Glires	ANCESTRAL SPECIES	12	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Myomorpha	ANCESTRAL SPECIES	7	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Muroidea	ANCESTRAL SPECIES	16	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Murinae	ANCESTRAL SPECIES	8	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Mus	ANCESTRAL SPECIES	10	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT00900000143211 #23	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT00900000143211 #23	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
spretus	MODERN SPECIES	3	Adam21 (MGP_SPRETEiJ_G0018755) #7	Med6 (MGP_SPRETEiJ_G0018756) #8	Ttc9 (MGP_SPRETEiJ_G0018757) #9	Map3k9 (MGP_SPRETEiJ_G0018758) #10	Pcnx (MGP_SPRETEiJ_G0018759) #11	Sipa1l1 (MGP_SPRETEiJ_G0018760) #12	MGP_SPRETEiJ_G0018761 #13	Rgs6 (MGP_SPRETEiJ_G0018762) #14	Dpf3 (MGP_SPRETEiJ_G0018763) #15	Dcaf4 (MGP_SPRETEiJ_G0018764) #16	Zfyve1 (MGP_SPRETEiJ_G0018765) #17	MGP_SPRETEiJ_G0018766 #18	Psen1 (MGP_SPRETEiJ_G0018767) #19	Papln (MGP_SPRETEiJ_G0018768) #20	Numb (MGP_SPRETEiJ_G0018769) #21	Riox1 (MGP_SPRETEiJ_G0018770) #22	MGP_SPRETEiJ_G0018771 #23	Heatr4 (MGP_SPRETEiJ_G0018772) #24	MGP_SPRETEiJ_G0018773 #25	MGP_SPRETEiJ_G0018774 #26	MGP_SPRETEiJ_G0018775 #27	Acot3 (MGP_SPRETEiJ_G0018776) #28	Acot5 (MGP_SPRETEiJ_G0018777) #29	MGP_SPRETEiJ_G0018778 #30	Dnal1 (MGP_SPRETEiJ_G0018779) #31	Pnma1 (MGP_SPRETEiJ_G0018780) #32	Mideas (MGP_SPRETEiJ_G0018781) #33	Ptgr2 (MGP_SPRETEiJ_G0018782) #34	Zfp410 (MGP_SPRETEiJ_G0018783) #35	Fam161b (MGP_SPRETEiJ_G0018784) #36	Coq6 (MGP_SPRETEiJ_G0018785) #37
Steppe mouse	MODERN SPECIES	3303	Map3k9 (ENSMSIG00000026137) #10	Pcnx (ENSMSIG00000026173) #11	Sipa1l1 (ENSMSIG00000000195) #12	ENSMSIG00000000341 #13	ENSMSIG00000000376	Rgs6 (ENSMSIG00000000514) #14	Dpf3 (ENSMSIG00000001852) #15	Dcaf4 (ENSMSIG00000001923) #16	Zfyve1 (ENSMSIG00000001995) #17	ENSMSIG00000002025	Rbm25 (ENSMSIG00000002048) #18	Psen1 (ENSMSIG00000002158) #19	Papln (ENSMSIG00000002234) #20	ENSMSIG00000002517 #21	Heatr4 (ENSMSIG00000002642) #24	Riox1 (ENSMSIG00000002696) #22	Acot1 (ENSMSIG00000002711) #26	Acot3 (ENSMSIG00000002760) #28	ENSMSIG00000002815	ENSMSIG00000002825	Acot5 (ENSMSIG00000002856) #29	Acot6 (ENSMSIG00000002911) ##30	Dnal1 (ENSMSIG00000002943) #31	Pnma1 (ENSMSIG00000003016) #32	Mideas (ENSMSIG00000003037) #33	Ptgr2 (ENSMSIG00000003090) #34	Zfp410 (ENSMSIG00000003181) #35	ENSMSIG00000003267 #36	Coq6 (ENSMSIG00000003335) #37	Entpd5 (ENSMSIG00000003494)	Bbof1 (ENSMSIG00000003750)
Mouse	MODERN SPECIES	3	Synj2bp (ENSMUSG00000090935)	Adam21 (ENSMUSG00000008438) #7	Med6 (ENSMUSG00000002679) #8	Ttc9 (ENSMUSG00000042734) #9	Map3k9 (ENSMUSG00000042724) #10	Pcnx (ENSMUSG00000021140) #11	Sipa1l1 (ENSMUSG00000042700) #12	Rgs6 (ENSMUSG00000021219) #14	Dpf3 (ENSMUSG00000021221) #15	Dcaf4 (ENSMUSG00000021222) #16	Zfyve1 (ENSMUSG00000042628) #17	Rbm25 (ENSMUSG00000010608) #18	Psen1 (ENSMUSG00000019969) #19	Papln (ENSMUSG00000021223) #20	Numb (ENSMUSG00000021224) #21	Riox1 (ENSMUSG00000046791) #22	Heatr4 (ENSMUSG00000090843) #24	Acot2 (ENSMUSG00000021226) #25	Acot1 (ENSMUSG00000072949) #26	Acot4 (ENSMUSG00000052392) ##30	Gm49366 (ENSMUSG00000113475)	Acot3 (ENSMUSG00000021228) #28	Acot5 (ENSMUSG00000042540) #29	Acot6 (ENSMUSG00000043487) ##30	Dnal1 (ENSMUSG00000042523) #31	Pnma1 (ENSMUSG00000054383) #32	Mideas (ENSMUSG00000042507) #33	Ptgr2 (ENSMUSG00000072946) #34	Zfp410 (ENSMUSG00000042472) #35	Fam161b (ENSMUSG00000021234) #36	Coq6 (ENSMUSG00000021235) #37
Ryukyu mouse	MODERN SPECIES	3	Adam21 (MGP_CAROLIEiJ_G0017910) #7	Med6 (MGP_CAROLIEiJ_G0017911) #8	Ttc9 (MGP_CAROLIEiJ_G0017912) #9	Map3k9 (MGP_CAROLIEiJ_G0017913) #10	Pcnx (MGP_CAROLIEiJ_G0017914) #11	Sipa1l1 (MGP_CAROLIEiJ_G0017915) #12	MGP_CAROLIEiJ_G0017916 #13	Rgs6 (MGP_CAROLIEiJ_G0017917) #14	Dpf3 (MGP_CAROLIEiJ_G0017918) #15	Dcaf4 (MGP_CAROLIEiJ_G0017919) #16	Zfyve1 (MGP_CAROLIEiJ_G0017920) #17	Rbm25 (MGP_CAROLIEiJ_G0017921) #18	Psen1 (MGP_CAROLIEiJ_G0017922) #19	Papln (MGP_CAROLIEiJ_G0017923) #20	Numb (MGP_CAROLIEiJ_G0017924) #21	Riox1 (MGP_CAROLIEiJ_G0017925) #22	MGP_CAROLIEiJ_G0017926 #23	Heatr4 (MGP_CAROLIEiJ_G0017927) #24	Acot4 (MGP_CAROLIEiJ_G0017928) ##30	MGP_CAROLIEiJ_G0017929 #26	MGP_CAROLIEiJ_G0017930 #26	Acot3 (MGP_CAROLIEiJ_G0017931) #28	Acot5 (MGP_CAROLIEiJ_G0017932) #29	Acot6 (MGP_CAROLIEiJ_G0017933) ##30	Dnal1 (MGP_CAROLIEiJ_G0017934) #31	Pnma1 (MGP_CAROLIEiJ_G0017935) #32	Mideas (MGP_CAROLIEiJ_G0017936) #33	Ptgr2 (MGP_CAROLIEiJ_G0017937) #34	Zfp410 (MGP_CAROLIEiJ_G0017938) #35	Fam161b (MGP_CAROLIEiJ_G0017939) #36	Coq6 (MGP_CAROLIEiJ_G0017940) #37
Shrew mouse	MODERN SPECIES	20	Synj2bp (MGP_PahariEiJ_G0029666)	Adam21 (MGP_PahariEiJ_G0029667) #7	Med6 (MGP_PahariEiJ_G0029668) #8	Ttc9 (MGP_PahariEiJ_G0029669) #9	Map3k9 (MGP_PahariEiJ_G0029670) #10	Pcnx (MGP_PahariEiJ_G0029671) #11	Sipa1l1 (MGP_PahariEiJ_G0029672) #12	Rgs6 (MGP_PahariEiJ_G0029673) #14	Dpf3 (MGP_PahariEiJ_G0029674) #15	Dcaf4 (MGP_PahariEiJ_G0029675) #16	Zfyve1 (MGP_PahariEiJ_G0029676) #17	Rbm25 (MGP_PahariEiJ_G0029677) #18	Psen1 (MGP_PahariEiJ_G0029678) #19	Papln (MGP_PahariEiJ_G0029679) #20	Numb (MGP_PahariEiJ_G0029680) #21	Riox1 (MGP_PahariEiJ_G0029681) #22	MGP_PahariEiJ_G0029682 #23	Heatr4 (MGP_PahariEiJ_G0029683) #24	Or8b47 (MGP_PahariEiJ_G0029684)	MGP_PahariEiJ_G0029685	MGP_PahariEiJ_G0029686	MGP_PahariEiJ_G0029687 #26	MGP_PahariEiJ_G0029688 #26	Acot4 (MGP_PahariEiJ_G0029689) ##30	MGP_PahariEiJ_G0029690 ##30	Acot5 (MGP_PahariEiJ_G0029691) #29	Acot6 (MGP_PahariEiJ_G0029692) ##30	Dnal1 (MGP_PahariEiJ_G0029693) #31	Pnma1 (MGP_PahariEiJ_G0029694) #32	Mideas (MGP_PahariEiJ_G0029695) #33	Ptgr2 (MGP_PahariEiJ_G0029696) #34
Rat	MODERN SPECIES	16	LOC103690152 (ENSRNOG00000047682) #7	Med6 (ENSRNOG00000006976) #8	Ttc9 (ENSRNOG00000007254) #9	Map3k9 (ENSRNOG00000007271) #10	Pcnx1 (ENSRNOG00000007459) #11	Sipa1l1 (ENSRNOG00000007646) #12	Rgs6 (ENSRNOG00000008082) #14	Dpf3 (ENSRNOG00000008086) #15	Dcaf4 (ENSRNOG00000008399) #16	Zfyve1 (ENSRNOG00000008614) #17	Rbm25 (ENSRNOG00000002874) #18	Psen1 (ENSRNOG00000009110) #19	Papln (ENSRNOG00000009448) #20	Numb (ENSRNOG00000009653) #21	Heatr4 (ENSRNOG00000038183) #24	Riox1 (ENSRNOG00000010126) #22	Acot2 (ENSRNOG00000010134) #26	Acot1 (ENSRNOG00000055221) #26	Acot4 (ENSRNOG00000046864) ##30	Acot3 (ENSRNOG00000027960) #28	ENSRNOG00000067599	Acot5 (ENSRNOG00000032508) #29	Acot3 (ENSRNOG00000053460) #29	Acot6 (ENSRNOG00000029637) ##30	Dnal1 (ENSRNOG00000042333) #31	Pnma1 (ENSRNOG00000010553) #32	Mideas (ENSRNOG00000010653) #33	Ptgr2 (ENSRNOG00000038166) #34	Zfp410 (ENSRNOG00000010985) #35	Fam161b (ENSRNOG00000011112) #36	Coq6 (ENSRNOG00000011164) #37
Cricetidae	ANCESTRAL SPECIES	17	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Cricetinae	ANCESTRAL SPECIES	11	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00900000143211 #23	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Golden Hamster	MODERN SPECIES	652	Map3k9 (ENSMAUG00000020034) #10	Pcnx (ENSMAUG00000015734) #11	ENSMAUG00000005000 #12	ENSMAUG00000008287 #12	Rgs6 (ENSMAUG00000021028) #14	ENSMAUG00000003690	Dpf3 (ENSMAUG00000022055) #15	Dcaf4 (ENSMAUG00000016053) #16	Zfyve1 (ENSMAUG00000001400) #17	ENSMAUG00000017751 #18	ENSMAUG00000015673	Psen1 (ENSMAUG00000004090) #19	Papln (ENSMAUG00000015070) #20	Numb (ENSMAUG00000017202) #21	ENSMAUG00000021947 #23	Riox1 (ENSMAUG00000019549) #22	Heatr4 (ENSMAUG00000015300) #24	ENSMAUG00000007215 #26
Chinese hamster chok1gshd	MODERN SPECIES	2	Sipa1l1 (ENSCGRG00001001236) #12	ENSCGRG00001011338	Rgs6 (ENSCGRG00001021356) #14	Dpf3 (ENSCGRG00001011525) #15	Dcaf4 (ENSCGRG00001000557) #16	Zfyve1 (ENSCGRG00001024058) #17	ENSCGRG00001023149	Rbm25 (ENSCGRG00001020817) #18	Psen1 (ENSCGRG00001006926) #19	Papln (ENSCGRG00001003202) #20	ENSCGRG00001000963	Numb (ENSCGRG00001016054) #21	ENSCGRG00001014450	ENSCGRG00001010571	ENSCGRG00001011878 #23	Riox1 (ENSCGRG00001010518) #22	Heatr4 (ENSCGRG00001008018) #24	ENSCGRG00001005504 #26	ENSCGRG00001000843 #26	Acot4 (ENSCGRG00001007771) ##30	ENSCGRG00001011559 #26	ENSCGRG00001023275 #29	ENSCGRG00001020145 #29	Acot6 (ENSCGRG00001019681) ##30	Dnal1 (ENSCGRG00001016988) #31	Pnma1 (ENSCGRG00001010465) #32	Mideas (ENSCGRG00001021773) #33	Ptgr2 (ENSCGRG00001015947) #34	Zfp410 (ENSCGRG00001014072) #35	Fam161b (ENSCGRG00001024553) #36	Coq6 (ENSCGRG00001024043) #37
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Prairie vole	MODERN SPECIES		Ttc9 (ENSMOCG00000018568) #9	Map3k9 (ENSMOCG00000008905) #10	Pcnx (ENSMOCG00000016626) #11	ENSMOCG00000022199	Sipa1l1 (ENSMOCG00000020326) #12	Rgs6 (ENSMOCG00000005512) #14	Dpf3 (ENSMOCG00000003784) #15	Dcaf4 (ENSMOCG00000015020) #16	Zfyve1 (ENSMOCG00000022979) #17	Rbm25 (ENSMOCG00000001935) #18	ENSMOCG00000005921	Psen1 (ENSMOCG00000009775) #19	ENSMOCG00000005015	Papln (ENSMOCG00000001461) #20	Numb (ENSMOCG00000022280) #21	Riox1 (ENSMOCG00000007570) #22	Heatr4 (ENSMOCG00000015139) #24	ENSMOCG00000005730 #26	ENSMOCG00000021013	ENSMOCG00000005600 #26	Acot4 (ENSMOCG00000013343) ##30	ENSMOCG00000018416 #26	Acot5 (ENSMOCG00000000977) #29	Acot6 (ENSMOCG00000004025) ##30	Dnal1 (ENSMOCG00000022267) #31	Pnma1 (ENSMOCG00000006996) #32	Mideas (ENSMOCG00000019740) #33	Ptgr2 (ENSMOCG00000010724) #34	Zfp410 (ENSMOCG00000017363) #35	Fam161b (ENSMOCG00000001828) #36	Coq6 (ENSMOCG00000006495) #37
Northern American deer mouse	MODERN SPECIES	5	ENSPEMG00000001343	Adam21 (ENSPEMG00000000549) #7	Med6 (ENSPEMG00000000191) #8	Ttc9 (ENSPEMG00000028070) #9	Map3k9 (ENSPEMG00000018982) #10	Pcnx (ENSPEMG00000018423) #11	Sipa1l1 (ENSPEMG00000015088) #12	Rgs6 (ENSPEMG00000005178) #14	Dpf3 (ENSPEMG00000014009) #15	Dcaf4 (ENSPEMG00000009925) #16	Zfyve1 (ENSPEMG00000008691) #17	Rbm25 (ENSPEMG00000008001) #18	Psen1 (ENSPEMG00000006667) #19	Papln (ENSPEMG00000000670) #20	Numb (ENSPEMG00000018950) #21	Riox1 (ENSPEMG00000018431) #22	Heatr4 (ENSPEMG00000010857) #24	ENSPEMG00000011640 #26	ENSPEMG00000007692 #26	Acot4 (ENSPEMG00000024969) ##30	ENSPEMG00000009464 #26	ENSPEMG00000007003 #29	Acot6 (ENSPEMG00000020726) ##30	ENSPEMG00000027213	ENSPEMG00000030670 #31	ENSPEMG00000025553	Pnma1 (ENSPEMG00000001767) #32	Mideas (ENSPEMG00000020623) #33	Ptgr2 (ENSPEMG00000020776) #34	Zfp410 (ENSPEMG00000022416) #35	Fam161b (ENSPEMG00000021215) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1502							Rgs6 (ENSNGAG00000015965) #14	Dpf3 (ENSNGAG00000018079) #15	Dcaf4 (ENSNGAG00000012972) #16	Zfyve1 (ENSNGAG00000009405) #17	ENSNGAG00000019959	Rbm25 (ENSNGAG00000018465) #18	Psen1 (ENSNGAG00000017181) #19	Papln (ENSNGAG00000019406) #20	ENSNGAG00000012297 #21	Riox1 (ENSNGAG00000003031) #22	ENSNGAG00000001266 #26	ENSNGAG00000001269 #26	Acot4 (ENSNGAG00000010998) ##30	ENSNGAG00000016652 #29	Acot6 (ENSNGAG00000015805) ##30	Dnal1 (ENSNGAG00000010152) #31	Pnma1 (ENSNGAG00000015203) #32	Mideas (ENSNGAG00000008541) #33	ENSNGAG00000000298	Ptgr2 (ENSNGAG00000016685) #34	Zfp410 (ENSNGAG00000000633) #35	Fam161b (ENSNGAG00000016812) #36	Coq6 (ENSNGAG00000015962) #37	Entpd5 (ENSNGAG00000011773)	Bbof1 (ENSNGAG00000013123)
Lesser Egyptian jerboa	MODERN SPECIES	41	Tnfrsf21 (ENSJJAG00000021218)	Cdc42bpb (ENSJJAG00000021480)	ENSJJAG00000018259	Exoc3l4 (ENSJJAG00000011125)	Tnfaip2 (ENSJJAG00000010132)	Sipa1l1 (ENSJJAG00000023961) #12	Rgs6 (ENSJJAG00000022127) #14	Dpf3 (ENSJJAG00000014377) #15	Dcaf4 (ENSJJAG00000021188) #16	ENSJJAG00000018792 #17	ENSJJAG00000024002	ENSJJAG00000022825	Psen1 (ENSJJAG00000002135) #19	Papln (ENSJJAG00000000927) #20	Numb (ENSJJAG00000019014) #21	Riox1 (ENSJJAG00000019037) #22	Heatr4 (ENSJJAG00000018627) #24	ENSJJAG00000014618 ##30	ENSJJAG00000011596	Dnal1 (ENSJJAG00000017347) #31	Pnma1 (ENSJJAG00000002278) #32	Mideas (ENSJJAG00000012181) #33	Ptgr2 (ENSJJAG00000004075) #34	Zfp410 (ENSJJAG00000011182) #35	Fam161b (ENSJJAG00000010436) #36	Coq6 (ENSJJAG00000013225) #37	Entpd5 (ENSJJAG00000012303)	Bbof1 (ENSJJAG00000012977)	Aldh6a1 (ENSJJAG00000005519)	ENSJJAG00000015460	Vsx2 (ENSJJAG00000011877)
Kangaroo rat	MODERN SPECIES	321	Synj2bp (ENSDORG00000010450)	Med6 (ENSDORG00000014901) #8	Ttc9 (ENSDORG00000027151) #9	Map3k9 (ENSDORG00000011084) #10	Pcnx (ENSDORG00000015586) #11	Sipa1l1 (ENSDORG00000014657) #12	ENSDORG00000023931	Rgs6 (ENSDORG00000015367) #14	Dpf3 (ENSDORG00000007820) #15	Dcaf4 (ENSDORG00000002888) #16	Zfyve1 (ENSDORG00000015230) #17	Rbm25 (ENSDORG00000013247) #18	Psen1 (ENSDORG00000001780) #19	Papln (ENSDORG00000007325) #20	Numb (ENSDORG00000007326) #21	Riox1 (ENSDORG00000028870) #22	Heatr4 (ENSDORG00000005873) #24	ENSDORG00000013571 #26	ENSDORG00000005537 #29	ENSDORG00000013097 #29	ENSDORG00000000064 ##30	Dnal1 (ENSDORG00000015187) #31	ENSDORG00000025611 ##32	Mideas (ENSDORG00000015681) #33	Ptgr2 (ENSDORG00000024075) #34	Zfp410 (ENSDORG00000009293) #35	Fam161b (ENSDORG00000009295) #36	Coq6 (ENSDORG00000009297) #37	ENSDORG00000001878	Rnf113a2 (ENSDORG00000027624)	ENSDORG00000005218
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Sciuridae	ANCESTRAL SPECIES	8	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402.f
Marmotini	ANCESTRAL SPECIES	27	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #26	ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Alpin marmot	MODERN SPECIES	1	ENSMMMG00000015068	ADAM21 (ENSMMMG00000015081) #7	ADAM20 (ENSMMMG00000015097)	MED6 (ENSMMMG00000015151) #8	MAP3K9 (ENSMMMG00000015173) #10	PCNX1 (ENSMMMG00000015257) #11	SIPA1L1 (ENSMMMG00000015319) #12	RGS6 (ENSMMMG00000015497) #14	DPF3 (ENSMMMG00000015579) #15	ENSMMMG00000015602 #16	ZFYVE1 (ENSMMMG00000015623) #17	RBM25 (ENSMMMG00000015650) #18	PSEN1 (ENSMMMG00000015676) #19	PAPLN (ENSMMMG00000015699) #20	NUMB (ENSMMMG00000015813) #21	RIOX1 (ENSMMMG00000015975) #22	ENSMMMG00000015982 #26	ENSMMMG00000015989 #26	ENSMMMG00000015998 #26	ENSMMMG00000016020 ##30	DNAL1 (ENSMMMG00000016024) #31	PNMA1 (ENSMMMG00000016038) #32	MIDEAS (ENSMMMG00000016040) #33	PTGR2 (ENSMMMG00000016067) #34	ENSMMMG00000016079	ZNF410 (ENSMMMG00000016081) #35	FAM161B (ENSMMMG00000016102) #36	COQ6 (ENSMMMG00000016120) #37	ENTPD5 (ENSMMMG00000016134)	BBOF1 (ENSMMMG00000016213)	ALDH6A1 (ENSMMMG00000016229)
Marmotini_b	ANCESTRAL SPECIES	31	ENSGT00940000161933.jb	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #26	ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Squirrel	MODERN SPECIES	88	ENSSTOG00000022855	ADAM21 (ENSSTOG00000028832) #7	MED6 (ENSSTOG00000014084) #8	MAP3K9 (ENSSTOG00000014094) #10	PCNX1 (ENSSTOG00000013614) #11	ENSSTOG00000030589	SIPA1L1 (ENSSTOG00000010105) #12	RGS6 (ENSSTOG00000013412) #14	DPF3 (ENSSTOG00000011091) #15	ENSSTOG00000020210 #16	ZFYVE1 (ENSSTOG00000011109) #17	RBM25 (ENSSTOG00000011117) #18	PSEN1 (ENSSTOG00000003845) #19	PAPLN (ENSSTOG00000003857) #20	ENSSTOG00000003900 #21	RIOX1 (ENSSTOG00000024278) #22	HEATR4 (ENSSTOG00000007745) #24	ENSSTOG00000032187 #26	ENSSTOG00000003345 #26	ACOT4 (ENSSTOG00000003338) ##30	ACOT6 (ENSSTOG00000003091) ##30	DNAL1 (ENSSTOG00000000420) #31	ENSSTOG00000029464	PNMA1 (ENSSTOG00000000422) #32	MIDEAS (ENSSTOG00000000423) #33	PTGR2 (ENSSTOG00000008590) #34	ZNF410 (ENSSTOG00000024235) #35	FAM161B (ENSSTOG00000029202) #36	COQ6 (ENSSTOG00000016439) #37	ENTPD5 (ENSSTOG00000008069)	ENSSTOG00000008087
Arctic ground squirrel	MODERN SPECIES	8			MED6 (ENSUPAG00010016393) #8	TTC9 (ENSUPAG00010016377) #9	MAP3K9 (ENSUPAG00010016024) #10	PCNX1 (ENSUPAG00010015898) #11	SIPA1L1 (ENSUPAG00010015844) #12	RGS6 (ENSUPAG00010015605) #14	DPF3 (ENSUPAG00010015555) #15	ENSUPAG00010015527 #16	ZFYVE1 (ENSUPAG00010015501) #17	RBM25 (ENSUPAG00010015461) #18	PSEN1 (ENSUPAG00010015426) #19	PAPLN (ENSUPAG00010015337) #20	NUMB (ENSUPAG00010015200) #21	RIOX1 (ENSUPAG00010015192) #22	ENSUPAG00010015167 #24	ENSUPAG00010015131 #26	ACOT4 (ENSUPAG00010015117) ##30	ACOT6 (ENSUPAG00010015106) ##30	DNAL1 (ENSUPAG00010015067) #31	PNMA1 (ENSUPAG00010015061) #32	MIDEAS (ENSUPAG00010014994) #33	ENSUPAG00010014987	PTGR2 (ENSUPAG00010014963) #34	ZNF410 (ENSUPAG00010014867) #35	FAM161B (ENSUPAG00010014838) #36	COQ6 (ENSUPAG00010014809) #37	ENTPD5 (ENSUPAG00010014644)	BBOF1 (ENSUPAG00010014608)	ALDH6A1 (ENSUPAG00010014582)
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005010644 #8	TTC9 (ENSSVLG00005010601) #9	MAP3K9 (ENSSVLG00005010363) #10	PCNX1 (ENSSVLG00005009899) #11	ENSSVLG00005009795	SIPA1L1 (ENSSVLG00005009679) #12	ENSSVLG00005009607	RGS6 (ENSSVLG00005008662) #14	DPF3 (ENSSVLG00005008293) #15	ENSSVLG00005008049 #16	ZFYVE1 (ENSSVLG00005007958) #17	RBM25 (ENSSVLG00005007885) #18	PSEN1 (ENSSVLG00005007728) #19	PAPLN (ENSSVLG00005007348) #20	NUMB (ENSSVLG00005007168) #21	RIOX1 (ENSSVLG00005007089) #22	ENSSVLG00005007042 #24	ENSSVLG00005007000 #26	ENSSVLG00005006975	ENSSVLG00005006698 #26	ENSSVLG00005006583	ACOT4 (ENSSVLG00005006548) ##30	ENSSVLG00005006522 ##30	DNAL1 (ENSSVLG00005006438) #31	PNMA1 (ENSSVLG00005006415) #32	MIDEAS (ENSSVLG00005006379) #33	PTGR2 (ENSSVLG00005006327) #34	ZNF410 (ENSSVLG00005006231) #35	FAM161B (ENSSVLG00005006140) #36	COQ6 (ENSSVLG00005006026) #37	ENTPD5 (ENSSVLG00005005845)
Hystricomorpha	ANCESTRAL SPECIES	33	ENSGT00940000162712 #7	ENSGT00940000161933	ENSGT00390000017666.p #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Naked mole-rat female	MODERN SPECIES	18	ENSHGLG00000036909	RGS6 (ENSHGLG00000012031) #14	ENSHGLG00000048633	DPF3 (ENSHGLG00000006635) #15	ENSHGLG00000042994 #16	ENSHGLG00000047889	ZFYVE1 (ENSHGLG00000015923) #17	ENSHGLG00000035871	ENSHGLG00000014745 #18	PSEN1 (ENSHGLG00000044979) #19	PAPLN (ENSHGLG00000013495) #20	ENSHGLG00000017752 #21	ENSHGLG00000039431	ENSHGLG00000039363	ENSHGLG00000049066 #24	RIOX1 (ENSHGLG00000034391) #22	ENSHGLG00000047596 #30	ENSHGLG00000048609	ACOT6 (ENSHGLG00000040633) ##30	ENSHGLG00000013635	DNAL1 (ENSHGLG00000013059) #31	PNMA1 (ENSHGLG00000050390) #32	MIDEAS (ENSHGLG00000012075) #33	PTGR2 (ENSHGLG00000009670) #34	ZNF410 (ENSHGLG00000008562) #35	FAM161B (ENSHGLG00000007604) #36	COQ6 (ENSHGLG00000006532) #37	ENTPD5 (ENSHGLG00000044767)	ENSHGLG00000045022	ALDH6A1 (ENSHGLG00000008121)	LIN52 (ENSHGLG00000045214)
Hystricomorpha_a	ANCESTRAL SPECIES	27	ENSGT00830000128402	ENSGT00940000161933	ENSGT00390000017666.p #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Guinea pig	MODERN SPECIES	20	ENSCPOG00000026757	MED6 (ENSCPOG00000012529) #8	TTC9 (ENSCPOG00000001801) #9	MAP3K9 (ENSCPOG00000001803) #10	PCNX1 (ENSCPOG00000001806) #11	ENSCPOG00000033708	SIPA1L1 (ENSCPOG00000013071) #12	RGS6 (ENSCPOG00000007309) #14	DPF3 (ENSCPOG00000007322) #15	ENSCPOG00000013878 #16	ZFYVE1 (ENSCPOG00000013880) #17	RBM25 (ENSCPOG00000002479) #18	PSEN1 (ENSCPOG00000035027) #19	PAPLN (ENSCPOG00000019279) #20	NUMB (ENSCPOG00000034984) #21	RIOX1 (ENSCPOG00000024797) #22	ENSCPOG00000038505 #26	HEATR4 (ENSCPOG00000001833) #24	ACOT4 (ENSCPOG00000036993) ##30	ACOT6 (ENSCPOG00000032534) ##30	DNAL1 (ENSCPOG00000010655) #31	PNMA1 (ENSCPOG00000010657) #32	MIDEAS (ENSCPOG00000010659) #33	PTGR2 (ENSCPOG00000027073) #34	ZNF410 (ENSCPOG00000009601) #35	FAM161B (ENSCPOG00000040022) #36	COQ6 (ENSCPOG00000009610) #37	ENTPD5 (ENSCPOG00000009621)	ENSCPOG00000015588	RNF113A (ENSCPOG00000038517)	ALDH6A1 (ENSCPOG00000000015)
Hystricomorpha_b	ANCESTRAL SPECIES	46	ENSGT00390000011854	ENSGT00530000064222.b	ENSGT00940000161472 #9	ENSGT00390000017666.p #8	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776
Long-tailed chinchilla	MODERN SPECIES	230			ENSCLAG00000006511 #8	MAP3K9 (ENSCLAG00000006444) #10	PCNX1 (ENSCLAG00000006042) #11	SIPA1L1 (ENSCLAG00000005617) #12	RGS6 (ENSCLAG00000004860) #14	DPF3 (ENSCLAG00000004345) #15	ENSCLAG00000004165 #16	ZFYVE1 (ENSCLAG00000004097) #17	RBM25 (ENSCLAG00000003977) #18	PSEN1 (ENSCLAG00000005284) #19	PAPLN (ENSCLAG00000004775) #20	ENSCLAG00000004464 #21	ENSCLAG00000004315	RIOX1 (ENSCLAG00000004260) #22	HEATR4 (ENSCLAG00000004180) #24	ENSCLAG00000004124 #26	ACOT4 (ENSCLAG00000004063) ##30	ENSCLAG00000004019 #26	ENSCLAG00000003947 ##30	DNAL1 (ENSCLAG00000003917) #31	MIDEAS (ENSCLAG00000003802) #33	PTGR2 (ENSCLAG00000003701) #34	ZNF410 (ENSCLAG00000003640) #35	FAM161B (ENSCLAG00000003575) #36	COQ6 (ENSCLAG00000003521) #37	ENTPD5 (ENSCLAG00000003418)	ENSCLAG00000003357	ALDH6A1 (ENSCLAG00000003304)	LIN52 (ENSCLAG00000003236)
Degu	MODERN SPECIES	48	ENSODEG00000014741	ENSODEG00000014683 #8	TTC9 (ENSODEG00000015092) #9	ENSODEG00000020259	MAP3K9 (ENSODEG00000015307) #10	PCNX1 (ENSODEG00000015239) #11	SIPA1L1 (ENSODEG00000014862) #12	RGS6 (ENSODEG00000017055) #14	DPF3 (ENSODEG00000015669) #15	ZFYVE1 (ENSODEG00000015740) #17	ENSODEG00000015250	ENSODEG00000016847	PSEN1 (ENSODEG00000016888) #19	PAPLN (ENSODEG00000016332) #20	ENSODEG00000015906 #21	RIOX1 (ENSODEG00000015583) #22	HEATR4 (ENSODEG00000015841) #24	ACOT4 (ENSODEG00000015555) ##30	ENSODEG00000015224 #26	ACOT6 (ENSODEG00000015420) ##30	MIDEAS (ENSODEG00000015501) #33	ENSODEG00000020268	ENSODEG00000014976 #34	ENSODEG00000015245	ENSODEG00000015333 #35	FAM161B (ENSODEG00000014840) #36	COQ6 (ENSODEG00000016014) #37	ENTPD5 (ENSODEG00000015910)	ENSODEG00000015055	ALDH6A1 (ENSODEG00000015807)	ENSODEG00000015046
Lagomorpha	ANCESTRAL SPECIES	25							ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT00390000016904 #31	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776	ENSGT00950000182955.a.a.b	ENSGT00390000007874
Rabbit	MODERN SPECIES	12					ENSOCUG00000012114	RGS6 (ENSOCUG00000000341) #14	ENSOCUG00000031853	DPF3 (ENSOCUG00000016740) #15	ENSOCUG00000009405 #16	ZFYVE1 (ENSOCUG00000008398) #17	RBM25 (ENSOCUG00000013737) #18	PSEN1 (ENSOCUG00000014545) #19	PAPLN (ENSOCUG00000010681) #20	NUMB (ENSOCUG00000010702) #21	ENSOCUG00000031673	RIOX1 (ENSOCUG00000021858) #22	HEATR4 (ENSOCUG00000005994) #24	ENSOCUG00000030890	ENSOCUG00000022543 ##30	ENSOCUG00000029229 ##30	DNAL1 (ENSOCUG00000007284) #31	MIDEAS (ENSOCUG00000007290) #33	PTGR2 (ENSOCUG00000006785) #34	ZNF410 (ENSOCUG00000006787) #35	FAM161B (ENSOCUG00000006791) #36	COQ6 (ENSOCUG00000006799) #37	ENSOCUG00000006803	BBOF1 (ENSOCUG00000017487)	ALDH6A1 (ENSOCUG00000025121)	LIN52 (ENSOCUG00000017491)	VSX2 (ENSOCUG00000017496)