Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000161472 #7 ENSGT01100000264921 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Primates ANCESTRAL SPECIES 2 ENSGT00940000161472 #7 ENSGT01100000264921 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Haplorrhini ANCESTRAL SPECIES 12 ENSGT00940000161472 #7 ENSGT01100000264921 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Simiiformes ANCESTRAL SPECIES 2 ENSGT00940000161472 #7 ENSGT01100000264921 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT01100000264921 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a #17 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Macaca ANCESTRAL SPECIES 1 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a #17 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a #17 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT00940000153052.c.b.a.a.a.a.a.b #24 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 ENSGT00390000017443.s.a.a Rhesus MODERN SPECIES 17 TTC9 (ENSMMUG00000056365) #7 ENSMMUG00000051671 #8 MAP3K9 (ENSMMUG00000005786) #9 PCNX1 (ENSMMUG00000019470) #10 SIPA1L1 (ENSMMUG00000020067) #11 RGS6 (ENSMMUG00000001820) #12 DPF3 (ENSMMUG00000016351) #13 ENSMMUG00000063538 #14 DCAF4 (ENSMMUG00000003625) #15 ZFYVE1 (ENSMMUG00000005140) #16 ENSMMUG00000056507 #17 RBM25 (ENSMMUG00000002332) #18 PSEN1 (ENSMMUG00000010173) #19 PAPLN (ENSMMUG00000020195) #20 NUMB (ENSMMUG00000020196) #21 RIOX1 (ENSMMUG00000000315) #22 ENSMMUG00000053481 #23 ENSMMUG00000049894 #24 ENSMMUG00000006855 #25 DNAL1 (ENSMMUG00000004910) #26 PNMA1 (ENSMMUG00000004911) #27 MIDEAS (ENSMMUG00000004913) #28 PTGR2 (ENSMMUG00000018146) #29 ZNF410 (ENSMMUG00000011144) #30 FAM161B (ENSMMUG00000029273) #31 COQ6 (ENSMMUG00000011148) #32 BBOF1 (ENSMMUG00000012683) #33 ALDH6A1 (ENSMMUG00000012684) #34 LIN52 (ENSMMUG00000052506) #35 VSX2 (ENSMMUG00000029272) #36 ABCD4 (ENSMMUG00000004041) #37 Pig-tailed macaque MODERN SPECIES 214 TTC9 (ENSMNEG00000031012) #7 MAP3K9 (ENSMNEG00000037894) #9 PCNX1 (ENSMNEG00000017837) #10 ENSMNEG00000033356 SIPA1L1 (ENSMNEG00000039216) #11 ENSMNEG00000033671 RGS6 (ENSMNEG00000030946) #12 ENSMNEG00000034035 #14 DPF3 (ENSMNEG00000030722) #13 DCAF4 (ENSMNEG00000036053) #15 ZFYVE1 (ENSMNEG00000029231) #16 RBM25 (ENSMNEG00000032922) #18 PSEN1 (ENSMNEG00000037289) #19 PAPLN (ENSMNEG00000027160) #20 NUMB (ENSMNEG00000034179) #21 RIOX1 (ENSMNEG00000021421) #22 HEATR4 (ENSMNEG00000032384) ENSMNEG00000033296 ##25 ACOT4 (ENSMNEG00000028485) ##25 ENSMNEG00000005067 #25 DNAL1 (ENSMNEG00000034870) #26 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00950000183779 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a #17 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00390000000083.a #22 Sooty mangabey MODERN SPECIES 303 MAP3K9 (ENSCATG00000030062) #9 PCNX1 (ENSCATG00000021420) #10 SIPA1L1 (ENSCATG00000036653) #11 ENSCATG00000029544 RGS6 (ENSCATG00000040492) #12 DPF3 (ENSCATG00000009867) #13 DCAF4 (ENSCATG00000020304) #15 ENSCATG00000032385 ZFYVE1 (ENSCATG00000037612) #16 ENSCATG00000042248 #17 RBM25 (ENSCATG00000039651) #18 PSEN1 (ENSCATG00000038778) #19 PAPLN (ENSCATG00000042093) #20 NUMB (ENSCATG00000041867) #21 HEATR4 (ENSCATG00000044114) RIOX1 (ENSCATG00000021107) #22 ENSCATG00000029897 ##25 ENSCATG00000036501 Rhinopithecus ANCESTRAL SPECIES 229 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00940000153385.b.a.b.oc ENSGT00390000013207 ENSGT00390000000083.a #22 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.b.b ##24 ENSGT01010000222336.a.a.a.ob.a.a.o ##25 Black snub-nosed monkey MODERN SPECIES 713 PCNX1 (ENSRBIG00000027567) #10 ENSRBIG00000033864 SIPA1L1 (ENSRBIG00000013622) #11 RGS6 (ENSRBIG00000038422) #12 DPF3 (ENSRBIG00000021314) #13 ENSRBIG00000038609 #14 ENSRBIG00000040543 DCAF4 (ENSRBIG00000041818) #15 ZFYVE1 (ENSRBIG00000036107) #16 RBM25 (ENSRBIG00000039904) #18 PSEN1 (ENSRBIG00000019293) #19 PAPLN (ENSRBIG00000033248) #20 NUMB (ENSRBIG00000043156) #21 ENSRBIG00000015372 HEATR4 (ENSRBIG00000041847) RIOX1 (ENSRBIG00000017859) #22 ENSRBIG00000031681 ##24 ENSRBIG00000023969 ##25 Golden snub-nosed monkey MODERN SPECIES 797 RGS6 (ENSRROG00000040751) #12 DPF3 (ENSRROG00000039384) #13 ENSRROG00000045287 #14 ENSRROG00000044529 DCAF4 (ENSRROG00000035960) #15 ZFYVE1 (ENSRROG00000037742) #16 ENSRROG00000028901 ##24 RBM25 (ENSRROG00000035556) #18 PSEN1 (ENSRROG00000023023) #19 PAPLN (ENSRROG00000032324) #20 NUMB (ENSRROG00000039499) #21 ENSRROG00000035725 HEATR4 (ENSRROG00000040469) RIOX1 (ENSRROG00000010218) #22 ENSRROG00000039724 ##24 ENSRROG00000036776 ##25 Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00900000143785 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Hominidae ANCESTRAL SPECIES 14 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00900000143785 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000011943.b ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.i ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00900000143785 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000011943.b ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.i ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00900000143785 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Pan ANCESTRAL SPECIES 8 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000011943.b ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a.i ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00900000143785 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00550000076451.a.b.a ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Bonobo MODERN SPECIES 5 ADAM20 (ENSPPAG00000015111) MED6 (ENSPPAG00000042102) TTC9 (ENSPPAG00000035446) #7 MAP3K9 (ENSPPAG00000027733) #9 PCNX1 (ENSPPAG00000038593) #10 SIPA1L1 (ENSPPAG00000000429) #11 ENSPPAG00000022724 #12 DPF3 (ENSPPAG00000037348) #13 DCAF4 (ENSPPAG00000029989) #15 ZFYVE1 (ENSPPAG00000043760) #16 RBM25 (ENSPPAG00000039402) #18 PSEN1 (ENSPPAG00000038712) #19 PAPLN (ENSPPAG00000042474) #20 NUMB (ENSPPAG00000022878) #21 HEATR4 (ENSPPAG00000018626) RIOX1 (ENSPPAG00000021453) #22 ACOT2 (ENSPPAG00000003795) ##25 ACOT4 (ENSPPAG00000037580) ##25 ENSPPAG00000012443 #25 DNAL1 (ENSPPAG00000038940) #26 PNMA1 (ENSPPAG00000016978) #27 MIDEAS (ENSPPAG00000043022) #28 ENSPPAG00000010721 PTGR2 (ENSPPAG00000043789) #29 ZNF410 (ENSPPAG00000038897) #30 FAM161B (ENSPPAG00000036655) #31 COQ6 (ENSPPAG00000037999) #32 ENTPD5 (ENSPPAG00000029076) ENSPPAG00000028641 BBOF1 (ENSPPAG00000034088) #33 ALDH6A1 (ENSPPAG00000030111) #34 Human MODERN SPECIES 5 ADAM20 (ENSG00000134007) MED6 (ENSG00000133997) TTC9 (ENSG00000133985) #7 MAP3K9 (ENSG00000006432) #9 PCNX1 (ENSG00000100731) #10 SIPA1L1 (ENSG00000197555) #11 RGS6 (ENSG00000182732) #12 DPF3 (ENSG00000205683) #13 DCAF4 (ENSG00000119599) #15 ZFYVE1 (ENSG00000165861) #16 RBM25 (ENSG00000119707) #18 PSEN1 (ENSG00000080815) #19 PAPLN (ENSG00000100767) #20 NUMB (ENSG00000133961) #21 HEATR4 (ENSG00000187105) RIOX1 (ENSG00000170468) #22 ACOT1 (ENSG00000184227) ##25 ACOT2 (ENSG00000119673) ##25 ACOT4 (ENSG00000177465) ##25 ACOT6 (ENSG00000205669) #25 DNAL1 (ENSG00000119661) #26 PNMA1 (ENSG00000176903) #27 MIDEAS (ENSG00000156030) #28 PTGR2 (ENSG00000140043) #29 ZNF410 (ENSG00000119725) #30 FAM161B (ENSG00000156050) #31 COQ6 (ENSG00000119723) #32 ENTPD5 (ENSG00000187097) BBOF1 (ENSG00000119636) #33 ALDH6A1 (ENSG00000119711) #34 LIN52 (ENSG00000205659) #35 Orangutan MODERN SPECIES 5 MED6 (ENSPPYG00000005954) TTC9 (ENSPPYG00000030644) #7 MAP3K9 (ENSPPYG00000005956) #9 PCNX1 (ENSPPYG00000005957) #10 SIPA1L1 (ENSPPYG00000005960) #11 ENSPPYG00000030046 RGS6 (ENSPPYG00000005962) #12 ENSPPYG00000005963 #13 DCAF4 (ENSPPYG00000005965) #15 ZFYVE1 (ENSPPYG00000005966) #16 RBM25 (ENSPPYG00000037322) #18 PSEN1 (ENSPPYG00000005967) #19 PAPLN (ENSPPYG00000005968) #20 NUMB (ENSPPYG00000041351) #21 HEATR4 (ENSPPYG00000005970) RIOX1 (ENSPPYG00000032048) #22 ENSPPYG00000033025 ##25 ENSPPYG00000005971 ##25 ACOT4 (ENSPPYG00000029617) ##25 ENSPPYG00000029646 #25 DNAL1 (ENSPPYG00000005973) #26 PNMA1 (ENSPPYG00000005974) #27 MIDEAS (ENSPPYG00000005975) #28 PTGR2 (ENSPPYG00000005976) #29 ZNF410 (ENSPPYG00000037257) #30 FAM161B (ENSPPYG00000038071) #31 ENSPPYG00000005978 #32 ENTPD5 (ENSPPYG00000030358) BBOF1 (ENSPPYG00000005979) #33 ALDH6A1 (ENSPPYG00000005980) #34 LIN52 (ENSPPYG00000032254) #35 Gibbon MODERN SPECIES 10 PCNX1 (ENSNLEG00000001896) #10 ENSNLEG00000036319 SIPA1L1 (ENSNLEG00000002117) #11 ENSNLEG00000002297 #12 ENSNLEG00000002403 #13 ENSNLEG00000035680 #14 ENSNLEG00000035129 ENSNLEG00000028662 DCAF4 (ENSNLEG00000002449) #15 ZFYVE1 (ENSNLEG00000002632) #16 RBM25 (ENSNLEG00000002701) #18 PSEN1 (ENSNLEG00000002855) #19 PAPLN (ENSNLEG00000002925) #20 NUMB (ENSNLEG00000002944) #21 HEATR4 (ENSNLEG00000003060) RIOX1 (ENSNLEG00000003130) #22 ENSNLEG00000027838 ##25 DTD2 (ENSNLEG00000034317) NUBPL (ENSNLEG00000003141) ENSNLEG00000028683 ENSNLEG00000003168 AKAP6 (ENSNLEG00000003187) ENSNLEG00000032055 ENSNLEG00000032145 EGLN3 (ENSNLEG00000003247) SPTSSA (ENSNLEG00000029839) EAPP (ENSNLEG00000034702) SNX6 (ENSNLEG00000003310) CFL2 (ENSNLEG00000003417) BAZ1A (ENSNLEG00000003440) SRP54 (ENSNLEG00000003496) Platyrrhini ANCESTRAL SPECIES 4 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000155162.c.b ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Cebidae ANCESTRAL SPECIES 3 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000155162.c.b ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Marmoset MODERN SPECIES 1 ENSCJAG00000080004 SIPA1L1 (ENSCJAG00000014597) #11 ENSCJAG00000085303 ENSCJAG00000070816 ENSCJAG00000073976 RGS6 (ENSCJAG00000014537) #12 DPF3 (ENSCJAG00000014522) #13 ENSCJAG00000014514 #15 ZFYVE1 (ENSCJAG00000014498) #16 ENSCJAG00000077374 ENSCJAG00000014441 #18 PSEN1 (ENSCJAG00000014387) #19 PAPLN (ENSCJAG00000014352) #20 NUMB (ENSCJAG00000014264) #21 ENSCJAG00000082842 RIOX1 (ENSCJAG00000042587) #22 ENSCJAG00000009908 ACOT4 (ENSCJAG00000009911) ##25 ENSCJAG00000037095 #25 DNAL1 (ENSCJAG00000009922) #26 PNMA1 (ENSCJAG00000042056) #27 MIDEAS (ENSCJAG00000009935) #28 PTGR2 (ENSCJAG00000011505) #29 ENSCJAG00000085540 ZNF410 (ENSCJAG00000020308) #30 FAM161B (ENSCJAG00000020363) #31 COQ6 (ENSCJAG00000065534) #32 ENTPD5 (ENSCJAG00000020391) BBOF1 (ENSCJAG00000020404) #33 ALDH6A1 (ENSCJAG00000020412) #34 LIN52 (ENSCJAG00000047702) #35 Cebidae_a ANCESTRAL SPECIES 4 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000155162.c.b ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00910000147388 ENSGT00390000009546.a #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Bolivian squirrel monkey MODERN SPECIES 52 ENSSBOG00000027808 PCNX1 (ENSSBOG00000021906) #10 ENSSBOG00000034324 SIPA1L1 (ENSSBOG00000025880) #11 ENSSBOG00000027922 ENSSBOG00000007314 RGS6 (ENSSBOG00000029364) #12 DPF3 (ENSSBOG00000034660) #13 DCAF4 (ENSSBOG00000033529) #15 ZFYVE1 (ENSSBOG00000024876) #16 RBM25 (ENSSBOG00000034153) #18 PSEN1 (ENSSBOG00000023450) #19 PAPLN (ENSSBOG00000025394) #20 NUMB (ENSSBOG00000033352) #21 HEATR4 (ENSSBOG00000018986) RIOX1 (ENSSBOG00000013673) #22 ENSSBOG00000034097 ##25 ACOT4 (ENSSBOG00000011298) ##25 ENSSBOG00000021771 #25 ENSSBOG00000022744 ENSSBOG00000025995 #26 MIDEAS (ENSSBOG00000029806) #28 PTGR2 (ENSSBOG00000026681) #29 ZNF410 (ENSSBOG00000032182) #30 ENSSBOG00000034409 #31 COQ6 (ENSSBOG00000028801) #32 ENTPD5 (ENSSBOG00000026410) BBOF1 (ENSSBOG00000032274) #33 ALDH6A1 (ENSSBOG00000023484) #34 LIN52 (ENSSBOG00000034707) #35 ENSSBOG00000022778 Capuchin MODERN SPECIES 54 ENSCCAG00000037545 PCNX1 (ENSCCAG00000029639) #10 SNRPC (ENSCCAG00000036059) SIPA1L1 (ENSCCAG00000030332) #11 ENSCCAG00000017345 RGS6 (ENSCCAG00000029956) #12 ENSCCAG00000021283 DPF3 (ENSCCAG00000034749) #13 DCAF4 (ENSCCAG00000033783) #15 ZFYVE1 (ENSCCAG00000031934) #16 ENSCCAG00000009724 RBM25 (ENSCCAG00000030446) #18 PSEN1 (ENSCCAG00000036998) #19 PAPLN (ENSCCAG00000032497) #20 NUMB (ENSCCAG00000029310) #21 RIOX1 (ENSCCAG00000019473) #22 HEATR4 (ENSCCAG00000024834) ENSCCAG00000026985 ##25 ACOT4 (ENSCCAG00000026334) ##25 ENSCCAG00000028536 ACOT6 (ENSCCAG00000030425) #25 DNAL1 (ENSCCAG00000024968) #26 PNMA1 (ENSCCAG00000015385) #27 MIDEAS (ENSCCAG00000037089) #28 PTGR2 (ENSCCAG00000033557) #29 ZNF410 (ENSCCAG00000030057) #30 FAM161B (ENSCCAG00000032037) #31 COQ6 (ENSCCAG00000032550) #32 ENTPD5 (ENSCCAG00000027798) BBOF1 (ENSCCAG00000025685) #33 ALDH6A1 (ENSCCAG00000033515) #34 Mas night monkey MODERN SPECIES 825 SIPA1L1 (ENSANAG00000038424) #11 RGS6 (ENSANAG00000032870) #12 ENSANAG00000035122 DPF3 (ENSANAG00000024095) #13 DCAF4 (ENSANAG00000033863) #15 ZFYVE1 (ENSANAG00000019269) #16 ENSANAG00000021022 ENSANAG00000020515 ENSANAG00000020412 RBM25 (ENSANAG00000028295) #18 ENSANAG00000005418 ENSANAG00000036030 PSEN1 (ENSANAG00000026358) #19 PAPLN (ENSANAG00000021965) #20 NUMB (ENSANAG00000031899) #21 RIOX1 (ENSANAG00000018079) #22 HEATR4 (ENSANAG00000026083) ENSANAG00000025037 ##25 ACOT4 (ENSANAG00000020773) ##25 ACOT6 (ENSANAG00000011051) #25 DNAL1 (ENSANAG00000030053) #26 PNMA1 (ENSANAG00000019370) #27 MIDEAS (ENSANAG00000029623) #28 PTGR2 (ENSANAG00000037046) #29 ZNF410 (ENSANAG00000030872) #30 FAM161B (ENSANAG00000032869) #31 COQ6 (ENSANAG00000031639) #32 ENTPD5 (ENSANAG00000024903) BBOF1 (ENSANAG00000023794) #33 ALDH6A1 (ENSANAG00000027801) #34 LIN52 (ENSANAG00000022775) #35 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000161067 ENSGT00390000017666.j ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Lemuriformes ANCESTRAL SPECIES 28 ENSGT00940000161067 ENSGT00390000017666.j ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Lemuriformes_a ANCESTRAL SPECIES 11 ENSGT00940000161067 ENSGT00390000017666.j ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00860000135749 #14 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Greater bamboo lemur MODERN SPECIES 802 SIPA1L1 (ENSPSMG00000014702) #11 RGS6 (ENSPSMG00000015304) #12 DPF3 (ENSPSMG00000015731) #13 ENSPSMG00000015744 #14 ENSPSMG00000015813 #15 ZFYVE1 (ENSPSMG00000015851) #16 ENSPSMG00000015868 ENSPSMG00000015962 #18 PSEN1 (ENSPSMG00000016104) #19 PAPLN (ENSPSMG00000016270) #20 NUMB (ENSPSMG00000016550) #21 RIOX1 (ENSPSMG00000016647) #22 ENSPSMG00000016650 ACOT4 (ENSPSMG00000016672) ##25 ENSPSMG00000016682 #25 ENSPSMG00000016693 #26 SOX3 (ENSPSMG00000016701) Bushbaby MODERN SPECIES 135 RIOX1 (ENSOGAG00000027192) #22 ACOT4 (ENSOGAG00000032824) ##25 ACOT6 (ENSOGAG00000003958) #25 DNAL1 (ENSOGAG00000032854) #26 PNMA1 (ENSOGAG00000004052) #27 MIDEAS (ENSOGAG00000004053) #28 PTGR2 (ENSOGAG00000014524) #29 ZNF410 (ENSOGAG00000025936) #30 FAM161B (ENSOGAG00000006404) #31 COQ6 (ENSOGAG00000006406) #32 ENTPD5 (ENSOGAG00000006408) ALDH6A1 (ENSOGAG00000003006) #34 LIN52 (ENSOGAG00000003009) #35 VSX2 (ENSOGAG00000013552) #36 ABCD4 (ENSOGAG00000013557) #37 VRTN (ENSOGAG00000024981) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Glires ANCESTRAL SPECIES 12 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Rodentia_B ANCESTRAL SPECIES 7 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Myomorpha ANCESTRAL SPECIES 7 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Muroidea ANCESTRAL SPECIES 16 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00390000016292.g.a.b Muroidea_A ANCESTRAL SPECIES 15 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Cricetidae ANCESTRAL SPECIES 17 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00900000143211 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 Golden Hamster MODERN SPECIES 652 Map3k9 (ENSMAUG00000020034) #9 Pcnx (ENSMAUG00000015734) #10 ENSMAUG00000005000 #11 ENSMAUG00000008287 #11 Rgs6 (ENSMAUG00000021028) #12 ENSMAUG00000003690 Dpf3 (ENSMAUG00000022055) #13 Dcaf4 (ENSMAUG00000016053) #15 Zfyve1 (ENSMAUG00000001400) #16 ENSMAUG00000017751 #18 ENSMAUG00000015673 Psen1 (ENSMAUG00000004090) #19 Papln (ENSMAUG00000015070) #20 Numb (ENSMAUG00000017202) #21 ENSMAUG00000021947 Riox1 (ENSMAUG00000019549) #22 Heatr4 (ENSMAUG00000015300) ENSMAUG00000007215 ##25 Chinese hamster chok1gshd MODERN SPECIES 2 Sipa1l1 (ENSCGRG00001001236) #11 ENSCGRG00001011338 Rgs6 (ENSCGRG00001021356) #12 Dpf3 (ENSCGRG00001011525) #13 Dcaf4 (ENSCGRG00001000557) #15 Zfyve1 (ENSCGRG00001024058) #16 ENSCGRG00001023149 Rbm25 (ENSCGRG00001020817) #18 Psen1 (ENSCGRG00001006926) #19 Papln (ENSCGRG00001003202) #20 ENSCGRG00001000963 Numb (ENSCGRG00001016054) #21 ENSCGRG00001014450 ENSCGRG00001010571 ENSCGRG00001011878 Riox1 (ENSCGRG00001010518) #22 Heatr4 (ENSCGRG00001008018) ENSCGRG00001005504 ##25 ENSCGRG00001000843 ##25 Acot4 (ENSCGRG00001007771) ##25 ENSCGRG00001011559 ##25 ENSCGRG00001023275 ##25 ENSCGRG00001020145 ##25 Acot6 (ENSCGRG00001019681) #25 Dnal1 (ENSCGRG00001016988) #26 Pnma1 (ENSCGRG00001010465) #27 Mideas (ENSCGRG00001021773) #28 Ptgr2 (ENSCGRG00001015947) #29 Zfp410 (ENSCGRG00001014072) #30 Fam161b (ENSCGRG00001024553) #31 Coq6 (ENSCGRG00001024043) #32 Cricetidae_B ANCESTRAL SPECIES 18 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 Prairie vole MODERN SPECIES Ttc9 (ENSMOCG00000018568) #7 Map3k9 (ENSMOCG00000008905) #9 Pcnx (ENSMOCG00000016626) #10 ENSMOCG00000022199 Sipa1l1 (ENSMOCG00000020326) #11 Rgs6 (ENSMOCG00000005512) #12 Dpf3 (ENSMOCG00000003784) #13 Dcaf4 (ENSMOCG00000015020) #15 Zfyve1 (ENSMOCG00000022979) #16 Rbm25 (ENSMOCG00000001935) #18 ENSMOCG00000005921 Psen1 (ENSMOCG00000009775) #19 ENSMOCG00000005015 Papln (ENSMOCG00000001461) #20 Numb (ENSMOCG00000022280) #21 Riox1 (ENSMOCG00000007570) #22 Heatr4 (ENSMOCG00000015139) ENSMOCG00000005730 ##25 ENSMOCG00000021013 ENSMOCG00000005600 ##25 Acot4 (ENSMOCG00000013343) ##25 ENSMOCG00000018416 ##25 Acot5 (ENSMOCG00000000977) ##25 Acot6 (ENSMOCG00000004025) #25 Dnal1 (ENSMOCG00000022267) #26 Pnma1 (ENSMOCG00000006996) #27 Mideas (ENSMOCG00000019740) #28 Ptgr2 (ENSMOCG00000010724) #29 Zfp410 (ENSMOCG00000017363) #30 Fam161b (ENSMOCG00000001828) #31 Coq6 (ENSMOCG00000006495) #32 Northern American deer mouse MODERN SPECIES 5 ENSPEMG00000001343 Adam21 (ENSPEMG00000000549) Med6 (ENSPEMG00000000191) Ttc9 (ENSPEMG00000028070) #7 Map3k9 (ENSPEMG00000018982) #9 Pcnx (ENSPEMG00000018423) #10 Sipa1l1 (ENSPEMG00000015088) #11 Rgs6 (ENSPEMG00000005178) #12 Dpf3 (ENSPEMG00000014009) #13 Dcaf4 (ENSPEMG00000009925) #15 Zfyve1 (ENSPEMG00000008691) #16 Rbm25 (ENSPEMG00000008001) #18 Psen1 (ENSPEMG00000006667) #19 Papln (ENSPEMG00000000670) #20 Numb (ENSPEMG00000018950) #21 Riox1 (ENSPEMG00000018431) #22 Heatr4 (ENSPEMG00000010857) ENSPEMG00000011640 ##25 ENSPEMG00000007692 ##25 Acot4 (ENSPEMG00000024969) ##25 ENSPEMG00000009464 ##25 ENSPEMG00000007003 ##25 Acot6 (ENSPEMG00000020726) #25 ENSPEMG00000027213 ENSPEMG00000030670 #26 ENSPEMG00000025553 Pnma1 (ENSPEMG00000001767) #27 Mideas (ENSPEMG00000020623) #28 Ptgr2 (ENSPEMG00000020776) #29 Zfp410 (ENSPEMG00000022416) #30 Fam161b (ENSPEMG00000021215) #31 Murinae ANCESTRAL SPECIES 8 ENSGT00830000128402 ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Mus ANCESTRAL SPECIES 10 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d ##25 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000156726.f ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d ##25 ENSGT00390000000083.a #22 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000156726.f ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d ##25 ENSGT00390000000083.a #22 ENSGT00900000143211 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b Mouse MODERN SPECIES 3 Synj2bp (ENSMUSG00000090935) Adam21 (ENSMUSG00000008438) Med6 (ENSMUSG00000002679) Ttc9 (ENSMUSG00000042734) #7 Map3k9 (ENSMUSG00000042724) #9 Pcnx (ENSMUSG00000021140) #10 Sipa1l1 (ENSMUSG00000042700) #11 Rgs6 (ENSMUSG00000021219) #12 Dpf3 (ENSMUSG00000021221) #13 Dcaf4 (ENSMUSG00000021222) #15 Zfyve1 (ENSMUSG00000042628) #16 Rbm25 (ENSMUSG00000010608) #18 Psen1 (ENSMUSG00000019969) #19 Papln (ENSMUSG00000021223) #20 Numb (ENSMUSG00000021224) #21 Riox1 (ENSMUSG00000046791) #22 Heatr4 (ENSMUSG00000090843) Acot2 (ENSMUSG00000021226) ##25 Acot1 (ENSMUSG00000072949) ##25 Acot4 (ENSMUSG00000052392) ##25 Gm49366 (ENSMUSG00000113475) Acot3 (ENSMUSG00000021228) ##25 Acot5 (ENSMUSG00000042540) ##25 Acot6 (ENSMUSG00000043487) #25 Dnal1 (ENSMUSG00000042523) #26 Pnma1 (ENSMUSG00000054383) #27 Mideas (ENSMUSG00000042507) #28 Ptgr2 (ENSMUSG00000072946) #29 Zfp410 (ENSMUSG00000042472) #30 Fam161b (ENSMUSG00000021234) #31 Coq6 (ENSMUSG00000021235) #32 Mus_C ANCESTRAL SPECIES 11 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000156726.f ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d ##25 ENSGT00390000000083.a #22 ENSGT00900000143211 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c ##25 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.a.c.a.b ##25 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b spretus MODERN SPECIES 3 Adam21 (MGP_SPRETEiJ_G0018755) Med6 (MGP_SPRETEiJ_G0018756) Ttc9 (MGP_SPRETEiJ_G0018757) #7 Map3k9 (MGP_SPRETEiJ_G0018758) #9 Pcnx (MGP_SPRETEiJ_G0018759) #10 Sipa1l1 (MGP_SPRETEiJ_G0018760) #11 MGP_SPRETEiJ_G0018761 Rgs6 (MGP_SPRETEiJ_G0018762) #12 Dpf3 (MGP_SPRETEiJ_G0018763) #13 Dcaf4 (MGP_SPRETEiJ_G0018764) #15 Zfyve1 (MGP_SPRETEiJ_G0018765) #16 MGP_SPRETEiJ_G0018766 #18 Psen1 (MGP_SPRETEiJ_G0018767) #19 Papln (MGP_SPRETEiJ_G0018768) #20 Numb (MGP_SPRETEiJ_G0018769) #21 Riox1 (MGP_SPRETEiJ_G0018770) #22 MGP_SPRETEiJ_G0018771 Heatr4 (MGP_SPRETEiJ_G0018772) MGP_SPRETEiJ_G0018773 ##25 MGP_SPRETEiJ_G0018774 ##25 MGP_SPRETEiJ_G0018775 ##25 Acot3 (MGP_SPRETEiJ_G0018776) ##25 Acot5 (MGP_SPRETEiJ_G0018777) ##25 MGP_SPRETEiJ_G0018778 ##25 Dnal1 (MGP_SPRETEiJ_G0018779) #26 Pnma1 (MGP_SPRETEiJ_G0018780) #27 Mideas (MGP_SPRETEiJ_G0018781) #28 Ptgr2 (MGP_SPRETEiJ_G0018782) #29 Zfp410 (MGP_SPRETEiJ_G0018783) #30 Fam161b (MGP_SPRETEiJ_G0018784) #31 Coq6 (MGP_SPRETEiJ_G0018785) #32 Steppe mouse MODERN SPECIES 3303 Map3k9 (ENSMSIG00000026137) #9 Pcnx (ENSMSIG00000026173) #10 Sipa1l1 (ENSMSIG00000000195) #11 ENSMSIG00000000341 ENSMSIG00000000376 Rgs6 (ENSMSIG00000000514) #12 Dpf3 (ENSMSIG00000001852) #13 Dcaf4 (ENSMSIG00000001923) #15 Zfyve1 (ENSMSIG00000001995) #16 ENSMSIG00000002025 Rbm25 (ENSMSIG00000002048) #18 Psen1 (ENSMSIG00000002158) #19 Papln (ENSMSIG00000002234) #20 ENSMSIG00000002517 #21 Heatr4 (ENSMSIG00000002642) Riox1 (ENSMSIG00000002696) #22 Acot1 (ENSMSIG00000002711) ##25 Acot3 (ENSMSIG00000002760) ##25 ENSMSIG00000002815 ENSMSIG00000002825 Acot5 (ENSMSIG00000002856) ##25 Acot6 (ENSMSIG00000002911) #25 Dnal1 (ENSMSIG00000002943) #26 Pnma1 (ENSMSIG00000003016) #27 Mideas (ENSMSIG00000003037) #28 Ptgr2 (ENSMSIG00000003090) #29 Zfp410 (ENSMSIG00000003181) #30 ENSMSIG00000003267 #31 Coq6 (ENSMSIG00000003335) #32 Entpd5 (ENSMSIG00000003494) Bbof1 (ENSMSIG00000003750) #33 Ryukyu mouse MODERN SPECIES 3 Adam21 (MGP_CAROLIEiJ_G0017910) Med6 (MGP_CAROLIEiJ_G0017911) Ttc9 (MGP_CAROLIEiJ_G0017912) #7 Map3k9 (MGP_CAROLIEiJ_G0017913) #9 Pcnx (MGP_CAROLIEiJ_G0017914) #10 Sipa1l1 (MGP_CAROLIEiJ_G0017915) #11 MGP_CAROLIEiJ_G0017916 Rgs6 (MGP_CAROLIEiJ_G0017917) #12 Dpf3 (MGP_CAROLIEiJ_G0017918) #13 Dcaf4 (MGP_CAROLIEiJ_G0017919) #15 Zfyve1 (MGP_CAROLIEiJ_G0017920) #16 Rbm25 (MGP_CAROLIEiJ_G0017921) #18 Psen1 (MGP_CAROLIEiJ_G0017922) #19 Papln (MGP_CAROLIEiJ_G0017923) #20 Numb (MGP_CAROLIEiJ_G0017924) #21 Riox1 (MGP_CAROLIEiJ_G0017925) #22 MGP_CAROLIEiJ_G0017926 Heatr4 (MGP_CAROLIEiJ_G0017927) Acot4 (MGP_CAROLIEiJ_G0017928) ##25 MGP_CAROLIEiJ_G0017929 ##25 MGP_CAROLIEiJ_G0017930 ##25 Acot3 (MGP_CAROLIEiJ_G0017931) ##25 Acot5 (MGP_CAROLIEiJ_G0017932) ##25 Acot6 (MGP_CAROLIEiJ_G0017933) #25 Dnal1 (MGP_CAROLIEiJ_G0017934) #26 Pnma1 (MGP_CAROLIEiJ_G0017935) #27 Mideas (MGP_CAROLIEiJ_G0017936) #28 Ptgr2 (MGP_CAROLIEiJ_G0017937) #29 Zfp410 (MGP_CAROLIEiJ_G0017938) #30 Fam161b (MGP_CAROLIEiJ_G0017939) #31 Coq6 (MGP_CAROLIEiJ_G0017940) #32 Shrew mouse MODERN SPECIES 20 Synj2bp (MGP_PahariEiJ_G0029666) Adam21 (MGP_PahariEiJ_G0029667) Med6 (MGP_PahariEiJ_G0029668) Ttc9 (MGP_PahariEiJ_G0029669) #7 Map3k9 (MGP_PahariEiJ_G0029670) #9 Pcnx (MGP_PahariEiJ_G0029671) #10 Sipa1l1 (MGP_PahariEiJ_G0029672) #11 Rgs6 (MGP_PahariEiJ_G0029673) #12 Dpf3 (MGP_PahariEiJ_G0029674) #13 Dcaf4 (MGP_PahariEiJ_G0029675) #15 Zfyve1 (MGP_PahariEiJ_G0029676) #16 Rbm25 (MGP_PahariEiJ_G0029677) #18 Psen1 (MGP_PahariEiJ_G0029678) #19 Papln (MGP_PahariEiJ_G0029679) #20 Numb (MGP_PahariEiJ_G0029680) #21 Riox1 (MGP_PahariEiJ_G0029681) #22 MGP_PahariEiJ_G0029682 Heatr4 (MGP_PahariEiJ_G0029683) Or8b47 (MGP_PahariEiJ_G0029684) MGP_PahariEiJ_G0029685 MGP_PahariEiJ_G0029686 MGP_PahariEiJ_G0029687 ##25 MGP_PahariEiJ_G0029688 ##25 Acot4 (MGP_PahariEiJ_G0029689) ##25 MGP_PahariEiJ_G0029690 ##25 Acot5 (MGP_PahariEiJ_G0029691) ##25 Acot6 (MGP_PahariEiJ_G0029692) #25 Dnal1 (MGP_PahariEiJ_G0029693) #26 Pnma1 (MGP_PahariEiJ_G0029694) #27 Mideas (MGP_PahariEiJ_G0029695) #28 Ptgr2 (MGP_PahariEiJ_G0029696) #29 Rat MODERN SPECIES 16 LOC103690152 (ENSRNOG00000047682) Med6 (ENSRNOG00000006976) Ttc9 (ENSRNOG00000007254) #7 Map3k9 (ENSRNOG00000007271) #9 Pcnx1 (ENSRNOG00000007459) #10 Sipa1l1 (ENSRNOG00000007646) #11 Rgs6 (ENSRNOG00000008082) #12 Dpf3 (ENSRNOG00000008086) #13 Dcaf4 (ENSRNOG00000008399) #15 Zfyve1 (ENSRNOG00000008614) #16 Rbm25 (ENSRNOG00000002874) #18 Psen1 (ENSRNOG00000009110) #19 Papln (ENSRNOG00000009448) #20 Numb (ENSRNOG00000009653) #21 Heatr4 (ENSRNOG00000038183) Riox1 (ENSRNOG00000010126) #22 Acot2 (ENSRNOG00000010134) ##25 Acot1 (ENSRNOG00000055221) ##25 Acot4 (ENSRNOG00000046864) ##25 Acot3 (ENSRNOG00000027960) ##25 ENSRNOG00000067599 Acot5 (ENSRNOG00000032508) ##25 Acot3 (ENSRNOG00000053460) ##25 Acot6 (ENSRNOG00000029637) #25 Dnal1 (ENSRNOG00000042333) #26 Pnma1 (ENSRNOG00000010553) #27 Mideas (ENSRNOG00000010653) #28 Ptgr2 (ENSRNOG00000038166) #29 Zfp410 (ENSRNOG00000010985) #30 Fam161b (ENSRNOG00000011112) #31 Coq6 (ENSRNOG00000011164) #32 Upper Galilee mountains blind mole rat MODERN SPECIES 1502 Rgs6 (ENSNGAG00000015965) #12 Dpf3 (ENSNGAG00000018079) #13 Dcaf4 (ENSNGAG00000012972) #15 Zfyve1 (ENSNGAG00000009405) #16 ENSNGAG00000019959 Rbm25 (ENSNGAG00000018465) #18 Psen1 (ENSNGAG00000017181) #19 Papln (ENSNGAG00000019406) #20 ENSNGAG00000012297 #21 Riox1 (ENSNGAG00000003031) #22 ENSNGAG00000001266 ##25 ENSNGAG00000001269 ##25 Acot4 (ENSNGAG00000010998) ##25 ENSNGAG00000016652 ##25 Acot6 (ENSNGAG00000015805) #25 Dnal1 (ENSNGAG00000010152) #26 Pnma1 (ENSNGAG00000015203) #27 Mideas (ENSNGAG00000008541) #28 ENSNGAG00000000298 Ptgr2 (ENSNGAG00000016685) #29 Zfp410 (ENSNGAG00000000633) #30 Fam161b (ENSNGAG00000016812) #31 Coq6 (ENSNGAG00000015962) #32 Entpd5 (ENSNGAG00000011773) Bbof1 (ENSNGAG00000013123) #33 Lesser Egyptian jerboa MODERN SPECIES 41 Tnfrsf21 (ENSJJAG00000021218) Cdc42bpb (ENSJJAG00000021480) ENSJJAG00000018259 Exoc3l4 (ENSJJAG00000011125) Tnfaip2 (ENSJJAG00000010132) Sipa1l1 (ENSJJAG00000023961) #11 Rgs6 (ENSJJAG00000022127) #12 Dpf3 (ENSJJAG00000014377) #13 Dcaf4 (ENSJJAG00000021188) #15 ENSJJAG00000018792 #16 ENSJJAG00000024002 ENSJJAG00000022825 Psen1 (ENSJJAG00000002135) #19 Papln (ENSJJAG00000000927) #20 Numb (ENSJJAG00000019014) #21 Riox1 (ENSJJAG00000019037) #22 Heatr4 (ENSJJAG00000018627) ENSJJAG00000014618 ##25 ENSJJAG00000011596 Dnal1 (ENSJJAG00000017347) #26 Pnma1 (ENSJJAG00000002278) #27 Mideas (ENSJJAG00000012181) #28 Ptgr2 (ENSJJAG00000004075) #29 Zfp410 (ENSJJAG00000011182) #30 Fam161b (ENSJJAG00000010436) #31 Coq6 (ENSJJAG00000013225) #32 Entpd5 (ENSJJAG00000012303) Bbof1 (ENSJJAG00000012977) #33 Aldh6a1 (ENSJJAG00000005519) #34 ENSJJAG00000015460 #35 Vsx2 (ENSJJAG00000011877) #36 Kangaroo rat MODERN SPECIES 321 Synj2bp (ENSDORG00000010450) Med6 (ENSDORG00000014901) Ttc9 (ENSDORG00000027151) #7 Map3k9 (ENSDORG00000011084) #9 Pcnx (ENSDORG00000015586) #10 Sipa1l1 (ENSDORG00000014657) #11 ENSDORG00000023931 Rgs6 (ENSDORG00000015367) #12 Dpf3 (ENSDORG00000007820) #13 Dcaf4 (ENSDORG00000002888) #15 Zfyve1 (ENSDORG00000015230) #16 Rbm25 (ENSDORG00000013247) #18 Psen1 (ENSDORG00000001780) #19 Papln (ENSDORG00000007325) #20 Numb (ENSDORG00000007326) #21 Riox1 (ENSDORG00000028870) #22 Heatr4 (ENSDORG00000005873) ENSDORG00000013571 ##25 ENSDORG00000005537 ##25 ENSDORG00000013097 ##25 ENSDORG00000000064 #25 Dnal1 (ENSDORG00000015187) #26 ENSDORG00000025611 ##27 Mideas (ENSDORG00000015681) #28 Ptgr2 (ENSDORG00000024075) #29 Zfp410 (ENSDORG00000009293) #30 Fam161b (ENSDORG00000009295) #31 Coq6 (ENSDORG00000009297) #32 ENSDORG00000001878 Rnf113a2 (ENSDORG00000027624) ENSDORG00000005218 #33 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.b #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00390000016292.g.a.b ENSGT00940000156110 #34 Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.b #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402.f #35 Marmotini ANCESTRAL SPECIES 27 ENSGT00940000162712 ENSGT00940000161067 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.b #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.m ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b.n ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Alpin marmot MODERN SPECIES 1 ENSMMMG00000015068 ADAM21 (ENSMMMG00000015081) ADAM20 (ENSMMMG00000015097) MED6 (ENSMMMG00000015151) MAP3K9 (ENSMMMG00000015173) #9 PCNX1 (ENSMMMG00000015257) #10 SIPA1L1 (ENSMMMG00000015319) #11 RGS6 (ENSMMMG00000015497) #12 DPF3 (ENSMMMG00000015579) #13 ENSMMMG00000015602 #15 ZFYVE1 (ENSMMMG00000015623) #16 RBM25 (ENSMMMG00000015650) #18 PSEN1 (ENSMMMG00000015676) #19 PAPLN (ENSMMMG00000015699) #20 NUMB (ENSMMMG00000015813) #21 RIOX1 (ENSMMMG00000015975) #22 ENSMMMG00000015982 ##25 ENSMMMG00000015989 ##25 ENSMMMG00000015998 ##25 ENSMMMG00000016020 #25 DNAL1 (ENSMMMG00000016024) #26 PNMA1 (ENSMMMG00000016038) #27 MIDEAS (ENSMMMG00000016040) #28 PTGR2 (ENSMMMG00000016067) #29 ENSMMMG00000016079 ZNF410 (ENSMMMG00000016081) #30 FAM161B (ENSMMMG00000016102) #31 COQ6 (ENSMMMG00000016120) #32 ENTPD5 (ENSMMMG00000016134) BBOF1 (ENSMMMG00000016213) #33 ALDH6A1 (ENSMMMG00000016229) #34 Marmotini_b ANCESTRAL SPECIES 31 ENSGT00940000161933.jb ENSGT00940000162712 ENSGT00390000017666 ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.b #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.m ##25 ENSGT01010000222336.a.a.a.ob.a.a.c.b.n ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 Squirrel MODERN SPECIES 88 ENSSTOG00000022855 ADAM21 (ENSSTOG00000028832) MED6 (ENSSTOG00000014084) MAP3K9 (ENSSTOG00000014094) #9 PCNX1 (ENSSTOG00000013614) #10 ENSSTOG00000030589 SIPA1L1 (ENSSTOG00000010105) #11 RGS6 (ENSSTOG00000013412) #12 DPF3 (ENSSTOG00000011091) #13 ENSSTOG00000020210 #15 ZFYVE1 (ENSSTOG00000011109) #16 RBM25 (ENSSTOG00000011117) #18 PSEN1 (ENSSTOG00000003845) #19 PAPLN (ENSSTOG00000003857) #20 ENSSTOG00000003900 #21 RIOX1 (ENSSTOG00000024278) #22 HEATR4 (ENSSTOG00000007745) ENSSTOG00000032187 ##25 ENSSTOG00000003345 ##25 ACOT4 (ENSSTOG00000003338) ##25 ACOT6 (ENSSTOG00000003091) #25 DNAL1 (ENSSTOG00000000420) #26 ENSSTOG00000029464 PNMA1 (ENSSTOG00000000422) #27 MIDEAS (ENSSTOG00000000423) #28 PTGR2 (ENSSTOG00000008590) #29 ZNF410 (ENSSTOG00000024235) #30 FAM161B (ENSSTOG00000029202) #31 COQ6 (ENSSTOG00000016439) #32 ENTPD5 (ENSSTOG00000008069) ENSSTOG00000008087 #33 Arctic ground squirrel MODERN SPECIES 8 MED6 (ENSUPAG00010016393) TTC9 (ENSUPAG00010016377) #7 MAP3K9 (ENSUPAG00010016024) #9 PCNX1 (ENSUPAG00010015898) #10 SIPA1L1 (ENSUPAG00010015844) #11 RGS6 (ENSUPAG00010015605) #12 DPF3 (ENSUPAG00010015555) #13 ENSUPAG00010015527 #15 ZFYVE1 (ENSUPAG00010015501) #16 RBM25 (ENSUPAG00010015461) #18 PSEN1 (ENSUPAG00010015426) #19 PAPLN (ENSUPAG00010015337) #20 NUMB (ENSUPAG00010015200) #21 RIOX1 (ENSUPAG00010015192) #22 ENSUPAG00010015167 ENSUPAG00010015131 ##25 ACOT4 (ENSUPAG00010015117) ##25 ACOT6 (ENSUPAG00010015106) #25 DNAL1 (ENSUPAG00010015067) #26 PNMA1 (ENSUPAG00010015061) #27 MIDEAS (ENSUPAG00010014994) #28 ENSUPAG00010014987 PTGR2 (ENSUPAG00010014963) #29 ZNF410 (ENSUPAG00010014867) #30 FAM161B (ENSUPAG00010014838) #31 COQ6 (ENSUPAG00010014809) #32 ENTPD5 (ENSUPAG00010014644) BBOF1 (ENSUPAG00010014608) #33 ALDH6A1 (ENSUPAG00010014582) #34 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005010644 TTC9 (ENSSVLG00005010601) #7 MAP3K9 (ENSSVLG00005010363) #9 PCNX1 (ENSSVLG00005009899) #10 ENSSVLG00005009795 SIPA1L1 (ENSSVLG00005009679) #11 ENSSVLG00005009607 RGS6 (ENSSVLG00005008662) #12 DPF3 (ENSSVLG00005008293) #13 ENSSVLG00005008049 #15 ZFYVE1 (ENSSVLG00005007958) #16 RBM25 (ENSSVLG00005007885) #18 PSEN1 (ENSSVLG00005007728) #19 PAPLN (ENSSVLG00005007348) #20 NUMB (ENSSVLG00005007168) #21 RIOX1 (ENSSVLG00005007089) #22 ENSSVLG00005007042 ENSSVLG00005007000 ##25 ENSSVLG00005006975 ENSSVLG00005006698 ##25 ENSSVLG00005006583 ACOT4 (ENSSVLG00005006548) ##25 ENSSVLG00005006522 #25 DNAL1 (ENSSVLG00005006438) #26 PNMA1 (ENSSVLG00005006415) #27 MIDEAS (ENSSVLG00005006379) #28 PTGR2 (ENSSVLG00005006327) #29 ZNF410 (ENSSVLG00005006231) #30 FAM161B (ENSSVLG00005006140) #31 COQ6 (ENSSVLG00005006026) #32 ENTPD5 (ENSSVLG00005005845) Hystricomorpha ANCESTRAL SPECIES 33 ENSGT00940000162712 ENSGT00940000161933 ENSGT00390000017666.p ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.a #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00390000016292.g.a.b ENSGT00940000156110 #34 Naked mole-rat female MODERN SPECIES 18 ENSHGLG00000036909 RGS6 (ENSHGLG00000012031) #12 ENSHGLG00000048633 DPF3 (ENSHGLG00000006635) #13 ENSHGLG00000042994 #15 ENSHGLG00000047889 ZFYVE1 (ENSHGLG00000015923) #16 ENSHGLG00000035871 ENSHGLG00000014745 #18 PSEN1 (ENSHGLG00000044979) #19 PAPLN (ENSHGLG00000013495) #20 ENSHGLG00000017752 #21 ENSHGLG00000039431 ENSHGLG00000039363 ENSHGLG00000049066 RIOX1 (ENSHGLG00000034391) #22 ENSHGLG00000047596 ##25 ENSHGLG00000048609 ACOT6 (ENSHGLG00000040633) #25 ENSHGLG00000013635 DNAL1 (ENSHGLG00000013059) #26 PNMA1 (ENSHGLG00000050390) #27 MIDEAS (ENSHGLG00000012075) #28 PTGR2 (ENSHGLG00000009670) #29 ZNF410 (ENSHGLG00000008562) #30 FAM161B (ENSHGLG00000007604) #31 COQ6 (ENSHGLG00000006532) #32 ENTPD5 (ENSHGLG00000044767) ENSHGLG00000045022 ALDH6A1 (ENSHGLG00000008121) #34 LIN52 (ENSHGLG00000045214) #35 Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00830000128402 ENSGT00940000161933 ENSGT00390000017666.p ENSGT00940000161472 #7 ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.a #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT01030000234522.C.b.e.b.a.a.a #27 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00390000016292.g.a.b ENSGT00940000156110 #34 Guinea pig MODERN SPECIES 20 ENSCPOG00000026757 MED6 (ENSCPOG00000012529) TTC9 (ENSCPOG00000001801) #7 MAP3K9 (ENSCPOG00000001803) #9 PCNX1 (ENSCPOG00000001806) #10 ENSCPOG00000033708 SIPA1L1 (ENSCPOG00000013071) #11 RGS6 (ENSCPOG00000007309) #12 DPF3 (ENSCPOG00000007322) #13 ENSCPOG00000013878 #15 ZFYVE1 (ENSCPOG00000013880) #16 RBM25 (ENSCPOG00000002479) #18 PSEN1 (ENSCPOG00000035027) #19 PAPLN (ENSCPOG00000019279) #20 NUMB (ENSCPOG00000034984) #21 RIOX1 (ENSCPOG00000024797) #22 ENSCPOG00000038505 ##25 HEATR4 (ENSCPOG00000001833) ACOT4 (ENSCPOG00000036993) ##25 ACOT6 (ENSCPOG00000032534) #25 DNAL1 (ENSCPOG00000010655) #26 PNMA1 (ENSCPOG00000010657) #27 MIDEAS (ENSCPOG00000010659) #28 PTGR2 (ENSCPOG00000027073) #29 ZNF410 (ENSCPOG00000009601) #30 FAM161B (ENSCPOG00000040022) #31 COQ6 (ENSCPOG00000009610) #32 ENTPD5 (ENSCPOG00000009621) ENSCPOG00000015588 #33 RNF113A (ENSCPOG00000038517) ALDH6A1 (ENSCPOG00000000015) #34 Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT00390000011854 ENSGT00530000064222.b ENSGT00940000161472 #7 ENSGT00390000017666.p ENSGT00940000158243 #9 ENSGT00940000157417 #10 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005.a #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b ##25 ENSGT01010000222336.a.a.a.ob.a.b ##25 ENSGT01010000222336.a.a.a.ob.b #25 ENSGT00390000016904 #26 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 ENSGT00940000157776 #36 Long-tailed chinchilla MODERN SPECIES 230 ENSCLAG00000006511 MAP3K9 (ENSCLAG00000006444) #9 PCNX1 (ENSCLAG00000006042) #10 SIPA1L1 (ENSCLAG00000005617) #11 RGS6 (ENSCLAG00000004860) #12 DPF3 (ENSCLAG00000004345) #13 ENSCLAG00000004165 #15 ZFYVE1 (ENSCLAG00000004097) #16 RBM25 (ENSCLAG00000003977) #18 PSEN1 (ENSCLAG00000005284) #19 PAPLN (ENSCLAG00000004775) #20 ENSCLAG00000004464 #21 ENSCLAG00000004315 RIOX1 (ENSCLAG00000004260) #22 HEATR4 (ENSCLAG00000004180) ENSCLAG00000004124 ##25 ACOT4 (ENSCLAG00000004063) ##25 ENSCLAG00000004019 ##25 ENSCLAG00000003947 #25 DNAL1 (ENSCLAG00000003917) #26 MIDEAS (ENSCLAG00000003802) #28 PTGR2 (ENSCLAG00000003701) #29 ZNF410 (ENSCLAG00000003640) #30 FAM161B (ENSCLAG00000003575) #31 COQ6 (ENSCLAG00000003521) #32 ENTPD5 (ENSCLAG00000003418) ENSCLAG00000003357 #33 ALDH6A1 (ENSCLAG00000003304) #34 LIN52 (ENSCLAG00000003236) #35 Degu MODERN SPECIES 48 ENSODEG00000014741 ENSODEG00000014683 TTC9 (ENSODEG00000015092) #7 ENSODEG00000020259 MAP3K9 (ENSODEG00000015307) #9 PCNX1 (ENSODEG00000015239) #10 SIPA1L1 (ENSODEG00000014862) #11 RGS6 (ENSODEG00000017055) #12 DPF3 (ENSODEG00000015669) #13 ZFYVE1 (ENSODEG00000015740) #16 ENSODEG00000015250 ENSODEG00000016847 PSEN1 (ENSODEG00000016888) #19 PAPLN (ENSODEG00000016332) #20 ENSODEG00000015906 #21 RIOX1 (ENSODEG00000015583) #22 HEATR4 (ENSODEG00000015841) ACOT4 (ENSODEG00000015555) ##25 ENSODEG00000015224 ##25 ACOT6 (ENSODEG00000015420) #25 MIDEAS (ENSODEG00000015501) #28 ENSODEG00000020268 ENSODEG00000014976 #29 ENSODEG00000015245 ENSODEG00000015333 #30 FAM161B (ENSODEG00000014840) #31 COQ6 (ENSODEG00000016014) #32 ENTPD5 (ENSODEG00000015910) ENSODEG00000015055 #33 ALDH6A1 (ENSODEG00000015807) #34 ENSODEG00000015046 #35 Lagomorpha ANCESTRAL SPECIES 25 ENSGT00940000155944 #11 ENSGT00940000157159 #12 ENSGT00940000159153 #13 ENSGT00390000009546 #15 ENSGT00390000016097 #16 ENSGT00730000111019 #18 ENSGT00940000158751 #19 ENSGT00940000156891 #20 ENSGT00940000156005 #21 ENSGT00390000000083.a #22 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a ##25 ENSGT00390000016904 #26 ENSGT00940000157459 #28 ENSGT00940000156793 #29 ENSGT00940000158098 #30 ENSGT00940000159998 #31 ENSGT00390000015152 #32 ENSGT01100000263540.A.b ENSGT00940000154427.A #33 ENSGT00940000156110 #34 ENSGT00390000008402 #35 ENSGT00940000157776 #36 ENSGT00950000182955.a.a.b #37 ENSGT00390000007874 Rabbit MODERN SPECIES 12 ENSOCUG00000012114 RGS6 (ENSOCUG00000000341) #12 ENSOCUG00000031853 DPF3 (ENSOCUG00000016740) #13 ENSOCUG00000009405 #15 ZFYVE1 (ENSOCUG00000008398) #16 RBM25 (ENSOCUG00000013737) #18 PSEN1 (ENSOCUG00000014545) #19 PAPLN (ENSOCUG00000010681) #20 NUMB (ENSOCUG00000010702) #21 ENSOCUG00000031673 RIOX1 (ENSOCUG00000021858) #22 HEATR4 (ENSOCUG00000005994) ENSOCUG00000030890 ENSOCUG00000022543 ##25 ENSOCUG00000029229 #25 DNAL1 (ENSOCUG00000007284) #26 MIDEAS (ENSOCUG00000007290) #28 PTGR2 (ENSOCUG00000006785) #29 ZNF410 (ENSOCUG00000006787) #30 FAM161B (ENSOCUG00000006791) #31 COQ6 (ENSOCUG00000006799) #32 ENSOCUG00000006803 BBOF1 (ENSOCUG00000017487) #33 ALDH6A1 (ENSOCUG00000025121) #34 LIN52 (ENSOCUG00000017491) #35 VSX2 (ENSOCUG00000017496) #36