Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000161472 #9	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Glires	ANCESTRAL SPECIES	12	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Myomorpha	ANCESTRAL SPECIES	7	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01050000245403.b	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Muroidea	ANCESTRAL SPECIES	16	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Murinae	ANCESTRAL SPECIES	8	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Mus	ANCESTRAL SPECIES	10	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT00900000143211 #23	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000156726.f #13	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #25	ENSGT00390000000083.a #22	ENSGT00900000143211 #23	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #26	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #28	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
spretus	MODERN SPECIES	3	Adam21 (MGP_SPRETEiJ_G0018755) #7	Med6 (MGP_SPRETEiJ_G0018756) #8	Ttc9 (MGP_SPRETEiJ_G0018757) #9	Map3k9 (MGP_SPRETEiJ_G0018758) #10	Pcnx (MGP_SPRETEiJ_G0018759) #11	Sipa1l1 (MGP_SPRETEiJ_G0018760) #12	MGP_SPRETEiJ_G0018761 #13	Rgs6 (MGP_SPRETEiJ_G0018762) #14	Dpf3 (MGP_SPRETEiJ_G0018763) #15	Dcaf4 (MGP_SPRETEiJ_G0018764) #16	Zfyve1 (MGP_SPRETEiJ_G0018765) #17	MGP_SPRETEiJ_G0018766 #18	Psen1 (MGP_SPRETEiJ_G0018767) #19	Papln (MGP_SPRETEiJ_G0018768) #20	Numb (MGP_SPRETEiJ_G0018769) #21	Riox1 (MGP_SPRETEiJ_G0018770) #22	MGP_SPRETEiJ_G0018771 #23	Heatr4 (MGP_SPRETEiJ_G0018772) #24	MGP_SPRETEiJ_G0018773 #25	MGP_SPRETEiJ_G0018774 #26	MGP_SPRETEiJ_G0018775 #27	Acot3 (MGP_SPRETEiJ_G0018776) #28	Acot5 (MGP_SPRETEiJ_G0018777) #29	MGP_SPRETEiJ_G0018778 #30	Dnal1 (MGP_SPRETEiJ_G0018779) #31	Pnma1 (MGP_SPRETEiJ_G0018780) #32	Mideas (MGP_SPRETEiJ_G0018781) #33	Ptgr2 (MGP_SPRETEiJ_G0018782) #34	Zfp410 (MGP_SPRETEiJ_G0018783) #35	Fam161b (MGP_SPRETEiJ_G0018784) #36	Coq6 (MGP_SPRETEiJ_G0018785) #37
Steppe mouse	MODERN SPECIES	3303	Map3k9 (ENSMSIG00000026137) #10	Pcnx (ENSMSIG00000026173) #11	Sipa1l1 (ENSMSIG00000000195) #12	ENSMSIG00000000341 #13	ENSMSIG00000000376	Rgs6 (ENSMSIG00000000514) #14	Dpf3 (ENSMSIG00000001852) #15	Dcaf4 (ENSMSIG00000001923) #16	Zfyve1 (ENSMSIG00000001995) #17	ENSMSIG00000002025	Rbm25 (ENSMSIG00000002048) #18	Psen1 (ENSMSIG00000002158) #19	Papln (ENSMSIG00000002234) #20	ENSMSIG00000002517 #21	Heatr4 (ENSMSIG00000002642) #24	Riox1 (ENSMSIG00000002696) #22	Acot1 (ENSMSIG00000002711) #26	Acot3 (ENSMSIG00000002760) #28	ENSMSIG00000002815	ENSMSIG00000002825	Acot5 (ENSMSIG00000002856) #29	Acot6 (ENSMSIG00000002911) ##30	Dnal1 (ENSMSIG00000002943) #31	Pnma1 (ENSMSIG00000003016) #32	Mideas (ENSMSIG00000003037) #33	Ptgr2 (ENSMSIG00000003090) #34	Zfp410 (ENSMSIG00000003181) #35	ENSMSIG00000003267 #36	Coq6 (ENSMSIG00000003335) #37	Entpd5 (ENSMSIG00000003494)	Bbof1 (ENSMSIG00000003750)
Mouse	MODERN SPECIES	3	Synj2bp (ENSMUSG00000090935)	Adam21 (ENSMUSG00000008438) #7	Med6 (ENSMUSG00000002679) #8	Ttc9 (ENSMUSG00000042734) #9	Map3k9 (ENSMUSG00000042724) #10	Pcnx (ENSMUSG00000021140) #11	Sipa1l1 (ENSMUSG00000042700) #12	Rgs6 (ENSMUSG00000021219) #14	Dpf3 (ENSMUSG00000021221) #15	Dcaf4 (ENSMUSG00000021222) #16	Zfyve1 (ENSMUSG00000042628) #17	Rbm25 (ENSMUSG00000010608) #18	Psen1 (ENSMUSG00000019969) #19	Papln (ENSMUSG00000021223) #20	Numb (ENSMUSG00000021224) #21	Riox1 (ENSMUSG00000046791) #22	Heatr4 (ENSMUSG00000090843) #24	Acot2 (ENSMUSG00000021226) #25	Acot1 (ENSMUSG00000072949) #26	Acot4 (ENSMUSG00000052392) ##30	Gm49366 (ENSMUSG00000113475)	Acot3 (ENSMUSG00000021228) #28	Acot5 (ENSMUSG00000042540) #29	Acot6 (ENSMUSG00000043487) ##30	Dnal1 (ENSMUSG00000042523) #31	Pnma1 (ENSMUSG00000054383) #32	Mideas (ENSMUSG00000042507) #33	Ptgr2 (ENSMUSG00000072946) #34	Zfp410 (ENSMUSG00000042472) #35	Fam161b (ENSMUSG00000021234) #36	Coq6 (ENSMUSG00000021235) #37
Ryukyu mouse	MODERN SPECIES	3	Adam21 (MGP_CAROLIEiJ_G0017910) #7	Med6 (MGP_CAROLIEiJ_G0017911) #8	Ttc9 (MGP_CAROLIEiJ_G0017912) #9	Map3k9 (MGP_CAROLIEiJ_G0017913) #10	Pcnx (MGP_CAROLIEiJ_G0017914) #11	Sipa1l1 (MGP_CAROLIEiJ_G0017915) #12	MGP_CAROLIEiJ_G0017916 #13	Rgs6 (MGP_CAROLIEiJ_G0017917) #14	Dpf3 (MGP_CAROLIEiJ_G0017918) #15	Dcaf4 (MGP_CAROLIEiJ_G0017919) #16	Zfyve1 (MGP_CAROLIEiJ_G0017920) #17	Rbm25 (MGP_CAROLIEiJ_G0017921) #18	Psen1 (MGP_CAROLIEiJ_G0017922) #19	Papln (MGP_CAROLIEiJ_G0017923) #20	Numb (MGP_CAROLIEiJ_G0017924) #21	Riox1 (MGP_CAROLIEiJ_G0017925) #22	MGP_CAROLIEiJ_G0017926 #23	Heatr4 (MGP_CAROLIEiJ_G0017927) #24	Acot4 (MGP_CAROLIEiJ_G0017928) ##30	MGP_CAROLIEiJ_G0017929 #26	MGP_CAROLIEiJ_G0017930 #26	Acot3 (MGP_CAROLIEiJ_G0017931) #28	Acot5 (MGP_CAROLIEiJ_G0017932) #29	Acot6 (MGP_CAROLIEiJ_G0017933) ##30	Dnal1 (MGP_CAROLIEiJ_G0017934) #31	Pnma1 (MGP_CAROLIEiJ_G0017935) #32	Mideas (MGP_CAROLIEiJ_G0017936) #33	Ptgr2 (MGP_CAROLIEiJ_G0017937) #34	Zfp410 (MGP_CAROLIEiJ_G0017938) #35	Fam161b (MGP_CAROLIEiJ_G0017939) #36	Coq6 (MGP_CAROLIEiJ_G0017940) #37
Shrew mouse	MODERN SPECIES	20	Synj2bp (MGP_PahariEiJ_G0029666)	Adam21 (MGP_PahariEiJ_G0029667) #7	Med6 (MGP_PahariEiJ_G0029668) #8	Ttc9 (MGP_PahariEiJ_G0029669) #9	Map3k9 (MGP_PahariEiJ_G0029670) #10	Pcnx (MGP_PahariEiJ_G0029671) #11	Sipa1l1 (MGP_PahariEiJ_G0029672) #12	Rgs6 (MGP_PahariEiJ_G0029673) #14	Dpf3 (MGP_PahariEiJ_G0029674) #15	Dcaf4 (MGP_PahariEiJ_G0029675) #16	Zfyve1 (MGP_PahariEiJ_G0029676) #17	Rbm25 (MGP_PahariEiJ_G0029677) #18	Psen1 (MGP_PahariEiJ_G0029678) #19	Papln (MGP_PahariEiJ_G0029679) #20	Numb (MGP_PahariEiJ_G0029680) #21	Riox1 (MGP_PahariEiJ_G0029681) #22	MGP_PahariEiJ_G0029682 #23	Heatr4 (MGP_PahariEiJ_G0029683) #24	Or8b47 (MGP_PahariEiJ_G0029684)	MGP_PahariEiJ_G0029685	MGP_PahariEiJ_G0029686	MGP_PahariEiJ_G0029687 #26	MGP_PahariEiJ_G0029688 #26	Acot4 (MGP_PahariEiJ_G0029689) ##30	MGP_PahariEiJ_G0029690 ##30	Acot5 (MGP_PahariEiJ_G0029691) #29	Acot6 (MGP_PahariEiJ_G0029692) ##30	Dnal1 (MGP_PahariEiJ_G0029693) #31	Pnma1 (MGP_PahariEiJ_G0029694) #32	Mideas (MGP_PahariEiJ_G0029695) #33	Ptgr2 (MGP_PahariEiJ_G0029696) #34
Rat	MODERN SPECIES	16	LOC103690152 (ENSRNOG00000047682) #7	Med6 (ENSRNOG00000006976) #8	Ttc9 (ENSRNOG00000007254) #9	Map3k9 (ENSRNOG00000007271) #10	Pcnx1 (ENSRNOG00000007459) #11	Sipa1l1 (ENSRNOG00000007646) #12	Rgs6 (ENSRNOG00000008082) #14	Dpf3 (ENSRNOG00000008086) #15	Dcaf4 (ENSRNOG00000008399) #16	Zfyve1 (ENSRNOG00000008614) #17	Rbm25 (ENSRNOG00000002874) #18	Psen1 (ENSRNOG00000009110) #19	Papln (ENSRNOG00000009448) #20	Numb (ENSRNOG00000009653) #21	Heatr4 (ENSRNOG00000038183) #24	Riox1 (ENSRNOG00000010126) #22	Acot2 (ENSRNOG00000010134) #26	Acot1 (ENSRNOG00000055221) #26	Acot4 (ENSRNOG00000046864) ##30	Acot3 (ENSRNOG00000027960) #28	ENSRNOG00000067599	Acot5 (ENSRNOG00000032508) #29	Acot3 (ENSRNOG00000053460) #29	Acot6 (ENSRNOG00000029637) ##30	Dnal1 (ENSRNOG00000042333) #31	Pnma1 (ENSRNOG00000010553) #32	Mideas (ENSRNOG00000010653) #33	Ptgr2 (ENSRNOG00000038166) #34	Zfp410 (ENSRNOG00000010985) #35	Fam161b (ENSRNOG00000011112) #36	Coq6 (ENSRNOG00000011164) #37
Cricetidae	ANCESTRAL SPECIES	17	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Cricetinae	ANCESTRAL SPECIES	11	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00900000143211 #23	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Golden Hamster	MODERN SPECIES	652	Map3k9 (ENSMAUG00000020034) #10	Pcnx (ENSMAUG00000015734) #11	ENSMAUG00000005000 #12	ENSMAUG00000008287 #12	Rgs6 (ENSMAUG00000021028) #14	ENSMAUG00000003690	Dpf3 (ENSMAUG00000022055) #15	Dcaf4 (ENSMAUG00000016053) #16	Zfyve1 (ENSMAUG00000001400) #17	ENSMAUG00000017751 #18	ENSMAUG00000015673	Psen1 (ENSMAUG00000004090) #19	Papln (ENSMAUG00000015070) #20	Numb (ENSMAUG00000017202) #21	ENSMAUG00000021947 #23	Riox1 (ENSMAUG00000019549) #22	Heatr4 (ENSMAUG00000015300) #24	ENSMAUG00000007215 #26
Chinese hamster chok1gshd	MODERN SPECIES	2	Sipa1l1 (ENSCGRG00001001236) #12	ENSCGRG00001011338	Rgs6 (ENSCGRG00001021356) #14	Dpf3 (ENSCGRG00001011525) #15	Dcaf4 (ENSCGRG00001000557) #16	Zfyve1 (ENSCGRG00001024058) #17	ENSCGRG00001023149	Rbm25 (ENSCGRG00001020817) #18	Psen1 (ENSCGRG00001006926) #19	Papln (ENSCGRG00001003202) #20	ENSCGRG00001000963	Numb (ENSCGRG00001016054) #21	ENSCGRG00001014450	ENSCGRG00001010571	ENSCGRG00001011878 #23	Riox1 (ENSCGRG00001010518) #22	Heatr4 (ENSCGRG00001008018) #24	ENSCGRG00001005504 #26	ENSCGRG00001000843 #26	Acot4 (ENSCGRG00001007771) ##30	ENSCGRG00001011559 #26	ENSCGRG00001023275 #29	ENSCGRG00001020145 #29	Acot6 (ENSCGRG00001019681) ##30	Dnal1 (ENSCGRG00001016988) #31	Pnma1 (ENSCGRG00001010465) #32	Mideas (ENSCGRG00001021773) #33	Ptgr2 (ENSCGRG00001015947) #34	Zfp410 (ENSCGRG00001014072) #35	Fam161b (ENSCGRG00001024553) #36	Coq6 (ENSCGRG00001024043) #37
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00830000128402	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #26	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #29	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Prairie vole	MODERN SPECIES		Ttc9 (ENSMOCG00000018568) #9	Map3k9 (ENSMOCG00000008905) #10	Pcnx (ENSMOCG00000016626) #11	ENSMOCG00000022199	Sipa1l1 (ENSMOCG00000020326) #12	Rgs6 (ENSMOCG00000005512) #14	Dpf3 (ENSMOCG00000003784) #15	Dcaf4 (ENSMOCG00000015020) #16	Zfyve1 (ENSMOCG00000022979) #17	Rbm25 (ENSMOCG00000001935) #18	ENSMOCG00000005921	Psen1 (ENSMOCG00000009775) #19	ENSMOCG00000005015	Papln (ENSMOCG00000001461) #20	Numb (ENSMOCG00000022280) #21	Riox1 (ENSMOCG00000007570) #22	Heatr4 (ENSMOCG00000015139) #24	ENSMOCG00000005730 #26	ENSMOCG00000021013	ENSMOCG00000005600 #26	Acot4 (ENSMOCG00000013343) ##30	ENSMOCG00000018416 #26	Acot5 (ENSMOCG00000000977) #29	Acot6 (ENSMOCG00000004025) ##30	Dnal1 (ENSMOCG00000022267) #31	Pnma1 (ENSMOCG00000006996) #32	Mideas (ENSMOCG00000019740) #33	Ptgr2 (ENSMOCG00000010724) #34	Zfp410 (ENSMOCG00000017363) #35	Fam161b (ENSMOCG00000001828) #36	Coq6 (ENSMOCG00000006495) #37
Northern American deer mouse	MODERN SPECIES	5	ENSPEMG00000001343	Adam21 (ENSPEMG00000000549) #7	Med6 (ENSPEMG00000000191) #8	Ttc9 (ENSPEMG00000028070) #9	Map3k9 (ENSPEMG00000018982) #10	Pcnx (ENSPEMG00000018423) #11	Sipa1l1 (ENSPEMG00000015088) #12	Rgs6 (ENSPEMG00000005178) #14	Dpf3 (ENSPEMG00000014009) #15	Dcaf4 (ENSPEMG00000009925) #16	Zfyve1 (ENSPEMG00000008691) #17	Rbm25 (ENSPEMG00000008001) #18	Psen1 (ENSPEMG00000006667) #19	Papln (ENSPEMG00000000670) #20	Numb (ENSPEMG00000018950) #21	Riox1 (ENSPEMG00000018431) #22	Heatr4 (ENSPEMG00000010857) #24	ENSPEMG00000011640 #26	ENSPEMG00000007692 #26	Acot4 (ENSPEMG00000024969) ##30	ENSPEMG00000009464 #26	ENSPEMG00000007003 #29	Acot6 (ENSPEMG00000020726) ##30	ENSPEMG00000027213	ENSPEMG00000030670 #31	ENSPEMG00000025553	Pnma1 (ENSPEMG00000001767) #32	Mideas (ENSPEMG00000020623) #33	Ptgr2 (ENSPEMG00000020776) #34	Zfp410 (ENSPEMG00000022416) #35	Fam161b (ENSPEMG00000021215) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1502							Rgs6 (ENSNGAG00000015965) #14	Dpf3 (ENSNGAG00000018079) #15	Dcaf4 (ENSNGAG00000012972) #16	Zfyve1 (ENSNGAG00000009405) #17	ENSNGAG00000019959	Rbm25 (ENSNGAG00000018465) #18	Psen1 (ENSNGAG00000017181) #19	Papln (ENSNGAG00000019406) #20	ENSNGAG00000012297 #21	Riox1 (ENSNGAG00000003031) #22	ENSNGAG00000001266 #26	ENSNGAG00000001269 #26	Acot4 (ENSNGAG00000010998) ##30	ENSNGAG00000016652 #29	Acot6 (ENSNGAG00000015805) ##30	Dnal1 (ENSNGAG00000010152) #31	Pnma1 (ENSNGAG00000015203) #32	Mideas (ENSNGAG00000008541) #33	ENSNGAG00000000298	Ptgr2 (ENSNGAG00000016685) #34	Zfp410 (ENSNGAG00000000633) #35	Fam161b (ENSNGAG00000016812) #36	Coq6 (ENSNGAG00000015962) #37	Entpd5 (ENSNGAG00000011773)	Bbof1 (ENSNGAG00000013123)
Lesser Egyptian jerboa	MODERN SPECIES	41	Tnfrsf21 (ENSJJAG00000021218)	Cdc42bpb (ENSJJAG00000021480)	ENSJJAG00000018259	Exoc3l4 (ENSJJAG00000011125)	Tnfaip2 (ENSJJAG00000010132)	Sipa1l1 (ENSJJAG00000023961) #12	Rgs6 (ENSJJAG00000022127) #14	Dpf3 (ENSJJAG00000014377) #15	Dcaf4 (ENSJJAG00000021188) #16	ENSJJAG00000018792 #17	ENSJJAG00000024002	ENSJJAG00000022825	Psen1 (ENSJJAG00000002135) #19	Papln (ENSJJAG00000000927) #20	Numb (ENSJJAG00000019014) #21	Riox1 (ENSJJAG00000019037) #22	Heatr4 (ENSJJAG00000018627) #24	ENSJJAG00000014618 ##30	ENSJJAG00000011596	Dnal1 (ENSJJAG00000017347) #31	Pnma1 (ENSJJAG00000002278) #32	Mideas (ENSJJAG00000012181) #33	Ptgr2 (ENSJJAG00000004075) #34	Zfp410 (ENSJJAG00000011182) #35	Fam161b (ENSJJAG00000010436) #36	Coq6 (ENSJJAG00000013225) #37	Entpd5 (ENSJJAG00000012303)	Bbof1 (ENSJJAG00000012977)	Aldh6a1 (ENSJJAG00000005519)	ENSJJAG00000015460	Vsx2 (ENSJJAG00000011877)
Kangaroo rat	MODERN SPECIES	321	Synj2bp (ENSDORG00000010450)	Med6 (ENSDORG00000014901) #8	Ttc9 (ENSDORG00000027151) #9	Map3k9 (ENSDORG00000011084) #10	Pcnx (ENSDORG00000015586) #11	Sipa1l1 (ENSDORG00000014657) #12	ENSDORG00000023931	Rgs6 (ENSDORG00000015367) #14	Dpf3 (ENSDORG00000007820) #15	Dcaf4 (ENSDORG00000002888) #16	Zfyve1 (ENSDORG00000015230) #17	Rbm25 (ENSDORG00000013247) #18	Psen1 (ENSDORG00000001780) #19	Papln (ENSDORG00000007325) #20	Numb (ENSDORG00000007326) #21	Riox1 (ENSDORG00000028870) #22	Heatr4 (ENSDORG00000005873) #24	ENSDORG00000013571 #26	ENSDORG00000005537 #29	ENSDORG00000013097 #29	ENSDORG00000000064 ##30	Dnal1 (ENSDORG00000015187) #31	ENSDORG00000025611 ##32	Mideas (ENSDORG00000015681) #33	Ptgr2 (ENSDORG00000024075) #34	Zfp410 (ENSDORG00000009293) #35	Fam161b (ENSDORG00000009295) #36	Coq6 (ENSDORG00000009297) #37	ENSDORG00000001878	Rnf113a2 (ENSDORG00000027624)	ENSDORG00000005218
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Sciuridae	ANCESTRAL SPECIES	8	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402.f
Marmotini	ANCESTRAL SPECIES	27	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #26	ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Alpin marmot	MODERN SPECIES	1	ENSMMMG00000015068	ADAM21 (ENSMMMG00000015081) #7	ADAM20 (ENSMMMG00000015097)	MED6 (ENSMMMG00000015151) #8	MAP3K9 (ENSMMMG00000015173) #10	PCNX1 (ENSMMMG00000015257) #11	SIPA1L1 (ENSMMMG00000015319) #12	RGS6 (ENSMMMG00000015497) #14	DPF3 (ENSMMMG00000015579) #15	ENSMMMG00000015602 #16	ZFYVE1 (ENSMMMG00000015623) #17	RBM25 (ENSMMMG00000015650) #18	PSEN1 (ENSMMMG00000015676) #19	PAPLN (ENSMMMG00000015699) #20	NUMB (ENSMMMG00000015813) #21	RIOX1 (ENSMMMG00000015975) #22	ENSMMMG00000015982 #26	ENSMMMG00000015989 #26	ENSMMMG00000015998 #26	ENSMMMG00000016020 ##30	DNAL1 (ENSMMMG00000016024) #31	PNMA1 (ENSMMMG00000016038) #32	MIDEAS (ENSMMMG00000016040) #33	PTGR2 (ENSMMMG00000016067) #34	ENSMMMG00000016079	ZNF410 (ENSMMMG00000016081) #35	FAM161B (ENSMMMG00000016102) #36	COQ6 (ENSMMMG00000016120) #37	ENTPD5 (ENSMMMG00000016134)	BBOF1 (ENSMMMG00000016213)	ALDH6A1 (ENSMMMG00000016229)
Marmotini_b	ANCESTRAL SPECIES	31	ENSGT00940000161933.jb	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.b #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #26	ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Squirrel	MODERN SPECIES	88	ENSSTOG00000022855	ADAM21 (ENSSTOG00000028832) #7	MED6 (ENSSTOG00000014084) #8	MAP3K9 (ENSSTOG00000014094) #10	PCNX1 (ENSSTOG00000013614) #11	ENSSTOG00000030589	SIPA1L1 (ENSSTOG00000010105) #12	RGS6 (ENSSTOG00000013412) #14	DPF3 (ENSSTOG00000011091) #15	ENSSTOG00000020210 #16	ZFYVE1 (ENSSTOG00000011109) #17	RBM25 (ENSSTOG00000011117) #18	PSEN1 (ENSSTOG00000003845) #19	PAPLN (ENSSTOG00000003857) #20	ENSSTOG00000003900 #21	RIOX1 (ENSSTOG00000024278) #22	HEATR4 (ENSSTOG00000007745) #24	ENSSTOG00000032187 #26	ENSSTOG00000003345 #26	ACOT4 (ENSSTOG00000003338) ##30	ACOT6 (ENSSTOG00000003091) ##30	DNAL1 (ENSSTOG00000000420) #31	ENSSTOG00000029464	PNMA1 (ENSSTOG00000000422) #32	MIDEAS (ENSSTOG00000000423) #33	PTGR2 (ENSSTOG00000008590) #34	ZNF410 (ENSSTOG00000024235) #35	FAM161B (ENSSTOG00000029202) #36	COQ6 (ENSSTOG00000016439) #37	ENTPD5 (ENSSTOG00000008069)	ENSSTOG00000008087
Arctic ground squirrel	MODERN SPECIES	8			MED6 (ENSUPAG00010016393) #8	TTC9 (ENSUPAG00010016377) #9	MAP3K9 (ENSUPAG00010016024) #10	PCNX1 (ENSUPAG00010015898) #11	SIPA1L1 (ENSUPAG00010015844) #12	RGS6 (ENSUPAG00010015605) #14	DPF3 (ENSUPAG00010015555) #15	ENSUPAG00010015527 #16	ZFYVE1 (ENSUPAG00010015501) #17	RBM25 (ENSUPAG00010015461) #18	PSEN1 (ENSUPAG00010015426) #19	PAPLN (ENSUPAG00010015337) #20	NUMB (ENSUPAG00010015200) #21	RIOX1 (ENSUPAG00010015192) #22	ENSUPAG00010015167 #24	ENSUPAG00010015131 #26	ACOT4 (ENSUPAG00010015117) ##30	ACOT6 (ENSUPAG00010015106) ##30	DNAL1 (ENSUPAG00010015067) #31	PNMA1 (ENSUPAG00010015061) #32	MIDEAS (ENSUPAG00010014994) #33	ENSUPAG00010014987	PTGR2 (ENSUPAG00010014963) #34	ZNF410 (ENSUPAG00010014867) #35	FAM161B (ENSUPAG00010014838) #36	COQ6 (ENSUPAG00010014809) #37	ENTPD5 (ENSUPAG00010014644)	BBOF1 (ENSUPAG00010014608)	ALDH6A1 (ENSUPAG00010014582)
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005010644 #8	TTC9 (ENSSVLG00005010601) #9	MAP3K9 (ENSSVLG00005010363) #10	PCNX1 (ENSSVLG00005009899) #11	ENSSVLG00005009795	SIPA1L1 (ENSSVLG00005009679) #12	ENSSVLG00005009607	RGS6 (ENSSVLG00005008662) #14	DPF3 (ENSSVLG00005008293) #15	ENSSVLG00005008049 #16	ZFYVE1 (ENSSVLG00005007958) #17	RBM25 (ENSSVLG00005007885) #18	PSEN1 (ENSSVLG00005007728) #19	PAPLN (ENSSVLG00005007348) #20	NUMB (ENSSVLG00005007168) #21	RIOX1 (ENSSVLG00005007089) #22	ENSSVLG00005007042 #24	ENSSVLG00005007000 #26	ENSSVLG00005006975	ENSSVLG00005006698 #26	ENSSVLG00005006583	ACOT4 (ENSSVLG00005006548) ##30	ENSSVLG00005006522 ##30	DNAL1 (ENSSVLG00005006438) #31	PNMA1 (ENSSVLG00005006415) #32	MIDEAS (ENSSVLG00005006379) #33	PTGR2 (ENSSVLG00005006327) #34	ZNF410 (ENSSVLG00005006231) #35	FAM161B (ENSSVLG00005006140) #36	COQ6 (ENSSVLG00005006026) #37	ENTPD5 (ENSSVLG00005005845)
Hystricomorpha	ANCESTRAL SPECIES	33	ENSGT00940000162712 #7	ENSGT00940000161933	ENSGT00390000017666.p #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Naked mole-rat female	MODERN SPECIES	18	ENSHGLG00000036909	RGS6 (ENSHGLG00000012031) #14	ENSHGLG00000048633	DPF3 (ENSHGLG00000006635) #15	ENSHGLG00000042994 #16	ENSHGLG00000047889	ZFYVE1 (ENSHGLG00000015923) #17	ENSHGLG00000035871	ENSHGLG00000014745 #18	PSEN1 (ENSHGLG00000044979) #19	PAPLN (ENSHGLG00000013495) #20	ENSHGLG00000017752 #21	ENSHGLG00000039431	ENSHGLG00000039363	ENSHGLG00000049066 #24	RIOX1 (ENSHGLG00000034391) #22	ENSHGLG00000047596 #30	ENSHGLG00000048609	ACOT6 (ENSHGLG00000040633) ##30	ENSHGLG00000013635	DNAL1 (ENSHGLG00000013059) #31	PNMA1 (ENSHGLG00000050390) #32	MIDEAS (ENSHGLG00000012075) #33	PTGR2 (ENSHGLG00000009670) #34	ZNF410 (ENSHGLG00000008562) #35	FAM161B (ENSHGLG00000007604) #36	COQ6 (ENSHGLG00000006532) #37	ENTPD5 (ENSHGLG00000044767)	ENSHGLG00000045022	ALDH6A1 (ENSHGLG00000008121)	LIN52 (ENSHGLG00000045214)
Hystricomorpha_a	ANCESTRAL SPECIES	27	ENSGT00830000128402	ENSGT00940000161933	ENSGT00390000017666.p #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000016292.g.a.b	ENSGT00940000156110
Guinea pig	MODERN SPECIES	20	ENSCPOG00000026757	MED6 (ENSCPOG00000012529) #8	TTC9 (ENSCPOG00000001801) #9	MAP3K9 (ENSCPOG00000001803) #10	PCNX1 (ENSCPOG00000001806) #11	ENSCPOG00000033708	SIPA1L1 (ENSCPOG00000013071) #12	RGS6 (ENSCPOG00000007309) #14	DPF3 (ENSCPOG00000007322) #15	ENSCPOG00000013878 #16	ZFYVE1 (ENSCPOG00000013880) #17	RBM25 (ENSCPOG00000002479) #18	PSEN1 (ENSCPOG00000035027) #19	PAPLN (ENSCPOG00000019279) #20	NUMB (ENSCPOG00000034984) #21	RIOX1 (ENSCPOG00000024797) #22	ENSCPOG00000038505 #26	HEATR4 (ENSCPOG00000001833) #24	ACOT4 (ENSCPOG00000036993) ##30	ACOT6 (ENSCPOG00000032534) ##30	DNAL1 (ENSCPOG00000010655) #31	PNMA1 (ENSCPOG00000010657) #32	MIDEAS (ENSCPOG00000010659) #33	PTGR2 (ENSCPOG00000027073) #34	ZNF410 (ENSCPOG00000009601) #35	FAM161B (ENSCPOG00000040022) #36	COQ6 (ENSCPOG00000009610) #37	ENTPD5 (ENSCPOG00000009621)	ENSCPOG00000015588	RNF113A (ENSCPOG00000038517)	ALDH6A1 (ENSCPOG00000000015)
Hystricomorpha_b	ANCESTRAL SPECIES	46	ENSGT00390000011854	ENSGT00530000064222.b	ENSGT00940000161472 #9	ENSGT00390000017666.p #8	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.a #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.c.b #26	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776
Long-tailed chinchilla	MODERN SPECIES	230			ENSCLAG00000006511 #8	MAP3K9 (ENSCLAG00000006444) #10	PCNX1 (ENSCLAG00000006042) #11	SIPA1L1 (ENSCLAG00000005617) #12	RGS6 (ENSCLAG00000004860) #14	DPF3 (ENSCLAG00000004345) #15	ENSCLAG00000004165 #16	ZFYVE1 (ENSCLAG00000004097) #17	RBM25 (ENSCLAG00000003977) #18	PSEN1 (ENSCLAG00000005284) #19	PAPLN (ENSCLAG00000004775) #20	ENSCLAG00000004464 #21	ENSCLAG00000004315	RIOX1 (ENSCLAG00000004260) #22	HEATR4 (ENSCLAG00000004180) #24	ENSCLAG00000004124 #26	ACOT4 (ENSCLAG00000004063) ##30	ENSCLAG00000004019 #26	ENSCLAG00000003947 ##30	DNAL1 (ENSCLAG00000003917) #31	MIDEAS (ENSCLAG00000003802) #33	PTGR2 (ENSCLAG00000003701) #34	ZNF410 (ENSCLAG00000003640) #35	FAM161B (ENSCLAG00000003575) #36	COQ6 (ENSCLAG00000003521) #37	ENTPD5 (ENSCLAG00000003418)	ENSCLAG00000003357	ALDH6A1 (ENSCLAG00000003304)	LIN52 (ENSCLAG00000003236)
Degu	MODERN SPECIES	48	ENSODEG00000014741	ENSODEG00000014683 #8	TTC9 (ENSODEG00000015092) #9	ENSODEG00000020259	MAP3K9 (ENSODEG00000015307) #10	PCNX1 (ENSODEG00000015239) #11	SIPA1L1 (ENSODEG00000014862) #12	RGS6 (ENSODEG00000017055) #14	DPF3 (ENSODEG00000015669) #15	ZFYVE1 (ENSODEG00000015740) #17	ENSODEG00000015250	ENSODEG00000016847	PSEN1 (ENSODEG00000016888) #19	PAPLN (ENSODEG00000016332) #20	ENSODEG00000015906 #21	RIOX1 (ENSODEG00000015583) #22	HEATR4 (ENSODEG00000015841) #24	ACOT4 (ENSODEG00000015555) ##30	ENSODEG00000015224 #26	ACOT6 (ENSODEG00000015420) ##30	MIDEAS (ENSODEG00000015501) #33	ENSODEG00000020268	ENSODEG00000014976 #34	ENSODEG00000015245	ENSODEG00000015333 #35	FAM161B (ENSODEG00000014840) #36	COQ6 (ENSODEG00000016014) #37	ENTPD5 (ENSODEG00000015910)	ENSODEG00000015055	ALDH6A1 (ENSODEG00000015807)	ENSODEG00000015046
Lagomorpha	ANCESTRAL SPECIES	25							ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT00390000016904 #31	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776	ENSGT00950000182955.a.a.b	ENSGT00390000007874
Rabbit	MODERN SPECIES	12					ENSOCUG00000012114	RGS6 (ENSOCUG00000000341) #14	ENSOCUG00000031853	DPF3 (ENSOCUG00000016740) #15	ENSOCUG00000009405 #16	ZFYVE1 (ENSOCUG00000008398) #17	RBM25 (ENSOCUG00000013737) #18	PSEN1 (ENSOCUG00000014545) #19	PAPLN (ENSOCUG00000010681) #20	NUMB (ENSOCUG00000010702) #21	ENSOCUG00000031673	RIOX1 (ENSOCUG00000021858) #22	HEATR4 (ENSOCUG00000005994) #24	ENSOCUG00000030890	ENSOCUG00000022543 ##30	ENSOCUG00000029229 ##30	DNAL1 (ENSOCUG00000007284) #31	MIDEAS (ENSOCUG00000007290) #33	PTGR2 (ENSOCUG00000006785) #34	ZNF410 (ENSOCUG00000006787) #35	FAM161B (ENSOCUG00000006791) #36	COQ6 (ENSOCUG00000006799) #37	ENSOCUG00000006803	BBOF1 (ENSOCUG00000017487)	ALDH6A1 (ENSOCUG00000025121)	LIN52 (ENSOCUG00000017491)	VSX2 (ENSOCUG00000017496)
Primates	ANCESTRAL SPECIES	2	ENSGT00940000161472 #9	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000161067	ENSGT00390000017666.j #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Lemuriformes	ANCESTRAL SPECIES	28	ENSGT00940000161067	ENSGT00390000017666.j #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Lemuriformes_a	ANCESTRAL SPECIES	11	ENSGT00940000161067	ENSGT00390000017666.j #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Greater bamboo lemur	MODERN SPECIES	802					SIPA1L1 (ENSPSMG00000014702) #12	RGS6 (ENSPSMG00000015304) #14	DPF3 (ENSPSMG00000015731) #15	ENSPSMG00000015744	ENSPSMG00000015813 #16	ZFYVE1 (ENSPSMG00000015851) #17	ENSPSMG00000015868	ENSPSMG00000015962 #18	PSEN1 (ENSPSMG00000016104) #19	PAPLN (ENSPSMG00000016270) #20	NUMB (ENSPSMG00000016550) #21	RIOX1 (ENSPSMG00000016647) #22	ENSPSMG00000016650 #24	ACOT4 (ENSPSMG00000016672) ##30	ENSPSMG00000016682 ##30	ENSPSMG00000016693 #31	SOX3 (ENSPSMG00000016701)
Bushbaby	MODERN SPECIES	135																RIOX1 (ENSOGAG00000027192) #22	ACOT4 (ENSOGAG00000032824) ##30	ACOT6 (ENSOGAG00000003958) ##30	DNAL1 (ENSOGAG00000032854) #31	PNMA1 (ENSOGAG00000004052) #32	MIDEAS (ENSOGAG00000004053) #33	PTGR2 (ENSOGAG00000014524) #34	ZNF410 (ENSOGAG00000025936) #35	FAM161B (ENSOGAG00000006404) #36	COQ6 (ENSOGAG00000006406) #37	ENTPD5 (ENSOGAG00000006408)	ALDH6A1 (ENSOGAG00000003006)	LIN52 (ENSOGAG00000003009)	VSX2 (ENSOGAG00000013552)	ABCD4 (ENSOGAG00000013557)	VRTN (ENSOGAG00000024981)
Haplorrhini	ANCESTRAL SPECIES	12	ENSGT00940000161472 #9	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000161472 #9	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Rhinopithecus	ANCESTRAL SPECIES	229	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00940000153385.b.a.b.oc	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT00940000153052.c.b.a.a.a.a.a.a.b.b.b	ENSGT01010000222336.a.a.a.ob.a.a.o #30
Black snub-nosed monkey	MODERN SPECIES	713	PCNX1 (ENSRBIG00000027567) #11	ENSRBIG00000033864	SIPA1L1 (ENSRBIG00000013622) #12	RGS6 (ENSRBIG00000038422) #14	DPF3 (ENSRBIG00000021314) #15	ENSRBIG00000038609	ENSRBIG00000040543	DCAF4 (ENSRBIG00000041818) #16	ZFYVE1 (ENSRBIG00000036107) #17	RBM25 (ENSRBIG00000039904) #18	PSEN1 (ENSRBIG00000019293) #19	PAPLN (ENSRBIG00000033248) #20	NUMB (ENSRBIG00000043156) #21	ENSRBIG00000015372	HEATR4 (ENSRBIG00000041847) #24	RIOX1 (ENSRBIG00000017859) #22	ENSRBIG00000031681	ENSRBIG00000023969 #30
Golden snub-nosed monkey	MODERN SPECIES	797			RGS6 (ENSRROG00000040751) #14	DPF3 (ENSRROG00000039384) #15	ENSRROG00000045287	ENSRROG00000044529	DCAF4 (ENSRROG00000035960) #16	ZFYVE1 (ENSRROG00000037742) #17	ENSRROG00000028901	RBM25 (ENSRROG00000035556) #18	PSEN1 (ENSRROG00000023023) #19	PAPLN (ENSRROG00000032324) #20	NUMB (ENSRROG00000039499) #21	ENSRROG00000035725	HEATR4 (ENSRROG00000040469) #24	RIOX1 (ENSRROG00000010218) #22	ENSRROG00000039724	ENSRROG00000036776 #30
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT01100000264921	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00860000135749	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT00940000153052.c.b.a.a.a.a.a.b	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00390000017443.s.a.a
Rhesus	MODERN SPECIES	17	TTC9 (ENSMMUG00000056365) #9	ENSMMUG00000051671	MAP3K9 (ENSMMUG00000005786) #10	PCNX1 (ENSMMUG00000019470) #11	SIPA1L1 (ENSMMUG00000020067) #12	RGS6 (ENSMMUG00000001820) #14	DPF3 (ENSMMUG00000016351) #15	ENSMMUG00000063538	DCAF4 (ENSMMUG00000003625) #16	ZFYVE1 (ENSMMUG00000005140) #17	ENSMMUG00000056507	RBM25 (ENSMMUG00000002332) #18	PSEN1 (ENSMMUG00000010173) #19	PAPLN (ENSMMUG00000020195) #20	NUMB (ENSMMUG00000020196) #21	RIOX1 (ENSMMUG00000000315) #22	ENSMMUG00000053481	ENSMMUG00000049894	ENSMMUG00000006855 ##30	DNAL1 (ENSMMUG00000004910) #31	PNMA1 (ENSMMUG00000004911) #32	MIDEAS (ENSMMUG00000004913) #33	PTGR2 (ENSMMUG00000018146) #34	ZNF410 (ENSMMUG00000011144) #35	FAM161B (ENSMMUG00000029273) #36	COQ6 (ENSMMUG00000011148) #37	BBOF1 (ENSMMUG00000012683)	ALDH6A1 (ENSMMUG00000012684)	LIN52 (ENSMMUG00000052506)	VSX2 (ENSMMUG00000029272)	ABCD4 (ENSMMUG00000004041)
Pig-tailed macaque	MODERN SPECIES	214	TTC9 (ENSMNEG00000031012) #9	MAP3K9 (ENSMNEG00000037894) #10	PCNX1 (ENSMNEG00000017837) #11	ENSMNEG00000033356	SIPA1L1 (ENSMNEG00000039216) #12	ENSMNEG00000033671	RGS6 (ENSMNEG00000030946) #14	ENSMNEG00000034035	DPF3 (ENSMNEG00000030722) #15	DCAF4 (ENSMNEG00000036053) #16	ZFYVE1 (ENSMNEG00000029231) #17	RBM25 (ENSMNEG00000032922) #18	PSEN1 (ENSMNEG00000037289) #19	PAPLN (ENSMNEG00000027160) #20	NUMB (ENSMNEG00000034179) #21	RIOX1 (ENSMNEG00000021421) #22	HEATR4 (ENSMNEG00000032384) #24	ENSMNEG00000033296 #30	ACOT4 (ENSMNEG00000028485) ##30	ENSMNEG00000005067 ##30	DNAL1 (ENSMNEG00000034870) #31
Cercopithecinae_b	ANCESTRAL SPECIES	8	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00390000000083.a #22
Sooty mangabey	MODERN SPECIES	303	MAP3K9 (ENSCATG00000030062) #10	PCNX1 (ENSCATG00000021420) #11	SIPA1L1 (ENSCATG00000036653) #12	ENSCATG00000029544	RGS6 (ENSCATG00000040492) #14	DPF3 (ENSCATG00000009867) #15	DCAF4 (ENSCATG00000020304) #16	ENSCATG00000032385	ZFYVE1 (ENSCATG00000037612) #17	ENSCATG00000042248	RBM25 (ENSCATG00000039651) #18	PSEN1 (ENSCATG00000038778) #19	PAPLN (ENSCATG00000042093) #20	NUMB (ENSCATG00000041867) #21	HEATR4 (ENSCATG00000044114) #24	RIOX1 (ENSCATG00000021107) #22	ENSCATG00000029897 #30	ENSCATG00000036501
Hominoidea	ANCESTRAL SPECIES	12	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00900000143785	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Hominidae	ANCESTRAL SPECIES	14	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00900000143785	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	12	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000011943.b	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.i #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00900000143785	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Homo/Pan group	ANCESTRAL SPECIES	11	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000011943.b	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.i #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00900000143785	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Pan	ANCESTRAL SPECIES	8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000153222.a.b.b.b.b.k.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000011943.b	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a.i #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00900000143785	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00550000076451.a.b.a	ENSGT00940000154427.A	ENSGT00940000156110
Bonobo	MODERN SPECIES	5	ADAM20 (ENSPPAG00000015111)	MED6 (ENSPPAG00000042102) #8	TTC9 (ENSPPAG00000035446) #9	MAP3K9 (ENSPPAG00000027733) #10	PCNX1 (ENSPPAG00000038593) #11	SIPA1L1 (ENSPPAG00000000429) #12	ENSPPAG00000022724 #14	DPF3 (ENSPPAG00000037348) #15	DCAF4 (ENSPPAG00000029989) #16	ZFYVE1 (ENSPPAG00000043760) #17	RBM25 (ENSPPAG00000039402) #18	PSEN1 (ENSPPAG00000038712) #19	PAPLN (ENSPPAG00000042474) #20	NUMB (ENSPPAG00000022878) #21	HEATR4 (ENSPPAG00000018626) #24	RIOX1 (ENSPPAG00000021453) #22	ACOT2 (ENSPPAG00000003795) #30	ACOT4 (ENSPPAG00000037580) ##30	ENSPPAG00000012443 ##30	DNAL1 (ENSPPAG00000038940) #31	PNMA1 (ENSPPAG00000016978) #32	MIDEAS (ENSPPAG00000043022) #33	ENSPPAG00000010721	PTGR2 (ENSPPAG00000043789) #34	ZNF410 (ENSPPAG00000038897) #35	FAM161B (ENSPPAG00000036655) #36	COQ6 (ENSPPAG00000037999) #37	ENTPD5 (ENSPPAG00000029076)	ENSPPAG00000028641	BBOF1 (ENSPPAG00000034088)	ALDH6A1 (ENSPPAG00000030111)
Human	MODERN SPECIES	5	ADAM20 (ENSG00000134007)	MED6 (ENSG00000133997) #8	TTC9 (ENSG00000133985) #9	MAP3K9 (ENSG00000006432) #10	PCNX1 (ENSG00000100731) #11	SIPA1L1 (ENSG00000197555) #12	RGS6 (ENSG00000182732) #14	DPF3 (ENSG00000205683) #15	DCAF4 (ENSG00000119599) #16	ZFYVE1 (ENSG00000165861) #17	RBM25 (ENSG00000119707) #18	PSEN1 (ENSG00000080815) #19	PAPLN (ENSG00000100767) #20	NUMB (ENSG00000133961) #21	HEATR4 (ENSG00000187105) #24	RIOX1 (ENSG00000170468) #22	ACOT1 (ENSG00000184227) #30	ACOT2 (ENSG00000119673) #30	ACOT4 (ENSG00000177465) ##30	ACOT6 (ENSG00000205669) ##30	DNAL1 (ENSG00000119661) #31	PNMA1 (ENSG00000176903) #32	MIDEAS (ENSG00000156030) #33	PTGR2 (ENSG00000140043) #34	ZNF410 (ENSG00000119725) #35	FAM161B (ENSG00000156050) #36	COQ6 (ENSG00000119723) #37	ENTPD5 (ENSG00000187097)	BBOF1 (ENSG00000119636)	ALDH6A1 (ENSG00000119711)	LIN52 (ENSG00000205659)
Orangutan	MODERN SPECIES	5	MED6 (ENSPPYG00000005954) #8	TTC9 (ENSPPYG00000030644) #9	MAP3K9 (ENSPPYG00000005956) #10	PCNX1 (ENSPPYG00000005957) #11	SIPA1L1 (ENSPPYG00000005960) #12	ENSPPYG00000030046	RGS6 (ENSPPYG00000005962) #14	ENSPPYG00000005963 #15	DCAF4 (ENSPPYG00000005965) #16	ZFYVE1 (ENSPPYG00000005966) #17	RBM25 (ENSPPYG00000037322) #18	PSEN1 (ENSPPYG00000005967) #19	PAPLN (ENSPPYG00000005968) #20	NUMB (ENSPPYG00000041351) #21	HEATR4 (ENSPPYG00000005970) #24	RIOX1 (ENSPPYG00000032048) #22	ENSPPYG00000033025 #30	ENSPPYG00000005971 #30	ACOT4 (ENSPPYG00000029617) ##30	ENSPPYG00000029646 ##30	DNAL1 (ENSPPYG00000005973) #31	PNMA1 (ENSPPYG00000005974) #32	MIDEAS (ENSPPYG00000005975) #33	PTGR2 (ENSPPYG00000005976) #34	ZNF410 (ENSPPYG00000037257) #35	FAM161B (ENSPPYG00000038071) #36	ENSPPYG00000005978 #37	ENTPD5 (ENSPPYG00000030358)	BBOF1 (ENSPPYG00000005979)	ALDH6A1 (ENSPPYG00000005980)	LIN52 (ENSPPYG00000032254)
Gibbon	MODERN SPECIES	10	PCNX1 (ENSNLEG00000001896) #11	ENSNLEG00000036319	SIPA1L1 (ENSNLEG00000002117) #12	ENSNLEG00000002297 #14	ENSNLEG00000002403 #15	ENSNLEG00000035680	ENSNLEG00000035129	ENSNLEG00000028662	DCAF4 (ENSNLEG00000002449) #16	ZFYVE1 (ENSNLEG00000002632) #17	RBM25 (ENSNLEG00000002701) #18	PSEN1 (ENSNLEG00000002855) #19	PAPLN (ENSNLEG00000002925) #20	NUMB (ENSNLEG00000002944) #21	HEATR4 (ENSNLEG00000003060) #24	RIOX1 (ENSNLEG00000003130) #22	ENSNLEG00000027838 #30	DTD2 (ENSNLEG00000034317)	NUBPL (ENSNLEG00000003141)	ENSNLEG00000028683	ENSNLEG00000003168	AKAP6 (ENSNLEG00000003187)	ENSNLEG00000032055	ENSNLEG00000032145	EGLN3 (ENSNLEG00000003247)	SPTSSA (ENSNLEG00000029839)	EAPP (ENSNLEG00000034702)	SNX6 (ENSNLEG00000003310)	CFL2 (ENSNLEG00000003417)	BAZ1A (ENSNLEG00000003440)	SRP54 (ENSNLEG00000003496)
Platyrrhini	ANCESTRAL SPECIES	4	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000155162.c.b	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Cebidae	ANCESTRAL SPECIES	3	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000155162.c.b	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Marmoset	MODERN SPECIES	1	ENSCJAG00000080004	SIPA1L1 (ENSCJAG00000014597) #12	ENSCJAG00000085303	ENSCJAG00000070816	ENSCJAG00000073976	RGS6 (ENSCJAG00000014537) #14	DPF3 (ENSCJAG00000014522) #15	ENSCJAG00000014514 #16	ZFYVE1 (ENSCJAG00000014498) #17	ENSCJAG00000077374	ENSCJAG00000014441 #18	PSEN1 (ENSCJAG00000014387) #19	PAPLN (ENSCJAG00000014352) #20	NUMB (ENSCJAG00000014264) #21	ENSCJAG00000082842	RIOX1 (ENSCJAG00000042587) #22	ENSCJAG00000009908 #24	ACOT4 (ENSCJAG00000009911) ##30	ENSCJAG00000037095 ##30	DNAL1 (ENSCJAG00000009922) #31	PNMA1 (ENSCJAG00000042056) #32	MIDEAS (ENSCJAG00000009935) #33	PTGR2 (ENSCJAG00000011505) #34	ENSCJAG00000085540	ZNF410 (ENSCJAG00000020308) #35	FAM161B (ENSCJAG00000020363) #36	COQ6 (ENSCJAG00000065534) #37	ENTPD5 (ENSCJAG00000020391)	BBOF1 (ENSCJAG00000020404)	ALDH6A1 (ENSCJAG00000020412)	LIN52 (ENSCJAG00000047702)
Cebidae_a	ANCESTRAL SPECIES	4	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000155162.c.b	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546.a #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Bolivian squirrel monkey	MODERN SPECIES	52	ENSSBOG00000027808	PCNX1 (ENSSBOG00000021906) #11	ENSSBOG00000034324	SIPA1L1 (ENSSBOG00000025880) #12	ENSSBOG00000027922	ENSSBOG00000007314	RGS6 (ENSSBOG00000029364) #14	DPF3 (ENSSBOG00000034660) #15	DCAF4 (ENSSBOG00000033529) #16	ZFYVE1 (ENSSBOG00000024876) #17	RBM25 (ENSSBOG00000034153) #18	PSEN1 (ENSSBOG00000023450) #19	PAPLN (ENSSBOG00000025394) #20	NUMB (ENSSBOG00000033352) #21	HEATR4 (ENSSBOG00000018986) #24	RIOX1 (ENSSBOG00000013673) #22	ENSSBOG00000034097 #30	ACOT4 (ENSSBOG00000011298) ##30	ENSSBOG00000021771 ##30	ENSSBOG00000022744	ENSSBOG00000025995 #31	MIDEAS (ENSSBOG00000029806) #33	PTGR2 (ENSSBOG00000026681) #34	ZNF410 (ENSSBOG00000032182) #35	ENSSBOG00000034409 #36	COQ6 (ENSSBOG00000028801) #37	ENTPD5 (ENSSBOG00000026410)	BBOF1 (ENSSBOG00000032274)	ALDH6A1 (ENSSBOG00000023484)	LIN52 (ENSSBOG00000034707)	ENSSBOG00000022778
Capuchin	MODERN SPECIES	54	ENSCCAG00000037545	PCNX1 (ENSCCAG00000029639) #11	SNRPC (ENSCCAG00000036059)	SIPA1L1 (ENSCCAG00000030332) #12	ENSCCAG00000017345	RGS6 (ENSCCAG00000029956) #14	ENSCCAG00000021283	DPF3 (ENSCCAG00000034749) #15	DCAF4 (ENSCCAG00000033783) #16	ZFYVE1 (ENSCCAG00000031934) #17	ENSCCAG00000009724	RBM25 (ENSCCAG00000030446) #18	PSEN1 (ENSCCAG00000036998) #19	PAPLN (ENSCCAG00000032497) #20	NUMB (ENSCCAG00000029310) #21	RIOX1 (ENSCCAG00000019473) #22	HEATR4 (ENSCCAG00000024834) #24	ENSCCAG00000026985 #30	ACOT4 (ENSCCAG00000026334) ##30	ENSCCAG00000028536	ACOT6 (ENSCCAG00000030425) ##30	DNAL1 (ENSCCAG00000024968) #31	PNMA1 (ENSCCAG00000015385) #32	MIDEAS (ENSCCAG00000037089) #33	PTGR2 (ENSCCAG00000033557) #34	ZNF410 (ENSCCAG00000030057) #35	FAM161B (ENSCCAG00000032037) #36	COQ6 (ENSCCAG00000032550) #37	ENTPD5 (ENSCCAG00000027798)	BBOF1 (ENSCCAG00000025685)	ALDH6A1 (ENSCCAG00000033515)
Mas night monkey	MODERN SPECIES	825	SIPA1L1 (ENSANAG00000038424) #12	RGS6 (ENSANAG00000032870) #14	ENSANAG00000035122	DPF3 (ENSANAG00000024095) #15	DCAF4 (ENSANAG00000033863) #16	ZFYVE1 (ENSANAG00000019269) #17	ENSANAG00000021022	ENSANAG00000020515	ENSANAG00000020412	RBM25 (ENSANAG00000028295) #18	ENSANAG00000005418	ENSANAG00000036030	PSEN1 (ENSANAG00000026358) #19	PAPLN (ENSANAG00000021965) #20	NUMB (ENSANAG00000031899) #21	RIOX1 (ENSANAG00000018079) #22	HEATR4 (ENSANAG00000026083) #24	ENSANAG00000025037 #30	ACOT4 (ENSANAG00000020773) ##30	ACOT6 (ENSANAG00000011051) ##30	DNAL1 (ENSANAG00000030053) #31	PNMA1 (ENSANAG00000019370) #32	MIDEAS (ENSANAG00000029623) #33	PTGR2 (ENSANAG00000037046) #34	ZNF410 (ENSANAG00000030872) #35	FAM161B (ENSANAG00000032869) #36	COQ6 (ENSANAG00000031639) #37	ENTPD5 (ENSANAG00000024903)	BBOF1 (ENSANAG00000023794)	ALDH6A1 (ENSANAG00000027801)	LIN52 (ENSANAG00000022775)
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Chiroptera	ANCESTRAL SPECIES	15	ENSGT00940000161933	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Microchiroptera	ANCESTRAL SPECIES	19	ENSGT00940000161933	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Microbat	MODERN SPECIES	1144						SIPA1L1 (ENSMLUG00000005530) #12	RGS6 (ENSMLUG00000009389) #14	DPF3 (ENSMLUG00000002257) #15	ENSMLUG00000000420 #16	ZFYVE1 (ENSMLUG00000000426) #17	ENSMLUG00000015434 #18	PSEN1 (ENSMLUG00000015451) #19	PAPLN (ENSMLUG00000022377) #20	NUMB (ENSMLUG00000015460) #21	HEATR4 (ENSMLUG00000016648) #24	RIOX1 (ENSMLUG00000025072) #22	ENSMLUG00000016666 #30	ENSMLUG00000026578	ACOT4 (ENSMLUG00000016671) ##30	ACOT6 (ENSMLUG00000029850) ##30	ENSMLUG00000029237 ##30	DNAL1 (ENSMLUG00000004830) #31	ENSMLUG00000004833 ##32	MIDEAS (ENSMLUG00000004835) #33	PTGR2 (ENSMLUG00000024299) #34	ZNF410 (ENSMLUG00000008658) #35	FAM161B (ENSMLUG00000008688) #36	COQ6 (ENSMLUG00000008704) #37	ENTPD5 (ENSMLUG00000008730)	BBOF1 (ENSMLUG00000017010)	ALDH6A1 (ENSMLUG00000010050)
Greater horseshoe bat	MODERN SPECIES	24	MAP3K9 (ENSRFEG00010004405) #10	ENSRFEG00010004376	ENSRFEG00010004359	PCNX1 (ENSRFEG00010004288) #11	ENSRFEG00010004252	SIPA1L1 (ENSRFEG00010004221) #12	RGS6 (ENSRFEG00010003911) #14	DPF3 (ENSRFEG00010003693) #15	ENSRFEG00010003634 #16	ZFYVE1 (ENSRFEG00010003575) #17	ENSRFEG00010003540	RBM25 (ENSRFEG00010003517) #18	PSEN1 (ENSRFEG00010003436) #19	PAPLN (ENSRFEG00010003382) #20	NUMB (ENSRFEG00010003279) #21	RIOX1 (ENSRFEG00010003255) #22	HEATR4 (ENSRFEG00010003232) #24	ACOT4 (ENSRFEG00010003211) ##30	ENSRFEG00010003184 #30	DNAL1 (ENSRFEG00010003125) #31	PNMA1 (ENSRFEG00010003104) #32	MIDEAS (ENSRFEG00010003038) #33	ENSRFEG00010002979	PTGR2 (ENSRFEG00010002957) #34	ENSRFEG00010002938	ZNF410 (ENSRFEG00010002841) #35	FAM161B (ENSRFEG00010002768) #36	COQ6 (ENSRFEG00010002723) #37	ENTPD5 (ENSRFEG00010002649)	BBOF1 (ENSRFEG00010002580)	ALDH6A1 (ENSRFEG00010002445)
Equus	ANCESTRAL SPECIES	17	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776
Horse	MODERN SPECIES	16	PCNX1 (ENSECAG00000000934) #11	ENSECAG00000034616	SIPA1L1 (ENSECAG00000024286) #12	ENSECAG00000049526	RGS6 (ENSECAG00000011760) #14	ENSECAG00000046282	DPF3 (ENSECAG00000024660) #15	ENSECAG00000053109	ENSECAG00000015480 #16	ZFYVE1 (ENSECAG00000023029) #17	RBM25 (ENSECAG00000013395) #18	PSEN1 (ENSECAG00000004387) #19	PAPLN (ENSECAG00000007861) #20	NUMB (ENSECAG00000016684) #21	HEATR4 (ENSECAG00000009392) #24	RIOX1 (ENSECAG00000056153) #22	ENSECAG00000033024 #30	ENSECAG00000049659 #30	ENSECAG00000051326 #30	ACOT4 (ENSECAG00000009756) ##30	ACOT6 (ENSECAG00000016290) ##30	DNAL1 (ENSECAG00000033122) #31	PNMA1 (ENSECAG00000004251) #32	MIDEAS (ENSECAG00000005161) #33	PTGR2 (ENSECAG00000013284) #34	ZNF410 (ENSECAG00000014531) #35	FAM161B (ENSECAG00000021896) #36	COQ6 (ENSECAG00000051009) #37	ENTPD5 (ENSECAG00000013212)	BBOF1 (ENSECAG00000005420)	ENSECAG00000058911
Carnivora	ANCESTRAL SPECIES		ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Caniformia	ANCESTRAL SPECIES	15	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Canidae	ANCESTRAL SPECIES	4	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Canis_lupus	ANCESTRAL SPECIES	8	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Dingo	MODERN SPECIES	161	PCNX1 (ENSCAFG00020005261) #11	ENSCAFG00020005203	SIPA1L1 (ENSCAFG00020004730) #12	ENSCAFG00020004638	RGS6 (ENSCAFG00020004610) #14	DPF3 (ENSCAFG00020004577) #15	ENSCAFG00020004563	ENSCAFG00020004555 #16	ZFYVE1 (ENSCAFG00020004549) #17	ENSCAFG00020004548 #18	ENSCAFG00020004545	ENSCAFG00020004536	PSEN1 (ENSCAFG00020004532) #19	PAPLN (ENSCAFG00020004479) #20	NUMB (ENSCAFG00020004468) #21	RIOX1 (ENSCAFG00020004426) #22	ENSCAFG00020004414 #24	ENSCAFG00020004409 #30	ACOT4 (ENSCAFG00020004399) ##30	ACOT6 (ENSCAFG00020004396) ##30	ENSCAFG00020004395	DNAL1 (ENSCAFG00020004388) #31	PNMA1 (ENSCAFG00020004385) #32	MIDEAS (ENSCAFG00020004292) #33	PTGR2 (ENSCAFG00020004198) #34	ZNF410 (ENSCAFG00020004185) #35	FAM161B (ENSCAFG00020004178) #36	COQ6 (ENSCAFG00020004166) #37	ENTPD5 (ENSCAFG00020004058)	BBOF1 (ENSCAFG00020004003)	ALDH6A1 (ENSCAFG00020003666)
Dog	MODERN SPECIES	36	SIPA1L1 (ENSCAFG00845009192) #12	ENSCAFG00845009650	RGS6 (ENSCAFG00845010233) #14	ENSCAFG00845011536	DPF3 (ENSCAFG00845011584) #15	DCAF4 (ENSCAFG00845011739) #16	ZFYVE1 (ENSCAFG00845011945) #17	RBM25 (ENSCAFG00845012038) #18	PSEN1 (ENSCAFG00845012166) #19	ENSCAFG00845012353	PAPLN (ENSCAFG00845012413) #20	NUMB (ENSCAFG00845012636) #21	ENSCAFG00845012842	ENSCAFG00845012882	HEATR4 (ENSCAFG00845012914) #24	RIOX1 (ENSCAFG00845012971) #22	ACOT6 (ENSCAFG00845013022) ##30	DNAL1 (ENSCAFG00845013115) #31	PNMA1 (ENSCAFG00845013185) #32	ELMSAN1 (ENSCAFG00845013233) #33	PTGR2 (ENSCAFG00845013371) #34	ENSCAFG00845013463	ZNF410 (ENSCAFG00845013533) #35	FAM161B (ENSCAFG00845013672) #36	COQ6 (ENSCAFG00845013722) #37	ENTPD5 (ENSCAFG00845013833)	BBOF1 (ENSCAFG00845013911)	ALDH6A1 (ENSCAFG00845013992)	LIN52 (ENSCAFG00845014059)	VSX2 (ENSCAFG00845014112)	ENSCAFG00845014165
Red fox	MODERN SPECIES	71	PCNX1 (ENSVVUG00000004185) #11	ENSVVUG00000004258	SIPA1L1 (ENSVVUG00000004277) #12	ENSVVUG00000004367	RGS6 (ENSVVUG00000004371) #14	DPF3 (ENSVVUG00000004399) #15	DCAF4 (ENSVVUG00000004408) #16	ZFYVE1 (ENSVVUG00000004419) #17	RBM25 (ENSVVUG00000004426) #18	PSEN1 (ENSVVUG00000004448) #19	ENSVVUG00000004671	PAPLN (ENSVVUG00000004677) #20	NUMB (ENSVVUG00000004724) #21	ENSVVUG00000004767	HEATR4 (ENSVVUG00000004796) #24	RIOX1 (ENSVVUG00000004822) #22	ACOT4 (ENSVVUG00000004826) ##30	ACOT6 (ENSVVUG00000004848) ##30	ENSVVUG00000004860	PNMA1 (ENSVVUG00000004868) #32	MIDEAS (ENSVVUG00000004878) #33	PTGR2 (ENSVVUG00000004897) #34	ZNF410 (ENSVVUG00000004918) #35	FAM161B (ENSVVUG00000004966) #36	COQ6 (ENSVVUG00000004972) #37	ENTPD5 (ENSVVUG00000004984)	BBOF1 (ENSVVUG00000004994)	ALDH6A1 (ENSVVUG00000005031)	LIN52 (ENSVVUG00000005034)	VSX2 (ENSVVUG00000005042)	ABCD4 (ENSVVUG00000005058)
Caniformia_b	ANCESTRAL SPECIES	14	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Mustelinae	ANCESTRAL SPECIES	37	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000167417.a	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01050000245403.b
American mink	MODERN SPECIES	49	ENSNVIG00000006848	MAP3K9 (ENSNVIG00000006878) #10	PCNX1 (ENSNVIG00000007015) #11	SIPA1L1 (ENSNVIG00000007202) #12	Q7Z4K5 (ENSNVIG00000007391) #14	DPF3 (ENSNVIG00000007620) #15	ENSNVIG00000007698 #16	ZFYVE1 (ENSNVIG00000007758) #17	ENSNVIG00000007788 #18	ENSNVIG00000007836 #18	ENSNVIG00000007839	PSEN1 (ENSNVIG00000007845) #19	PAPLN (ENSNVIG00000007922) #20	NUMB (ENSNVIG00000008276) #21	ENSNVIG00000008597 #24	RIOX1 (ENSNVIG00000008635) #22	ENSNVIG00000008648 #30	ACOT4 (ENSNVIG00000008658) ##30	ENSNVIG00000008674
Ferret	MODERN SPECIES	208	ADAM21 (ENSMPUG00000019183) #7	ADAM20 (ENSMPUG00000019187)	MED6 (ENSMPUG00000003601) #8	MAP3K9 (ENSMPUG00000003616) #10	PCNX1 (ENSMPUG00000003628) #11	SIPA1L1 (ENSMPUG00000003651) #12	RGS6 (ENSMPUG00000003663) #14	DPF3 (ENSMPUG00000003677) #15	ENSMPUG00000003683 #16	ZFYVE1 (ENSMPUG00000003690) #17	RBM25 (ENSMPUG00000003698) #18	PSEN1 (ENSMPUG00000003705) #19	PAPLN (ENSMPUG00000003711) #20	NUMB (ENSMPUG00000003799) #21	HEATR4 (ENSMPUG00000003814) #24	RIOX1 (ENSMPUG00000003832) #22	ENSMPUG00000003838 #30	ENSMPUG00000003883 ##30
Ursidae	ANCESTRAL SPECIES	10	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Giant Panda	MODERN SPECIES	5	ADAM20 (ENSAMEG00000019828)	ENSAMEG00000007962 #8	ENSAMEG00000025396 #9	ENSAMEG00000008001	MAP3K9 (ENSAMEG00000008002) #10	PCNX1 (ENSAMEG00000008031) #11	SIPA1L1 (ENSAMEG00000006090) #12	RGS6 (ENSAMEG00000016168) #14	DPF3 (ENSAMEG00000016206) #15	ZFYVE1 (ENSAMEG00000016254) #17	RBM25 (ENSAMEG00000016270) #18	PSEN1 (ENSAMEG00000018205) #19	PAPLN (ENSAMEG00000018209) #20	NUMB (ENSAMEG00000018215) #21	HEATR4 (ENSAMEG00000018217) #24	RIOX1 (ENSAMEG00000018220) #22	ENSAMEG00000018221 #30	ACOT4 (ENSAMEG00000027361) ##30	ACOT6 (ENSAMEG00000018224) ##30	ENSAMEG00000025452 ##30	DNAL1 (ENSAMEG00000018225) #31	PNMA1 (ENSAMEG00000019053) #32	MIDEAS (ENSAMEG00000018230) #33	PTGR2 (ENSAMEG00000018232) #34	ZNF410 (ENSAMEG00000029608) #35	FAM161B (ENSAMEG00000018241) #36	COQ6 (ENSAMEG00000018242) #37	ENTPD5 (ENSAMEG00000018251)	BBOF1 (ENSAMEG00000018255)	ALDH6A1 (ENSAMEG00000018257)	LIN52 (ENSAMEG00000026519)
Ursus	ANCESTRAL SPECIES	11	ENSGT00940000167417.a	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00910000147388	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000166770	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
American black bear	MODERN SPECIES	3457																RIOX1 (ENSUAMG00000006915) #22	ENSUAMG00000006913 #24	ENSUAMG00000006911 #30	ENSUAMG00000006908 ##30	ACOT6 (ENSUAMG00000006906) ##30	ENSUAMG00000006903 ##30
Felidae	ANCESTRAL SPECIES	1	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Panthera	ANCESTRAL SPECIES	3	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
Panthera_a	ANCESTRAL SPECIES	7	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005.f #21	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01010000222336.a.a.a.pb ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402
leopard	MODERN SPECIES	109								ENSPPRG00000000080 #16	ZFYVE1 (ENSPPRG00000024613) #17	RBM25 (ENSPPRG00000017374) #18	PSEN1 (ENSPPRG00000009940) #19	PAPLN (ENSPPRG00000008382) #20	NUMB (ENSPPRG00000004643) #21	ENSPPRG00000020804	HEATR4 (ENSPPRG00000000114) #24	RIOX1 (ENSPPRG00000024007) #22	ENSPPRG00000024078 #30	ACOT4 (ENSPPRG00000024125) ##30	ENSPPRG00000024290 ##30	DNAL1 (ENSPPRG00000024432) #31	PNMA1 (ENSPPRG00000020738) #32	MIDEAS (ENSPPRG00000024652) #33	PTGR2 (ENSPPRG00000024906) #34	ZNF410 (ENSPPRG00000024973) #35	FAM161B (ENSPPRG00000025014) #36	COQ6 (ENSPPRG00000025059) #37	ENTPD5 (ENSPPRG00000021643)	BBOF1 (ENSPPRG00000018080)	ALDH6A1 (ENSPPRG00000016252)	LIN52 (ENSPPRG00000014701)	VSX2 (ENSPPRG00000014452)
lion	MODERN SPECIES	6	TTC9 (ENSPLOG00000017301) #9	MAP3K9 (ENSPLOG00000017344) #10	PCNX1 (ENSPLOG00000017454) #11	SIPA1L1 (ENSPLOG00000017972) #12	ENSPLOG00000018078	RGS6 (ENSPLOG00000018169) #14	DPF3 (ENSPLOG00000018551) #15	ENSPLOG00000018852 #16	ZFYVE1 (ENSPLOG00000018965) #17	RBM25 (ENSPLOG00000019022) #18	PSEN1 (ENSPLOG00000019082) #19	PAPLN (ENSPLOG00000000483) #20	ENSPLOG00000000547 #21	ENSPLOG00000000607	ENSPLOG00000000621 #24	RIOX1 (ENSPLOG00000000634) #22	ENSPLOG00000000646 #30	ACOT4 (ENSPLOG00000000671) ##30	ACOT6 (ENSPLOG00000000692) ##30	ENSPLOG00000000753 ##30	DNAL1 (ENSPLOG00000000836) #31	PNMA1 (ENSPLOG00000000861) #32	MIDEAS (ENSPLOG00000000882) #33	PTGR2 (ENSPLOG00000000929) #34	ZNF410 (ENSPLOG00000001034) #35	FAM161B (ENSPLOG00000001079) #36	COQ6 (ENSPLOG00000001111) #37	ENTPD5 (ENSPLOG00000001145)	BBOF1 (ENSPLOG00000001180)	ALDH6A1 (ENSPLOG00000001208)	LIN52 (ENSPLOG00000001251)
Cat	MODERN SPECIES	237	TTC9 (ENSFCAG00000042378) #9	MAP3K9 (ENSFCAG00000037711) #10	PCNX1 (ENSFCAG00000004193) #11	SIPA1L1 (ENSFCAG00000007022) #12	RGS6 (ENSFCAG00000014028) #14	ENSFCAG00000028177	DPF3 (ENSFCAG00000014694) #15	ENSFCAG00000051527	ENSFCAG00000014698 #16	ZFYVE1 (ENSFCAG00000014703) #17	RBM25 (ENSFCAG00000011716) #18	PSEN1 (ENSFCAG00000028093) #19	PAPLN (ENSFCAG00000011718) #20	NUMB (ENSFCAG00000026244) #21	HEATR4 (ENSFCAG00000008136) #24	RIOX1 (ENSFCAG00000042968) #22	ENSFCAG00000037046 ##30	ENSFCAG00000034073 ##30	DNAL1 (ENSFCAG00000031313) #31	PNMA1 (ENSFCAG00000012218) #32	MIDEAS (ENSFCAG00000012220) #33	PTGR2 (ENSFCAG00000024703) #34	ZNF410 (ENSFCAG00000030643) #35	FAM161B (ENSFCAG00000012227) #36	COQ6 (ENSFCAG00000021892) #37	BBOF1 (ENSFCAG00000006200)	ALDH6A1 (ENSFCAG00000006202)	LIN52 (ENSFCAG00000042593)	VSX2 (ENSFCAG00000041695)	ABCD4 (ENSFCAG00000006206)	ENSFCAG00000041962
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Suina	ANCESTRAL SPECIES	24	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776
Pig	MODERN SPECIES	15	MED6 (ENSSSCG00000034290) #8	ENSSSCG00000053210	TTC9 (ENSSSCG00000020701) #9	MAP3K9 (ENSSSCG00000002329) #10	PCNX1 (ENSSSCG00000002330) #11	SIPA1L1 (ENSSSCG00000002332) #12	RGS6 (ENSSSCG00000033093) #14	DPF3 (ENSSSCG00000002333) #15	ENSSSCG00000028159 #16	ZFYVE1 (ENSSSCG00000002337) #17	RBM25 (ENSSSCG00000028663) #18	PSEN1 (ENSSSCG00000002340) #19	PAPLN (ENSSSCG00000002341) #20	NUMB (ENSSSCG00000022178) #21	ENSSSCG00000021676 #24	RIOX1 (ENSSSCG00000002344) #22	ENSSSCG00000062678 #30	ENSSSCG00000056471 ##30	ENSSSCG00000002349 ##30	ACOT6 (ENSSSCG00000002348) ##30	DNAL1 (ENSSSCG00000039469) #31	PNMA1 (ENSSSCG00000062320) #32	MIDEAS (ENSSSCG00000002350) #33	PTGR2 (ENSSSCG00000002351) #34	ZNF410 (ENSSSCG00000002352) #35	FAM161B (ENSSSCG00000002353) #36	COQ6 (ENSSSCG00000002354) #37	ENTPD5 (ENSSSCG00000002355)	BBOF1 (ENSSSCG00000002356)	ALDH6A1 (ENSSSCG00000002357)	LIN52 (ENSSSCG00000055314)
Chacoan peccary	MODERN SPECIES	885	ADAM20 (ENSCWAG00000012898)	MED6 (ENSCWAG00000012933) #8	TTC9 (ENSCWAG00000013020) #9	MAP3K9 (ENSCWAG00000013069) #10	PCNX1 (ENSCWAG00000013395) #11	SIPA1L1 (ENSCWAG00000014078) #12	RGS6 (ENSCWAG00000014412) #14	DPF3 (ENSCWAG00000019522) #15	ENSCWAG00000019651 #16	ZFYVE1 (ENSCWAG00000019785) #17	RBM25 (ENSCWAG00000019846) #18	PSEN1 (ENSCWAG00000019883) #19	ENSCWAG00000019962 #20	NUMB (ENSCWAG00000020014) #21	HEATR4 (ENSCWAG00000020096) #24	RIOX1 (ENSCWAG00000020138) #22	ENSCWAG00000020157 #30	ENSCWAG00000020187 ##30	ENSCWAG00000020201 ##30	ENSCWAG00000020210 ##30	DNAL1 (ENSCWAG00000020227) #31	PNMA1 (ENSCWAG00000020295) #32	MIDEAS (ENSCWAG00000020304) #33	PTGR2 (ENSCWAG00000020361) #34	ZNF410 (ENSCWAG00000020396) #35	FAM161B (ENSCWAG00000020474) #36	COQ6 (ENSCWAG00000020500) #37	ENTPD5 (ENSCWAG00000020536)	BBOF1 (ENSCWAG00000020575)	ALDH6A1 (ENSCWAG00000020593)	LIN52 (ENSCWAG00000020608)
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Cetacea	ANCESTRAL SPECIES	2	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000008092.a.k.b	ENSGT00940000156110	ENSGT00390000008402
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019.w.a #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000008092.a.k.b	ENSGT00940000156110	ENSGT00390000008402
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019.w.a #18	ENSGT00390000011748.f.a.a.b	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000008092.a.k.b	ENSGT00940000156110	ENSGT00390000008402
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019.w.a #18	ENSGT00390000011748.f.a.a.b	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00390000008092.a.k.b	ENSGT00940000156110	ENSGT00390000008402
Beluga whale	MODERN SPECIES	24										ENSDLEG00000004911 #18	ENSDLEG00000004905	ENSDLEG00000004900	PSEN1 (ENSDLEG00000004888) #19	PAPLN (ENSDLEG00000004848) #20	NUMB (ENSDLEG00000004818) #21	RIOX1 (ENSDLEG00000004808) #22	ENSDLEG00000004797 #24	ENSDLEG00000004791 #30	ACOT6 (ENSDLEG00000004777) ##30	DNAL1 (ENSDLEG00000004767) #31	PNMA1 (ENSDLEG00000004762) #32	ELMSAN1 (ENSDLEG00000004742) #33	PTGR2 (ENSDLEG00000004727) #34	ENSDLEG00000004722 #35	FAM161B (ENSDLEG00000004716) #36	COQ6 (ENSDLEG00000004706) #37	ENTPD5 (ENSDLEG00000004699)	ENSDLEG00000004696	BBOF1 (ENSDLEG00000004689)	ALDH6A1 (ENSDLEG00000004681)	LIN52 (ENSDLEG00000004674)
Narwhal	MODERN SPECIES	308	TTC9 (ENSMMNG00015014506) #9	MAP3K9 (ENSMMNG00015014530) #10	PCNX1 (ENSMMNG00015014580) #11	SIPA1L1 (ENSMMNG00015014715) #12	RGS6 (ENSMMNG00015014949) #14	ENSMMNG00015015067	DPF3 (ENSMMNG00015015087) #15	ENSMMNG00015015140 #16	ZFYVE1 (ENSMMNG00015015194) #17	ENSMMNG00015015230 #18	ENSMMNG00015015284	PSEN1 (ENSMMNG00015015312) #19	PAPLN (ENSMMNG00015015359) #20	NUMB (ENSMMNG00015015419) #21	ENSMMNG00015015468 #24	RIOX1 (ENSMMNG00015015480) #22	ENSMMNG00015015493 #30	ACOT4 (ENSMMNG00015015501) ##30	ENSMMNG00015015508 ##30	DNAL1 (ENSMMNG00015015521) #31	PNMA1 (ENSMMNG00015015536) #32	MIDEAS (ENSMMNG00015015547) #33	PTGR2 (ENSMMNG00015015571) #34	ZNF410 (ENSMMNG00015015646) #35	FAM161B (ENSMMNG00015015710) #36	COQ6 (ENSMMNG00015015740) #37	ENTPD5 (ENSMMNG00015015799)	BBOF1 (ENSMMNG00015015862)	ENSMMNG00015015913	ALDH6A1 (ENSMMNG00015015950)	LIN52 (ENSMMNG00015015990)
Vaquita	MODERN SPECIES	11	TTC9 (ENSPSNG00000009761) #9	MAP3K9 (ENSPSNG00000009831) #10	PCNX1 (ENSPSNG00000010019) #11	SIPA1L1 (ENSPSNG00000010540) #12	RGS6 (ENSPSNG00000011020) #14	ENSPSNG00000012992	DPF3 (ENSPSNG00000013076) #15	ENSPSNG00000013330 #16	ZFYVE1 (ENSPSNG00000013598) #17	RBM25 (ENSPSNG00000013760) #18	ENSPSNG00000013848	PSEN1 (ENSPSNG00000013932) #19	PAPLN (ENSPSNG00000014220) #20	NUMB (ENSPSNG00000015416) #21	ENSPSNG00000015683 #24	RIOX1 (ENSPSNG00000015840) #22	ENSPSNG00000015880 #30	ACOT4 (ENSPSNG00000015972) ##30	ENSPSNG00000016028 ##30	DNAL1 (ENSPSNG00000016080) #31	PNMA1 (ENSPSNG00000016212) #32	MIDEAS (ENSPSNG00000016252) #33	ENSPSNG00000016323	ENSPSNG00000016386 #34	ZNF410 (ENSPSNG00000016492) #35	FAM161B (ENSPSNG00000016683) #36	COQ6 (ENSPSNG00000016733) #37	ENTPD5 (ENSPSNG00000016874)	BBOF1 (ENSPSNG00000016939)	ENSPSNG00000017159	ALDH6A1 (ENSPSNG00000017217)
Sperm whale	MODERN SPECIES	2	MED6 (ENSPCTG00005002684) #8	ADAM21 (ENSPCTG00005003014) #7	TTC9 (ENSPCTG00005003137) #9	MAP3K9 (ENSPCTG00005003302) #10	PCNX1 (ENSPCTG00005003741) #11	SIPA1L1 (ENSPCTG00005005182) #12	RGS6 (ENSPCTG00005008714) #14	DPF3 (ENSPCTG00005014656) #15	ENSPCTG00005015279 #16	ZFYVE1 (ENSPCTG00005015653) #17	RBM25 (ENSPCTG00005015944) #18	PSEN1 (ENSPCTG00005016305) #19	PAPLN (ENSPCTG00005017592) #20	NUMB (ENSPCTG00005019456) #21	ENSPCTG00005020210 #24	RIOX1 (ENSPCTG00005020418) #22	ENSPCTG00005020502 #30	ACOT4 (ENSPCTG00005020651) ##30	ACOT6 (ENSPCTG00005020732) ##30	DNAL1 (ENSPCTG00005020845) #31	PNMA1 (ENSPCTG00005021041) #32	ELMSAN1 (ENSPCTG00005021121) #33	PTGR2 (ENSPCTG00005021277) #34	ZNF410 (ENSPCTG00005021580) #35	FAM161B (ENSPCTG00005021920) #36	COQ6 (ENSPCTG00005022055) #37	ENTPD5 (ENSPCTG00005022235)	BBOF1 (ENSPCTG00005022417)	ENSPCTG00005022468	ALDH6A1 (ENSPCTG00005022500)	LIN52 (ENSPCTG00005022555)
Blue whale	MODERN SPECIES	11	MAP3K9 (ENSBMSG00010003254) #10	PCNX1 (ENSBMSG00010003364) #11	SIPA1L1 (ENSBMSG00010003551) #12	RGS6 (ENSBMSG00010004117) #14	ENSBMSG00010005707	DPF3 (ENSBMSG00010005752) #15	ENSBMSG00010005834 #16	ZFYVE1 (ENSBMSG00010005866) #17	RBM25 (ENSBMSG00010005882) #18	ENSBMSG00010005918	PSEN1 (ENSBMSG00010005948) #19	ENSBMSG00010005988	PAPLN (ENSBMSG00010006012) #20	NUMB (ENSBMSG00010006080) #21	ENSBMSG00010006163 #24	RIOX1 (ENSBMSG00010006198) #22	ENSBMSG00010006212 #30	ACOT4 (ENSBMSG00010006272) ##30	ACOT6 (ENSBMSG00010006298) ##30	DNAL1 (ENSBMSG00010006338) #31	PNMA1 (ENSBMSG00010006363) #32	MIDEAS (ENSBMSG00010006405) #33	ENSBMSG00010006484	PTGR2 (ENSBMSG00010006503) #34	ZNF410 (ENSBMSG00010006528) #35	FAM161B (ENSBMSG00010006375) #36	COQ6 (ENSBMSG00010006401) #37	ENTPD5 (ENSBMSG00010006501)	BBOF1 (ENSBMSG00010006525)	ENSBMSG00010006546	LIN52 (ENSBMSG00010006623)
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000162712 #7	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b.f ##30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b.e.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000161933.e	ENSGT00940000162712 #7	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b.f ##30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b.e.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904.a.a #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Bovinae	ANCESTRAL SPECIES	11	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00950000182878.b.a.c.a.a.b.p.b.b.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00950000183198.c.b.b.d	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a.q #30	ENSGT01010000222336.a.a.a.ob.a.b.f.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.r #30	ENSGT01010000222336.a.a.a.ob.a.b.f.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904.a.a #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793.e #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Bos	ANCESTRAL SPECIES	13	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00950000182878.b.a.c.a.a.b.p.b.b.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00950000183198.c.a.a.a.a.c.b	ENSGT00390000009546 #16	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.a.b.b	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207.a #24	ENSGT00390000000083.a #22	ENSGT00390000013207.b #24	ENSGT01010000222336.a.a.a.ob.a.a.q #30	ENSGT01010000222336.a.a.a.ob.a.b.f.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.r #30	ENSGT01010000222336.a.a.a.ob.a.b.f.a ##30	ENSGT01010000222336.a.a.a.ob.a.b.e.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904.a.a #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793.e #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b
Bos_b	ANCESTRAL SPECIES	11	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00950000183198.c.a.a.a.a.c.b	ENSGT00390000009546 #16	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.a.b.b	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000000083.a #22	ENSGT00390000013207.b #24	ENSGT01010000222336.a.a.a.ob.a.a.q #30	ENSGT01010000222336.a.a.a.ob.a.b.e.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.r #30	ENSGT01010000222336.a.a.a.ob.a.b.e.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793.e #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000165826.i
Cow	MODERN SPECIES	1	MAP3K9 (ENSBTAG00000005700) #10	PCNX1 (ENSBTAG00000012565) #11	ENSBTAG00000048690	SIPA1L1 (ENSBTAG00000015805) #12	ENSBTAG00000025385	RGS6 (ENSBTAG00000014189) #14	DPF3 (ENSBTAG00000025458) #15	ENSBTAG00000046952	DCAF4 (ENSBTAG00000008713) #16	ZFYVE1 (ENSBTAG00000011041) #17	RBM25 (ENSBTAG00000017177) #18	PSEN1 (ENSBTAG00000011757) #19	PAPLN (ENSBTAG00000011680) #20	NUMB (ENSBTAG00000011683) #21	HEATR4 (ENSBTAG00000002842) #24	RIOX1 (ENSBTAG00000025372) #22	ACOT2 (ENSBTAG00000046814) #30	ACOT4 (ENSBTAG00000002843) ##30	ENSBTAG00000009788 #30	ENSBTAG00000010270 ##30	DNAL1 (ENSBTAG00000015930) ##30	ENSBTAG00000009783	PNMA1 (ENSBTAG00000009271) #32	MIDEAS (ENSBTAG00000009272) #33	PTGR2 (ENSBTAG00000003747) #34	ZNF410 (ENSBTAG00000020327) #35	FAM161B (ENSBTAG00000020329) #36	COQ6 (ENSBTAG00000020331) #37	ENTPD5 (ENSBTAG00000020334)	BBOF1 (ENSBTAG00000018467)	ENSBTAG00000053938
Hybrid Bos Indicus	MODERN SPECIES	1	MAP3K9 (ENSBIXG00005005038) #10	PCNX1 (ENSBIXG00005002329) #11	SIPA1L1 (ENSBIXG00005028352) #12	ENSBIXG00005028293	RGS6 (ENSBIXG00005028221) #14	DPF3 (ENSBIXG00005027707) #15	ENSBIXG00005027663	ENSBIXG00005027627 #16	ENSBIXG00005027433	ZFYVE1 (ENSBIXG00005027414) #17	RBM25 (ENSBIXG00005004710) #18	PSEN1 (ENSBIXG00005027250) #19	PAPLN (ENSBIXG00005027160) #20	NUMB (ENSBIXG00005027025) #21	HEATR4 (ENSBIXG00005004597) #24	RIOX1 (ENSBIXG00005026859) #22	ACOT4 (ENSBIXG00005026831) ##30	ACOT6 (ENSBIXG00005026754) ##30	PNMA1 (ENSBIXG00005026657) #32	MIDEAS (ENSBIXG00005026640) #33	ENSBIXG00005004549 #34	ZNF410 (ENSBIXG00005026565) #35	FAM161B (ENSBIXG00005026463) #36	COQ6 (ENSBIXG00005026440) #37	ENTPD5 (ENSBIXG00005026381)	BBOF1 (ENSBIXG00005005787)	ENSBIXG00005026312	ALDH6A1 (ENSBIXG00005026295)	LIN52 (ENSBIXG00005026222)	VSX2 (ENSBIXG00005026200)	ABCD4 (ENSBIXG00005026163)
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000157417 #11	ENSGT00950000182878.b.a.c.a.a.b.p.b.b.b	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00950000183198.c.b.b.d	ENSGT00940000159153 #15	ENSGT00950000183198.c.a.a.a.a.c.b	ENSGT00390000009546 #16	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.a.b.b	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207.a #24	ENSGT00390000000083.a #22	ENSGT00390000013207.b #24	ENSGT01010000222336.a.a.a.ob.a.a.q #30	ENSGT01010000222336.a.a.a.ob.a.b.f.b ##30	ENSGT01010000222336.a.a.a.ob.a.a.r #30	ENSGT01010000222336.a.a.a.ob.a.b.f.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904.a.a #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793.e #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A
Wild yak	MODERN SPECIES	605							RGS6 (ENSBMUG00000010121) #14	ENSBMUG00000009890	DPF3 (ENSBMUG00000009879) #15	ENSBMUG00000009848 #16	ZFYVE1 (ENSBMUG00000009820) #17	RBM25 (ENSBMUG00000009795) #18	PSEN1 (ENSBMUG00000009750) #19	PAPLN (ENSBMUG00000009643) #20	NUMB (ENSBMUG00000009175) #21	RIOX1 (ENSBMUG00000008961) #22	ENSBMUG00000008951 #24	ENSBMUG00000008918 #30	ENSBMUG00000008907 ##30	ENSBMUG00000008887 #30	ENSBMUG00000008879 ##30	ENSBMUG00000008872 ##30	ENSBMUG00000008866	DNAL1 (ENSBMUG00000008848) #31	PNMA1 (ENSBMUG00000008814) #32	MIDEAS (ENSBMUG00000008801) #33	PTGR2 (ENSBMUG00000008747) #34	ZNF410 (ENSBMUG00000008634) #35	FAM161B (ENSBMUG00000008593) #36	COQ6 (ENSBMUG00000008582) #37	ENTPD5 (ENSBMUG00000008565)
Domestic yak	MODERN SPECIES	2	PCNX1 (ENSBGRG00000009684) #11	ENSBGRG00000010436	SIPA1L1 (ENSBGRG00000010469) #12	RGS6 (ENSBGRG00000010823) #14	DPF3 (ENSBGRG00000013900) #15	ENSBGRG00000014383	ENSBGRG00000014407 #16	ENSBGRG00000014589	ZFYVE1 (ENSBGRG00000014619) #17	RBM25 (ENSBGRG00000014814) #18	ENSBGRG00000014962	PSEN1 (ENSBGRG00000015004) #19	PAPLN (ENSBGRG00000015385) #20	NUMB (ENSBGRG00000016469) #21	ENSBGRG00000016829 #24	RIOX1 (ENSBGRG00000016972) #22	ENSBGRG00000017051 #24	ENSBGRG00000017115 #30	ACOT6 (ENSBGRG00000017306) ##30	ENSBGRG00000017382	ENSBGRG00000017419	ENSBGRG00000017483	ENSBGRG00000017562 #31	PNMA1 (ENSBGRG00000017709) #32	MIDEAS (ENSBGRG00000017732) #33	ENSBGRG00000018082 #34	ZNF410 (ENSBGRG00000018207) #35	FAM161B (ENSBGRG00000018523) #36	COQ6 (ENSBGRG00000018611) #37	ENTPD5 (ENSBGRG00000005910)	BBOF1 (ENSBGRG00000005994)
Caprinae	ANCESTRAL SPECIES	11	ENSGT00940000161067	ENSGT00390000017666 #8	ENSGT00940000161472 #9	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.b.e.b ##30	ENSGT01010000222336.a.a.a.ob.a.b.e.a ##30	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904.a.a #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110
Goat	MODERN SPECIES	1	TTC9 (ENSCHIG00000023182) #9	MAP3K9 (ENSCHIG00000016673) #10	PCNX1 (ENSCHIG00000026327) #11	SIPA1L1 (ENSCHIG00000020272) #12	RGS6 (ENSCHIG00000000519) #14	DPF3 (ENSCHIG00000024523) #15	ENSCHIG00000014966 #16	ZFYVE1 (ENSCHIG00000011591) #17	ENSCHIG00000021905 #18	ENSCHIG00000010764	ENSCHIG00000021190 #18	PSEN1 (ENSCHIG00000025284) #19	PAPLN (ENSCHIG00000018573) #20	ENSCHIG00000023603	NUMB (ENSCHIG00000017411) #21	RIOX1 (ENSCHIG00000024709) #22	ENSCHIG00000013624 #30	ENSCHIG00000022908	ENSCHIG00000008334 ##30	HEATR4 (ENSCHIG00000016869) #24	ENSCHIG00000026395	ENSCHIG00000015407 ##30	ENSCHIG00000025534 ##30	ENSCHIG00000012677 #31	PNMA1 (ENSCHIG00000005409) #32	MIDEAS (ENSCHIG00000025351) #33	PTGR2 (ENSCHIG00000018563) #34	ZNF410 (ENSCHIG00000002289) #35	FAM161B (ENSCHIG00000018206) #36	COQ6 (ENSCHIG00000000785) #37	ENTPD5 (ENSCHIG00000026804)
Rambouillet Sheep	MODERN SPECIES	23	TTC9 (ENSOARG00020004790) #9	MAP3K9 (ENSOARG00020004823) #10	PCNX1 (ENSOARG00020004951) #11	SIPA1L1 (ENSOARG00020005315) #12	RGS6 (ENSOARG00020005779) #14	ENSOARG00020009866	DPF3 (ENSOARG00020009903) #15	DCAF4 (ENSOARG00020010137) #16	ZFYVE1 (ENSOARG00020010565) #17	RBM25 (ENSOARG00020011125) #18	ENSOARG00020011255	PSEN1 (ENSOARG00020011326) #19	PAPLN (ENSOARG00020011520) #20	NUMB (ENSOARG00020011742) #21	ENSOARG00020012105 #24	RIOX1 (ENSOARG00020012228) #22	ENSOARG00020012249 #30	ENSOARG00020012308 ##30	ENSOARG00020012357 #30	ENSOARG00020012431 ##30	ACOT6 (ENSOARG00020012471) ##30	ENSOARG00020012528	ENSOARG00020012555 #31	PNMA1 (ENSOARG00020012650) #32	MIDEAS (ENSOARG00020012681) #33	PTGR2 (ENSOARG00020012884) #34	ZNF410 (ENSOARG00020013087) #35	FAM161B (ENSOARG00020013369) #36	COQ6 (ENSOARG00020013490) #37	ENTPD5 (ENSOARG00020013612)	BBOF1 (ENSOARG00020013850)
Siberian musk deer	MODERN SPECIES	260	MED6 (ENSMMSG00000016803) #8	ENSMMSG00000017035	TTC9 (ENSMMSG00000017056) #9	MAP3K9 (ENSMMSG00000017089) #10	PCNX1 (ENSMMSG00000017386) #11	SIPA1L1 (ENSMMSG00000017694) #12	RGS6 (ENSMMSG00000017838) #14	DPF3 (ENSMMSG00000019667) #15	ENSMMSG00000019774 #16	ZFYVE1 (ENSMMSG00000019863) #17	RBM25 (ENSMMSG00000019940) #18	PSEN1 (ENSMMSG00000019994) #19	PAPLN (ENSMMSG00000020113) #20	NUMB (ENSMMSG00000020223) #21	ENSMMSG00000020471 #24	RIOX1 (ENSMMSG00000020569) #22	ENSMMSG00000020582 #30	ENSMMSG00000020621 ##30	ENSMMSG00000020634	ENSMMSG00000020660 ##30	ACOT6 (ENSMMSG00000020688) ##30	DNAL1 (ENSMMSG00000020722) #31	PNMA1 (ENSMMSG00000020797) #32	MIDEAS (ENSMMSG00000020815) #33	PTGR2 (ENSMMSG00000020873) #34	ZNF410 (ENSMMSG00000020927) #35	FAM161B (ENSMMSG00000020978) #36	COQ6 (ENSMMSG00000021004) #37	ENTPD5 (ENSMMSG00000021133)	BBOF1 (ENSMMSG00000021217)	ALDH6A1 (ENSMMSG00000021323)
Yarkand deer	MODERN SPECIES	3	TTC9 (ENSCHYG00000016904) #9	MAP3K9 (ENSCHYG00000016964) #10	PCNX1 (ENSCHYG00000017125) #11	SIPA1L1 (ENSCHYG00000017418) #12	ENSCHYG00000017850	RGS6 (ENSCHYG00000017945) #14	ENSCHYG00000019264	DPF3 (ENSCHYG00000019349) #15	ENSCHYG00000019600 #16	ZFYVE1 (ENSCHYG00000019875) #17	RBM25 (ENSCHYG00000020072) #18	PSEN1 (ENSCHYG00000020221) #19	PAPLN (ENSCHYG00000020768) #20	NUMB (ENSCHYG00000021106) #21	HEATR4 (ENSCHYG00000021581) #24	RIOX1 (ENSCHYG00000021826) #22	ACOT6 (ENSCHYG00000021951) ##30	DNAL1 (ENSCHYG00000022094) #31	PNMA1 (ENSCHYG00000022219) #32	MIDEAS (ENSCHYG00000022251) #33	PTGR2 (ENSCHYG00000022406) #34	ZNF410 (ENSCHYG00000022523) #35	FAM161B (ENSCHYG00000022799) #36	COQ6 (ENSCHYG00000022859) #37	ENTPD5 (ENSCHYG00000022954)	BBOF1 (ENSCHYG00000023091)	ALDH6A1 (ENSCHYG00000023203)	LIN52 (ENSCHYG00000023413)	ENSCHYG00000023471	VSX2 (ENSCHYG00000023493)	ABCD4 (ENSCHYG00000023537)
Camelidae	ANCESTRAL SPECIES	8	ENSGT00940000158243 #10	ENSGT00940000157417 #11	ENSGT00940000155944 #12	ENSGT00950000183779	ENSGT00940000157159 #14	ENSGT00940000159153 #15	ENSGT00390000009546 #16	ENSGT00390000016097 #17	ENSGT00730000111019 #18	ENSGT00940000158751 #19	ENSGT00940000156891 #20	ENSGT00940000156005 #21	ENSGT00390000013207 #24	ENSGT01010000222336.a.a.a.ob.a.a #30	ENSGT01010000222336.a.a.a.ob.a.b ##30	ENSGT00390000000083.a #22	ENSGT01010000222336.a.a.a.ob.b ##30	ENSGT00390000016904 #31	ENSGT01030000234522.C.b.e.b.a.a.a #32	ENSGT00940000157459 #33	ENSGT00940000156793 #34	ENSGT00940000158098 #35	ENSGT00940000159998 #36	ENSGT00390000015152 #37	ENSGT01100000263540.A.b	ENSGT00940000154427.A	ENSGT00940000156110	ENSGT00390000008402	ENSGT00940000157776	ENSGT00950000182955.a.a.b	ENSGT00390000007874
Arabian camel	MODERN SPECIES	32	MED6 (ENSCDRG00005004215) #8	TTC9 (ENSCDRG00005004509) #9	MAP3K9 (ENSCDRG00005004539) #10	PCNX1 (ENSCDRG00005004677) #11	SIPA1L1 (ENSCDRG00005005026) #12	RGS6 (ENSCDRG00005005336) #14	ENSCDRG00005005948	DPF3 (ENSCDRG00005005965) #15	ENSCDRG00005006011 #16	ZFYVE1 (ENSCDRG00005006074) #17	RBM25 (ENSCDRG00005006176) #18	PSEN1 (ENSCDRG00005006235) #19	PAPLN (ENSCDRG00005006429) #20	NUMB (ENSCDRG00005006647) #21	HEATR4 (ENSCDRG00005007067) #24	RIOX1 (ENSCDRG00005007193) #22	ENSCDRG00005007214 #30	DNAL1 (ENSCDRG00005007353) #31	PNMA1 (ENSCDRG00005007500) #32	MIDEAS (ENSCDRG00005007531) #33	PTGR2 (ENSCDRG00005007915) #34	ZNF410 (ENSCDRG00005008036) #35	FAM161B (ENSCDRG00005008454) #36	COQ6 (ENSCDRG00005008512) #37	ENTPD5 (ENSCDRG00005008760)	BBOF1 (ENSCDRG00005008989)	ALDH6A1 (ENSCDRG00005000113)	LIN52 (ENSCDRG00005000203)	VSX2 (ENSCDRG00005000228)	ABCD4 (ENSCDRG00005000282)	VRTN (ENSCDRG00005000338)