (ENSCLAG00000011033) #30 SOBP (ENSCLAG00000009567) #31 SCML4 (ENSCLAG00000009941) #32 SEC63 (ENSCLAG00000010535) #33 OSTM1 (ENSCLAG00000014636) NR2E1 (ENSCLAG00000017092) SNX3 (ENSCLAG00000011964) AFG1L (ENSCLAG00000012599) Degu MODERN SPECIES 131 GRIK2 (ENSODEG00000013260) #15 ENSODEG00000013727 HACE1 (ENSODEG00000012251) #17 LIN28B (ENSODEG00000013568) #18 ENSODEG00000012968 BVES (ENSODEG00000015671) #19 POPDC3 (ENSODEG00000013364) #20 PREP (ENSODEG00000013267) #21 ENSODEG00000020071 ENSODEG00000013137 PRDM1 (ENSODEG00000012678) #22 ATG5 (ENSODEG00000012332) #23 CRYBG1 (ENSODEG00000013511) #24 RTN4IP1 (ENSODEG00000012956) #25 QRSL1 (ENSODEG00000012491) #26 ENSODEG00000014646 ENSODEG00000014020 ENSODEG00000013192 BEND3 (ENSODEG00000012604) #29 SOBP (ENSODEG00000014370) #31 SEC63 (ENSODEG00000012763) #33 ENSODEG00000014125 ENSODEG00000014366 ENSODEG00000013551 NR2E1 (ENSODEG00000014374) ENSODEG00000013844 Guinea pig MODERN SPECIES 63 SIM1 (ENSCPOG00000013987) #11 ASCC3 (ENSCPOG00000013989) #13 GRIK2 (ENSCPOG00000001674) #15 HACE1 (ENSCPOG00000001068) #17 LIN28B (ENSCPOG00000006178) #18 BVES (ENSCPOG00000034314) #19 POPDC3 (ENSCPOG00000040175) #20 PREP (ENSCPOG00000012377) #21 PRDM1 (ENSCPOG00000014064) #22 ATG5 (ENSCPOG00000014065) #23 ENSCPOG00000003512 #24 RTN4IP1 (ENSCPOG00000007055) #25 QRSL1 (ENSCPOG00000021670) #26 MTRES1 (ENSCPOG00000003134) #28 BEND3 (ENSCPOG00000036541) #29 PDSS2 (ENSCPOG00000009293) #30 SOBP (ENSCPOG00000012904) #31 SCML4 (ENSCPOG00000012909) #32 SEC63 (ENSCPOG00000002486) #33 OSTM1 (ENSCPOG00000010183) NR2E1 (ENSCPOG00000000097) SNX3 (ENSCPOG00000032088) AFG1L (ENSCPOG00000011326) ENSCPOG00000021906 Lagomorpha ANCESTRAL SPECIES 2 ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Rabbit MODERN SPECIES 3 ENSOCUG00000037630 SIM1 (ENSOCUG00000002759) #11 ASCC3 (ENSOCUG00000002766) #13 GRIK2 (ENSOCUG00000003845) #15 ENSOCUG00000021456 ENSOCUG00000021731 ENSOCUG00000022257 ENSOCUG00000001388 ENSOCUG00000000909 #17 ENSOCUG00000036629 ENSOCUG00000037658 #17 LIN28B (ENSOCUG00000017850) #18 BVES (ENSOCUG00000016944) #19 POPDC3 (ENSOCUG00000025973) #20 PREP (ENSOCUG00000000188) #21 PRDM1 (ENSOCUG00000015495) #22 ATG5 (ENSOCUG00000013358) #23 RTN4IP1 (ENSOCUG00000013383) #25 ENSOCUG00000033572 CRYBG1 (ENSOCUG00000013366) #24 QRSL1 (ENSOCUG00000028175) #26 MTRES1 (ENSOCUG00000011248) #28 ENSOCUG00000030127 BEND3 (ENSOCUG00000011254) #29 PDSS2 (ENSOCUG00000011259) #30 ENSOCUG00000030811 #31 SOBP (ENSOCUG00000027804) #31 ENSOCUG00000013095 #32 ENSOCUG00000035467 #32 SEC63 (ENSOCUG00000016430) #33 OSTM1 (ENSOCUG00000016073) Pika MODERN SPECIES 1512 PRDM1 (ENSOPRG00000006055) #22 ATG5 (ENSOPRG00000006074) #23 Tree shrew MODERN SPECIES 7302 PRDM1 (ENSTBEG00000004089) #22 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 Artiodactyla ANCESTRAL SPECIES 19 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 Suina ANCESTRAL SPECIES 18 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164601 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Pig MODERN SPECIES CCNC (ENSSSCG00000004353) #8 PRDM13 (ENSSSCG00000004354) #9 ENSSSCG00000004355 ENSSSCG00000031854 MCHR2 (ENSSSCG00000004356) #10 SIM1 (ENSSSCG00000004357) #11 ASCC3 (ENSSSCG00000004358) #13 GRIK2 (ENSSSCG00000004361) #15 HACE1 (ENSSSCG00000004364) #17 LIN28B (ENSSSCG00000037612) #18 BVES (ENSSSCG00000004366) #19 POPDC3 (ENSSSCG00000004367) #20 ENSSSCG00000045756 PREP (ENSSSCG00000004368) #21 ATG5 (ENSSSCG00000004370) #23 PRDM1 (ENSSSCG00000004369) #22 CRYBG1 (ENSSSCG00000004371) #24 ENSSSCG00000046528 ENSSSCG00000041504 RTN4IP1 (ENSSSCG00000004373) #25 QRSL1 (ENSSSCG00000004374) #26 CD24 (ENSSSCG00000056379) #27 ENSSSCG00000037071 MTRES1 (ENSSSCG00000037985) #28 BEND3 (ENSSSCG00000031159) #29 PDSS2 (ENSSSCG00000036168) #30 ENSSSCG00000043730 SOBP (ENSSSCG00000004379) #31 SCML4 (ENSSSCG00000033392) #32 ENSSSCG00000059436 SEC63 (ENSSSCG00000004382) #33 Chacoan peccary MODERN SPECIES 61 TSTD3 (ENSCWAG00000016927) #7 CCNC (ENSCWAG00000016964) #8 PRDM13 (ENSCWAG00000017092) #9 MCHR2 (ENSCWAG00000017138) #10 SIM1 (ENSCWAG00000017181) #11 ASCC3 (ENSCWAG00000017256) #13 GRIK2 (ENSCWAG00000017386) #15 HACE1 (ENSCWAG00000018801) #17 LIN28B (ENSCWAG00000018839) #18 BVES (ENSCWAG00000018883) #19 POPDC3 (ENSCWAG00000018902) #20 PREP (ENSCWAG00000018924) #21 ATG5 (ENSCWAG00000018963) #23 PRDM1 (ENSCWAG00000019085) #22 CRYBG1 (ENSCWAG00000019206) #24 RTN4IP1 (ENSCWAG00000019680) #25 QRSL1 (ENSCWAG00000019699) #26 ENSCWAG00000004851 MTRES1 (ENSCWAG00000004864) #28 BEND3 (ENSCWAG00000004892) #29 PDSS2 (ENSCWAG00000004925) #30 SOBP (ENSCWAG00000005052) #31 SCML4 (ENSCWAG00000005085) #32 SEC63 (ENSCWAG00000005214) #33 OSTM1 (ENSCWAG00000005241) NR2E1 (ENSCWAG00000005279) SNX3 (ENSCWAG00000005325) AFG1L (ENSCWAG00000005377) ENSCWAG00000005422 Artiodactyla_a ANCESTRAL SPECIES 21 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 Artiodactyla_b ANCESTRAL SPECIES 18 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 Cetacea ANCESTRAL SPECIES 18 ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01010000228757 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000158987.d ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.b #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT01000000221220 ENSGT00390000001965 #33 Odontoceti ANCESTRAL SPECIES 18 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01010000228757 ENSGT00940000155610 #15 ENSGT00940000164307 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000158987.d ENSGT00940000154798.a.d.a #22 ENSGT00390000004040.k.b ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT01000000221220 Odontoceti_a ANCESTRAL SPECIES 16 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01010000228757 ENSGT00940000155610 #15 ENSGT00940000164307 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000158987.d ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT01000000221220 ENSGT00390000001965 #33 Odontoceti_b ANCESTRAL SPECIES 18 ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01010000228757 ENSGT00940000155610 #15 ENSGT00940000164307 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000158987.d ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT01000000221220 ENSGT00390000001965 #33 Monodontidae ANCESTRAL SPECIES 18 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT01010000228757 ENSGT00940000155610 #15 ENSGT01100000263525.a.b.b.c.b ENSGT00390000011943.a.a.a.b.a.a ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000158987.d ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000004856.w.b ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.a #27 ENSGT00390000009366.l.a #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00390000012178.g.a.a ENSGT00940000154164.c #31 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 Beluga whale MODERN SPECIES 80 MCHR2 (ENSDLEG00000016838) #10 SIM1 (ENSDLEG00000016898) #11 ASCC3 (ENSDLEG00000016917) #13 ENSDLEG00000017014 GRIK2 (ENSDLEG00000017039) #15 ENSDLEG00000017099 ENSDLEG00000017104 ENSDLEG00000017112 ##12 ENSDLEG00000017116 HACE1 (ENSDLEG00000017132) #17 LIN28B (ENSDLEG00000017221) #18 BVES (ENSDLEG00000017267) #19 POPDC3 (ENSDLEG00000017299) #20 PREP (ENSDLEG00000017313) #21 ENSDLEG00000017350 PRDM1 (ENSDLEG00000017371) #22 ATG5 (ENSDLEG00000017390) #23 ENSDLEG00000017411 CRYBG1 (ENSDLEG00000017426) #24 ENSDLEG00000017458 ENSDLEG00000017491 RTN4IP1 (ENSDLEG00000017504) #25 QRSL1 (ENSDLEG00000017520) #26 ENSDLEG00000017555 #27 CUNH6orf203 (ENSDLEG00000017561) #28 BEND3 (ENSDLEG00000017572) #29 PDSS2 (ENSDLEG00000017583) #30 ENSDLEG00000017596 SOBP (ENSDLEG00000017615) #31 ENSDLEG00000017650 SCML4 (ENSDLEG00000017668) #32 Narwhal MODERN SPECIES 301 MCHR2 (ENSMMNG00015009778) #10 SIM1 (ENSMMNG00015009809) #11 ASCC3 (ENSMMNG00015009831) #13 ENSMMNG00015009869 GRIK2 (ENSMMNG00015009912) #15 ENSMMNG00015010086 ENSMMNG00015010090 ENSMMNG00015010104 HACE1 (ENSMMNG00015010135) #17 LIN28B (ENSMMNG00015010175) #18 BVES (ENSMMNG00015010194) #19 POPDC3 (ENSMMNG00015010209) #20 PREP (ENSMMNG00015010230) #21 ENSMMNG00015010265 ATG5 (ENSMMNG00015010296) #23 PRDM1 (ENSMMNG00015010356) #22 ENSMMNG00015010386 ENSMMNG00015010395 CRYBG1 (ENSMMNG00015010430) #24 ENSMMNG00015010497 RTN4IP1 (ENSMMNG00015010517) #25 QRSL1 (ENSMMNG00015010552) #26 ENSMMNG00015010579 #27 ENSMMNG00015010593 #28 BEND3 (ENSMMNG00015010606) #29 PDSS2 (ENSMMNG00015010632) #30 ENSMMNG00015010718 SOBP (ENSMMNG00015010729) #31 SCML4 (ENSMMNG00015010744) #32 ENSMMNG00015010768 SEC63 (ENSMMNG00015010793) #33 Vaquita MODERN SPECIES 3 PRDM13 (ENSPSNG00000016806) #9 MCHR2 (ENSPSNG00000016680) #10 ENSPSNG00000016595 #11 ASCC3 (ENSPSNG00000016505) #13 ENSPSNG00000016469 GRIK2 (ENSPSNG00000015353) #15 ENSPSNG00000015195 ENSPSNG00000015175 ENSPSNG00000015155 ENSPSNG00000015137 HACE1 (ENSPSNG00000014920) #17 LIN28B (ENSPSNG00000014731) #18 BVES (ENSPSNG00000014643) #19 POPDC3 (ENSPSNG00000014548) #20 PREP (ENSPSNG00000014450) #21 PRDM1 (ENSPSNG00000014233) #22 ENSPSNG00000014192 ATG5 (ENSPSNG00000014006) #23 ENSPSNG00000013913 ENSPSNG00000013855 CRYBG1 (ENSPSNG00000013720) #24 RTN4IP1 (ENSPSNG00000013614) #25 QRSL1 (ENSPSNG00000013527) #26 ENSPSNG00000013443 #27 MTRES1 (ENSPSNG00000013378) #28 BEND3 (ENSPSNG00000013346) #29 ENSPSNG00000013296 PDSS2 (ENSPSNG00000013250) #30 SOBP (ENSPSNG00000013126) #31 SCML4 (ENSPSNG00000012885) #32 ENSPSNG00000012847 Dolphin MODERN SPECIES 6413 PRDM1 (ENSTTRG00000012894) #22 Sperm whale MODERN SPECIES 1 ENSPCTG00005017463 PRDM13 (ENSPCTG00005017399) #9 MCHR2 (ENSPCTG00005017331) #10 ENSPCTG00005017310 ENSPCTG00005017288 SIM1 (ENSPCTG00005017163) #11 ASCC3 (ENSPCTG00005016900) #13 GRIK2 (ENSPCTG00005016045) #15 ENSPCTG00005016006 HACE1 (ENSPCTG00005015741) #17 LIN28B (ENSPCTG00005015601) #18 BVES (ENSPCTG00005015536) #19 POPDC3 (ENSPCTG00005015471) #20 PREP (ENSPCTG00005015210) #21 ENSPCTG00005015126 PRDM1 (ENSPCTG00005014867) #22 ENSPCTG00005014799 ATG5 (ENSPCTG00005014542) #23 ENSPCTG00005014481 ENSPCTG00005014468 CRYBG1 (ENSPCTG00005014434) #24 RTN4IP1 (ENSPCTG00005014223) #25 QRSL1 (ENSPCTG00005014148) #26 ENSPCTG00005014121 #27 C10H6orf203 (ENSPCTG00005014085) #28 BEND3 (ENSPCTG00005014036) #29 PDSS2 (ENSPCTG00005013948) #30 SOBP (ENSPCTG00005013850) #31 ENSPCTG00005013782 #32 ENSPCTG00005013758 SEC63 (ENSPCTG00005013601) #33 Blue whale MODERN SPECIES 3 MCHR2 (ENSBMSG00010009258) #10 ENSBMSG00010009250 SIM1 (ENSBMSG00010009233) #11 ENSBMSG00010009216 #13 ENSBMSG00010009205 #13 ENSBMSG00010009197 GRIK2 (ENSBMSG00010008932) #15 ENSBMSG00010008827 ENSBMSG00010008820 HACE1 (ENSBMSG00010008789) #17 LIN28B (ENSBMSG00010008757) #18 BVES (ENSBMSG00010008737) #19 POPDC3 (ENSBMSG00010008729) #20 PREP (ENSBMSG00010008712) #21 ENSBMSG00010015421 PRDM1 (ENSBMSG00010015211) #22 ENSBMSG00010015168 ATG5 (ENSBMSG00010015017) #23 ENSBMSG00010014960 CRYBG1 (ENSBMSG00010014861) #24 RTN4IP1 (ENSBMSG00010014817) #25 QRSL1 (ENSBMSG00010014781) #26 ENSBMSG00010014752 ENSBMSG00010014725 #27 MTRES1 (ENSBMSG00010014698) #28 BEND3 (ENSBMSG00010014671) #29 PDSS2 (ENSBMSG00010014650) #30 SOBP (ENSBMSG00010014588) #31 SCML4 (ENSBMSG00010014504) #32 ENSBMSG00010014487 SEC63 (ENSBMSG00010014432) #33 Pecora ANCESTRAL SPECIES 19 ENSGT00940000164601 ENSGT00940000164932 #7 ENSGT00940000155625 #8 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT01030000236423 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 Percora_a ANCESTRAL SPECIES 21 ENSGT00940000155625 #8 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT01030000236423 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT01010000228077 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 Bovidae ANCESTRAL SPECIES 21 ENSGT00940000155625 #8 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT01030000236423 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT01010000228077 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 Bovinae ANCESTRAL SPECIES 31 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.a ENSGT00510000046985.h.b.a.a.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT01030000236423 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00960000190646 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 Bos ANCESTRAL SPECIES 19 ENSGT00940000155625 #8 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.b.b ENSGT00510000046985.h.b.a.a.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00960000190646 ENSGT00950000186448 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 Bos_b ANCESTRAL SPECIES 24 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.b.b ENSGT00510000046985.h.b.a.a.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT01030000236423 ENSGT01100000263481.n.a.a.a.a.a.b.b.b ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b.e #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.y.a #32 ENSGT00950000186137 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000013102.e.b ENSGT00390000012341 Hybrid Bos Indicus MODERN SPECIES 28 ENSBIXG00005030383 SIM1 (ENSBIXG00005030367) #11 ASCC3 (ENSBIXG00005030349) #13 GRIK2 (ENSBIXG00005030262) #15 ENSBIXG00005030182 ENSBIXG00005030156 ENSBIXG00005030149 HACE1 (ENSBIXG00005030042) #17 LIN28B (ENSBIXG00005029958) #18 ENSBIXG00005029941 BVES (ENSBIXG00005029927) #19 POPDC3 (ENSBIXG00005029917) #20 PREP (ENSBIXG00005029865) #21 ENSBIXG00005029840 ENSBIXG00005029830 PRDM1 (ENSBIXG00005029779) #22 ATG5 (ENSBIXG00005029723) #23 CRYBG1 (ENSBIXG00005029620) #24 ENSBIXG00005029552 #25 ENSBIXG00005029500 #26 ENSBIXG00005029470 #27 MTRES1 (ENSBIXG00005029440) #28 BEND3 (ENSBIXG00005029403) #29 PDSS2 (ENSBIXG00005029375) #30 SOBP (ENSBIXG00005029342) #31 ENSBIXG00005029333 SCML4 (ENSBIXG00005029296) #32 SEC63 (ENSBIXG00005007877) #33 ENSBIXG00005007898 OSTM1 (ENSBIXG00005007909) ENSBIXG00005000025 Cow MODERN SPECIES 28 ENSBTAG00000054078 PRDM13 (ENSBTAG00000006095) #9 MCHR2 (ENSBTAG00000005449) #10 ENSBTAG00000052778 ENSBTAG00000014104 SIM1 (ENSBTAG00000002294) #11 ASCC3 (ENSBTAG00000020482) #13 GRIK2 (ENSBTAG00000033153) #15 ENSBTAG00000053858 ENSBTAG00000051738 HACE1 (ENSBTAG00000001533) #17 LIN28B (ENSBTAG00000043973) #18 BVES (ENSBTAG00000018790) #19 POPDC3 (ENSBTAG00000046017) #20 PREP (ENSBTAG00000016281) #21 PRDM1 (ENSBTAG00000000816) #22 ATG5 (ENSBTAG00000005400) #23 ENSBTAG00000052057 CRYBG1 (ENSBTAG00000017527) #24 RTN4IP1 (ENSBTAG00000017554) #25 QRSL1 (ENSBTAG00000017557) #26 ENSBTAG00000052465 #27 MTRES1 (ENSBTAG00000021398) #28 BEND3 (ENSBTAG00000012534) #29 PDSS2 (ENSBTAG00000021859) #30 ENSBTAG00000052829 SOBP (ENSBTAG00000019175) #31 SCML4 (ENSBTAG00000005699) #32 SEC63 (ENSBTAG00000016562) #33 ENSBTAG00000023792 OSTM1 (ENSBTAG00000010134) Bos_a ANCESTRAL SPECIES 18 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.b.b ENSGT00510000046985.h.b.a.a.b ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.i.b ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000158886.g.b ENSGT00940000156693 ENSGT00940000153609.b Domestic yak MODERN SPECIES 1 ENSBGRG00000003627 SIM1 (ENSBGRG00000003658) #11 ASCC3 (ENSBGRG00000003723) #13 GRIK2 (ENSBGRG00000003805) #15 ENSBGRG00000004053 ENSBGRG00000004076 HACE1 (ENSBGRG00000004127) #17 ENSBGRG00000004777 LIN28B (ENSBGRG00000004803) #18 BVES (ENSBGRG00000004850) #19 POPDC3 (ENSBGRG00000005006) #20 PREP (ENSBGRG00000005031) #21 ENSBGRG00000005140 ENSBGRG00000005146 ENSBGRG00000005152 PRDM1 (ENSBGRG00000005178) #22 ATG5 (ENSBGRG00000005379) #23 CRYBG1 (ENSBGRG00000005685) #24 RTN4IP1 (ENSBGRG00000006146) #25 ENSBGRG00000006262 QRSL1 (ENSBGRG00000006270) #26 ENSBGRG00000006311 ENSBGRG00000006389 #27 ENSBGRG00000006411 #27 MTRES1 (ENSBGRG00000006439) #28 ENSBGRG00000006478 PDSS2 (ENSBGRG00000006508) #30 SOBP (ENSBGRG00000006590) #31 SCML4 (ENSBGRG00000006677) #32 SEC63 (ENSBGRG00000006724) #33 OSTM1 (ENSBGRG00000006844) Wild yak MODERN SPECIES 1304 ENSBMUG00000022963 ENSBMUG00000022972 HACE1 (ENSBMUG00000023019) #17 LIN28B (ENSBMUG00000023040) #18 BVES (ENSBMUG00000023051) #19 POPDC3 (ENSBMUG00000023059) #20 PREP (ENSBMUG00000023073) #21 ENSBMUG00000023085 PRDM1 (ENSBMUG00000023100) #22 ATG5 (ENSBMUG00000023134) #23 American bison MODERN SPECIES 3287 ENSBBBG00000010496 ENSBBBG00000001834 ENSBBBG00000010497 HACE1 (ENSBBBG00000010526) #17 LIN28B (ENSBBBG00000010534) #18 BVES (ENSBBBG00000010549) #19 POPDC3 (ENSBBBG00000007299) #20 ENSBBBG00000001850 PREP (ENSBBBG00000010572) #21 ENSBBBG00000001852 PRDM1 (ENSBBBG00000010598) #22 ATG5 (ENSBBBG00000010625) #23 ENSBBBG00000010638 ENSBBBG00000010639 CRYBG1 (ENSBBBG00000010653) #24 RTN4IP1 (ENSBBBG00000001868) #25 ENSBBBG00000010682 #26 ENSBBBG00000010700 ENSBBBG00000010715 MTRES1 (ENSBBBG00000001874) #28 BEND3 (ENSBBBG00000001878) #29 PDSS2 (ENSBBBG00000010733) #30 ENSBBBG00000010739 #31 ENSBBBG00000001880 SCML4 (ENSBBBG00000001886) #32 SEC63 (ENSBBBG00000010770) #33 Caprinae ANCESTRAL SPECIES 33 ENSGT00940000164932 #7 ENSGT00940000155625.c #8 ENSGT00940000154550.a.e.b.b ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000155206.c.a ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT01010000228077 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866.c #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000158886.g.b ENSGT00940000156693 Rambouillet Sheep MODERN SPECIES 24 ENSOARG00020004536 ENSOARG00020004479 ENSOARG00020004455 ENSOARG00020004427 ENSOARG00020004386 ENSOARG00020004377 ENSOARG00020004367 HACE1 (ENSOARG00020003313) #17 LIN28B (ENSOARG00020003103) #18 ENSOARG00020014675 BVES (ENSOARG00020014598) #19 POPDC3 (ENSOARG00020014545) #20 PREP (ENSOARG00020014297) #21 ENSOARG00020014217 CYCS (ENSOARG00020014198) PRDM1 (ENSOARG00020013852) #22 ATG5 (ENSOARG00020013575) #23 ENSOARG00020013506 CRYBG1 (ENSOARG00020012867) #24 RTN4IP1 (ENSOARG00020012231) #25 QRSL1 (ENSOARG00020011934) #26 CD24 (ENSOARG00020011839) #27 MTRES1 (ENSOARG00020011697) #28 BEND3 (ENSOARG00020011619) #29 PDSS2 (ENSOARG00020011577) #30 SOBP (ENSOARG00020011474) #31 SCML4 (ENSOARG00020011208) #32 SEC63 (ENSOARG00020011009) #33 OSTM1 (ENSOARG00020010926) NR2E1 (ENSOARG00020010722) SNX3 (ENSOARG00020010555) Goat MODERN SPECIES 28 MCHR2 (ENSCHIG00000014417) #10 ENSCHIG00000009763 SIM1 (ENSCHIG00000010900) #11 ASCC3 (ENSCHIG00000023605) #13 GRIK2 (ENSCHIG00000021980) #15 ENSCHIG00000015656 ENSCHIG00000018302 ENSCHIG00000009503 ENSCHIG00000025858 HACE1 (ENSCHIG00000025754) #17 ENSCHIG00000015439 LIN28B (ENSCHIG00000011133) #18 BVES (ENSCHIG00000008491) #19 POPDC3 (ENSCHIG00000016800) #20 PREP (ENSCHIG00000019257) #21 PRDM1 (ENSCHIG00000023368) #22 ATG5 (ENSCHIG00000019684) #23 CRYBG1 (ENSCHIG00000020732) #24 RTN4IP1 (ENSCHIG00000011362) #25 ENSCHIG00000017313 #26 CD24 (ENSCHIG00000015151) #27 MTRES1 (ENSCHIG00000005527) #28 BEND3 (ENSCHIG00000010728) #29 PDSS2 (ENSCHIG00000015163) #30 SOBP (ENSCHIG00000007832) #31 SCML4 (ENSCHIG00000010706) #32 SEC63 (ENSCHIG00000021240) #33 OSTM1 (ENSCHIG00000017859) ENSCHIG00000023983 NR2E1 (ENSCHIG00000020755) SNX3 (ENSCHIG00000003391) Siberian musk deer MODERN SPECIES 57 ENSMMSG00000011452 PRDM13 (ENSMMSG00000011437) #9 MCHR2 (ENSMMSG00000011392) #10 ENSMMSG00000011367 SIM1 (ENSMMSG00000011342) #11 ASCC3 (ENSMMSG00000011234) #13 GRIK2 (ENSMMSG00000010751) #15 ENSMMSG00000010701 ENSMMSG00000010683 HACE1 (ENSMMSG00000010633) #17 LIN28B (ENSMMSG00000010589) #18 ENSMMSG00000010511 BVES (ENSMMSG00000010405) #19 POPDC3 (ENSMMSG00000010364) #20 PREP (ENSMMSG00000010324) #21 PRDM1 (ENSMMSG00000010156) #22 ATG5 (ENSMMSG00000009989) #23 CRYBG1 (ENSMMSG00000009812) #24 RTN4IP1 (ENSMMSG00000009752) #25 QRSL1 (ENSMMSG00000009700) #26 ENSMMSG00000009682 CD24 (ENSMMSG00000009656) #27 MTRES1 (ENSMMSG00000009604) #28 BEND3 (ENSMMSG00000009582) #29 ENSMMSG00000009562 PDSS2 (ENSMMSG00000009520) #30 SOBP (ENSMMSG00000009483) #31 SCML4 (ENSMMSG00000009358) #32 SEC63 (ENSMMSG00000009260) #33 OSTM1 (ENSMMSG00000009222) ENSMMSG00000009182 Yarkand deer MODERN SPECIES 20 ENSCHYG00000024960 PRDM13 (ENSCHYG00000024927) #9 ENSCHYG00000024861 SIM1 (ENSCHYG00000024834) #11 ASCC3 (ENSCHYG00000024791) #13 GRIK2 (ENSCHYG00000024358) #15 ENSCHYG00000024291 ENSCHYG00000024278 ENSCHYG00000024260 HACE1 (ENSCHYG00000023545) #17 LIN28B (ENSCHYG00000023383) #18 BVES (ENSCHYG00000023334) #19 POPDC3 (ENSCHYG00000023314) #20 ENSCHYG00000023289 PREP (ENSCHYG00000023040) #21 PRDM1 (ENSCHYG00000022882) #22 ATG5 (ENSCHYG00000022719) #23 CRYBG1 (ENSCHYG00000022057) #24 RTN4IP1 (ENSCHYG00000021960) #25 QRSL1 (ENSCHYG00000021880) #26 ENSCHYG00000021838 #27 MTRES1 (ENSCHYG00000021800) #28 BEND3 (ENSCHYG00000021757) #29 ENSCHYG00000021717 PDSS2 (ENSCHYG00000021575) #30 SOBP (ENSCHYG00000021447) #31 SCML4 (ENSCHYG00000021381) #32 SEC63 (ENSCHYG00000020896) #33 OSTM1 (ENSCHYG00000020769) ENSCHYG00000020693 ENSCHYG00000020616 Camelidae ANCESTRAL SPECIES 26 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00410000028929 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.g.b #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Alpaca MODERN SPECIES 912 PRDM1 (ENSVPAG00000011363) #22 ATG5 (ENSVPAG00000011364) #23 CRYBG1 (ENSVPAG00000011365) #24 RTN4IP1 (ENSVPAG00000011366) #25 QRSL1 (ENSVPAG00000011367) #26 ENSVPAG00000011368 #27 MTRES1 (ENSVPAG00000011369) #28 BEND3 (ENSVPAG00000011370) #29 PDSS2 (ENSVPAG00000011371) #30 ENSVPAG00000011372 SOBP (ENSVPAG00000011373) #31 SCML4 (ENSVPAG00000011375) #32 SEC63 (ENSVPAG00000011376) #33 Arabian camel MODERN SPECIES 34 ENSCDRG00005015288 USP45 (ENSCDRG00005015163) ENSCDRG00005015124 CCNC (ENSCDRG00005014798) #8 PRDM13 (ENSCDRG00005014704) #9 MCHR2 (ENSCDRG00005014661) #10 SIM1 (ENSCDRG00005014556) #11 ASCC3 (ENSCDRG00005014245) #13 GRIK2 (ENSCDRG00005012001) #15 ENSCDRG00005011925 HACE1 (ENSCDRG00005011438) #17 LIN28B (ENSCDRG00005011271) #18 BVES (ENSCDRG00005011229) #19 POPDC3 (ENSCDRG00005011183) #20 PREP (ENSCDRG00005010990) #21 PRDM1 (ENSCDRG00005010476) #22 ATG5 (ENSCDRG00005010191) #23 ENSCDRG00005010087 #24 RTN4IP1 (ENSCDRG00005009990) #25 QRSL1 (ENSCDRG00005009875) #26 ENSCDRG00005009820 #27 MTRES1 (ENSCDRG00005009712) #28 BEND3 (ENSCDRG00005009651) #29 PDSS2 (ENSCDRG00005009549) #30 ENSCDRG00005009503 #31 SCML4 (ENSCDRG00005009375) #32 SEC63 (ENSCDRG00005009103) #33 OSTM1 (ENSCDRG00005009034) NR2E1 (ENSCDRG00005008907) SNX3 (ENSCDRG00005008756) AFG1L (ENSCDRG00005008669) Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Carnivora ANCESTRAL SPECIES 4 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Caniformia ANCESTRAL SPECIES 3 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Caniformia_b ANCESTRAL SPECIES 6 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Ursidae ANCESTRAL SPECIES 22 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000153664.A.a.m.b.b.a.a ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.a #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 Ursus ANCESTRAL SPECIES ENSGT00940000154798.a.d.a #22 American black bear MODERN SPECIES 2237 PRDM1 (ENSUAMG00000010816) #22 Giant Panda MODERN SPECIES 1 PRDM13 (ENSAMEG00000008949) #9 ENSAMEG00000028942 MCHR2 (ENSAMEG00000014776) #10 SIM1 (ENSAMEG00000014765) #11 ASCC3 (ENSAMEG00000014749) #13 ENSAMEG00000027241 ENSAMEG00000029057 GRIK2 (ENSAMEG00000005434) #15 HACE1 (ENSAMEG00000011456) #17 LIN28B (ENSAMEG00000011453) #18 ENSAMEG00000026936 BVES (ENSAMEG00000028861) #19 POPDC3 (ENSAMEG00000011433) #20 PREP (ENSAMEG00000011361) #21 ATG5 (ENSAMEG00000001503) #23 PRDM1 (ENSAMEG00000001482) #22 CRYBG1 (ENSAMEG00000001523) #24 ENSAMEG00000024019 ENSAMEG00000029538 #25 QRSL1 (ENSAMEG00000002571) #26 CD24 (ENSAMEG00000031404) #27 MTRES1 (ENSAMEG00000008052) #28 ENSAMEG00000023827 BEND3 (ENSAMEG00000008053) #29 PDSS2 (ENSAMEG00000008056) #30 ENSAMEG00000025863 #31 SOBP (ENSAMEG00000008061) #31 SCML4 (ENSAMEG00000008065) #32 SEC63 (ENSAMEG00000008074) #33 OSTM1 (ENSAMEG00000008114) NR2E1 (ENSAMEG00000008117) Mustelinae ANCESTRAL SPECIES 26 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Ferret MODERN SPECIES 201 ENSMPUG00000009479 #17 ENSMPUG00000009481 LIN28B (ENSMPUG00000009489) #18 BVES (ENSMPUG00000009502) #19 POPDC3 (ENSMPUG00000009505) #20 PREP (ENSMPUG00000009513) #21 PRDM1 (ENSMPUG00000009522) #22 ATG5 (ENSMPUG00000009534) #23 CRYBG1 (ENSMPUG00000009543) #24 RTN4IP1 (ENSMPUG00000009654) #25 QRSL1 (ENSMPUG00000009661) #26 CD24 (ENSMPUG00000009669) #27 MTRES1 (ENSMPUG00000009672) #28 ENSMPUG00000019102 BEND3 (ENSMPUG00000009678) #29 PDSS2 (ENSMPUG00000009682) #30 ENSMPUG00000009693 SOBP (ENSMPUG00000009696) #31 SCML4 (ENSMPUG00000009746) #32 ENSMPUG00000009747 SEC63 (ENSMPUG00000009752) #33 ENSMPUG00000009757 American mink MODERN SPECIES 4 GRIK2 (ENSNVIG00000003341) #15 ENSNVIG00000003598 HACE1 (ENSNVIG00000003630) #17 LIN28B (ENSNVIG00000003725) #18 POPD1 (ENSNVIG00000003747) #19 POPD3 (ENSNVIG00000003813) #20 PREP (ENSNVIG00000003825) #21 PRDM1 (ENSNVIG00000003863) #22 ATG5 (ENSNVIG00000003945) #23 CRYBG1 (ENSNVIG00000003998) #24 ENSNVIG00000004058 RTN4IP1 (ENSNVIG00000004067) #25 QRSL1 (ENSNVIG00000004081) #26 ENSNVIG00000004145 #27 MTRES1 (ENSNVIG00000004157) #28 BEND3 (ENSNVIG00000004176) #29 PDSS2 (ENSNVIG00000004192) #30 ENSNVIG00000004244 SOBP (ENSNVIG00000004254) #31 ENSNVIG00000004283 #32 ENSNVIG00000004288 #32 SEC63 (ENSNVIG00000004305) #33 ENSNVIG00000004361 Canidae ANCESTRAL SPECIES 6 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000167379 ENSGT00940000160200 #9 ENSGT01050000247939 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a.d #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.a #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00940000163155 ENSGT00940000155625.o.b #8 ENSGT00940000160200 #9 ENSGT01050000247939 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000154399.a.b.a.a ENSGT00940000154737.d ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a.d #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.a #32 ENSGT00940000157463.y.b #32 ENSGT00390000001965 #33 ENSGT00390000012341 Dog MODERN SPECIES 3 ENSCAFG00845005709 #8 PRDM13 (ENSCAFG00845005747) #9 ENSCAFG00845005768 MCHR2 (ENSCAFG00845005808) #10 SIM1 (ENSCAFG00845005849) #11 ASCC3 (ENSCAFG00845005906) #13 RPL3 (ENSCAFG00845005950) GRIK2 (ENSCAFG00845006184) #15 ENSCAFG00845006825 ENSCAFG00845006846 HACE1 (ENSCAFG00845006967) #17 LIN28B (ENSCAFG00845007472) #18 BVES (ENSCAFG00845007542) #19 POPDC3 (ENSCAFG00845007572) #20 PREP (ENSCAFG00845007652) #21 PRDM1 (ENSCAFG00845007842) #22 ATG5 (ENSCAFG00845007954) #23 CRYBG1 (ENSCAFG00845008056) #24 RTN4IP1 (ENSCAFG00845008205) #25 QRSL1 (ENSCAFG00845008279) #26 ENSCAFG00845008352 #27 MTRES1 (ENSCAFG00845008387) #28 ENSCAFG00845008420 BEND3 (ENSCAFG00845008452) #29 PDSS2 (ENSCAFG00845008531) #30 SOBP (ENSCAFG00845008693) #31 SCML4 (ENSCAFG00845008805) #32 SEC63 (ENSCAFG00845008872) #33 OSTM1 (ENSCAFG00845008927) NR2E1 (ENSCAFG00845008978) SNX3 (ENSCAFG00845009178) Dingo MODERN SPECIES 370 PRDM13 (ENSCAFG00020016828) #9 ENSCAFG00020016831 ENSCAFG00020016837 MCHR2 (ENSCAFG00020016844) #10 SIM1 (ENSCAFG00020016848) #11 ASCC3 (ENSCAFG00020016899) #13 ENSCAFG00020017193 GRIK2 (ENSCAFG00020017210) #15 ENSCAFG00020017309 ENSCAFG00020017311 HACE1 (ENSCAFG00020017333) #17 LIN28B (ENSCAFG00020017606) #18 BVES (ENSCAFG00020017609) #19 POPDC3 (ENSCAFG00020017612) #20 PREP (ENSCAFG00020017616) #21 PRDM1 (ENSCAFG00020017630) #22 ATG5 (ENSCAFG00020017640) #23 CRYBG1 (ENSCAFG00020017663) #24 ENSCAFG00020017786 RTN4IP1 (ENSCAFG00020017789) #25 QRSL1 (ENSCAFG00020017795) #26 MTRES1 (ENSCAFG00020017801) #28 BEND3 (ENSCAFG00020017802) #29 PDSS2 (ENSCAFG00020017808) #30 SOBP (ENSCAFG00020017814) #31 ENSCAFG00020017819 #32 ENSCAFG00020017824 #32 SEC63 (ENSCAFG00020017827) #33 OSTM1 (ENSCAFG00020017831) NR2E1 (ENSCAFG00020017858) ENSCAFG00020017882 Red fox MODERN SPECIES 54 ENSVVUG00000003647 ENSVVUG00000003658 HACE1 (ENSVVUG00000003691) #17 LIN28B (ENSVVUG00000003739) #18 BVES (ENSVVUG00000003754) #19 POPDC3 (ENSVVUG00000003775) #20 PREP (ENSVVUG00000003825) #21 PRDM1 (ENSVVUG00000004465) #22 ATG5 (ENSVVUG00000004478) #23 CRYBG1 (ENSVVUG00000004496) #24 RTN4IP1 (ENSVVUG00000004632) #25 QRSL1 (ENSVVUG00000004637) #26 ENSVVUG00000004648 #28 BEND3 (ENSVVUG00000004649) #29 ENSVVUG00000004652 PDSS2 (ENSVVUG00000004658) #30 SOBP (ENSVVUG00000004706) #31 ENSVVUG00000004735 ENSVVUG00000004745 #32 ENSVVUG00000004750 #32 SEC63 (ENSVVUG00000004763) #33 OSTM1 (ENSVVUG00000004771) ENSVVUG00000004795 Felidae ANCESTRAL SPECIES 5 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00390000010020 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00940000153096.b.c.b.a.a.c.a ENSGT00550000074820.g.b.b Panthera ANCESTRAL SPECIES 7 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00940000153096.b.c.b.a.a.c.a ENSGT00550000074820.g.b.b ENSGT00390000012341 Panthera_a ANCESTRAL SPECIES 4 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00900000143654 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.f.a #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00550000074820.g.b.b ENSGT00390000012341 ENSGT00940000156693 lion MODERN SPECIES 5 PNISR (ENSPLOG00000018238) USP45 (ENSPLOG00000018326) ENSPLOG00000018440 CCNC (ENSPLOG00000018493) #8 PRDM13 (ENSPLOG00000018587) #9 MCHR2 (ENSPLOG00000018660) #10 SIM1 (ENSPLOG00000018732) #11 ASCC3 (ENSPLOG00000018850) #13 GRIK2 (ENSPLOG00000019023) #15 HACE1 (ENSPLOG00000000538) #17 LIN28B (ENSPLOG00000000691) #18 ENSPLOG00000000717 BVES (ENSPLOG00000000733) #19 POPDC3 (ENSPLOG00000000761) #20 PREP (ENSPLOG00000000781) #21 PRDM1 (ENSPLOG00000000820) #22 ATG5 (ENSPLOG00000000881) #23 CRYBG1 (ENSPLOG00000000953) #24 ENSPLOG00000000998 RTN4IP1 (ENSPLOG00000001021) #25 QRSL1 (ENSPLOG00000001072) #26 CD24 (ENSPLOG00000001102) #27 MTRES1 (ENSPLOG00000001114) #28 BEND3 (ENSPLOG00000001134) #29 ENSPLOG00000001144 PDSS2 (ENSPLOG00000001162) #30 SOBP (ENSPLOG00000001199) #31 SCML4 (ENSPLOG00000001239) #32 SEC63 (ENSPLOG00000001298) #33 ENSPLOG00000001352 OSTM1 (ENSPLOG00000001361) leopard MODERN SPECIES 8 PRDM13 (ENSPPRG00000014466) #9 ENSPPRG00000013407 ENSPPRG00000013213 MCHR2 (ENSPPRG00000012296) #10 SIM1 (ENSPPRG00000012016) #11 ASCC3 (ENSPPRG00000011358) #13 ENSPPRG00000009471 GRIK2 (ENSPPRG00000007805) #15 ENSPPRG00000002223 ENSPPRG00000001508 HACE1 (ENSPPRG00000021923) #17 LIN28B (ENSPPRG00000016158) #18 BVES (ENSPPRG00000015358) #19 POPDC3 (ENSPPRG00000013616) #20 PREP (ENSPPRG00000013298) #21 PRDM1 (ENSPPRG00000011148) #22 ATG5 (ENSPPRG00000012874) #23 CRYBG1 (ENSPPRG00000010238) #24 RTN4IP1 (ENSPPRG00000009483) #25 QRSL1 (ENSPPRG00000008093) #26 CD24 (ENSPPRG00000006861) #27 ENSPPRG00000006560 MTRES1 (ENSPPRG00000006302) #28 BEND3 (ENSPPRG00000006060) #29 PDSS2 (ENSPPRG00000005402) #30 SOBP (ENSPPRG00000003897) #31 SCML4 (ENSPPRG00000003028) #32 SEC63 (ENSPPRG00000001303) #33 ENSPPRG00000022699 OSTM1 (ENSPPRG00000023255) NR2E1 (ENSPPRG00000022189) Tiger MODERN SPECIES 224 HACE1 (ENSPTIG00000009969) #17 LIN28B (ENSPTIG00000009405) #18 BVES (ENSPTIG00000009214) #19 POPDC3 (ENSPTIG00000009134) #20 PREP (ENSPTIG00000008923) #21 PRDM1 (ENSPTIG00000008628) #22 ATG5 (ENSPTIG00000008326) #23 CRYBG1 (ENSPTIG00000006860) #24 RTN4IP1 (ENSPTIG00000006502) #25 QRSL1 (ENSPTIG00000005922) #26 Cat MODERN SPECIES 236 PNISR (ENSFCAG00000007165) USP45 (ENSFCAG00000007166) ENSFCAG00000026591 CCNC (ENSFCAG00000007731) #8 PRDM13 (ENSFCAG00000040508) #9 ENSFCAG00000024211 MCHR2 (ENSFCAG00000022111) #10 SIM1 (ENSFCAG00000005942) #11 ASCC3 (ENSFCAG00000031266) #13 GRIK2 (ENSFCAG00000011846) #15 HACE1 (ENSFCAG00000022001) #17 LIN28B (ENSFCAG00000044308) #18 BVES (ENSFCAG00000005059) #19 POPDC3 (ENSFCAG00000005060) #20 PREP (ENSFCAG00000005061) #21 PRDM1 (ENSFCAG00000010755) #22 ATG5 (ENSFCAG00000031909) #23 CRYBG1 (ENSFCAG00000005094) #24 ENSFCAG00000053486 RTN4IP1 (ENSFCAG00000030660) #25 QRSL1 (ENSFCAG00000005096) #26 ENSFCAG00000032455 #27 MTRES1 (ENSFCAG00000046698) #28 BEND3 (ENSFCAG00000008869) #29 ENSFCAG00000051054 PDSS2 (ENSFCAG00000024608) #30 SOBP (ENSFCAG00000028431) #31 SCML4 (ENSFCAG00000003739) #32 SEC63 (ENSFCAG00000002253) #33 ENSFCAG00000024634 OSTM1 (ENSFCAG00000024755) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Chiroptera ANCESTRAL SPECIES 3 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Megabat MODERN SPECIES 5184 PRDM1 (ENSPVAG00000011732) #22 ATG5 (ENSPVAG00000011733) #23 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00900000143654 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Microbat MODERN SPECIES 1153 PRDM1 (ENSMLUG00000014085) #22 ATG5 (ENSMLUG00000014090) #23 CRYBG1 (ENSMLUG00000002929) #24 RTN4IP1 (ENSMLUG00000002947) #25 QRSL1 (ENSMLUG00000025602) #26 MTRES1 (ENSMLUG00000009524) #28 ENSMLUG00000002326 BEND3 (ENSMLUG00000002324) #29 PDSS2 (ENSMLUG00000002328) #30 SOBP (ENSMLUG00000029995) #31 SCML4 (ENSMLUG00000005526) #32 SEC63 (ENSMLUG00000005529) #33 ENSMLUG00000030351 OSTM1 (ENSMLUG00000005540) NR2E1 (ENSMLUG00000005543) Greater horseshoe bat MODERN SPECIES 21 CCNC (ENSRFEG00010002800) #8 PRDM13 (ENSRFEG00010002847) #9 MCHR2 (ENSRFEG00010002876) #10 SIM1 (ENSRFEG00010002901) #11 ASCC3 (ENSRFEG00010002943) #13 ENSRFEG00010003009 GRIK2 (ENSRFEG00010003101) #15 ENSRFEG00010003239 ENSRFEG00010003252 HACE1 (ENSRFEG00010003307) #17 LIN28B (ENSRFEG00010003383) #18 BVES (ENSRFEG00010003402) #19 POPDC3 (ENSRFEG00010003422) #20 PREP (ENSRFEG00010003440) #21 ATG5 (ENSRFEG00010003510) #23 PRDM1 (ENSRFEG00010003594) #22 RTN4IP1 (ENSRFEG00010003684) #25 ENSRFEG00010003711 CRYBG1 (ENSRFEG00010003739) #24 QRSL1 (ENSRFEG00010003777) #26 ENSRFEG00010003796 #27 MTRES1 (ENSRFEG00010003814) #28 BEND3 (ENSRFEG00010010319) #29 PDSS2 (ENSRFEG00010010408) #30 SOBP (ENSRFEG00010010519) #31 SCML4 (ENSRFEG00010010598) #32 SEC63 (ENSRFEG00010010840) #33 OSTM1 (ENSRFEG00010010906) NR2E1 (ENSRFEG00010010957) SNX3 (ENSRFEG00010011106) AFG1L (ENSRFEG00010011287) Equus ANCESTRAL SPECIES 29 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829.b #27 ENSGT00390000009366 #28 ENSGT00390000010020 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463.z #32 ENSGT00940000157463.y.a #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Horse MODERN SPECIES 1 TSTD3 (ENSECAG00000024361) CCNC (ENSECAG00000024439) #8 PRDM13 (ENSECAG00000007855) #9 MCHR2 (ENSECAG00000008037) #10 SIM1 (ENSECAG00000009161) #11 ASCC3 (ENSECAG00000012013) #13 GRIK2 (ENSECAG00000020215) #15 ENSECAG00000053938 ENSECAG00000059064 ##12 HACE1 (ENSECAG00000015445) #17 LIN28B (ENSECAG00000020994) #18 BVES (ENSECAG00000038417) #19 POPDC3 (ENSECAG00000021367) #20 PREP (ENSECAG00000023502) #21 ENSECAG00000053373 PRDM1 (ENSECAG00000009044) #22 CRYBG1 (ENSECAG00000015079) #24 ATG5 (ENSECAG00000013971) #23 RTN4IP1 (ENSECAG00000019289) #25 QRSL1 (ENSECAG00000021023) #26 ENSECAG00000031607 #27 MTRES1 (ENSECAG00000023985) #28 ENSECAG00000047274 BEND3 (ENSECAG00000023993) #29 PDSS2 (ENSECAG00000024085) #30 ENSECAG00000052219 SOBP (ENSECAG00000036081) #31 SCML4 (ENSECAG00000024152) #32 ENSECAG00000046423 SEC63 (ENSECAG00000006392) #33 OSTM1 (ENSECAG00000016887) Donkey MODERN SPECIES 16 USP45 (ENSEASG00005006164) ENSEASG00005035127 CCNC (ENSEASG00005006285) #8 PRDM13 (ENSEASG00005006291) #9 MCHR2 (ENSEASG00005006295) #10 SIM1 (ENSEASG00005006300) #11 ASCC3 (ENSEASG00005006324) #13 GRIK2 (ENSEASG00005006419) #15 ENSEASG00005027604 HACE1 (ENSEASG00005006421) #17 LIN28B (ENSEASG00005026575) #18 BVES (ENSEASG00005006423) #19 POPDC3 (ENSEASG00005006424) #20 PREP (ENSEASG00005006425) #21 ENSEASG00005033880 PRDM1 (ENSEASG00005006427) #22 ATG5 (ENSEASG00005006428) #23 CRYBG1 (ENSEASG00005006430) #24 RTN4IP1 (ENSEASG00005006435) #25 QRSL1 (ENSEASG00005006438) #26 ENSEASG00005006439 #27 MTRES1 (ENSEASG00005006440) #28 ENSEASG00005029634 BEND3 (ENSEASG00005037754) #29 PDSS2 (ENSEASG00005006444) #30 SOBP (ENSEASG00005006446) #31 ENSEASG00005028878 #32 SCML4 (ENSEASG00005006447) #32 SEC63 (ENSEASG00005006449) #33 OSTM1 (ENSEASG00005006451) NR2E1 (ENSEASG00005006452) Eulipotyphla ANCESTRAL SPECIES 1079 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Hedgehog MODERN SPECIES 4067 PRDM1 (ENSEEUG00000013222) #22 ATG5 (ENSEEUG00000013272) #23 Common shrew MODERN SPECIES 12504 PRDM1 (ENSSARG00000004079) #22 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Xenarthra ANCESTRAL SPECIES 351 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 Sloth MODERN SPECIES 3845 PRDM1 (ENSCHOG00000011220) #22 Armadillo MODERN SPECIES 3892 ENSDNOG00000032448 HACE1 (ENSDNOG00000015667) #17 ENSDNOG00000040003 LIN28B (ENSDNOG00000015300) #18 ENSDNOG00000033014 #19 POPDC3 (ENSDNOG00000041457) #20 PREP (ENSDNOG00000000259) #21 PRDM1 (ENSDNOG00000044646) #22 ATG5 (ENSDNOG00000013004) #23 ENSDNOG00000046752 CRYBG1 (ENSDNOG00000006946) #24 RTN4IP1 (ENSDNOG00000006973) #25 QRSL1 (ENSDNOG00000006990) #26 ENSDNOG00000014433 #28 BEND3 (ENSDNOG00000035050) #29 PDSS2 (ENSDNOG00000000559) #30 Afrotheria ANCESTRAL SPECIES 13 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Afrotheria_a ANCESTRAL SPECIES 13 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Elephant MODERN SPECIES 1 COQ3 (ENSLAFG00000006127) PNISR (ENSLAFG00000027683) USP45 (ENSLAFG00000008357) CCNC (ENSLAFG00000002112) #8 PRDM13 (ENSLAFG00000012439) #9 MCHR2 (ENSLAFG00000008248) #10 SIM1 (ENSLAFG00000006594) #11 ENSLAFG00000029874 ASCC3 (ENSLAFG00000011363) #13 GRIK2 (ENSLAFG00000016101) #15 HACE1 (ENSLAFG00000002989) #17 LIN28B (ENSLAFG00000017788) #18 BVES (ENSLAFG00000009474) #19 POPDC3 (ENSLAFG00000018065) #20 PREP (ENSLAFG00000006151) #21 PRDM1 (ENSLAFG00000013436) #22 ATG5 (ENSLAFG00000017057) #23 ENSLAFG00000026098 #24 RTN4IP1 (ENSLAFG00000006744) #25 QRSL1 (ENSLAFG00000012887) #26 CD24 (ENSLAFG00000007742) #27 MTRES1 (ENSLAFG00000005301) #28 BEND3 (ENSLAFG00000005298) #29 PDSS2 (ENSLAFG00000013247) #30 SOBP (ENSLAFG00000013670) #31 ENSLAFG00000013674 #32 SEC63 (ENSLAFG00000017896) #33 OSTM1 (ENSLAFG00000000313) NR2E1 (ENSLAFG00000013583) SNX3 (ENSLAFG00000018131) AFG1L (ENSLAFG00000005829) Hyrax MODERN SPECIES 3511 PRDM1 (ENSPCAG00000009179) #22 ATG5 (ENSPCAG00000009237) #23 Tenrec MODERN SPECIES 3801 PRDM1 (ENSETEG00000019669) #22 ATG5 (ENSETEG00000019672) #23 Marsupialia ANCESTRAL SPECIES 2 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Diprotodontia ANCESTRAL SPECIES 15 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Diprotodontia_a ANCESTRAL SPECIES 23 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000018829 #27 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Common wonbat MODERN SPECIES 36 ENSVURG00010007146 CCNC (ENSVURG00010007161) #8 PRDM13 (ENSVURG00010007171) #9 ENSVURG00010007184 MCHR2 (ENSVURG00010007191) #10 SIM1 (ENSVURG00010007204) #11 ASCC3 (ENSVURG00010007236) #13 GRIK2 (ENSVURG00010007436) #15 ENSVURG00010009869 HACE1 (ENSVURG00010009904) #17 LIN28B (ENSVURG00010009956) #18 BVES (ENSVURG00010009971) #19 ENSVURG00010009977 POPDC3 (ENSVURG00010009979) #20 PREP (ENSVURG00010009992) #21 PRDM1 (ENSVURG00010010010) #22 ATG5 (ENSVURG00010010025) #23 CRYBG1 (ENSVURG00010010054) #24 ENSVURG00010010101 RTN4IP1 (ENSVURG00010010119) #25 QRSL1 (ENSVURG00010010151) #26 CD24 (ENSVURG00010010174) #27 MTRES1 (ENSVURG00010010203) #28 BEND3 (ENSVURG00010010224) #29 PDSS2 (ENSVURG00010010278) #30 SOBP (ENSVURG00010010312) #31 SCML4 (ENSVURG00010010328) #32 ENSVURG00010010352 #33 OSTM1 (ENSVURG00010010362) NR2E1 (ENSVURG00010010373) SNX3 (ENSVURG00010010386) koala MODERN SPECIES 305 BVES (ENSPCIG00000019470) #19 POPDC3 (ENSPCIG00000019476) #20 ENSPCIG00000019477 PREP (ENSPCIG00000019479) #21 PRDM1 (ENSPCIG00000015185) #22 ATG5 (ENSPCIG00000015179) #23 QRSL1 (ENSPCIG00000027397) #26 CD24 (ENSPCIG00000000403) #27 ENSPCIG00000032453 #28 Wallaby MODERN SPECIES 5303 PRDM1 (ENSMEUG00000000043) #22 Tasmanian devil MODERN SPECIES 3 COQ3 (ENSSHAG00000011955) PNISR (ENSSHAG00000012240) USP45 (ENSSHAG00000012542) ENSSHAG00000012967 CCNC (ENSSHAG00000013087) #8 PRDM13 (ENSSHAG00000013340) #9 MCHR2 (ENSSHAG00000014523) #10 SIM1 (ENSSHAG00000016220) #11 ASCC3 (ENSSHAG00000016496) #13 GRIK2 (ENSSHAG00000018207) #15 HACE1 (ENSSHAG00000011274) #17 LIN28B (ENSSHAG00000026134) #18 BVES (ENSSHAG00000013121) #19 POPDC3 (ENSSHAG00000013513) #20 PREP (ENSSHAG00000014161) #21 PRDM1 (ENSSHAG00000010080) #22 ATG5 (ENSSHAG00000021331) #23 CRYBG1 (ENSSHAG00000012880) #24 RTN4IP1 (ENSSHAG00000013285) #25 QRSL1 (ENSSHAG00000013597) #26 MTRES1 (ENSSHAG00000015190) #28 BEND3 (ENSSHAG00000015283) #29 PDSS2 (ENSSHAG00000015599) #30 SOBP (ENSSHAG00000029303) #31 SCML4 (ENSSHAG00000017079) #32 SEC63 (ENSSHAG00000017510) #33 OSTM1 (ENSSHAG00000027777) NR2E1 (ENSSHAG00000017854) SNX3 (ENSSHAG00000023627) AFG1L (ENSSHAG00000018044) ENSSHAG00000018299 Opossum MODERN SPECIES 1 PRDM13 (ENSMODG00000018089) #9 MCHR2 (ENSMODG00000018088) #10 SIM1 (ENSMODG00000018087) #11 ASCC3 (ENSMODG00000018082) #13 GRIK2 (ENSMODG00000018065) #15 ENSMODG00000048349 ENSMODG00000040232 HACE1 (ENSMODG00000018036) #17 LIN28B (ENSMODG00000018035) #18 BVES (ENSMODG00000018034) #19 POPDC3 (ENSMODG00000018033) #20 PREP (ENSMODG00000018031) #21 ENSMODG00000023359 ENSMODG00000049471 ENSMODG00000028521 PRDM1 (ENSMODG00000018029) #22 ATG5 (ENSMODG00000018027) #23 CRYBG1 (ENSMODG00000023357) #24 ENSMODG00000050075 RTN4IP1 (ENSMODG00000018024) #25 QRSL1 (ENSMODG00000018023) #26 CD24 (ENSMODG00000049099) #27 ENSMODG00000018021 MTRES1 (ENSMODG00000018020) #28 BEND3 (ENSMODG00000018019) #29 PDSS2 (ENSMODG00000018016) #30 ENSMODG00000029480 SOBP (ENSMODG00000018014) #31 SCML4 (ENSMODG00000018013) #32 ENSMODG00000018012 #33 OSTM1 (ENSMODG00000018010) Platypus MODERN SPECIES 10 FAXC (ENSOANG00000037382) COQ3 (ENSOANG00000042398) PNISR (ENSOANG00000008936) USP45 (ENSOANG00000008938) ENSOANG00000008939 CCNC (ENSOANG00000008940) #8 MCHR2 (ENSOANG00000008942) #10 SIM1 (ENSOANG00000008943) #11 ASCC3 (ENSOANG00000008944) #13 GRIK2 (ENSOANG00000010302) #15 HACE1 (ENSOANG00000010300) #17 ENSOANG00000047568 #18 BVES (ENSOANG00000047336) #19 POPDC3 (ENSOANG00000004179) #20 PREP (ENSOANG00000004177) #21 PRDM1 (ENSOANG00000004176) #22 ATG5 (ENSOANG00000003900) #23 ENSOANG00000003899 #24 RTN4IP1 (ENSOANG00000003898) #25 QRSL1 (ENSOANG00000003897) #26 ENSOANG00000000784 #28 BEND3 (ENSOANG00000050605) #29 PDSS2 (ENSOANG00000000783) #30 SOBP (ENSOANG00000048313) #31 SCML4 (ENSOANG00000036521) #32 SEC63 (ENSOANG00000000777) #33 OSTM1 (ENSOANG00000000776) NR2E1 (ENSOANG00000000775) SNX3 (ENSOANG00000000772) AFG1L (ENSOANG00000000769) ENSOANG00000000768 Sauria ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Archelosauria ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Archosauria ANCESTRAL SPECIES 3 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Aves ANCESTRAL SPECIES 10 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Neognathae ANCESTRAL SPECIES 2 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Galloanserae ANCESTRAL SPECIES 2 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Anatidae ANCESTRAL SPECIES ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Pink-footed goose MODERN SPECIES 43 ENSABRG00000003277 HACE1 (ENSABRG00000003212) #17 LIN28B (ENSABRG00000003182) #18 BVES (ENSABRG00000003118) #19 POPDC3 (ENSABRG00000003098) #20 PREP (ENSABRG00000003068) #21 PRDM1 (ENSABRG00000003008) #22 ATG5 (ENSABRG00000002975) #23 CRYBG1 (ENSABRG00000002822) #24 RTN4IP1 (ENSABRG00000002786) #25 QRSL1 (ENSABRG00000002769) #26 MTRES1 (ENSABRG00000002742) #28 BEND3 (ENSABRG00000002730) #29 PDSS2 (ENSABRG00000002702) #30 SOBP (ENSABRG00000002678) #31 SCML4 (ENSABRG00000002657) #32 SEC63 (ENSABRG00000002590) #33 OSTM1 (ENSABRG00000002574) NR2E1 (ENSABRG00000002549) SNX3 (ENSABRG00000002529) AFG1L (ENSABRG00000002507) ENSABRG00000002494 Duck MODERN SPECIES 21 ENSAPLG00000006518 CCNC (ENSAPLG00000007635) #8 PRDM13 (ENSAPLG00000027679) #9 ENSAPLG00000020003 SIM1 (ENSAPLG00000012534) #11 ASCC3 (ENSAPLG00000012589) #13 ENSAPLG00000031242 ENSAPLG00000012994 #15 ENSAPLG00000029538 #15 ENSAPLG00000022892 HACE1 (ENSAPLG00000006280) #17 LIN28B (ENSAPLG00000019549) #18 BVES (ENSAPLG00000014413) #19 POPDC3 (ENSAPLG00000022652) #20 PREP (ENSAPLG00000014895) #21 PRDM1 (ENSAPLG00000013593) #22 ATG5 (ENSAPLG00000017968) #23 CRYBG1 (ENSAPLG00000008606) #24 RTN4IP1 (ENSAPLG00000009151) #25 QRSL1 (ENSAPLG00000009374) #26 MTRES1 (ENSAPLG00000009523) #28 BEND3 (ENSAPLG00000009545) #29 PDSS2 (ENSAPLG00000009546) #30 SOBP (ENSAPLG00000019216) #31 SCML4 (ENSAPLG00000010070) #32 SEC63 (ENSAPLG00000010176) #33 OSTM1 (ENSAPLG00000010663) ENSAPLG00000021471 AFG1L (ENSAPLG00000011261) ENSAPLG00000011319 ARMC2 (ENSAPLG00000011449) Phasianidae ANCESTRAL SPECIES 3 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Chicken MODERN SPECIES 22 FAXC (ENSGALG00010004345) COQ3 (ENSGALG00010004329) PNISR (ENSGALG00010004306) USP45 (ENSGALG00010004249) ENSGALG00010004240 CCNC (ENSGALG00010004238) #8 PRDM13 (ENSGALG00010004136) #9 SIM1 (ENSGALG00010015160) #11 ASCC3 (ENSGALG00010015140) #13 GRIK2 (ENSGALG00010013006) #15 HACE1 (ENSGALG00010012419) #17 LIN28B (ENSGALG00010013340) #18 BVES (ENSGALG00010015800) #19 POPDC3 (ENSGALG00010013335) #20 PREP (ENSGALG00010013317) #21 PRDM1 (ENSGALG00010013292) #22 ATG5 (ENSGALG00010013247) #23 CRYBG1 (ENSGALG00010013160) #24 RTN4IP1 (ENSGALG00010013076) #25 QRSL1 (ENSGALG00010013016) #26 CD24 (ENSGALG00010012582) C6orf203 (ENSGALG00010012569) #28 BEND3 (ENSGALG00010012529) #29 PDSS2 (ENSGALG00010012466) #30 SOBP (ENSGALG00010012445) #31 SCML4 (ENSGALG00010014550) #32 SEC63 (ENSGALG00010014504) #33 OSTM1 (ENSGALG00010014487) NR2E1 (ENSGALG00010014453) SNX3 (ENSGALG00010014380) AFG1L (ENSGALG00010014346) Turkey MODERN SPECIES 11 LIN28B (ENSMGAG00000013531) #18 BVES (ENSMGAG00000013529) #19 PREP (ENSMGAG00000013527) #21 ENSMGAG00000020588 #32 ENSMGAG00000021606 #32 ENSMGAG00000013512 #31 PDSS2 (ENSMGAG00000013514) #30 ENSMGAG00000013517 #28 ENSMGAG00000013515 #29 QRSL1 (ENSMGAG00000013518) #26 ENSMGAG00000022679 #25 ENSMGAG00000018204 #24 ENSMGAG00000013519 #25 ENSMGAG00000013520 #24 ENSMGAG00000013523 #23 ENSMGAG00000013524 #22 OSTM1 (ENSMGAG00000013498) NR2E1 (ENSMGAG00000013495) SNX3 (ENSMGAG00000013494) AFG1L (ENSMGAG00000013490) ENSMGAG00000013379 ENSMGAG00000018692 ENSMGAG00000013384 CALHM5 (ENSMGAG00000019395) ENSMGAG00000013381 ENSMGAG00000013380 ENSMGAG00000013385 ENSMGAG00000013382 ENSMGAG00000013387 ENSMGAG00000022386 ENSMGAG00000013388 Japanese quail MODERN SPECIES 21 FAXC (ENSCJPG00005000089) COQ3 (ENSCJPG00005000085) PNISR (ENSCJPG00005000077) USP45 (ENSCJPG00005000057) ENSCJPG00005009480 CCNC (ENSCJPG00005009478) #8 PRDM13 (ENSCJPG00005009475) #9 SIM1 (ENSCJPG00005009469) #11 ASCC3 (ENSCJPG00005009467) #13 GRIK2 (ENSCJPG00005009466) #15 HACE1 (ENSCJPG00005009458) #17 LIN28B (ENSCJPG00005009457) #18 BVES (ENSCJPG00005009456) #19 POPDC3 (ENSCJPG00005009455) #20 PREP (ENSCJPG00005009454) #21 PRDM1 (ENSCJPG00005009449) #22 ATG5 (ENSCJPG00005009448) #23 CRYBG1 (ENSCJPG00005009445) #24 RTN4IP1 (ENSCJPG00005009443) #25 QRSL1 (ENSCJPG00005009439) #26 MTRES1 (ENSCJPG00005009436) #28 BEND3 (ENSCJPG00005009435) #29 PDSS2 (ENSCJPG00005009434) #30 ENSCJPG00005009433 SOBP (ENSCJPG00005009431) #31 SCML4 (ENSCJPG00005009429) #32 SEC63 (ENSCJPG00005009426) #33 NR2E1 (ENSCJPG00005009425) SNX3 (ENSCJPG00005009424) AFG1L (ENSCJPG00005009422) ENSCJPG00005009420 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00950000182919.A ENSGT00390000007284 ENSGT01060000248664 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Golden eagle MODERN SPECIES 11 FAXC (ENSACCG00020007694) COQ3 (ENSACCG00020007685) ENSACCG00020007669 USP45 (ENSACCG00020007646) ENSACCG00020007628 CCNC (ENSACCG00020007612) #8 PRDM13 (ENSACCG00020007603) #9 SIM1 (ENSACCG00020007595) #11 ASCC3 (ENSACCG00020007539) #13 GRIK2 (ENSACCG00020007485) #15 HACE1 (ENSACCG00020007438) #17 LIN28B (ENSACCG00020007419) #18 BVES (ENSACCG00020007400) #19 POPDC3 (ENSACCG00020007382) #20 PREP (ENSACCG00020007365) #21 PRDM1 (ENSACCG00020007354) #22 ATG5 (ENSACCG00020007338) #23 CRYBG1 (ENSACCG00020007223) #24 RTN4IP1 (ENSACCG00020007099) #25 QRSL1 (ENSACCG00020007083) #26 MTRES1 (ENSACCG00020007067) #28 BEND3 (ENSACCG00020007047) #29 PDSS2 (ENSACCG00020007038) #30 SOBP (ENSACCG00020007022) #31 ENSACCG00020007009 #32 ENSACCG00020006999 #32 SEC63 (ENSACCG00020006981) #33 OSTM1 (ENSACCG00020006965) NR2E1 (ENSACCG00020006946) SNX3 (ENSACCG00020006910) AFG1L (ENSACCG00020006893) Kakapo MODERN SPECIES 23 ENSSHBG00005008530 COQ3 (ENSSHBG00005008518) PNISR (ENSSHBG00005008511) USP45 (ENSSHBG00005008502) ENSSHBG00005008496 CCNC (ENSSHBG00005008489) #8 PRDM13 (ENSSHBG00005008480) #9 SIM1 (ENSSHBG00005008456) #11 ASCC3 (ENSSHBG00005007565) #13 GRIK2 (ENSSHBG00005007267) #15 HACE1 (ENSSHBG00005007193) #17 LIN28B (ENSSHBG00005007139) #18 BVES (ENSSHBG00005007052) #19 POPDC3 (ENSSHBG00005007036) #20 PREP (ENSSHBG00005007018) #21 PRDM1 (ENSSHBG00005006993) #22 ATG5 (ENSSHBG00005006968) #23 CRYBG1 (ENSSHBG00005006932) #24 RTN4IP1 (ENSSHBG00005006887) #25 QRSL1 (ENSSHBG00005006858) #26 MTRES1 (ENSSHBG00005006842) #28 BEND3 (ENSSHBG00005006817) #29 PDSS2 (ENSSHBG00005006788) #30 SOBP (ENSSHBG00005006768) #31 SCML4 (ENSSHBG00005006744) #32 SEC63 (ENSSHBG00005006731) #33 OSTM1 (ENSSHBG00005006714) NR2E1 (ENSSHBG00005006698) SNX3 (ENSSHBG00005006685) AFG1L (ENSSHBG00005006641) ENSSHBG00005000424 Passeriformes ANCESTRAL SPECIES 2 ENSGT00950000182919.A ENSGT00390000007284 ENSGT01060000248664 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00960000191023 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00950000182919.A ENSGT00390000007284 ENSGT01060000248664 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00960000191023 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00950000182919.A ENSGT00390000007284 ENSGT01060000248664 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00960000191023 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Passeroidea ANCESTRAL SPECIES ENSGT00950000182919.A ENSGT00390000007284 ENSGT01060000248664 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Common canary MODERN SPECIES 1 FBXL4 (ENSSCAG00000001276) FAXC (ENSSCAG00000001258) COQ3 (ENSSCAG00000001250) ENSSCAG00000001235 USP45 (ENSSCAG00000001208) ENSSCAG00000001191 CCNC (ENSSCAG00000001173) #8 SIM1 (ENSSCAG00000001136) #11 ASCC3 (ENSSCAG00000001112) #13 GRIK2 (ENSSCAG00000001013) #15 HACE1 (ENSSCAG00000000966) #17 LIN28B (ENSSCAG00000000914) #18 BVES (ENSSCAG00000000898) #19 POPDC3 (ENSSCAG00000000884) #20 PREP (ENSSCAG00000000866) #21 PRDM1 (ENSSCAG00000000801) #22 ATG5 (ENSSCAG00000000793) #23 CRYBG1 (ENSSCAG00000000675) #24 RTN4IP1 (ENSSCAG00000000647) #25 QRSL1 (ENSSCAG00000000635) #26 MTRES1 (ENSSCAG00000000620) #28 BEND3 (ENSSCAG00000000615) #29 PDSS2 (ENSSCAG00000000586) #30 SOBP (ENSSCAG00000000565) #31 ENSSCAG00000000536 #32 SCML4 (ENSSCAG00000000531) #32 SEC63 (ENSSCAG00000000504) #33 OSTM1 (ENSSCAG00000000492) NR2E1 (ENSSCAG00000000484) SNX3 (ENSSCAG00000000476) AFG1L (ENSSCAG00000000396) Zebra finch MODERN SPECIES 23 FAXC (ENSTGUG00000012293) COQ3 (ENSTGUG00000012290) ENSTGUG00000012289 USP45 (ENSTGUG00000012285) ENSTGUG00000012283 CCNC (ENSTGUG00000012282) #8 PRDM13 (ENSTGUG00000012280) #9 SIM1 (ENSTGUG00000012278) #11 ASCC3 (ENSTGUG00000012262) #13 GRIK2 (ENSTGUG00000012240) #15 HACE1 (ENSTGUG00000012227) #17 LIN28B (ENSTGUG00000029445) #18 BVES (ENSTGUG00000012218) #19 POPDC3 (ENSTGUG00000029737) #20 PREP (ENSTGUG00000012206) #21 PRDM1 (ENSTGUG00000012204) #22 ATG5 (ENSTGUG00000012200) #23 CRYBG1 (ENSTGUG00000012192) #24 RTN4IP1 (ENSTGUG00000012187) #25 QRSL1 (ENSTGUG00000012180) #26 MTRES1 (ENSTGUG00000012177) #28 BEND3 (ENSTGUG00000012175) #29 PDSS2 (ENSTGUG00000012168) #30 SOBP (ENSTGUG00000012167) #31 ENSTGUG00000027856 #32 ENSTGUG00000012164 #32 SEC63 (ENSTGUG00000012155) #33 OSTM1 (ENSTGUG00000012154) SNX3 (ENSTGUG00000012141) NR2E1 (ENSTGUG00000012147) AFG1L (ENSTGUG00000012136) Medium ground finch MODERN SPECIES 120 GRIK2 (ENSGFOG00000003635) #15 HACE1 (ENSGFOG00000003561) #17 LIN28B (ENSGFOG00000003550) #18 BVES (ENSGFOG00000003528) #19 POPDC3 (ENSGFOG00000003522) #20 PREP (ENSGFOG00000003505) #21 PRDM1 (ENSGFOG00000003493) #22 ATG5 (ENSGFOG00000003471) #23 CRYBG1 (ENSGFOG00000003388) #24 RTN4IP1 (ENSGFOG00000003362) #25 QRSL1 (ENSGFOG00000003330) #26 MTRES1 (ENSGFOG00000003320) #28 Flycatcher MODERN SPECIES 21 ENSFALG00000022998 COQ3 (ENSFALG00000024544) ENSFALG00000026665 USP45 (ENSFALG00000009614) ENSFALG00000022920 CCNC (ENSFALG00000026662) #8 PRDM13 (ENSFALG00000025976) #9 SIM1 (ENSFALG00000009592) #11 ASCC3 (ENSFALG00000005260) #13 GRIK2 (ENSFALG00000005281) #15 HACE1 (ENSFALG00000011548) #17 LIN28B (ENSFALG00000023138) #18 BVES (ENSFALG00000011583) #19 POPDC3 (ENSFALG00000011603) #20 PREP (ENSFALG00000011608) #21 PRDM1 (ENSFALG00000011624) #22 ATG5 (ENSFALG00000011631) #23 CRYBG1 (ENSFALG00000028843) #24 RTN4IP1 (ENSFALG00000027502) #25 QRSL1 (ENSFALG00000011682) #26 MTRES1 (ENSFALG00000011688) #28 PDSS2 (ENSFALG00000024360) #30 SOBP (ENSFALG00000011712) #31 SCML4 (ENSFALG00000011729) #32 SEC63 (ENSFALG00000011739) #33 OSTM1 (ENSFALG00000027733) NR2E1 (ENSFALG00000027672) SNX3 (ENSFALG00000011775) AFG1L (ENSFALG00000028584) ENSFALG00000025540 ARMC2 (ENSFALG00000011800) Great tit MODERN SPECIES 22 FAXC (ENSPMJG00000000817) COQ3 (ENSPMJG00000000809) ENSPMJG00000000801 USP45 (ENSPMJG00000000786) ENSPMJG00000000782 CCNC (ENSPMJG00000000772) #8 PRDM13 (ENSPMJG00000000769) #9 SIM1 (ENSPMJG00000000702) #11 ASCC3 (ENSPMJG00000000583) #13 GRIK2 (ENSPMJG00000000444) #15 HACE1 (ENSPMJG00000000330) #17 LIN28B (ENSPMJG00000000304) #18 BVES (ENSPMJG00000000259) #19 POPDC3 (ENSPMJG00000000231) #20 PREP (ENSPMJG00000000193) #21 PRDM1 (ENSPMJG00000000106) #22 ATG5 (ENSPMJG00000000069) #23 CRYBG1 (ENSPMJG00000015334) #24 RTN4IP1 (ENSPMJG00000015333) #25 QRSL1 (ENSPMJG00000015332) #26 MTRES1 (ENSPMJG00000015329) #28 BEND3 (ENSPMJG00000015328) #29 PDSS2 (ENSPMJG00000015327) #30 SOBP (ENSPMJG00000015326) #31 ENSPMJG00000015325 ENSPMJG00000015324 #32 ENSPMJG00000015323 #32 SEC63 (ENSPMJG00000015322) #33 ENSPMJG00000015321 OSTM1 (ENSPMJG00000015320) NR2E1 (ENSPMJG00000015318) African ostrich MODERN SPECIES 685 ENSSCUG00000008750 #15 HACE1 (ENSSCUG00000008760) #17 LIN28B (ENSSCUG00000008767) #18 BVES (ENSSCUG00000008772) #19 POPDC3 (ENSSCUG00000008774) #20 PREP (ENSSCUG00000008776) #21 PRDM1 (ENSSCUG00000008787) #22 ATG5 (ENSSCUG00000008790) #23 CRYBG1 (ENSSCUG00000008797) #24 RTN4IP1 (ENSSCUG00000008804) #25 QRSL1 (ENSSCUG00000008810) #26 MTRES1 (ENSSCUG00000008816) #28 BEND3 (ENSSCUG00000008817) #29 PDSS2 (ENSSCUG00000008819) #30 SOBP (ENSSCUG00000008820) #31 SCML4 (ENSSCUG00000008824) #32 SEC63 (ENSSCUG00000008829) #33 ENSSCUG00000008831 OSTM1 (ENSSCUG00000008834) NR2E1 (ENSSCUG00000008835) SNX3 (ENSSCUG00000008837) AFG1L (ENSSCUG00000008839) Australian saltwater crocodile MODERN SPECIES 38 COQ3 (ENSCPRG00005000207) PNISR (ENSCPRG00005000239) USP45 (ENSCPRG00005000289) ENSCPRG00005000301 CCNC (ENSCPRG00005000316) #8 MCHR2 (ENSCPRG00005000415) #10 SIM1 (ENSCPRG00005000466) #11 ASCC3 (ENSCPRG00005000542) #13 GRIK2 (ENSCPRG00005000722) #15 HACE1 (ENSCPRG00005000946) #17 ENSCPRG00005000982 LIN28B (ENSCPRG00005001009) #18 BVES (ENSCPRG00005001021) #19 POPDC3 (ENSCPRG00005001029) #20 PREP (ENSCPRG00005001045) #21 PRDM1 (ENSCPRG00005001075) #22 ATG5 (ENSCPRG00005001095) #23 CRYBG1 (ENSCPRG00005001130) #24 RTN4IP1 (ENSCPRG00005001145) #25 QRSL1 (ENSCPRG00005001174) #26 MTRES1 (ENSCPRG00005001199) #28 BEND3 (ENSCPRG00005001204) #29 PDSS2 (ENSCPRG00005001243) #30 SOBP (ENSCPRG00005001260) #31 SCML4 (ENSCPRG00005001262) #32 SEC63 (ENSCPRG00005001290) #33 ENSCPRG00005001317 OSTM1 (ENSCPRG00005001321) NR2E1 (ENSCPRG00005001409) SNX3 (ENSCPRG00005001413) AFG1L (ENSCPRG00005001415) Cryptodira ANCESTRAL SPECIES 1 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719.l ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Emydidae ANCESTRAL SPECIES 8 ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719.l ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 painted turtle MODERN SPECIES 2422 PASK (ENSCPBG00000003758) ENSCPBG00000003781 CCNC (ENSCPBG00000003793) #8 PRDM13 (ENSCPBG00000003808) #9 MCHR2 (ENSCPBG00000003828) #10 SIM1 (ENSCPBG00000003844) #11 ASCC3 (ENSCPBG00000003881) #13 GRIK2 (ENSCPBG00000003946) #15 ENSCPBG00000003981 ENSCPBG00000003987 HACE1 (ENSCPBG00000004045) #17 LIN28B (ENSCPBG00000004104) #18 BVES (ENSCPBG00000004119) #19 POPDC3 (ENSCPBG00000004134) #20 PREP (ENSCPBG00000004147) #21 PRDM1 (ENSCPBG00000004165) #22 ATG5 (ENSCPBG00000004179) #23 CRYBG1 (ENSCPBG00000004238) #24 RTN4IP1 (ENSCPBG00000006136) #25 QRSL1 (ENSCPBG00000006147) #26 MTRES1 (ENSCPBG00000006157) #28 BEND3 (ENSCPBG00000006167) #29 PDSS2 (ENSCPBG00000006170) #30 SOBP (ENSCPBG00000006184) #31 SCML4 (ENSCPBG00000006199) #32 SEC63 (ENSCPBG00000006213) #33 ENSCPBG00000006227 OSTM1 (ENSCPBG00000006232) ENSCPBG00000006236 NR2E1 (ENSCPBG00000006262) SNX3 (ENSCPBG00000006271) Three-toed box turtle MODERN SPECIES 15 COQ3 (ENSTMTG00000002247) PNISR (ENSTMTG00000002242) USP45 (ENSTMTG00000002207) ENSTMTG00000002198 CCNC (ENSTMTG00000002189) #8 PRDM13 (ENSTMTG00000002183) #9 MCHR2 (ENSTMTG00000002173) #10 SIM1 (ENSTMTG00000002156) #11 ASCC3 (ENSTMTG00000001886) #13 GRIK2 (ENSTMTG00000001374) #15 HACE1 (ENSTMTG00000001261) #17 LIN28B (ENSTMTG00000001243) #18 BVES (ENSTMTG00000001231) #19 POPDC3 (ENSTMTG00000001226) #20 PREP (ENSTMTG00000001210) #21 PRDM1 (ENSTMTG00000001194) #22 ATG5 (ENSTMTG00000001175) #23 CRYBG1 (ENSTMTG00000001144) #24 RTN4IP1 (ENSTMTG00000001116) #25 QRSL1 (ENSTMTG00000001095) #26 MTRES1 (ENSTMTG00000001088) #28 ENSTMTG00000001079 BEND3 (ENSTMTG00000001065) #29 PDSS2 (ENSTMTG00000001055) #30 SOBP (ENSTMTG00000001041) #31 ENSTMTG00000001027 #32 ENSTMTG00000001019 #32 ENSTMTG00000001014 SEC63 (ENSTMTG00000000995) #33 OSTM1 (ENSTMTG00000000985) NR2E1 (ENSTMTG00000000962) Testudinidae ANCESTRAL SPECIES 10 ENSGT00730000111138 ENSGT00940000157719.k ENSGT00940000157719.l ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Goode s thornscrub tortoise MODERN SPECIES 17 PNISR (ENSGEVG00005003075) USP45 (ENSGEVG00005003090) ENSGEVG00005003119 CCNC (ENSGEVG00005003129) #8 PRDM13 (ENSGEVG00005003148) #9 MCHR2 (ENSGEVG00005003158) #10 SIM1 (ENSGEVG00005003172) #11 ASCC3 (ENSGEVG00005003199) #13 GRIK2 (ENSGEVG00005003385) #15 ENSGEVG00005003633 HACE1 (ENSGEVG00005003662) #17 LIN28B (ENSGEVG00005003726) #18 BVES (ENSGEVG00005003745) #19 POPDC3 (ENSGEVG00005003754) #20 PREP (ENSGEVG00005003770) #21 PRDM1 (ENSGEVG00005003790) #22 ATG5 (ENSGEVG00005009020) #23 CRYBG1 (ENSGEVG00005009083) #24 RTN4IP1 (ENSGEVG00005009393) #25 QRSL1 (ENSGEVG00005009425) #26 MTRES1 (ENSGEVG00005009472) #28 BEND3 (ENSGEVG00005009513) #29 PDSS2 (ENSGEVG00005009557) #30 SOBP (ENSGEVG00005009603) #31 ENSGEVG00005009696 #32 ENSGEVG00005009741 #32 SEC63 (ENSGEVG00005009790) #33 ENSGEVG00005009841 OSTM1 (ENSGEVG00005009859) NR2E1 (ENSGEVG00005009891) SNX3 (ENSGEVG00005009991) Abingdon island giant tortoise MODERN SPECIES 960 HACE1 (ENSCABG00000006618) #17 LIN28B (ENSCABG00000007359) #18 BVES (ENSCABG00000007361) #19 POPDC3 (ENSCABG00000007362) #20 PREP (ENSCABG00000007366) #21 ENSCABG00000007376 ENSCABG00000007378 PRDM1 (ENSCABG00000007382) #22 ATG5 (ENSCABG00000007392) #23 ENSCABG00000007393 #24 RTN4IP1 (ENSCABG00000007399) #25 QRSL1 (ENSCABG00000007404) #26 Chinese turtle MODERN SPECIES 717 PNISR (ENSPSIG00000002547) USP45 (ENSPSIG00000002556) ENSPSIG00000002560 CCNC (ENSPSIG00000002562) #8 ENSPSIG00000001440 PRDM13 (ENSPSIG00000002567) #9 MCHR2 (ENSPSIG00000002570) #10 SIM1 (ENSPSIG00000002579) #11 ENSPSIG00000002620 #13 ENSPSIG00000002623 #13 GRIK2 (ENSPSIG00000002627) #15 HACE1 (ENSPSIG00000002633) #17 LIN28B (ENSPSIG00000002635) #18 BVES (ENSPSIG00000002639) #19 PREP (ENSPSIG00000002644) #21 PRDM1 (ENSPSIG00000002661) #22 ATG5 (ENSPSIG00000002664) #23 ENSPSIG00000002700 #24 Lepidosauria ANCESTRAL SPECIES ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Episquamata ANCESTRAL SPECIES ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Toxicofera ANCESTRAL SPECIES ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Elapidae ANCESTRAL SPECIES ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a Indian cobra MODERN SPECIES FAXC (ENSNNAG00000002571) COQ3 (ENSNNAG00000002557) PNISR (ENSNNAG00000002535) USP45 (ENSNNAG00000002498) ENSNNAG00000002486 CCNC (ENSNNAG00000002473) #8 PRDM13 (ENSNNAG00000002464) #9 SIM1 (ENSNNAG00000002455) #11 ASCC3 (ENSNNAG00000002415) #13 GRIK2 (ENSNNAG00000002042) #15 HACE1 (ENSNNAG00000001627) #17 LIN28B (ENSNNAG00000001614) #18 BVES (ENSNNAG00000001601) #19 POPDC3 (ENSNNAG00000001593) #20 PREP (ENSNNAG00000001576) #21 PRDM1 (ENSNNAG00000001559) #22 ATG5 (ENSNNAG00000001541) #23 CRYBG1 (ENSNNAG00000001368) #24 RTN4IP1 (ENSNNAG00000001272) #25 QRSL1 (ENSNNAG00000001246) #26 ENSNNAG00000001237 MTRES1 (ENSNNAG00000001224) #28 BEND3 (ENSNNAG00000001219) #29 PDSS2 (ENSNNAG00000001202) #30 SOBP (ENSNNAG00000001188) #31 SCML4 (ENSNNAG00000001175) #32 SEC63 (ENSNNAG00000001110) #33 OSTM1 (ENSNNAG00000001068) NR2E1 (ENSNNAG00000001048) SNX3 (ENSNNAG00000001033) AFG1L (ENSNNAG00000001013) Elapidae_a ANCESTRAL SPECIES 6 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719.m ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.g #25 ENSGT00880000138028.b.b.h #25 ENSGT00550000074866.b #26 ENSGT00550000074866.a #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719.m ENSGT00940000164601 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b.g #25 ENSGT00880000138028.b.b.h #25 ENSGT00550000074866.b #26 ENSGT00960000190953 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b Mainland tiger snake MODERN SPECIES 16 FAXC (ENSNSUG00000017879) COQ3 (ENSNSUG00000017880) PNISR (ENSNSUG00000017881) USP45 (ENSNSUG00000017882) ENSNSUG00000017883 CCNC (ENSNSUG00000017884) #8 PRDM13 (ENSNSUG00000017902) #9 SIM1 (ENSNSUG00000017903) #11 ASCC3 (ENSNSUG00000017904) #13 GRIK2 (ENSNSUG00000017907) #15 HACE1 (ENSNSUG00000017909) #17 LIN28B (ENSNSUG00000017911) #18 BVES (ENSNSUG00000017912) #19 POPDC3 (ENSNSUG00000017913) #20 PREP (ENSNSUG00000017917) #21 PRDM1 (ENSNSUG00000018069) #22 ATG5 (ENSNSUG00000018071) #23 CRYBG1 (ENSNSUG00000018073) #24 ENSNSUG00000018090 #25 ENSNSUG00000018092 #25 QRSL1 (ENSNSUG00000018093) #26 ENSNSUG00000018094 MTRES1 (ENSNSUG00000018096) #28 BEND3 (ENSNSUG00000018097) #29 PDSS2 (ENSNSUG00000018098) #30 SOBP (ENSNSUG00000018101) #31 ENSNSUG00000018102 #32 SCML4 (ENSNSUG00000018103) #32 SEC63 (ENSNSUG00000018107) #33 OSTM1 (ENSNSUG00000018246) NR2E1 (ENSNSUG00000018247) Eastern brown snake MODERN SPECIES 4 COQ3 (ENSPTXG00000007696) PNISR (ENSPTXG00000007694) USP45 (ENSPTXG00000007692) ENSPTXG00000007690 CCNC (ENSPTXG00000007689) #8 PRDM13 (ENSPTXG00000007686) #9 SIM1 (ENSPTXG00000007685) #11 ASCC3 (ENSPTXG00000007623) #13 ENSPTXG00000007616 GRIK2 (ENSPTXG00000006929) #15 HACE1 (ENSPTXG00000006917) #17 LIN28B (ENSPTXG00000006916) #18 BVES (ENSPTXG00000006915) #19 POPDC3 (ENSPTXG00000006914) #20 PREP (ENSPTXG00000006913) #21 PRDM1 (ENSPTXG00000006912) #22 ATG5 (ENSPTXG00000006911) #23 CRYBG1 (ENSPTXG00000006909) #24 RTN4IP1 (ENSPTXG00000006908) #25 ENSPTXG00000006907 #26 ENSPTXG00000006906 #26 ENSPTXG00000006905 MTRES1 (ENSPTXG00000006904) #28 BEND3 (ENSPTXG00000006903) #29 PDSS2 (ENSPTXG00000006900) #30 SOBP (ENSPTXG00000006898) #31 ENSPTXG00000006897 #32 SCML4 (ENSPTXG00000006896) #32 SEC63 (ENSPTXG00000006895) #33 OSTM1 (ENSPTXG00000006893) NR2E1 (ENSPTXG00000006891) Blue-lipped sea krait MODERN SPECIES 7919 PRDM1 (ENSLLTG00000004005) #22 Lizard MODERN SPECIES ENSACAG00000012457 COL10A1 (ENSACAG00000012503) FRK (ENSACAG00000012316) ENSACAG00000044190 ENSACAG00000025602 ENSACAG00000025786 ENSACAG00000028800 HS3ST5 (ENSACAG00000012310) ENSACAG00000045149 ENSACAG00000037660 HDAC2 (ENSACAG00000012174) MARCKS (ENSACAG00000012165) ENSACAG00000037386 ENSACAG00000041330 ENSACAG00000039863 PRDM1 (ENSACAG00000005496) #22 ATG5 (ENSACAG00000005534) #23 CRYBG1 (ENSACAG00000005581) #24 RTN4IP1 (ENSACAG00000005683) #25 QRSL1 (ENSACAG00000005718) #26 ENSACAG00000040537 MTRES1 (ENSACAG00000005757) #28 BEND3 (ENSACAG00000005763) #29 ENSACAG00000035942 SOBP (ENSACAG00000005784) #31 ENSACAG00000035715 SCML4 (ENSACAG00000005791) #32 SEC63 (ENSACAG00000005829) #33 OSTM1 (ENSACAG00000029292) NR2E1 (ENSACAG00000005957) SNX3 (ENSACAG00000006006) Laterata ANCESTRAL SPECIES 4 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000160200 #9 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Common wall lizard MODERN SPECIES 11 USP45 (ENSPMRG00000007604) ENSPMRG00000007610 CCNC (ENSPMRG00000007622) #8 PRDM13 (ENSPMRG00000007672) #9 ENSPMRG00000007677 ENSPMRG00000007681 SIM1 (ENSPMRG00000007689) #11 ASCC3 (ENSPMRG00000007709) #13 GRIK2 (ENSPMRG00000007778) #15 ENSPMRG00000007826 LIN28B (ENSPMRG00000007830) #18 BVES (ENSPMRG00000007832) #19 POPDC3 (ENSPMRG00000002395) #20 PREP (ENSPMRG00000002400) #21 ENSPMRG00000002413 PRDM1 (ENSPMRG00000002419) #22 ATG5 (ENSPMRG00000002433) #23 CRYBG1 (ENSPMRG00000002468) #24 RTN4IP1 (ENSPMRG00000002681) #25 QRSL1 (ENSPMRG00000002712) #26 ENSPMRG00000002726 #28 BEND3 (ENSPMRG00000002730) #29 PDSS2 (ENSPMRG00000002734) #30 SOBP (ENSPMRG00000002743) #31 SCML4 (ENSPMRG00000002753) #32 SEC63 (ENSPMRG00000002784) #33 OSTM1 (ENSPMRG00000002840) NR2E1 (ENSPMRG00000002845) SNX3 (ENSPMRG00000002854) AFG1L (ENSPMRG00000002870) ENSPMRG00000002895 Argentine black and white tegu MODERN SPECIES 2 COQ3 (ENSSMRG00000013355) PNISR (ENSSMRG00000013354) USP45 (ENSSMRG00000013353) ENSSMRG00000013352 CCNC (ENSSMRG00000013351) #8 PRDM13 (ENSSMRG00000013350) #9 SIM1 (ENSSMRG00000013349) #11 ASCC3 (ENSSMRG00000013348) #13 GRIK2 (ENSSMRG00000013342) #15 ENSSMRG00000013339 HACE1 (ENSSMRG00000013337) #17 LIN28B (ENSSMRG00000013336) #18 BVES (ENSSMRG00000013335) #19 POPDC3 (ENSSMRG00000013334) #20 PREP (ENSSMRG00000013333) #21 PRDM1 (ENSSMRG00000013332) #22 ATG5 (ENSSMRG00000013331) #23 CRYBG1 (ENSSMRG00000013325) #24 RTN4IP1 (ENSSMRG00000013323) #25 QRSL1 (ENSSMRG00000013322) #26 MTRES1 (ENSSMRG00000013320) #28 BEND3 (ENSSMRG00000013319) #29 PDSS2 (ENSSMRG00000013317) #30 SOBP (ENSSMRG00000013316) #31 SCML4 (ENSSMRG00000013314) #32 SEC63 (ENSSMRG00000013310) #33 OSTM1 (ENSSMRG00000013307) NR2E1 (ENSSMRG00000013306) SNX3 (ENSSMRG00000013304) AFG1L (ENSSMRG00000013302) ENSSMRG00000013298 tuatara MODERN SPECIES 781 PRDM1 (ENSSPUG00000007628) #22 ATG5 (ENSSPUG00000007600) #23 CRYBG1 (ENSSPUG00000007257) #24 ENSSPUG00000007175 #25 ENSSPUG00000007163 #25 QRSL1 (ENSSPUG00000007158) #26 ENSSPUG00000007149 MTRES1 (ENSSPUG00000007141) #28 PDSS2 (ENSSPUG00000007117) #30 ENSSPUG00000007098 #32 ENSSPUG00000007093 #32 SEC63 (ENSSPUG00000007035) #33 OSTM1 (ENSSPUG00000007022) NR2E1 (ENSSPUG00000007007) SNX3 (ENSSPUG00000006997) AFG1L (ENSSPUG00000006972) Anura ANCESTRAL SPECIES 8 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 #8 ENSGT00940000164536 ENSGT00940000160200 #9 ENSGT00940000154272.A #10 ENSGT00940000156143 #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155695 #24 ENSGT00880000138028.b.b #25 ENSGT00550000074866 #26 ENSGT00390000009366 #28 ENSGT00390000010827 #29 ENSGT00940000153498.B.b #30 ENSGT00940000154164.c #31 ENSGT00940000157463 #32 ENSGT00390000001965 #33 ENSGT00390000012341 ENSGT00940000156693 ENSGT00940000153609.b ENSGT00390000013227.a.a ENSGT00940000159826 Frog MODERN SPECIES 5 mchr2 (ENSXETG00000029969) #10 sim1 (ENSXETG00000002406) #11 ascc3 (ENSXETG00000032212) #13 ENSXETG00000038932 grik2 (ENSXETG00000013277) #15 ENSXETG00000042621 ENSXETG00000042826 ENSXETG00000044223 ENSXETG00000042615 hace1 (ENSXETG00000013282) #17 lin28b (ENSXETG00000035037) #18 ENSXETG00000047073 bves (ENSXETG00000013301) #19 prep (ENSXETG00000013305) #21 ENSXETG00000049046 prdm1 (ENSXETG00000008674) #22 atg5 (ENSXETG00000008672) #23 ENSXETG00000047416 crybg1 (ENSXETG00000019268) #24 rtn4ip1 (ENSXETG00000019269) #25 qrsl1 (ENSXETG00000027717) #26 ENSXETG00000042232 mtres1 (ENSXETG00000019267) #28 pdss2 (ENSXETG00000019263) #29 sobp (ENSXETG00000019261) #31 scml4 (ENSXETG00000014864) #32 sec63 (ENSXETG00000014863) #33 ostm1 (ENSXETG00000040905) nr2e1 (ENSXETG00000014853) snx3 (ENSXETG00000024393) afg1l (ENSXETG00000032496) Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000019490 SIM1 (ENSLLEG00000019320) #11 ASCC3 (ENSLLEG00000019022) #13 ENSLLEG00000018981 GRIK2 (ENSLLEG00000018681) #15 ENSLLEG00000018642 ENSLLEG00000018622 HACE1 (ENSLLEG00000017141) #17 ENSLLEG00000017051 LIN28B (ENSLLEG00000016986) #18 ENSLLEG00000016881 POPDC3 (ENSLLEG00000016822) #20 BVES (ENSLLEG00000016474) #19 ENSLLEG00000016433 PREP (ENSLLEG00000016113) #21 PRDM1 (ENSLLEG00000016024) #22 ATG5 (ENSLLEG00000015928) #23 ENSLLEG00000015884 CRYBG1 (ENSLLEG00000015541) #24 RTN4IP1 (ENSLLEG00000015388) #25 ENSLLEG00000015371 QRSL1 (ENSLLEG00000014906) #26 BEND3 (ENSLLEG00000014794) #29 PDSS2 (ENSLLEG00000014579) #30 SOBP (ENSLLEG00000027910) #31 ENSLLEG00000027857 SCML4 (ENSLLEG00000027770) #32 ENSLLEG00000027733 SESN1 (ENSLLEG00000027639) ENSLLEG00000027615 ARMC2 (ENSLLEG00000027469) Coelacanth MODERN SPECIES 641 BVES (ENSLACG00000000555) #19 PREP (ENSLACG00000003474) #21 ENSLACG00000009432 ENSLACG00000010410 ENSLACG00000022375 #22 ATG5 (ENSLACG00000013228) #23 ENSLACG00000014846 ENSLACG00000015280 RTN4IP1 (ENSLACG00000015583) #25 QRSL1 (ENSLACG00000015858) #26 Actinopterygii ANCESTRAL SPECIES 216 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT00390000013853 ENSGT00940000155695 #24 ENSGT00390000009631 ENSGT00650000093438 ENSGT00940000155536 ENSGT00940000156143.a.b #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Reedfish MODERN SPECIES 11 mtres1 (ENSECRG00000001319) #28 rtn4ip1 (ENSECRG00000001347) #25 ENSECRG00000001379 #24 CEP162 (ENSECRG00000001445) mrap2a (ENSECRG00000001507) CYB5R4 (ENSECRG00000001521) sim1a (ENSECRG00000001559) #11 ASCC3 (ENSECRG00000001635) #13 GRIK2 (ENSECRG00000001851) #15 ENSECRG00000001886 HACE1 (ENSECRG00000001907) #17 lin28b (ENSECRG00000001972) #18 bves (ENSECRG00000002028) #19 popdc3 (ENSECRG00000002057) #20 prep (ENSECRG00000002083) #21 prdm1a (ENSECRG00000002117) #22 atg5 (ENSECRG00000002133) #23 ENSECRG00000002152 ENSECRG00000002162 ENSECRG00000002173 ube3d (ENSECRG00000002194) ENSECRG00000002209 tpbgb (ENSECRG00000002220) IBTK (ENSECRG00000002235) tent5ab (ENSECRG00000002265) bckdhb (ENSECRG00000002292) ttk (ENSECRG00000002360) elovl4b (ENSECRG00000002398) SOGA3 (ENSECRG00000002417) ENSECRG00000002433 ECHDC1 (ENSECRG00000002449) Neopterygii ANCESTRAL SPECIES 5 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00940000155695 #24 ENSGT00390000009631 ENSGT00650000093438 ENSGT00940000155536 ENSGT00940000156143.a.b #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155141.w.b ENSGT00510000047616.b ENSGT00940000165475 ENSGT00390000018131 ENSGT01030000234912 ENSGT00940000157815 ENSGT00390000000358 ENSGT00880000138038 ENSGT00390000001962 ENSGT00950000182982.C ENSGT00940000169423.a ENSGT01050000244838.D ENSGT00950000182984.a ENSGT00940000156533 Osteoglossocephalai ANCESTRAL SPECIES 61 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT00390000009631 ENSGT00650000093438 ENSGT00940000155536 ENSGT00940000156143.a.a #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000155141.w.b ENSGT00510000047616.b ENSGT00940000165475 ENSGT00390000018131 ENSGT01030000234912 ENSGT00940000157815.a ENSGT00940000157815.b ENSGT00390000000358 ENSGT00880000138038 ENSGT00950000182982.A.a ENSGT00390000001962 ENSGT00950000182982.C ENSGT01050000244838.D.a.a ENSGT00950000182984.a Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 311 ENSGT00390000009631 ENSGT00650000093438 ENSGT00940000155536 ENSGT00940000156143.a.a #11 ENSGT00940000155377 #13 ENSGT00940000155610 #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.a.a #22 ENSGT00390000004766 #23 ENSGT00940000155141.w.b ENSGT00940000165475 ENSGT00510000047616.b ENSGT00390000018131 Asian bonytongue MODERN SPECIES 23 ENSSFOG00015032075 ENSSFOG00015032006 ADGRB1 (ENSSFOG00015010029) ENSSFOG00015024453 cep162 (ENSSFOG00015010130) mrap2a (ENSSFOG00015026546) cyb5r4 (ENSSFOG00015010191) sim1a (ENSSFOG00015010231) #11 ASCC3 (ENSSFOG00015010273) #13 GRIK2 (ENSSFOG00015010394) #15 HACE1 (ENSSFOG00015010479) #17 lin28b (ENSSFOG00015010561) #18 bves (ENSSFOG00015010576) #19 popdc3 (ENSSFOG00015031208) #20 prep (ENSSFOG00015010595) #21 prdm1a (ENSSFOG00015010649) #22 atg5 (ENSSFOG00015032429) #23 ENSSFOG00015010684 ENSSFOG00015031838 lyplal1 (ENSSFOG00015010749) preb (ENSSFOG00015010702) wdr26b (ENSSFOG00015010778) CNIH4 (ENSSFOG00015029508) vegfaa (ENSSFOG00015010876) gprc6a (ENSSFOG00015010941) kpna5 (ENSSFOG00015011018) zufsp (ENSSFOG00015025959) ENSSFOG00015027676 rwdd1 (ENSSFOG00015026615) ENSSFOG00015029312 zufsp (ENSSFOG00015028204) P. kingsleyae MODERN SPECIES 80 efna3b (ENSPKIG00000013966) ENSPKIG00000013934 flad1 (ENSPKIG00000013919) ENSPKIG00000013873 s100a11 (ENSPKIG00000013840) ENSPKIG00000013824 sim1a (ENSPKIG00000013759) #11 ASCC3 (ENSPKIG00000013639) #13 GRIK2 (ENSPKIG00000013540) #15 ENSPKIG00000013489 HACE1 (ENSPKIG00000013369) #17 lin28b (ENSPKIG00000013309) #18 bves (ENSPKIG00000013243) #19 popdc3 (ENSPKIG00000013198) #20 prep (ENSPKIG00000013135) #21 prdm1a (ENSPKIG00000013054) #22 atg5 (ENSPKIG00000012978) #23 ENSPKIG00000012940 ENSPKIG00000012928 hint3 (ENSPKIG00000012913) trmt11 (ENSPKIG00000012868) glb1 (ENSPKIG00000012804) ENSPKIG00000012777 ENSPKIG00000012767 ENSPKIG00000012749 ENSPKIG00000012737 CCR8 (ENSPKIG00000012731) CX3CR1 (ENSPKIG00000012712) cobl (ENSPKIG00000012618) ENSPKIG00000012532 ddc (ENSPKIG00000012496) Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000154798.a.d.a.b #22 Asian bonytongue MODERN SPECIES SYT14 (ENSSFOG00015004319) nt5c1ba (ENSSFOG00015004347) rdh14b (ENSSFOG00015004378) kcns3b (ENSSFOG00015004386) ttc32 (ENSSFOG00015028796) matn3a (ENSSFOG00015004467) TENT5A (ENSSFOG00015029329) elovl4b (ENSSFOG00015031177) ROCK2 (ENSSFOG00015004523) sobpb (ENSSFOG00015004671) #31 ENSSFOG00015004687 ##25 ENSSFOG00015004714 #24 mrap2b (ENSSFOG00015004796) SIM1 (ENSSFOG00015004830) #11 GRIK2 (ENSSFOG00015004888) #15 prdm1a (ENSSFOG00015004973) #22 NCOA7 (ENSSFOG00015005044) ENSSFOG00015005075 rnf146 (ENSSFOG00015005095) ENSSFOG00015005108 ENSSFOG00015005127 KCNF1 (ENSSFOG00015005132) laptm4a (ENSSFOG00015025879) PRSS35 (ENSSFOG00015005366) ENSSFOG00015027897 ENSSFOG00015005373 pgm3 (ENSSFOG00015005408) ngs (ENSSFOG00015005446) ccnc (ENSSFOG00015005484) #8 FAXC (ENSSFOG00015005516) POU3F2 (ENSSFOG00015029669) Clupeocephala ANCESTRAL SPECIES 184 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00950000182996.b.a.b ENSGT00940000162108 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000166857 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Otomorpha ANCESTRAL SPECIES 202 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00940000161029 ENSGT00950000182996.b.a.b ENSGT00940000162108 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Clupeiformes ANCESTRAL SPECIES 393 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000156794.g ENSGT00940000154412.B.a ENSGT00940000158641.a.b ENSGT00390000003488.b.a.b ENSGT00940000160002 Atlantic herring MODERN SPECIES 2 ENSCHAG00000013225 leng1 (ENSCHAG00000013196) ENSCHAG00000013189 prpf31 (ENSCHAG00000012582) cnot3a (ENSCHAG00000012532) ENSCHAG00000012513 CYTH2 (ENSCHAG00000010359) LIMD1 (ENSCHAG00000010053) lars2 (ENSCHAG00000009063) TMEM158 (ENSCHAG00000009004) ENSCHAG00000008995 ENSCHAG00000008927 snrnp48 (ENSCHAG00000008916) sri (ENSCHAG00000008907) ENSCHAG00000008866 prdm1a (ENSCHAG00000008829) #22 atg5 (ENSCHAG00000008806) #23 gabpb2b (ENSCHAG00000008795) ENSCHAG00000008785 sema6e (ENSCHAG00000007943) ENSCHAG00000007907 AGO3 (ENSCHAG00000007795) ENSCHAG00000007756 ENSCHAG00000007739 ENSCHAG00000007695 ENSCHAG00000007679 ENSCHAG00000007653 ENSCHAG00000007644 ENSCHAG00000007623 ENSCHAG00000007609 ENSCHAG00000007601 Denticle herring MODERN SPECIES 15 ENSDCDG00000021505 scn1ba (ENSDCDG00000021662) ENSDCDG00000021663 psmc4 (ENSDCDG00000021667) ENSDCDG00000021675 ENSDCDG00000021678 THSD7A (ENSDCDG00000021703) ENSDCDG00000022201 ICA1 (ENSDCDG00000022208) GLCCI1 (ENSDCDG00000022214) mios (ENSDCDG00000022223) ENSDCDG00000022248 zgc:113232 (ENSDCDG00000022250) snrnp48 (ENSDCDG00000022256) sri (ENSDCDG00000022259) prdm1a (ENSDCDG00000022263) #22 atg5 (ENSDCDG00000022269) #23 gabpb2b (ENSDCDG00000004048) ENSDCDG00000004055 sema6e (ENSDCDG00000004138) TNFAIP8L2 (ENSDCDG00000005058) lysmd1 (ENSDCDG00000005060) CFAP418 (ENSDCDG00000005061) ENSDCDG00000005063 plekhf2 (ENSDCDG00000005069) NDUFAF6 (ENSDCDG00000005074) nagpa (ENSDCDG00000005086) tp53inp1 (ENSDCDG00000005100) ccne2 (ENSDCDG00000005131) ENSDCDG00000005271 gbp (ENSDCDG00000005282) Otophysi ANCESTRAL SPECIES 342 ENSGT00940000155536 ENSGT00940000156143.a.a #11 ENSGT00940000155377 #13 ENSGT00940000155610.o.a.c #15 ENSGT00940000155839 #17 ENSGT00940000153295.b #18 ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 Characiphysae ANCESTRAL SPECIES 50 ENSGT00940000155162.o.b ENSGT00940000164926 ENSGT00940000158341.a ENSGT01030000234542.b.a.a.a.a ENSGT00940000154371.a.b.b ENSGT01030000234606.a.b.o ENSGT00940000158341.b ENSGT01030000234542.b.a.a.a.b ENSGT00390000014801 ENSGT00390000017724.a.a ENSGT00390000000803.c ENSGT00940000156485 ENSGT00390000012959.b ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000157616.j.b ENSGT00940000159356.a.a Channel catfish MODERN SPECIES 12 AADAC (ENSIPUG00000004091) ENSIPUG00000004053 MBNL1 (ENSIPUG00000003995) pcsk7 (ENSIPUG00000003926) tagln (ENSIPUG00000003904) ENSIPUG00000003882 ARHGEF2 (ENSIPUG00000003850) ENSIPUG00000003828 Tpm3 (ENSIPUG00000003781) pmvk (ENSIPUG00000003760) eaf1 (ENSIPUG00000003752) bbs9 (ENSIPUG00000003699) bmper (ENSIPUG00000003630) nt5c3a (ENSIPUG00000003571) sri (ENSIPUG00000003549) prdm1a (ENSIPUG00000003498) #22 atg5 (ENSIPUG00000003428) #23 NFATC1 (ENSIPUG00000003388) sall3 (ENSIPUG00000003378) nrn1b (ENSIPUG00000003358) RREB1 (ENSIPUG00000003335) riok1 (ENSIPUG00000003290) nebl (ENSIPUG00000003281) PIP4K2A (ENSIPUG00000003162) bmi1b (ENSIPUG00000003131) dnajc1 (ENSIPUG00000003096) si:dkey-29d8.3 (ENSIPUG00000003068) ENSIPUG00000003051 ENSIPUG00000003040 klhl40a (ENSIPUG00000003027) hhatl (ENSIPUG00000002997) Characiphysae_b ANCESTRAL SPECIES 54 ENSGT00940000164926 ENSGT00940000158341.a ENSGT01030000234542.b.a.a.a.a ENSGT00940000154371.a.b.b ENSGT01030000234606.a.b.o ENSGT00940000158341.b ENSGT00940000166692 ENSGT01030000234542.b.a.a.a.b ENSGT00390000014801 ENSGT00390000017724.a.a ENSGT00390000000803.c ENSGT00940000156485 ENSGT00390000012959.b ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000157616.j.b ENSGT00940000159356.a.a Characoidei ANCESTRAL SPECIES 55 ENSGT00940000155975 ENSGT00950000182897.B.a.a.d.d ENSGT00940000157676 ENSGT00940000155162.o.b ENSGT00940000164926 ENSGT00940000158341.b ENSGT00940000166692 ENSGT01030000234542.b.a.a.a.b ENSGT00390000014801 ENSGT00390000017724.a.a ENSGT00390000000803.c ENSGT00940000156485 ENSGT00390000012959.b ENSGT00940000153979.B ENSGT00940000162584.j ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00940000157616.j.b ENSGT00940000159356.a.a Red-bellied piranha MODERN SPECIES 185 prdm1a (ENSPNAG00000028442) #22 atg5 (ENSPNAG00000006021) #23 NFATC1 (ENSPNAG00000007025) ENSPNAG00000028248 si:dkey-29d8.3 (ENSPNAG00000006073) ENSPNAG00000028220 ENSPNAG00000028212 ENSPNAG00000004318 klhl40a (ENSPNAG00000028180) hhatla (ENSPNAG00000028167) ctdsplb (ENSPNAG00000028104) plcd1b (ENSPNAG00000028052) afg3l2 (ENSPNAG00000004288) inhbab (ENSPNAG00000027986) mplkip (ENSPNAG00000027979) ralab (ENSPNAG00000027973) Mexicana tetra MODERN SPECIES 8 MBNL1 (ENSAMXG00000004629) pcsk7 (ENSAMXG00000029572) tagln (ENSAMXG00000037043) ENSAMXG00000035647 ARHGEF2 (ENSAMXG00000004588) ENSAMXG00000029933 ENSAMXG00000004579 pmvk (ENSAMXG00000030964) eaf1 (ENSAMXG00000004558) BBS9 (ENSAMXG00000004531) bmper (ENSAMXG00000004511) nt5c3a (ENSAMXG00000032837) sri (ENSAMXG00000043352) ENSAMXG00000043180 ENSAMXG00000030586 prdm1a (ENSAMXG00000004952) #22 atg5 (ENSAMXG00000004956) #23 ENSAMXG00000040504 NFATC1 (ENSAMXG00000018016) ENSAMXG00000037648 ENSAMXG00000031411 ENSAMXG00000037605 SALL3 (ENSAMXG00000011185) ENSAMXG00000038645 ENSAMXG00000037546 nrn1b (ENSAMXG00000029876) RREB1 (ENSAMXG00000015314) riok1 (ENSAMXG00000015286) ENSAMXG00000034116 ENSAMXG00000044026 bmi1b (ENSAMXG00000031978) Electric eel MODERN SPECIES 273 ENSEEEG00000012586 bmper (ENSEEEG00000012591) ENSEEEG00000012637 nt5c3a (ENSEEEG00000012644) sri (ENSEEEG00000012653) ENSEEEG00000012654 prdm1a (ENSEEEG00000012657) #22 atg5 (ENSEEEG00000012775) #23 NFATC1 (ENSEEEG00000012776) SALL3 (ENSEEEG00000012783) RREB1 (ENSEEEG00000012784) riok1 (ENSEEEG00000012788) ENSEEEG00000012830 ENSEEEG00000012835 bmi1b (ENSEEEG00000012854) dnajc1 (ENSEEEG00000012858) Cyprinoidei ANCESTRAL SPECIES 86 ENSGT00950000182996.b.a.a.b.d.b.a.a.a ENSGT00390000002563.a #19 ENSGT00390000002563.b.a.a #20 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000003312 ENSGT00940000165224.a.b ENSGT00940000153979.B ENSGT00390000012959.b ENSGT00390000006983.a.b.a ENSGT00940000156485 ENSGT00390000000803 ENSGT00390000017724.a.a ENSGT00390000014801 ENSGT00940000158341.b ENSGT00390000014772.l ENSGT00940000171486.A ENSGT00940000156787 ENSGT00940000156446 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 295 ENSGT00990000203803 ENSGT00940000155107.a.a.a.d ENSGT00940000155107.a.a.a.c ENSGT00940000159465.g ENSGT00940000158915.f ENSGT00940000159465.h.a ENSGT00940000158915.e ENSGT00940000155536 ENSGT00950000182996.b.a.a.b.d.b.a.a.a.a ENSGT00940000155839.i #17 ENSGT00940000155610.o.a.c.a.b #15 ENSGT00940000155610.o.a.c.b #15 ENSGT00940000155377 #13 ENSGT00940000156143.a.a.g #11 ENSGT01000000214440.A.a.b.a.g.b.b.a ENSGT00940000154798.a.d.a.c #22 ENSGT00390000004766.e.a #23 ENSGT00390000003312.c ENSGT00940000165224.a.b.a ENSGT00940000153979.B.a ENSGT00390000012959.b.g ENSGT00390000006983.a.b.a ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l ENSGT00940000171486.A.c ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a Goldfish MODERN SPECIES 35 ENSCARG00000006508 ENSCARG00000006495 ENSCARG00000006487 csf3r (ENSCARG00000006421) ENSCARG00000006407 HACE1 (ENSCARG00000006210) #17 ENSCARG00000006159 ENSCARG00000006154 ENSCARG00000006127 ENSCARG00000006094 ENSCARG00000006079 #15 ENSCARG00000026268 ASCC3 (ENSCARG00000025580) #13 sim1a (ENSCARG00000025500) #11 STX12 (ENSCARG00000025493) prdm1a (ENSCARG00000025476) #22 atg5 (ENSCARG00000025405) #23 med18 (ENSCARG00000025385) ENSCARG00000025378 sri (ENSCARG00000025361) nt5c3a (ENSCARG00000025336) ENSCARG00000025329 ENSCARG00000025326 ENSCARG00000025318 bmper (ENSCARG00000024848) BBS9 (ENSCARG00000024661) pmvk (ENSCARG00000024613) ARHGEF2 (ENSCARG00000021741) mbpb (ENSCARG00000021610) ENSCARG00000021601 ZNF236 (ENSCARG00000021448) Cyprininae_a ANCESTRAL SPECIES 244 ENSGT00940000156762.c.a ENSGT00990000203803.b ENSGT00940000155107.a.a.a.c ENSGT00940000159465.g.a ENSGT00940000158915.e ENSGT00940000155536.u ENSGT00950000182996.b.a.a.b.d.b.a.a.a.a ENSGT00940000155839.i #17 ENSGT00940000155610.o.a.c.a.b #15 ENSGT00940000155610.o.a.c.b #15 ENSGT00940000155377 #13 ENSGT00940000156143.a.a.g #11 ENSGT00390000002563.a.d #19 ENSGT00390000002563.b.a.a.b #20 ENSGT01000000214440.A.a.b.a.g.b.b.a ENSGT00940000154798.a.d.a.c #22 ENSGT00390000004766.e.a #23 ENSGT00390000003312.c ENSGT00940000165224.a.b.a ENSGT00940000153979.B.a ENSGT00390000012959.b.g ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l.e ENSGT00940000171486.A.c ENSGT00940000171486.A.d ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a Common carp reference MODERN SPECIES 2 csf3r (ENSCCRG00000013947) ENSCCRG00000054332 ENSCCRG00000021695 ENSCCRG00000066209 #17 ENSCCRG00000072766 ENSCCRG00000071213 GRIK2 (ENSCCRG00000008375) #15 ENSCCRG00000068516 #13 ENSCCRG00000061187 sim1a (ENSCCRG00000026816) #11 ENSCCRG00000056460 bves (ENSCCRG00000033770) #19 popdc3 (ENSCCRG00000076280) #20 ENSCCRG00000033774 ENSCCRG00000055780 prdm1a (ENSCCRG00000040232) #22 atg5 (ENSCCRG00000060205) #23 med18 (ENSCCRG00000029904) ENSCCRG00000015576 sri (ENSCCRG00000006341) nt5c3a (ENSCCRG00000002601) ENSCCRG00000054709 ENSCCRG00000076680 bmper (ENSCCRG00000015026) ENSCCRG00000014884 ENSCCRG00000070196 eaf1 (ENSCCRG00000037576) pmvk (ENSCCRG00000075109) ENSCCRG00000037589 mbpb (ENSCCRG00000037993) ENSCCRG00000071261 Golden-line barbel MODERN SPECIES 36 GRIK2 (ENSSGRG00000018977) #15 ASCC3 (ENSSGRG00000018991) #13 sim1a (ENSSGRG00000019171) #11 popdc3 (ENSSGRG00000019174) #20 STX12 (ENSSGRG00000019176) prdm1a (ENSSGRG00000019191) #22 atg5 (ENSSGRG00000019193) #23 med18 (ENSSGRG00000019194) ENSSGRG00000019195 sri (ENSSGRG00000019196) nt5c3a (ENSSGRG00000019198) bmper (ENSSGRG00000019208) BBS9 (ENSSGRG00000019532) ENSSGRG00000019540 ARHGEF2 (ENSSGRG00000019572) mbpb (ENSSGRG00000020300) ENSSGRG00000020301 ENSSGRG00000020302 ENSSGRG00000020305 ZNF407 (ENSSGRG00000020309) SALL3 (ENSSGRG00000020312) Cyprininae ANCESTRAL SPECIES 716 ENSGT00940000154798.a.d.a.d #22 ENSGT00390000004766.e.b #23 ENSGT00390000003312.d ENSGT00940000165224.a.b.b ENSGT00940000153979.B.b ENSGT00390000012959.b.h ENSGT00940000156485.k ENSGT00390000000803.f ENSGT00390000017724.a.a ENSGT00390000014801.l ENSGT00940000158341.b.f ENSGT00940000171486.A.d Goldfish MODERN SPECIES 7 ENSCARG00000017009 smpdl3b (ENSCARG00000017003) LIN28A (ENSCARG00000017001) ##18 ENSCARG00000016997 mtf1 (ENSCARG00000016975) INPP5B (ENSCARG00000016203) ENSCARG00000016172 ZC3H12A (ENSCARG00000016167) ENSCARG00000016158 ENSCARG00000016153 GRIK3 (ENSCARG00000015279) csf3r (ENSCARG00000015232) cyb5r4 (ENSCARG00000015193) ENSCARG00000015182 HACE1 (ENSCARG00000015044) #17 prdm1a (ENSCARG00000015012) #22 atg5 (ENSCARG00000014991) #23 med18 (ENSCARG00000014978) ENSCARG00000014968 ENSCARG00000014966 sri (ENSCARG00000014929) nt5c3a (ENSCARG00000014552) bmper (ENSCARG00000013960) BBS9 (ENSCARG00000013906) eaf1 (ENSCARG00000013882) pmvk (ENSCARG00000013877) ARHGEF2 (ENSCARG00000012050) ENSCARG00000011977 ENSCARG00000011971 SALL3 (ENSCARG00000011969) TRPC7 (ENSCARG00000011647) Cyprininae_a ANCESTRAL SPECIES 475 ENSGT00940000156143.a.a.h #11 ENSGT00950000182996.b.a.a.b.d.b.a.a.a.b ENSGT00390000002563.a.c #19 ENSGT00390000002563.b.a.a.a #20 ENSGT01000000214440.A.a.b.a.g.b.b.b ENSGT00940000154798.a.d.a.d #22 ENSGT00390000004766.e.b #23 ENSGT00390000003312.d ENSGT00940000165224.a.b.b ENSGT00940000153979.B.b ENSGT00390000012959.b.h ENSGT00940000156485.k ENSGT00390000000803.f ENSGT00390000017724.a.a ENSGT00390000014801.l ENSGT00940000158341.b.f ENSGT00390000014772.l.f Common carp reference MODERN SPECIES 47 ENSCCRG00000056036 ENSCCRG00000067229 csf3r (ENSCCRG00000005482) cyb5r4 (ENSCCRG00000005474) ENSCCRG00000018154 ENSCCRG00000059060 HACE1 (ENSCCRG00000018174) #17 GRIK2 (ENSCCRG00000078513) #15 ENSCCRG00000079992 #13 ENSCCRG00000019548 sim1a (ENSCCRG00000027612) #11 ENSCCRG00000008088 bves (ENSCCRG00000009914) #19 popdc3 (ENSCCRG00000061280) #20 ENSCCRG00000025465 prdm1a (ENSCCRG00000058299) #22 atg5 (ENSCCRG00000040266) #23 med18 (ENSCCRG00000040366) ENSCCRG00000040371 sri (ENSCCRG00000069496) nt5c3a (ENSCCRG00000006337) bmper (ENSCCRG00000006275) ENSCCRG00000006261 eaf1 (ENSCCRG00000081682) pmvk (ENSCCRG00000073246) ENSCCRG00000038177 ENSCCRG00000075709 mbpb (ENSCCRG00000067498) ENSCCRG00000026171 ENSCCRG00000066277 ENSCCRG00000058634 Golden-line barbel MODERN SPECIES 430 sim1a (ENSSGRG00000044328) #11 bves (ENSSGRG00000044325) #19 popdc3 (ENSSGRG00000044323) #20 ENSSGRG00000044321 prdm1a (ENSSGRG00000044317) #22 atg5 (ENSSGRG00000044303) #23 med18 (ENSSGRG00000044300) ENSSGRG00000044298 sri (ENSSGRG00000044279) nt5c3a (ENSSGRG00000043948) bmper (ENSSGRG00000043933) BBS9 (ENSSGRG00000043773) eaf1 (ENSSGRG00000043772) pmvk (ENSSGRG00000043771) hprt1l (ENSSGRG00000043770) ARHGEF2 (ENSSGRG00000043769) mbpb (ENSSGRG00000043768) ENSSGRG00000043767 ENSSGRG00000043766 ENSSGRG00000043765 Zebrafish MODERN SPECIES 7 GRB10 (ENSDARG00000035308) ddc (ENSDARG00000016494) entpd3 (ENSDARG00000035309) GASK1A (ENSDARG00000076862) pomgnt2 (ENSDARG00000010941) snrka (ENSDARG00000070832) ano10a (ENSDARG00000057736) TCAIM (ENSDARG00000079881) trim71 (ENSDARG00000075593) cnot10 (ENSDARG00000058528) ENSDARG00000070755 ENSDARG00000058532 bves (ENSDARG00000058548) #19 popdc3 (ENSDARG00000058551) #20 STX12 (ENSDARG00000044605) prdm1a (ENSDARG00000002445) #22 atg5 (ENSDARG00000023396) #23 med18 (ENSDARG00000041237) ENSDARG00000100486 sri (ENSDARG00000058593) nt5c3a (ENSDARG00000058597) ENSDARG00000095946 bmper (ENSDARG00000101980) BBS9 (ENSDARG00000079217) eaf1 (ENSDARG00000070795) pmvk (ENSDARG00000070798) ARHGEF2 (ENSDARG00000075819) mbpb (ENSDARG00000089413) ZNF236 (ENSDARG00000095890) ENSDARG00000087536 SALL3 (ENSDARG00000079613) Euteleosteomorpha ANCESTRAL SPECIES 106 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000166857 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 Acanthomorphata ANCESTRAL SPECIES 34 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000166857 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b Euacanthomorphacea ANCESTRAL SPECIES 40 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00950000182996.b.a.b ENSGT00390000015701 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000153979.B ENSGT00940000166686 ENSGT00940000166857 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b Percomorphaceae ANCESTRAL SPECIES ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 Ovalentaria ANCESTRAL SPECIES 3 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 ENSGT00940000180993 ENSGT00940000159463.n.a Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b.b.b.b ENSGT01030000234575.c.a.a.a.a.a.b.b.b.b.b.a.b ENSGT00940000169377 ENSGT00940000159463.n.a Aplocheiloidei ANCESTRAL SPECIES 2 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b.b.b.a.a ENSGT00940000169377 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 Turquoise killifish MODERN SPECIES 1614 ENSNFUG00015019497 ENSNFUG00015019591 ENSNFUG00015019592 ENSNFUG00015019610 ENSNFUG00015019623 iqgap3 (ENSNFUG00015019692) ANKRD34A (ENSNFUG00015019848) PNP4B (ENSNFUG00015019852) DECR1 (ENSNFUG00015019875) PMVK (ENSNFUG00015019934) Nfu_g_1_010950 (ENSNFUG00015019938) ARHGEF2 (ENSNFUG00015019974) ENSNFUG00015020191 ENSNFUG00015020194 ENSNFUG00015020206 prdm1a (ENSNFUG00015020207) #22 ATG5 (ENSNFUG00015020219) #23 DCTN3 (ENSNFUG00015020234) nt5c3a (ENSNFUG00015020240) BBS9 (ENSNFUG00015020254) ENSNFUG00015020281 ENSNFUG00015020282 bmper (ENSNFUG00015009090) EAF1 (ENSNFUG00015009955) METTL6 (ENSNFUG00015009985) SH3BP5B (ENSNFUG00015009998) CAPN7 (ENSNFUG00015010054) ENSNFUG00015010647 ENSNFUG00015010657 ENSNFUG00015010669 ENSNFUG00015010683 Mangrove rivulus MODERN SPECIES 112 tnfaip8l2b (ENSKMAG00000017937) lysmd1 (ENSKMAG00000017929) scnm1 (ENSKMAG00000017892) tmod4 (ENSKMAG00000017859) mcl1b (ENSKMAG00000017846) ensab (ENSKMAG00000017830) hormad1 (ENSKMAG00000017813) onecutl (ENSKMAG00000017805) ctss2.1 (ENSKMAG00000017771) ctsk (ENSKMAG00000017740) lingo4b (ENSKMAG00000017727) si:ch211-113g11.6 (ENSKMAG00000017678) tlr18 (ENSKMAG00000017659) s100a1 (ENSKMAG00000017647) ENSKMAG00000017639 prdm1a (ENSKMAG00000017597) #22 atg5 (ENSKMAG00000017505) #23 dctn3 (ENSKMAG00000017491) nt5c3a (ENSKMAG00000017452) BBS9 (ENSKMAG00000017384) bmper (ENSKMAG00000017334) eaf1 (ENSKMAG00000017313) mettl6 (ENSKMAG00000017283) ENSKMAG00000017264 sh3bp5b (ENSKMAG00000017214) capn7 (ENSKMAG00000017123) ENSKMAG00000017079 ENSKMAG00000017045 mef2d (ENSKMAG00000016918) rhbg (ENSKMAG00000016699) hapln2 (ENSKMAG00000016669) Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01010000225426 ENSGT01000000214792.a ENSGT00940000169377 ENSGT00940000159463.n.a Poeciliinae ANCESTRAL SPECIES ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01010000225426 ENSGT01000000214792.b.a ENSGT01000000214996.b ENSGT01000000214996.a Poecilia ANCESTRAL SPECIES ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01010000225426 ENSGT01000000214792.b.a.b ENSGT01000000214792.b.a.a ENSGT01000000214996.b NAME_6 ANCESTRAL SPECIES 264 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 3055 prdm1a (ENSPLAG00000007376) #22 Sailfin molly MODERN SPECIES 1124 si:ch211-113g11.6 (ENSPLAG00000001483) tlr18 (ENSPLAG00000001497) s100a1 (ENSPLAG00000001509) prdm1a (ENSPLAG00000001513) #22 Amazon molly MODERN SPECIES 668 si:ch211-113g11.6 (ENSPFOG00000018319) tlr18 (ENSPFOG00000018309) s100a1 (ENSPFOG00000018305) prdm1a (ENSPFOG00000018298) #22 atg5 (ENSPFOG00000018282) #23 dctn3 (ENSPFOG00000018277) ENSPFOG00000023301 nt5c3a (ENSPFOG00000018265) BBS9 (ENSPFOG00000018183) Guppy MODERN SPECIES 446 sema6e (ENSPREG00000019789) tnfaip8l2b (ENSPREG00000019715) lysmd1 (ENSPREG00000019708) scnm1 (ENSPREG00000019679) tmod4 (ENSPREG00000019642) mcl1b (ENSPREG00000019624) ensab (ENSPREG00000019614) hormad1 (ENSPREG00000019588) onecutl (ENSPREG00000019570) ctss2.1 (ENSPREG00000019538) ctsk (ENSPREG00000019510) lingo4b (ENSPREG00000019504) si:ch211-113g11.6 (ENSPREG00000019473) tlr18 (ENSPREG00000019449) s100a1 (ENSPREG00000019434) prdm1a (ENSPREG00000019394) #22 atg5 (ENSPREG00000019368) #23 dctn3 (ENSPREG00000019342) ENSPREG00000019326 nt5c3a (ENSPREG00000019301) BBS9 (ENSPREG00000019238) bmper (ENSPREG00000019172) ENSPREG00000019148 mettl6 (ENSPREG00000019112) ENSPREG00000019093 ENSPREG00000019087 sh3bp5b (ENSPREG00000019075) capn7 (ENSPREG00000019020) ENSPREG00000019008 ENSPREG00000018989 ENSPREG00000018975 Platyfish MODERN SPECIES 17 sema6e (ENSXMAG00000019150) tnfaip8l2b (ENSXMAG00000021720) lysmd1 (ENSXMAG00000028482) scnm1 (ENSXMAG00000019171) tmod4 (ENSXMAG00000019176) mcl1b (ENSXMAG00000028458) ensab (ENSXMAG00000008997) hormad1 (ENSXMAG00000008994) onecutl (ENSXMAG00000024545) ctss2.1 (ENSXMAG00000008983) ctsk (ENSXMAG00000008976) lingo4b (ENSXMAG00000019541) si:ch211-113g11.6 (ENSXMAG00000013372) tlr18 (ENSXMAG00000013367) ENSXMAG00000013365 prdm1a (ENSXMAG00000013351) #22 atg5 (ENSXMAG00000013338) #23 dctn3 (ENSXMAG00000025325) BBS9 (ENSXMAG00000013314) bmper (ENSXMAG00000013307) eaf1 (ENSXMAG00000013306) mettl6 (ENSXMAG00000013302) ENSXMAG00000029968 sh3bp5b (ENSXMAG00000017255) capn7 (ENSXMAG00000017258) ENSXMAG00000022661 ENSXMAG00000013295 ENSXMAG00000025695 ENSXMAG00000013294 ENSXMAG00000013500 ENSXMAG00000013292 NAME_4 ANCESTRAL SPECIES 46 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734.b ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b.b.b.b ENSGT01000000214792.a ENSGT00940000169377 ENSGT00940000159463.n.a Sheepshead minnow MODERN SPECIES 112 ENSCVAG00000018918 sema6e (ENSCVAG00000018933) tnfaip8l2b (ENSCVAG00000018945) lysmd1 (ENSCVAG00000018953) scnm1 (ENSCVAG00000018958) tmod4 (ENSCVAG00000018984) mcl1b (ENSCVAG00000018992) ensab (ENSCVAG00000019003) onecutl (ENSCVAG00000019013) ctss2.1 (ENSCVAG00000019022) ctsk (ENSCVAG00000019029) lingo4b (ENSCVAG00000019033) si:ch211-113g11.6 (ENSCVAG00000019043) tlr18 (ENSCVAG00000019049) s100a1 (ENSCVAG00000019053) prdm1a (ENSCVAG00000019081) #22 atg5 (ENSCVAG00000019100) #23 dctn3 (ENSCVAG00000019106) ENSCVAG00000019118 nt5c3a (ENSCVAG00000019141) BBS9 (ENSCVAG00000000502) bmper (ENSCVAG00000019224) eaf1 (ENSCVAG00000019241) mettl6 (ENSCVAG00000019257) ENSCVAG00000019264 ENSCVAG00000019279 sh3bp5b (ENSCVAG00000019342) capn7 (ENSCVAG00000019402) ENSCVAG00000019413 ENSCVAG00000019419 ENSCVAG00000019435 Mummichog MODERN SPECIES 319 ENSFHEG00000009099 mcl1b (ENSFHEG00000009084) ensab (ENSFHEG00000009072) hormad1 (ENSFHEG00000009061) onecutl (ENSFHEG00000009036) ctss (ENSFHEG00000009025) ctsk (ENSFHEG00000008966) lingo4b (ENSFHEG00000008935) si:ch211-113g11.6 (ENSFHEG00000008920) tlr18 (ENSFHEG00000008894) s100a1 (ENSFHEG00000008882) prdm1a (ENSFHEG00000008876) #22 atg5 (ENSFHEG00000008864) #23 Oryzias ANCESTRAL SPECIES 2 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842 ENSGT00940000169377 ENSGT00940000180993 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842 ENSGT00940000169377 ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 Indian medaka MODERN SPECIES 33 ENSOMEG00000018304 tnfaip8l2b (ENSOMEG00000018284) lysmd1 (ENSOMEG00000018268) scnm1 (ENSOMEG00000018249) tmod4 (ENSOMEG00000018212) mcl1b (ENSOMEG00000018133) ensab (ENSOMEG00000018107) hormad1 (ENSOMEG00000018059) onecutl (ENSOMEG00000017930) ctss2.1 (ENSOMEG00000000455) ctsk (ENSOMEG00000017897) lingo4b (ENSOMEG00000017886) si:ch211-113g11.6 (ENSOMEG00000000444) tlr18 (ENSOMEG00000017802) s100a1 (ENSOMEG00000017785) prdm1a (ENSOMEG00000017720) #22 atg5 (ENSOMEG00000017619) #23 dctn3 (ENSOMEG00000017590) ENSOMEG00000017569 nt5c3a (ENSOMEG00000017553) BBS9 (ENSOMEG00000017528) Javanese ricefish MODERN SPECIES 7 ENSOJAG00000006374 tnfaip8l2b (ENSOJAG00000006356) lysmd1 (ENSOJAG00000006342) scnm1 (ENSOJAG00000006310) tmod4 (ENSOJAG00000006225) mcl1b (ENSOJAG00000006201) ensab (ENSOJAG00000006169) hormad1 (ENSOJAG00000006132) onecutl (ENSOJAG00000006116) ctss2.1 (ENSOJAG00000006067) ctsk (ENSOJAG00000006038) lingo4b (ENSOJAG00000006026) si:ch211-113g11.6 (ENSOJAG00000006014) tlr18 (ENSOJAG00000005703) s100a1 (ENSOJAG00000005662) prdm1a (ENSOJAG00000005622) #22 atg5 (ENSOJAG00000005597) #23 dctn3 (ENSOJAG00000005586) nt5c3a (ENSOJAG00000005535) BBS9 (ENSOJAG00000005404) bmper (ENSOJAG00000003771) ENSOJAG00000003426 ENSOJAG00000003420 mettl6 (ENSOJAG00000003413) sh3bp5b (ENSOJAG00000003381) capn7 (ENSOJAG00000002983) ENSOJAG00000002906 ENSOJAG00000002900 mef2d (ENSOJAG00000002840) rhbg (ENSOJAG00000002593) hapln2 (ENSOJAG00000002529) Oryzias_a ANCESTRAL SPECIES 37 ENSGT00940000154412.B.a.b ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00940000167628 ENSGT01100000263513.a.a.b.a.b.a ENSGT00940000166686.a ENSGT00940000166686.b ENSGT00530000063745.a ENSGT00940000159724 ENSGT00940000157343.a.b ENSGT00940000161384 ENSGT00950000182844.b.b.a Chinese medaka MODERN SPECIES 286 ENSOSIG00000004594 sema6e (ENSOSIG00000004301) scnm1 (ENSOSIG00000004262) tmod4 (ENSOSIG00000004198) tnfaip8l2b (ENSOSIG00000004194) mcl1b (ENSOSIG00000004191) ensab (ENSOSIG00000004188) hormad1 (ENSOSIG00000004183) onecutl (ENSOSIG00000004177) ctss2.1 (ENSOSIG00000004175) ctsk (ENSOSIG00000004171) lingo4b (ENSOSIG00000004168) si:ch211-113g11.6 (ENSOSIG00000004164) tlr18 (ENSOSIG00000004159) ENSOSIG00000004156 prdm1a (ENSOSIG00000004149) #22 atg5 (ENSOSIG00000004137) #23 dctn3 (ENSOSIG00000004124) ENSOSIG00000004120 ENSOSIG00000004119 ENSOSIG00000004108 snrnp48 (ENSOSIG00000004105) ENSOSIG00000004101 ENSOSIG00000004091 ENSOSIG00000004082 mettl25b (ENSOSIG00000004070) ISG20L2 (ENSOSIG00000004064) ENSOSIG00000004060 hapln2 (ENSOSIG00000004053) rhbg (ENSOSIG00000003910) mef2d (ENSOSIG00000003737) Japanese Medaka HdrR MODERN SPECIES 7 ENSORLG00000022997 tnfaip8l2b (ENSORLG00000028043) lysmd1 (ENSORLG00000015824) scnm1 (ENSORLG00000015819) tmod4 (ENSORLG00000015802) mcl1b (ENSORLG00000015753) ensab (ENSORLG00000028623) hormad1 (ENSORLG00000015746) onecutl (ENSORLG00000024818) ctss2.1 (ENSORLG00000015733) ctsk (ENSORLG00000015716) lingo4b (ENSORLG00000023866) si:ch211-113g11.6 (ENSORLG00000027544) tlr18 (ENSORLG00000015704) ENSORLG00000023818 prdm1a (ENSORLG00000015684) #22 atg5 (ENSORLG00000015681) #23 ENSORLG00000022470 dctn3 (ENSORLG00000023253) ENSORLG00000015663 zgc:113232 (ENSORLG00000015661) snrnp48 (ENSORLG00000015654) ENSORLG00000023743 ENSORLG00000015649 ENSORLG00000026501 ENSORLG00000028659 ENSORLG00000022914 bcan (ENSORLG00000015637) hapln2 (ENSORLG00000015619) rhbg (ENSORLG00000015596) mef2d (ENSORLG00000030116) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842 ENSGT01030000234575.c.a.a.a.a.a.b.b.b Cichlidae ANCESTRAL SPECIES 9 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c ENSGT01030000234575.c.a.a.a.a.a.b.b.b Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a.c.b ENSGT00940000155176.o.a.c.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c.d.a.b ENSGT01030000234823.c.c.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a.c.b ENSGT00940000155176.o.a.c.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c.d.a.b ENSGT01030000234823.c.c.a ENSGT00940000175694 Haplochromini ANCESTRAL SPECIES 6 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a.c.b ENSGT00940000155176.o.a.c.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c.d.a.b ENSGT01030000234823.c.c.a ENSGT00940000175694 Haplochromini_A ANCESTRAL SPECIES 27 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a.c.b ENSGT00940000155176.o.a.c.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c.d.a.b ENSGT01030000234823.c.d.b ENSGT00940000169377 Haplochromini_B ANCESTRAL SPECIES 6 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a.c.b ENSGT00940000155176.o.a.c.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234823.c.d.a.b.c ENSGT01080000257465.d.b ENSGT01030000234823.d.b.a ENSGT01030000234823.c.d.b Eastern happy MODERN SPECIES 2 lysmd1 (ENSACLG00000004548) scnm1 (ENSACLG00000004532) tmod4 (ENSACLG00000004494) mcl1b (ENSACLG00000004468) ensab (ENSACLG00000004436) hormad1 (ENSACLG00000004367) onecutl (ENSACLG00000004356) ctsk (ENSACLG00000004303) CTSS (ENSACLG00000004271) CTSS (ENSACLG00000004206) ctsk (ENSACLG00000004182) ENSACLG00000004175 si:ch211-113g11.6 (ENSACLG00000004099) tlr18 (ENSACLG00000004092) s100a1 (ENSACLG00000004090) prdm1a (ENSACLG00000004069) #22 atg5 (ENSACLG00000004045) #23 dctn3 (ENSACLG00000004024) nt5c3a (ENSACLG00000004006) BBS9 (ENSACLG00000003964) bmper (ENSACLG00000003759) eaf1 (ENSACLG00000003717) mettl6 (ENSACLG00000003697) ENSACLG00000003687 ENSACLG00000003677 ENSACLG00000003670 sh3bp5b (ENSACLG00000003647) capn7 (ENSACLG00000003591) ENSACLG00000003568 ENSACLG00000003551 ENSACLG00000003529 Zebra mbuna MODERN SPECIES 1093 si:ch211-113g11.6 (ENSMZEG00005010668) lingo4b (ENSMZEG00005010662) ctsk (ENSMZEG00005010652) CTSS (ENSMZEG00005010627) CTSS (ENSMZEG00005010606) onecutl (ENSMZEG00005010592) hormad1 (ENSMZEG00005010578) ensab (ENSMZEG00005010566) mcl1b (ENSMZEG00005010555) tmod4 (ENSMZEG00005010537) scnm1 (ENSMZEG00005010530) lysmd1 (ENSMZEG00005010516) tnfaip8l2b (ENSMZEG00005010501) tlr18 (ENSMZEG00005009916) s100a1 (ENSMZEG00005009900) prdm1a (ENSMZEG00005009887) #22 atg5 (ENSMZEG00005009872) #23 dctn3 (ENSMZEG00005009861) nt5c3a (ENSMZEG00005009846) BBS9 (ENSMZEG00005009799) bmper (ENSMZEG00005009743) eaf1 (ENSMZEG00005009723) mettl6 (ENSMZEG00005009711) ENSMZEG00005009700 ENSMZEG00005009694 sh3bp5b (ENSMZEG00005009661) capn7 (ENSMZEG00005009562) ENSMZEG00005009544 ENSMZEG00005009534 ENSMZEG00005009521 ENSMZEG00005009491 P. nyererei MODERN SPECIES 385 tnfaip8l2b (ENSPNYG00000012690) lysmd1 (ENSPNYG00000012675) scnm1 (ENSPNYG00000012651) tmod4 (ENSPNYG00000012626) mcl1b (ENSPNYG00000012608) ensab (ENSPNYG00000012553) hormad1 (ENSPNYG00000012533) onecutl (ENSPNYG00000012515) ENSPNYG00000012500 CTSS (ENSPNYG00000012465) ctsk (ENSPNYG00000012361) lingo4b (ENSPNYG00000012341) si:ch211-113g11.6 (ENSPNYG00000012306) tlr18 (ENSPNYG00000012225) s100a1 (ENSPNYG00000012186) prdm1a (ENSPNYG00000012159) #22 atg5 (ENSPNYG00000012132) #23 dctn3 (ENSPNYG00000012115) ENSPNYG00000012099 nt5c3a (ENSPNYG00000012070) BBS9 (ENSPNYG00000012007) bmper (ENSPNYG00000011961) eaf1 (ENSPNYG00000011950) mettl6 (ENSPNYG00000011923) ENSPNYG00000011910 ENSPNYG00000011899 sh3bp5b (ENSPNYG00000011861) capn7 (ENSPNYG00000011779) ENSPNYG00000011752 ENSPNYG00000011736 ENSPNYG00000011718 Burton s mouthbrooder MODERN SPECIES 376 tnfaip8l2b (ENSHBUG00000015058) lysmd1 (ENSHBUG00000015048) scnm1 (ENSHBUG00000015034) tmod4 (ENSHBUG00000015024) mcl1b (ENSHBUG00000014982) ensab (ENSHBUG00000014968) hormad1 (ENSHBUG00000014954) onecutl (ENSHBUG00000014934) CTSS (ENSHBUG00000014918) CTSS (ENSHBUG00000014897) ctsk (ENSHBUG00000014890) lingo4b (ENSHBUG00000014864) si:ch211-113g11.6 (ENSHBUG00000014856) tlr18 (ENSHBUG00000014781) s100a1 (ENSHBUG00000014792) prdm1a (ENSHBUG00000014772) #22 atg5 (ENSHBUG00000014752) #23 dctn3 (ENSHBUG00000014734) ENSHBUG00000014709 nt5c3a (ENSHBUG00000014699) BBS9 (ENSHBUG00000014669) bmper (ENSHBUG00000014643) eaf1 (ENSHBUG00000014577) mettl6 (ENSHBUG00000014557) ENSHBUG00000014500 ENSHBUG00000014483 sh3bp5b (ENSHBUG00000014457) capn7 (ENSHBUG00000014393) Lyretail cichlid MODERN SPECIES 311 sema6e (ENSNBRG00000014053) tnfaip8l2b (ENSNBRG00000014040) lysmd1 (ENSNBRG00000014027) scnm1 (ENSNBRG00000014008) tmod4 (ENSNBRG00000013985) mcl1b (ENSNBRG00000013968) ensab (ENSNBRG00000013955) ENSNBRG00000013946 onecutl (ENSNBRG00000013936) CTSS (ENSNBRG00000013888) CTSS (ENSNBRG00000013767) lingo4b (ENSNBRG00000013745) si:ch211-113g11.6 (ENSNBRG00000013721) tlr18 (ENSNBRG00000013708) s100a1 (ENSNBRG00000013649) prdm1a (ENSNBRG00000013627) #22 atg5 (ENSNBRG00000013609) #23 dctn3 (ENSNBRG00000013591) nt5c3a (ENSNBRG00000013567) BBS9 (ENSNBRG00000013540) bmper (ENSNBRG00000013516) eaf1 (ENSNBRG00000013504) mettl6 (ENSNBRG00000013484) ENSNBRG00000013474 ENSNBRG00000013464 sh3bp5b (ENSNBRG00000013436) capn7 (ENSNBRG00000013396) ENSNBRG00000013381 ENSNBRG00000013367 ENSNBRG00000013356 ENSNBRG00000013341 Nile tilapia MODERN SPECIES 2 sema6e (ENSONIG00000006638) tnfaip8l2 (ENSONIG00000033284) lysmd1 (ENSONIG00000006648) scnm1 (ENSONIG00000006651) tmod4 (ENSONIG00000006656) mcl1b (ENSONIG00000006658) ensab (ENSONIG00000006660) hormad1 (ENSONIG00000006663) onecutl (ENSONIG00000006669) ctss2.1 (ENSONIG00000033903) ctsk (ENSONIG00000027954) lingo4b (ENSONIG00000020478) si:ch211-113g11.6 (ENSONIG00000006683) tlr18 (ENSONIG00000006684) s100a1 (ENSONIG00000035107) prdm1a (ENSONIG00000006687) #22 atg5 (ENSONIG00000041876) #23 dctn3 (ENSONIG00000037717) ENSONIG00000006701 nt5c3a (ENSONIG00000006702) BBS9 (ENSONIG00000006705) bmper (ENSONIG00000006713) eaf1 (ENSONIG00000006717) mettl6 (ENSONIG00000006718) ENSONIG00000034467 ENSONIG00000037098 sh3bp5 (ENSONIG00000006722) capn7 (ENSONIG00000006727) ENSONIG00000006734 ENSONIG00000040598 ENSONIG00000031023 Midas cichlid MODERN SPECIES 631 ctsk (ENSACIG00000005713) tlr18 (ENSACIG00000005736) si:ch211-113g11.6 (ENSACIG00000005833) s100a1 (ENSACIG00000005865) prdm1a (ENSACIG00000005898) #22 atg5 (ENSACIG00000006042) #23 dctn3 (ENSACIG00000006057) nt5c3a (ENSACIG00000006075) BBS9 (ENSACIG00000006095) bmper (ENSACIG00000006157) eaf1 (ENSACIG00000006209) mettl6 (ENSACIG00000006254) ENSACIG00000006275 ENSACIG00000006288 ENSACIG00000006394 sh3bp5b (ENSACIG00000006417) capn7 (ENSACIG00000006442) ENSACIG00000006488 ENSACIG00000006504 ENSACIG00000006520 Pomacentridae ANCESTRAL SPECIES 25 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842.a ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 ENSGT00940000159463.n.a Pomacentridae_A ANCESTRAL SPECIES 16 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766.i #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842.a ENSGT01100000263842.b ENSGT00940000169377 ENSGT00940000159463.n.a Amphiprion ANCESTRAL SPECIES 1 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766.i #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000154856.A.a.c.a.a ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01100000263842.a ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377 Clown anemonefish MODERN SPECIES 1002 rbm22 (ENSAOCG00000007179) ENSAOCG00000007126 ENSAOCG00000007116 ENSAOCG00000007101 arl3l2 (ENSAOCG00000007094) rgs14a (ENSAOCG00000002504) SLC34A1 (ENSAOCG00000000369) adra2da (ENSAOCG00000006916) ENSAOCG00000006907 cnot6b (ENSAOCG00000006893) ADAMTS2 (ENSAOCG00000006846) ENSAOCG00000000350 ENSAOCG00000000346 gfpt2 (ENSAOCG00000006756) ENSAOCG00000006659 prdm1a (ENSAOCG00000006625) #22 atg5 (ENSAOCG00000006597) #23 dctn3 (ENSAOCG00000006565) nt5c3a (ENSAOCG00000000313) BBS9 (ENSAOCG00000006537) bmper (ENSAOCG00000006490) eaf1 (ENSAOCG00000006440) mettl6 (ENSAOCG00000006409) c6ast1 (ENSAOCG00000006377) ENSAOCG00000006354 ENSAOCG00000006337 sh3bp5b (ENSAOCG00000006327) capn7 (ENSAOCG00000006292) ENSAOCG00000006234 ENSAOCG00000006213 Orange clownfish MODERN SPECIES 21 tnfaip8l2b (ENSAPEG00000001769) lysmd1 (ENSAPEG00000001780) scnm1 (ENSAPEG00000001789) tmod4 (ENSAPEG00000001803) mcl1b (ENSAPEG00000001835) ensab (ENSAPEG00000001851) hormad1 (ENSAPEG00000001865) onecutl (ENSAPEG00000001873) ctss2.1 (ENSAPEG00000001914) ctsk (ENSAPEG00000001951) ENSAPEG00000001965 lingo4b (ENSAPEG00000001981) si:ch211-113g11.6 (ENSAPEG00000001988) s100a1 (ENSAPEG00000002023) tlr18 (ENSAPEG00000002044) prdm1a (ENSAPEG00000002132) #22 atg5 (ENSAPEG00000002178) #23 dctn3 (ENSAPEG00000002221) nt5c3a (ENSAPEG00000002232) BBS9 (ENSAPEG00000002282) bmper (ENSAPEG00000002334) eaf1 (ENSAPEG00000002400) mettl6 (ENSAPEG00000002434) c6ast1 (ENSAPEG00000002457) ENSAPEG00000002495 ENSAPEG00000002522 sh3bp5b (ENSAPEG00000002537) capn7 (ENSAPEG00000002587) ENSAPEG00000002670 ENSAPEG00000002679 ENSAPEG00000002691 Spiny chromis MODERN SPECIES 1479 prdm1a (ENSAPOG00000003930) #22 atg5 (ENSAPOG00000003955) #23 dctn3 (ENSAPOG00000004090) Bicolor damselfish MODERN SPECIES 820 ENSSPAG00000019424 ctsk (ENSSPAG00000019439) tlr18 (ENSSPAG00000019447) si:ch211-113g11.6 (ENSSPAG00000019557) s100a1 (ENSSPAG00000019582) prdm1a (ENSSPAG00000019594) #22 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f Tetraodontidae ANCESTRAL SPECIES 52 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00940000169377.f ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343.a.b Fugu MODERN SPECIES 19 scnm1 (ENSTRUG00000000984) ENSTRUG00000032709 tmod4 (ENSTRUG00000000784) mcl1b (ENSTRUG00000033310) ensab (ENSTRUG00000000745) hormad1 (ENSTRUG00000027948) onecutl (ENSTRUG00000000664) ctss2.1 (ENSTRUG00000000566) ctsk (ENSTRUG00000000525) lingo4b (ENSTRUG00000000507) ENSTRUG00000020125 si:ch211-113g11.6 (ENSTRUG00000000497) tlr18 (ENSTRUG00000000441) s100a1 (ENSTRUG00000032438) ENSTRUG00000020182 prdm1a (ENSTRUG00000000404) #22 atg5 (ENSTRUG00000000354) #23 dctn3 (ENSTRUG00000000343) nt5c3a (ENSTRUG00000000318) BBS9 (ENSTRUG00000000291) bmper (ENSTRUG00000003104) eaf1 (ENSTRUG00000029596) mettl6 (ENSTRUG00000003971) sh3bp5b (ENSTRUG00000004092) capn7 (ENSTRUG00000004414) ENSTRUG00000004926 mef2d (ENSTRUG00000004958) rhbg (ENSTRUG00000005400) hapln2 (ENSTRUG00000005987) bcan (ENSTRUG00000006231) isg20l2 (ENSTRUG00000021768) Tetraodon MODERN SPECIES 26 ISG20L2 (ENSTNIG00000012980) bcan (ENSTNIG00000012981) hapln2 (ENSTNIG00000012982) rhbg (ENSTNIG00000012983) mef2d (ENSTNIG00000012984) ENSTNIG00000012985 capn7 (ENSTNIG00000012986) sh3bp5b (ENSTNIG00000012987) mettl6 (ENSTNIG00000012988) eaf1 (ENSTNIG00000012989) bmper (ENSTNIG00000012990) BBS9 (ENSTNIG00000005257) nt5c3a (ENSTNIG00000005258) dctn3 (ENSTNIG00000005259) atg5 (ENSTNIG00000005260) #23 prdm1a (ENSTNIG00000003926) #22 nme2a (ENSTNIG00000003155) MBTD1 (ENSTNIG00000003156) tdrkh (ENSTNIG00000003157) TMEM94 (ENSTNIG00000003158) llgl2 (ENSTNIG00000002746) galk1 (ENSTNIG00000002747) KCTD21 (ENSTNIG00000000545) ENSTNIG00000006217 bms1 (ENSTNIG00000006216) mtr (ENSTNIG00000005701) ENSTNIG00000005702 ENSTNIG00000019568 ENSTNIG00000019380 ENSTNIG00000019381 ENSTNIG00000000519 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f Ballan wrasse MODERN SPECIES 555 prdm1a (ENSLBEG00000012244) #22 atg5 (ENSLBEG00000012282) #23 dctn3 (ENSLBEG00000012326) nt5c3a (ENSLBEG00000012360) BBS9 (ENSLBEG00000012387) Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f Perciformes ANCESTRAL SPECIES 3 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00940000169377.f ENSGT00940000159463.n.a Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01040000240903 ENSGT01010000225426 ENSGT00940000169377.f ENSGT00940000159463.n.a Lumpfish MODERN SPECIES 7 tmod4 (ENSCLMG00005007274) mcl1b (ENSCLMG00005007272) ensab (ENSCLMG00005007271) ENSCLMG00005007270 hormad1 (ENSCLMG00005007269) onecutl (ENSCLMG00005007268) ctss2.1 (ENSCLMG00005007267) ENSCLMG00005007265 ENSCLMG00005007264 ctsk (ENSCLMG00005007263) lingo4b (ENSCLMG00005007261) ENSCLMG00005007259 si:ch211-113g11.6 (ENSCLMG00005007256) tlr18 (ENSCLMG00005007255) s100a1 (ENSCLMG00005007254) prdm1a (ENSCLMG00005007252) #22 atg5 (ENSCLMG00005007247) #23 dctn3 (ENSCLMG00005007246) nt5c3a (ENSCLMG00005007243) ENSCLMG00005007242 ENSCLMG00005007240 BBS9 (ENSCLMG00005007227) sh3bp5b (ENSCLMG00005007222) capn7 (ENSCLMG00005007177) ENSCLMG00005007176 ENSCLMG00005007175 ENSCLMG00005007174 ENSCLMG00005007172 mef2d (ENSCLMG00005007162) bmper (ENSCLMG00005007159) ENSCLMG00005007157 Stickleback MODERN SPECIES 86 ENSGACG00000001819 MEGF8 (ENSGACG00000001806) trim35-28 (ENSGACG00000001803) CXCR3 (ENSGACG00000001790) CXCR3 (ENSGACG00000001789) cxcr3.2 (ENSGACG00000001783) ENSGACG00000001787 dhx16 (ENSGACG00000001768) rnf183 (ENSGACG00000001765) si:ch211-113g11.6 (ENSGACG00000001754) tlr18 (ENSGACG00000001745) s100a1 (ENSGACG00000001741) prdm1a (ENSGACG00000001740) #22 atg5 (ENSGACG00000001732) #23 dctn3 (ENSGACG00000001721) nt5c3a (ENSGACG00000001720) capn7 (ENSGACG00000001711) sh3bp5b (ENSGACG00000001704) mettl6 (ENSGACG00000001695) eaf1 (ENSGACG00000001692) bmper (ENSGACG00000001688) Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000158641.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00940000169377.f ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a Pike perch MODERN SPECIES 148 lysmd1 (ENSSLUG00000007446) scnm1 (ENSSLUG00000007449) tmod4 (ENSSLUG00000007452) mcl1b (ENSSLUG00000007468) ensab (ENSSLUG00000007470) ENSSLUG00000007472 hormad1 (ENSSLUG00000007477) onecutl (ENSSLUG00000007486) ctss2.1 (ENSSLUG00000007493) ctsk (ENSSLUG00000007506) lingo4b (ENSSLUG00000007513) si:ch211-113g11.6 (ENSSLUG00000007524) tlr18 (ENSSLUG00000007541) s100a1 (ENSSLUG00000007550) s100a1 (ENSSLUG00000007559) prdm1a (ENSSLUG00000007567) #22 atg5 (ENSSLUG00000007613) #23 dctn3 (ENSSLUG00000007642) ENSSLUG00000007650 nt5c3a (ENSSLUG00000007664) BBS9 (ENSSLUG00000007807) ENSSLUG00000007829 bmper (ENSSLUG00000007846) eaf1 (ENSSLUG00000008064) selenoh (ENSSLUG00000008069) mettl6 (ENSSLUG00000008072) ENSSLUG00000008075 ENSSLUG00000008082 ENSSLUG00000008084 sh3bp5b (ENSSLUG00000008090) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000169377.e Gilthead seabream MODERN SPECIES 8 mcl1b (ENSSAUG00010011087) ensab (ENSSAUG00010011089) hormad1 (ENSSAUG00010011090) onecutl (ENSSAUG00010011092) CTSS (ENSSAUG00010011098) ENSSAUG00010011115 CTSS (ENSSAUG00010011128) CTSS (ENSSAUG00010011147) CTSS (ENSSAUG00010011632) ctsk (ENSSAUG00010011634) lingo4b (ENSSAUG00010011635) si:ch211-113g11.6 (ENSSAUG00010011636) tlr18 (ENSSAUG00010011637) ENSSAUG00010011638 ENSSAUG00010011639 prdm1a (ENSSAUG00010011640) #22 atg5 (ENSSAUG00010011642) #23 dctn3 (ENSSAUG00010011644) nt5c3a (ENSSAUG00010011646) BBS9 (ENSSAUG00010011679) bmper (ENSSAUG00010011694) eaf1 (ENSSAUG00010012946) mettl6 (ENSSAUG00010012958) ENSSAUG00010013013 sh3bp5b (ENSSAUG00010013015) capn7 (ENSSAUG00010013017) ENSSAUG00010013022 ENSSAUG00010013023 ENSSAUG00010013025 ENSSAUG00010013027 ENSSAUG00010013030 Eupercaria_incertae_sedis ANCESTRAL SPECIES 44 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b.eb ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485.n ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT01090000259997.a.d.b.b.a ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000169377.e Large yellow croaker MODERN SPECIES 484 ENSLCRG00005002859 tnfaip8l2b (ENSLCRG00005002856) lysmd1 (ENSLCRG00005002855) scnm1 (ENSLCRG00005002853) tmod4 (ENSLCRG00005002743) mcl1b (ENSLCRG00005002727) ensab (ENSLCRG00005002721) hormad1 (ENSLCRG00005002719) onecutl (ENSLCRG00005002715) ctss2.1 (ENSLCRG00005002696) ctsk (ENSLCRG00005002683) lingo4b (ENSLCRG00005002681) si:ch211-113g11.6 (ENSLCRG00005002678) tlr18 (ENSLCRG00005002672) s100a1 (ENSLCRG00005002670) prdm1a (ENSLCRG00005002665) #22 atg5 (ENSLCRG00005002599) #23 dctn3 (ENSLCRG00005002585) nt5c3a (ENSLCRG00005002539) ENSLCRG00005002520 bmper (ENSLCRG00005001095) eaf1 (ENSLCRG00005001073) mettl6 (ENSLCRG00005001062) ENSLCRG00005001057 ENSLCRG00005001055 ENSLCRG00005001051 sh3bp5b (ENSLCRG00005001050) capn7 (ENSLCRG00005000992) ENSLCRG00005000979 ENSLCRG00005000975 ENSLCRG00005000969 European seabass MODERN SPECIES 6 tnfaip8l2b (ENSDLAG00005028605) lysmd1 (ENSDLAG00005033723) scnm1 (ENSDLAG00005014665) tmod4 (ENSDLAG00005014603) mcl1b (ENSDLAG00005032322) ensab (ENSDLAG00005033273) hormad1 (ENSDLAG00005014542) onecutl (ENSDLAG00005034028) ctss2.1 (ENSDLAG00005014499) ctsk (ENSDLAG00005014479) lingo4b (ENSDLAG00005029284) si:ch211-113g11.6 (ENSDLAG00005014425) tlr18 (ENSDLAG00005014412) ENSDLAG00005014391 ENSDLAG00005033687 ENSDLAG00005014286 #22 ENSDLAG00005032041 #23 ENSDLAG00005014107 ENSDLAG00005014103 ENSDLAG00005013916 ENSDLAG00005016546 EAF1 (ENSDLAG00005030810) METTL6 (ENSDLAG00005016450) ENSDLAG00005016416 ENSDLAG00005027193 SH3BP5 (ENSDLAG00005028810) ENSDLAG00005019247 CAPN7 (ENSDLAG00005034519) ENSDLAG00005005534 ENSDLAG00005033477 ENSDLAG00005016246 Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000169377.e Carangaria ANCESTRAL SPECIES 1 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000169377.e ENSGT00940000159463.n.a Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00940000177749 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00940000169377.f ENSGT00940000169377.e ENSGT00940000159463.n.a Turbot MODERN SPECIES 7 tnfaip8l2b (ENSSMAG00000016906) lysmd1 (ENSSMAG00000016896) scnm1 (ENSSMAG00000016883) tmod4 (ENSSMAG00000016826) mcl1b (ENSSMAG00000016794) ensab (ENSSMAG00000016785) hormad1 (ENSSMAG00000016764) onecutl (ENSSMAG00000016757) CTSS (ENSSMAG00000016731) CTSK (ENSSMAG00000016710) lingo4b (ENSSMAG00000015595) si:ch211-113g11.6 (ENSSMAG00000015789) tlr18 (ENSSMAG00000015780) s100a1 (ENSSMAG00000021648) ENSSMAG00000015761 ENSSMAG00000031850 #22 atg5 (ENSSMAG00000016690) #23 ENSSMAG00000016682 ENSSMAG00000023546 ENSSMAG00000022322 ENSSMAG00000030505 ENSSMAG00000016609 ENSSMAG00000016553 ENSSMAG00000016525 METTL6 (ENSSMAG00000016506) ENSSMAG00000016497 ENSSMAG00000016453 CAPN7 (ENSSMAG00000016349) ENSSMAG00000024955 ENSSMAG00000016321 mef2d (ENSSMAG00000016121) Tongue sole MODERN SPECIES 4 lysmd1 (ENSCSEG00000009541) scnm1 (ENSCSEG00000009547) tmod4 (ENSCSEG00000009560) mcl1b (ENSCSEG00000009577) ensab (ENSCSEG00000009592) hormad1 (ENSCSEG00000009601) onecutl (ENSCSEG00000009617) ctss2.1 (ENSCSEG00000009625) ctsk (ENSCSEG00000009635) lingo4b (ENSCSEG00000009646) si:ch211-113g11.6 (ENSCSEG00000009649) tlr18 (ENSCSEG00000009671) s100a1 (ENSCSEG00000009675) s100a1 (ENSCSEG00000009678) ENSCSEG00000009685 prdm1a (ENSCSEG00000009707) #22 atg5 (ENSCSEG00000009735) #23 dctn3 (ENSCSEG00000009765) ENSCSEG00000009780 nt5c3a (ENSCSEG00000009781) ENSCSEG00000009794 bmper (ENSCSEG00000009852) eaf1 (ENSCSEG00000009900) mettl6 (ENSCSEG00000009907) ENSCSEG00000009920 sh3bp5b (ENSCSEG00000009932) capn7 (ENSCSEG00000009959) ENSCSEG00000010035 mef2d (ENSCSEG00000010052) rhbg (ENSCSEG00000010158) bcan (ENSCSEG00000010178) Carangaria_A ANCESTRAL SPECIES 27 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803.j ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a Barramundi perch MODERN SPECIES 6 ENSLCAG00010004631 tnfaip8l2b (ENSLCAG00010004628) lysmd1 (ENSLCAG00010004624) scnm1 (ENSLCAG00010004622) tmod4 (ENSLCAG00010004620) mcl1b (ENSLCAG00010004617) ensab (ENSLCAG00010004613) hormad1 (ENSLCAG00010004609) onecutl (ENSLCAG00010004605) ctss2.1 (ENSLCAG00010004540) ctsk (ENSLCAG00010004516) lingo4b (ENSLCAG00010004514) si:ch211-113g11.6 (ENSLCAG00010004510) tlr18 (ENSLCAG00010004507) ENSLCAG00010004506 prdm1a (ENSLCAG00010004496) #22 atg5 (ENSLCAG00010004479) #23 dctn3 (ENSLCAG00010004469) ENSLCAG00010004466 nt5c3a (ENSLCAG00010004454) ENSLCAG00010004447 Seriola ANCESTRAL SPECIES 58 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759.z ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT01060000248695 ENSGT00390000012959.b ENSGT00390000000803.j ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00390000018500.b.b.a Greater amberjack MODERN SPECIES 40 ENSSDUG00000001764 tnfaip8l2b (ENSSDUG00000001836) lysmd1 (ENSSDUG00000001844) scnm1 (ENSSDUG00000001853) tmod4 (ENSSDUG00000001906) mcl1b (ENSSDUG00000001927) ensab (ENSSDUG00000001945) hormad1 (ENSSDUG00000001961) onecutl (ENSSDUG00000002061) ctss2.1 (ENSSDUG00000002074) ctsk (ENSSDUG00000002105) lingo4b (ENSSDUG00000002129) si:ch211-113g11.6 (ENSSDUG00000002139) tlr18 (ENSSDUG00000002178) s100a1 (ENSSDUG00000002240) prdm1a (ENSSDUG00000002293) #22 atg5 (ENSSDUG00000002406) #23 dctn3 (ENSSDUG00000002445) nt5c3a (ENSSDUG00000002461) BBS9 (ENSSDUG00000002501) bmper (ENSSDUG00000002530) eaf1 (ENSSDUG00000002579) mettl6 (ENSSDUG00000002600) ENSSDUG00000002621 sh3bp5b (ENSSDUG00000002627) Yellowtail amberjack MODERN SPECIES 3102 tnfaip8l2b (ENSSLDG00000013178) lysmd1 (ENSSLDG00000013182) scnm1 (ENSSLDG00000013191) tmod4 (ENSSLDG00000013202) mcl1b (ENSSLDG00000013220) ensab (ENSSLDG00000013229) ENSSLDG00000013237 onecutl (ENSSLDG00000013250) ctss2.1 (ENSSLDG00000013260) ctsk (ENSSLDG00000013277) lingo4b (ENSSLDG00000013296) si:ch211-113g11.6 (ENSSLDG00000013322) tlr18 (ENSSLDG00000013390) ENSSLDG00000013402 ENSSLDG00000013424 prdm1a (ENSSLDG00000013463) #22 atg5 (ENSSLDG00000013590) #23 dctn3 (ENSSLDG00000013614) ENSSLDG00000013633 nt5c3a (ENSSLDG00000013648) BBS9 (ENSSLDG00000013678) bmper (ENSSLDG00000013736) eaf1 (ENSSLDG00000013768) mettl6 (ENSSLDG00000013783) ENSSLDG00000013796 sh3bp5b (ENSSLDG00000013807) Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000163785.a.a.b ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759 ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475.fb.b ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a Anabantoidei ANCESTRAL SPECIES 3 ENSGT00390000003488.b.b ENSGT00940000160002 ENSGT00390000010811 ENSGT00940000158734 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000018130.a.a.a ENSGT00950000183103.d.a.a.g ENSGT00940000155176.o.a ENSGT00940000157759.v ENSGT00940000154996.a.a.a ENSGT00940000165314 ENSGT00940000164422 ENSGT00940000160475.fb.b ENSGT00980000200840 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00940000174429 ENSGT00940000174998 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT01030000234575.c.a.a.a.a.a.b.b.b ENSGT00940000169377.f ENSGT00940000159463.n.a ENSGT00950000182844.b.b.a Climbing perch DUPLICATION Climbing perch MODERN SPECIES 7 scnm1 (ENSATEG00000000394) tmod4 (ENSATEG00000000353) mcl1b (ENSATEG00000000337) ensab (ENSATEG00000000332) ENSATEG00000000278 hormad1 (ENSATEG00000029949) onecutl (ENSATEG00000000264) ctss2.1 (ENSATEG00000000217) ctsk (ENSATEG00000000210) lingo4b (ENSATEG00000000204) si:ch211-113g11.6 (ENSATEG00000000146) tlr18 (ENSATEG00000000051) s100a1 (ENSATEG00000021127) ENSATEG00000021116 ENSATEG00000021104 ENSATEG00000021017 #22 ENSATEG00000020977 #22 ENSATEG00000020950 #23 ENSATEG00000029909 ENSATEG00000026516 ENSATEG00000020917 ENSATEG00000020854 EAF1 (ENSATEG00000020825) METTL6 (ENSATEG00000020794) ENSATEG00000020781 ENSATEG00000020760 SH3BP5 (ENSATEG00000020736) CAPN7 (ENSATEG00000020680) ENSATEG00000020633 ENSATEG00000028643 mef2d (ENSATEG00000020539) Climbing perch MODERN SPECIES 7 tmod4 (ENSATEG00000000353) mcl1b (ENSATEG00000000337) ensab (ENSATEG00000000332) ENSATEG00000000278 hormad1 (ENSATEG00000029949) onecutl (ENSATEG00000000264) ctss2.1 (ENSATEG00000000217) ctsk (ENSATEG00000000210) lingo4b (ENSATEG00000000204) si:ch211-113g11.6 (ENSATEG00000000146) tlr18 (ENSATEG00000000051) s100a1 (ENSATEG00000021127) ENSATEG00000021116 ENSATEG00000021104 ENSATEG00000021017 #22 ENSATEG00000020977 #22 ENSATEG00000020950 #23 ENSATEG00000029909 ENSATEG00000026516 ENSATEG00000020917 ENSATEG00000020854 EAF1 (ENSATEG00000020825) METTL6 (ENSATEG00000020794) ENSATEG00000020781 ENSATEG00000020760 SH3BP5 (ENSATEG00000020736) CAPN7 (ENSATEG00000020680) ENSATEG00000020633 ENSATEG00000028643 mef2d (ENSATEG00000020539) rhbg (ENSATEG00000020457) Siamese fighting fish MODERN SPECIES 7 tmod4 (ENSBSLG00000008066) mcl1b (ENSBSLG00000008045) ensab (ENSBSLG00000008038) hormad1 (ENSBSLG00000008018) onecutl (ENSBSLG00000008006) ctss2.1 (ENSBSLG00000007992) ctsk (ENSBSLG00000007966) lingo4b (ENSBSLG00000007962) si:ch211-113g11.6 (ENSBSLG00000007894) tlr18 (ENSBSLG00000007875) s100a1 (ENSBSLG00000007829) s100a1 (ENSBSLG00000007808) ENSBSLG00000022024 ENSBSLG00000022014 ENSBSLG00000022010 prdm1a (ENSBSLG00000021991) #22 atg5 (ENSBSLG00000021955) #23 dctn3 (ENSBSLG00000021921) nt5c3a (ENSBSLG00000021886) BBS9 (ENSBSLG00000021840) bmper (ENSBSLG00000021286) eaf1 (ENSBSLG00000021069) mettl6 (ENSBSLG00000021012) sh3bp5b (ENSBSLG00000020958) capn7 (ENSBSLG00000020213) ENSBSLG00000020209 rhbg (ENSBSLG00000019853) hapln2 (ENSBSLG00000019778) bcan (ENSBSLG00000019602) ISG20L2 (ENSBSLG00000019585) mettl25b (ENSBSLG00000019575) Zig-zag eel MODERN SPECIES 7 scnm1 (ENSMAMG00000012279) tmod4 (ENSMAMG00000012308) mcl1b (ENSMAMG00000012338) ensab (ENSMAMG00000027952) hormad1 (ENSMAMG00000012350) onecutl (ENSMAMG00000012369) ctss2.1 (ENSMAMG00000025508) ctsk (ENSMAMG00000012398) lingo4b (ENSMAMG00000012677) si:ch211-113g11.6 (ENSMAMG00000012682) tlr18 (ENSMAMG00000012711) s100a1 (ENSMAMG00000012730) ENSMAMG00000012751 ENSMAMG00000013606 ENSMAMG00000028216 ENSMAMG00000013620 #22 ENSMAMG00000013638 #23 ENSMAMG00000013678 ENSMAMG00000013688 ENSMAMG00000013737 ENSMAMG00000013779 ENSMAMG00000013847 ENSMAMG00000013872 ENSMAMG00000027429 ENSMAMG00000013899 ENSMAMG00000028220 ENSMAMG00000013913 ENSMAMG00000013978 ENSMAMG00000014000 ENSMAMG00000014035 ENSMAMG00000027382 Tiger tail seahorse MODERN SPECIES 100 tnfaip8l2b (ENSHCOG00000013051) lysmd1 (ENSHCOG00000013057) scnm1 (ENSHCOG00000013064) tmod4 (ENSHCOG00000013091) mcl1b (ENSHCOG00000013101) ensab (ENSHCOG00000013110) hormad1 (ENSHCOG00000000648) onecutl (ENSHCOG00000013140) ENSHCOG00000013154 ctsk (ENSHCOG00000013303) ENSHCOG00000013320 lingo4b (ENSHCOG00000000383) si:ch211-113g11.6 (ENSHCOG00000013374) tlr18 (ENSHCOG00000013391) ENSHCOG00000013404 prdm1a (ENSHCOG00000013422) #22 atg5 (ENSHCOG00000000649) #23 dctn3 (ENSHCOG00000013447) nt5c3a (ENSHCOG00000013469) BBS9 (ENSHCOG00000000662) bmper (ENSHCOG00000013598) eaf1 (ENSHCOG00000013619) mettl6 (ENSHCOG00000013637) sh3bp5b (ENSHCOG00000013639) capn7 (ENSHCOG00000013697) ENSHCOG00000013736 mef2d (ENSHCOG00000013771) rhbg (ENSHCOG00000013802) hapln2 (ENSHCOG00000013840) bcan (ENSHCOG00000013875) isg20l2 (ENSHCOG00000013913) Pinecone sodierfish MODERN SPECIES 7 ENSMMDG00005018536 ENSMMDG00005018539 ENSMMDG00005018541 ENSMMDG00005018542 ENSMMDG00005018543 capn7 (ENSMMDG00005018547) sh3bp5b (ENSMMDG00005018552) ENSMMDG00005018555 ENSMMDG00005010213 mettl6 (ENSMMDG00005010215) ENSMMDG00005010217 sri (ENSMMDG00005010220) ENSMMDG00005010224 ENSMMDG00005010226 ENSMMDG00005010228 prdm1a (ENSMMDG00005010231) #22 atg5 (ENSMMDG00005010237) #23 dctn3 (ENSMMDG00005010244) ENSMMDG00005010245 nt5c3a (ENSMMDG00005010248) BBS9 (ENSMMDG00005010254) bmper (ENSMMDG00005010278) eaf1 (ENSMMDG00005011081) snrnp48 (ENSMMDG00005011083) zgc:113232 (ENSMMDG00005011090) ENSMMDG00005011104 ENSMMDG00005011109 wdr73 (ENSMMDG00005011113) pimr50 (ENSMMDG00005011118) plekhf2 (ENSMMDG00005011120) ENSMMDG00005011121 Cod MODERN SPECIES 2 ENSGMOG00000035014 ccne2 (ENSGMOG00000010677) ENSGMOG00000033511 tp53inp1 (ENSGMOG00000033246) nagpa (ENSGMOG00000010715) NDUFAF6 (ENSGMOG00000010727) plekhf2 (ENSGMOG00000004911) ENSGMOG00000017990 ENSGMOG00000036588 ENSGMOG00000017995 ENSGMOG00000022194 ENSGMOG00000028566 ENSGMOG00000018599 ENSGMOG00000018612 ENSGMOG00000032186 ENSGMOG00000028237 #22 ENSGMOG00000009722 #23 ENSGMOG00000036602 ENSGMOG00000009703 ENSGMOG00000027237 ENSGMOG00000030312 ENSGMOG00000015912 ENSGMOG00000035206 ENSGMOG00000024359 ENSGMOG00000028831 ENSGMOG00000015947 ENSGMOG00000036786 ENSGMOG00000015961 ENSGMOG00000009975 ENSGMOG00000036310 arl4aa (ENSGMOG00000020530) Protacanthopterygii ANCESTRAL SPECIES 12 ENSGT00390000018130.a.a.a ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b.`b ENSGT00940000158734 ENSGT00390000010811 ENSGT00940000160002 ENSGT00390000003488.b.a.b ENSGT00940000163785.a.a.b ENSGT00940000158641.a.b ENSGT00940000154412.B.a.b ENSGT00940000156794 ENSGT00940000157687 ENSGT00940000158130 ENSGT00390000011734 ENSGT00940000158741 ENSGT00940000154798.a.d.a #22 ENSGT00390000004766 #23 ENSGT00390000016210 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00390000017724.a.a ENSGT00940000156679 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00650000094921 ENSGT00390000017671.a.b ENSGT00940000166686 ENSGT00940000153979.B ENSGT00390000004886 ENSGT00940000167743 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 554 ENSGT00940000158741.d ENSGT00940000154798.a.d.a.i #22 ENSGT00390000004766.h #23 ENSGT00390000016210.r ENSGT00390000012959.b.f ENSGT00390000000803.g ENSGT00940000156485.p ENSGT00390000017724.a.a.p ENSGT00940000156679.c.a ENSGT00390000018500.b.b.a.c.b ENSGT00940000155892.l ENSGT01000000220276 ENSGT00940000153195.B.o ENSGT00390000017671.a.b.c ENSGT00390000004886.e ENSGT00940000167743.f ENSGT00510000051337.g.b.b Salmoninae_a ANCESTRAL SPECIES 43 ENSGT00940000163785.a.a.b.a.a ENSGT00940000158641.a.b.c.b ENSGT00940000154412.B.a.b.e ENSGT00940000156794.c ENSGT00940000157687.e.b ENSGT00940000158130.k ENSGT00390000011734.i ENSGT00440000034270.a.b.d ENSGT00940000156347.j.b ENSGT01060000248575.D.c.b.a.b.b.a.a.b.b ENSGT01060000248575.D.c.b.a.b.b.a.a.a.c ENSGT01060000248575.D.c.b.a.b.b.a.a.a.d ENSGT01060000248575.D.c.a.a ENSGT00530000063023.B.e.a ENSGT00940000158741.d ENSGT00940000154798.a.d.a.i #22 ENSGT00390000004766.h #23 ENSGT00390000016210.r ENSGT00390000012959.b.f ENSGT00390000000803.g ENSGT00940000156485.p ENSGT00390000017724.a.a.p ENSGT00940000156679.c.a ENSGT00390000018500.b.b.a.c.b ENSGT00390000018500.b.b.a.d ENSGT00940000155892.l ENSGT00650000094921.b ENSGT01000000220276 ENSGT00940000153195.B.o ENSGT00390000017671.a.b.c ENSGT00390000004886.e Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000163785.a.a.b.a.a ENSGT00940000163785.a.a.b.b ENSGT00940000158641.a.b.c.b ENSGT00940000154412.B.a.b.e ENSGT00940000156794.c ENSGT00940000157687.e.b ENSGT00940000158130.k ENSGT00390000011734.i ENSGT00440000034270.a.b.d ENSGT00440000034270.a.b.c ENSGT00940000156347.j.b ENSGT01060000248575.D.c.b.a.b.b.a.a.a.d ENSGT01060000248575.D.c.b.b.a.n.b ENSGT00530000063023.B.e.a ENSGT00940000158741.d ENSGT00940000154798.a.d.a.i #22 ENSGT00390000004766.h #23 ENSGT00390000016210.r ENSGT00390000012959.b.f ENSGT00390000000803.g ENSGT00940000156485.p ENSGT00390000017724.a.a.p ENSGT00940000156679.c.a ENSGT00390000018500.b.b.a.d.a ENSGT00940000155892.l ENSGT00650000094921.b ENSGT01000000220276 ENSGT00940000153195.B.o ENSGT01010000230102 ENSGT00390000017671.a.b.c ENSGT00390000004886.e Rainbow trout MODERN SPECIES 21 GABPB2 (ENSOMYG00000009761) ENSOMYG00000049625 PTPN23 (ENSOMYG00000009495) ENSOMYG00000062067 ENSOMYG00000054843 SCAP (ENSOMYG00000008989) ELP6 (ENSOMYG00000008757) CSPG5 (ENSOMYG00000008731) ENSOMYG00000058112 SMARCC1 (ENSOMYG00000007759) ENSOMYG00000006637 ENSOMYG00000067156 ENSOMYG00000005903 ENSOMYG00000005206 ENSOMYG00000005160 prdm1b (ENSOMYG00000005152) #22 ENSOMYG00000005098 #23 ENSOMYG00000005016 ENSOMYG00000004975 ENSOMYG00000004883 ENSOMYG00000004533 EAF1 (ENSOMYG00000003991) METTL6 (ENSOMYG00000003965) ENSOMYG00000076183 SH3BP5 (ENSOMYG00000003950) CAPN7 (ENSOMYG00000003911) ENSOMYG00000058202 ENSOMYG00000066446 ENSOMYG00000003771 ENSOMYG00000075057 ENSOMYG00000003472 Oncorhynchus_a ANCESTRAL SPECIES 39 ENSGT00940000160002.o ENSGT00390000003488.b.a.b.b ENSGT00940000163785.a.a.b.a.a ENSGT00940000158641.a.b.c.b ENSGT00940000154412.B.a.b.e ENSGT00940000156794.c ENSGT00940000157687.e.b ENSGT00940000158130.k ENSGT00390000011734.i ENSGT00440000034270.a.b.c ENSGT00940000156347.j.b ENSGT01060000248575.D.c.b.a.b.b.a.a.a.c ENSGT01060000248575.D.c.b.b.a.n.b ENSGT00530000063023.B.e.a ENSGT00940000158741.d ENSGT00940000154798.a.d.a.i #22 ENSGT00390000004766.h #23 ENSGT00390000016210.r ENSGT00390000012959.b.f ENSGT00390000000803.g ENSGT00940000156485.p ENSGT00390000017724.a.a.p ENSGT00940000156679.c.a ENSGT00390000018500.b.b.a.d.a ENSGT00940000155892.l ENSGT01000000220276 ENSGT00940000153195.B.o ENSGT01010000230102 ENSGT00390000017671.a.b.c ENSGT00390000004886.e ENSGT00940000167743.f Chinook salmon MODERN SPECIES 15 lysmd1 (ENSOTSG00005015705) TNFAIP8L2 (ENSOTSG00005015704) ENSOTSG00005015703 sema6e (ENSOTSG00005015293) ENSOTSG00005015284 ENSOTSG00005015280 ptpn23a (ENSOTSG00005012714) SCAP (ENSOTSG00005012691) ENSOTSG00005012685 ENSOTSG00005012686 ENSOTSG00005008278 ENSOTSG00005008259 ENSOTSG00005008256 dpy19l1l (ENSOTSG00005006519) tbx20 (ENSOTSG00005006511) prdm1a (ENSOTSG00005006510) #22 atg5 (ENSOTSG00005006509) #23 dctn3 (ENSOTSG00005006501) nt5c3a (ENSOTSG00005006498) prdm1a (ENSOTSG00005006496) #22 atg5 (ENSOTSG00005006495) #23 dctn3 (ENSOTSG00005006494) nt5c3a (ENSOTSG00005004893) ENSOTSG00005004887 ENSOTSG00005004886 zgc:153012 (ENSOTSG00005004884) ENSOTSG00005004882 ENSOTSG00005004881 eif4e2rs1 (ENSOTSG00005004880) nsd2 (ENSOTSG00005004875) ENSOTSG00005004872 Coho salmon MODERN SPECIES 11 lysmd1 (ENSOKIG00005022100) TNFAIP8L2 (ENSOKIG00005022090) ENSOKIG00005022077 ENSOKIG00005022066 sema6e (ENSOKIG00005021890) ENSOKIG00005021842 gabpb2b (ENSOKIG00005021834) ptpn23a (ENSOKIG00005018013) SCAP (ENSOKIG00005017738) elp6 (ENSOKIG00005017704) SMARCC1 (ENSOKIG00005014834) ENSOKIG00005014726 ENSOKIG00005014712 ENSOKIG00005014190 tbx20 (ENSOKIG00005014125) prdm1a (ENSOKIG00005014109) #22 atg5 (ENSOKIG00005014084) #23 dctn3 (ENSOKIG00005014070) NT5C3A (ENSOKIG00005013269) BBS9 (ENSOKIG00005013199) BMPER (ENSOKIG00005012310) EAF1 (ENSOKIG00005012233) mettl6 (ENSOKIG00005012216) sh3bp5b (ENSOKIG00005012197) capn7 (ENSOKIG00005011735) bms1 (ENSOKIG00005011394) ENSOKIG00005011359 herpud2 (ENSOKIG00005011348) snrnp48 (ENSOKIG00005011322) ENSOKIG00005011307 ENSOKIG00005011279 Salmo ANCESTRAL SPECIES 32 ENSGT00940000160002.o ENSGT00390000003488.b.a.b.b ENSGT00940000163785.a.a.b.a.a ENSGT00940000158641.a.b.c.b ENSGT00940000154412.B.a.b.f ENSGT00940000156794.c ENSGT00940000157687.e.b ENSGT00940000158130.k ENSGT00390000011734.i ENSGT00440000034270.a.b.d ENSGT00940000156347.j.b ENSGT01060000248575.D.c.b.a.b.b.a.a.a.d ENSGT01060000248575.D.c.a.a ENSGT00530000063023.B.e.a ENSGT00940000158741.d ENSGT00940000154798.a.d.a.i #22 ENSGT00390000004766.h #23 ENSGT00390000016210.r ENSGT00390000012959.b.f ENSGT00390000000803.g ENSGT00940000156485.p ENSGT00390000017724.a.a.p ENSGT00940000156679.c.a ENSGT00390000018500.b.b.a.c.b ENSGT00940000155892.l ENSGT00650000094921.b ENSGT00940000153195.B.o ENSGT00390000017671.a.b.c ENSGT00390000004886.e ENSGT00940000167743.f ENSGT00510000051337.g.b.b River trout MODERN SPECIES 30 lysmd1 (ENSSTUG00000048374) TNFAIP8L2 (ENSSTUG00000048367) ENSSTUG00000048343 sema6e (ENSSTUG00000048299) ENSSTUG00000048286 gabpb2b (ENSSTUG00000048285) ptpn23a (ENSSTUG00000046649) SCAP (ENSSTUG00000046316) elp6 (ENSSTUG00000046296) CSPG5 (ENSSTUG00000046282) SMARCC1 (ENSSTUG00000045402) ENSSTUG00000045360 ENSSTUG00000045327 dpy19l1l (ENSSTUG00000044411) tbx20 (ENSSTUG00000044336) prdm1a (ENSSTUG00000044311) #22 atg5 (ENSSTUG00000044297) #23 dctn3 (ENSSTUG00000044272) nt5c3a (ENSSTUG00000043989) BBS9 (ENSSTUG00000043862) bmper (ENSSTUG00000043506) eaf1 (ENSSTUG00000043453) mettl6 (ENSSTUG00000043445) sh3bp5b (ENSSTUG00000043430) ENSSTUG00000043414 capn7 (ENSSTUG00000043282) bms1 (ENSSTUG00000042474) herpud2 (ENSSTUG00000042392) snrnp48 (ENSSTUG00000042331) zgc:113232 (ENSSTUG00000042252) ENSSTUG00000042218 Atlantic salmon MODERN SPECIES 11 ENSSSAG00000070837 sema6e (ENSSSAG00000066363) ENSSSAG00000066269 GABPB2 (ENSSSAG00000083479) PTPN23 (ENSSSAG00000055393) SCAP (ENSSSAG00000047868) ELP6 (ENSSSAG00000047795) CSPG5 (ENSSSAG00000047776) SMARCC1 (ENSSSAG00000044876) ENSSSAG00000109417 ENSSSAG00000044745 ENSSSAG00000087282 ENSSSAG00000120821 ENSSSAG00000043686 ENSSSAG00000091738 ENSSSAG00000043502 #22 ENSSSAG00000119516 ENSSSAG00000043479 #23 ENSSSAG00000042807 ENSSSAG00000040453 ENSSSAG00000036663 EAF1 (ENSSSAG00000036077) METTL6 (ENSSSAG00000110736) SH3BP5 (ENSSSAG00000062999) CAPN7 (ENSSSAG00000062748) ENSSSAG00000059605 ENSSSAG00000059511 ENSSSAG00000059496 ENSSSAG00000058972 ENSSSAG00000059460 plekhf2 (ENSSSAG00000115569) Huchen MODERN SPECIES 508 prdm1a (ENSHHUG00000014414) #22 atg5 (ENSHHUG00000014429) #23 dctn3 (ENSHHUG00000014537) nt5c3a (ENSHHUG00000014559) BBS9 (ENSHHUG00000014616) bmper (ENSHHUG00000014679) eaf1 (ENSHHUG00000014722) mettl6 (ENSHHUG00000014729) sh3bp5b (ENSHHUG00000014736) capn7 (ENSHHUG00000014741) ENSHHUG00000014791 bms1 (ENSHHUG00000014794) mxtx2 (ENSHHUG00000014876) herpud2 (ENSHHUG00000014883) sri (ENSHHUG00000014907) snrnp48 (ENSHHUG00000014933) Salmoninae ANCESTRAL SPECIES 27 ENSGT00940000158734.c ENSGT00990000213941 ENSGT00390000010811.d ENSGT00940000160002.p ENSGT00390000003488.b.a.b.a ENSGT00940000158641.a.b.c ENSGT00940000154412.B.a.b.f ENSGT00940000156794.d ENSGT00940000157687 ENSGT00940000158130.l ENSGT01050000247970 ENSGT01060000248575.D.c.b.a.b.b.a.a.b.a ENSGT01060000248575.D.c.b.b.a.n ENSGT00530000063023.B.e.b ENSGT00940000158741.c ENSGT00940000154798.a.d.a.j #22 ENSGT00390000004766.g #23 ENSGT00390000016210.q ENSGT00390000012959.b.e ENSGT00390000000803.h ENSGT00940000156485.o ENSGT00390000017724.a.a.o ENSGT00940000156679.c.b ENSGT00390000018500.b.b.a.c.a ENSGT00940000155892.k ENSGT00650000094921 ENSGT00940000153195.B.p ENSGT00940000154537.kb ENSGT00390000017671.a.b.d ENSGT00940000166686 ENSGT00940000153979.B Salmoninae_a ANCESTRAL SPECIES 39 ENSGT00940000160002.p ENSGT00390000003488.b.a.b.a ENSGT00940000163785.a.a.b.a.b ENSGT00940000158641.a.b.c.a ENSGT00940000154412.B.a.b.f ENSGT00940000156794.d ENSGT00940000157687.e.a ENSGT00940000158130.l ENSGT00390000011734.j ENSGT00440000034270.a.b.c ENSGT00940000156347.j.a ENSGT01060000248575.D.c.b.a.b.b.a.a.b.a ENSGT01060000248575.D.c.b.b.a.n ENSGT00530000063023.B.e.b ENSGT00940000158741.c ENSGT00940000154798.a.d.a.j #22 ENSGT00390000004766.g #23 ENSGT00390000016210.q ENSGT00390000012959.b.e ENSGT00390000000803.h ENSGT00940000156485.o ENSGT00390000017724.a.a.o ENSGT00940000156679.c.b ENSGT00390000018500.b.b.a.c.a ENSGT00940000155892.k ENSGT00650000094921.a ENSGT00940000153195.B.p ENSGT00940000154537.kb ENSGT00390000017671.a.b.d ENSGT00940000166686 ENSGT00940000153979.B Salmo ANCESTRAL SPECIES 1 ENSGT00940000160002.p ENSGT00390000003488.b.a.b.a ENSGT00940000163785.a.a.b.a.b ENSGT00940000158641.a.b.c.a ENSGT00940000154412.B.a.b.e ENSGT00940000156794.d ENSGT00940000157687.e.a ENSGT00940000158130.l ENSGT00390000011734.j ENSGT00440000034270.a.b.c ENSGT00940000156347.j.a ENSGT01060000248575.D.c.b.a.b.b.a.a.b.a ENSGT01060000248575.D.c.b.b.a.n ENSGT00530000063023.B.e.b ENSGT00940000158741.c ENSGT00940000154798.a.d.a.j #22 ENSGT00390000004766.g #23 ENSGT00390000016210.q ENSGT00390000012959.b.e ENSGT00390000000803.h ENSGT00940000156485.o ENSGT00390000017724.a.a.o ENSGT00940000156679.c.b ENSGT00390000018500.b.b.a.c.a ENSGT00940000155892.k ENSGT00650000094921.a ENSGT00940000153195.B.p ENSGT00940000154537.kb ENSGT00390000017671.a.b.d ENSGT00940000153979.B ENSGT00390000004886.f Atlantic salmon MODERN SPECIES 24 lysmd1 (ENSSSAG00000117690) TP8L2 (ENSSSAG00000038591) ENSSSAG00000038683 sema6e (ENSSSAG00000039015) ENSSSAG00000042510 GABPB2 (ENSSSAG00000042516) PTPN23 (ENSSSAG00000072368) SCAP (ENSSSAG00000052703) ELP6 (ENSSSAG00000053173) CSPG5 (ENSSSAG00000053182) SMARCC1 (ENSSSAG00000053247) ENSSSAG00000054106 ENSSSAG00000054121 ENSSSAG00000054200 ENSSSAG00000056409 ENSSSAG00000056419 #22 ENSSSAG00000082269 #23 ENSSSAG00000030761 ENSSSAG00000056430 nt5c3 (ENSSSAG00000056438) ENSSSAG00000056525 ENSSSAG00000056545 EAF1 (ENSSSAG00000117290) METTL6 (ENSSSAG00000056600) SH3BP5 (ENSSSAG00000116468) CAPN7 (ENSSSAG00000056625) ENSSSAG00000096707 ENSSSAG00000056727 ENSSSAG00000114209 ENSSSAG00000057137 ENSSSAG00000057152 River trout MODERN SPECIES 22 lysmd1 (ENSSTUG00000000233) TNFAIP8L2 (ENSSTUG00000000235) ENSSTUG00000000239 sema6e (ENSSTUG00000000260) ENSSTUG00000000277 gabpb2b (ENSSTUG00000000279) ptpn23a (ENSSTUG00000000363) SCAP (ENSSTUG00000001487) elp6 (ENSSTUG00000001618) CSPG5 (ENSSTUG00000001622) SMARCC1 (ENSSTUG00000001731) ENSSTUG00000004707 ENSSTUG00000004794 dpy19l1l (ENSSTUG00000004836) tbx20 (ENSSTUG00000005886) prdm1a (ENSSTUG00000005908) #22 atg5 (ENSSTUG00000005916) #23 dctn3 (ENSSTUG00000005925) nt5c3a (ENSSTUG00000005943) ENSSTUG00000006206 bmper (ENSSTUG00000006274) eaf1 (ENSSTUG00000007995) mettl6 (ENSSTUG00000008033) sh3bp5b (ENSSTUG00000008036) capn7 (ENSSTUG00000008046) ENSSTUG00000008082 bms1 (ENSSTUG00000008097) mxtx2 (ENSSTUG00000008307) herpud2 (ENSSTUG00000008348) sri (ENSSTUG00000008358) snrnp48 (ENSSTUG00000008372) Oncorhynchus ANCESTRAL SPECIES 38 ENSGT00940000160002.p ENSGT00390000003488.b.a.b.a ENSGT00940000163785.a.a.b.a.b ENSGT00940000158641.a.b.c.a ENSGT00940000154412.B.a.b.f ENSGT00940000156794.d ENSGT00940000157687.e.a ENSGT00940000158130.l ENSGT01050000247970 ENSGT01050000246239 ENSGT00940000156347.j.a ENSGT01060000248575.D.c.b.a.b.b.a.a.b.a ENSGT01060000248575.D.c.b.b.a.n.a ENSGT00530000063023.B.e.b ENSGT00940000158741.c ENSGT00940000154798.a.d.a.j #22 ENSGT00390000004766.g #23 ENSGT00390000016210.q ENSGT00390000012959.b.e ENSGT00390000000803.h ENSGT00940000156485.o ENSGT00390000017724.a.a.o ENSGT00940000156679.c.b ENSGT00390000018500.b.b.a.d.b ENSGT00940000155892.k ENSGT00650000094921.a ENSGT00940000153195.B.p ENSGT00940000154537.kb ENSGT00390000017671.a.b.d ENSGT00940000166686 ENSGT00940000153979.B Oncorhynchus_a ANCESTRAL SPECIES 26 ENSGT00940000158641.a.b.c.a ENSGT00940000154412.B.a.b.f ENSGT00940000156794.d ENSGT00940000167560.a ENSGT00940000157687.f ENSGT00940000157687.e.a ENSGT00940000158130.l ENSGT00390000011734.j ENSGT01050000247970 ENSGT01050000246239 ENSGT00940000156347.j.a ENSGT01060000248575.D.c.b.a.b.b.a.a.b.a ENSGT01060000248575.D.c.b.b.a.n.a ENSGT00530000063023.B.e.b ENSGT00940000158741.c ENSGT00940000154798.a.d.a.j #22 ENSGT00390000004766.g #23 ENSGT00390000016210.q ENSGT00390000012959.b.e ENSGT00390000000803.h ENSGT00940000156485.o ENSGT00390000017724.a.a.o ENSGT00940000156679.c.b ENSGT00390000018500.b.b.a.d.b ENSGT00940000155892.k ENSGT00650000094921.a ENSGT01080000257338.C.b.a.a.d.a.a.a.b.a.b.a.b.a.a.b ENSGT00940000153195.B.p ENSGT00940000154537.kb ENSGT00390000017671.a.b.d ENSGT00940000166686 Chinook salmon MODERN SPECIES 15 ENSOTSG00005015284 ENSOTSG00005015280 ptpn23a (ENSOTSG00005012714) SCAP (ENSOTSG00005012691) ENSOTSG00005012685 ENSOTSG00005012686 ENSOTSG00005008278 ENSOTSG00005008259 ENSOTSG00005008256 dpy19l1l (ENSOTSG00005006519) tbx20 (ENSOTSG00005006511) prdm1a (ENSOTSG00005006510) #22 atg5 (ENSOTSG00005006509) #23 dctn3 (ENSOTSG00005006501) nt5c3a (ENSOTSG00005006498) prdm1a (ENSOTSG00005006496) #22 atg5 (ENSOTSG00005006495) #23 dctn3 (ENSOTSG00005006494) nt5c3a (ENSOTSG00005004893) ENSOTSG00005004887 ENSOTSG00005004886 zgc:153012 (ENSOTSG00005004884) ENSOTSG00005004882 ENSOTSG00005004881 eif4e2rs1 (ENSOTSG00005004880) nsd2 (ENSOTSG00005004875) ENSOTSG00005004872 ENSOTSG00005004868 foxi2 (ENSOTSG00005004866) bmper (ENSOTSG00005004745) eaf1 (ENSOTSG00005004735) Coho salmon MODERN SPECIES 4 TNFAIP8L2 (ENSOKIG00005021910) ENSOKIG00005021925 sema6e (ENSOKIG00005021960) ENSOKIG00005022093 GABPB2 (ENSOKIG00005022103) PTPN23 (ENSOKIG00005022374) ENSOKIG00005027841 SCAP (ENSOKIG00005027922) ELP6 (ENSOKIG00005028397) ENSOKIG00005028422 SMARCC1 (ENSOKIG00005028471) ENSOKIG00005028913 ENSOKIG00005029176 ENSOKIG00005029236 TBX20 (ENSOKIG00005029592) PRDM1 (ENSOKIG00005029613) #22 ATG5 (ENSOKIG00005029626) #23 DCTN3 (ENSOKIG00005029641) nt5c3a (ENSOKIG00005029677) BBS9 (ENSOKIG00005029804) bmper (ENSOKIG00005029963) eaf1 (ENSOKIG00005032135) METTL6 (ENSOKIG00005032189) SH3BP5 (ENSOKIG00005032209) CAPN7 (ENSOKIG00005032240) ENSOKIG00005032507 ENSOKIG00005032516 HERPUD2 (ENSOKIG00005032523) ENSOKIG00005032546 ENSOKIG00005032561 sri (ENSOKIG00005032613) Rainbow trout MODERN SPECIES 11 ENSOMYG00000019465 ENSOMYG00000076224 sema6e (ENSOMYG00000019377) ENSOMYG00000019300 GABPB2 (ENSOMYG00000019292) PTPN23 (ENSOMYG00000017889) SCAP (ENSOMYG00000017586) ENSOMYG00000074932 ENSOMYG00000017481 CSPG5 (ENSOMYG00000017462) SMARCC1 (ENSOMYG00000012347) ENSOMYG00000011865 ENSOMYG00000011814 ENSOMYG00000011657 ENSOMYG00000011606 ENSOMYG00000011583 #22 ENSOMYG00000011559 #23 dctn3 (ENSOMYG00000011551) ENSOMYG00000011447 ENSOMYG00000060757 ENSOMYG00000009923 EAF1 (ENSOMYG00000009388) METTL6 (ENSOMYG00000009368) SH3BP5 (ENSOMYG00000009333) CAPN7 (ENSOMYG00000008233) ENSOMYG00000007304 ENSOMYG00000073381 ENSOMYG00000007191 ENSOMYG00000006959 ENSOMYG00000006929 ENSOMYG00000006890 Huchen MODERN SPECIES 1682 prdm1a (ENSHHUG00000051523) #22 atg5 (ENSHHUG00000051526) #23 dctn3 (ENSHHUG00000051548) nt5c3a (ENSHHUG00000051553) BBS9 (ENSHHUG00000051579) bmper (ENSHHUG00000051597) Northern pike MODERN SPECIES 19 tmod4 (ENSELUG00000011106) scnm1 (ENSELUG00000011028) lysmd1 (ENSELUG00000011008) TNFAIP8L2 (ENSELUG00000025965) ENSELUG00000030049 sema6e (ENSELUG00000010961) ENSELUG00000010833 gabpb2b (ENSELUG00000010807) ptpn23a (ENSELUG00000010766) SCAP (ENSELUG00000010684) elp6 (ENSELUG00000010647) CSPG5 (ENSELUG00000010622) ENSELUG00000010575 dpy19l1l (ENSELUG00000010518) tbx20 (ENSELUG00000010466) prdm1a (ENSELUG00000010442) #22 atg5 (ENSELUG00000010403) #23 dctn3 (ENSELUG00000010375) nt5c3a (ENSELUG00000010304) BBS9 (ENSELUG00000000371) bmper (ENSELUG00000010060) eaf1 (ENSELUG00000010011) mettl6 (ENSELUG00000009990) sh3bp5b (ENSELUG00000009960) capn7 (ENSELUG00000009894) ENSELUG00000009846 herpud2 (ENSELUG00000009840) sri (ENSELUG00000009822) snrnp48 (ENSELUG00000009766) zgc:113232 (ENSELUG00000009752) CFAP418 (ENSELUG00000009710) Spotted gar MODERN SPECIES 647 qrsl1 (ENSLOCG00000016582) #26 rtn4ip1 (ENSLOCG00000016579) #25 ENSLOCG00000016575 #24 cep162 (ENSLOCG00000016570) mrap2a (ENSLOCG00000016569) CYB5R4 (ENSLOCG00000016563) ENSLOCG00000016562 sim1a (ENSLOCG00000016561) #11 ASCC3 (ENSLOCG00000016550) #13 GRIK2 (ENSLOCG00000016542) #15 HACE1 (ENSLOCG00000016540) #17 lin28b (ENSLOCG00000016539) #18 bves (ENSLOCG00000016536) #19 popdc3 (ENSLOCG00000016535) #20 prep (ENSLOCG00000016532) #21 prdm1a (ENSLOCG00000016531) #22 atg5 (ENSLOCG00000016528) #23 NCOA7 (ENSLOCG00000016524) hint3 (ENSLOCG00000016523) ENSLOCG00000016521 trmt11 (ENSLOCG00000016519) cenpw (ENSLOCG00000016517) ENSLOCG00000016516 rspo3 (ENSLOCG00000016514) rnf146 (ENSLOCG00000016513) ECHDC1 (ENSLOCG00000016511) ptchd4 (ENSLOCG00000016510) opn5 (ENSLOCG00000016508) cd2ap (ENSLOCG00000016501) tnfrsf21 (ENSLOCG00000016498) ENSLOCG00000016497 Elephant shark MODERN SPECIES 1551 sim1a (ENSCMIG00000008944) #11 ASCC3 (ENSCMIG00000008922) #13 GRIK2 (ENSCMIG00000008642) #15 ENSCMIG00000008576 HACE1 (ENSCMIG00000008566) #17 lin28b (ENSCMIG00000008556) #18 bves (ENSCMIG00000008548) #19 popdc3 (ENSCMIG00000008546) #20 prep (ENSCMIG00000008444) #21 prdm1a (ENSCMIG00000008406) #22 atg5 (ENSCMIG00000008396) #23 ENSCMIG00000008385 #24 rtn4ip1 (ENSCMIG00000008378) #25 qrsl1 (ENSCMIG00000008358) #26 mtres1 (ENSCMIG00000008352) #28 bend3 (ENSCMIG00000008351) #29 ENSCMIG00000008348 ENSCMIG00000008346 GATC (ENSCMIG00000008344) ENSCMIG00000008338 ENSCMIG00000008335 ENSCMIG00000008333 coq5 (ENSCMIG00000008328) pdss2 (ENSCMIG00000008316) #30 rnf10 (ENSCMIG00000008310) Gnathostomata ANCESTRAL SPECIES ENSGT00940000154798.a.d.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000154798.a.d.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000154798.a.d.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000154798.a.d.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000154798.a.d.b ##22 Clupeocephala ANCESTRAL SPECIES 182 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00940000163305.b ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00940000164632.b.b ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000157219.e ENSGT00410000025698.a ENSGT00940000153433.B.a.a Otomorpha ANCESTRAL SPECIES 165 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00530000064185 ENSGT00940000155936.b ENSGT00940000164632.b.b ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000157219.e ENSGT00410000025698.a ENSGT00940000153433.B.a.a Clupeiformes ANCESTRAL SPECIES 235 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000157219.e ENSGT00410000025698.a ENSGT00940000156714.b Atlantic herring MODERN SPECIES 6 METTL24 (ENSCHAG00000022690) mapre3b (ENSCHAG00000022700) dpysl5b (ENSCHAG00000022720) dnmt3aa (ENSCHAG00000022822) dtnba (ENSCHAG00000023843) KIF3C (ENSCHAG00000023912) ENSCHAG00000023917 rab10 (ENSCHAG00000023924) GAREM2 (ENSCHAG00000023933) hadhaa (ENSCHAG00000023963) hadhb (ENSCHAG00000024547) tfap2d (ENSCHAG00000025039) tfap2b (ENSCHAG00000025062) lin28b (ENSCHAG00000025081) #18 prep (ENSCHAG00000025117) #21 ENSCHAG00000025209 ##22 xkr5a (ENSCHAG00000025213) tram2 (ENSCHAG00000025217) efhc1 (ENSCHAG00000025291) ENSCHAG00000025313 ENSCHAG00000025325 ENSCHAG00000025330 mrpl19 (ENSCHAG00000025333) itsn2a (ENSCHAG00000025403) ENSCHAG00000026148 GNPAT (ENSCHAG00000026157) mxg (ENSCHAG00000026181) LPIN1 (ENSCHAG00000026202) si:ch73-21k16.4 (ENSCHAG00000026246) id2b (ENSCHAG00000026250) kidins220b (ENSCHAG00000026256) Denticle herring MODERN SPECIES 5 dnmt3aa (ENSDCDG00000009632) dtnba (ENSDCDG00000005514) KIF3C (ENSDCDG00000005497) rab10 (ENSDCDG00000005493) GAREM2 (ENSDCDG00000005491) hadhaa (ENSDCDG00000005346) hadhb (ENSDCDG00000004689) tfap2d (ENSDCDG00000004624) ENSDCDG00000004622 tfap2b (ENSDCDG00000004613) acadl (ENSDCDG00000004606) acadl (ENSDCDG00000004602) ENSDCDG00000004598 lin28b (ENSDCDG00000004581) #18 prep (ENSDCDG00000004295) #21 ENSDCDG00000004222 ##22 xkr5a (ENSDCDG00000004215) saysd1 (ENSDCDG00000004214) ypel5 (ENSDCDG00000004213) ppp1cb (ENSDCDG00000003849) bpnt1 (ENSDCDG00000003806) ZFAND3 (ENSDCDG00000003793) wdr26b (ENSDCDG00000003734) ENSDCDG00000003534 naga (ENSDCDG00000003459) vegfab (ENSDCDG00000003439) mrps18a (ENSDCDG00000003430) rsph9 (ENSDCDG00000003423) UBXN2A (ENSDCDG00000003415) mfsd2b (ENSDCDG00000003217) wdcp (ENSDCDG00000003187) Otophysi ANCESTRAL SPECIES 55 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00980000202516 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00940000164632.b.b.a ENSGT00940000171406 Cyprinoidei ANCESTRAL SPECIES 100 ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00940000153295.b #18 ENSGT00980000202516 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b ENSGT00940000154677.b.b ENSGT00530000063834.e.b ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00530000063347.A.b ENSGT01100000263662 ENSGT00740000116213 ENSGT00390000008608 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000154798.a.d.b.a ##22 Cyprininae_a ANCESTRAL SPECIES 297 ENSGT00940000153433.B.a.a.a ENSGT00410000025698.a.f ENSGT00940000157219.e.l ENSGT00520000055570.B.l.d ENSGT00940000155459.x.a.c ENSGT00940000153897.b.b.f ENSGT00940000153739.a.b.s.c ENSGT00940000156975.e.a.d ENSGT00940000153295.b.l #18 ENSGT00950000182848.c.b.b.b.c ENSGT00950000182848.d.b ENSGT01030000234626.A.b.d ENSGT00940000154677.b.b.c ENSGT00530000063834.e.b.c ENSGT00530000063426.b.b.e #21 ENSGT00940000154798.a.d.b.a ##22 ENSGT00510000046470.a.b.j ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063347.A.b.g.b ENSGT01100000263662.a ENSGT00390000008608 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 167 si:ch73-21k16.4 (ENSSGRG00000053536) ENSSGRG00000053549 GNPAT (ENSSGRG00000053661) dnmt3aa (ENSSGRG00000053690) dtnba (ENSSGRG00000053980) ENSSGRG00000054487 KIF3C (ENSSGRG00000054489) rab10 (ENSSGRG00000054493) lin28b (ENSSGRG00000054505) #18 tfap2b (ENSSGRG00000054508) tfap2d (ENSSGRG00000054518) hadhb (ENSSGRG00000054555) hadhaa (ENSSGRG00000054647) GAREM2 (ENSSGRG00000054673) prep (ENSSGRG00000054676) #21 ENSSGRG00000054719 ##22 xkr5a (ENSSGRG00000054722) efhc1 (ENSSGRG00000054756) ENSSGRG00000054758 IPO13 (ENSSGRG00000054790) ENSSGRG00000054846 mgst3a (ENSSGRG00000054849) Golden-line barbel MODERN SPECIES 396 fez2b (ENSSGRG00000044568) esrrgb (ENSSGRG00000044565) si:ch73-21k16.4 (ENSSGRG00000044564) ENSSGRG00000044366 dnmt3aa (ENSSGRG00000043238) dtnba (ENSSGRG00000042521) KIF3C (ENSSGRG00000042512) rab10 (ENSSGRG00000042507) lin28b (ENSSGRG00000042506) #18 tfap2b (ENSSGRG00000042505) tfap2d (ENSSGRG00000042501) hadhb (ENSSGRG00000042205) hadhaa (ENSSGRG00000041894) GAREM2 (ENSSGRG00000041875) prep (ENSSGRG00000041858) #21 ENSSGRG00000041853 ##22 ENSSGRG00000041849 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 314 ENSGT00950000182848.d.b ENSGT01030000234626.A.b.d ENSGT00940000154677.b.b.c ENSGT00530000063834.e.b.c ENSGT00530000063426.b.b.e #21 ENSGT00940000154798.a.d.b.b.b ##22 ENSGT00510000046470.a.b.j ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063347.A.b.g.b ENSGT01100000263662.a ENSGT01030000234626.A.b.c ENSGT00940000154677.b.b.d ENSGT00530000063834.e.b.d ENSGT00530000063426.b.b.f #21 ENSGT00940000154798.a.d.b.b.a ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b.i ENSGT00940000154096.b.b.a.h.b.a ENSGT00530000063347.A.b.g.a ENSGT01100000263662.b ENSGT00740000116213 ENSGT00390000008608 Cyprininae_a ANCESTRAL SPECIES 130 ENSGT00940000153433.B.a.a.b ENSGT00410000025698.a.e ENSGT00940000157219.e.k ENSGT00520000055570.B.l.c ENSGT00940000155459.x.a.d ENSGT00940000153897.b.b.e ENSGT00940000153739.a.b.s.d ENSGT00940000156975.e.a.c ENSGT00940000153295.b.k #18 ENSGT00950000182848.c.b.b.b.d ENSGT00950000182848.d.a ENSGT01030000234626.A.b.c ENSGT00940000154677.b.b.d ENSGT00530000063834.e.b.d ENSGT00530000063426.b.b.f #21 ENSGT00940000154798.a.d.b.b.a ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b.i ENSGT00940000154096.b.b.a.h.b.a ENSGT00940000154096.b.b.a.g ENSGT00530000063347.A.b.g.a ENSGT01100000263662.b ENSGT00740000116213 Common carp reference MODERN SPECIES 34 fez2b (ENSCCRG00000045991) esrrgb (ENSCCRG00000053761) si:ch73-21k16.4 (ENSCCRG00000012895) ENSCCRG00000012939 ENSCCRG00000013654 dnmt3aa (ENSCCRG00000058953) dtnba (ENSCCRG00000058037) ENSCCRG00000079344 lin28b (ENSCCRG00000043756) #18 rab10 (ENSCCRG00000043765) tfap2b (ENSCCRG00000003128) tfap2d (ENSCCRG00000003096) hadhb (ENSCCRG00000055821) hadhaa (ENSCCRG00000010021) GAREM2 (ENSCCRG00000010023) ENSCCRG00000023759 ##22 prep (ENSCCRG00000010038) #21 xkr5a (ENSCCRG00000010765) tram2 (ENSCCRG00000004112) ENSCCRG00000076012 ENSCCRG00000028238 ENSCCRG00000077241 ENSCCRG00000034744 PAX1 (ENSCCRG00000034722) nkx2.2b (ENSCCRG00000012145) nkx2.4b (ENSCCRG00000012144) xrn2 (ENSCCRG00000005388) INSM1 (ENSCCRG00000053371) CFAP61 (ENSCCRG00000005348) crnkl1 (ENSCCRG00000073378) NAA20 (ENSCCRG00000005306) Goldfish MODERN SPECIES 12 ENSCARG00000003669 ENSCARG00000003661 taar10 (ENSCARG00000003654) ENSCARG00000003649 ENSCARG00000055511 taar1b (ENSCARG00000055471) ENSCARG00000055463 ENSCARG00000055440 ENSCARG00000055424 ENSCARG00000055411 ENSCARG00000055396 ENSCARG00000055381 hadhb (ENSCARG00000054721) GAREM2 (ENSCARG00000054643) prep (ENSCARG00000054065) #21 ENSCARG00000054024 ##22 xkr5a (ENSCARG00000053972) tram2 (ENSCARG00000053905) ENSCARG00000053889 IPO13 (ENSCARG00000053028) ENSCARG00000052887 ENSCARG00000052859 mgst3a (ENSCARG00000052832) PAX1 (ENSCARG00000052815) nkx2.2b (ENSCARG00000052799) nkx2.4b (ENSCARG00000052776) xrn2 (ENSCARG00000052557) insm1a (ENSCARG00000052514) CFAP61 (ENSCARG00000052400) crnkl1 (ENSCARG00000052349) naa20 (ENSCARG00000052297) Cyprininae ANCESTRAL SPECIES 314 ENSGT00940000153433.B.a.a.a ENSGT00410000025698.a.f ENSGT00940000157219.e.l ENSGT00520000055570.B.l.d ENSGT00940000155459.x.a.c ENSGT00940000153897.b.b.f ENSGT00940000153739.a.b.s.c ENSGT00940000156975.e.a.d ENSGT00940000153295.b.l #18 ENSGT00950000182848.c.b.b.b.c ENSGT00950000182848.d.b ENSGT01030000234626.A.b.d ENSGT00940000154677.b.b.c ENSGT00530000063834.e.b.c ENSGT00530000063426.b.b.e #21 ENSGT00940000154798.a.d.b.b.b ##22 ENSGT00510000046470.a.b.j ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063347.A.b.g.b ENSGT01100000263662.a ENSGT01030000234626.A.b.c ENSGT00940000154677.b.b.d ENSGT00530000063834.e.b.d ENSGT00530000063426.b.b.f #21 ENSGT00940000154798.a.d.b.b.a ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b.i ENSGT00940000154096.b.b.a.h.b.a ENSGT00530000063347.A.b.g.a ENSGT01100000263662.b Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154798.a.d.b.b.b ##22 Common carp reference MODERN SPECIES 28 fez2b (ENSCCRG00000013917) esrrgb (ENSCCRG00000012875) si:ch73-21k16.4 (ENSCCRG00000080993) ENSCCRG00000012411 ENSCCRG00000012420 dnmt3aa (ENSCCRG00000012465) dtnba (ENSCCRG00000074769) KIF3C (ENSCCRG00000043861) RAB10 (ENSCCRG00000082614) lin28b (ENSCCRG00000063422) #18 tfap2b (ENSCCRG00000078327) tfap2d (ENSCCRG00000025627) hadhb (ENSCCRG00000010774) hadhaa (ENSCCRG00000074806) GAREM2 (ENSCCRG00000010843) ENSCCRG00000010851 ##22 prep (ENSCCRG00000010847) #21 tram2 (ENSCCRG00000028190) efhc1 (ENSCCRG00000028193) ENSCCRG00000065663 ENSCCRG00000008668 ENSCCRG00000041541 PAX1 (ENSCCRG00000041349) nkx2.2b (ENSCCRG00000041579) nkx2.4b (ENSCCRG00000041582) xrn2 (ENSCCRG00000041635) INSM1 (ENSCCRG00000066351) ENSCCRG00000048370 crnkl1 (ENSCCRG00000066493) NAA20 (ENSCCRG00000042226) ENSCCRG00000042213 Goldfish MODERN SPECIES 645 si:ch73-21k16.4 (ENSCARG00000024384) ENSCARG00000024422 ENSCARG00000024497 dnmt3aa (ENSCARG00000024559) dtnba (ENSCARG00000024814) KIF3C (ENSCARG00000024977) rab10 (ENSCARG00000024986) lin28b (ENSCARG00000025002) #18 tfap2b (ENSCARG00000025023) tfap2d (ENSCARG00000025057) ENSCARG00000025113 hadhb (ENSCARG00000025176) hadhaa (ENSCARG00000025436) GAREM2 (ENSCARG00000025515) prep (ENSCARG00000025628) #21 ENSCARG00000025869 ##22 tram2 (ENSCARG00000025886) efhc1 (ENSCARG00000025950) ENSCARG00000025976 ENSCARG00000025987 Euteleosteomorpha ANCESTRAL SPECIES 214 ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00940000155610.o.a #15 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00940000163305.b ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00940000156891.a.b ENSGT00940000153804.A ENSGT00940000155086.B ENSGT00940000166976 ENSGT00530000063558.B Acanthomorphata ANCESTRAL SPECIES 58 ENSGT00590000083139.d.b ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b Euacanthomorphacea ANCESTRAL SPECIES 13 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Percomorphaceae ANCESTRAL SPECIES 14 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Tiger tail seahorse MODERN SPECIES 184 lin28b (ENSHCOG00000010844) #18 prep (ENSHCOG00000010835) #21 ENSHCOG00000010803 ##22 xkr5a (ENSHCOG00000010790) GRIK2 (ENSHCOG00000010774) #15 SIM1 (ENSHCOG00000010752) #11 ENSHCOG00000010729 mrap2b (ENSHCOG00000010714) ENSHCOG00000010678 #24 ENSHCOG00000010661 ##25 sobpb (ENSHCOG00000010649) #31 ROCK2 (ENSHCOG00000010631) ENSHCOG00000000329 ENSHCOG00000000674 kcnf1a (ENSHCOG00000010566) pdia6 (ENSHCOG00000010544) hpcal1 (ENSHCOG00000010484) apobb.1 (ENSHCOG00000010447) Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Cichlidae ANCESTRAL SPECIES 12 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000178564 ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000178564 ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000178564 ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Haplochromini ANCESTRAL SPECIES 13 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000178564 ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000178564 ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Haplochromini_B ANCESTRAL SPECIES 34 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT01100000263664.b.b Zebra mbuna MODERN SPECIES 1097 pdia6 (ENSMZEG00005018295) kcnf1a (ENSMZEG00005018289) ENSMZEG00005018286 ENSMZEG00005018282 rock2b (ENSMZEG00005018234) sobpb (ENSMZEG00005018223) #31 ENSMZEG00005018219 ##25 ENSMZEG00005018211 #24 mrap2b (ENSMZEG00005018206) ripply2 (ENSMZEG00005018204) SIM1 (ENSMZEG00005018193) #11 ENSMZEG00005018185 ENSMZEG00005018179 #15 lin28b (ENSMZEG00005018178) #18 prep (ENSMZEG00005018171) #21 ENSMZEG00005018167 ##22 xkr5a (ENSMZEG00005018164) tram2 (ENSMZEG00005018161) efhc1 (ENSMZEG00005018159) ENSMZEG00005018157 mrpl19 (ENSMZEG00005018154) mycn (ENSMZEG00005018153) smek1 (ENSMZEG00005018149) ENSMZEG00005018146 paplnb (ENSMZEG00005018145) PLEKHG1 (ENSMZEG00005018138) tcp1 (ENSMZEG00005018125) acat2 (ENSMZEG00005018127) wtap (ENSMZEG00005018121) sod2 (ENSMZEG00005018119) ENSMZEG00005018117 Eastern happy MODERN SPECIES 6 pdia6 (ENSACLG00000022205) kcnf1a (ENSACLG00000022185) ENSACLG00000022165 ENSACLG00000022152 rock2b (ENSACLG00000021968) sobpb (ENSACLG00000021926) #31 ENSACLG00000021907 ##25 ENSACLG00000021785 #24 mrap2b (ENSACLG00000021773) ripply2 (ENSACLG00000021740) SIM1 (ENSACLG00000021729) #11 ENSACLG00000021702 ENSACLG00000021584 #15 lin28b (ENSACLG00000021564) #18 prep (ENSACLG00000021516) #21 ENSACLG00000021497 ##22 xkr5a (ENSACLG00000021490) tram2 (ENSACLG00000021448) efhc1 (ENSACLG00000021421) ENSACLG00000021389 mrpl19 (ENSACLG00000021351) mycn (ENSACLG00000021336) smek1 (ENSACLG00000021261) ENSACLG00000021247 paplnb (ENSACLG00000021209) PLEKHG1 (ENSACLG00000021076) tcp1 (ENSACLG00000020965) acat2 (ENSACLG00000020918) wtap (ENSACLG00000020899) sod2 (ENSACLG00000020876) ENSACLG00000020862 P. nyererei MODERN SPECIES 336 kcnf1a (ENSPNYG00000022793) ENSPNYG00000022789 ENSPNYG00000022785 ENSPNYG00000022782 rock2b (ENSPNYG00000022729) sobpb (ENSPNYG00000022706) #31 ENSPNYG00000022697 ##25 ENSPNYG00000022681 #24 mrap2b (ENSPNYG00000022668) ripply2 (ENSPNYG00000022659) sim1a (ENSPNYG00000022633) #11 ENSPNYG00000022610 ENSPNYG00000022594 #15 lin28b (ENSPNYG00000022590) #18 prep (ENSPNYG00000022582) #21 ENSPNYG00000022569 ##22 xkr5a (ENSPNYG00000022559) tram2 (ENSPNYG00000022540) efhc1 (ENSPNYG00000022525) ENSPNYG00000022518 mrpl19 (ENSPNYG00000022512) mycn (ENSPNYG00000022509) smek1 (ENSPNYG00000022476) ENSPNYG00000022461 paplnb (ENSPNYG00000022451) ENSPNYG00000022442 ENSPNYG00000022434 tcp1 (ENSPNYG00000022378) acat2 (ENSPNYG00000022364) wtap (ENSPNYG00000022353) sod2 (ENSPNYG00000022342) Burton s mouthbrooder MODERN SPECIES 312 kcnf1a (ENSHBUG00000000423) ENSHBUG00000014567 ENSHBUG00000014563 ENSHBUG00000014548 rock2b (ENSHBUG00000014525) sobpb (ENSHBUG00000014464) #31 ENSHBUG00000014443 ##25 ENSHBUG00000000419 #24 mrap2b (ENSHBUG00000014337) ripply2 (ENSHBUG00000014331) SIM1 (ENSHBUG00000014296) #11 ENSHBUG00000014245 GRIK2 (ENSHBUG00000014232) #15 lin28b (ENSHBUG00000014195) #18 prep (ENSHBUG00000014169) #21 ENSHBUG00000014127 ##22 xkr5a (ENSHBUG00000014101) tram2 (ENSHBUG00000014095) efhc1 (ENSHBUG00000014062) ENSHBUG00000014054 mrpl19 (ENSHBUG00000014044) mycn (ENSHBUG00000014040) smek1 (ENSHBUG00000014012) ENSHBUG00000013942 paplnb (ENSHBUG00000013931) PLEKHG1 (ENSHBUG00000013918) tcp1 (ENSHBUG00000013899) acat2 (ENSHBUG00000013808) wtap (ENSHBUG00000001138) sod2 (ENSHBUG00000013750) FNDC1 (ENSHBUG00000013724) Lyretail cichlid MODERN SPECIES 314 kcnf1a (ENSNBRG00000020494) ENSNBRG00000020490 ENSNBRG00000020485 ENSNBRG00000020479 rock2b (ENSNBRG00000020410) sobpb (ENSNBRG00000020399) #31 ENSNBRG00000020385 ##25 ENSNBRG00000020350 #24 mrap2b (ENSNBRG00000020325) ripply2 (ENSNBRG00000020299) sim1a (ENSNBRG00000020202) #11 ENSNBRG00000020165 GRIK2 (ENSNBRG00000020131) #15 lin28b (ENSNBRG00000020118) #18 prep (ENSNBRG00000020096) #21 ENSNBRG00000020082 ##22 xkr5a (ENSNBRG00000020053) tram2 (ENSNBRG00000020036) efhc1 (ENSNBRG00000019997) ENSNBRG00000019983 mrpl19 (ENSNBRG00000019970) mycn (ENSNBRG00000019959) smek1 (ENSNBRG00000019921) ENSNBRG00000019894 paplnb (ENSNBRG00000019859) ENSNBRG00000019846 tcp1 (ENSNBRG00000019787) acat2 (ENSNBRG00000019737) wtap (ENSNBRG00000019705) sod2 (ENSNBRG00000019677) ENSNBRG00000019660 Nile tilapia MODERN SPECIES 6 kcnf1a (ENSONIG00000020982) ENSONIG00000020983 ENSONIG00000033186 rock2b (ENSONIG00000014677) sobpb (ENSONIG00000014685) #31 ENSONIG00000014688 ##25 ENSONIG00000014690 #24 mrap2 (ENSONIG00000039224) ripply2 (ENSONIG00000040634) SIM1 (ENSONIG00000014696) #11 ENSONIG00000014699 ENSONIG00000028237 GRIK2 (ENSONIG00000014701) #15 lin28b (ENSONIG00000014706) #18 prep (ENSONIG00000014707) #21 ENSONIG00000014709 ##22 xkr5a (ENSONIG00000014716) tram2 (ENSONIG00000014718) efhc1 (ENSONIG00000014725) ENSONIG00000014730 mrpl19 (ENSONIG00000014731) mycn (ENSONIG00000014735) smek1 (ENSONIG00000014737) ENSONIG00000027132 paplnb (ENSONIG00000014740) PLEKHG1 (ENSONIG00000013238) tcp1 (ENSONIG00000013244) acat2 (ENSONIG00000013255) wtap (ENSONIG00000013259) sod2 (ENSONIG00000013263) FNDC1 (ENSONIG00000013266) Midas cichlid MODERN SPECIES 271 pdia6 (ENSACIG00000010258) kcnf1a (ENSACIG00000010244) ENSACIG00000010222 ENSACIG00000010216 rock2b (ENSACIG00000010153) sobpb (ENSACIG00000010134) #31 ENSACIG00000010082 ##25 ENSACIG00000010042 #24 mrap2b (ENSACIG00000009979) ripply2 (ENSACIG00000009954) SIM1 (ENSACIG00000009895) #11 ENSACIG00000009873 GRIK2 (ENSACIG00000009831) #15 lin28b (ENSACIG00000009818) #18 prep (ENSACIG00000009776) #21 ENSACIG00000009747 ##22 xkr5a (ENSACIG00000009725) tram2 (ENSACIG00000009677) efhc1 (ENSACIG00000009608) ENSACIG00000009591 ENSACIG00000009580 mrpl19 (ENSACIG00000009562) mycn (ENSACIG00000009541) smek1 (ENSACIG00000009497) ENSACIG00000009424 paplnb (ENSACIG00000009378) ENSACIG00000009358 tcp1 (ENSACIG00000009317) acat2 (ENSACIG00000009288) wtap (ENSACIG00000009155) sod2 (ENSACIG00000009132) Pomacentridae ANCESTRAL SPECIES 34 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Pomacentridae_A ANCESTRAL SPECIES 26 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Amphiprion ANCESTRAL SPECIES 55 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 2 kcnf1a (ENSAPEG00000020863) ENSAPEG00000020875 ENSAPEG00000020886 rock2b (ENSAPEG00000020932) sobpb (ENSAPEG00000021162) #31 ENSAPEG00000021188 ##25 ENSAPEG00000021210 #24 mrap2b (ENSAPEG00000021269) ENSAPEG00000021288 SIM1 (ENSAPEG00000021297) #11 ENSAPEG00000021332 GRIK2 (ENSAPEG00000021384) #15 lin28b (ENSAPEG00000021809) #18 lin28b (ENSAPEG00000021919) #18 prep (ENSAPEG00000022007) #21 ENSAPEG00000022031 ##22 xkr5a (ENSAPEG00000022044) ENSAPEG00000022072 prep (ENSAPEG00000022083) #21 ENSAPEG00000022096 ##22 xkr5a (ENSAPEG00000022118) tram2 (ENSAPEG00000022143) efhc1 (ENSAPEG00000022192) ENSAPEG00000022427 ENSAPEG00000022432 mrpl19 (ENSAPEG00000022446) mycn (ENSAPEG00000022477) smek1 (ENSAPEG00000022492) ERH (ENSAPEG00000022577) paplnb (ENSAPEG00000022586) ENSAPEG00000022606 Orange clownfish MODERN SPECIES 2 sobpb (ENSAPEG00000021162) #31 ENSAPEG00000021188 ##25 ENSAPEG00000021210 #24 mrap2b (ENSAPEG00000021269) ENSAPEG00000021288 SIM1 (ENSAPEG00000021297) #11 ENSAPEG00000021332 GRIK2 (ENSAPEG00000021384) #15 lin28b (ENSAPEG00000021809) #18 lin28b (ENSAPEG00000021919) #18 prep (ENSAPEG00000022007) #21 ENSAPEG00000022031 ##22 xkr5a (ENSAPEG00000022044) ENSAPEG00000022072 prep (ENSAPEG00000022083) #21 ENSAPEG00000022096 ##22 xkr5a (ENSAPEG00000022118) tram2 (ENSAPEG00000022143) efhc1 (ENSAPEG00000022192) ENSAPEG00000022427 ENSAPEG00000022432 mrpl19 (ENSAPEG00000022446) mycn (ENSAPEG00000022477) smek1 (ENSAPEG00000022492) ERH (ENSAPEG00000022577) paplnb (ENSAPEG00000022586) ENSAPEG00000022606 tcp1 (ENSAPEG00000022617) acat2 (ENSAPEG00000022680) wtap (ENSAPEG00000022698) sod2 (ENSAPEG00000022721) Clown anemonefish MODERN SPECIES 2690 prep (ENSAOCG00000015962) #21 ENSAOCG00000015998 ##22 xkr5a (ENSAOCG00000016033) tram2 (ENSAOCG00000016090) efhc1 (ENSAOCG00000016103) ENSAOCG00000016125 mrpl19 (ENSAOCG00000016156) mycn (ENSAOCG00000016175) Spiny chromis MODERN SPECIES 62 hpcal1 (ENSAPOG00000013251) pdia6 (ENSAPOG00000013303) kcnf1a (ENSAPOG00000013311) ENSAPOG00000013334 rock2b (ENSAPOG00000013574) sobpb (ENSAPOG00000013625) #31 ENSAPOG00000013636 ##25 ENSAPOG00000013704 #24 mrap2b (ENSAPOG00000000374) ripply2 (ENSAPOG00000013737) ENSAPOG00000013893 #11 ENSAPOG00000013930 GRIK2 (ENSAPOG00000013986) #15 lin28b (ENSAPOG00000014016) #18 prep (ENSAPOG00000014090) #21 ENSAPOG00000014135 ##22 xkr5a (ENSAPOG00000014150) tram2 (ENSAPOG00000014197) efhc1 (ENSAPOG00000000385) ENSAPOG00000014221 mrpl19 (ENSAPOG00000014228) mycn (ENSAPOG00000014240) smek1 (ENSAPOG00000014314) ENSAPOG00000014325 paplnb (ENSAPOG00000014347) Bicolor damselfish MODERN SPECIES 2178 lin28b (ENSSPAG00000009877) #18 prep (ENSSPAG00000009849) #21 ENSSPAG00000009830 ##22 xkr5a (ENSSPAG00000009809) tram2 (ENSSPAG00000009791) Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.h ENSGT01010000222933 ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Aplocheiloidei ANCESTRAL SPECIES 27 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.h ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Mangrove rivulus MODERN SPECIES 20 ENSKMAG00000016678 #24 mrap2b (ENSKMAG00000016660) ripply2 (ENSKMAG00000016653) SIM1 (ENSKMAG00000016606) #11 ENSKMAG00000016584 ENSKMAG00000016569 ENSKMAG00000016548 ENSKMAG00000016535 ENSKMAG00000016507 ENSKMAG00000016484 ENSKMAG00000016463 ENSKMAG00000016448 GRIK2 (ENSKMAG00000016401) #15 lin28b (ENSKMAG00000016334) #18 prep (ENSKMAG00000016265) #21 ENSKMAG00000016247 ##22 xkr5a (ENSKMAG00000016226) tram2 (ENSKMAG00000016177) efhc1 (ENSKMAG00000016043) ENSKMAG00000015994 mrpl19 (ENSKMAG00000015967) mycn (ENSKMAG00000015950) smek1 (ENSKMAG00000015917) ERH (ENSKMAG00000015901) paplnb (ENSKMAG00000015873) PLEKHG1 (ENSKMAG00000015816) tcp1 (ENSKMAG00000015727) acat2 (ENSKMAG00000015691) wtap (ENSKMAG00000015655) sod2 (ENSKMAG00000015554) FNDC1 (ENSKMAG00000015455) Turquoise killifish MODERN SPECIES 1613 ROCK2 (ENSNFUG00015013140) SOBP (ENSNFUG00015013041) #31 Nfu_g_1_018982 (ENSNFUG00015013017) ##25 ENSNFUG00015012987 #24 ENSNFUG00015012976 MRAP2A (ENSNFUG00015012967) ripply2 (ENSNFUG00015012958) SIM1 (ENSNFUG00015012934) #11 ENSNFUG00015012925 ENSNFUG00015012912 ENSNFUG00015012905 GRIK2 (ENSNFUG00015012495) #15 lin28b (ENSNFUG00015012428) #18 ENSNFUG00015012425 prep (ENSNFUG00015012052) #21 ENSNFUG00015012027 ##22 Nfu_g_1_019020 (ENSNFUG00015012021) tram2 (ENSNFUG00015011996) ENSNFUG00015011982 EVA1A (ENSNFUG00015011976) efhc1 (ENSNFUG00015011969) MRPL19 (ENSNFUG00015011964) mycn (ENSNFUG00015011955) ENSNFUG00015011949 SMEK1 (ENSNFUG00015011795) OLA.1317 (ENSNFUG00015011759) paplnb (ENSNFUG00015011727) PLEKHG1 (ENSNFUG00015011706) TCP1 (ENSNFUG00015011663) WTAP (ENSNFUG00015011580) SOD2 (ENSNFUG00015011560) Cyprinodontoidei ANCESTRAL SPECIES 12 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.b ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Poeciliinae ANCESTRAL SPECIES 15 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.b.d ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Poecilia ANCESTRAL SPECIES 9 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.b.d ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 NAME_6 ANCESTRAL SPECIES 2 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.b.d ENSGT00390000008152.A.g.a ENSGT00940000155610.o.b #15 ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000180091 ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Amazon molly MODERN SPECIES 253 pdia6 (ENSPFOG00000019286) kcnf1a (ENSPFOG00000020613) ENSPFOG00000019292 ROCK2 (ENSPFOG00000019296) sobpb (ENSPFOG00000019308) #31 ENSPFOG00000019310 ##25 ENSPFOG00000019314 #24 mrap2b (ENSPFOG00000019319) ripply2 (ENSPFOG00000021975) SIM1 (ENSPFOG00000019320) #11 ENSPFOG00000019325 ENSPFOG00000024417 GRIK2 (ENSPFOG00000019332) #15 lin28b (ENSPFOG00000019352) #18 prep (ENSPFOG00000019358) #21 ENSPFOG00000019374 ##22 xkr5a (ENSPFOG00000019377) tram2 (ENSPFOG00000019383) efhc1 (ENSPFOG00000019386) ENSPFOG00000019390 mrpl19 (ENSPFOG00000019392) ENSPFOG00000022923 mycn (ENSPFOG00000019393) ENSPFOG00000019396 smek1 (ENSPFOG00000019400) ENSPFOG00000019405 paplnb (ENSPFOG00000019407) ENSPFOG00000020614 PLEKHG1 (ENSPFOG00000019410) tcp1 (ENSPFOG00000019417) acat2 (ENSPFOG00000019421) Sailfin molly MODERN SPECIES 860 GRIK2 (ENSPLAG00000009137) #15 lin28b (ENSPLAG00000009101) #18 prep (ENSPLAG00000009091) #21 ENSPLAG00000009056 ##22 xkr5a (ENSPLAG00000009052) tram2 (ENSPLAG00000009031) efhc1 (ENSPLAG00000008985) ENSPLAG00000000185 ENSPLAG00000008958 ENSPLAG00000008952 Guppy MODERN SPECIES 452 ENSPREG00000006582 ROCK2 (ENSPREG00000006518) sobpb (ENSPREG00000006485) #31 ENSPREG00000006458 ##25 ENSPREG00000006426 #24 mrap2b (ENSPREG00000006397) ENSPREG00000006372 SIM1 (ENSPREG00000006326) #11 ENSPREG00000006288 ENSPREG00000006267 ENSPREG00000006258 ENSPREG00000006240 GRIK2 (ENSPREG00000006189) #15 lin28b (ENSPREG00000006170) #18 prep (ENSPREG00000006132) #21 ENSPREG00000006060 ##22 xkr5a (ENSPREG00000006029) tram2 (ENSPREG00000005990) efhc1 (ENSPREG00000005975) ENSPREG00000005957 mrpl19 (ENSPREG00000005939) mycn (ENSPREG00000005916) smek1 (ENSPREG00000005878) ERH (ENSPREG00000005785) paplnb (ENSPREG00000005755) ENSPREG00000005734 tcp1 (ENSPREG00000005703) acat2 (ENSPREG00000005675) wtap (ENSPREG00000005555) sod2 (ENSPREG00000005529) FNDC1 (ENSPREG00000005423) Platyfish MODERN SPECIES 6 pdia6 (ENSXMAG00000017773) ENSXMAG00000017803 ENSXMAG00000026651 ROCK2 (ENSXMAG00000017805) sobpb (ENSXMAG00000013657) #31 ENSXMAG00000013665 ##25 ENSXMAG00000013677 #24 mrap2b (ENSXMAG00000022537) ripply2 (ENSXMAG00000027822) SIM1 (ENSXMAG00000019075) #11 ENSXMAG00000003517 ENSXMAG00000021597 GRIK2 (ENSXMAG00000003453) #15 lin28b (ENSXMAG00000003450) #18 prep (ENSXMAG00000003424) #21 ENSXMAG00000003417 ##22 xkr5a (ENSXMAG00000003413) tram2 (ENSXMAG00000003399) efhc1 (ENSXMAG00000003396) ENSXMAG00000021325 mrpl19 (ENSXMAG00000003388) mycn (ENSXMAG00000003386) smek1 (ENSXMAG00000003375) ENSXMAG00000029136 paplnb (ENSXMAG00000003371) PLEKHG1 (ENSXMAG00000003360) tcp1 (ENSXMAG00000003351) acat2 (ENSXMAG00000003334) wtap (ENSXMAG00000003331) sod2 (ENSXMAG00000003325) FNDC1 (ENSXMAG00000003322) NAME_4 ANCESTRAL SPECIES 8 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.b ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Mummichog MODERN SPECIES 2240 ENSFHEG00000022522 GRIK2 (ENSFHEG00000022564) #15 lin28b (ENSFHEG00000022590) #18 prep (ENSFHEG00000022636) #21 ENSFHEG00000022651 ##22 xkr5a (ENSFHEG00000022661) tram2 (ENSFHEG00000022697) efhc1 (ENSFHEG00000022840) ENSFHEG00000022847 mrpl19 (ENSFHEG00000022887) mycn (ENSFHEG00000022918) smek1 (ENSFHEG00000022980) ERH (ENSFHEG00000022994) paplnb (ENSFHEG00000023004) PLEKHG1 (ENSFHEG00000023038) tcp1 (ENSFHEG00000023109) acat2 (ENSFHEG00000023174) wtap (ENSFHEG00000023365) sod2 (ENSFHEG00000023363) FNDC1 (ENSFHEG00000023360) Sheepshead minnow MODERN SPECIES 150 kcnf1a (ENSCVAG00000001946) ENSCVAG00000001944 ENSCVAG00000001942 rock2b (ENSCVAG00000001937) sobpb (ENSCVAG00000001928) #31 ENSCVAG00000001924 ##25 ENSCVAG00000001920 #24 mrap2b (ENSCVAG00000001912) ripply2 (ENSCVAG00000001907) SIM1 (ENSCVAG00000001903) #11 ENSCVAG00000001894 ENSCVAG00000001891 GRIK2 (ENSCVAG00000001886) #15 lin28b (ENSCVAG00000001868) #18 prep (ENSCVAG00000001865) #21 ENSCVAG00000001859 ##22 xkr5a (ENSCVAG00000001852) tram2 (ENSCVAG00000001838) ENSCVAG00000001824 ENSCVAG00000001822 mrpl19 (ENSCVAG00000001815) mycn (ENSCVAG00000001807) smek1 (ENSCVAG00000001802) ENSCVAG00000001791 paplnb (ENSCVAG00000001786) PLEKHG1 (ENSCVAG00000001777) tcp1 (ENSCVAG00000001769) acat2 (ENSCVAG00000001762) wtap (ENSCVAG00000001753) sod2 (ENSCVAG00000001748) ENSCVAG00000001745 Oryzias ANCESTRAL SPECIES 19 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b.e ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Oryzias_b ANCESTRAL SPECIES 17 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b.e ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Indian medaka MODERN SPECIES 22 hpcal1 (ENSOMEG00000006047) pdia6 (ENSOMEG00000006060) kcnf1a (ENSOMEG00000006072) ENSOMEG00000001033 ROCK2 (ENSOMEG00000006171) sobpb (ENSOMEG00000006204) #31 ENSOMEG00000006229 ##25 ENSOMEG00000006269 #24 mrap2b (ENSOMEG00000006279) ENSOMEG00000006291 sim1a (ENSOMEG00000006317) #11 ENSOMEG00000006337 GRIK2 (ENSOMEG00000006383) #15 lin28b (ENSOMEG00000006425) #18 prep (ENSOMEG00000006468) #21 ENSOMEG00000006502 ##22 xkr5a (ENSOMEG00000006544) tram2 (ENSOMEG00000006582) efhc1 (ENSOMEG00000006600) ENSOMEG00000006632 mrpl19 (ENSOMEG00000006661) mycn (ENSOMEG00000000785) smek1 (ENSOMEG00000006704) ERH (ENSOMEG00000006713) ENSOMEG00000006737 paplnb (ENSOMEG00000006760) PLEKHG1 (ENSOMEG00000006809) tcp1 (ENSOMEG00000006853) acat2 (ENSOMEG00000006874) wtap (ENSOMEG00000006907) sod2 (ENSOMEG00000006930) Javanese ricefish MODERN SPECIES 16 RHOB (ENSOJAG00000021086) hpcal1 (ENSOJAG00000021092) apobb.1 (ENSOJAG00000021114) kcnf1a (ENSOJAG00000021419) ENSOJAG00000021426 rock2b (ENSOJAG00000021566) sobpb (ENSOJAG00000022505) #31 ENSOJAG00000022510 ##25 ENSOJAG00000022563 ripply2 (ENSOJAG00000022567) sim1a (ENSOJAG00000022574) #11 ENSOJAG00000022584 GRIK2 (ENSOJAG00000022652) #15 lin28b (ENSOJAG00000023134) #18 prep (ENSOJAG00000023160) #21 ENSOJAG00000023216 ##22 xkr5a (ENSOJAG00000023230) tram2 (ENSOJAG00000023245) efhc1 (ENSOJAG00000023264) ENSOJAG00000023270 mrpl19 (ENSOJAG00000023277) mycn (ENSOJAG00000023283) smek1 (ENSOJAG00000023298) ERH (ENSOJAG00000023329) paplnb (ENSOJAG00000023337) PLEKHG1 (ENSOJAG00000023344) ENSOJAG00000015416 tcp1 (ENSOJAG00000015426) acat2 (ENSOJAG00000015488) wtap (ENSOJAG00000015544) sod2 (ENSOJAG00000015572) Oryzias_a ANCESTRAL SPECIES 13 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A.g.a ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b.e ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Japanese Medaka HdrR MODERN SPECIES 16 hpcal1 (ENSORLG00000012666) pdia6 (ENSORLG00000012695) kcnf1a (ENSORLG00000012699) ENSORLG00000012706 rock2b (ENSORLG00000012731) sobpb (ENSORLG00000029359) #31 ENSORLG00000012770 ##25 ENSORLG00000012804 #24 mrap2b (ENSORLG00000028866) ripply2 (ENSORLG00000029408) ENSORLG00000012851 sim1a (ENSORLG00000012840) #11 GRIK2 (ENSORLG00000012884) #15 lin28b (ENSORLG00000012891) #18 prep (ENSORLG00000012934) #21 prdm1c (ENSORLG00000012948) ##22 xkr5a (ENSORLG00000012952) tram2 (ENSORLG00000012971) efhc1 (ENSORLG00000012981) ENSORLG00000013000 mrpl19 (ENSORLG00000013027) mycn (ENSORLG00000022362) smek1 (ENSORLG00000013092) ERH (ENSORLG00000028815) paplnb (ENSORLG00000013108) PLEKHG1 (ENSORLG00000013150) tcp1 (ENSORLG00000013195) acat2 (ENSORLG00000013226) wtap (ENSORLG00000013240) sod2 (ENSORLG00000013261) FNDC1 (ENSORLG00000013281) Chinese medaka MODERN SPECIES 676 ENSOSIG00000014725 apobb.1 (ENSOSIG00000014681) hpcal1 (ENSOSIG00000014671) pdia6 (ENSOSIG00000012696) kcnf1a (ENSOSIG00000012675) rock2b (ENSOSIG00000011933) sobpb (ENSOSIG00000011917) #31 ENSOSIG00000011912 ##25 ENSOSIG00000011119 #24 mrap2b (ENSOSIG00000011116) sim1a (ENSOSIG00000011103) #11 ENSOSIG00000011102 GRIK2 (ENSOSIG00000010901) #15 lin28b (ENSOSIG00000010898) #18 prep (ENSOSIG00000010859) #21 ENSOSIG00000010856 ##22 xkr5a (ENSOSIG00000010855) tram2 (ENSOSIG00000010193) ENSOSIG00000010174 mrpl19 (ENSOSIG00000010172) mycn (ENSOSIG00000010146) smek1 (ENSOSIG00000010125) ERH (ENSOSIG00000010121) paplnb (ENSOSIG00000010119) PLEKHG1 (ENSOSIG00000010105) tcp1 (ENSOSIG00000010100) wtap (ENSOSIG00000010092) sod2 (ENSOSIG00000010013) FNDC1 (ENSOSIG00000010001) otofa (ENSOSIG00000009904) OSTM1 (ENSOSIG00000009900) Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Eupercaria ANCESTRAL SPECIES 16 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Tetraodontidae ANCESTRAL SPECIES 15 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00990000211308 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Tetraodon MODERN SPECIES 5 ENSTNIG00000001656 ENSTNIG00000012312 hpcal1 (ENSTNIG00000012311) pdia6 (ENSTNIG00000012310) ENSTNIG00000000657 rock2b (ENSTNIG00000012308) RHOB (ENSTNIG00000002278) SOBP (ENSTNIG00000012307) #31 ENSTNIG00000012306 ##25 ENSTNIG00000012305 #24 sim1a (ENSTNIG00000012304) #11 GRIK2 (ENSTNIG00000012303) #15 lin28b (ENSTNIG00000012302) #18 prep (ENSTNIG00000012301) #21 ENSTNIG00000001052 ENSTNIG00000012300 ##22 xkr5a (ENSTNIG00000012299) tram2 (ENSTNIG00000012298) efhc1 (ENSTNIG00000012297) ENSTNIG00000012296 mrpl19 (ENSTNIG00000012295) mycn (ENSTNIG00000012294) ENSTNIG00000012293 ENSTNIG00000012292 PLEKHG1 (ENSTNIG00000012291) tcp1 (ENSTNIG00000012290) acat2 (ENSTNIG00000012289) wtap (ENSTNIG00000012288) sod2 (ENSTNIG00000012287) ENSTNIG00000012286 ENSTNIG00000012285 Fugu MODERN SPECIES 7 kcnf1a (ENSTRUG00000018214) ENSTRUG00000020227 ENSTRUG00000021138 rock2b (ENSTRUG00000018218) sobpb (ENSTRUG00000024960) #31 ENSTRUG00000018242 ##25 ENSTRUG00000018250 #24 mrap2b (ENSTRUG00000028435) ENSTRUG00000031378 ripply2 (ENSTRUG00000018263) sim1a (ENSTRUG00000018267) #11 ENSTRUG00000027585 ENSTRUG00000018275 #15 lin28b (ENSTRUG00000028901) #18 prep (ENSTRUG00000008072) #21 ENSTRUG00000007847 ##22 xrg5 (ENSTRUG00000007765) tram2 (ENSTRUG00000007487) efhc1 (ENSTRUG00000007418) ENSTRUG00000023346 mrpl19 (ENSTRUG00000007313) mycn (ENSTRUG00000026111) smek1 (ENSTRUG00000006781) ERH (ENSTRUG00000024367) PLEKHG1 (ENSTRUG00000006405) tcp1 (ENSTRUG00000005967) wtap (ENSTRUG00000005409) sod2 (ENSTRUG00000005242) FNDC1 (ENSTRUG00000004949) otofa (ENSTRUG00000003831) ENSTRUG00000002802 Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Ballan wrasse MODERN SPECIES 164 pdia6 (ENSLBEG00000020065) kcnf1a (ENSLBEG00000020033) ENSLBEG00000020014 ENSLBEG00000019995 rock2b (ENSLBEG00000019702) sobpb (ENSLBEG00000019631) #31 ENSLBEG00000019609 ##25 ENSLBEG00000019571 #24 mrap2b (ENSLBEG00000019499) ripply2 (ENSLBEG00000019472) SIM1 (ENSLBEG00000019425) #11 ENSLBEG00000019401 GRIK2 (ENSLBEG00000019353) #15 lin28b (ENSLBEG00000019319) #18 prep (ENSLBEG00000019254) #21 ENSLBEG00000019209 ##22 xkr5a (ENSLBEG00000019188) tram2 (ENSLBEG00000019124) efhc1 (ENSLBEG00000019026) ENSLBEG00000018987 mrpl19 (ENSLBEG00000018949) mycn (ENSLBEG00000018913) smek1 (ENSLBEG00000018869) ERH (ENSLBEG00000018852) paplnb (ENSLBEG00000018826) Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Perciformes ANCESTRAL SPECIES 14 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Perciformes_a ANCESTRAL SPECIES 15 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Pike perch MODERN SPECIES 4 pdia6 (ENSSLUG00000002134) kcnf1a (ENSSLUG00000002330) ENSSLUG00000002335 rock2b (ENSSLUG00000002552) sobpb (ENSSLUG00000005661) #31 ENSSLUG00000005676 ##25 ENSSLUG00000005725 #24 mrap2b (ENSSLUG00000005770) ripply2 (ENSSLUG00000005777) SIM1 (ENSSLUG00000005789) #11 ENSSLUG00000005843 ENSSLUG00000005870 GRIK2 (ENSSLUG00000005914) #15 lin28b (ENSSLUG00000006062) #18 prep (ENSSLUG00000006096) #21 ENSSLUG00000006356 ##22 xkr5a (ENSSLUG00000006372) tram2 (ENSSLUG00000006387) efhc1 (ENSSLUG00000006412) ENSSLUG00000006429 mrpl19 (ENSSLUG00000006444) mycn (ENSSLUG00000006464) smek1 (ENSSLUG00000006567) ENSSLUG00000006670 paplnb (ENSSLUG00000006688) PLEKHG1 (ENSSLUG00000006706) tcp1 (ENSSLUG00000006740) acat2 (ENSSLUG00000006773) wtap (ENSSLUG00000006806) sod2 (ENSSLUG00000006819) FNDC1 (ENSSLUG00000006833) Channel bull blenny MODERN SPECIES 16 hpcal1 (ENSCGOG00000024416) pdia6 (ENSCGOG00000024424) kcnf1a (ENSCGOG00000024448) ENSCGOG00000024449 ENSCGOG00000024450 rock2b (ENSCGOG00000024519) sobpb (ENSCGOG00000024650) #31 ENSCGOG00000024651 ##25 ENSCGOG00000024658 #24 mrap2b (ENSCGOG00000024660) ripply2 (ENSCGOG00000024661) SIM1 (ENSCGOG00000024662) #11 GRIK2 (ENSCGOG00000024687) #15 lin28b (ENSCGOG00000024703) #18 prep (ENSCGOG00000024704) #21 ENSCGOG00000024705 ##22 xkr5a (ENSCGOG00000024706) tram2 (ENSCGOG00000024708) efhc1 (ENSCGOG00000024709) ENSCGOG00000024710 mrpl19 (ENSCGOG00000024711) mycn (ENSCGOG00000024712) smek1 (ENSCGOG00000002846) ENSCGOG00000003736 paplnb (ENSCGOG00000003759) PLEKHG1 (ENSCGOG00000003765) tcp1 (ENSCGOG00000003796) acat2 (ENSCGOG00000004647) wtap (ENSCGOG00000004978) sod2 (ENSCGOG00000005042) FNDC1 (ENSCGOG00000005216) Cottioidei ANCESTRAL SPECIES 25 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000173939 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 Lumpfish MODERN SPECIES 16 hpcal1 (ENSCLMG00005020655) pdia6 (ENSCLMG00005020652) kcnf1a (ENSCLMG00005020650) ENSCLMG00005020647 rock2b (ENSCLMG00005017154) sobpb (ENSCLMG00005017057) #31 ENSCLMG00005017056 ##25 ENSCLMG00005017055 #24 mrap2b (ENSCLMG00005017054) ripply2 (ENSCLMG00005017052) SIM1 (ENSCLMG00005017051) #11 ENSCLMG00005017045 ENSCLMG00005017029 #15 lin28b (ENSCLMG00005017026) #18 prep (ENSCLMG00005017023) #21 ENSCLMG00005017020 ##22 xkr5a (ENSCLMG00005017019) tram2 (ENSCLMG00005017015) efhc1 (ENSCLMG00005016685) ENSCLMG00005016683 ENSCLMG00005016681 mrpl19 (ENSCLMG00005016679) mycn (ENSCLMG00005016668) smek1 (ENSCLMG00005016666) ENSCLMG00005016660 paplnb (ENSCLMG00005016654) PLEKHG1 (ENSCLMG00005016652) ENSCLMG00005016650 tcp1 (ENSCLMG00005016643) acat2 (ENSCLMG00005016642) wtap (ENSCLMG00005016640) Stickleback MODERN SPECIES 18 hpcal1 (ENSGACG00000009616) pdia6 (ENSGACG00000009586) kcnf1a (ENSGACG00000009584) ENSGACG00000009580 rock2b (ENSGACG00000009555) ENSGACG00000009552 #31 ENSGACG00000009547 #31 ENSGACG00000009546 ENSGACG00000009538 ##25 ENSGACG00000009504 #24 mrap2b (ENSGACG00000009500) SIM1 (ENSGACG00000009479) #11 GRIK2 (ENSGACG00000009432) #15 lin28b (ENSGACG00000009428) #18 prep (ENSGACG00000009366) #21 ENSGACG00000009358 ##22 xkr5a (ENSGACG00000009350) tram2 (ENSGACG00000009285) efhc1 (ENSGACG00000009276) ENSGACG00000009272 mrpl19 (ENSGACG00000009248) mycn (ENSGACG00000009241) smek1 (ENSGACG00000009228) ERH (ENSGACG00000009220) paplnb (ENSGACG00000009212) ENSGACG00000009211 PLEKHG1 (ENSGACG00000009204) tcp1 (ENSGACG00000009066) acat2 (ENSGACG00000009052) wtap (ENSGACG00000009045) sod2 (ENSGACG00000009000) Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.b ENSGT00940000165355.a ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Large yellow croaker MODERN SPECIES 482 pdia6 (ENSLCRG00005004117) kcnf1a (ENSLCRG00005004468) ENSLCRG00005004470 rock2b (ENSLCRG00005004489) sobpb (ENSLCRG00005004974) #31 ENSLCRG00005004975 ##25 ENSLCRG00005004977 ##25 ENSLCRG00005004980 #24 mrap2b (ENSLCRG00005004981) ripply2 (ENSLCRG00005004982) SIM1 (ENSLCRG00005004983) #11 ENSLCRG00005004997 GRIK2 (ENSLCRG00005005010) #15 lin28b (ENSLCRG00005006382) #18 prep (ENSLCRG00005006387) #21 ENSLCRG00005006593 ##22 xkr5a (ENSLCRG00005006598) tram2 (ENSLCRG00005006604) efhc1 (ENSLCRG00005007099) ENSLCRG00005007101 mrpl19 (ENSLCRG00005007103) mycn (ENSLCRG00005007105) smek1 (ENSLCRG00005007143) ENSLCRG00005007166 ENSLCRG00005007167 paplnb (ENSLCRG00005007170) PLEKHG1 (ENSLCRG00005007177) tcp1 (ENSLCRG00005007185) acat2 (ENSLCRG00005007190) wtap (ENSLCRG00005007191) sod2 (ENSLCRG00005007192) Gilthead seabream MODERN SPECIES 14 ENSSAUG00010015355 ENSSAUG00010015356 rock2b (ENSSAUG00010015365) sobpb (ENSSAUG00010015462) #31 ENSSAUG00010015463 ENSSAUG00010015465 ##25 ENSSAUG00010015478 #24 mrap2b (ENSSAUG00010015482) ripply2 (ENSSAUG00010015483) ENSSAUG00010015484 SIM1 (ENSSAUG00010015487) #11 ENSSAUG00010015520 GRIK2 (ENSSAUG00010015544) #15 lin28b (ENSSAUG00010015808) #18 prep (ENSSAUG00010015819) #21 ENSSAUG00010015854 ##22 xkr5a (ENSSAUG00010015857) tram2 (ENSSAUG00010015861) efhc1 (ENSSAUG00010015930) ENSSAUG00010015932 mrpl19 (ENSSAUG00010015939) mycn (ENSSAUG00010015944) smek1 (ENSSAUG00010015958) ERH (ENSSAUG00010016632) paplnb (ENSSAUG00010016633) PLEKHG1 (ENSSAUG00010016638) tcp1 (ENSSAUG00010008729) acat2 (ENSSAUG00010008737) wtap (ENSSAUG00010009317) sod2 (ENSSAUG00010009320) FNDC1 (ENSSAUG00010009326) Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Anabantaria ANCESTRAL SPECIES 20 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Zig-zag eel MODERN SPECIES 16 ENSMAMG00000006214 pdia6 (ENSMAMG00000006245) ENSMAMG00000006291 ENSMAMG00000006304 ENSMAMG00000026793 ENSMAMG00000006313 sobpb (ENSMAMG00000006443) #31 ENSMAMG00000006461 ##25 ENSMAMG00000006468 #24 mrap2b (ENSMAMG00000006531) ripply2 (ENSMAMG00000006564) ENSMAMG00000006584 #11 ENSMAMG00000006597 #15 ENSMAMG00000006635 #18 prep (ENSMAMG00000006757) #21 ENSMAMG00000006790 ##22 xkr5a (ENSMAMG00000006796) tram2 (ENSMAMG00000024315) efhc1 (ENSMAMG00000006869) ENSMAMG00000006878 ENSMAMG00000006902 mycn (ENSMAMG00000006908) ENSMAMG00000006925 ENSMAMG00000006967 paplnb (ENSMAMG00000007053) ENSMAMG00000007068 TCP1 (ENSMAMG00000007085) acat2 (ENSMAMG00000007108) wtap (ENSMAMG00000027304) sod2 (ENSMAMG00000007154) FNDC1 (ENSMAMG00000007183) Anabantoidei ANCESTRAL SPECIES 15 ENSGT00940000154645.A ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Climbing perch MODERN SPECIES 15 pdia6 (ENSATEG00000014568) ENSATEG00000014562 ENSATEG00000014555 ENSATEG00000014546 ENSATEG00000014458 sobpb (ENSATEG00000014428) #31 ENSATEG00000014409 ##25 ENSATEG00000014355 #24 mrap2b (ENSATEG00000014317) ripply2 (ENSATEG00000014300) ENSATEG00000014254 #11 ENSATEG00000014211 ENSATEG00000014169 #15 ENSATEG00000014088 #18 prep (ENSATEG00000014056) #21 ENSATEG00000014034 ##22 xkr5a (ENSATEG00000014004) tram2 (ENSATEG00000013975) ENSATEG00000013913 ENSATEG00000027883 ENSATEG00000013886 mycn (ENSATEG00000029948) ENSATEG00000013845 ENSATEG00000026335 paplnb (ENSATEG00000013766) ENSATEG00000013758 TCP1 (ENSATEG00000013715) acat2 (ENSATEG00000013681) wtap (ENSATEG00000013657) sod2 (ENSATEG00000013630) FNDC1 (ENSATEG00000025404) Siamese fighting fish MODERN SPECIES 13 apobb.1 (ENSBSLG00000016737) hpcal1 (ENSBSLG00000016572) pdia6 (ENSBSLG00000015243) kcnf1a (ENSBSLG00000015151) ENSBSLG00000014981 rock2b (ENSBSLG00000013667) sobpb (ENSBSLG00000013586) #31 ENSBSLG00000013531 ##25 ENSBSLG00000013374 #24 mrap2b (ENSBSLG00000013345) ripply2 (ENSBSLG00000013340) sim1a (ENSBSLG00000013187) #11 GRIK2 (ENSBSLG00000010881) #15 lin28b (ENSBSLG00000010592) #18 prep (ENSBSLG00000010035) #21 ENSBSLG00000010007 ##22 xkr5a (ENSBSLG00000009977) tram2 (ENSBSLG00000009183) efhc1 (ENSBSLG00000008976) ENSBSLG00000008936 mrpl19 (ENSBSLG00000008908) mycn (ENSBSLG00000008457) smek1 (ENSBSLG00000008129) ERH (ENSBSLG00000008104) paplnb (ENSBSLG00000008077) PLEKHG1 (ENSBSLG00000008026) tcp1 (ENSBSLG00000007940) wtap (ENSBSLG00000007744) sod2 (ENSBSLG00000007119) FNDC1 (ENSBSLG00000007069) drc1 (ENSBSLG00000007006) Carangaria ANCESTRAL SPECIES 18 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a.k ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Turbot MODERN SPECIES 12 ENSSMAG00000018079 pdia6 (ENSSMAG00000018025) ENSSMAG00000018014 ENSSMAG00000035449 ENSSMAG00000017999 ENSSMAG00000017748 sobpb (ENSSMAG00000017709) #31 ENSSMAG00000017692 ##25 ENSSMAG00000017644 #24 mrap2b (ENSSMAG00000035004) ripply2 (ENSSMAG00000033898) ENSSMAG00000017594 #11 ENSSMAG00000017553 #15 ENSSMAG00000032293 #18 prep (ENSSMAG00000017534) #21 ENSSMAG00000017518 ##22 xkr5a (ENSSMAG00000017512) tram2 (ENSSMAG00000017472) ENSSMAG00000017458 ENSSMAG00000017419 ENSSMAG00000017409 mycn (ENSSMAG00000017400) ENSSMAG00000017349 paplnb (ENSSMAG00000017290) ENSSMAG00000017272 TCP1 (ENSSMAG00000017148) wtap (ENSSMAG00000017133) sod2 (ENSSMAG00000017117) FNDC1 (ENSSMAG00000017056) otofa (ENSSMAG00000016888) ENSSMAG00000016874 Tongue sole MODERN SPECIES 17 ENSCSEG00000000434 sod2 (ENSCSEG00000000427) wtap (ENSCSEG00000000408) acat2 (ENSCSEG00000000403) tcp1 (ENSCSEG00000000387) efhc1 (ENSCSEG00000000379) efhc1 (ENSCSEG00000000362) ENSCSEG00000000354 mrpl19 (ENSCSEG00000000349) mycn (ENSCSEG00000000346) smek1 (ENSCSEG00000000332) ENSCSEG00000000321 paplnb (ENSCSEG00000000314) lin28b (ENSCSEG00000000312) #18 prep (ENSCSEG00000000307) #21 ENSCSEG00000000305 ##22 xkr5a (ENSCSEG00000000301) tram2 (ENSCSEG00000000292) PLEKHG1 (ENSCSEG00000000275) ENSCSEG00000021038 GRIK2 (ENSCSEG00000021035) #15 ENSCSEG00000021033 ENSCSEG00000021032 SIM1 (ENSCSEG00000020985) #11 ripply2 (ENSCSEG00000020982) mrap2b (ENSCSEG00000020979) ENSCSEG00000020976 #24 ENSCSEG00000020974 ##25 sobpb (ENSCSEG00000020972) #31 rock2b (ENSCSEG00000020966) ENSCSEG00000020965 Carangaria_A ANCESTRAL SPECIES 13 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 ENSGT00530000063558.B Seriola ANCESTRAL SPECIES 4 ENSGT00940000155646 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT01030000234517.C ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000161952 ENSGT00940000156143.a.b #11 ENSGT00390000008152.A ENSGT00940000155610.o.a #15 ENSGT00940000153295.b #18 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.a ENSGT00940000156891.a.b ENSGT00940000180577 ENSGT00940000157723 ENSGT00550000074878 ENSGT01030000234626.B ENSGT00390000013931 ENSGT00390000011877 Greater amberjack MODERN SPECIES 10 hpcal1 (ENSSDUG00000001070) pdia6 (ENSSDUG00000001028) kcnf1a (ENSSDUG00000001015) ENSSDUG00000001004 rock2b (ENSSDUG00000000886) sobpb (ENSSDUG00000000854) #31 ENSSDUG00000000843 ##25 ENSSDUG00000000828 #24 mrap2b (ENSSDUG00000000804) ripply2 (ENSSDUG00000000798) SIM1 (ENSSDUG00000000756) #11 ENSSDUG00000000729 GRIK2 (ENSSDUG00000000651) #15 lin28b (ENSSDUG00000000613) #18 prep (ENSSDUG00000000552) #21 ENSSDUG00000000524 ##22 xkr5a (ENSSDUG00000000511) tram2 (ENSSDUG00000000462) efhc1 (ENSSDUG00000000447) mrpl19 (ENSSDUG00000000420) mycn (ENSSDUG00000000413) ENSSDUG00000000392 smek1 (ENSSDUG00000000333) ENSSDUG00000000320 paplnb (ENSSDUG00000000272) ENSSDUG00000000256 PLEKHG1 (ENSSDUG00000000241) tcp1 (ENSSDUG00000000173) acat2 (ENSSDUG00000000092) wtap (ENSSDUG00000020070) sod2 (ENSSDUG00000020057) Yellowtail amberjack MODERN SPECIES 2936 hpcal1 (ENSSLDG00000001335) pdia6 (ENSSLDG00000001363) kcnf1a (ENSSLDG00000001418) ENSSLDG00000001439 ENSSLDG00000001449 rock2b (ENSSLDG00000001463) sobpb (ENSSLDG00000001609) #31 ENSSLDG00000001617 ##25 ENSSLDG00000001627 #24 mrap2b (ENSSLDG00000001700) ripply2 (ENSSLDG00000001710) SIM1 (ENSSLDG00000001728) #11 GRIK2 (ENSSLDG00000001796) #15 lin28b (ENSSLDG00000001858) #18 prep (ENSSLDG00000001885) #21 ENSSLDG00000001957 ##22 xkr5a (ENSSLDG00000001988) tram2 (ENSSLDG00000002009) efhc1 (ENSSLDG00000002071) ENSSLDG00000002152 mrpl19 (ENSSLDG00000002195) mycn (ENSSLDG00000002226) smek1 (ENSSLDG00000002251) ENSSLDG00000002313 paplnb (ENSSLDG00000002342) ENSSLDG00000002356 PLEKHG1 (ENSSLDG00000002378) Barramundi perch MODERN SPECIES 66 lin28b (ENSLCAG00010018392) #18 prep (ENSLCAG00010018417) #21 ENSLCAG00010018515 ##22 xkr5a (ENSLCAG00010018520) tram2 (ENSLCAG00010018539) efhc1 (ENSLCAG00010018596) ENSLCAG00010018604 mrpl19 (ENSLCAG00010018614) ENSLCAG00010018617 ENSLCAG00010018621 smek1 (ENSLCAG00010018636) ENSLCAG00010018662 paplnb (ENSLCAG00010018672) PLEKHG1 (ENSLCAG00010018681) tcp1 (ENSLCAG00010018702) acat2 (ENSLCAG00010018750) wtap (ENSLCAG00010018762) sod2 (ENSLCAG00010018771) Pinecone sodierfish MODERN SPECIES 16 pdia6 (ENSMMDG00005019824) kcnf1a (ENSMMDG00005020047) ENSMMDG00005020049 ENSMMDG00005020052 rock2b (ENSMMDG00005020143) sobpb (ENSMMDG00005022319) #31 ENSMMDG00005022327 ##25 ENSMMDG00005022330 #24 mrap2b (ENSMMDG00005022331) ripply2 (ENSMMDG00005022332) SIM1 (ENSMMDG00005022333) #11 ENSMMDG00005022349 GRIK2 (ENSMMDG00005022353) #15 lin28b (ENSMMDG00005022386) #18 prep (ENSMMDG00005022389) #21 ENSMMDG00005022404 ##22 xkr5a (ENSMMDG00005022407) tram2 (ENSMMDG00005022412) efhc1 (ENSMMDG00005022444) ENSMMDG00005022446 ENSMMDG00005022447 mrpl19 (ENSMMDG00005022448) mycn (ENSMMDG00005022449) smek1 (ENSMMDG00005022460) ENSMMDG00005022836 paplnb (ENSMMDG00005022838) PLEKHG1 (ENSMMDG00005022840) tcp1 (ENSMMDG00005022846) acat2 (ENSMMDG00005022853) wtap (ENSMMDG00005022860) sod2 (ENSMMDG00005022866) Cod MODERN SPECIES 13 ENSGMOG00000006775 ENSGMOG00000028948 ENSGMOG00000006736 ENSGMOG00000006950 sobpb (ENSGMOG00000028712) #31 ENSGMOG00000006690 ##25 ENSGMOG00000006665 #24 mrap2b (ENSGMOG00000030530) ENSGMOG00000033996 ENSGMOG00000034681 ENSGMOG00000006637 #11 ENSGMOG00000010729 ENSGMOG00000036944 #15 ENSGMOG00000010704 #18 ENSGMOG00000010685 #21 ENSGMOG00000029401 ##22 mideasa (ENSGMOG00000033850) ttbk2b (ENSGMOG00000000171) churc1 (ENSGMOG00000000176) ENSGMOG00000000179 ENSGMOG00000000192 ENSGMOG00000028394 nrbp1 (ENSGMOG00000000204) ENSGMOG00000000212 ENSGMOG00000024171 rhag (ENSGMOG00000000218) rd3 (ENSGMOG00000029833) ENSGMOG00000035602 slc30a1a (ENSGMOG00000035797) nek2 (ENSGMOG00000000237) ENSGMOG00000032380 Protacanthopterygii ANCESTRAL SPECIES 153 ENSGT00940000154164.c.b #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a #24 ENSGT00940000167806 ENSGT00940000156143.a.b #11 ENSGT00940000155610.o.a.b #15 ENSGT00940000155610.o.a.a #15 ENSGT00530000063426.b.b #21 ENSGT00940000154798.a.d.b ##22 ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415 ENSGT00940000158432 ENSGT00390000018199.a ENSGT00390000003316.c.b.a.f ENSGT00940000156891.a.b ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a ENSGT00940000156528.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 301 ENSGT01030000234517.C.e ENSGT00940000154164.c.b.g #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a.b.a #24 ENSGT00940000155695.i.a.b.b #24 ENSGT00940000167806 ENSGT00940000161952.c ENSGT00940000156143.a.b.a #11 ENSGT00940000155610.o.a.a #15 ENSGT00940000153295.b.j.b #18 ENSGT00530000063426.b.b.i #21 ENSGT00940000154798.a.d.b.e ##22 ENSGT01070000253766.A.a.a.b.a.b.d ENSGT00510000046470.a.b.f ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.e ENSGT00940000163305.b ENSGT00390000009415 ENSGT00940000158432.c ENSGT00390000018199.a.e ENSGT00390000003316.c.b.a.f.a ENSGT00940000156891.a.b.c ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a Huchen MODERN SPECIES 2097 lin28b (ENSHHUG00000019806) #18 prep (ENSHHUG00000019768) #21 ENSHHUG00000019766 ENSHHUG00000019750 ##22 xkr5a (ENSHHUG00000019744) tram2 (ENSHHUG00000019665) efhc1 (ENSHHUG00000019652) ENSHHUG00000019649 Salmoninae_a ANCESTRAL SPECIES 68 ENSGT01030000234517.C.e ENSGT00940000154164.c.b.g #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a.b.a #24 ENSGT00940000155695.i.a.b.b #24 ENSGT00940000167806 ENSGT00940000161952.c ENSGT00940000156143.a.b.a #11 ENSGT00940000155610.o.a.a #15 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.a.a.a.a.b ENSGT00940000153295.b.j.b #18 ENSGT00530000063426.b.b.i #21 ENSGT00940000154798.a.d.b.e ##22 ENSGT01070000253766.A.a.a.b.a.b.d ENSGT00510000046470.a.b.f ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.e ENSGT00390000009415 ENSGT00940000158432.c ENSGT00390000018199.a.e ENSGT00390000003316.c.b.a.f.a ENSGT00940000156891.a.b.c ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a ENSGT00940000156528.d Salmo ANCESTRAL SPECIES 52 ENSGT00940000160213.b ENSGT00940000165355.a ENSGT00940000165355.b ENSGT00940000153916.B ENSGT01030000234517.C.e ENSGT00940000154164.c.b.g #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a.b.a #24 ENSGT00940000155695.i.a.b.b #24 ENSGT00940000167806 ENSGT00940000156143.a.b.a #11 ENSGT00940000155610.o.a.a #15 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.a.a.a.a.b ENSGT00940000153295.b.j.b #18 ENSGT00530000063426.b.b.i #21 ENSGT00940000154798.a.d.b.e ##22 ENSGT01070000253766.A.a.a.b.a.b.d ENSGT00510000046470.a.b.f ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.e ENSGT00390000009415.e ENSGT00940000158432.c ENSGT00390000018199.a.e ENSGT00390000003316.c.b.a.f.a ENSGT00940000156891.a.b.c ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a ENSGT00940000156528.d Atlantic salmon MODERN SPECIES 6 SLC66A3 (ENSSSAG00000090794) ENSSSAG00000113872 ROCK2 (ENSSSAG00000064027) sobpb (ENSSSAG00000063986) #31 ENSSSAG00000063964 ##25 ENSSSAG00000063932 #24 ENSSSAG00000112244 #24 mrap2b (ENSSSAG00000063916) ENSSSAG00000063914 ENSSSAG00000063907 ENSSSAG00000063827 #11 ENSSSAG00000063817 ENSSSAG00000063387 #15 ENSSSAG00000063348 #18 prep (ENSSSAG00000062986) #21 ENSSSAG00000062775 ##22 xkr5a (ENSSSAG00000062758) tram2 (ENSSSAG00000062650) efhc1 (ENSSSAG00000062548) ENSSSAG00000114672 mrpl19 (ENSSSAG00000062462) mycn (ENSSSAG00000042845) smek1 (ENSSSAG00000042928) ERH (ENSSSAG00000047832) paplnb (ENSSSAG00000047878) ENSSSAG00000084414 ENSSSAG00000116544 ENSSSAG00000047926 ENSSSAG00000047945 ENSSSAG00000047958 ENSSSAG00000047965 River trout MODERN SPECIES 28 pdia6 (ENSSTUG00000016063) kcnf1a (ENSSTUG00000016502) ENSSTUG00000016512 ENSSTUG00000016527 SLC66A3 (ENSSTUG00000016528) ROCK2 (ENSSTUG00000016552) sobpb (ENSSTUG00000016878) #31 ENSSTUG00000016885 ##25 ENSSTUG00000016922 #24 mrap2b (ENSSTUG00000016983) SIM1 (ENSSTUG00000016991) #11 GRIK2 (ENSSTUG00000017251) #15 ENSSTUG00000020515 lin28b (ENSSTUG00000020522) #18 prep (ENSSTUG00000020556) #21 ENSSTUG00000021585 ##22 xkr5a (ENSSTUG00000021668) tram2 (ENSSTUG00000021701) efhc1 (ENSSTUG00000022166) ENSSTUG00000022194 ENSSTUG00000022210 mrpl19 (ENSSTUG00000022247) mycn (ENSSTUG00000022252) smek1 (ENSSTUG00000022365) erh (ENSSTUG00000025437) paplnb (ENSSTUG00000025471) ENSSTUG00000025509 ENSSTUG00000025520 spint1b (ENSSTUG00000025538) ppp1r14d (ENSSTUG00000025564) ENSSTUG00000025572 Oncorhynchus ANCESTRAL SPECIES 55 ENSGT01030000234517.C.e ENSGT00940000154164.c.b.g #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a.b.a #24 ENSGT00940000155695.i.a.b.b #24 ENSGT00940000155695.i.a.a #24 ENSGT00940000167806 ENSGT00940000161952.c ENSGT00940000156143.a.b.a #11 ENSGT00940000155610.o.a.a #15 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.a.a.a.a.b ENSGT00940000153295.b.j.b #18 ENSGT00530000063426.b.b.i #21 ENSGT00940000154798.a.d.b.e ##22 ENSGT01070000253766.A.a.a.b.a.b.d ENSGT00510000046470.a.b.f ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.e ENSGT00390000009415 ENSGT00940000158432.c ENSGT00390000018199.a.e ENSGT00390000003316.c.b.a.f.a ENSGT00940000156891.a.b.c ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a ENSGT00940000156528.d Oncorhynchus_a ANCESTRAL SPECIES 65 ENSGT01030000234517.C.e ENSGT00940000154164.c.b.g #31 ENSGT00880000138028.b.a ##25 ENSGT00940000155695.i.a.b.a #24 ENSGT00940000155695.i.a.b.b #24 ENSGT00940000167806 ENSGT00940000161952.c ENSGT00940000156143.a.b.a #11 ENSGT00940000155610.o.a.a #15 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.a.a.a.a.b ENSGT00940000153295.b.j.b #18 ENSGT00530000063426.b.b.i #21 ENSGT00940000154798.a.d.b.e ##22 ENSGT01070000253766.A.a.a.b.a.b.d ENSGT00510000046470.a.b.f ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.e ENSGT00390000009415 ENSGT00940000158432.c ENSGT00390000018199.a.e ENSGT00390000003316.c.b.a.f.a ENSGT00940000156891.a.b.c ENSGT00730000111686.f ENSGT00940000156521.b ENSGT00940000164935.b ENSGT00950000182985.a.a.b.a ENSGT00940000158912.j.a ENSGT00940000156528.d Coho salmon MODERN SPECIES 3 kcnf1a (ENSOKIG00005005806) SLC66A3 (ENSOKIG00005005791) ROCK2 (ENSOKIG00005005634) sobpb (ENSOKIG00005005571) #31 ENSOKIG00005005566 ENSOKIG00005005517 ##25 ENSOKIG00005005448 #24 ENSOKIG00005005439 #24 mrap2b (ENSOKIG00005005432) ENSOKIG00005005428 SIM1 (ENSOKIG00005005391) #11 ENSOKIG00005005368 GRIK2 (ENSOKIG00005003672) #15 lin28b (ENSOKIG00005003538) #18 ENSOKIG00005003497 #21 ENSOKIG00005003463 ##22 xkr5a (ENSOKIG00005003449) tram2 (ENSOKIG00005003419) efhc1 (ENSOKIG00005003397) ENSOKIG00005003376 mrpl19 (ENSOKIG00005003362) mycn (ENSOKIG00005003352) smek1 (ENSOKIG00005002440) erh (ENSOKIG00005002225) paplnb (ENSOKIG00005002198) ENSOKIG00005002172 PLEKHG3 (ENSOKIG00005002115) ENSOKIG00005002066 ENSOKIG00005002043 ENSOKIG00005002024 ENSOKIG00005002003 Rainbow trout MODERN SPECIES 29 pdia6 (ENSOMYG00000009207) KCNF1 (ENSOMYG00000008952) ENSOMYG00000008942 ENSOMYG00000008931 SLC66A3 (ENSOMYG00000008929) ROCK2 (ENSOMYG00000008329) sobpb (ENSOMYG00000055556) #31 ENSOMYG00000007174 ##25 ENSOMYG00000007034 #24 mrap2b (ENSOMYG00000006808) ENSOMYG00000006773 #11 ENSOMYG00000049143 ENSOMYG00000006554 #15 ENSOMYG00000006059 #18 prep (ENSOMYG00000005745) #21 ENSOMYG00000005214 ##22 xkr5a (ENSOMYG00000005163) tram2 (ENSOMYG00000005145) ENSOMYG00000005108 ENSOMYG00000004980 ENSOMYG00000004959 mycn (ENSOMYG00000004942) ENSOMYG00000059366 smek1 (ENSOMYG00000004771) erh (ENSOMYG00000004566) paplnb (ENSOMYG00000004534) ENSOMYG00000004507 ENSOMYG00000066911 ENSOMYG00000004426 ENSOMYG00000004330 ENSOMYG00000056790 Salmoninae ANCESTRAL SPECIES 927 ENSGT00940000155610.o.a.b #15 ENSGT00940000153295.b.j.a #18 ENSGT00530000063426.b.b.j #21 ENSGT00940000154798.a.d.b.f ##22 ENSGT01070000253766.A.a.a.b.a.b.c ENSGT00510000046470.a.b.e ENSGT00940000154096.b.b.a.f Salmoninae_a ANCESTRAL SPECIES 104 ENSGT00940000157459.a.h ENSGT00940000163503.B.c.l ENSGT00940000163503.B.d ENSGT00940000153446.b.w ENSGT00940000157575 ENSGT00950000182945.b.a.a.b.b.b.u ENSGT00940000154645.A.e.b ENSGT00940000155646.l ENSGT01030000234517.C.f ENSGT00940000154164.c.b.h #31 ENSGT00940000161952.d ENSGT00940000156143.a.b.b #11 ENSGT00940000155610.o.a.b #15 ENSGT00940000153295.b.j.a #18 ENSGT00530000063426.b.b.j #21 ENSGT00940000154798.a.d.b.f ##22 ENSGT01070000253766.A.a.a.b.a.b.c ENSGT00510000046470.a.b.e ENSGT00940000154096.b.b.a.f ENSGT00940000158432.d ENSGT00390000018199.a.f ENSGT00390000003316.c.b.a.f.b ENSGT00940000156891.a.b.d ENSGT00940000173579 ENSGT00940000157501.f ENSGT00940000159887.b ENSGT00940000154746.a.b ENSGT00950000182772.A.a.b.`b.b.h ENSGT01030000234848.b ENSGT00940000154862.x.a.b.a.b ENSGT00390000016478.e.a Salmo ANCESTRAL SPECIES 12 ENSGT00940000165020.a.g ENSGT00940000157459.a.h ENSGT00940000163503.B.d ENSGT00940000153446.b.w ENSGT00940000157575 ENSGT00950000182945.b.a.a.b.b.b.u ENSGT00940000154645.A.e.b ENSGT00940000155646.l ENSGT01030000234517.C.f ENSGT00940000154164.c.b.h #31 ENSGT00940000161952.d ENSGT00940000156143.a.b.b #11 ENSGT00940000155610.o.a.b #15 ENSGT00940000153295.b.j.a #18 ENSGT00530000063426.b.b.j #21 ENSGT00940000154798.a.d.b.f ##22 ENSGT01070000253766.A.a.a.b.a.b.c ENSGT00510000046470.a.b.e ENSGT00940000154096.b.b.a.f ENSGT00390000009415.f ENSGT00940000158432.d ENSGT00390000018199.a.f ENSGT00390000003316.c.b.a.f.b ENSGT00940000156891.a.b.d ENSGT00940000157501.f ENSGT00940000159887.b ENSGT00940000154746.a.b ENSGT00950000182772.A.a.b.`b.b.h ENSGT00940000154862.x.a.b.a.b ENSGT00390000016478.e.a ENSGT00940000164834.b.f River trout MODERN SPECIES ENSSTUG00000047742 ENSSTUG00000047685 laptm4a (ENSSTUG00000047662) PUM2 (ENSSTUG00000047362) RHOB (ENSSTUG00000047343) hpcal1 (ENSSTUG00000047337) pdia6 (ENSSTUG00000047211) ENSSTUG00000047193 ROCK2 (ENSSTUG00000047053) SOBP (ENSSTUG00000047032) #31 ENSSTUG00000047025 SIM1 (ENSSTUG00000046997) #11 ENSSTUG00000046095 #15 lin28b (ENSSTUG00000046034) #18 prep (ENSSTUG00000045834) #21 ENSSTUG00000045809 ##22 xkr5a (ENSSTUG00000045797) tram2 (ENSSTUG00000045717) ENSSTUG00000045687 mrpl19 (ENSSTUG00000045658) mycn (ENSSTUG00000045646) smek1 (ENSSTUG00000044510) erh (ENSSTUG00000044468) paplnb (ENSSTUG00000044428) ENSSTUG00000044421 ENSSTUG00000039464 ckbb (ENSSTUG00000039323) mark3b (ENSSTUG00000038826) eif5 (ENSSTUG00000038697) si:dkeyp-72h1.1 (ENSSTUG00000038664) cdc42bpb (ENSSTUG00000037407) Atlantic salmon MODERN SPECIES 25 ENSSSAG00000046832 RHOB (ENSSSAG00000091726) ENSSSAG00000046676 PDIA6 (ENSSSAG00000046143) ENSSSAG00000108594 ENSSSAG00000008433 ENSSSAG00000008185 #31 ENSSSAG00000008180 ENSSSAG00000008040 #11 ENSSSAG00000007819 #15 ENSSSAG00000090672 ENSSSAG00000116646 ENSSSAG00000105475 ENSSSAG00000086141 #18 prep (ENSSSAG00000007650) #21 ENSSSAG00000120858 ##22 xkr5a (ENSSSAG00000007629) ENSSSAG00000114918 tram2 (ENSSSAG00000007615) ENSSSAG00000007605 ENSSSAG00000100736 ENSSSAG00000032979 mycn (ENSSSAG00000107853) smek1 (ENSSSAG00000002811) erh (ENSSSAG00000003730) ENSSSAG00000088042 paplnb (ENSSSAG00000094083) ENSSSAG00000115651 zbtb1 (ENSSSAG00000103681) ENSSSAG00000003760 MTHFD1 (ENSSSAG00000003941) Oncorhynchus ANCESTRAL SPECIES 25 ENSGT00940000165020.a.g ENSGT00940000157459.a.h ENSGT00940000163503.B.d.e ENSGT00940000153446.b.w ENSGT00940000157575 ENSGT00950000182945.b.a.a.b.b.b.u ENSGT00940000154645.A.e.b ENSGT00940000155646.l ENSGT01030000234517.C.f ENSGT00940000154164.c.b.h #31 ENSGT00940000161952.d ENSGT00940000156143.a.b.b #11 ENSGT00940000155610.o.a.b #15 ENSGT00940000153295.b.j.a #18 ENSGT00530000063426.b.b.j #21 ENSGT00940000154798.a.d.b.f ##22 ENSGT00940000153556.A.l.b ENSGT01070000253766.A.a.a.b.a.b.c ENSGT00510000046470.a.b.e ENSGT00940000154096.b.b.a.f ENSGT00940000158432.d ENSGT00390000018199.a.f ENSGT00390000003316.c.b.a.f.b ENSGT00940000156891.a.b.d ENSGT00940000157501.f ENSGT00940000159887.b ENSGT00940000154746.a.b ENSGT00950000182772.A.a.b.`b.b.h ENSGT00940000154862.x.a.b.a.b ENSGT00390000016478.e.a ENSGT00940000164834.b.f Oncorhynchus_a ANCESTRAL SPECIES 17 ENSGT00940000163503.B.c.l ENSGT00940000163503.B.d.f.a.b.b.a ENSGT00940000153446.b.w ENSGT00940000157575 ENSGT00950000182945.b.a.a.b.b.b.u ENSGT00940000154645.A.e.b ENSGT00940000155646.l ENSGT01030000234517.C.f ENSGT00940000154164.c.b.h #31 ENSGT00940000161952.d ENSGT00940000156143.a.b.b #11 ENSGT00940000155610.o.a.b #15 ENSGT00940000153295.b.j.a #18 ENSGT00530000063426.b.b.j #21 ENSGT00940000154798.a.d.b.f ##22 ENSGT00940000153556.A.l.b ENSGT01070000253766.A.a.a.b.a.b.c ENSGT00510000046470.a.b.e ENSGT00940000154096.b.b.a.f ENSGT00940000158432.d ENSGT00990000211308 ENSGT00390000003316.c.b.a.f.b ENSGT00940000156891.a.b.d ENSGT00940000157501.f ENSGT00940000159887.b ENSGT00940000154746.a.b ENSGT00950000182772.A.a.b.`b.b.h ENSGT00940000154862.x.a.b.a.b ENSGT00390000016478.e.a ENSGT00940000164834.b.f Chinook salmon MODERN SPECIES 355 ENSOTSG00005024249 ##22 RUVBL1 (ENSOTSG00005024247) xkr5a (ENSOTSG00005024245) tram2 (ENSOTSG00005024140) Coho salmon MODERN SPECIES 13 PUM2 (ENSOKIG00005025299) RHOB (ENSOKIG00005025169) HPCAL1 (ENSOKIG00005025132) PDIA6 (ENSOKIG00005024230) ENSOKIG00005024158 ROCK2 (ENSOKIG00005023725) SOBP (ENSOKIG00005023687) #31 ENSOKIG00005023643 ENSOKIG00005023636 SIM1 (ENSOKIG00005023595) #11 ENSOKIG00005019325 #15 ENSOKIG00005019011 ENSOKIG00005018990 LIN28B (ENSOKIG00005018979) #18 PREP (ENSOKIG00005018549) #21 ENSOKIG00005018516 ##22 RUVBL1 (ENSOKIG00005018508) xkr5a (ENSOKIG00005018502) TRAM2 (ENSOKIG00005018456) ENSOKIG00005018435 mycn (ENSOKIG00005018427) ENSOKIG00005018312 erh (ENSOKIG00005018282) paplnb (ENSOKIG00005018269) ENSOKIG00005018255 zbtb1 (ENSOKIG00005018245) ENSOKIG00005018243 ENSOKIG00005018239 MTHFD1 (ENSOKIG00005013727) ENSOKIG00005029571 CKB (ENSOKIG00005029444) Rainbow trout MODERN SPECIES 25 ENSOMYG00000000379 RHOB (ENSOMYG00000000043) ENSOMYG00000062632 ENSOMYG00000021814 ENSOMYG00000021806 ENSOMYG00000020930 ENSOMYG00000020007 ENSOMYG00000040932 ENSOMYG00000019884 #31 ENSOMYG00000064401 ENSOMYG00000019809 ENSOMYG00000019769 #11 ENSOMYG00000019653 #15 ENSOMYG00000019544 #18 ENSOMYG00000019419 #21 ENSOMYG00000019359 ##22 ENSOMYG00000019353 xkr5a (ENSOMYG00000019346) ENSOMYG00000019196 ENSOMYG00000019154 mycn (ENSOMYG00000019114) smek1 (ENSOMYG00000018278) erh (ENSOMYG00000018223) paplnb (ENSOMYG00000018193) zbtb1 (ENSOMYG00000018187) ENSOMYG00000018183 MTHFD1 (ENSOMYG00000017946) CKB (ENSOMYG00000017756) ENSOMYG00000017740 ENSOMYG00000016375 ENSOMYG00000058917 Huchen MODERN SPECIES 949 lin28b (ENSHHUG00000014720) #18 prep (ENSHHUG00000014755) #21 ENSHHUG00000014813 ##22 xkr5a (ENSHHUG00000014829) tram2 (ENSHHUG00000014840) ENSHHUG00000014889 mycn (ENSHHUG00000014931) Northern pike MODERN SPECIES 13 hpcal1 (ENSELUG00000001044) pdia6 (ENSELUG00000015457) kcnf1a (ENSELUG00000015479) ENSELUG00000015491 ENSELUG00000028194 ROCK2 (ENSELUG00000015548) sobpb (ENSELUG00000000581) #31 ENSELUG00000015653 ##25 ENSELUG00000015689 #24 mrap2b (ENSELUG00000015703) ENSELUG00000015710 SIM1 (ENSELUG00000015779) #11 GRIK2 (ENSELUG00000015845) #15 lin28b (ENSELUG00000001315) #18 prep (ENSELUG00000015898) #21 ENSELUG00000015908 ##22 xkr5a (ENSELUG00000015946) tram2 (ENSELUG00000016084) efhc1 (ENSELUG00000016112) ENSELUG00000016172 mrpl19 (ENSELUG00000016189) ENSELUG00000016209 mycn (ENSELUG00000016225) smek1 (ENSELUG00000001107) erh (ENSELUG00000016332) paplnb (ENSELUG00000016353) ENSELUG00000016373 PLEKHG3 (ENSELUG00000016456) spint1b (ENSELUG00000016488) ppp1r14d (ENSELUG00000016498) ENSELUG00000016511