Mammalia ANCESTRAL SPECIES 35 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 ENSGT00390000010194 #36 Theria ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 18 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Boreoeutheria ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Euarchontoglires ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Primates ANCESTRAL SPECIES 22 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Haplorrhini ANCESTRAL SPECIES 40 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Simiiformes ANCESTRAL SPECIES 4 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Catarrhini ANCESTRAL SPECIES 4 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 Macaca ANCESTRAL SPECIES 6 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 Macaca_a ANCESTRAL SPECIES 6 ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.b.b.a.a.b ##12 ENSGT00940000153372.B ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Rhesus MODERN SPECIES 2 ENSMMUG00000002320 #7 DHX37 (ENSMMUG00000017902) #8 BRI3BP (ENSMMUG00000057428) #9 AACS (ENSMMUG00000011117) #10 TMEM132B (ENSMMUG00000020804) #11 ENSMMUG00000060158 #12 ENSMMUG00000061704 #13 TMEM132C (ENSMMUG00000000031) #14 SLC15A4 (ENSMMUG00000005767) #15 GLT1D1 (ENSMMUG00000012564) #16 TMEM132D (ENSMMUG00000012569) #17 FZD10 (ENSMMUG00000006912) #18 PIWIL1 (ENSMMUG00000005629) #19 RIMBP2 (ENSMMUG00000009048) #20 STX2 (ENSMMUG00000020926) #21 RAN (ENSMMUG00000055338) #22 ADGRD1 (ENSMMUG00000002041) #23 ENSMMUG00000056804 #24 SFSWAP (ENSMMUG00000020343) #25 MMP17 (ENSMMUG00000010331) #26 ULK1 (ENSMMUG00000015773) #27 PUS1 (ENSMMUG00000031463) #28 EP400 (ENSMMUG00000017729) #29 DDX51 (ENSMMUG00000062540) #30 NOC4L (ENSMMUG00000006735) #31 GALNT9 (ENSMMUG00000003735) #32 FBRSL1 (ENSMMUG00000017026) #33 LRCOL1 (ENSMMUG00000031455) #34 P2RX2 (ENSMMUG00000015459) #35 POLE (ENSMMUG00000015463) #36 PXMP2 (ENSMMUG00000015464) #37 Crab-eating macaque MODERN SPECIES 2 BRI3BP (ENSMFAG00000041745) #9 AACS (ENSMFAG00000028497) #10 TMEM132B (ENSMFAG00000006929) #11 ENSMFAG00000064660 ENSMFAG00000062581 TMEM132C (ENSMFAG00000034398) #14 ENSMFAG00000056324 SLC15A4 (ENSMFAG00000039467) #15 GLT1D1 (ENSMFAG00000033456) #16 TMEM132D (ENSMFAG00000001610) #17 ENSMFAG00000064430 ENSMFAG00000055558 PIWIL1 (ENSMFAG00000042638) #19 RIMBP2 (ENSMFAG00000041895) #20 STX2 (ENSMFAG00000044704) #21 ENSMFAG00000003494 #22 ADGRD1 (ENSMFAG00000031649) #23 ENSMFAG00000049775 #24 ENSMFAG00000055202 SFSWAP (ENSMFAG00000037352) #25 MMP17 (ENSMFAG00000031345) #26 PUS1 (ENSMFAG00000041194) #28 ENSMFAG00000060196 #29 ENSMFAG00000062600 #29 DDX51 (ENSMFAG00000031189) #30 GALNT9 (ENSMFAG00000001630) #32 ENSMFAG00000047847 P2RX2 (ENSMFAG00000031037) #35 POLE (ENSMFAG00000039401) #36 PXMP2 (ENSMFAG00000001706) #37 ENSMFAG00000045454 Pig-tailed macaque MODERN SPECIES 168 FZD10 (ENSMNEG00000014782) #18 PIWIL1 (ENSMNEG00000044909) #19 RIMBP2 (ENSMNEG00000030380) #20 ENSMNEG00000002433 STX2 (ENSMNEG00000035911) #21 ENSMNEG00000038899 #22 ADGRD1 (ENSMNEG00000035546) #23 SFSWAP (ENSMNEG00000041002) #25 MMP17 (ENSMNEG00000028625) #26 ULK1 (ENSMNEG00000034338) #27 PUS1 (ENSMNEG00000002814) #28 EP400 (ENSMNEG00000036882) #29 ENSMNEG00000036077 ##29 DDX51 (ENSMNEG00000032293) #30 NOC4L (ENSMNEG00000043745) #31 GALNT9 (ENSMNEG00000027427) #32 ENSMNEG00000011614 FBRSL1 (ENSMNEG00000037445) #33 LRCOL1 (ENSMNEG00000035427) #34 P2RX2 (ENSMNEG00000025014) #35 POLE (ENSMNEG00000035160) #36 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Olive baboon MODERN SPECIES 19 ENSPANG00000031065 ENSPANG00000037959 ##12 TMEM132C (ENSPANG00000049155) #14 SLC15A4 (ENSPANG00000045982) #15 GLT1D1 (ENSPANG00000004044) #16 ENSPANG00000048142 ENSPANG00000039109 TMEM132D (ENSPANG00000007556) #17 ENSPANG00000042555 ENSPANG00000037104 ##13 ENSPANG00000038320 FZD10 (ENSPANG00000013056) #18 PIWIL1 (ENSPANG00000003836) #19 RIMBP2 (ENSPANG00000014165) #20 STX2 (ENSPANG00000016429) #21 ENSPANG00000017209 #22 ADGRD1 (ENSPANG00000005289) #23 SFSWAP (ENSPANG00000019737) #25 MMP17 (ENSPANG00000003977) #26 ULK1 (ENSPANG00000000375) #27 PUS1 (ENSPANG00000000376) #28 EP400 (ENSPANG00000014997) #29 DDX51 (ENSPANG00000008107) #30 NOC4L (ENSPANG00000011004) #31 ENSPANG00000030999 #32 ENSPANG00000018730 #32 ENSPANG00000019736 #33 LRCOL1 (ENSPANG00000015387) #34 P2RX2 (ENSPANG00000005288) #35 POLE (ENSPANG00000014285) #36 PXMP2 (ENSPANG00000015721) #37 Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Drill MODERN SPECIES 836 TMEM132D (ENSMLEG00000040050) #17 FZD10 (ENSMLEG00000039910) #18 PIWIL1 (ENSMLEG00000035718) #19 RIMBP2 (ENSMLEG00000040104) #20 ENSMLEG00000024644 STX2 (ENSMLEG00000039252) #21 ENSMLEG00000020195 #22 ADGRD1 (ENSMLEG00000026946) #23 SFSWAP (ENSMLEG00000035728) #25 Sooty mangabey MODERN SPECIES 165 AACS (ENSCATG00000032276) #10 TMEM132B (ENSCATG00000032319) #11 ENSCATG00000021658 ENSCATG00000020431 ENSCATG00000033295 ENSCATG00000043514 TMEM132C (ENSCATG00000016615) #14 SLC15A4 (ENSCATG00000030429) #15 GLT1D1 (ENSCATG00000030373) #16 TMEM132D (ENSCATG00000042495) #17 FZD10 (ENSCATG00000021032) #18 PIWIL1 (ENSCATG00000033903) #19 RIMBP2 (ENSCATG00000037122) #20 ENSCATG00000020937 STX2 (ENSCATG00000038649) #21 ENSCATG00000040806 #22 ADGRD1 (ENSCATG00000021166) #23 SFSWAP (ENSCATG00000031094) #25 MMP17 (ENSCATG00000021343) #26 ULK1 (ENSCATG00000024995) #27 PUS1 (ENSCATG00000032870) #28 EP400 (ENSCATG00000042990) #29 ENSCATG00000042353 ##29 DDX51 (ENSCATG00000034250) #30 NOC4L (ENSCATG00000035699) #31 Hominoidea ANCESTRAL SPECIES 5 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00390000000056 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631 #24 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 Gibbon MODERN SPECIES 20 C1orf87 (ENSNLEG00000014828) CYP2J2 (ENSNLEG00000014820) HOOK1 (ENSNLEG00000014800) FGGY (ENSNLEG00000014781) ENSNLEG00000014776 MYSM1 (ENSNLEG00000014766) TACSTD2 (ENSNLEG00000018323) OMA1 (ENSNLEG00000014763) ENSNLEG00000029989 DAB1 (ENSNLEG00000014741) C8B (ENSNLEG00000014723) C8A (ENSNLEG00000014710) FYB2 (ENSNLEG00000014691) PRKAA2 (ENSNLEG00000014678) PLPP3 (ENSNLEG00000031721) ENSNLEG00000016180 #22 USP24 (ENSNLEG00000014601) PCSK9 (ENSNLEG00000014590) ENSNLEG00000014589 TMEM61 (ENSNLEG00000014586) DHCR24 (ENSNLEG00000014578) LEXM (ENSNLEG00000014568) TTC22 (ENSNLEG00000014562) FLVCR1 (ENSNLEG00000014539) ENSNLEG00000014519 ANGEL2 (ENSNLEG00000014500) RPS6KC1 (ENSNLEG00000014441) PROX1 (ENSNLEG00000014435) SMYD2 (ENSNLEG00000014428) PTPN14 (ENSNLEG00000014407) CENPF (ENSNLEG00000014381) Hominidae ANCESTRAL SPECIES 4 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00390000000056 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Orangutan MODERN SPECIES 3 SCARB1 (ENSPPYG00000005103) UBC (ENSPPYG00000005104) DHX37 (ENSPPYG00000005106) #8 ENSPPYG00000005107 #9 AACS (ENSPPYG00000005108) #10 TMEM132B (ENSPPYG00000005109) #11 ENSPPYG00000035945 TMEM132C (ENSPPYG00000005113) #14 SLC15A4 (ENSPPYG00000005114) #15 GLT1D1 (ENSPPYG00000005117) #16 TMEM132D (ENSPPYG00000005118) #17 FZD10 (ENSPPYG00000005120) #18 PIWIL1 (ENSPPYG00000005121) #19 RIMBP2 (ENSPPYG00000005122) #20 STX2 (ENSPPYG00000005123) #21 RAN (ENSPPYG00000040933) #22 ADGRD1 (ENSPPYG00000005125) #23 ENSPPYG00000005167 #24 ENSPPYG00000005128 #24 SFSWAP (ENSPPYG00000005129) #25 MMP17 (ENSPPYG00000005130) #26 ENSPPYG00000040438 ULK1 (ENSPPYG00000005131) #27 PUS1 (ENSPPYG00000005132) #28 EP400 (ENSPPYG00000005133) #29 DDX51 (ENSPPYG00000005135) #30 NOC4L (ENSPPYG00000005136) #31 GALNT9 (ENSPPYG00000005137) #32 FBRSL1 (ENSPPYG00000005141) #33 LRCOL1 (ENSPPYG00000038772) #34 P2RX2 (ENSPPYG00000005142) #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00390000002024 #9 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT00910000147302 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Pan ANCESTRAL SPECIES 4 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00910000148934 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00940000155143.w.b ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00410000028631.c #24 ENSGT00910000147992 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 Chimpanzee MODERN SPECIES 3 AACS (ENSPTRG00000005622) #10 TMEM132B (ENSPTRG00000005625) #11 ENSPTRG00000051109 ENSPTRG00000052371 ENSPTRG00000044463 TMEM132C (ENSPTRG00000005627) #14 SLC15A4 (ENSPTRG00000005628) #15 GLT1D1 (ENSPTRG00000005629) #16 ENSPTRG00000051602 TMEM132D (ENSPTRG00000005631) #17 FZD10 (ENSPTRG00000005632) #18 PIWIL1 (ENSPTRG00000005633) #19 ENSPTRG00000045679 RIMBP2 (ENSPTRG00000045413) #20 STX2 (ENSPTRG00000005635) #21 RAN (ENSPTRG00000005636) #22 ADGRD1 (ENSPTRG00000044634) #23 ENSPTRG00000043400 #24 ENSPTRG00000045307 SFSWAP (ENSPTRG00000005640) #25 MMP17 (ENSPTRG00000005641) #26 ENSPTRG00000047610 #27 PUS1 (ENSPTRG00000005643) #28 EP400 (ENSPTRG00000005644) #29 ENSPTRG00000005645 ##29 DDX51 (ENSPTRG00000005647) #30 NOC4L (ENSPTRG00000050596) #31 ENSPTRG00000034555 #32 ENSPTRG00000052128 #32 ENSPTRG00000046929 FBRSL1 (ENSPTRG00000005650) #33 Gorilla DUPLICATION Gorilla MODERN SPECIES 3 ENSGGOG00000010555 #9 AACS (ENSGGOG00000001018) #10 TMEM132B (ENSGGOG00000034913) #11 ENSGGOG00000039384 ENSGGOG00000039454 ENSGGOG00000010992 TMEM132C (ENSGGOG00000008667) #14 SLC15A4 (ENSGGOG00000014472) #15 GLT1D1 (ENSGGOG00000014853) #16 TMEM132D (ENSGGOG00000008709) #17 FZD10 (ENSGGOG00000017014) #18 PIWIL1 (ENSGGOG00000015722) #19 ENSGGOG00000011341 #20 ENSGGOG00000041683 STX2 (ENSGGOG00000005048) #21 ENSGGOG00000015340 #22 ADGRD1 (ENSGGOG00000003537) #23 ENSGGOG00000000340 #24 ENSGGOG00000043010 #24 SFSWAP (ENSGGOG00000014877) #25 MMP17 (ENSGGOG00000007390) #26 ULK1 (ENSGGOG00000001320) #27 PUS1 (ENSGGOG00000009178) #28 EP400 (ENSGGOG00000005669) #29 ENSGGOG00000041170 ##29 NOC4L (ENSGGOG00000010266) #31 DDX51 (ENSGGOG00000010250) #30 GALNT9 (ENSGGOG00000034941) #32 ENSGGOG00000040644 FBRSL1 (ENSGGOG00000009523) #33 ENSGGOG00000040324 #34 Gorilla MODERN SPECIES 19 HLA-G (ENSGGOG00000008012) ENSGGOG00000005772 ENSGGOG00000039717 ENSGGOG00000038876 ENSGGOG00000043114 POLR1H (ENSGGOG00000026358) PPP1R11 (ENSGGOG00000026830) RNF39 (ENSGGOG00000027860) TRIM31 (ENSGGOG00000015219) TRIM40 (ENSGGOG00000004900) TRIM10 (ENSGGOG00000016366) TRIM15 (ENSGGOG00000016379) TRIM26 (ENSGGOG00000008371) ENSGGOG00000039509 TRIM39 (ENSGGOG00000016403) ENSGGOG00000022853 #22 HLA-E (ENSGGOG00000012802) GNL1 (ENSGGOG00000014590) ENSGGOG00000014604 ABCF1 (ENSGGOG00000000968) PPP1R10 (ENSGGOG00000011307) MRPS18B (ENSGGOG00000011317) ATAT1 (ENSGGOG00000011323) C6orf136 (ENSGGOG00000011334) DHX16 (ENSGGOG00000022943) PPP1R18 (ENSGGOG00000000726) NRM (ENSGGOG00000000728) MDC1 (ENSGGOG00000000729) TUBB (ENSGGOG00000022655) FLOT1 (ENSGGOG00000002311) DDR1 (ENSGGOG00000014719) Platyrrhini ANCESTRAL SPECIES 6 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000147034 ENSGT00910000146865 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Mas night monkey MODERN SPECIES 1016 SEC14L4 (ENSANAG00000034806) GAL3ST1 (ENSANAG00000022100) PES1 (ENSANAG00000036411) TCN2 (ENSANAG00000036748) SLC35E4 (ENSANAG00000035899) OSBP2 (ENSANAG00000035358) ENSANAG00000026830 #22 MORC2 (ENSANAG00000036050) ENSANAG00000033897 SMTN (ENSANAG00000023851) ENSANAG00000019669 SELENOM (ENSANAG00000034314) INPP5J (ENSANAG00000026483) PLA2G3 (ENSANAG00000017096) RNF185 (ENSANAG00000028094) LIMK2 (ENSANAG00000016559) PIK3IP1 (ENSANAG00000033197) PATZ1 (ENSANAG00000029603) ENSANAG00000032231 ENSANAG00000037335 EIF4ENIF1 (ENSANAG00000033641) SFI1 (ENSANAG00000010457) Cebidae ANCESTRAL SPECIES 2 ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000146865 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Marmoset MODERN SPECIES 21 BRI3BP (ENSCJAG00000021398) #9 AACS (ENSCJAG00000021394) #10 TMEM132B (ENSCJAG00000004381) #11 ENSCJAG00000075100 ENSCJAG00000083046 TMEM132C (ENSCJAG00000003634) #14 SLC15A4 (ENSCJAG00000003622) #15 GLT1D1 (ENSCJAG00000003602) #16 TMEM132D (ENSCJAG00000003601) #17 FZD10 (ENSCJAG00000048092) #18 PIWIL1 (ENSCJAG00000010879) #19 RIMBP2 (ENSCJAG00000010919) #20 ENSCJAG00000077402 STX2 (ENSCJAG00000012395) #21 ENSCJAG00000084157 ENSCJAG00000003927 #22 ADGRD1 (ENSCJAG00000072406) #23 ENSCJAG00000086398 SFSWAP (ENSCJAG00000003613) #25 MMP17 (ENSCJAG00000003654) #26 ULK1 (ENSCJAG00000003693) #27 PUS1 (ENSCJAG00000003720) #28 EP400 (ENSCJAG00000003733) #29 DDX51 (ENSCJAG00000046414) #30 NOC4L (ENSCJAG00000005405) #31 GALNT9 (ENSCJAG00000010494) #32 ENSCJAG00000085236 FBRSL1 (ENSCJAG00000048392) #33 ENSCJAG00000082694 P2RX2 (ENSCJAG00000012817) #35 POLE (ENSCJAG00000012853) #36 Cebidae_a ANCESTRAL SPECIES 8 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000146865 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 43 ZFYVE16 (ENSSBOG00000035944) SERINC5 (ENSSBOG00000029391) THBS4 (ENSSBOG00000024309) MTX3 (ENSSBOG00000030765) CMYA5 (ENSSBOG00000035707) TENT2 (ENSSBOG00000025595) HOMER1 (ENSSBOG00000030696) ENSSBOG00000022728 JMY (ENSSBOG00000001249) BHMT (ENSSBOG00000030724) DMGDH (ENSSBOG00000035140) ENSSBOG00000011617 ARSB (ENSSBOG00000031483) LHFPL2 (ENSSBOG00000033083) SCAMP1 (ENSSBOG00000029488) ENSSBOG00000034436 #22 AP3B1 (ENSSBOG00000029511) TBCA (ENSSBOG00000031001) OTP (ENSSBOG00000035833) ENSSBOG00000021924 WDR41 (ENSSBOG00000019142) PDE8B (ENSSBOG00000020456) ENSSBOG00000032840 AGGF1 (ENSSBOG00000019539) CRHBP (ENSSBOG00000024077) ENSSBOG00000013156 S100Z (ENSSBOG00000016013) F2RL1 (ENSSBOG00000028683) ENSSBOG00000027642 F2R (ENSSBOG00000033584) IQGAP2 (ENSSBOG00000020078) Bolivian squirrel monkey MODERN SPECIES 82 ENSSBOG00000020164 ENSSBOG00000019808 ENSSBOG00000026023 ENSSBOG00000024726 EPDR1 (ENSSBOG00000033388) SFRP4 (ENSSBOG00000030016) NME8 (ENSSBOG00000023157) ELMO1 (ENSSBOG00000030050) AOAH (ENSSBOG00000035205) ENSSBOG00000011698 ANLN (ENSSBOG00000026014) MATCAP2 (ENSSBOG00000027873) EEPD1 (ENSSBOG00000004032) ENSSBOG00000024125 HERPUD2 (ENSSBOG00000020073) ENSSBOG00000034312 #22 TBX20 (ENSSBOG00000024271) DPY19L2 (ENSSBOG00000020918) DPY19L1 (ENSSBOG00000024443) NPSR1 (ENSSBOG00000024695) BMPER (ENSSBOG00000025567) BBS9 (ENSSBOG00000019693) ENSSBOG00000034496 NT5C3A (ENSSBOG00000033883) ENSSBOG00000022257 FKBP9 (ENSSBOG00000020203) ENSSBOG00000025725 KBTBD2 (ENSSBOG00000023096) ENSSBOG00000032944 AVL9 (ENSSBOG00000030462) ENSSBOG00000012312 Capuchin DUPLICATION Capuchin MODERN SPECIES 50 JMY (ENSCCAG00000020292) BHMT (ENSCCAG00000001311) BHMT2 (ENSCCAG00000025343) ENSCCAG00000025862 DMGDH (ENSCCAG00000029570) ARSB (ENSCCAG00000026253) LHFPL2 (ENSCCAG00000034151) SCAMP1 (ENSCCAG00000020394) ENSCCAG00000001996 #22 AP3B1 (ENSCCAG00000024221) ENSCCAG00000036687 TBCA (ENSCCAG00000034960) OTP (ENSCCAG00000028580) ENSCCAG00000033428 ENSCCAG00000024360 PDE8B (ENSCCAG00000035315) AGGF1 (ENSCCAG00000023174) CRHBP (ENSCCAG00000017626) ENSCCAG00000027406 S100Z (ENSCCAG00000021575) F2RL1 (ENSCCAG00000020451) F2R (ENSCCAG00000035401) F2RL2 (ENSCCAG00000023100) IQGAP2 (ENSCCAG00000032875) Capuchin MODERN SPECIES 323 SLC15A4 (ENSCCAG00000026060) #15 GLT1D1 (ENSCCAG00000020488) #16 ENSCCAG00000031772 TMEM132D (ENSCCAG00000034319) #17 PIWIL1 (ENSCCAG00000036270) #19 RIMBP2 (ENSCCAG00000024259) #20 STX2 (ENSCCAG00000021191) #21 RAN (ENSCCAG00000026184) #22 ADGRD1 (ENSCCAG00000015195) #23 Tarsier MODERN SPECIES 6417 PIWIL1 (ENSTSYG00000006226) #19 RIMBP2 (ENSTSYG00000026574) #20 STX2 (ENSTSYG00000002549) #21 RAN (ENSTSYG00000026170) #22 ADGRD1 (ENSTSYG00000012583) #23 Strepsirrhini ANCESTRAL SPECIES 19 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Lemuriformes ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 13 TMEM132B (ENSMICG00000016099) #11 TMEM132C (ENSMICG00000032345) #14 SLC15A4 (ENSMICG00000009050) #15 GLT1D1 (ENSMICG00000011508) #16 TMEM132D (ENSMICG00000043934) #17 PIWIL1 (ENSMICG00000004852) #19 RIMBP2 (ENSMICG00000004877) #20 STX2 (ENSMICG00000042543) #21 ENSMICG00000000653 #22 ENSMICG00000031143 ENSMICG00000029882 #23 SFSWAP (ENSMICG00000004465) #25 MMP17 (ENSMICG00000029005) #26 ULK1 (ENSMICG00000011757) #27 PUS1 (ENSMICG00000030980) #28 EP400 (ENSMICG00000012024) #29 DDX51 (ENSMICG00000037047) #30 NOC4L (ENSMICG00000011789) #31 GALNT9 (ENSMICG00000017778) #32 ENSMICG00000046556 ENSMICG00000041480 #34 P2RX2 (ENSMICG00000003948) #35 POLE (ENSMICG00000003954) #36 PXMP2 (ENSMICG00000047764) #37 Mouse lemur MODERN SPECIES 13 ENSMICG00000037399 KCTD10 (ENSMICG00000017631) MYO1H (ENSMICG00000029989) FOXN4 (ENSMICG00000017629) ACACB (ENSMICG00000043665) UNG (ENSMICG00000044482) ENSMICG00000030926 ALKBH2 (ENSMICG00000017626) USP30 (ENSMICG00000017625) SVOP (ENSMICG00000017624) ENSMICG00000033782 DAO (ENSMICG00000035232) SSH1 (ENSMICG00000000277) CORO1C (ENSMICG00000037735) SELPLG (ENSMICG00000044874) ENSMICG00000032228 #22 ENSMICG00000013067 SART3 (ENSMICG00000013052) FICD (ENSMICG00000043958) CMKLR1 (ENSMICG00000032427) WSCD2 (ENSMICG00000014280) ENSMICG00000026853 SGSM1 (ENSMICG00000034541) LHFPL7 (ENSMICG00000047942) KIAA1671 (ENSMICG00000037430) CRYBB3 (ENSMICG00000014410) CRYBB2 (ENSMICG00000014674) GRK3 (ENSMICG00000011174) MYO18B (ENSMICG00000011206) SEZ6L (ENSMICG00000013652) ASPHD2 (ENSMICG00000013677) Lemuriformes_a ANCESTRAL SPECIES 266 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 Greater bamboo lemur MODERN SPECIES 2300 ENSPSMG00000001384 #22 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 713 PIWIL1 (ENSPCOG00000007411) #19 RIMBP2 (ENSPCOG00000017375) #20 ENSPCOG00000022520 #21 ENSPCOG00000008220 #22 ENSPCOG00000022883 #23 Coquerels sifaka MODERN SPECIES 338 RELT (ENSPCOG00000014211) FAM168A (ENSPCOG00000020680) PLEKHB1 (ENSPCOG00000019823) RAB6A (ENSPCOG00000021991) ENSPCOG00000025047 PAAF1 (ENSPCOG00000017138) DNAJB13 (ENSPCOG00000025099) UCP2 (ENSPCOG00000027332) UCP3 (ENSPCOG00000018463) C2CD3 (ENSPCOG00000017962) PPME1 (ENSPCOG00000012571) P4HA3 (ENSPCOG00000010138) PGM2L1 (ENSPCOG00000026248) LIPT2 (ENSPCOG00000018043) POLD3 (ENSPCOG00000024555) ENSPCOG00000020966 #22 CHRDL2 (ENSPCOG00000012970) RNF169 (ENSPCOG00000016721) XRRA1 (ENSPCOG00000020432) ENSPCOG00000017986 NEU3 (ENSPCOG00000014477) ENSPCOG00000026765 ENSPCOG00000004225 ENSPCOG00000026342 SLCO2B1 (ENSPCOG00000026296) ARRB1 (ENSPCOG00000020960) RPS3 (ENSPCOG00000028750) KLHL35 (ENSPCOG00000012453) GDPD5 (ENSPCOG00000023523) SERPINH1 (ENSPCOG00000016388) MAP6 (ENSPCOG00000028415) Euarchontoglires_A ANCESTRAL SPECIES 18 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Glires ANCESTRAL SPECIES 19 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Rodentia ANCESTRAL SPECIES 20 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680.w.b ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Rodentia_A ANCESTRAL SPECIES 19 ENSGT00940000153372.B ENSGT00940000163680.x ENSGT00940000163680.w.b ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Hystricomorpha_a ANCESTRAL SPECIES 49 ENSGT00390000016836.a ENSGT00940000159022 ENSGT00940000153372.B ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000004796 Hystricomorpha_b ANCESTRAL SPECIES 51 ENSGT00390000016836.a ENSGT00940000159022 ENSGT00940000153372.B ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000004796 Long-tailed chinchilla MODERN SPECIES 189 RFLNA (ENSCLAG00000012361) NCOR2 (ENSCLAG00000011738) SCARB1 (ENSCLAG00000012537) DHX37 (ENSCLAG00000010370) #8 ENSCLAG00000008002 #9 AACS (ENSCLAG00000007595) #10 TMEM132B (ENSCLAG00000012715) #11 TMEM132C (ENSCLAG00000010330) #14 ENSCLAG00000011341 #15 GLT1D1 (ENSCLAG00000010056) #16 TMEM132D (ENSCLAG00000008193) #17 FZD10 (ENSCLAG00000018081) #18 PIWIL1 (ENSCLAG00000008176) #19 RIMBP2 (ENSCLAG00000007769) #20 STX2 (ENSCLAG00000010335) #21 ENSCLAG00000011499 #22 ADGRD1 (ENSCLAG00000010222) #23 SFSWAP (ENSCLAG00000008380) #25 MMP17 (ENSCLAG00000010241) #26 ULK1 (ENSCLAG00000010373) #27 PUS1 (ENSCLAG00000011689) #28 EP400 (ENSCLAG00000007936) #29 ENSCLAG00000009231 #30 NOC4L (ENSCLAG00000007550) #31 GALNT9 (ENSCLAG00000017287) #32 LRCOL1 (ENSCLAG00000013428) #34 P2RX2 (ENSCLAG00000009585) #35 POLE (ENSCLAG00000008788) #36 PXMP2 (ENSCLAG00000007105) #37 PGAM5 (ENSCLAG00000015494) ANKLE2 (ENSCLAG00000007163) Degu DUPLICATION Degu MODERN SPECIES 96 ENSODEG00000009371 PORCN (ENSODEG00000008780) FTSJ1 (ENSODEG00000009855) ENSODEG00000019635 ENSODEG00000009360 ENSODEG00000009058 ZNF182 (ENSODEG00000010486) ENSODEG00000009466 ZNF81 (ENSODEG00000009602) UXT (ENSODEG00000009123) CFP (ENSODEG00000009141) TIMP1 (ENSODEG00000011225) SYN1 (ENSODEG00000010912) ARAF (ENSODEG00000010748) ZNF157 (ENSODEG00000008760) ENSODEG00000019537 #22 USP11 (ENSODEG00000010135) CDK16 (ENSODEG00000009017) UBA1 (ENSODEG00000009310) RBM10 (ENSODEG00000008955) ENSODEG00000007791 ENSODEG00000013303 ENSODEG00000019613 JADE3 (ENSODEG00000012906) ENSODEG00000008785 RP2 (ENSODEG00000013823) SLC9A7 (ENSODEG00000007868) CHST7 (ENSODEG00000019602) ENSODEG00000011903 SERPINI2 (ENSODEG00000009057) ENSODEG00000008191 Degu MODERN SPECIES 117 NCOR2 (ENSODEG00000009536) ENSODEG00000019559 DHX37 (ENSODEG00000009929) #8 AACS (ENSODEG00000008915) #10 ENSODEG00000019612 ENSODEG00000010443 ENSODEG00000009713 ENSODEG00000009816 ENSODEG00000009405 SLC15A4 (ENSODEG00000009561) #15 ENSODEG00000008825 ENSODEG00000019685 #18 PIWIL1 (ENSODEG00000010629) #19 RIMBP2 (ENSODEG00000009979) #20 STX2 (ENSODEG00000009934) #21 ENSODEG00000008349 #22 SFSWAP (ENSODEG00000008020) #25 MMP17 (ENSODEG00000008852) #26 ULK1 (ENSODEG00000008683) #27 PUS1 (ENSODEG00000008248) #28 EP400 (ENSODEG00000008132) #29 DDX51 (ENSODEG00000009622) #30 NOC4L (ENSODEG00000007796) #31 GALNT9 (ENSODEG00000007555) #32 ENSODEG00000007770 #33 P2RX2 (ENSODEG00000008787) #35 POLE (ENSODEG00000009651) #36 PGAM5 (ENSODEG00000007602) ANKLE2 (ENSODEG00000009410) GOLGA3 (ENSODEG00000008256) CHFR (ENSODEG00000007635) Degu MODERN SPECIES 372 ENSODEG00000018654 ENSODEG00000000960 #22 ENSODEG00000000937 Sciuridae ANCESTRAL SPECIES 24 ENSGT00940000163680.x ENSGT00940000157820.a.a.m ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Eurasian red squirrel MODERN SPECIES 17 SCARB1 (ENSSVLG00005006285) ENSSVLG00005006319 ENSSVLG00005006343 #7 DHX37 (ENSSVLG00005006408) #8 BRI3BP (ENSSVLG00005006690) #9 AACS (ENSSVLG00005006726) #10 TMEM132B (ENSSVLG00005006835) #11 TMEM132C (ENSSVLG00005006887) #14 SLC15A4 (ENSSVLG00005006926) #15 GLT1D1 (ENSSVLG00005007011) #16 TMEM132D (ENSSVLG00005007100) #17 FZD10 (ENSSVLG00005007131) #18 PIWIL1 (ENSSVLG00005007160) #19 RIMBP2 (ENSSVLG00005007284) #20 STX2 (ENSSVLG00005007453) #21 ENSSVLG00005007496 #22 ADGRD1 (ENSSVLG00005007618) #23 SFSWAP (ENSSVLG00005008029) #25 MMP17 (ENSSVLG00005008065) #26 ULK1 (ENSSVLG00005008151) #27 PUS1 (ENSSVLG00005008191) #28 EP400 (ENSSVLG00005008295) #29 ENSSVLG00005008621 #30 NOC4L (ENSSVLG00005008643) #31 GALNT9 (ENSSVLG00005008678) #32 ENSSVLG00005008750 #33 ENSSVLG00005008787 #33 LRCOL1 (ENSSVLG00005008931) #34 P2RX2 (ENSSVLG00005009075) #35 POLE (ENSSVLG00005009649) #36 ENSSVLG00005010247 Marmotini ANCESTRAL SPECIES 87 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Alpin marmot MODERN SPECIES 105 ENSMMMG00000005558 TMEM132C (ENSMMMG00000005539) #14 SLC15A4 (ENSMMMG00000005522) #15 GLT1D1 (ENSMMMG00000005495) #16 TMEM132D (ENSMMMG00000005474) #17 FZD10 (ENSMMMG00000005445) #18 PIWIL1 (ENSMMMG00000005378) #19 RIMBP2 (ENSMMMG00000005259) #20 STX2 (ENSMMMG00000005244) #21 ENSMMMG00000005232 #22 ADGRD1 (ENSMMMG00000005122) #23 SFSWAP (ENSMMMG00000005074) #25 ULK1 (ENSMMMG00000005012) #27 PUS1 (ENSMMMG00000004922) #28 ENSMMMG00000004877 #29 ENSMMMG00000004819 #29 DDX51 (ENSMMMG00000004784) #30 NOC4L (ENSMMMG00000004756) #31 GALNT9 (ENSMMMG00000004734) #32 ENSMMMG00000004726 POLE (ENSMMMG00000004659) #36 ENSMMMG00000004647 PXMP2 (ENSMMMG00000004639) #37 ENSMMMG00000004629 ANKLE2 (ENSMMMG00000004532) Marmotini_b ANCESTRAL SPECIES 135 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Arctic ground squirrel MODERN SPECIES 375 ENSUPAG00010011744 TMEM132C (ENSUPAG00010011736) #14 SLC15A4 (ENSUPAG00010011731) #15 GLT1D1 (ENSUPAG00010011720) #16 TMEM132D (ENSUPAG00010011709) #17 FZD10 (ENSUPAG00010011705) #18 PIWIL1 (ENSUPAG00010011670) #19 RIMBP2 (ENSUPAG00010011601) #20 STX2 (ENSUPAG00010011556) #21 ENSUPAG00010011538 #22 ADGRD1 (ENSUPAG00010011480) #23 CCDC190 (ENSUPAG00010011468) ENSUPAG00010011463 Squirrel MODERN SPECIES 148 ENSSTOG00000022477 CMAS (ENSSTOG00000010303) ABCC9 (ENSSTOG00000001507) KCNJ8 (ENSSTOG00000001502) ENSSTOG00000022058 GYS2 (ENSSTOG00000006383) SPX (ENSSTOG00000006364) GOLT1B (ENSSTOG00000006352) RECQL (ENSSTOG00000006328) PYROXD1 (ENSSTOG00000023758) IAPP (ENSSTOG00000027273) ENSSTOG00000003535 ENSSTOG00000031927 SLCO1C1 (ENSSTOG00000002270) PDE3A (ENSSTOG00000002257) ENSSTOG00000031099 #22 AEBP2 (ENSSTOG00000013380) PLEKHA5 (ENSSTOG00000011009) ENSSTOG00000031361 CAPZA3 (ENSSTOG00000010932) PLCZ1 (ENSSTOG00000010922) ENSSTOG00000016124 ENSSTOG00000032499 RERGL (ENSSTOG00000002655) Rodentia_B ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Kangaroo rat MODERN SPECIES 385 Zfp664 (ENSDORG00000027434) Ncor2 (ENSDORG00000005764) Scarb1 (ENSDORG00000013878) ENSDORG00000002140 Dhx37 (ENSDORG00000012965) #8 Bri3bp (ENSDORG00000027407) #9 Aacs (ENSDORG00000004584) #10 Tmem132b (ENSDORG00000011053) #11 Tmem132c (ENSDORG00000006858) #14 ENSDORG00000003794 #15 Glt1d1 (ENSDORG00000016183) #16 Tmem132d (ENSDORG00000011004) #17 Piwil1 (ENSDORG00000010479) #19 Rimbp2 (ENSDORG00000024138) #20 Stx2 (ENSDORG00000015510) #21 ENSDORG00000028664 #22 Adgrd1 (ENSDORG00000010600) #23 Sfswap (ENSDORG00000010352) #25 Mmp17 (ENSDORG00000010941) #26 Ulk1 (ENSDORG00000011456) #27 Pus1 (ENSDORG00000011455) #28 Ep400 (ENSDORG00000015149) #29 ENSDORG00000015154 #30 Noc4l (ENSDORG00000015155) #31 ENSDORG00000029234 #32 Fbrsl1 (ENSDORG00000028367) #33 Pole (ENSDORG00000001645) #36 Pxmp2 (ENSDORG00000001646) #37 ENSDORG00000023642 Ankle2 (ENSDORG00000005939) Golga3 (ENSDORG00000013207) Myomorpha ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Muroidea ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Murinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Mus ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Shrew mouse MODERN SPECIES 10 Or6z3 (MGP_PahariEiJ_G0021035) MGP_PahariEiJ_G0021034 Or2bd2 (MGP_PahariEiJ_G0021033) MGP_PahariEiJ_G0021032 Smim17 (MGP_PahariEiJ_G0021031) Zfp28 (MGP_PahariEiJ_G0021030) Zfp78 (MGP_PahariEiJ_G0021029) MGP_PahariEiJ_G0021028 Zfp667 (MGP_PahariEiJ_G0021027) MGP_PahariEiJ_G0021026 Zscan5b (MGP_PahariEiJ_G0021025) MGP_PahariEiJ_G0021024 Zfp444 (MGP_PahariEiJ_G0021023) Zfp787 (MGP_PahariEiJ_G0021022) Vmn1r55 (MGP_PahariEiJ_G0021021) MGP_PahariEiJ_G0021020 #22 Rfpl4 (MGP_PahariEiJ_G0021019) Epn1 (MGP_PahariEiJ_G0021018) U2af2 (MGP_PahariEiJ_G0021017) MGP_PahariEiJ_G0021016 MGP_PahariEiJ_G0021015 MGP_PahariEiJ_G0021014 Zfp784 (MGP_PahariEiJ_G0021013) MGP_PahariEiJ_G0021012 Zfp865 (MGP_PahariEiJ_G0021011) Zfp524 (MGP_PahariEiJ_G0021010) MGP_PahariEiJ_G0021009 Zfp579 (MGP_PahariEiJ_G0021008) Sbk3 (MGP_PahariEiJ_G0021007) Sbk2 (MGP_PahariEiJ_G0021006) Ssc5d (MGP_PahariEiJ_G0021005) Cricetidae ANCESTRAL SPECIES 20 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.a ##22 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Cricetidae_B ANCESTRAL SPECIES 19 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00950000182925.D.a.b.a.a.a.b.b ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Northern American deer mouse MODERN SPECIES 466 ENSPEMG00000021073 #22 Prairie vole MODERN SPECIES 7 Pxmp2 (ENSMOCG00000014970) #37 Pgam5 (ENSMOCG00000018637) Ankle2 (ENSMOCG00000016542) ENSMOCG00000006544 Golga3 (ENSMOCG00000013554) Chfr (ENSMOCG00000018701) ENSMOCG00000021337 ENSMOCG00000001664 Slc15a4 (ENSMOCG00000009498) #15 Glt1d1 (ENSMOCG00000012826) #16 Tmem132d (ENSMOCG00000019097) #17 Fzd10 (ENSMOCG00000007918) #18 Piwil1 (ENSMOCG00000015999) #19 Rimbp2 (ENSMOCG00000005039) #20 Stx2 (ENSMOCG00000006885) #21 ENSMOCG00000014611 #22 Adgrd1 (ENSMOCG00000001662) #23 ENSMOCG00000004486 Sfswap (ENSMOCG00000014390) #25 Mmp17 (ENSMOCG00000019964) #26 Zfp11 (ENSMOCG00000001758) Septin14 (ENSMOCG00000020609) ENSMOCG00000008471 Nipsnap2 (ENSMOCG00000006977) Psph (ENSMOCG00000001493) Cct6a (ENSMOCG00000021647) Sumf2 (ENSMOCG00000008829) Phkg1 (ENSMOCG00000020603) ENSMOCG00000021922 ENSMOCG00000021458 Nupr1l (ENSMOCG00000000483) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1865 ENSNGAG00000018220 Fndc3a (ENSNGAG00000010472) Atp12a (ENSNGAG00000019943) ENSNGAG00000016258 Rnf17 (ENSNGAG00000013553) Cenpj (ENSNGAG00000005641) Parp4 (ENSNGAG00000018396) ENSNGAG00000012934 Pspc1 (ENSNGAG00000011271) Zmym5 (ENSNGAG00000013371) Zmym2 (ENSNGAG00000015366) Gja3 (ENSNGAG00000007139) Gjb2 (ENSNGAG00000001303) Gjb6 (ENSNGAG00000000185) Cryl1 (ENSNGAG00000014751) ENSNGAG00000012819 #22 Ift88 (ENSNGAG00000018550) Il17d (ENSNGAG00000015710) Eef1akmt1 (ENSNGAG00000018029) ENSNGAG00000016446 Xpo4 (ENSNGAG00000014823) Lats2 (ENSNGAG00000016051) ENSNGAG00000015061 Ska3 (ENSNGAG00000000176) Mrpl57 (ENSNGAG00000016942) Zdhhc20 (ENSNGAG00000011001) Upper Galilee mountains blind mole rat MODERN SPECIES 868 Rap1a (ENSNGAG00000022775) Inka2 (ENSNGAG00000015197) Ddx20 (ENSNGAG00000022953) Kcnd3 (ENSNGAG00000011906) Cttnbp2nl (ENSNGAG00000021422) Wnt2b (ENSNGAG00000016171) St7l (ENSNGAG00000024221) ENSNGAG00000022738 Mov10 (ENSNGAG00000021868) ENSNGAG00000013328 Ppm1j (ENSNGAG00000021142) Tafa3 (ENSNGAG00000018382) Slc16a1 (ENSNGAG00000014061) Lrig2 (ENSNGAG00000010221) Magi3 (ENSNGAG00000011689) ENSNGAG00000016204 #22 Phtf1 (ENSNGAG00000015016) Rsbn1 (ENSNGAG00000019425) ENSNGAG00000017059 Bcl2l15 (ENSNGAG00000023256) Ap4b1 (ENSNGAG00000003659) Hipk1 (ENSNGAG00000022219) ENSNGAG00000022816 ENSNGAG00000012040 Olfml3 (ENSNGAG00000017564) Syt6 (ENSNGAG00000021329) Trim33 (ENSNGAG00000021291) Bcas2 (ENSNGAG00000011988) Dennd2c (ENSNGAG00000023499) Ampd1 (ENSNGAG00000023553) Nras (ENSNGAG00000007289) Lagomorpha ANCESTRAL SPECIES 348 ENSGT00940000174698 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 Pika MODERN SPECIES 7642 ENSOPRG00000002629 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 3 CAGE1 (ENSOCUG00000009089) RIOK1 (ENSOCUG00000011824) DSP (ENSOCUG00000013150) SNRNP48 (ENSOCUG00000005168) BMP6 (ENSOCUG00000003431) TXNDC5 (ENSOCUG00000023055) BLOC1S5 (ENSOCUG00000025755) EEF1E1 (ENSOCUG00000012587) ENSOCUG00000036458 SLC35B3 (ENSOCUG00000003401) ENSOCUG00000025875 ENSOCUG00000022374 ENSOCUG00000030969 ENSOCUG00000016635 ENSOCUG00000005315 ENSOCUG00000022471 #22 ENSOCUG00000036722 ENSOCUG00000014369 ENSOCUG00000024462 ENSOCUG00000034352 PAK1IP1 (ENSOCUG00000013378) ENSOCUG00000016368 MAK (ENSOCUG00000016374) GCM2 (ENSOCUG00000017698) ENSOCUG00000017702 ELOVL2 (ENSOCUG00000013017) ENSOCUG00000035667 NEDD9 (ENSOCUG00000015292) TMEM170B (ENSOCUG00000022632) ADTRP (ENSOCUG00000000535) ENSOCUG00000029713 Rabbit MODERN SPECIES 554 ENSOCUG00000034855 STX2 (ENSOCUG00000009804) #21 ENSOCUG00000026506 #22 ADGRD1 (ENSOCUG00000005669) #23 SFSWAP (ENSOCUG00000002165) #25 EP400 (ENSOCUG00000006855) #29 NOC4L (ENSOCUG00000002665) #31 ENSOCUG00000014235 #32 ENSOCUG00000032557 #32 Laurasiatheria ANCESTRAL SPECIES 19 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Laurasiatheria_a ANCESTRAL SPECIES 13 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Laurasiatheria_b ANCESTRAL SPECIES 13 ENSGT00940000162439 #7 ENSGT00940000157820.a.b ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Equus ANCESTRAL SPECIES 38 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00950000186457 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Donkey MODERN SPECIES 28 ENSEASG00005017355 #7 ENSEASG00005031459 DHX37 (ENSEASG00005013134) #8 BRI3BP (ENSEASG00005025439) #9 AACS (ENSEASG00005013166) #10 TMEM132B (ENSEASG00005013175) #11 TMEM132C (ENSEASG00005013183) #14 SLC15A4 (ENSEASG00005013184) #15 GLT1D1 (ENSEASG00005013185) #16 TMEM132D (ENSEASG00005013187) #17 ENSEASG00005013188 FZD10 (ENSEASG00005013190) #18 PIWIL1 (ENSEASG00005013191) #19 RIMBP2 (ENSEASG00005013193) #20 STX2 (ENSEASG00005013199) #21 ENSEASG00005013202 #22 ADGRD1 (ENSEASG00005013206) #23 SFSWAP (ENSEASG00005016502) #25 MMP17 (ENSEASG00005016509) #26 ULK1 (ENSEASG00005016522) #27 PUS1 (ENSEASG00005016535) #28 EP400 (ENSEASG00005016567) #29 DDX51 (ENSEASG00005016622) #30 NOC4L (ENSEASG00005016651) #31 GALNT9 (ENSEASG00005016684) #32 ENSEASG00005030426 #33 ENSEASG00005016691 #33 LRCOL1 (ENSEASG00005016695) #34 P2RX2 (ENSEASG00005016698) #35 POLE (ENSEASG00005016705) #36 PXMP2 (ENSEASG00005016716) #37 Chiroptera ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Greater horseshoe bat MODERN SPECIES 24 ENSRFEG00010006909 ENSRFEG00010006889 ENSRFEG00010006875 LRFN5 (ENSRFEG00010004202) ENSRFEG00010004195 ENSRFEG00010004186 ENSRFEG00010004175 FBXO33 (ENSRFEG00010004166) ENSRFEG00010003990 PNN (ENSRFEG00010003899) TRAPPC6B (ENSRFEG00010003856) GEMIN2 (ENSRFEG00010003744) SEC23A (ENSRFEG00010003653) CLEC14A (ENSRFEG00010003621) SSTR1 (ENSRFEG00010003612) ENSRFEG00010003598 #22 ENSRFEG00010003538 ENSRFEG00010003507 FOXA1 (ENSRFEG00010003493) MIPOL1 (ENSRFEG00010003421) SLC25A21 (ENSRFEG00010003365) PAX9 (ENSRFEG00010003330) NKX2-8 (ENSRFEG00010003314) NKX2-1 (ENSRFEG00010003300) MBIP (ENSRFEG00010003230) BRMS1L (ENSRFEG00010003180) RALGAPA1 (ENSRFEG00010003084) INSM2 (ENSRFEG00010003015) ENSRFEG00010002998 NFKBIA (ENSRFEG00010002978) ENSRFEG00010002929 Megabat MODERN SPECIES 5220 ENSPVAG00000014742 #22 Carnivora ANCESTRAL SPECIES 13 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Caniformia ANCESTRAL SPECIES 9 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Caniformia_b ANCESTRAL SPECIES 29 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Ursidae ANCESTRAL SPECIES 34 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.w #29 ENSGT00940000154764.x #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Giant Panda MODERN SPECIES 3 RFLNA (ENSAMEG00000028972) NCOR2 (ENSAMEG00000015417) SCARB1 (ENSAMEG00000015518) DHX37 (ENSAMEG00000015543) #8 BRI3BP (ENSAMEG00000015566) #9 AACS (ENSAMEG00000015576) #10 ENSAMEG00000007967 #11 TMEM132C (ENSAMEG00000025776) #14 SLC15A4 (ENSAMEG00000001898) #15 GLT1D1 (ENSAMEG00000001910) #16 TMEM132D (ENSAMEG00000025208) #17 FZD10 (ENSAMEG00000006572) #18 PIWIL1 (ENSAMEG00000006533) #19 RIMBP2 (ENSAMEG00000006469) #20 STX2 (ENSAMEG00000004235) #21 ENSAMEG00000004222 #22 ADGRD1 (ENSAMEG00000004170) #23 SFSWAP (ENSAMEG00000013818) #25 ENSAMEG00000025116 #26 ENSAMEG00000029839 #26 ULK1 (ENSAMEG00000013726) #27 PUS1 (ENSAMEG00000013715) #28 ENSAMEG00000029387 #29 ENSAMEG00000013687 #29 DDX51 (ENSAMEG00000013674) #30 NOC4L (ENSAMEG00000013649) #31 GALNT9 (ENSAMEG00000013616) #32 ENSAMEG00000030860 ENSAMEG00000025288 #33 P2RX2 (ENSAMEG00000013572) #35 ENSAMEG00000013454 #36 Ursus ANCESTRAL SPECIES 38 ENSGT00390000016836.a ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 Polar bear MODERN SPECIES 153 ZNF664 (ENSUMAG00000002927) NCOR2 (ENSUMAG00000001334) SCARB1 (ENSUMAG00000001024) ENSUMAG00000000822 #7 DHX37 (ENSUMAG00000000800) #8 BRI3BP (ENSUMAG00000000777) #9 AACS (ENSUMAG00000000432) #10 TMEM132B (ENSUMAG00000000348) #11 SLC15A4 (ENSUMAG00000000233) #15 GLT1D1 (ENSUMAG00000000105) #16 TMEM132D (ENSUMAG00000020320) #17 FZD10 (ENSUMAG00000020314) #18 PIWIL1 (ENSUMAG00000020294) #19 RIMBP2 (ENSUMAG00000020157) #20 STX2 (ENSUMAG00000020095) #21 ENSUMAG00000020091 #22 ADGRD1 (ENSUMAG00000019951) #23 American black bear MODERN SPECIES 2621 ENSUAMG00000006978 #22 ADGRD1 (ENSUAMG00000006975) #23 Mustelinae ANCESTRAL SPECIES 126 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 ENSGT00390000004796 American mink MODERN SPECIES 301 TMEM132C (ENSNVIG00000022868) #14 SLC15A4 (ENSNVIG00000022859) #15 GLT1D1 (ENSNVIG00000022850) #16 TMEM132D (ENSNVIG00000022833) #17 FZD10 (ENSNVIG00000022828) #18 PIWIL1 (ENSNVIG00000022826) #19 RIMBP2 (ENSNVIG00000022819) #20 STX2 (ENSNVIG00000022809) #21 ENSNVIG00000022801 #22 ADGRD1 (ENSNVIG00000022771) #23 SFSWAP (ENSNVIG00000022703) #25 ENSNVIG00000022693 MMP17 (ENSNVIG00000022684) #26 ULK1 (ENSNVIG00000022673) #27 PUS1 (ENSNVIG00000022668) #28 EP400 (ENSNVIG00000022609) #29 DDX51 (ENSNVIG00000022592) #30 NOC4L (ENSNVIG00000022583) #31 P2RX2 (ENSNVIG00000022574) #35 POLE (ENSNVIG00000022519) #36 ENSNVIG00000022509 PXMP2 (ENSNVIG00000022505) #37 PGAM5 (ENSNVIG00000022496) ANKLE2 (ENSNVIG00000022465) Ferret MODERN SPECIES 430 TMEM132C (ENSMPUG00000004474) #14 SLC15A4 (ENSMPUG00000004454) #15 GLT1D1 (ENSMPUG00000004445) #16 TMEM132D (ENSMPUG00000004440) #17 ENSMPUG00000004436 ENSMPUG00000004431 FZD10 (ENSMPUG00000004425) #18 PIWIL1 (ENSMPUG00000004243) #19 RIMBP2 (ENSMPUG00000004096) #20 STX2 (ENSMPUG00000004087) #21 ENSMPUG00000004044 #22 ENSMPUG00000004043 ADGRD1 (ENSMPUG00000004021) #23 Canidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Canis_lupus ANCESTRAL SPECIES 25 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Dog DUPLICATION Dog MODERN SPECIES 28 ENSCAFG00845024616 ENSCAFG00845024497 ENSCAFG00845024411 RNF39 (ENSCAFG00845024143) PPP1R11 (ENSCAFG00845019663) ENSCAFG00845019593 ENSCAFG00845019557 ENSCAFG00845019531 MOG (ENSCAFG00845019151) GABBR1 (ENSCAFG00845018375) OR10C1 (ENSCAFG00845018070) OR14J1 (ENSCAFG00845018046) OR2W1 (ENSCAFG00845018013) ENSCAFG00845017982 #22 OR2AD2 (ENSCAFG00845017963) ZNF311 (ENSCAFG00845017875) ENSCAFG00845017947 ENSCAFG00845017842 TRIM27 (ENSCAFG00845017678) ENSCAFG00845017573 ENSCAFG00845017547 SCAND3 (ENSCAFG00845017503) GPX5 (ENSCAFG00845017417) GPX6 (ENSCAFG00845017348) ZSCAN23 (ENSCAFG00845017199) ZSCAN12 (ENSCAFG00845017024) ENSCAFG00845016993 ZSCAN31 (ENSCAFG00845016938) PGBD1 (ENSCAFG00845016891) Dog MODERN SPECIES 18 ENSCAFG00845015591 ENSCAFG00845030599 DHX37 (ENSCAFG00845030575) #8 BRI3BP (ENSCAFG00845030556) #9 ENSCAFG00845030534 TMEM132B (ENSCAFG00845030459) #11 ENSCAFG00845030391 TMEM132C (ENSCAFG00845030310) #14 SLC15A4 (ENSCAFG00845030274) #15 GLT1D1 (ENSCAFG00845030197) #16 TMEM132D (ENSCAFG00845030146) #17 FZD10 (ENSCAFG00845030138) #18 PIWIL1 (ENSCAFG00845030071) #19 RIMBP2 (ENSCAFG00845029818) #20 STX2 (ENSCAFG00845029672) #21 RAN (ENSCAFG00845029617) #22 ADGRD1 (ENSCAFG00845029309) #23 SFSWAP (ENSCAFG00845029019) #25 MMP17 (ENSCAFG00845028950) #26 EP400 (ENSCAFG00845028856) #27 PUS1 (ENSCAFG00845028826) #28 EP400 (ENSCAFG00845028224) #29 DDX51 (ENSCAFG00845027915) #30 NOC4L (ENSCAFG00845027775) #31 GALNT9 (ENSCAFG00845027659) #32 FBRSL1 (ENSCAFG00845027352) #33 ENSCAFG00845027139 #34 P2RX2 (ENSCAFG00845026792) #35 POLE (ENSCAFG00845026128) #36 ENSCAFG00845026012 PGAM5 (ENSCAFG00845025899) Dingo DUPLICATION Dingo MODERN SPECIES 105 ENSCAFG00020003250 TRIM26 (ENSCAFG00020003237) TRIM10 (ENSCAFG00020003231) RNF39 (ENSCAFG00020003226) PPP1R11 (ENSCAFG00020003217) ENSCAFG00020003212 ENSCAFG00020003209 ENSCAFG00020003206 MOG (ENSCAFG00020003167) GABBR1 (ENSCAFG00020003153) OR10C1 (ENSCAFG00020003151) OR14J1 (ENSCAFG00020003149) OR2W1 (ENSCAFG00020003146) ENSCAFG00020003142 #22 ENSCAFG00020003139 ENSCAFG00020003136 TRIM27 (ENSCAFG00020003116) ENSCAFG00020003111 SCAND3 (ENSCAFG00020003107) ENSCAFG00020003096 GPX6 (ENSCAFG00020003059) ZSCAN23 (ENSCAFG00020003049) ZSCAN12 (ENSCAFG00020003048) ENSCAFG00020003005 ZSCAN31 (ENSCAFG00020002994) ENSCAFG00020002984 ENSCAFG00020002972 ZSCAN26 (ENSCAFG00020002978) NKAPL (ENSCAFG00020002968) Dingo MODERN SPECIES 373 ZBTB48 (ENSCAFG00020008318) KLHL21 (ENSCAFG00020008304) ENSCAFG00020008301 THAP3 (ENSCAFG00020008295) DNAJC11 (ENSCAFG00020008281) ENSCAFG00020008278 CAMTA1 (ENSCAFG00020008229) ENSCAFG00020008201 PER3 (ENSCAFG00020008154) UTS2 (ENSCAFG00020008124) ENSCAFG00020008121 PARK7 (ENSCAFG00020008120) ERRFI1 (ENSCAFG00020008116) SLC45A1 (ENSCAFG00020008105) RERE (ENSCAFG00020007645) ENSCAFG00020007591 #22 ENSCAFG00020007143 CA6 (ENSCAFG00020007093) SLC2A5 (ENSCAFG00020007081) GPR157 (ENSCAFG00020007076) H6PD (ENSCAFG00020007057) SLC25A33 (ENSCAFG00020007040) TMEM201 (ENSCAFG00020007033) PIK3CD (ENSCAFG00020007028) CLSTN1 (ENSCAFG00020006476) CTNNBIP1 (ENSCAFG00020006431) ENSCAFG00020006426 NMNAT1 (ENSCAFG00020006423) RBP7 (ENSCAFG00020006415) UBE4B (ENSCAFG00020006178) ENSCAFG00020006108 Felidae ANCESTRAL SPECIES 20 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00950000182803.B.d.a.j ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.`b.a #29 ENSGT00940000154764.ab #29 ENSGT00940000154764.`b.b #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Panthera ANCESTRAL SPECIES 28 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00950000182803.B.d.a.j ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 Tiger MODERN SPECIES 314 SLC15A4 (ENSPTIG00000000924) #15 GLT1D1 (ENSPTIG00000002167) #16 ENSPTIG00000004709 #17 FZD10 (ENSPTIG00000000186) #18 PIWIL1 (ENSPTIG00000005342) #19 STX2 (ENSPTIG00000005736) #21 ENSPTIG00000007659 #22 ADGRD1 (ENSPTIG00000008172) #23 Panthera_a ANCESTRAL SPECIES 30 ENSGT00940000163680.y.b.a ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00950000182803.B.d.a.j ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 leopard MODERN SPECIES 158 TMEM132C (ENSPPRG00000000540) #14 SLC15A4 (ENSPPRG00000000573) #15 GLT1D1 (ENSPPRG00000000963) #16 TMEM132D (ENSPPRG00000001387) #17 PIWIL1 (ENSPPRG00000001911) #19 RIMBP2 (ENSPPRG00000002377) #20 STX2 (ENSPPRG00000002969) #21 ENSPPRG00000003709 #22 ENSPPRG00000003822 #23 Artiodactyla ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Cetacea ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000161022.g ENSGT00390000008815 ENSGT00390000012691.c.b ENSGT00940000161798 ENSGT00390000007075 ENSGT00390000010512 ENSGT00940000161403 ENSGT00940000159200 ENSGT00940000160991 ENSGT00390000009448 ENSGT00920000150736 ENSGT00940000161735 ENSGT00950000183180.a.b ENSGT00390000017030.b.b ENSGT00940000158438 ENSGT00940000153786.e.a.b #22 ENSGT00940000162408 ENSGT01090000260100.A ENSGT00390000006663 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 ENSGT00390000000489 ENSGT01030000234648.a.b.a.a.a ENSGT00730000111329 ENSGT00410000025882.b.i.a ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.a.b ENSGT00950000182973.a.c.a Sperm whale MODERN SPECIES 9 TAP1 (ENSPCTG00005021480) PSMB9 (ENSPCTG00005008969) HLA-DMB (ENSPCTG00005009080) ENSPCTG00005009114 HLA-DOA (ENSPCTG00005009319) COL11A2 (ENSPCTG00005009478) RXRB (ENSPCTG00005011572) SLC39A7 (ENSPCTG00005011775) HSD17B8 (ENSPCTG00005011876) RING1 (ENSPCTG00005011923) ENSPCTG00005011963 KIFC1 (ENSPCTG00005012002) PHF1 (ENSPCTG00005012052) CUTA (ENSPCTG00005012115) SYNGAP1 (ENSPCTG00005012336) ENSPCTG00005014008 #22 ZBTB9 (ENSPCTG00005014057) BAK1 (ENSPCTG00005014079) ENSPCTG00005014198 ITPR3 (ENSPCTG00005014292) UQCC2 (ENSPCTG00005015018) ENSPCTG00005015136 MLN (ENSPCTG00005015154) ENSPCTG00005015351 ENSPCTG00005015388 HMGA1 (ENSPCTG00005015441) SMIM29 (ENSPCTG00005015565) NUDT3 (ENSPCTG00005015647) RPS10 (ENSPCTG00005015685) PACSIN1 (ENSPCTG00005015775) SPDEF (ENSPCTG00005015978) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000161022.g ENSGT00390000008815 ENSGT00390000012691.c.b ENSGT00940000161798 ENSGT00390000007075 ENSGT00390000010512 ENSGT00940000161403 ENSGT00940000159200 ENSGT00940000160991 ENSGT00390000009448 ENSGT00920000150736 ENSGT00940000161735 ENSGT00950000183180.a.b ENSGT00390000017030.b.b ENSGT00940000158438 ENSGT00940000153786.e.a.b #22 ENSGT00940000162408 ENSGT01090000260100.A ENSGT00390000006663 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 ENSGT00390000000489 ENSGT01030000234648.a.b.a.a.a ENSGT00730000111329 ENSGT00410000025882.b.i.a ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.a.b ENSGT00950000182973.a.c.a Odontoceti_b ANCESTRAL SPECIES 10 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00390000004786.i.a ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Vaquita MODERN SPECIES 5 RFLNA (ENSPSNG00000014554) NCOR2 (ENSPSNG00000014709) SCARB1 (ENSPSNG00000014961) DHX37 (ENSPSNG00000015708) #8 BRI3BP (ENSPSNG00000015784) #9 AACS (ENSPSNG00000015851) #10 TMEM132B (ENSPSNG00000015964) #11 TMEM132C (ENSPSNG00000016234) #14 SLC15A4 (ENSPSNG00000016375) #15 GLT1D1 (ENSPSNG00000009681) #16 TMEM132D (ENSPSNG00000009746) #17 ENSPSNG00000009855 PIWIL1 (ENSPSNG00000010087) #19 RIMBP2 (ENSPSNG00000010393) #20 STX2 (ENSPSNG00000010842) #21 ENSPSNG00000011083 #22 ADGRD1 (ENSPSNG00000011202) #23 ENSPSNG00000011478 SFSWAP (ENSPSNG00000011541) #25 MMP17 (ENSPSNG00000011655) #26 ULK1 (ENSPSNG00000011844) #27 PUS1 (ENSPSNG00000011984) #28 EP400 (ENSPSNG00000012268) #29 ENSPSNG00000014713 #30 NOC4L (ENSPSNG00000014776) #31 GALNT9 (ENSPSNG00000014862) #32 ENSPSNG00000015052 #33 ENSPSNG00000015131 #33 ENSPSNG00000015158 #34 P2RX2 (ENSPSNG00000015241) #35 POLE (ENSPSNG00000015590) #36 Monodontidae DUPLICATION Monodontidae DUPLICATION Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000154788.ib.b.b.a ENSGT00940000157772 ENSGT00530000064170.e ENSGT00390000007535.b.a ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.b.a.a.h ENSGT00940000155007 ENSGT00940000155244 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 ENSGT00940000153786.e.a.b.e.a #22 ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00390000006051.a.b.a.a.h ENSGT00940000158028 ENSGT00390000008092.a.k.a ENSGT00940000154046.b ENSGT00390000002416 ENSGT00940000161008 ENSGT00390000000945 ENSGT00390000000860.b ENSGT00940000156436 ENSGT00390000001413.c ENSGT00940000158864 Narwhal MODERN SPECIES 312 ACO1 (ENSMMNG00015020219) TOPORS (ENSMMNG00015020111) SMIM27 (ENSMMNG00015020089) ENSMMNG00015020067 ENSMMNG00015020043 TMEM215 (ENSMMNG00015020032) APTX (ENSMMNG00015019891) ENSMMNG00015019827 SMU1 (ENSMMNG00015019783) B4GALT1 (ENSMMNG00015019757) ENSMMNG00015019735 BAG1 (ENSMMNG00015019712) CHMP5 (ENSMMNG00015019686) NFX1 (ENSMMNG00015019641) ENSMMNG00015019525 ENSMMNG00015019480 #22 AQP3 (ENSMMNG00015019451) NOL6 (ENSMMNG00015019353) UBE2R2 (ENSMMNG00015019308) UBAP2 (ENSMMNG00015019218) ENSMMNG00015019187 DCAF12 (ENSMMNG00015019152) ENSMMNG00015019055 KIF24 (ENSMMNG00015018952) NUDT2 (ENSMMNG00015018921) MYORG (ENSMMNG00015018908) C9orf24 (ENSMMNG00015018846) FAM219A (ENSMMNG00015018769) DNAI1 (ENSMMNG00015018633) ENSMMNG00015018615 CNTFR (ENSMMNG00015018571) Beluga whale MODERN SPECIES 50 ENSDLEG00000020841 ACO1 (ENSDLEG00000020847) TOPORS (ENSDLEG00000020871) NDUFB6 (ENSDLEG00000020877) TMEM215 (ENSDLEG00000020888) APTX (ENSDLEG00000020896) DNAJA1 (ENSDLEG00000020908) SMU1 (ENSDLEG00000020915) B4GALT1 (ENSDLEG00000020924) BAG1 (ENSDLEG00000020931) CHMP5 (ENSDLEG00000020937) NFX1 (ENSDLEG00000020947) ENSDLEG00000020955 ENSDLEG00000020958 TFCP2 (ENSDLEG00000020960) ENSDLEG00000007746 #22 AQP3 (ENSDLEG00000007754) NOL6 (ENSDLEG00000007758) UBE2R2 (ENSDLEG00000007766) UBAP2 (ENSDLEG00000007780) ENSDLEG00000007831 DCAF12 (ENSDLEG00000007833) ENSDLEG00000007836 KIF24 (ENSDLEG00000007842) NUDT2 (ENSDLEG00000007863) MYORG (ENSDLEG00000007868) C9orf24 (ENSDLEG00000007872) FAM219A (ENSDLEG00000007874) DNAI1 (ENSDLEG00000007879) ENHO (ENSDLEG00000007905) CNTFR (ENSDLEG00000007948) Monodontidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.e.b #22 Beluga whale MODERN SPECIES 60 ZNF664 (ENSDLEG00000015135) RFLNA (ENSDLEG00000015172) NCOR2 (ENSDLEG00000015201) SCARB1 (ENSDLEG00000015328) DHX37 (ENSDLEG00000015477) #8 BRI3BP (ENSDLEG00000015566) #9 AACS (ENSDLEG00000015571) #10 TMEM132B (ENSDLEG00000015585) #11 TMEM132C (ENSDLEG00000015604) #14 SLC15A4 (ENSDLEG00000015619) #15 GLT1D1 (ENSDLEG00000015656) #16 TMEM132D (ENSDLEG00000015697) #17 FZD10 (ENSDLEG00000015723) #18 PIWIL1 (ENSDLEG00000015759) #19 RIMBP2 (ENSDLEG00000015986) #20 ENSDLEG00000016133 #22 STX2 (ENSDLEG00000016149) #21 ADGRD1 (ENSDLEG00000016189) #23 ENSDLEG00000016272 RAB5IF (ENSDLEG00000016281) SFSWAP (ENSDLEG00000016317) #25 MMP17 (ENSDLEG00000016346) #26 ULK1 (ENSDLEG00000016379) #27 PUS1 (ENSDLEG00000016462) #28 EP400 (ENSDLEG00000016570) #29 DDX51 (ENSDLEG00000018234) #30 NOC4L (ENSDLEG00000018256) #31 GALNT9 (ENSDLEG00000018295) #32 FBRSL1 (ENSDLEG00000018422) #33 ENSDLEG00000018488 #34 P2RX2 (ENSDLEG00000018511) #35 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000161022.g ENSGT00390000008815 ENSGT00390000012691.c.b ENSGT00940000161798 ENSGT00390000007075 ENSGT00390000010512 ENSGT00940000161403 ENSGT00940000159200 ENSGT00940000160991 ENSGT00390000009448 ENSGT00920000150736 ENSGT00940000161735 ENSGT00950000183180.a.b ENSGT00390000017030.b.b ENSGT00940000158438 ENSGT00940000153786.e.a.b.f #22 ENSGT00940000162408 ENSGT01090000260100.A ENSGT00390000006663 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 ENSGT00390000000489 ENSGT01030000234648.a.b.a.a.a ENSGT00730000111329 ENSGT00410000025882.b.i.a ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 Narwhal MODERN SPECIES 310 HSD17B8 (ENSMMNG00015012658) ENSMMNG00015012638 VPS52 (ENSMMNG00015012607) ENSMMNG00015012591 B3GALT4 (ENSMMNG00015012584) WDR46 (ENSMMNG00015012564) PFDN6 (ENSMMNG00015012541) RGL2 (ENSMMNG00015012522) TAPBP (ENSMMNG00015012480) ZBTB22 (ENSMMNG00015012464) DAXX (ENSMMNG00015012453) KIFC1 (ENSMMNG00015012412) PHF1 (ENSMMNG00015012349) CUTA (ENSMMNG00015012280) SYNGAP1 (ENSMMNG00015012086) ENSMMNG00015012030 #22 ZBTB9 (ENSMMNG00015012021) BAK1 (ENSMMNG00015012006) ENSMMNG00015011979 ENSMMNG00015011970 ITPR3 (ENSMMNG00015011896) UQCC2 (ENSMMNG00015011853) IP6K3 (ENSMMNG00015011838) LEMD2 (ENSMMNG00015011822) MLN (ENSMMNG00015011804) GRM4 (ENSMMNG00015011724) ENSMMNG00015011685 ENSMMNG00015011673 ENSMMNG00015011658 PACSIN1 (ENSMMNG00015011632) SPDEF (ENSMMNG00015011601) Beluga whale MODERN SPECIES 8 VPS52 (ENSDLEG00000008948) RPS18 (ENSDLEG00000009077) B3GALT4 (ENSDLEG00000009097) WDR46 (ENSDLEG00000009126) PFDN6 (ENSDLEG00000009394) RGL2 (ENSDLEG00000009432) ENSDLEG00000009529 TAPBP (ENSDLEG00000009539) ZBTB22 (ENSDLEG00000009549) DAXX (ENSDLEG00000009561) SMIM40 (ENSDLEG00000009639) KIFC1 (ENSDLEG00000009649) PHF1 (ENSDLEG00000009666) CUTA (ENSDLEG00000009700) SYNGAP1 (ENSDLEG00000009904) ENSDLEG00000012321 #22 ZBTB9 (ENSDLEG00000012333) BAK1 (ENSDLEG00000012340) ENSDLEG00000012378 ITPR3 (ENSDLEG00000012814) ENSDLEG00000020037 UQCC2 (ENSDLEG00000020040) IP6K3 (ENSDLEG00000020042) LEMD2 (ENSDLEG00000020047) ENSDLEG00000020050 ENSDLEG00000020053 GRM4 (ENSDLEG00000020058) HMGA1 (ENSDLEG00000020082) ENSDLEG00000020091 NUDT3 (ENSDLEG00000020096) RPS10 (ENSDLEG00000020098) Pecora DUPLICATION Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.a #22 Yarkand deer MODERN SPECIES 27 CNTNAP4 (ENSCHYG00000015694) ENSCHYG00000016659 ENSCHYG00000000033 MON1B (ENSCHYG00000000055) SYCE1L (ENSCHYG00000000076) ADAMTS18 (ENSCHYG00000000109) ENSCHYG00000000127 ENSCHYG00000000143 NUDT7 (ENSCHYG00000000156) VAT1L (ENSCHYG00000000176) CLEC3A (ENSCHYG00000000192) WWOX (ENSCHYG00000000219) MAF (ENSCHYG00000000268) DYNLRB2 (ENSCHYG00000000287) CDYL2 (ENSCHYG00000000319) ENSCHYG00000000338 #22 ENSCHYG00000000345 ENSCHYG00000000359 ENSCHYG00000000384 ENSCHYG00000000403 ATMIN (ENSCHYG00000000420) C16orf46 (ENSCHYG00000000440) ENSCHYG00000000480 ENSCHYG00000000496 ENSCHYG00000000525 BCO1 (ENSCHYG00000000591) GAN (ENSCHYG00000000629) CMIP (ENSCHYG00000000697) PLCG2 (ENSCHYG00000000839) SDR42E1 (ENSCHYG00000000977) HSD17B2 (ENSCHYG00000000993) Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.a #22 Caprinae ANCESTRAL SPECIES 17 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b.g.a.a #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00730000111146.eb ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Rambouillet Sheep MODERN SPECIES 8 AACS (ENSOARG00020003505) #10 ENSOARG00020003452 ENSOARG00020003425 ENSOARG00020003404 ENSOARG00020003380 TMEM132B (ENSOARG00020003356) #11 ENSOARG00020003285 TMEM132C (ENSOARG00020024433) #14 SLC15A4 (ENSOARG00020024372) #15 GLT1D1 (ENSOARG00020024341) #16 TMEM132D (ENSOARG00020024313) #17 FZD10 (ENSOARG00020024300) #18 PIWIL1 (ENSOARG00020024250) #19 RIMBP2 (ENSOARG00020024066) #20 STX2 (ENSOARG00020024009) #21 RAN (ENSOARG00020023992) #22 ADGRD1 (ENSOARG00020023653) #23 SFSWAP (ENSOARG00020023335) #25 MMP17 (ENSOARG00020023242) #26 ULK1 (ENSOARG00020023205) #27 PUS1 (ENSOARG00020023152) #28 EP400 (ENSOARG00020023106) #29 ENSOARG00020023061 DDX51 (ENSOARG00020022927) #30 NOC4L (ENSOARG00020022819) #31 GALNT9 (ENSOARG00020022708) #32 ENSOARG00020022546 #34 P2RX2 (ENSOARG00020022417) #35 POLE (ENSOARG00020021578) #36 ENSOARG00020021521 PXMP2 (ENSOARG00020021495) #37 Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.b #22 Yarkand deer MODERN SPECIES 17 DNAJC21 (ENSCHYG00000025625) BRIX1 (ENSCHYG00000025666) RAD1 (ENSCHYG00000025713) TTC23L (ENSCHYG00000025741) RAI14 (ENSCHYG00000025856) ENSCHYG00000026049 C1QTNF3 (ENSCHYG00000026055) ENSCHYG00000026092 ENSCHYG00000026145 RXFP3 (ENSCHYG00000026153) ADAMTS12 (ENSCHYG00000026173) ENSCHYG00000026193 TARS1 (ENSCHYG00000026205) NPR3 (ENSCHYG00000026248) SUB1 (ENSCHYG00000026272) ENSCHYG00000026296 #22 ENSCHYG00000026302 ZFR (ENSCHYG00000026320) ENSCHYG00000026360 MTMR12 (ENSCHYG00000026367) GOLPH3 (ENSCHYG00000026387) PDZD2 (ENSCHYG00000026413) C5orf22 (ENSCHYG00000026494) DROSHA (ENSCHYG00000026525) CDH6 (ENSCHYG00000026571) ENSCHYG00000026587 ENSCHYG00000026591 CDH9 (ENSCHYG00000026605) ENSCHYG00000026607 ENSCHYG00000026612 CDH10 (ENSCHYG00000026619) Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.b #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.b #22 Bovinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.b #22 Bos ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.a.b #22 Bos_b ANCESTRAL SPECIES 13 ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00390000000703.h.wb.a.a.a ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b.g.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00950000185329 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Hybrid Bos Indicus MODERN SPECIES 8 AACS (ENSBIXG00005017021) #10 TMEM132B (ENSBIXG00005002749) #11 ENSBIXG00005005590 ENSBIXG00005016880 TMEM132C (ENSBIXG00005007554) #14 ENSBIXG00005016848 SLC15A4 (ENSBIXG00005005508) #15 GLT1D1 (ENSBIXG00005016747) #16 TMEM132D (ENSBIXG00005016628) #17 ENSBIXG00005016601 FZD10 (ENSBIXG00005016588) #18 PIWIL1 (ENSBIXG00005016568) #19 RIMBP2 (ENSBIXG00005002663) #20 ENSBIXG00005016432 STX2 (ENSBIXG00005016420) #21 ENSBIXG00005016370 #22 ADGRD1 (ENSBIXG00005016329) #23 SFSWAP (ENSBIXG00005016190) #25 MMP17 (ENSBIXG00005016111) #26 ULK1 (ENSBIXG00005006510) #27 PUS1 (ENSBIXG00005016019) #28 EP400 (ENSBIXG00005015993) #29 ENSBIXG00005002451 DDX51 (ENSBIXG00005005981) #30 NOC4L (ENSBIXG00005015575) #31 GALNT9 (ENSBIXG00005015554) #32 FBRSL1 (ENSBIXG00005015510) #33 ENSBIXG00005015486 #34 P2RX2 (ENSBIXG00005015466) #35 POLE (ENSBIXG00005015397) #36 ENSBIXG00005015053 #37 Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.b #22 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 22 TMTC2 (ENSCHYG00000021769) METTL25 (ENSCHYG00000021623) CCDC59 (ENSCHYG00000021567) ENSCHYG00000021532 PPFIA2 (ENSCHYG00000018601) ACSS3 (ENSCHYG00000018161) LIN7A (ENSCHYG00000018063) MYF5 (ENSCHYG00000018006) MYF6 (ENSCHYG00000017934) PTPRQ (ENSCHYG00000015685) OTOGL (ENSCHYG00000013254) PPP1R12A (ENSCHYG00000011940) ENSCHYG00000011841 PAWR (ENSCHYG00000011616) SYT1 (ENSCHYG00000011518) ENSCHYG00000011512 #22 NAV3 (ENSCHYG00000010069) ENSCHYG00000009932 E2F7 (ENSCHYG00000009596) ENSCHYG00000009520 CSRP2 (ENSCHYG00000009422) ZDHHC17 (ENSCHYG00000009052) OSBPL8 (ENSCHYG00000008637) ENSCHYG00000008327 PHLDA1 (ENSCHYG00000008287) KRR1 (ENSCHYG00000008210) GLIPR1 (ENSCHYG00000008170) GLIPR1L2 (ENSCHYG00000008064) GLIPR1L1 (ENSCHYG00000008035) CAPS2 (ENSCHYG00000007943) KCNC2 (ENSCHYG00000007653) Yarkand deer MODERN SPECIES 13 TRIM55 (ENSCHYG00000026648) CRH (ENSCHYG00000004995) RRS1 (ENSCHYG00000005030) ADHFE1 (ENSCHYG00000005078) VXN (ENSCHYG00000005149) MYBL1 (ENSCHYG00000005228) VCPIP1 (ENSCHYG00000005426) SGK3 (ENSCHYG00000005457) MCMDC2 (ENSCHYG00000005499) ENSCHYG00000005535 TCF24 (ENSCHYG00000005561) PPP1R42 (ENSCHYG00000005574) COPS5 (ENSCHYG00000005626) CSPP1 (ENSCHYG00000005729) ARFGEF1 (ENSCHYG00000006205) ENSCHYG00000006521 #22 CPA6 (ENSCHYG00000006530) PREX2 (ENSCHYG00000006634) C8orf34 (ENSCHYG00000007181) ENSCHYG00000007240 SULF1 (ENSCHYG00000007268) SLCO5A1 (ENSCHYG00000007392) ENSCHYG00000007438 ENSCHYG00000007448 PRDM14 (ENSCHYG00000007464) NCOA2 (ENSCHYG00000007506) ENSCHYG00000007723 TRAM1 (ENSCHYG00000007766) LACTB2 (ENSCHYG00000007833) ENSCHYG00000007862 XKR9 (ENSCHYG00000007891) Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.b #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.b #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.g.b #22 Rambouillet Sheep MODERN SPECIES 6 ENSOARG00020005412 DGAT2 (ENSOARG00020005462) UVRAG (ENSOARG00020005557) ENSOARG00020005653 ENSOARG00020005727 WNT11 (ENSOARG00020006304) THAP12 (ENSOARG00020006375) EMSY (ENSOARG00020006533) LRRC32 (ENSOARG00020007119) ENSOARG00020007148 ENSOARG00020007184 TSKU (ENSOARG00020007221) ACER3 (ENSOARG00020007254) CAPN5 (ENSOARG00020007502) MYO7A (ENSOARG00020007565) ENSOARG00020007670 #22 ENSOARG00020007682 ENSOARG00020007871 ANO3 (ENSOARG00020007896) MUC15 (ENSOARG00020008218) SLC5A12 (ENSOARG00020008429) FIBIN (ENSOARG00020009250) BBOX1 (ENSOARG00020009280) ENSOARG00020009346 CCDC34 (ENSOARG00020009403) LGR4 (ENSOARG00020009461) LIN7C (ENSOARG00020010086) BDNF (ENSOARG00020010275) KIF18A (ENSOARG00020010335) METTL15 (ENSOARG00020010450) KCNA4 (ENSOARG00020010639) Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.h #22 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.h #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.h #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.b.h #22 Goat MODERN SPECIES 1 ARMH4 (ENSCHIG00000011182) ACTR10 (ENSCHIG00000025582) PSMA3 (ENSCHIG00000016692) ARID4A (ENSCHIG00000021589) TOMM20L (ENSCHIG00000023817) TIMM9 (ENSCHIG00000020353) KIAA0586 (ENSCHIG00000022943) DACT1 (ENSCHIG00000020832) ENSCHIG00000003466 DAAM1 (ENSCHIG00000000665) GPR135 (ENSCHIG00000014842) L3HYPDH (ENSCHIG00000019611) JKAMP (ENSCHIG00000021867) CCDC175 (ENSCHIG00000022114) ENSCHIG00000016341 ENSCHIG00000000816 #22 ENSCHIG00000003392 LRRC9 (ENSCHIG00000025206) PCNX4 (ENSCHIG00000027192) DHRS7 (ENSCHIG00000026336) ENSCHIG00000006564 ENSCHIG00000022625 SIX6 (ENSCHIG00000017541) SIX1 (ENSCHIG00000024896) SIX4 (ENSCHIG00000012309) ENSCHIG00000022102 MNAT1 (ENSCHIG00000021930) TRMT5 (ENSCHIG00000018801) SLC38A6 (ENSCHIG00000020159) TMEM30B (ENSCHIG00000009225) PRKCH (ENSCHIG00000016844) Rambouillet Sheep MODERN SPECIES 23 PSMA3 (ENSOARG00020020746) ARID4A (ENSOARG00020020842) TOMM20L (ENSOARG00020021304) TIMM9 (ENSOARG00020007740) DACT1 (ENSOARG00020008146) ENSOARG00020008208 ENSOARG00020008239 ENSOARG00020008270 ENSOARG00020008316 ENSOARG00020008342 DAAM1 (ENSOARG00020008441) L3HYPDH (ENSOARG00020008883) JKAMP (ENSOARG00020008977) CCDC175 (ENSOARG00020009081) RTN1 (ENSOARG00020009209) ENSOARG00020009459 #22 LRRC9 (ENSOARG00020009484) PCNX4 (ENSOARG00020009627) DHRS7 (ENSOARG00020009716) ENSOARG00020009767 ENSOARG00020009798 C14orf39 (ENSOARG00020009961) SIX6 (ENSOARG00020010325) SIX1 (ENSOARG00020010359) SIX4 (ENSOARG00020010405) MNAT1 (ENSOARG00020010470) ENSOARG00020010525 TRMT5 (ENSOARG00020010606) SLC38A6 (ENSOARG00020010682) TMEM30B (ENSOARG00020010869) PRKCH (ENSOARG00020010910) Siberian musk deer MODERN SPECIES 500 ENSMMSG00000005248 #22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153786.e.a.b #22 Armadillo MODERN SPECIES 1898 AKR1D1 (ENSDNOG00000016894) ENSDNOG00000032667 ENSDNOG00000047513 #22 ENSDNOG00000006533 ENSDNOG00000034028 SVOPL (ENSDNOG00000006558) ATP6V0A4 (ENSDNOG00000019370) TMEM213 (ENSDNOG00000033739) ENSDNOG00000001967 ZC3HAV1L (ENSDNOG00000039619) ZC3HAV1 (ENSDNOG00000043117) TTC26 (ENSDNOG00000006911) UBN2 (ENSDNOG00000011295) Eutheria ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Naked mole-rat female MODERN SPECIES 25 FGFR1 (ENSHGLG00000009134) ENSHGLG00000041590 TACC1 (ENSHGLG00000007450) PLEKHA2 (ENSHGLG00000041628) HTRA4 (ENSHGLG00000006390) TM2D2 (ENSHGLG00000040778) ENSHGLG00000005367 ENSHGLG00000041202 ENSHGLG00000048335 ENSHGLG00000004079 ENSHGLG00000007788 ENSHGLG00000032725 IDO1 (ENSHGLG00000003174) IDO2 (ENSHGLG00000002830) ENSHGLG00000049168 ENSHGLG00000004193 ##22 TCIM (ENSHGLG00000047130) ENSHGLG00000034332 ENSHGLG00000003519 ENSHGLG00000049581 ENSHGLG00000003246 SFRP1 (ENSHGLG00000048334) ENSHGLG00000002990 GOLGA7 (ENSHGLG00000035035) GINS4 (ENSHGLG00000038877) AGPAT6 (ENSHGLG00000049078) NKX6-3 (ENSHGLG00000009779) ANK1 (ENSHGLG00000003086) KAT6A (ENSHGLG00000003976) ENSHGLG00000046201 AP3M2 (ENSHGLG00000003868) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Long-tailed chinchilla MODERN SPECIES 187 LGI2 (ENSCLAG00000001203) CCDC149 (ENSCLAG00000000982) ENSCLAG00000017465 ##22 DHX15 (ENSCLAG00000000508) PPARGC1A (ENSCLAG00000002058) GBA3 (ENSCLAG00000002378) ADGRA3 (ENSCLAG00000001094) KCNIP4 (ENSCLAG00000001455) PACRGL (ENSCLAG00000001007) SLIT2 (ENSCLAG00000001413) ENSCLAG00000002042 LCORL (ENSCLAG00000002297) NCAPG (ENSCLAG00000000689) FAM184B (ENSCLAG00000000877) MED28 (ENSCLAG00000000626) LAP3 (ENSCLAG00000000942) CLRN2 (ENSCLAG00000001024) QDPR (ENSCLAG00000000873) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 273 ENSODEG00000001662 ##22 BCOR (ENSODEG00000001651) ENSODEG00000001626 ENSODEG00000001615 CXorf38 (ENSODEG00000001590) MED14 (ENSODEG00000001567) ENSODEG00000001539 ENSODEG00000001529 ENSODEG00000001518 ENSODEG00000018682 USP9X (ENSODEG00000001431) ENSODEG00000001355 NYX (ENSODEG00000001332) GPR34 (ENSODEG00000018828) GPR82 (ENSODEG00000002230) CASK (ENSODEG00000002069) Degu MODERN SPECIES 204 TMEM222 (ENSODEG00000003675) WDTC1 (ENSODEG00000003804) ENSODEG00000003743 SLC9A1 (ENSODEG00000003659) TENT5B (ENSODEG00000003616) TRNP1 (ENSODEG00000003604) ENSODEG00000003581 ENSODEG00000003339 NR0B2 (ENSODEG00000003311) GPATCH3 (ENSODEG00000003292) GPN2 (ENSODEG00000003267) ENSODEG00000018988 ZDHHC18 (ENSODEG00000003193) PIGV (ENSODEG00000005864) ARID1A (ENSODEG00000005639) ENSODEG00000005573 ##22 RPS6KA1 (ENSODEG00000005545) ENSODEG00000019074 ENSODEG00000004366 DHDDS (ENSODEG00000004324) ENSODEG00000004283 ENSODEG00000004272 ENSODEG00000004203 UBXN11 (ENSODEG00000004163) ENSODEG00000004141 CEP85 (ENSODEG00000004089) ENSODEG00000019012 CNKSR1 (ENSODEG00000004045) ZNF593OS (ENSODEG00000003889) ZNF593 (ENSODEG00000003869) C1orf232 (ENSODEG00000003718) Degu MODERN SPECIES 111 RIN3 (ENSODEG00000010091) SLC24A4 (ENSODEG00000008367) CPSF2 (ENSODEG00000008682) ENSODEG00000019811 ENSODEG00000010647 ENSODEG00000009488 SERPINA1 (ENSODEG00000010255) SERPINA11 (ENSODEG00000010365) SERPINA9 (ENSODEG00000011197) SERPINA12 (ENSODEG00000011336) SERPINA5 (ENSODEG00000010880) SERPINA3 (ENSODEG00000009064) GSC (ENSODEG00000008722) DICER1 (ENSODEG00000008594) CLMN (ENSODEG00000008945) ENSODEG00000009806 ##22 SYNE3 (ENSODEG00000008940) GLRX5 (ENSODEG00000009514) TUNAR (ENSODEG00000010137) C14orf132 (ENSODEG00000010554) BDKRB2 (ENSODEG00000009649) ATG2B (ENSODEG00000009264) GSKIP (ENSODEG00000009814) AK7 (ENSODEG00000010695) ENSODEG00000010020 ENSODEG00000009241 ENSODEG00000019809 ENSODEG00000020124 ENSODEG00000013092 BCL11B (ENSODEG00000012597) ENSODEG00000012193 Rodentia_B ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Kangaroo rat MODERN SPECIES 382 Dnaaf10 (ENSDORG00000006862) C1d (ENSDORG00000003300) Meis1 (ENSDORG00000008334) Spred2 (ENSDORG00000012174) Actr2 (ENSDORG00000001487) ENSDORG00000028628 Cep68 (ENSDORG00000002111) Slc1a4 (ENSDORG00000002394) Sertad2 (ENSDORG00000025954) ENSDORG00000027058 ENSDORG00000004159 ENSDORG00000027919 Peli1 (ENSDORG00000025404) Vps54 (ENSDORG00000009782) Ugp2 (ENSDORG00000013164) Rasl2-9 (ENSDORG00000027038) ##22 Mdh1 (ENSDORG00000000099) ENSDORG00000009021 Wdpcp (ENSDORG00000003329) Otx1 (ENSDORG00000024553) ENSDORG00000023858 Ehbp1 (ENSDORG00000002628) Tmem17 (ENSDORG00000024954) B3gnt2 (ENSDORG00000024683) ENSDORG00000027292 Commd1 (ENSDORG00000001166) Cct4 (ENSDORG00000002542) ENSDORG00000026102 Xpo1 (ENSDORG00000013050) Usp34 (ENSDORG00000012062) Ahsa2 (ENSDORG00000012061) Myomorpha ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Muroidea_A ANCESTRAL SPECIES 3 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Murinae ANCESTRAL SPECIES 2 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Mus ANCESTRAL SPECIES 3 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Shrew mouse MODERN SPECIES 14 Cnr1 (MGP_PahariEiJ_G0023999) Spaca1 (MGP_PahariEiJ_G0024000) Akirin2 (MGP_PahariEiJ_G0024001) Orc3 (MGP_PahariEiJ_G0024002) Rars2 (MGP_PahariEiJ_G0024003) Slc35a1 (MGP_PahariEiJ_G0024004) MGP_PahariEiJ_G0024005 Gm136 (MGP_PahariEiJ_G0024006) Smim8 (MGP_PahariEiJ_G0024007) Zfp292 (MGP_PahariEiJ_G0024008) Cga (MGP_PahariEiJ_G0024009) Mob3b (MGP_PahariEiJ_G0024010) Ifnk (MGP_PahariEiJ_G0024011) C9orf72 (MGP_PahariEiJ_G0024012) Lingo2 (MGP_PahariEiJ_G0024013) 1700009N14Rik (MGP_PahariEiJ_G0024014) ##22 Aco1 (MGP_PahariEiJ_G0024015) Rigi (MGP_PahariEiJ_G0024016) Topors (MGP_PahariEiJ_G0024017) Ndufb6 (MGP_PahariEiJ_G0024018) Tmem215 (MGP_PahariEiJ_G0024019) Aptx (MGP_PahariEiJ_G0024020) Dnaja1 (MGP_PahariEiJ_G0024021) Smu1 (MGP_PahariEiJ_G0024022) B4galt1 (MGP_PahariEiJ_G0024023) Spink4 (MGP_PahariEiJ_G0024024) MGP_PahariEiJ_G0024025 Chmp5 (MGP_PahariEiJ_G0024026) Nfx1 (MGP_PahariEiJ_G0024027) Aqp7 (MGP_PahariEiJ_G0024028) Aqp3 (MGP_PahariEiJ_G0024029) Mus_A ANCESTRAL SPECIES 3 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Ryukyu mouse MODERN SPECIES 13 Cnr1 (MGP_CAROLIEiJ_G0025876) Spaca1 (MGP_CAROLIEiJ_G0025877) Akirin2 (MGP_CAROLIEiJ_G0025878) Orc3 (MGP_CAROLIEiJ_G0025879) Rars2 (MGP_CAROLIEiJ_G0025880) Slc35a1 (MGP_CAROLIEiJ_G0025881) MGP_CAROLIEiJ_G0025882 Gm136 (MGP_CAROLIEiJ_G0025883) Smim8 (MGP_CAROLIEiJ_G0025884) Zfp292 (MGP_CAROLIEiJ_G0025885) Cga (MGP_CAROLIEiJ_G0025886) Mob3b (MGP_CAROLIEiJ_G0025887) Ifnk (MGP_CAROLIEiJ_G0025888) C9orf72 (MGP_CAROLIEiJ_G0025889) Lingo2 (MGP_CAROLIEiJ_G0025890) 1700009N14Rik (MGP_CAROLIEiJ_G0025891) ##22 Aco1 (MGP_CAROLIEiJ_G0025892) Rigi (MGP_CAROLIEiJ_G0025893) Topors (MGP_CAROLIEiJ_G0025894) Ndufb6 (MGP_CAROLIEiJ_G0025895) Tmem215 (MGP_CAROLIEiJ_G0025896) MGP_CAROLIEiJ_G0025897 Dnaja1 (MGP_CAROLIEiJ_G0025898) Smu1 (MGP_CAROLIEiJ_G0025899) B4galt1 (MGP_CAROLIEiJ_G0025900) Spink4 (MGP_CAROLIEiJ_G0025901) MGP_CAROLIEiJ_G0025902 Chmp5 (MGP_CAROLIEiJ_G0025903) Nfx1 (MGP_CAROLIEiJ_G0025904) Aqp7 (MGP_CAROLIEiJ_G0025905) Aqp3 (MGP_CAROLIEiJ_G0025906) Mus_B ANCESTRAL SPECIES 22 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Mouse DUPLICATION Mouse MODERN SPECIES 16 Nlrp4c (ENSMUSG00000034690) Vmn1r65 (ENSMUSG00000066850) Vmn1r64 (ENSMUSG00000118388) Vmn1r63 (ENSMUSG00000058631) Vmn1r62 (ENSMUSG00000092579) Vmn1r61 (ENSMUSG00000117863) Vmn1r60 (ENSMUSG00000118298) Vmn2r28 (ENSMUSG00000066820) Vmn1r59 (ENSMUSG00000117744) Vmn1r58 (ENSMUSG00000078808) Gm5065 (ENSMUSG00000048398) Nlrp2 (ENSMUSG00000035177) Vmn1r57 (ENSMUSG00000091652) Vmn1r56 (ENSMUSG00000091874) Vmn1r55 (ENSMUSG00000118215) Rasl2-9 (ENSMUSG00000083649) ##22 Rfpl4 (ENSMUSG00000035191) Epn1 (ENSMUSG00000035203) U2af2 (ENSMUSG00000030435) Zfp580 (ENSMUSG00000055633) Zfp784 (ENSMUSG00000043290) Ccdc106 (ENSMUSG00000035228) Zfp865 (ENSMUSG00000074405) Gm44973 (ENSMUSG00000109129) Zfp524 (ENSMUSG00000051184) Fiz1 (ENSMUSG00000061374) Zfp579 (ENSMUSG00000051550) Sbk3 (ENSMUSG00000085272) Sbk2 (ENSMUSG00000030433) Ssc5d (ENSMUSG00000035279) Nat14 (ENSMUSG00000035285) Mouse MODERN SPECIES 13 Cnr1 (ENSMUSG00000044288) Spaca1 (ENSMUSG00000028264) Akirin2 (ENSMUSG00000028291) Orc3 (ENSMUSG00000040044) Rars2 (ENSMUSG00000028292) Slc35a1 (ENSMUSG00000028293) Cfap206 (ENSMUSG00000028294) Gm136 (ENSMUSG00000071015) Smim8 (ENSMUSG00000028295) Zfp292 (ENSMUSG00000039967) Cga (ENSMUSG00000028298) Mob3b (ENSMUSG00000073910) Ifnk (ENSMUSG00000042993) C9orf72 (ENSMUSG00000028300) Lingo2 (ENSMUSG00000045083) 1700009N14Rik (ENSMUSG00000028287) ##22 Aco1 (ENSMUSG00000028405) Rigi (ENSMUSG00000040296) Topors (ENSMUSG00000036822) Smim27 (ENSMUSG00000028407) Ndufb6 (ENSMUSG00000071014) Tmem215 (ENSMUSG00000046593) Aptx (ENSMUSG00000028411) Dnaja1 (ENSMUSG00000028410) Smu1 (ENSMUSG00000028409) B4galt1 (ENSMUSG00000028413) Spink4 (ENSMUSG00000028415) Bag1 (ENSMUSG00000028416) Chmp5 (ENSMUSG00000028419) Nfx1 (ENSMUSG00000028423) Aqp7 (ENSMUSG00000028427) Mus_C ANCESTRAL SPECIES 2 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2355 Vmn1r55 (ENSMSIG00000012807) Rasl2-9 (ENSMSIG00000012818) ##22 Rfpl4 (ENSMSIG00000012826) Epn1 (ENSMSIG00000012854) U2af2 (ENSMSIG00000012917) Ccdc106 (ENSMSIG00000012988) Zfp580 (ENSMSIG00000013023) Zfp784 (ENSMSIG00000013038) ENSMSIG00000013054 ENSMSIG00000013063 Zfp524 (ENSMSIG00000013074) Fiz1 (ENSMSIG00000013090) Zfp579 (ENSMSIG00000013153) Sbk3 (ENSMSIG00000013159) Sbk2 (ENSMSIG00000013178) Ssc5d (ENSMSIG00000013210) Nat14 (ENSMSIG00000013294) Steppe mouse MODERN SPECIES 2459 1700009N14Rik (ENSMSIG00000022193) ##22 spretus DUPLICATION spretus MODERN SPECIES 16 MGP_SPRETEiJ_G0030221 Zfp583 (MGP_SPRETEiJ_G0030220) Zfp667 (MGP_SPRETEiJ_G0030219) Epp13 (MGP_SPRETEiJ_G0030218) Zscan5b (MGP_SPRETEiJ_G0030217) Galp (MGP_SPRETEiJ_G0030216) Zfp444 (MGP_SPRETEiJ_G0030215) Zfp787 (MGP_SPRETEiJ_G0030214) Nlrp4c (MGP_SPRETEiJ_G0030213) Vmn1r65 (MGP_SPRETEiJ_G0030212) MGP_SPRETEiJ_G0030211 Gm5065 (MGP_SPRETEiJ_G0030210) Nlrp2 (MGP_SPRETEiJ_G0030209) MGP_SPRETEiJ_G0030208 MGP_SPRETEiJ_G0030207 Rasl2-9 (MGP_SPRETEiJ_G0030206) ##22 Rfpl4 (MGP_SPRETEiJ_G0030205) Epn1 (MGP_SPRETEiJ_G0030204) U2af2 (MGP_SPRETEiJ_G0030203) MGP_SPRETEiJ_G0030202 MGP_SPRETEiJ_G0030201 MGP_SPRETEiJ_G0030200 Zfp784 (MGP_SPRETEiJ_G0030199) MGP_SPRETEiJ_G0030198 MGP_SPRETEiJ_G0030197 Zfp865 (MGP_SPRETEiJ_G0030196) Zfp524 (MGP_SPRETEiJ_G0030195) Fiz1 (MGP_SPRETEiJ_G0030194) Zfp579 (MGP_SPRETEiJ_G0030193) Sbk3 (MGP_SPRETEiJ_G0030192) Sbk2 (MGP_SPRETEiJ_G0030191) spretus MODERN SPECIES 13 Cnr1 (MGP_SPRETEiJ_G0026825) Spaca1 (MGP_SPRETEiJ_G0026826) Akirin2 (MGP_SPRETEiJ_G0026827) Orc3 (MGP_SPRETEiJ_G0026828) Rars2 (MGP_SPRETEiJ_G0026829) Slc35a1 (MGP_SPRETEiJ_G0026830) MGP_SPRETEiJ_G0026831 Gm136 (MGP_SPRETEiJ_G0026832) Smim8 (MGP_SPRETEiJ_G0026833) Zfp292 (MGP_SPRETEiJ_G0026834) Cga (MGP_SPRETEiJ_G0026835) Mob3b (MGP_SPRETEiJ_G0026836) Ifnk (MGP_SPRETEiJ_G0026837) C9orf72 (MGP_SPRETEiJ_G0026838) Lingo2 (MGP_SPRETEiJ_G0026839) 1700009N14Rik (MGP_SPRETEiJ_G0026840) ##22 Aco1 (MGP_SPRETEiJ_G0026841) Rigi (MGP_SPRETEiJ_G0026842) Ndufb6 (MGP_SPRETEiJ_G0026843) Tmem215 (MGP_SPRETEiJ_G0026844) Smu1 (MGP_SPRETEiJ_G0026845) Aptx (MGP_SPRETEiJ_G0026846) MGP_SPRETEiJ_G0026847 B4galt1 (MGP_SPRETEiJ_G0026848) Spink4 (MGP_SPRETEiJ_G0026849) MGP_SPRETEiJ_G0026850 Chmp5 (MGP_SPRETEiJ_G0026851) Nfx1 (MGP_SPRETEiJ_G0026852) Aqp7 (MGP_SPRETEiJ_G0026853) Aqp3 (MGP_SPRETEiJ_G0026854) Nol6 (MGP_SPRETEiJ_G0026855) Rat DUPLICATION Rat MODERN SPECIES Obox2 (ENSRNOG00000069076) LOC120098145 (ENSRNOG00000060136) LOC120098147 (ENSRNOG00000032891) Vom1r32 (ENSRNOG00000067757) Nlrp9 (ENSRNOG00000021913) Vom1r39 (ENSRNOG00000070447) LOC120099323 (ENSRNOG00000064948) Vom1r34 (ENSRNOG00000068548) LOC120099328 (ENSRNOG00000068676) Vom1r35 (ENSRNOG00000033755) LOC120093107 (ENSRNOG00000062966) AABR07038567.1 (ENSRNOG00000047748) Vom1r36 (ENSRNOG00000070755) Vom1r37 (ENSRNOG00000038647) Vom1r38 (ENSRNOG00000065923) Rasl2-9 (ENSRNOG00000032913) ##22 Rfpl4a (ENSRNOG00000015743) Epn1 (ENSRNOG00000015753) U2af2 (ENSRNOG00000015914) Ccdc106 (ENSRNOG00000015997) Zfp580 (ENSRNOG00000016274) Zfp865 (ENSRNOG00000016279) Znf865 (ENSRNOG00000028628) Zfp524 (ENSRNOG00000016565) Fiz1 (ENSRNOG00000016574) Zfp579 (ENSRNOG00000016608) Sbk3 (ENSRNOG00000042927) Sbk2 (ENSRNOG00000038625) Ssc5d (ENSRNOG00000016687) Nat14 (ENSRNOG00000038622) Nat14 (ENSRNOG00000067958) Rat MODERN SPECIES 15 AABR07047835.1 (ENSRNOG00000023101) Akirin2 (ENSRNOG00000008288) Orc3 (ENSRNOG00000008314) Rars2 (ENSRNOG00000008643) Slc35a1 (ENSRNOG00000008908) Cfap206 (ENSRNOG00000009061) C5h6orf163 (ENSRNOG00000009178) Smim8 (ENSRNOG00000023035) Zfp292 (ENSRNOG00000031031) ENSRNOG00000063545 Cga (ENSRNOG00000009269) Mob3b (ENSRNOG00000009453) Ifnk (ENSRNOG00000022990) RGD1359108 (ENSRNOG00000009478) Lingo2 (ENSRNOG00000005634) RGD1306195 (ENSRNOG00000031013) ##22 Aco1 (ENSRNOG00000005849) Rig1 (ENSRNOG00000006384) Topors (ENSRNOG00000006485) Smim27 (ENSRNOG00000069822) Ndufb6 (ENSRNOG00000024539) ENSRNOG00000064831 Tmem215 (ENSRNOG00000042246) ENSRNOG00000063142 Aptx (ENSRNOG00000006582) Dnaja1 (ENSRNOG00000007029) Smu1 (ENSRNOG00000007671) B4galt1 (ENSRNOG00000059461) Spink4 (ENSRNOG00000008252) Bag1 (ENSRNOG00000008277) Chmp5 (ENSRNOG00000008672) Cricetidae ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.a ##22 ENSGT00940000153786.e.a.b #22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b Cricetidae_B ANCESTRAL SPECIES 2 ENSGT01060000248564.a.a ENSGT00390000004211 ENSGT00940000156096 ENSGT00390000011376 ENSGT00530000063407.a ENSGT00950000182827.E ENSGT00390000016036 ENSGT00390000010837 ENSGT00390000011674 ENSGT00950000183034.C ENSGT00390000012242 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000153786.e.a.a ##22 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 ENSGT00390000006684 ENSGT00940000156806 ENSGT00940000153558.b.i.a.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00940000159054 Prairie vole MODERN SPECIES 355 Cnr1 (ENSMOCG00000021705) Spaca1 (ENSMOCG00000021101) Akirin2 (ENSMOCG00000010817) Orc3 (ENSMOCG00000006825) Rars2 (ENSMOCG00000003114) Slc35a1 (ENSMOCG00000016778) Cfap206 (ENSMOCG00000002740) Gm136 (ENSMOCG00000011969) Smim8 (ENSMOCG00000018030) Zfp292 (ENSMOCG00000012951) Cga (ENSMOCG00000021815) Mob3b (ENSMOCG00000022912) ENSMOCG00000000902 C9orf72 (ENSMOCG00000012396) Lingo2 (ENSMOCG00000005703) 1700009N14Rik (ENSMOCG00000006091) ##22 Aco1 (ENSMOCG00000015393) Rigi (ENSMOCG00000006173) Topors (ENSMOCG00000014556) Smim27 (ENSMOCG00000017940) Ndufb6 (ENSMOCG00000022906) Tmem215 (ENSMOCG00000003322) Aptx (ENSMOCG00000000869) ENSMOCG00000017987 Smu1 (ENSMOCG00000010476) B4galt1 (ENSMOCG00000015682) Spink4 (ENSMOCG00000005588) Bag1 (ENSMOCG00000012982) Chmp5 (ENSMOCG00000013413) Nfx1 (ENSMOCG00000007616) Aqp7 (ENSMOCG00000015973) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 15 Bri3bp (ENSPEMG00000030586) #9 ENSPEMG00000005759 Aacs (ENSPEMG00000017324) #10 Tmem132b (ENSPEMG00000016823) #11 ENSPEMG00000010358 ENSPEMG00000029050 Tmem132c (ENSPEMG00000008618) #14 Slc15a4 (ENSPEMG00000004648) #15 Glt1d1 (ENSPEMG00000014462) #16 Tmem132d (ENSPEMG00000012281) #17 ENSPEMG00000026913 Fzd10 (ENSPEMG00000014059) #18 Piwil1 (ENSPEMG00000019053) #19 Rimbp2 (ENSPEMG00000009932) #20 Stx2 (ENSPEMG00000017328) #21 ENSPEMG00000013844 ##22 ENSPEMG00000013538 Adgrd1 (ENSPEMG00000019028) #23 Sfswap (ENSPEMG00000001237) #25 Mmp17 (ENSPEMG00000018027) #26 Zfp11 (ENSPEMG00000015830) ENSPEMG00000031378 ENSPEMG00000029213 Septin14 (ENSPEMG00000004502) Mrps17 (ENSPEMG00000025103) Nipsnap2 (ENSPEMG00000012314) Psph (ENSPEMG00000011314) Cct6a (ENSPEMG00000006383) Sumf2 (ENSPEMG00000012224) Phkg1 (ENSPEMG00000006299) ENSPEMG00000000262 Northern American deer mouse MODERN SPECIES 21 ENSPEMG00000018217 ENSPEMG00000012981 Adra1b (ENSPEMG00000018698) Ttc1 (ENSPEMG00000018843) Pwwp2a (ENSPEMG00000000774) Fabp6 (ENSPEMG00000004485) Ccnjl (ENSPEMG00000007234) C1qtnf2 (ENSPEMG00000008301) Slu7 (ENSPEMG00000016646) ENSPEMG00000007013 Atp10b (ENSPEMG00000014226) ENSPEMG00000029937 ENSPEMG00000029792 Gabrb2 (ENSPEMG00000017451) Gabra6 (ENSPEMG00000000050) ENSPEMG00000027790 ##22 Gabra1 (ENSPEMG00000026750) Gabrg2 (ENSPEMG00000016073) ENSPEMG00000027245 Nudcd2 (ENSPEMG00000030830) Hmmr (ENSPEMG00000011199) Mat2b (ENSPEMG00000000715) ENSPEMG00000025585 Tenm2 (ENSPEMG00000018309) Wwc1 (ENSPEMG00000011501) Rars (ENSPEMG00000020288) Fbll1 (ENSPEMG00000020325) Pank3 (ENSPEMG00000024678) Slit3 (ENSPEMG00000018195) ENSPEMG00000025128 ENSPEMG00000013732 Northern American deer mouse MODERN SPECIES 11 Orc3 (ENSPEMG00000004705) Rars2 (ENSPEMG00000014309) Slc35a1 (ENSPEMG00000000717) Cfap206 (ENSPEMG00000015467) Gm136 (ENSPEMG00000017733) Smim8 (ENSPEMG00000025939) Zfp292 (ENSPEMG00000005046) Cga (ENSPEMG00000006659) Mob3b (ENSPEMG00000029804) ENSPEMG00000026184 Ifnk (ENSPEMG00000008046) C9orf72 (ENSPEMG00000014945) Lingo2 (ENSPEMG00000014136) ENSPEMG00000027823 ENSPEMG00000024364 1700009N14Rik (ENSPEMG00000010658) ##22 Aco1 (ENSPEMG00000018464) Rigi (ENSPEMG00000012372) Topors (ENSPEMG00000016256) Smim27 (ENSPEMG00000004450) Ndufb6 (ENSPEMG00000009309) Tmem215 (ENSPEMG00000028971) Aptx (ENSPEMG00000007747) Dnaja1 (ENSPEMG00000002541) Smu1 (ENSPEMG00000012247) B4galt1 (ENSPEMG00000012832) Spink4 (ENSPEMG00000016566) Bag1 (ENSPEMG00000000459) ENSPEMG00000007371 Nfx1 (ENSPEMG00000007625) Aqp7 (ENSPEMG00000018894) Cricetinae ANCESTRAL SPECIES 27 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.a ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 130 Scarb1 (ENSCGRG00001016917) ENSCGRG00001012135 #7 Dhx37 (ENSCGRG00001014560) #8 Bri3bp (ENSCGRG00001019985) #9 ENSCGRG00001007481 Aacs (ENSCGRG00001020683) #10 Tmem132b (ENSCGRG00001021054) #11 Tmem132c (ENSCGRG00001022760) #14 Slc15a4 (ENSCGRG00001011353) #15 Glt1d1 (ENSCGRG00001020071) #16 Tmem132d (ENSCGRG00001017606) #17 Fzd10 (ENSCGRG00001004683) #18 ENSCGRG00001023409 #19 Rimbp2 (ENSCGRG00001011047) #20 Stx2 (ENSCGRG00001010784) #21 ENSCGRG00001017557 ##22 Adgrd1 (ENSCGRG00001019377) #23 Sfswap (ENSCGRG00001011284) #25 Mmp17 (ENSCGRG00001013966) #26 Zfp11 (ENSCGRG00001023132) Septin14 (ENSCGRG00001018571) ENSCGRG00001022160 Mrps17 (ENSCGRG00001012873) Nipsnap2 (ENSCGRG00001024365) Psph (ENSCGRG00001018556) Cct6a (ENSCGRG00001020238) ENSCGRG00001019224 Phkg1 (ENSCGRG00001003774) Chinese hamster chok1gshd MODERN SPECIES 66 Hao2 (ENSCGRG00001020203) ENSCGRG00001023014 ENSCGRG00001013270 ENSCGRG00001019902 Zfp697 (ENSCGRG00001008232) ENSCGRG00001015588 Hmgcs2 (ENSCGRG00001020820) Reg4 (ENSCGRG00001000234) Adam30 (ENSCGRG00001009068) Notch2 (ENSCGRG00001014398) Sec22b (ENSCGRG00001021908) Pde4dip (ENSCGRG00001021057) Prkab2 (ENSCGRG00001018736) Fmo5 (ENSCGRG00001013887) Chd1l (ENSCGRG00001021624) ENSCGRG00001009212 ##22 ENSCGRG00001003668 ENSCGRG00001012037 ENSCGRG00001015976 Bcl9 (ENSCGRG00001021508) Acp6 (ENSCGRG00001024205) Gja5 (ENSCGRG00001005163) Gja8 (ENSCGRG00001004099) Gpr89 (ENSCGRG00001010733) ENSCGRG00001005229 Pdzk1 (ENSCGRG00001017392) Cd160 (ENSCGRG00001006376) Rnf115 (ENSCGRG00001002010) Polr3c (ENSCGRG00001005471) Nudt17 (ENSCGRG00001018476) Pias3 (ENSCGRG00001023567) Chinese hamster chok1gshd MODERN SPECIES 160 ENSCGRG00001022426 Cd164 (ENSCGRG00001020972) Ppil6 (ENSCGRG00001020658) Smpd2 (ENSCGRG00001019999) Mical1 (ENSCGRG00001014476) Zbtb24 (ENSCGRG00001019499) ENSCGRG00001017899 Fig4 (ENSCGRG00001015893) Gpr6 (ENSCGRG00001015004) Wasf1 (ENSCGRG00001013706) Cdc40 (ENSCGRG00001012490) Mettl24 (ENSCGRG00001012045) Ddo (ENSCGRG00001010313) Slc22a16 (ENSCGRG00001010111) ENSCGRG00001008723 ENSCGRG00001006339 ##22 Cdk19 (ENSCGRG00001013081) ENSCGRG00001010501 Gtf3c6 (ENSCGRG00001010188) ENSCGRG00001007331 ENSCGRG00001014458 Slc16a10 (ENSCGRG00001004043) ENSCGRG00001001576 ENSCGRG00001000675 Mfsd4b5 (ENSCGRG00001023659) ENSCGRG00001021041 ENSCGRG00001019786 Mfsd4b4 (ENSCGRG00001018700) Rev3l (ENSCGRG00001006588) Traf3ip2 (ENSCGRG00001022894) Fyn (ENSCGRG00001013292) Chinese hamster chok1gshd MODERN SPECIES 111 SLC35A1 (ENSCGRG00001019920) Cfap206 (ENSCGRG00001002156) ENSCGRG00001014099 Smim8 (ENSCGRG00001012821) ENSCGRG00001006646 Zfp292 (ENSCGRG00001003267) Cga (ENSCGRG00001000454) ENSCGRG00001024026 ENSCGRG00001023523 Mob3b (ENSCGRG00001022528) ENSCGRG00001021493 ENSCGRG00001006221 C9orf72 (ENSCGRG00001013910) Lingo2 (ENSCGRG00001009497) ENSCGRG00001010834 1700009N14Rik (ENSCGRG00001004727) ##22 Aco1 (ENSCGRG00001024337) Rigi (ENSCGRG00001024123) Topors (ENSCGRG00001022117) Ndufb6 (ENSCGRG00001021089) Tmem215 (ENSCGRG00001009559) Aptx (ENSCGRG00001000705) Dnaja1 (ENSCGRG00001009232) Smu1 (ENSCGRG00001023488) B4galt1 (ENSCGRG00001014638) Spink4 (ENSCGRG00001023982) Bag1 (ENSCGRG00001022434) ENSCGRG00001017457 Nfx1 (ENSCGRG00001002869) Aqp7 (ENSCGRG00001011847) Aqp3 (ENSCGRG00001011352) Golden Hamster DUPLICATION Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 711 ENSMAUG00000000456 Rab7b (ENSMAUG00000000889) Ctse (ENSMAUG00000000148) Avpr1b (ENSMAUG00000000787) ENSMAUG00000015974 ##22 Fam72a (ENSMAUG00000002396) Srgap2 (ENSMAUG00000001334) Ikbke (ENSMAUG00000008340) Rassf5 (ENSMAUG00000003801) Eif2d (ENSMAUG00000008390) Dyrk3 (ENSMAUG00000012125) Mapkapk2 (ENSMAUG00000005670) Il10 (ENSMAUG00000009096) Il19 (ENSMAUG00000010846) Il20 (ENSMAUG00000013324) Il24 (ENSMAUG00000010477) Fcmr (ENSMAUG00000012462) Pigr (ENSMAUG00000013137) Fcamr (ENSMAUG00000014341) AA986860 (ENSMAUG00000012446) Golden Hamster MODERN SPECIES 655 Dcbld1 (ENSMAUG00000010738) Gopc (ENSMAUG00000007546) Nepn (ENSMAUG00000018286) Nus1 (ENSMAUG00000019803) Slc35f1 (ENSMAUG00000011113) Cep85l (ENSMAUG00000015193) Pln (ENSMAUG00000007750) ENSMAUG00000012325 Mcm9 (ENSMAUG00000015317) Asf1a (ENSMAUG00000014310) ENSMAUG00000016420 ENSMAUG00000021290 Man1a (ENSMAUG00000005709) ENSMAUG00000008410 Tbc1d32 (ENSMAUG00000010218) ENSMAUG00000008105 ##22 Gja1 (ENSMAUG00000006558) Hsf2 (ENSMAUG00000011405) Serinc1 (ENSMAUG00000013116) Fabp7 (ENSMAUG00000020171) Smpdl3a (ENSMAUG00000013580) ENSMAUG00000020333 Ing1 (ENSMAUG00000021473) Ankrd10 (ENSMAUG00000008891) Arhgef7 (ENSMAUG00000017686) Sox1 (ENSMAUG00000007129) ENSMAUG00000003554 Tubgcp3 (ENSMAUG00000020305) Atp11a (ENSMAUG00000008557) Mcf2l (ENSMAUG00000019731) F7 (ENSMAUG00000010922) Golden Hamster MODERN SPECIES 864 1700009N14Rik (ENSMAUG00000001820) ##22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1885 ENSNGAG00000023425 Pex5 (ENSNGAG00000022852) Clstn3 (ENSNGAG00000022664) ENSNGAG00000018451 C1rl (ENSNGAG00000023384) ENSNGAG00000021958 ENSNGAG00000019975 Lpcat3 (ENSNGAG00000019456) Emg1 (ENSNGAG00000022592) ENSNGAG00000023489 Ptpn6 (ENSNGAG00000006668) Grcc10 (ENSNGAG00000015624) Atn1 (ENSNGAG00000003346) Eno2 (ENSNGAG00000019726) Lrrc23 (ENSNGAG00000023434) ENSNGAG00000019265 ##22 Spsb2 (ENSNGAG00000008201) Tpi1 (ENSNGAG00000017109) Usp5 (ENSNGAG00000011453) Cdca3 (ENSNGAG00000016633) Gnb3 (ENSNGAG00000023501) P3h3 (ENSNGAG00000015076) Gpr162 (ENSNGAG00000002840) ENSNGAG00000022963 Lag3 (ENSNGAG00000009790) ENSNGAG00000021065 Mlf2 (ENSNGAG00000016666) Cops7a (ENSNGAG00000022873) Pianp (ENSNGAG00000013944) Zfp384 (ENSNGAG00000011316) Ing4 (ENSNGAG00000016704) Upper Galilee mountains blind mole rat MODERN SPECIES 550 Tasp1 (ENSNGAG00000018286) Ism1 (ENSNGAG00000016643) Sptlc3 (ENSNGAG00000023688) ENSNGAG00000021331 ##22 Btbd3 (ENSNGAG00000022122) Jag1 (ENSNGAG00000001350) ENSNGAG00000018015 Mkks (ENSNGAG00000017713) Snap25 (ENSNGAG00000010832) Ankef1 (ENSNGAG00000020972) Pak5 (ENSNGAG00000023707) Lamp5 (ENSNGAG00000022139) Primates ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Platyrrhini ANCESTRAL SPECIES 37 ENSGT00910000148270 ENSGT00940000157879 ENSGT00390000017916 ENSGT00390000012731.a.b ENSGT00940000155248 ENSGT00390000001856 ENSGT01090000259987.b.b.a.b ENSGT00940000154419.b ENSGT00710000106813.A ENSGT00940000160130 ENSGT00940000157406 ENSGT00930000151029 ENSGT00940000158398 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000153786.e.a.a ##22 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 ENSGT00390000000903.b ENSGT01050000244850.A.b ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00390000016807 ENSGT01050000244824.F Mas night monkey MODERN SPECIES 1130 SLC41A3 (ENSANAG00000034469) ALDH1L1 (ENSANAG00000035887) ENSANAG00000020848 ##22 KLF15 (ENSANAG00000029612) CFAP100 (ENSANAG00000036664) ZXDC (ENSANAG00000030993) UROC1 (ENSANAG00000037510) CHST13 (ENSANAG00000011064) C3orf22 (ENSANAG00000036080) TXNRD3 (ENSANAG00000034426) CHCHD6 (ENSANAG00000018993) PLXNA1 (ENSANAG00000035335) PRR23E (ENSANAG00000030576) ENSANAG00000028555 ENSANAG00000019489 TPRA1 (ENSANAG00000035830) MCM2 (ENSANAG00000017116) Cebidae ANCESTRAL SPECIES 35 ENSGT00530000062962.a.a ENSGT00940000157879 ENSGT00390000017916 ENSGT00390000012731.a.b ENSGT00940000155248 ENSGT00390000001856 ENSGT01090000259987.b.b.a.b ENSGT00940000154419.b ENSGT00710000106813.A ENSGT00940000160130 ENSGT00940000157406 ENSGT00930000151029 ENSGT00940000158398 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000153786.e.a.a ##22 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 ENSGT01030000237923 ENSGT00390000000903.b ENSGT01050000244850.A.b ENSGT00390000007772.b.b ENSGT00390000001542.a ENSGT00390000016807 ENSGT01050000244824.F Cebidae_a ANCESTRAL SPECIES 125 ENSGT00950000183042.b ENSGT00940000160913 ENSGT00940000153786.e.a.a ##22 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 ENSGT01030000237923 ENSGT00390000000903.b ENSGT01050000244850.A.b ENSGT00390000001542.a ENSGT00390000016807 ENSGT01050000244824.F Capuchin DUPLICATION Capuchin MODERN SPECIES 87 TMEM50A (ENSCCAG00000028013) ENSCCAG00000020865 MACO1 (ENSCCAG00000030283) LDLRAP1 (ENSCCAG00000026769) MAN1C1 (ENSCCAG00000024764) ENSCCAG00000031215 MTFR1L (ENSCCAG00000012327) AUNIP (ENSCCAG00000030698) ENSCCAG00000028161 PAFAH2 (ENSCCAG00000024562) EXTL1 (ENSCCAG00000033300) SLC30A2 (ENSCCAG00000021276) TRIM63 (ENSCCAG00000034250) ENSCCAG00000019830 PDIK1L (ENSCCAG00000033260) ENSCCAG00000026100 ##22 FAM110D (ENSCCAG00000018942) C1orf232 (ENSCCAG00000025437) ZNF593 (ENSCCAG00000030595) ZNF593OS (ENSCCAG00000033003) CNKSR1 (ENSCCAG00000020078) CATSPER4 (ENSCCAG00000031230) CEP85 (ENSCCAG00000017685) SH3BGRL3 (ENSCCAG00000033774) UBXN11 (ENSCCAG00000027516) CD52 (ENSCCAG00000036481) CRYBG2 (ENSCCAG00000036704) ZNF683 (ENSCCAG00000016907) LIN28A (ENSCCAG00000012963) DHDDS (ENSCCAG00000018751) HMGN2 (ENSCCAG00000011522) Capuchin MODERN SPECIES 566 UMPS (ENSCCAG00000035562) KALRN (ENSCCAG00000034890) SLC41A3 (ENSCCAG00000018770) ALDH1L1 (ENSCCAG00000030254) ENSCCAG00000033982 ##22 KLF15 (ENSCCAG00000026785) CFAP100 (ENSCCAG00000036469) ZXDC (ENSCCAG00000029979) UROC1 (ENSCCAG00000035012) CHST13 (ENSCCAG00000020937) C3orf22 (ENSCCAG00000032902) TXNRD3 (ENSCCAG00000023053) ENSCCAG00000035476 PLXNA1 (ENSCCAG00000025954) C3orf56 (ENSCCAG00000029808) Catarrhini ANCESTRAL SPECIES 14 ENSGT00910000148572 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 ENSGT00940000153441.a.a Hominoidea ANCESTRAL SPECIES 10 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00390000013266.b ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000010063.o.b ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 Hominidae ANCESTRAL SPECIES 12 ENSGT00940000153676.a ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000010063.o.b ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000153676.a ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00860000136092 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000010063.o.b ENSGT00940000154256.l.a ENSGT00390000014876.o.a ENSGT00940000153763.b ENSGT00940000158460 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Pan ANCESTRAL SPECIES 7 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00390000013266.b ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00950000182965.a.b.b.b.g.b.a.a ENSGT00940000160772 ENSGT00860000136092 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00970000193421.C.a.vb.a ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00390000010063.o.b ENSGT00940000154256.l.a ENSGT00390000014876.o.a Bonobo MODERN SPECIES 17 TENM3 (ENSPPAG00000038117) AGA (ENSPPAG00000036906) NEIL3 (ENSPPAG00000035318) VEGFC (ENSPPAG00000043349) ENSPPAG00000035990 ASB5 (ENSPPAG00000034799) SPATA4 (ENSPPAG00000034537) WDR17 (ENSPPAG00000043468) GPM6A (ENSPPAG00000042891) ENSPPAG00000034639 ADAM29 (ENSPPAG00000014578) GLRA3 (ENSPPAG00000036427) HPGD (ENSPPAG00000040053) CEP44 (ENSPPAG00000031462) FBXO8 (ENSPPAG00000035822) ENSPPAG00000026731 ##22 ENSPPAG00000010368 ENSPPAG00000017140 ENSPPAG00000012097 ENSPPAG00000006019 SCRG1 (ENSPPAG00000036840) ENSPPAG00000034405 HMGB2 (ENSPPAG00000043994) GALNT7 (ENSPPAG00000034268) ENSPPAG00000002018 ENSPPAG00000027655 GALNTL6 (ENSPPAG00000003147) AADAT (ENSPPAG00000041158) MFAP3L (ENSPPAG00000041103) ENSPPAG00000041549 ENSPPAG00000041291 Chimpanzee MODERN SPECIES 17 TENM3 (ENSPTRG00000016622) AGA (ENSPTRG00000016618) NEIL3 (ENSPTRG00000016617) VEGFC (ENSPTRG00000016616) SPCS3 (ENSPTRG00000016615) ASB5 (ENSPTRG00000016614) SPATA4 (ENSPTRG00000016612) WDR17 (ENSPTRG00000016611) GPM6A (ENSPTRG00000016609) ENSPTRG00000050820 ADAM29 (ENSPTRG00000016608) GLRA3 (ENSPTRG00000016607) HPGD (ENSPTRG00000016606) CEP44 (ENSPTRG00000016605) FBXO8 (ENSPTRG00000016604) ENSPTRG00000046852 ##22 ENSPTRG00000045495 HAND2 (ENSPTRG00000016601) ENSPTRG00000046676 SCRG1 (ENSPTRG00000016599) SAP30 (ENSPTRG00000016598) HMGB2 (ENSPTRG00000016597) GALNT7 (ENSPTRG00000016596) ENSPTRG00000051120 ENSPTRG00000047261 GALNTL6 (ENSPTRG00000016595) AADAT (ENSPTRG00000016592) MFAP3L (ENSPTRG00000016591) ENSPTRG00000051995 ENSPTRG00000051762 HPF1 (ENSPTRG00000016590) Gorilla MODERN SPECIES 17 DCTD (ENSGGOG00000016412) TENM3 (ENSGGOG00000011344) AGA (ENSGGOG00000007600) NEIL3 (ENSGGOG00000016799) ENSGGOG00000040176 SPCS3 (ENSGGOG00000023323) ASB5 (ENSGGOG00000009089) SPATA4 (ENSGGOG00000001066) WDR17 (ENSGGOG00000010477) GPM6A (ENSGGOG00000002629) ADAM29 (ENSGGOG00000011350) GLRA3 (ENSGGOG00000006359) HPGD (ENSGGOG00000009878) CEP44 (ENSGGOG00000025044) FBXO8 (ENSGGOG00000005344) ENSGGOG00000024847 ##22 HAND2 (ENSGGOG00000006147) ENSGGOG00000012612 SCRG1 (ENSGGOG00000025633) SAP30 (ENSGGOG00000005082) HMGB2 (ENSGGOG00000015882) GALNT7 (ENSGGOG00000028299) ENSGGOG00000022063 GALNTL6 (ENSGGOG00000002766) ENSGGOG00000037146 AADAT (ENSGGOG00000012081) ENSGGOG00000025735 ENSGGOG00000024258 ENSGGOG00000026687 ENSGGOG00000024271 HPF1 (ENSGGOG00000003090) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000008820.e.b.a.b.a ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 Rhinopithecus ANCESTRAL SPECIES 317 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 232 OR6C3 (ENSRBIG00000015248) OR6C74 (ENSRBIG00000039491) STX2 (ENSRBIG00000035888) #21 ENSRBIG00000043720 ##22 ENSRBIG00000033758 ENSRBIG00000040844 LYPD4 (ENSRBIG00000039252) DMRTC2 (ENSRBIG00000023593) RPS19 (ENSRBIG00000028748) CD79A (ENSRBIG00000042949) Black snub-nosed monkey MODERN SPECIES 1810 FBXO8 (ENSRBIG00000030693) ENSRBIG00000033211 ##22 HAND2 (ENSRBIG00000028566) Cercopithecinae ANCESTRAL SPECIES 14 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000008820.e.b.a.b.a ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000008820.e.b.a.b.a ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb.a ENSGT00940000158105 ENSGT00940000155038 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000004594 ENSGT00390000011576.a ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 Macaca ANCESTRAL SPECIES 18 ENSGT01030000234566.e.b.a.a ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000158602 ENSGT00390000006915.d ENSGT00940000163394 ENSGT00940000158368 ENSGT00940000154593.a.b ENSGT00390000008820.e.b.a.b.a ENSGT00390000009873 ENSGT00940000158356 ENSGT00940000153786.e.a.a ##22 ENSGT00940000160772 ENSGT00390000009191 ENSGT00390000006633.b ENSGT00940000154466.rb.a ENSGT00940000158105 ENSGT00540000070023.c.b.a.a.a.a ENSGT00940000155038 ENSGT00390000004594 ENSGT00390000011576.a ENSGT00940000154256.l.a ENSGT00390000014876 ENSGT00940000153763.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 Pig-tailed macaque MODERN SPECIES 375 TENM3 (ENSMNEG00000030271) AGA (ENSMNEG00000037318) NEIL3 (ENSMNEG00000036177) VEGFC (ENSMNEG00000045119) SPCS3 (ENSMNEG00000036272) ASB5 (ENSMNEG00000034889) SPATA4 (ENSMNEG00000033332) WDR17 (ENSMNEG00000033941) GPM6A (ENSMNEG00000042014) GLRA3 (ENSMNEG00000035116) HPGD (ENSMNEG00000040489) ENSMNEG00000043522 CEP44 (ENSMNEG00000012365) FBXO8 (ENSMNEG00000043927) ENSMNEG00000036274 ENSMNEG00000045386 ##22 HAND2 (ENSMNEG00000039463) SCRG1 (ENSMNEG00000032472) SAP30 (ENSMNEG00000039771) ENSMNEG00000035959 GALNT7 (ENSMNEG00000040629) GALNTL6 (ENSMNEG00000039184) ENSMNEG00000040238 ENSMNEG00000029628 AADAT (ENSMNEG00000014362) MFAP3L (ENSMNEG00000038878) ENSMNEG00000034235 HPF1 (ENSMNEG00000029561) CLCN3 (ENSMNEG00000028245) NEK1 (ENSMNEG00000042336) SH3RF1 (ENSMNEG00000039365) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Drill MODERN SPECIES 933 ENSMLEG00000036391 ##22 ENSMLEG00000035551 SCRG1 (ENSMLEG00000004733) SAP30 (ENSMLEG00000033000) ENSMLEG00000034695 GALNT7 (ENSMLEG00000000070) GALNTL6 (ENSMLEG00000042200) ENSMLEG00000033378 Sooty mangabey MODERN SPECIES 143 ENSCATG00000003513 KCNQ5 (ENSCATG00000024600) ENSCATG00000023513 RIMS1 (ENSCATG00000015586) ENSCATG00000044513 OGFRL1 (ENSCATG00000044369) B3GAT2 (ENSCATG00000041104) SMAP1 (ENSCATG00000002544) SDHAF4 (ENSCATG00000032791) FAM135A (ENSCATG00000032192) COL9A1 (ENSCATG00000028556) COL19A1 (ENSCATG00000042450) LMBRD1 (ENSCATG00000036208) ENSCATG00000033482 ENSCATG00000043415 ENSCATG00000041919 ##22 ENSCATG00000040628 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 817 ENSPCOG00000017248 FAM222A (ENSPCOG00000010217) TRPV4 (ENSPCOG00000028129) GLTP (ENSPCOG00000028356) ENSPCOG00000006014 ENSPCOG00000023587 SLC5A1 (ENSPCOG00000026407) YWHAH (ENSPCOG00000025561) ENSPCOG00000020068 ##22 DEPDC5 (ENSPCOG00000015150) ENSPCOG00000027276 ENSPCOG00000025432 Coquerels sifaka MODERN SPECIES 424 SLC24A5 (ENSPCOG00000024898) MYEF2 (ENSPCOG00000024570) CTXN2 (ENSPCOG00000007859) SLC12A1 (ENSPCOG00000020544) ENSPCOG00000018855 FBN1 (ENSPCOG00000026107) CEP152 (ENSPCOG00000027728) SHC4 (ENSPCOG00000015169) SECISBP2L (ENSPCOG00000014679) COPS2 (ENSPCOG00000013132) GALK2 (ENSPCOG00000016316) ENSPCOG00000027600 ENSPCOG00000027669 FGF7 (ENSPCOG00000025535) DTWD1 (ENSPCOG00000000343) ENSPCOG00000027901 ##22 ENSPCOG00000009623 ATP8B4 (ENSPCOG00000025693) SLC27A2 (ENSPCOG00000003546) HDC (ENSPCOG00000013488) USP8 (ENSPCOG00000026775) USP50 (ENSPCOG00000027706) ENSPCOG00000020743 TRPM7 (ENSPCOG00000028104) SPPL2A (ENSPCOG00000015701) AP4E1 (ENSPCOG00000019301) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Suina ANCESTRAL SPECIES 20 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.a ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Pig MODERN SPECIES 5 DHX37 (ENSSSCG00000009758) #8 ENSSSCG00000048169 BRI3BP (ENSSSCG00000054264) #9 AACS (ENSSSCG00000009755) #10 TMEM132B (ENSSSCG00000009754) #11 ENSSSCG00000042937 TMEM132C (ENSSSCG00000009753) #14 SLC15A4 (ENSSSCG00000025820) #15 GLT1D1 (ENSSSCG00000033067) #16 ENSSSCG00000038306 TMEM132D (ENSSSCG00000038915) #17 FZD10 (ENSSSCG00000009751) #18 PIWIL1 (ENSSSCG00000009749) #19 RIMBP2 (ENSSSCG00000009748) #20 STX2 (ENSSSCG00000009747) #21 ENSSSCG00000009746 ##22 ADGRD1 (ENSSSCG00000009745) #23 SFSWAP (ENSSSCG00000009744) #25 MMP17 (ENSSSCG00000024236) #26 ULK1 (ENSSSCG00000009742) #27 PUS1 (ENSSSCG00000009741) #28 EP400 (ENSSSCG00000028018) #29 DDX51 (ENSSSCG00000028735) #30 NOC4L (ENSSSCG00000009739) #31 GALNT9 (ENSSSCG00000009738) #32 ENSSSCG00000023569 ENSSSCG00000055956 #33 P2RX2 (ENSSSCG00000009735) #35 ENSSSCG00000040810 POLE (ENSSSCG00000033051) #36 ENSSSCG00000032809 Chacoan peccary MODERN SPECIES 812 NCOR2 (ENSCWAG00000018952) SCARB1 (ENSCWAG00000019014) ENSCWAG00000019070 DHX37 (ENSCWAG00000019084) #8 BRI3BP (ENSCWAG00000019109) #9 AACS (ENSCWAG00000019135) #10 TMEM132B (ENSCWAG00000019171) #11 TMEM132C (ENSCWAG00000003715) #14 SLC15A4 (ENSCWAG00000003766) #15 GLT1D1 (ENSCWAG00000003891) #16 ENSCWAG00000004068 #17 FZD10 (ENSCWAG00000004110) #18 PIWIL1 (ENSCWAG00000004134) #19 RIMBP2 (ENSCWAG00000004255) #20 STX2 (ENSCWAG00000004449) #21 ENSCWAG00000004499 ##22 ADGRD1 (ENSCWAG00000004577) #23 SFSWAP (ENSCWAG00000004962) #25 MMP17 (ENSCWAG00000005101) #26 ULK1 (ENSCWAG00000005201) #27 PUS1 (ENSCWAG00000005306) #28 EP400 (ENSCWAG00000005658) #29 ENSCWAG00000010528 #30 NOC4L (ENSCWAG00000010551) #31 GALNT9 (ENSCWAG00000010648) #32 ENSCWAG00000010815 FBRSL1 (ENSCWAG00000010857) #33 P2RX2 (ENSCWAG00000010907) #35 POLE (ENSCWAG00000011160) #36 ENSCWAG00000012048 PXMP2 (ENSCWAG00000012104) #37 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Camelidae ANCESTRAL SPECIES 50 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.a ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Arabian camel MODERN SPECIES 25 SCARB1 (ENSCDRG00005022359) ENSCDRG00005022363 #7 DHX37 (ENSCDRG00005022364) #8 ENSCDRG00005022367 #9 AACS (ENSCDRG00005022368) #10 ENSCDRG00005022369 TMEM132B (ENSCDRG00005022370) #11 TMEM132C (ENSCDRG00005022371) #14 SLC15A4 (ENSCDRG00005022372) #15 GLT1D1 (ENSCDRG00005022374) #16 ENSCDRG00005005081 #17 FZD10 (ENSCDRG00005005248) #18 PIWIL1 (ENSCDRG00005005387) #19 RIMBP2 (ENSCDRG00005005823) #20 STX2 (ENSCDRG00005007216) #21 ENSCDRG00005007636 ##22 ADGRD1 (ENSCDRG00005008511) #23 SFSWAP (ENSCDRG00005012123) #25 MMP17 (ENSCDRG00005012401) #26 ULK1 (ENSCDRG00005012605) #27 PUS1 (ENSCDRG00005013183) #28 ENSCDRG00005013708 #29 ENSCDRG00005013885 #29 DDX51 (ENSCDRG00005014120) #30 NOC4L (ENSCDRG00005014366) #31 GALNT9 (ENSCDRG00005014837) #32 ENSCDRG00005015016 ENSCDRG00005015253 #33 ENSCDRG00005015446 #34 P2RX2 (ENSCDRG00005015638) #35 POLE (ENSCDRG00005016078) #36 Alpaca MODERN SPECIES 404 ENSVPAG00000008876 #21 ENSVPAG00000008880 ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Pecora DUPLICATION Pecora DUPLICATION Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Yarkand deer MODERN SPECIES 3 ENSCHYG00000005083 ENSCHYG00000005069 ##22 TRIM69 (ENSCHYG00000005005) PATL2 (ENSCHYG00000004918) SPG11 (ENSCHYG00000004619) EIF3J (ENSCHYG00000004524) ENSCHYG00000004490 GOLM2 (ENSCHYG00000004442) RPS6KA5 (ENSCHYG00000004366) TTC7B (ENSCHYG00000004186) ENSCHYG00000018988 NRDE2 (ENSCHYG00000018739) PSMC1 (ENSCHYG00000018422) TDP1 (ENSCHYG00000017935) EFCAB11 (ENSCHYG00000017623) FOXN3 (ENSCHYG00000017433) ENSCHYG00000017399 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Bovinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Bos ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Bos_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.a ##22 Cow MODERN SPECIES 8 DHX37 (ENSBTAG00000020414) #8 BRI3BP (ENSBTAG00000001543) #9 AACS (ENSBTAG00000005678) #10 TMEM132B (ENSBTAG00000006626) #11 ENSBTAG00000020532 ENSBTAG00000049587 TMEM132C (ENSBTAG00000046256) #14 SLC15A4 (ENSBTAG00000009167) #15 ENSBTAG00000050393 GLT1D1 (ENSBTAG00000020430) #16 TMEM132D (ENSBTAG00000002950) #17 FZD10 (ENSBTAG00000007047) #18 PIWIL1 (ENSBTAG00000006468) #19 RIMBP2 (ENSBTAG00000009797) #20 STX2 (ENSBTAG00000007988) #21 RAN (ENSBTAG00000055033) ##22 ADGRD1 (ENSBTAG00000013848) #23 SFSWAP (ENSBTAG00000000439) #25 MMP17 (ENSBTAG00000002145) #26 ULK1 (ENSBTAG00000012987) #27 PUS1 (ENSBTAG00000012990) #28 EP400 (ENSBTAG00000020423) #29 DDX51 (ENSBTAG00000017219) #30 NOC4L (ENSBTAG00000011889) #31 GALNT9 (ENSBTAG00000005644) #32 FBRSL1 (ENSBTAG00000039766) #33 LRCOL1 (ENSBTAG00000049454) #34 P2RX2 (ENSBTAG00000007496) #35 POLE (ENSBTAG00000000590) #36 ENSBTAG00000054055 PXMP2 (ENSBTAG00000007510) #37 Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.b ##22 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 27 GPR4 (ENSCHYG00000010273) ENSCHYG00000010242 OPA3 (ENSCHYG00000010190) VASP (ENSCHYG00000009950) PPM1N (ENSCHYG00000009858) RTN2 (ENSCHYG00000009668) FOSB (ENSCHYG00000009403) ERCC1 (ENSCHYG00000008940) POLR1G (ENSCHYG00000008868) PPP1R13L (ENSCHYG00000003620) ERCC2 (ENSCHYG00000003567) KLC3 (ENSCHYG00000003518) CKM (ENSCHYG00000003484) MARK4 (ENSCHYG00000003252) ENSCHYG00000003176 ENSCHYG00000003168 ##22 ENSCHYG00000003146 BLOC1S3 (ENSCHYG00000003138) TRAPPC6A (ENSCHYG00000003117) NKPD1 (ENSCHYG00000003100) PPP1R37 (ENSCHYG00000003054) GEMIN7 (ENSCHYG00000003032) ZNF296 (ENSCHYG00000003020) CLASRP (ENSCHYG00000002995) ##25 RELB (ENSCHYG00000002941) ENSCHYG00000002909 ENSCHYG00000002894 APOE (ENSCHYG00000002871) TOMM40 (ENSCHYG00000002837) NECTIN2 (ENSCHYG00000002809) CLPTM1 (ENSCHYG00000002654) Yarkand deer MODERN SPECIES 10 TRIM59 (ENSCHYG00000015884) KPNA4 (ENSCHYG00000015799) ARL14 (ENSCHYG00000015747) PPM1L (ENSCHYG00000015509) B3GALNT1 (ENSCHYG00000015417) NMD3 (ENSCHYG00000015217) ENSCHYG00000015135 ENSCHYG00000015072 OTOL1 (ENSCHYG00000015009) SI (ENSCHYG00000014337) ENSCHYG00000014231 SLITRK3 (ENSCHYG00000014207) BCHE (ENSCHYG00000014126) ZBBX (ENSCHYG00000013598) SERPINI2 (ENSCHYG00000013524) ENSCHYG00000013505 ##22 WDR49 (ENSCHYG00000013351) PDCD10 (ENSCHYG00000013200) SERPINI1 (ENSCHYG00000013073) ENSCHYG00000013018 GOLIM4 (ENSCHYG00000012537) ENSCHYG00000012434 MECOM (ENSCHYG00000011527) ACTRT3 (ENSCHYG00000011422) MYNN (ENSCHYG00000011363) LRRC34 (ENSCHYG00000011107) LRRIQ4 (ENSCHYG00000011031) LRRC31 (ENSCHYG00000010866) SAMD7 (ENSCHYG00000010756) SEC62 (ENSCHYG00000010630) GPR160 (ENSCHYG00000010569) Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.b ##22 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.a.b ##22 Goat MODERN SPECIES 5 ENSCHIG00000019776 ENSCHIG00000019993 ENSCHIG00000012579 MTDH (ENSCHIG00000020299) ENSCHIG00000007841 MATN2 (ENSCHIG00000022338) RPL30 (ENSCHIG00000016945) ENSCHIG00000021324 RIDA (ENSCHIG00000012463) POP1 (ENSCHIG00000017066) NIPAL2 (ENSCHIG00000015486) ENSCHIG00000004977 KCNS2 (ENSCHIG00000004644) STK3 (ENSCHIG00000010771) OSR2 (ENSCHIG00000019458) ENSCHIG00000006748 ##22 ENSCHIG00000022299 ENSCHIG00000016789 RGS22 (ENSCHIG00000013238) FBXO43 (ENSCHIG00000008303) ENSCHIG00000012813 SPAG1 (ENSCHIG00000018545) RNF19A (ENSCHIG00000014198) ANKRD46 (ENSCHIG00000020276) SNX31 (ENSCHIG00000014508) PABPC1 (ENSCHIG00000023714) ENSCHIG00000017005 ENSCHIG00000020223 ENSCHIG00000007167 GRHL2 (ENSCHIG00000017724) NCALD (ENSCHIG00000008263) Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.b ##22 Bovinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.a.b ##22 American bison MODERN SPECIES 3226 PIWIL1 (ENSBBBG00000018652) #19 RIMBP2 (ENSBBBG00000018624) #20 STX2 (ENSBBBG00000004608) #21 ENSBBBG00000018571 ##22 ADGRD1 (ENSBBBG00000018543) #23 SFSWAP (ENSBBBG00000018437) #25 MMP17 (ENSBBBG00000004492) #26 ULK1 (ENSBBBG00000018342) #27 PUS1 (ENSBBBG00000018304) #28 EP400 (ENSBBBG00000018264) #29 ENSBBBG00000018169 DDX51 (ENSBBBG00000018151) #30 NOC4L (ENSBBBG00000018121) #31 GALNT9 (ENSBBBG00000018097) #32 ENSBBBG00000018058 #34 P2RX2 (ENSBBBG00000018045) #35 POLE (ENSBBBG00000017986) #36 PXMP2 (ENSBBBG00000017790) #37 ENSBBBG00000017788 Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Bovinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Bos ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Bos_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Cow MODERN SPECIES 177 TMEM35A (ENSBTAG00000021252) ENSBTAG00000053172 ARL13A (ENSBTAG00000020390) XKRX (ENSBTAG00000005378) NOX1 (ENSBTAG00000016761) CSTF2 (ENSBTAG00000003547) SYTL4 (ENSBTAG00000005724) BEX3 (ENSBTAG00000006026) TCEAL9 (ENSBTAG00000048143) TCEAL7 (ENSBTAG00000046707) BEX2 (ENSBTAG00000036028) ENSBTAG00000046972 TCEAL8 (ENSBTAG00000027843) ENSBTAG00000051378 ENSBTAG00000050869 ENSBTAG00000014223 ##22 ENSBTAG00000032450 ENSBTAG00000022204 TCEAL1 (ENSBTAG00000049730) MORF4L2 (ENSBTAG00000001311) GLRA4 (ENSBTAG00000003320) PLP1 (ENSBTAG00000006977) RAB9B (ENSBTAG00000019820) ENSBTAG00000047211 ENSBTAG00000052155 ENSBTAG00000014287 ENSBTAG00000046436 SLC25A53 (ENSBTAG00000054469) FAM199X (ENSBTAG00000004008) ESX1 (ENSBTAG00000005953) ENSBTAG00000053380 Hybrid Bos Indicus MODERN SPECIES 315 TBC1D8B (ENSBIXG00005018460) RNF128 (ENSBIXG00005018329) ENSBIXG00005006391 RADX (ENSBIXG00005018283) ENSBIXG00005002953 ENSBIXG00005018216 ENSBIXG00005018115 TCEAL9 (ENSBIXG00005018106) TCEAL7 (ENSBIXG00005018092) ENSBIXG00005018081 ENSBIXG00005018067 ENSBIXG00005018041 ENSBIXG00005018012 ENSBIXG00005017992 ENSBIXG00005017984 ENSBIXG00005017963 ##22 ENSBIXG00005017920 ENSBIXG00005017905 TCEAL1 (ENSBIXG00005017877) MORF4L2 (ENSBIXG00005017850) ENSBIXG00005002887 PLP1 (ENSBIXG00005017771) RAB9B (ENSBIXG00005017727) ENSBIXG00005017693 ENSBIXG00005017650 ENSBIXG00005017634 ENSBIXG00005017617 SLC25A53 (ENSBIXG00005017597) FAM199X (ENSBIXG00005017526) ENSBIXG00005017491 ENSBIXG00005002834 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.`b.b ##22 Goat MODERN SPECIES 24 TM7SF3 (ENSCHIG00000010359) MED21 (ENSCHIG00000017040) STK38L (ENSCHIG00000015117) BMAL2 (ENSCHIG00000019532) SMCO2 (ENSCHIG00000023398) ENSCHIG00000003027 ENSCHIG00000013535 PPFIBP1 (ENSCHIG00000026121) REP15 (ENSCHIG00000007339) ENSCHIG00000018625 ENSCHIG00000025620 KLHL42 (ENSCHIG00000016441) PTHLH (ENSCHIG00000007526) ENSCHIG00000026911 CCDC91 (ENSCHIG00000021171) ENSCHIG00000025632 ##22 ENSCHIG00000007470 FAR2 (ENSCHIG00000023208) ERGIC2 (ENSCHIG00000004824) ENSCHIG00000011926 OVCH1 (ENSCHIG00000017829) TMTC1 (ENSCHIG00000022481) ENSCHIG00000016365 IPO8 (ENSCHIG00000022393) CAPRIN2 (ENSCHIG00000026352) ENSCHIG00000014161 DENND5B (ENSCHIG00000020321) ENSCHIG00000024535 ENSCHIG00000009401 AMN1 (ENSCHIG00000016666) RESF1 (ENSCHIG00000011404) Siberian musk deer MODERN SPECIES 1173 ENSMMSG00000009931 ENSMMSG00000010002 ENSMMSG00000010044 ##22 ENSMMSG00000010080 ENSMMSG00000010133 ENSMMSG00000010185 GDPD5 (ENSMMSG00000010257) KLHL35 (ENSMMSG00000010389) RPS3 (ENSMMSG00000010456) ARRB1 (ENSMMSG00000010638) TPBGL (ENSMMSG00000010742) SLCO2B1 (ENSMMSG00000010784) ENSMMSG00000011132 OR2AT4 (ENSMMSG00000011148) NEU3 (ENSMMSG00000011174) ENSMMSG00000011190 XRRA1 (ENSMMSG00000011230) RNF169 (ENSMMSG00000011474) Yarkand deer MODERN SPECIES 3 SQOR (ENSCHYG00000010838) BLOC1S6 (ENSCHYG00000010914) SLC30A4 (ENSCHYG00000010991) C15orf48 (ENSCHYG00000011060) SPATA5L1 (ENSCHYG00000011113) GATM (ENSCHYG00000011211) SLC28A2 (ENSCHYG00000011368) SHF (ENSCHYG00000011602) DUOX1 (ENSCHYG00000011814) DUOXA1 (ENSCHYG00000012051) DUOXA2 (ENSCHYG00000012114) DUOX2 (ENSCHYG00000012306) SORD (ENSCHYG00000012685) FERMT2 (ENSCHYG00000012885) DDHD1 (ENSCHYG00000013189) ENSCHYG00000013717 ##22 BMP4 (ENSCHYG00000013745) ENSCHYG00000013842 GMFB (ENSCHYG00000014201) CGRRF1 (ENSCHYG00000014731) SAMD4A (ENSCHYG00000014855) ENSCHYG00000015111 GCH1 (ENSCHYG00000015214) WDHD1 (ENSCHYG00000015390) SOCS4 (ENSCHYG00000015826) MAPK1IP1L (ENSCHYG00000015882) LGALS3 (ENSCHYG00000015987) DLGAP5 (ENSCHYG00000016132) ENSCHYG00000016406 FBXO34 (ENSCHYG00000016434) ATG14 (ENSCHYG00000016469) Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Bovinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Bos ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Bos_a ANCESTRAL SPECIES 28 ENSGT00940000160524 ENSGT00940000170462 ENSGT00390000018044.b.a ENSGT00940000154437 ENSGT00530000063340 ENSGT00390000015600.c.b ENSGT00940000154470.a ENSGT00940000167592 ENSGT00940000162144 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000159146 ENSGT00390000014907.B ENSGT00530000065105 ENSGT01030000234510.a.a.a.a.a.b ENSGT00940000164469 ENSGT00940000153786.e.a.a.ab ##22 ENSGT00940000158167 ENSGT00730000111317 ENSGT00390000017600 ENSGT00390000004385 ENSGT00940000161211 ENSGT00520000055637.A.a ENSGT00940000158137.c.a ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00940000156961 ENSGT00940000154973 ENSGT00940000160674 ENSGT00940000161829 ENSGT00940000162214 ENSGT00940000154520.k.a.a ENSGT00940000154520.k.a.b.b.a Wild yak MODERN SPECIES 1520 ENSBMUG00000009193 ##22 CDH20 (ENSBMUG00000009208) Domestic yak MODERN SPECIES 13 ENSBGRG00000014978 SEC11C (ENSBGRG00000015083) ENSBGRG00000015203 RAX (ENSBGRG00000015248) CPLX4 (ENSBGRG00000015391) LMAN1 (ENSBGRG00000015446) CCBE1 (ENSBGRG00000015792) ENSBGRG00000015958 PMAIP1 (ENSBGRG00000015982) MC4R (ENSBGRG00000016023) ENSBGRG00000016053 ENSBGRG00000016227 ENSBGRG00000016258 ENSBGRG00000016321 ENSBGRG00000016372 ENSBGRG00000016450 ##22 CDH20 (ENSBGRG00000016472) RNF152 (ENSBGRG00000016707) PIGN (ENSBGRG00000016802) RELCH (ENSBGRG00000017550) TNFRSF11A (ENSBGRG00000018261) ZCCHC2 (ENSBGRG00000018501) BCL2 (ENSBGRG00000019339) ENSBGRG00000019385 KDSR (ENSBGRG00000019413) VPS4B (ENSBGRG00000019724) SERPINB5 (ENSBGRG00000019802) SERPINB12 (ENSBGRG00000019909) SERPINB13 (ENSBGRG00000019989) ENSBGRG00000020145 ENSBGRG00000020306 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a.ab ##22 Rambouillet Sheep MODERN SPECIES SLC30A7 (ENSOARG00020002437) DPH5 (ENSOARG00020002452) S1PR1 (ENSOARG00020002463) OLFM3 (ENSOARG00020002515) ENSOARG00020002578 ENSOARG00020002593 COL11A1 (ENSOARG00020002671) RNPC3 (ENSOARG00020002937) ENSOARG00020002996 ENSOARG00020003021 ENSOARG00020003035 ENSOARG00020003049 ENSOARG00020003080 PRMT6 (ENSOARG00020003104) NTNG1 (ENSOARG00020003145) ENSOARG00020003390 ##22 VAV3 (ENSOARG00020003474) SLC25A24 (ENSOARG00020004405) ENSOARG00020004488 ENSOARG00020004503 ENSOARG00020004531 EEIG2 (ENSOARG00020004584) HENMT1 (ENSOARG00020004673) ENSOARG00020004727 FNDC7 (ENSOARG00020004796) STXBP3 (ENSOARG00020004855) ENSOARG00020004923 GPSM2 (ENSOARG00020004956) CLCC1 (ENSOARG00020005063) WDR47 (ENSOARG00020005109) TAF13 (ENSOARG00020005265) Goat MODERN SPECIES 23 WDR91 (ENSCHIG00000014156) CYREN (ENSCHIG00000019318) TMEM140 (ENSCHIG00000025483) AGBL3 (ENSCHIG00000015475) CALD1 (ENSCHIG00000021959) BPGM (ENSCHIG00000015001) ENSCHIG00000008971 AKR1B1 (ENSCHIG00000012061) SLC35B4 (ENSCHIG00000017132) ENSCHIG00000017125 ENSCHIG00000025857 LRGUK (ENSCHIG00000014837) ENSCHIG00000024010 ENSCHIG00000012890 ENSCHIG00000018200 ENSCHIG00000001384 ##22 CHCHD3 (ENSCHIG00000014420) ENSCHIG00000021946 ENSCHIG00000012838 ENSCHIG00000013016 MKLN1 (ENSCHIG00000023032) ENSCHIG00000010380 KLF14 (ENSCHIG00000009851) ENSCHIG00000010301 TSGA13 (ENSCHIG00000022234) COPG2 (ENSCHIG00000010306) MEST (ENSCHIG00000025507) CEP41 (ENSCHIG00000015511) CPA1 (ENSCHIG00000009711) CPA5 (ENSCHIG00000016698) CPA4 (ENSCHIG00000022208) Cetacea ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00950000182992.a.b.a.a ENSGT00940000163796 ENSGT00940000157736 ENSGT00390000003107.a ENSGT00950000183024.a.a.b ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333.c.a.b ENSGT00940000160736 ENSGT00440000039029 ENSGT00390000006205.a ENSGT00950000183095.a.b.a.b.b ENSGT00940000159330 ENSGT00390000017627.a ENSGT00940000160910 ENSGT00940000153786.e.a.a ##22 ENSGT00440000037341.a ENSGT00940000158843 ENSGT00940000155823.B ENSGT00900000143268 ENSGT00500000044929 ENSGT00940000156126 ENSGT00940000153168.B ENSGT00940000161744 ENSGT00940000159934 ENSGT00940000156258 ENSGT01050000245125 ENSGT00390000008808.k.b ENSGT00390000006408 ENSGT00950000182886.b.a ENSGT00950000183114.a.a Vaquita MODERN SPECIES 4 ENSPSNG00000014732 ENSPSNG00000014638 QPCT (ENSPSNG00000014580) PRKD3 (ENSPSNG00000014466) NDUFAF7 (ENSPSNG00000014303) CEBPZ (ENSPSNG00000014215) ENSPSNG00000014144 EIF2AK2 (ENSPSNG00000014066) GPATCH11 (ENSPSNG00000013915) HEATR5B (ENSPSNG00000013725) ENSPSNG00000013636 STRN (ENSPSNG00000013377) VIT (ENSPSNG00000012296) FEZ2 (ENSPSNG00000012023) CRIM1 (ENSPSNG00000011956) ENSPSNG00000011915 ##22 FAM98A (ENSPSNG00000011836) RASGRP3 (ENSPSNG00000011512) LTBP1 (ENSPSNG00000011444) ENSPSNG00000011375 TTC27 (ENSPSNG00000011309) BIRC6 (ENSPSNG00000010538) YIPF4 (ENSPSNG00000010425) NLRC4 (ENSPSNG00000010270) SLC30A6 (ENSPSNG00000009965) SPAST (ENSPSNG00000009453) ENSPSNG00000009369 ENSPSNG00000009336 MEMO1 (ENSPSNG00000009278) SRD5A2 (ENSPSNG00000009206) XDH (ENSPSNG00000009052) Monodontidae ANCESTRAL SPECIES 13 ENSGT00950000182992.a.b.a.a ENSGT00940000163796 ENSGT00940000157736 ENSGT00390000003107.a ENSGT00950000183024.a.a.b ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333.c.a.b ENSGT00940000160736 ENSGT00440000039029 ENSGT00390000006205.a ENSGT00950000183095.a.b.a.b.b ENSGT00940000159330 ENSGT00390000017627.a ENSGT00940000160910 ENSGT00940000153786.e.a.a ##22 ENSGT00440000037341.a ENSGT00940000158843 ENSGT00940000155823.B ENSGT00500000044929 ENSGT00940000156126 ENSGT00390000002517.b.gb.b ENSGT00940000153168.B ENSGT00940000161744 ENSGT00940000159934 ENSGT00940000156258 ENSGT01050000245125 ENSGT00390000008808.k.b ENSGT00390000006408 ENSGT00950000182886.b.a ENSGT00950000183114.a.a Beluga whale MODERN SPECIES 1 SENP6 (ENSDLEG00000002695) MYO6 (ENSDLEG00000002587) IMPG1 (ENSDLEG00000002533) HTR1B (ENSDLEG00000002516) ENSDLEG00000002506 IRAK1BP1 (ENSDLEG00000002494) PHIP (ENSDLEG00000001386) HMGN3 (ENSDLEG00000001251) LCA5 (ENSDLEG00000001234) ENSDLEG00000001213 ELOVL4 (ENSDLEG00000001200) TTK (ENSDLEG00000001116) BCKDHB (ENSDLEG00000001062) ENSDLEG00000001032 FAM46A (ENSDLEG00000001008) ENSDLEG00000000996 ##22 IBTK (ENSDLEG00000000959) TPBG (ENSDLEG00000000941) UBE3D (ENSDLEG00000000890) DOPEY1 (ENSDLEG00000000629) PGM3 (ENSDLEG00000000530) RWDD2A (ENSDLEG00000000501) ME1 (ENSDLEG00000000460) PRSS35 (ENSDLEG00000000446) SNAP91 (ENSDLEG00000000330) RIPPLY2 (ENSDLEG00000000290) CYB5R4 (ENSDLEG00000000201) ENSDLEG00000000165 Narwhal DUPLICATION Narwhal MODERN SPECIES 301 IMPG1 (ENSMMNG00015021769) HTR1B (ENSMMNG00015021791) MEI4 (ENSMMNG00015021797) ENSMMNG00015021804 IRAK1BP1 (ENSMMNG00015021809) PHIP (ENSMMNG00015021816) HMGN3 (ENSMMNG00015021834) LCA5 (ENSMMNG00015021836) ENSMMNG00015021842 ELOVL4 (ENSMMNG00015021845) TTK (ENSMMNG00015021853) BCKDHB (ENSMMNG00015021866) ENSMMNG00015021875 PIP4P2 (ENSMMNG00015021881) TENT5A (ENSMMNG00015021884) ENSMMNG00015021890 ##22 IBTK (ENSMMNG00015021895) TPBG (ENSMMNG00015021904) UBE3D (ENSMMNG00015021906) DOP1A (ENSMMNG00015021912) PGM3 (ENSMMNG00015021925) RWDD2A (ENSMMNG00015021927) ME1 (ENSMMNG00015021928) PRSS35 (ENSMMNG00015021929) SNAP91 (ENSMMNG00015021930) RIPPLY2 (ENSMMNG00015021932) CYB5R4 (ENSMMNG00015021934) MRAP2 (ENSMMNG00015021935) CEP162 (ENSMMNG00015021936) TBX18 (ENSMMNG00015021939) ENSMMNG00015021941 Narwhal MODERN SPECIES 305 ENSMMNG00015014851 ENSMMNG00015014923 QPCT (ENSMMNG00015014929) PRKD3 (ENSMMNG00015014946) NDUFAF7 (ENSMMNG00015014964) CEBPZ (ENSMMNG00015014996) ENSMMNG00015015023 EIF2AK2 (ENSMMNG00015015049) GPATCH11 (ENSMMNG00015015092) HEATR5B (ENSMMNG00015015126) STRN (ENSMMNG00015015159) ENSMMNG00015015212 VIT (ENSMMNG00015015229) FEZ2 (ENSMMNG00015015286) CRIM1 (ENSMMNG00015015317) ENSMMNG00015015356 ##22 FAM98A (ENSMMNG00015015369) RASGRP3 (ENSMMNG00015015385) LTBP1 (ENSMMNG00015015497) ENSMMNG00015015816 TTC27 (ENSMMNG00015015868) BIRC6 (ENSMMNG00015015992) ENSMMNG00015016269 YIPF4 (ENSMMNG00015016292) NLRC4 (ENSMMNG00015016321) SLC30A6 (ENSMMNG00015016413) SPAST (ENSMMNG00015016548) ENSMMNG00015016723 ENSMMNG00015016745 ENSMMNG00015016779 MEMO1 (ENSMMNG00015016827) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Felidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Panthera ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 lion MODERN SPECIES 12 ENSPLOG00000011061 DHX37 (ENSPLOG00000011285) #8 BRI3BP (ENSPLOG00000012374) #9 AACS (ENSPLOG00000012418) #10 ENSPLOG00000012511 #11 ENSPLOG00000012561 ENSPLOG00000012606 TMEM132C (ENSPLOG00000012650) #14 SLC15A4 (ENSPLOG00000012734) #15 GLT1D1 (ENSPLOG00000012837) #16 TMEM132D (ENSPLOG00000013066) #17 FZD10 (ENSPLOG00000013193) #18 PIWIL1 (ENSPLOG00000013210) #19 RIMBP2 (ENSPLOG00000013382) #20 STX2 (ENSPLOG00000013734) #21 ENSPLOG00000013798 ##22 ADGRD1 (ENSPLOG00000013877) #23 Caniformia ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 American mink MODERN SPECIES 302 SMIM31 (ENSNVIG00000022894) ENSNVIG00000022896 ENSNVIG00000022900 ENSNVIG00000022901 ENSNVIG00000022904 ENSNVIG00000022908 TRIM60 (ENSNVIG00000022910) ENSNVIG00000022911 TRIM75 (ENSNVIG00000022919) ENSNVIG00000022921 KLHL2 (ENSNVIG00000022925) MSMO1 (ENSNVIG00000022952) ENSNVIG00000022957 ##22 CPE (ENSNVIG00000022960) TLL1 (ENSNVIG00000022963) SPOCK3 (ENSNVIG00000022984) Ursidae ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Ursus ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Polar bear MODERN SPECIES 170 SELENOF (ENSUMAG00000001679) HS2ST1 (ENSUMAG00000001671) ENSUMAG00000001654 LMO4 (ENSUMAG00000001651) ENSUMAG00000001612 PKN2 (ENSUMAG00000001596) GTF2B (ENSUMAG00000001587) KYAT3 (ENSUMAG00000001577) GBP1 (ENSUMAG00000001567) GBP5 (ENSUMAG00000001557) ENSUMAG00000001534 LRRC8B (ENSUMAG00000001521) LRRC8C (ENSUMAG00000001510) ENSUMAG00000001494 ZNF326 (ENSUMAG00000001464) ENSUMAG00000001451 ##22 BARHL2 (ENSUMAG00000001411) ZNF644 (ENSUMAG00000001401) ENSUMAG00000001345 CDC7 (ENSUMAG00000001109) TGFBR3 (ENSUMAG00000001066) Atlantogenata ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153786.e.a.a ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 4012 ENSDNOG00000041077 ENSDNOG00000038224 IGSF11 (ENSDNOG00000030757) RETNLB (ENSDNOG00000009661) TRAT1 (ENSDNOG00000041323) MORC1 (ENSDNOG00000006122) ENSDNOG00000009346 ENSDNOG00000031679 ##22 Armadillo MODERN SPECIES 3081 ENSDNOG00000049495 ENSDNOG00000048457 ENSDNOG00000032769 ENSDNOG00000041719 ENSDNOG00000038653 ENSDNOG00000049440 ENSDNOG00000044752 ENSDNOG00000030907 ENSDNOG00000037388 ENSDNOG00000047407 PHTF2 (ENSDNOG00000013570) ENSDNOG00000035710 TMEM60 (ENSDNOG00000004243) ENSDNOG00000003023 PTPN12 (ENSDNOG00000031767) ENSDNOG00000040281 ##22 GSAP (ENSDNOG00000007203) CCDC146 (ENSDNOG00000011336) FGL2 (ENSDNOG00000038302) FAM185A (ENSDNOG00000035713) FBXL13 (ENSDNOG00000015280) LRRC17 (ENSDNOG00000048906) Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Mas night monkey MODERN SPECIES 940 RAMP1 (ENSANAG00000036130) RBM44 (ENSANAG00000037356) ENSANAG00000021311 ENSANAG00000037953 PRLH (ENSANAG00000030046) MLPH (ENSANAG00000037808) COL6A3 (ENSANAG00000020236) COPS8 (ENSANAG00000036385) ACKR3 (ENSANAG00000008341) IQCA1 (ENSANAG00000014576) ASB18 (ENSANAG00000038140) GBX2 (ENSANAG00000028606) AGAP1 (ENSANAG00000033262) ENSANAG00000019899 ##22 ENSANAG00000036206 ARL4C (ENSANAG00000038361) SPP2 (ENSANAG00000037484) TRPM8 (ENSANAG00000026214) ENSANAG00000026908 HJURP (ENSANAG00000026897) ENSANAG00000035564 USP40 (ENSANAG00000036897) DGKD (ENSANAG00000033065) SAG (ENSANAG00000026665) ATG16L1 (ENSANAG00000035256) INPP5D (ENSANAG00000036916) NEU2 (ENSANAG00000037129) NGEF (ENSANAG00000024538) SNORC (ENSANAG00000021552) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Giant Panda MODERN SPECIES 1635 ENSAMEG00000029291 ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Pecora ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Siberian musk deer MODERN SPECIES 511 ENSMMSG00000005386 ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Tenrec MODERN SPECIES 13693 ENSETEG00000009112 ##22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.a ##22 Armadillo MODERN SPECIES 927 ENSDNOG00000007243 HDAC3 (ENSDNOG00000008318) RELL2 (ENSDNOG00000047431) FCHSD1 (ENSDNOG00000043146) ARAP3 (ENSDNOG00000008355) PCDH1 (ENSDNOG00000039222) DELE1 (ENSDNOG00000002303) PCDH12 (ENSDNOG00000035553) ENSDNOG00000000698 GNPDA1 (ENSDNOG00000007804) NDFIP1 (ENSDNOG00000002760) SPRY4 (ENSDNOG00000039808) FGF1 (ENSDNOG00000018018) ARHGAP26 (ENSDNOG00000000580) NR3C1 (ENSDNOG00000010685) ENSDNOG00000043895 ##22 ENSDNOG00000014497 ENSDNOG00000006671 ENSDNOG00000035490 ENSDNOG00000041216 ENSDNOG00000045708 Eutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Squirrel MODERN SPECIES 260 TMEM132C (ENSSTOG00000025143) #14 GLT1D1 (ENSSTOG00000015049) #16 FZD10 (ENSSTOG00000021154) #18 PIWIL1 (ENSSTOG00000005154) #19 RIMBP2 (ENSSTOG00000006781) #20 STX2 (ENSSTOG00000009546) #21 RAN (ENSSTOG00000003992) ##22 ADGRD1 (ENSSTOG00000004009) #23 SFSWAP (ENSSTOG00000000773) #25 MMP17 (ENSSTOG00000004804) #26 ULK1 (ENSSTOG00000011200) #27 PUS1 (ENSSTOG00000011245) #28 EP400 (ENSSTOG00000011461) #29 DDX51 (ENSSTOG00000023762) #30 NOC4L (ENSSTOG00000022612) #31 ENSSTOG00000029271 #32 ENSSTOG00000007820 #32 ENSSTOG00000034937 ENSSTOG00000025107 #33 P2RX2 (ENSSTOG00000022177) #35 POLE (ENSSTOG00000022311) #36 PXMP2 (ENSSTOG00000010249) #37 Primates ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Mas night monkey MODERN SPECIES 670 ENSANAG00000027562 MTX3 (ENSANAG00000022724) ENSANAG00000027590 CMYA5 (ENSANAG00000027112) TENT2 (ENSANAG00000023910) HOMER1 (ENSANAG00000035206) ENSANAG00000032876 JMY (ENSANAG00000022714) ENSANAG00000019851 BHMT (ENSANAG00000023575) DMGDH (ENSANAG00000019881) ENSANAG00000019436 ARSB (ENSANAG00000028965) LHFPL2 (ENSANAG00000021404) SCAMP1 (ENSANAG00000023081) ENSANAG00000036326 ##22 AP3B1 (ENSANAG00000035703) ENSANAG00000035527 OTP (ENSANAG00000029433) WDR41 (ENSANAG00000004152) PDE8B (ENSANAG00000031594) AGGF1 (ENSANAG00000023021) CRHBP (ENSANAG00000022343) ENSANAG00000028007 S100Z (ENSANAG00000027821) F2RL1 (ENSANAG00000021399) F2R (ENSANAG00000020328) F2RL2 (ENSANAG00000019493) IQGAP2 (ENSANAG00000027336) ENSANAG00000023009 SV2C (ENSANAG00000020779) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 American mink MODERN SPECIES 580 ENSNVIG00000016452 ##22 ENSNVIG00000016436 Atlantogenata ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Tenrec MODERN SPECIES 13424 ENSETEG00000011875 ##22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153786.e.b.a.b ##22 Sloth MODERN SPECIES 11070 RAN (ENSCHOG00000011684) ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Glires ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Rodentia ANCESTRAL SPECIES 20 ENSGT00940000163900 ENSGT00940000163680.w.b ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.a.b #22 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Rodentia_B ANCESTRAL SPECIES 22 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Myomorpha ANCESTRAL SPECIES 30 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Lesser Egyptian jerboa MODERN SPECIES 162 ENSJJAG00000012393 Tmem132c (ENSJJAG00000014015) #14 Slc15a4 (ENSJJAG00000014620) #15 Glt1d1 (ENSJJAG00000020231) #16 Tmem132d (ENSJJAG00000021878) #17 Fzd10 (ENSJJAG00000012434) #18 Piwil1 (ENSJJAG00000022411) #19 Rimbp2 (ENSJJAG00000023645) #20 Stx2 (ENSJJAG00000010700) #21 Ran (ENSJJAG00000012009) ##22 Adgrd1 (ENSJJAG00000014453) #23 ENSJJAG00000024181 ENSJJAG00000000172 Sfswap (ENSJJAG00000006609) #25 Mmp17 (ENSJJAG00000010485) #26 Ulk1 (ENSJJAG00000016623) #27 Pus1 (ENSJJAG00000000088) #28 Ep400 (ENSJJAG00000016406) #29 ENSJJAG00000012370 ENSJJAG00000019589 #30 Noc4l (ENSJJAG00000020377) #31 Galnt9 (ENSJJAG00000022977) #32 ENSJJAG00000019634 Fbrsl1 (ENSJJAG00000022073) #33 ENSJJAG00000023325 #34 Muroidea ANCESTRAL SPECIES 28 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1669 Tmem132c (ENSNGAG00000013028) #14 Slc15a4 (ENSNGAG00000011585) #15 Glt1d1 (ENSNGAG00000020630) #16 Tmem132d (ENSNGAG00000018062) #17 Fzd10 (ENSNGAG00000017545) #18 Piwil1 (ENSNGAG00000017950) #19 Rimbp2 (ENSNGAG00000003104) #20 Stx2 (ENSNGAG00000017463) #21 Ran (ENSNGAG00000012188) ##22 Adgrd1 (ENSNGAG00000020745) #23 Sfswap (ENSNGAG00000018167) #25 Mmp17 (ENSNGAG00000014099) #26 Ulk1 (ENSNGAG00000007610) #27 Pus1 (ENSNGAG00000012976) #28 Ep400 (ENSNGAG00000019530) #29 Ddx51 (ENSNGAG00000020870) #30 Noc4l (ENSNGAG00000002758) #31 Galnt9 (ENSNGAG00000020491) #32 ENSNGAG00000018393 #33 Lrcol1 (ENSNGAG00000001066) #34 P2rx2 (ENSNGAG00000000314) #35 Pole (ENSNGAG00000018022) #36 Pgam5 (ENSNGAG00000007440) Ankle2 (ENSNGAG00000017869) Muroidea_A ANCESTRAL SPECIES 21 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Murinae ANCESTRAL SPECIES 20 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Rat MODERN SPECIES 3 Dhx37 (ENSRNOG00000022171) #8 Bri3bp (ENSRNOG00000063640) #9 Aacs (ENSRNOG00000000967) #10 Tmem132b (ENSRNOG00000038406) #11 Frg1l1 (ENSRNOG00000000964) RGD1559821 (ENSRNOG00000008521) Tmem132c (ENSRNOG00000000963) #14 Slc15a4 (ENSRNOG00000000962) #15 Glt1d1 (ENSRNOG00000000961) #16 Tmem132d (ENSRNOG00000008447) #17 Fzd10 (ENSRNOG00000022784) #18 ENSRNOG00000066445 Piwil1 (ENSRNOG00000000934) #19 Rimbp2 (ENSRNOG00000022893) #20 Stx2 (ENSRNOG00000000936) #21 Ran (ENSRNOG00000000938) ##22 Adgrd1 (ENSRNOG00000023536) #23 Sfswap (ENSRNOG00000000931) #25 Mmp17 (ENSRNOG00000023643) #26 Zfp11 (ENSRNOG00000051442) ENSRNOG00000067900 Septin14 (ENSRNOG00000038495) Mrps17 (ENSRNOG00000000926) Mrps17 (ENSRNOG00000066020) Nipsnap2 (ENSRNOG00000023919) Psph (ENSRNOG00000000925) Cct6a (ENSRNOG00000000923) Sumf2 (ENSRNOG00000000922) Phkg1 (ENSRNOG00000000920) Chchd2l1 (ENSRNOG00000065713) Chchd2l2 (ENSRNOG00000000918) Mus ANCESTRAL SPECIES 17 ENSGT00940000153372.B ENSGT00940000163355 ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Shrew mouse MODERN SPECIES 15 Ncor2 (MGP_PahariEiJ_G0024343) Scarb1 (MGP_PahariEiJ_G0024344) MGP_PahariEiJ_G0024345 Dhx37 (MGP_PahariEiJ_G0024346) #8 Bri3bp (MGP_PahariEiJ_G0024347) #9 Aacs (MGP_PahariEiJ_G0024348) #10 Tmem132b (MGP_PahariEiJ_G0024349) #11 Tmem132c (MGP_PahariEiJ_G0024350) #14 Slc15a4 (MGP_PahariEiJ_G0024351) #15 Glt1d1 (MGP_PahariEiJ_G0024352) #16 Tmem132d (MGP_PahariEiJ_G0024353) #17 Fzd10 (MGP_PahariEiJ_G0024354) #18 Piwil1 (MGP_PahariEiJ_G0024355) #19 Rimbp2 (MGP_PahariEiJ_G0024356) #20 Stx2 (MGP_PahariEiJ_G0024357) #21 Ran (MGP_PahariEiJ_G0024358) ##22 Adgrd1 (MGP_PahariEiJ_G0024359) #23 Sfswap (MGP_PahariEiJ_G0024360) #25 Mmp17 (MGP_PahariEiJ_G0024361) #26 Zfp11 (MGP_PahariEiJ_G0024362) Septin14 (MGP_PahariEiJ_G0024363) MGP_PahariEiJ_G0024364 MGP_PahariEiJ_G0024365 Eln (MGP_PahariEiJ_G0024366) Limk1 (MGP_PahariEiJ_G0024367) Eif4h (MGP_PahariEiJ_G0024368) Lat2 (MGP_PahariEiJ_G0024369) Rfc2 (MGP_PahariEiJ_G0024370) Syna (MGP_PahariEiJ_G0024371) Clip2 (MGP_PahariEiJ_G0024372) Gtf2ird1 (MGP_PahariEiJ_G0024373) Mus_A ANCESTRAL SPECIES 6 ENSGT00940000153372.B ENSGT00940000163355 ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Ryukyu mouse MODERN SPECIES 14 Ncor2 (MGP_CAROLIEiJ_G0027763) Scarb1 (MGP_CAROLIEiJ_G0027764) MGP_CAROLIEiJ_G0027765 Dhx37 (MGP_CAROLIEiJ_G0027766) #8 Bri3bp (MGP_CAROLIEiJ_G0027767) #9 Aacs (MGP_CAROLIEiJ_G0027768) #10 Tmem132b (MGP_CAROLIEiJ_G0027769) #11 Tmem132c (MGP_CAROLIEiJ_G0027770) #14 Slc15a4 (MGP_CAROLIEiJ_G0027771) #15 Glt1d1 (MGP_CAROLIEiJ_G0027772) #16 Tmem132d (MGP_CAROLIEiJ_G0027773) #17 Fzd10 (MGP_CAROLIEiJ_G0027774) #18 Piwil1 (MGP_CAROLIEiJ_G0027775) #19 Rimbp2 (MGP_CAROLIEiJ_G0027776) #20 Stx2 (MGP_CAROLIEiJ_G0027777) #21 Ran (MGP_CAROLIEiJ_G0027778) ##22 Adgrd1 (MGP_CAROLIEiJ_G0027779) #23 Sfswap (MGP_CAROLIEiJ_G0027780) #25 Mmp17 (MGP_CAROLIEiJ_G0027781) #26 Zfp11 (MGP_CAROLIEiJ_G0027782) Septin14 (MGP_CAROLIEiJ_G0027783) Mrps17 (MGP_CAROLIEiJ_G0027784) Nipsnap2 (MGP_CAROLIEiJ_G0027785) Psph (MGP_CAROLIEiJ_G0027786) MGP_CAROLIEiJ_G0027787 Phkg1 (MGP_CAROLIEiJ_G0027788) Chchd2 (MGP_CAROLIEiJ_G0027789) Zbed5 (MGP_CAROLIEiJ_G0027790) Nupr1l (MGP_CAROLIEiJ_G0027791) Vkorc1l1 (MGP_CAROLIEiJ_G0027792) Gusb (MGP_CAROLIEiJ_G0027793) Mus_B ANCESTRAL SPECIES 4 ENSGT00940000153372.B ENSGT00940000163355 ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631.u.a ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 Mouse MODERN SPECIES 14 Ncor2 (ENSMUSG00000029478) Scarb1 (ENSMUSG00000037936) Ubc (ENSMUSG00000008348) Dhx37 (ENSMUSG00000029480) #8 Bri3bp (ENSMUSG00000037905) #9 Aacs (ENSMUSG00000029482) #10 Tmem132b (ENSMUSG00000070498) #11 Tmem132c (ENSMUSG00000034324) #14 Slc15a4 (ENSMUSG00000029416) #15 Glt1d1 (ENSMUSG00000049971) #16 Tmem132d (ENSMUSG00000034310) #17 Fzd10 (ENSMUSG00000081683) #18 Piwil1 (ENSMUSG00000029423) #19 Rimbp2 (ENSMUSG00000029420) #20 Stx2 (ENSMUSG00000029428) #21 Ran (ENSMUSG00000029430) ##22 Adgrd1 (ENSMUSG00000044017) #23 Sfswap (ENSMUSG00000029439) #25 Mmp17 (ENSMUSG00000029436) #26 Zfp11 (ENSMUSG00000051034) Septin14 (ENSMUSG00000034219) Mrps17 (ENSMUSG00000034211) Nipsnap2 (ENSMUSG00000029432) Psph (ENSMUSG00000029446) Cct6a (ENSMUSG00000029447) Sumf2 (ENSMUSG00000025538) Phkg1 (ENSMUSG00000025537) Chchd2 (ENSMUSG00000070493) Zbed5 (ENSMUSG00000034173) Nupr1l (ENSMUSG00000095789) Vkorc1l1 (ENSMUSG00000066735) Mus_C ANCESTRAL SPECIES 4 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163355 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000163308 ENSGT00940000161752 ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000162897 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000160807 ENSGT00530000064242.b ENSGT00940000157044 ENSGT00390000001752 Steppe mouse MODERN SPECIES 3421 Dhx37 (ENSMSIG00000006064) #8 Bri3bp (ENSMSIG00000006042) #9 Aacs (ENSMSIG00000005957) #10 Tmem132b (ENSMSIG00000005925) #11 ENSMSIG00000005895 ENSMSIG00000005862 Tmem132c (ENSMSIG00000005800) #14 Slc15a4 (ENSMSIG00000005724) #15 Glt1d1 (ENSMSIG00000005663) #16 Tmem132d (ENSMSIG00000005635) #17 ENSMSIG00000005623 Fzd10 (ENSMSIG00000005616) #18 Piwil1 (ENSMSIG00000005565) #19 Rimbp2 (ENSMSIG00000005336) #20 Stx2 (ENSMSIG00000005267) #21 Ran (ENSMSIG00000005235) ##22 Adgrd1 (ENSMSIG00000004908) #23 Sfswap (ENSMSIG00000004800) #25 Mmp17 (ENSMSIG00000004769) #26 Septin14 (ENSMSIG00000004730) Mrps17 (ENSMSIG00000004696) Nipsnap2 (ENSMSIG00000004670) Psph (ENSMSIG00000004642) Primates ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Bushbaby MODERN SPECIES 365 FZD10 (ENSOGAG00000015914) #18 PIWIL1 (ENSOGAG00000015400) #19 RIMBP2 (ENSOGAG00000015405) #20 ENSOGAG00000011326 #21 RAN (ENSOGAG00000025046) ##22 ENSOGAG00000029866 ADGRD1 (ENSOGAG00000012763) #23 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Bolivian squirrel monkey MODERN SPECIES 131 RFLNA (ENSSBOG00000030476) NCOR2 (ENSSBOG00000026657) SCARB1 (ENSSBOG00000001529) DHX37 (ENSSBOG00000026565) #8 BRI3BP (ENSSBOG00000019597) #9 AACS (ENSSBOG00000018961) #10 TMEM132B (ENSSBOG00000027953) #11 ENSSBOG00000025480 TMEM132C (ENSSBOG00000024777) #14 SLC15A4 (ENSSBOG00000027729) #15 GLT1D1 (ENSSBOG00000020576) #16 TMEM132D (ENSSBOG00000023792) #17 PIWIL1 (ENSSBOG00000033094) #19 RIMBP2 (ENSSBOG00000022235) #20 STX2 (ENSSBOG00000034091) #21 RAN (ENSSBOG00000024368) ##22 ADGRD1 (ENSSBOG00000033099) #23 SFSWAP (ENSSBOG00000026217) #25 MMP17 (ENSSBOG00000025163) #26 ULK1 (ENSSBOG00000029125) #27 PUS1 (ENSSBOG00000023593) #28 EP400 (ENSSBOG00000029372) #29 ENSSBOG00000020213 ##29 DDX51 (ENSSBOG00000018712) #30 NOC4L (ENSSBOG00000031768) #31 GALNT9 (ENSSBOG00000029934) #32 FBRSL1 (ENSSBOG00000027133) #33 LRCOL1 (ENSSBOG00000024088) #34 P2RX2 (ENSSBOG00000022046) #35 POLE (ENSSBOG00000032511) #36 ENSSBOG00000027044 Catarrhini ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Rhinopithecus ANCESTRAL SPECIES 479 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 Golden snub-nosed monkey MODERN SPECIES 2981 FZD10 (ENSRROG00000040681) #18 PIWIL1 (ENSRROG00000030794) #19 RIMBP2 (ENSRROG00000036099) #20 STX2 (ENSRROG00000017125) #21 RAN (ENSRROG00000045069) ##22 ADGRD1 (ENSRROG00000035751) #23 Hominoidea ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044.u.a #10 ENSGT00940000159630 #11 ENSGT00910000147049 ENSGT00910000146865 ENSGT00490000044601 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764.jb #29 ENSGT00940000154764.kb ##29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00860000135724 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Pan ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Bonobo MODERN SPECIES 3 DHX37 (ENSPPAG00000013771) #8 ENSPPAG00000013098 #9 AACS (ENSPPAG00000014412) #10 TMEM132B (ENSPPAG00000037819) #11 ENSPPAG00000037704 ENSPPAG00000037727 ENSPPAG00000028862 TMEM132C (ENSPPAG00000033366) #14 ENSPPAG00000039123 #15 GLT1D1 (ENSPPAG00000029793) #16 ENSPPAG00000015338 PIWIL1 (ENSPPAG00000018598) #19 ENSPPAG00000029097 ENSPPAG00000037701 #20 STX2 (ENSPPAG00000030654) #21 RAN (ENSPPAG00000030974) ##22 ADGRD1 (ENSPPAG00000018888) #23 ENSPPAG00000030229 #24 ENSPPAG00000032327 SFSWAP (ENSPPAG00000036706) #25 MMP17 (ENSPPAG00000029938) #26 ENSPPAG00000043077 #27 PUS1 (ENSPPAG00000040971) #28 EP400 (ENSPPAG00000041418) #29 ENSPPAG00000028805 ##29 DDX51 (ENSPPAG00000028768) #30 NOC4L (ENSPPAG00000042504) #31 GALNT9 (ENSPPAG00000044024) #32 ENSPPAG00000041373 ENSPPAG00000014516 #33 ENSPPAG00000042816 #34 Human MODERN SPECIES 3 NCOR2 (ENSG00000196498) SCARB1 (ENSG00000073060) UBC (ENSG00000150991) DHX37 (ENSG00000150990) #8 BRI3BP (ENSG00000184992) #9 AACS (ENSG00000081760) #10 TMEM132B (ENSG00000139364) #11 TMEM132C (ENSG00000181234) #14 SLC15A4 (ENSG00000139370) #15 GLT1D1 (ENSG00000151948) #16 TMEM132D (ENSG00000151952) #17 FZD10 (ENSG00000111432) #18 PIWIL1 (ENSG00000125207) #19 RIMBP2 (ENSG00000060709) #20 STX2 (ENSG00000111450) #21 RAN (ENSG00000132341) ##22 ADGRD1 (ENSG00000111452) #23 SFSWAP (ENSG00000061936) #25 MMP17 (ENSG00000198598) #26 ULK1 (ENSG00000177169) #27 PUS1 (ENSG00000177192) #28 EP400 (ENSG00000183495) #29 DDX51 (ENSG00000185163) #30 NOC4L (ENSG00000184967) #31 GALNT9 (ENSG00000182870) #32 FBRSL1 (ENSG00000112787) #33 LRCOL1 (ENSG00000204583) #34 P2RX2 (ENSG00000187848) #35 POLE (ENSG00000177084) #36 PXMP2 (ENSG00000176894) #37 PGAM5 (ENSG00000247077) Gibbon DUPLICATION Gibbon MODERN SPECIES AACS (ENSNLEG00000002559) #10 TMEM132B (ENSNLEG00000002714) #11 ENSNLEG00000034043 ENSNLEG00000036195 ENSNLEG00000032665 ENSNLEG00000002724 TMEM132C (ENSNLEG00000008182) #14 SLC15A4 (ENSNLEG00000008193) #15 GLT1D1 (ENSNLEG00000008195) #16 TMEM132D (ENSNLEG00000008210) #17 FZD10 (ENSNLEG00000018703) #18 PIWIL1 (ENSNLEG00000008225) #19 ENSNLEG00000008265 #20 ENSNLEG00000035275 STX2 (ENSNLEG00000008275) #21 ENSNLEG00000008282 ##22 ADGRD1 (ENSNLEG00000008312) #23 ENSNLEG00000008383 #24 SFSWAP (ENSNLEG00000008386) #25 MMP17 (ENSNLEG00000008455) #26 ULK1 (ENSNLEG00000008460) #27 PUS1 (ENSNLEG00000008505) #28 EP400 (ENSNLEG00000008508) #29 ENSNLEG00000035444 ENSNLEG00000031082 ENSNLEG00000008548 #30 NOC4L (ENSNLEG00000008553) #31 ENSNLEG00000008568 #32 ENSNLEG00000027581 FBRSL1 (ENSNLEG00000008576) #33 LRCOL1 (ENSNLEG00000008583) #34 Gibbon MODERN SPECIES 12 C1QTNF7 (ENSNLEG00000016288) ENSNLEG00000016275 ENSNLEG00000030451 BOD1L1 (ENSNLEG00000016260) NKX3-2 (ENSNLEG00000016256) RAB28 (ENSNLEG00000016243) ENSNLEG00000030301 HS3ST1 (ENSNLEG00000016241) CLNK (ENSNLEG00000016205) ZNF518B (ENSNLEG00000027103) ENSNLEG00000031957 ENSNLEG00000031634 ENSNLEG00000016203 WDR1 (ENSNLEG00000016183) SLC2A9 (ENSNLEG00000034367) ENSNLEG00000029276 ##22 OTOP1 (ENSNLEG00000016176) TMEM128 (ENSNLEG00000035157) LYAR (ENSNLEG00000016149) ZBTB49 (ENSNLEG00000016142) ENSNLEG00000016136 STX18 (ENSNLEG00000016132) MSX1 (ENSNLEG00000016128) ENSNLEG00000030902 CYTL1 (ENSNLEG00000016118) ENSNLEG00000016106 EVC2 (ENSNLEG00000016102) ENSNLEG00000018956 EVC (ENSNLEG00000016101) CRMP1 (ENSNLEG00000016061) ENSNLEG00000032062 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Artiodactyla ANCESTRAL SPECIES 26 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Artiodactyla_a ANCESTRAL SPECIES 28 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Artiodactyla_b ANCESTRAL SPECIES 10 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 Cetacea ANCESTRAL SPECIES 11 ENSGT00940000153372.B ENSGT00940000163355 ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00390000004786.i.a ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Blue whale MODERN SPECIES 5 ENSBMSG00010021549 ENSBMSG00010021540 #7 DHX37 (ENSBMSG00010021531) #8 AACS (ENSBMSG00010021482) #10 ENSBMSG00010021465 ENSBMSG00010021457 #11 TMEM132C (ENSBMSG00010021439) #14 SLC15A4 (ENSBMSG00010021358) #15 GLT1D1 (ENSBMSG00010021285) #16 ENSBMSG00010021256 TMEM132D (ENSBMSG00010021245) #17 FZD10 (ENSBMSG00010021234) #18 PIWIL1 (ENSBMSG00010021203) #19 RIMBP2 (ENSBMSG00010021147) #20 STX2 (ENSBMSG00010021078) #21 RAN (ENSBMSG00010021046) ##22 ADGRD1 (ENSBMSG00010020825) #23 ENSBMSG00010020762 SFSWAP (ENSBMSG00010020673) #25 MMP17 (ENSBMSG00010020602) #26 ULK1 (ENSBMSG00010020468) #27 PUS1 (ENSBMSG00010020403) #28 EP400 (ENSBMSG00010020126) #29 DDX51 (ENSBMSG00010020060) #30 NOC4L (ENSBMSG00010020025) #31 GALNT9 (ENSBMSG00010019986) #32 FBRSL1 (ENSBMSG00010019948) #33 P2RX2 (ENSBMSG00010019888) #35 POLE (ENSBMSG00010019508) #36 PGAM5 (ENSBMSG00010019341) ANKLE2 (ENSBMSG00010019279) Odontoceti ANCESTRAL SPECIES 10 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00390000004786.i.a ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Sperm whale MODERN SPECIES 10 NCOR2 (ENSPCTG00005013606) SCARB1 (ENSPCTG00005015475) ENSPCTG00005015744 DHX37 (ENSPCTG00005015797) #8 BRI3BP (ENSPCTG00005015881) #9 AACS (ENSPCTG00005015918) #10 ENSPCTG00005015960 #11 ENSPCTG00005015982 TMEM132C (ENSPCTG00005016023) #14 GLT1D1 (ENSPCTG00005016180) #16 TMEM132D (ENSPCTG00005016630) #17 FZD10 (ENSPCTG00005016786) #18 PIWIL1 (ENSPCTG00005016814) #19 RIMBP2 (ENSPCTG00005017069) #20 STX2 (ENSPCTG00005017641) #21 RAN (ENSPCTG00005017837) ##22 ADGRD1 (ENSPCTG00005017936) #23 SFSWAP (ENSPCTG00005018877) #25 MMP17 (ENSPCTG00005018940) #26 ULK1 (ENSPCTG00005019076) #27 EP400 (ENSPCTG00005019227) #29 DDX51 (ENSPCTG00005019712) #30 GALNT9 (ENSPCTG00005019866) #32 FBRSL1 (ENSPCTG00005020044) #33 ENSPCTG00005020267 #34 P2RX2 (ENSPCTG00005020406) #35 POLE (ENSPCTG00005020575) #36 PXMP2 (ENSPCTG00005021066) #37 ENSPCTG00005021095 PGAM5 (ENSPCTG00005021119) ENSPCTG00005021170 Odontoceti_a ANCESTRAL SPECIES 9 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00390000004786.i.a ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Monodontidae ANCESTRAL SPECIES 8 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.y.b.a ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00390000004786.i.a ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Narwhal MODERN SPECIES 295 SCARB1 (ENSMMNG00015014988) ENSMMNG00015015007 DHX37 (ENSMMNG00015015022) #8 BRI3BP (ENSMMNG00015015066) #9 AACS (ENSMMNG00015015088) #10 ENSMMNG00015015117 #11 TMEM132C (ENSMMNG00015015135) #14 ENSMMNG00015015155 SLC15A4 (ENSMMNG00015015164) #15 GLT1D1 (ENSMMNG00015015179) #16 TMEM132D (ENSMMNG00015015201) #17 FZD10 (ENSMMNG00015015223) #18 PIWIL1 (ENSMMNG00015015239) #19 RIMBP2 (ENSMMNG00015015299) #20 STX2 (ENSMMNG00015015376) #21 RAN (ENSMMNG00015015432) ##22 ADGRD1 (ENSMMNG00015015463) #23 RAB5IF (ENSMMNG00015015525) SFSWAP (ENSMMNG00015015554) #25 MMP17 (ENSMMNG00015015624) #26 ULK1 (ENSMMNG00015015664) #27 PUS1 (ENSMMNG00015015730) #28 EP400 (ENSMMNG00015015803) #29 DDX51 (ENSMMNG00015016130) #30 NOC4L (ENSMMNG00015016300) #31 GALNT9 (ENSMMNG00015016380) #32 FBRSL1 (ENSMMNG00015016500) #33 ENSMMNG00015016734 #34 P2RX2 (ENSMMNG00015016782) #35 POLE (ENSMMNG00015016995) #36 PXMP2 (ENSMMNG00015017055) #37 Dolphin MODERN SPECIES 326 RAN (ENSTTRG00000012732) ##22 ADGRD1 (ENSTTRG00000012734) #23 Pecora ANCESTRAL SPECIES 14 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00730000111146.eb ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 28 ENSCHYG00000002998 ENSCHYG00000003005 DHX37 (ENSCHYG00000003023) #8 AACS (ENSCHYG00000003110) #10 TMEM132B (ENSCHYG00000003174) #11 ENSCHYG00000003193 TMEM132C (ENSCHYG00000003201) #14 SLC15A4 (ENSCHYG00000003214) #15 GLT1D1 (ENSCHYG00000003253) #16 ENSCHYG00000003296 TMEM132D (ENSCHYG00000003308) #17 FZD10 (ENSCHYG00000003337) #18 ENSCHYG00000003353 #19 ENSCHYG00000003371 RIMBP2 (ENSCHYG00000003429) #20 ENSCHYG00000003663 ##22 ADGRD1 (ENSCHYG00000003715) #23 SFSWAP (ENSCHYG00000003851) #25 MMP17 (ENSCHYG00000003971) #26 ULK1 (ENSCHYG00000004006) #27 PUS1 (ENSCHYG00000004091) #28 ENSCHYG00000004100 EP400 (ENSCHYG00000004120) #29 ENSCHYG00000004163 DDX51 (ENSCHYG00000004182) #30 NOC4L (ENSCHYG00000004225) #31 GALNT9 (ENSCHYG00000004257) #32 ENSCHYG00000004321 ENSCHYG00000004305 #33 ENSCHYG00000004333 #34 P2RX2 (ENSCHYG00000004367) #35 Yarkand deer MODERN SPECIES 20 NKAIN2 (ENSCHYG00000017013) ENSCHYG00000017243 TRDN (ENSCHYG00000017290) CLVS2 (ENSCHYG00000017543) SMPDL3A (ENSCHYG00000017607) FABP7 (ENSCHYG00000017696) ENSCHYG00000017801 SERINC1 (ENSCHYG00000018011) HSF2 (ENSCHYG00000018096) GJA1 (ENSCHYG00000018357) TBC1D32 (ENSCHYG00000018403) ENSCHYG00000019210 ENSCHYG00000019236 MAN1A1 (ENSCHYG00000019314) FAM184A (ENSCHYG00000019415) ENSCHYG00000019956 ##22 MCM9 (ENSCHYG00000019990) ASF1A (ENSCHYG00000020334) CEP85L (ENSCHYG00000020415) PLN (ENSCHYG00000020604) SLC35F1 (ENSCHYG00000020751) ENSCHYG00000020966 ENSCHYG00000021027 ENSCHYG00000021123 GOPC (ENSCHYG00000021189) DCBLD1 (ENSCHYG00000021744) ROS1 (ENSCHYG00000021945) ENSCHYG00000022426 RFX6 (ENSCHYG00000022453) FAM162B (ENSCHYG00000022579) KPNA5 (ENSCHYG00000022607) Percora_a ANCESTRAL SPECIES 17 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00730000111146.eb ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Siberian musk deer MODERN SPECIES 1175 ENSMMSG00000010922 #7 DHX37 (ENSMMSG00000010946) #8 BRI3BP (ENSMMSG00000010973) #9 AACS (ENSMMSG00000010999) #10 ENSMMSG00000011062 #11 ENSMMSG00000011099 TMEM132C (ENSMMSG00000011147) #14 SLC15A4 (ENSMMSG00000011189) #15 GLT1D1 (ENSMMSG00000011267) #16 TMEM132D (ENSMMSG00000011498) #17 ENSMMSG00000011537 FZD10 (ENSMMSG00000011540) #18 PIWIL1 (ENSMMSG00000011555) #19 RIMBP2 (ENSMMSG00000011639) #20 STX2 (ENSMMSG00000011809) #21 RAN (ENSMMSG00000011871) ##22 ADGRD1 (ENSMMSG00000011917) #23 ENSMMSG00000012171 SFSWAP (ENSMMSG00000012216) #25 MMP17 (ENSMMSG00000012370) #26 ENSMMSG00000012418 ULK1 (ENSMMSG00000012442) #27 PUS1 (ENSMMSG00000012504) #28 EP400 (ENSMMSG00000012568) #29 ENSMMSG00000012757 DDX51 (ENSMMSG00000012775) #30 NOC4L (ENSMMSG00000012810) #31 GALNT9 (ENSMMSG00000012870) #32 ENSMMSG00000012983 ENSMMSG00000012953 #33 ENSMMSG00000012990 #34 Bovidae ANCESTRAL SPECIES 17 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00730000111146.eb ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Caprinae ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Goat MODERN SPECIES 8 ENSCHIG00000011707 RAD9B (ENSCHIG00000015875) PPTC7 (ENSCHIG00000020162) TCTN1 (ENSCHIG00000012538) HVCN1 (ENSCHIG00000005085) PPP1CC (ENSCHIG00000014773) CCDC63 (ENSCHIG00000013104) MYL2 (ENSCHIG00000019988) CUX2 (ENSCHIG00000020521) PHETA1 (ENSCHIG00000009507) SH2B3 (ENSCHIG00000019037) ATXN2 (ENSCHIG00000012141) BRAP (ENSCHIG00000016757) ENSCHIG00000013174 ENSCHIG00000020055 ENSCHIG00000024132 ##22 CIT (ENSCHIG00000023632) PRKAB1 (ENSCHIG00000021381) TMEM233 (ENSCHIG00000006355) CCDC60 (ENSCHIG00000014462) HSPB8 (ENSCHIG00000015638) SRRM4 (ENSCHIG00000019151) SUDS3 (ENSCHIG00000012622) ENSCHIG00000017404 TAOK3 (ENSCHIG00000020285) ENSCHIG00000017044 ENSCHIG00000005694 VSIG10 (ENSCHIG00000017491) WSB2 (ENSCHIG00000011456) RFC5 (ENSCHIG00000016947) KSR2 (ENSCHIG00000023716) Bovinae ANCESTRAL SPECIES 13 ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00390000000703.h.wb.a.a.a ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00950000185329 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Bos ANCESTRAL SPECIES 14 ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00390000000703.h.wb.a.a.a ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00950000185329 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Bos_a ANCESTRAL SPECIES 14 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00390000000703.h.wb.a.a.a ENSGT00960000190359 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT01050000244956.b.h ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00950000185329 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 Wild yak MODERN SPECIES 391 STX2 (ENSBMUG00000000513) #21 RAN (ENSBMUG00000000447) ##22 ADGRD1 (ENSBMUG00000000395) #23 ENSBMUG00000000293 SFSWAP (ENSBMUG00000000284) #25 MMP17 (ENSBMUG00000000222) #26 Domestic yak MODERN SPECIES 7 BRI3BP (ENSBGRG00000011778) #9 AACS (ENSBGRG00000011225) #10 TMEM132B (ENSBGRG00000010977) #11 ENSBGRG00000010935 ENSBGRG00000010915 ENSBGRG00000010848 TMEM132C (ENSBGRG00000010667) #14 SLC15A4 (ENSBGRG00000010376) #15 ENSBGRG00000010348 GLT1D1 (ENSBGRG00000010135) #16 TMEM132D (ENSBGRG00000010027) #17 FZD10 (ENSBGRG00000010000) #18 PIWIL1 (ENSBGRG00000009726) #19 RIMBP2 (ENSBGRG00000009443) #20 STX2 (ENSBGRG00000009178) #21 RAN (ENSBGRG00000009117) ##22 ADGRD1 (ENSBGRG00000008471) #23 ENSBGRG00000008402 SFSWAP (ENSBGRG00000008209) #25 MMP17 (ENSBGRG00000008006) #26 ULK1 (ENSBGRG00000007587) #27 PUS1 (ENSBGRG00000007423) #28 EP400 (ENSBGRG00000006830) #29 ENSBGRG00000006719 #30 NOC4L (ENSBGRG00000006685) #31 GALNT9 (ENSBGRG00000006651) #32 FBRSL1 (ENSBGRG00000006440) #33 LRCOL1 (ENSBGRG00000006394) #34 ENSBGRG00000006340 #35 POLE (ENSBGRG00000006115) #36 ENSBGRG00000005939 #37 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Laurasiatheria_c ANCESTRAL SPECIES 21 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 ENSGT00390000010780 Chiroptera ANCESTRAL SPECIES 18 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Microchiroptera ANCESTRAL SPECIES 9 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163900 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00390000010780 ENSGT00940000161539 #37 Greater horseshoe bat MODERN SPECIES 17 NCOR2 (ENSRFEG00010019251) SCARB1 (ENSRFEG00010019180) UBC (ENSRFEG00010019157) DHX37 (ENSRFEG00010019110) #8 BRI3BP (ENSRFEG00010019069) #9 AACS (ENSRFEG00010019013) #10 TMEM132B (ENSRFEG00010018973) #11 TMEM132C (ENSRFEG00010018877) #14 SLC15A4 (ENSRFEG00010018811) #15 GLT1D1 (ENSRFEG00010018736) #16 TMEM132D (ENSRFEG00010018660) #17 FZD10 (ENSRFEG00010018630) #18 PIWIL1 (ENSRFEG00010018456) #19 RIMBP2 (ENSRFEG00010018254) #20 STX2 (ENSRFEG00010018166) #21 RAN (ENSRFEG00010018058) ##22 ADGRD1 (ENSRFEG00010017806) #23 SFSWAP (ENSRFEG00010017723) #25 MMP17 (ENSRFEG00010017539) #26 ULK1 (ENSRFEG00010017494) #27 PUS1 (ENSRFEG00010017357) #28 ENSRFEG00010017315 #29 ENSRFEG00010017129 #29 ENSRFEG00010017084 #30 NOC4L (ENSRFEG00010016884) #31 GALNT9 (ENSRFEG00010016787) #32 FBRSL1 (ENSRFEG00010016635) #33 ENSRFEG00010016567 #34 P2RX2 (ENSRFEG00010016540) #35 ENSRFEG00010014253 #36 ENSRFEG00010014185 Equus ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Horse MODERN SPECIES 29 ENSECAG00000047085 BRI3BP (ENSECAG00000015008) #9 AACS (ENSECAG00000015112) #10 TMEM132B (ENSECAG00000006732) #11 ENSECAG00000049905 TMEM132C (ENSECAG00000007519) #14 SLC15A4 (ENSECAG00000009611) #15 GLT1D1 (ENSECAG00000013228) #16 TMEM132D (ENSECAG00000013907) #17 ENSECAG00000033384 FZD10 (ENSECAG00000001633) #18 PIWIL1 (ENSECAG00000016506) #19 RIMBP2 (ENSECAG00000009720) #20 ENSECAG00000031007 STX2 (ENSECAG00000014615) #21 RAN (ENSECAG00000020532) ##22 ADGRD1 (ENSECAG00000022202) #23 SFSWAP (ENSECAG00000007657) #25 MMP17 (ENSECAG00000013201) #26 ULK1 (ENSECAG00000016158) #27 PUS1 (ENSECAG00000006965) #28 EP400 (ENSECAG00000007156) #29 DDX51 (ENSECAG00000018910) #30 NOC4L (ENSECAG00000024217) #31 GALNT9 (ENSECAG00000009252) #32 FBRSL1 (ENSECAG00000015338) #33 LRCOL1 (ENSECAG00000016321) #34 P2RX2 (ENSECAG00000016406) #35 POLE (ENSECAG00000001653) #36 PGAM5 (ENSECAG00000024362) ANKLE2 (ENSECAG00000024483) Carnivora ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Felidae ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Cat MODERN SPECIES 243 SCARB1 (ENSFCAG00000014581) ENSFCAG00000044001 #7 DHX37 (ENSFCAG00000014583) #8 BRI3BP (ENSFCAG00000046486) #9 AACS (ENSFCAG00000014585) #10 TMEM132B (ENSFCAG00000025169) #11 ENSFCAG00000027695 TMEM132C (ENSFCAG00000001691) #14 SLC15A4 (ENSFCAG00000001693) #15 GLT1D1 (ENSFCAG00000028045) #16 TMEM132D (ENSFCAG00000030046) #17 FZD10 (ENSFCAG00000022965) #18 PIWIL1 (ENSFCAG00000014305) #19 RIMBP2 (ENSFCAG00000031758) #20 STX2 (ENSFCAG00000006137) #21 RAN (ENSFCAG00000027375) ##22 ADGRD1 (ENSFCAG00000014334) #23 SFSWAP (ENSFCAG00000010778) #25 MMP17 (ENSFCAG00000022813) #26 ULK1 (ENSFCAG00000010779) #27 PUS1 (ENSFCAG00000010780) #28 ENSFCAG00000050809 #29 ENSFCAG00000035628 #29 DDX51 (ENSFCAG00000010782) #30 NOC4L (ENSFCAG00000010783) #31 GALNT9 (ENSFCAG00000012681) #32 FBRSL1 (ENSFCAG00000052392) #33 ENSFCAG00000050801 P2RX2 (ENSFCAG00000002495) #35 POLE (ENSFCAG00000002498) #36 ENSFCAG00000002500 Caniformia ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Canidae ANCESTRAL SPECIES 23 ENSGT00940000159022 ENSGT00940000153372.B ENSGT00940000163680.z ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Red fox MODERN SPECIES 132 ENSVVUG00000025835 DHX37 (ENSVVUG00000025832) #8 AACS (ENSVVUG00000025830) #10 ENSVVUG00000025829 TMEM132B (ENSVVUG00000025823) #11 ENSVVUG00000025821 ENSVVUG00000025812 TMEM132C (ENSVVUG00000025756) #14 SLC15A4 (ENSVVUG00000025747) #15 GLT1D1 (ENSVVUG00000025741) #16 TMEM132D (ENSVVUG00000025724) #17 FZD10 (ENSVVUG00000025716) #18 PIWIL1 (ENSVVUG00000025695) #19 RIMBP2 (ENSVVUG00000025691) #20 STX2 (ENSVVUG00000025685) #21 RAN (ENSVVUG00000025682) ##22 ADGRD1 (ENSVVUG00000025672) #23 Canis_lupus ANCESTRAL SPECIES ENSGT00940000153786.e.b.b ##22 Dingo MODERN SPECIES 108 ENSCAFG00020012609 ENSCAFG00020012596 DHX37 (ENSCAFG00020012586) #8 BRI3BP (ENSCAFG00020012585) #9 AACS (ENSCAFG00020011711) #10 TMEM132B (ENSCAFG00020011680) #11 ENSCAFG00020011671 TMEM132C (ENSCAFG00020011665) #14 SLC15A4 (ENSCAFG00020011657) #15 GLT1D1 (ENSCAFG00020011654) #16 TMEM132D (ENSCAFG00020011640) #17 FZD10 (ENSCAFG00020011630) #18 PIWIL1 (ENSCAFG00020011618) #19 RIMBP2 (ENSCAFG00020011427) #20 STX2 (ENSCAFG00020011375) #21 RAN (ENSCAFG00020011346) ##22 ADGRD1 (ENSCAFG00020011306) #23 ENSCAFG00020011296 SFSWAP (ENSCAFG00020011254) #25 MMP17 (ENSCAFG00020011243) #26 ULK1 (ENSCAFG00020010753) #27 PUS1 (ENSCAFG00020010737) #28 EP400 (ENSCAFG00020010523) #29 DDX51 (ENSCAFG00020010492) #30 NOC4L (ENSCAFG00020010316) #31 GALNT9 (ENSCAFG00020010295) #32 ENSCAFG00020010289 ENSCAFG00020010283 #33 LRCOL1 (ENSCAFG00020010268) #34 P2RX2 (ENSCAFG00020010262) #35 ENSCAFG00020010247 #36 Atlantogenata ANCESTRAL SPECIES 103 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Xenarthra ANCESTRAL SPECIES 1886 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 Armadillo MODERN SPECIES 1835 STX2 (ENSDNOG00000017486) #21 RAN (ENSDNOG00000009230) ##22 Afrotheria ANCESTRAL SPECIES 136 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Afrotheria_a ANCESTRAL SPECIES 139 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786.e.b.b ##22 ENSGT00940000159783.l #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00440000037606.a ENSGT00940000160709 #33 ENSGT00390000012041 #34 ENSGT01020000230351.A #35 ENSGT00390000010194 #36 ENSGT00940000161539 #37 Elephant MODERN SPECIES 35 ENSLAFG00000011734 #14 SLC15A4 (ENSLAFG00000001645) #15 GLT1D1 (ENSLAFG00000003604) #16 ENSLAFG00000005551 #17 FZD10 (ENSLAFG00000018727) #18 PIWIL1 (ENSLAFG00000013812) #19 RIMBP2 (ENSLAFG00000013819) #20 STX2 (ENSLAFG00000015860) #21 RAN (ENSLAFG00000017673) ##22 ADGRD1 (ENSLAFG00000000719) #23 SFSWAP (ENSLAFG00000014462) #25 MMP17 (ENSLAFG00000016972) #26 ULK1 (ENSLAFG00000003503) #27 PUS1 (ENSLAFG00000028731) #28 EP400 (ENSLAFG00000015029) #29 DDX51 (ENSLAFG00000008274) #30 NOC4L (ENSLAFG00000027295) #31 GALNT9 (ENSLAFG00000006485) #32 ENSLAFG00000014556 ENSLAFG00000029726 #33 ENSLAFG00000031708 #34 ENSLAFG00000031218 #35 POLE (ENSLAFG00000010802) #36 PXMP2 (ENSLAFG00000003751) #37 Eutheria ANCESTRAL SPECIES 128 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Atlantogenata ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Tenrec DUPLICATION Tenrec DUPLICATION Tenrec MODERN SPECIES 18737 ENSETEG00000010467 ##22 Tenrec MODERN SPECIES 11631 ENSETEG00000001748 ##22 Tenrec MODERN SPECIES 10686 ENSETEG00000008439 ##22 Tenrec MODERN SPECIES 18651 ENSETEG00000001581 ##22 Boreoeutheria ANCESTRAL SPECIES 71 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Euarchontoglires ANCESTRAL SPECIES 62 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Euarchontoglires_A ANCESTRAL SPECIES 63 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Tree shrew MODERN SPECIES 1428 ENSTBEG00000001156 ##22 Glires ANCESTRAL SPECIES 64 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Rodentia ANCESTRAL SPECIES 62 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Rodentia_A ANCESTRAL SPECIES 86 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Hystricomorpha ANCESTRAL SPECIES 130 ENSGT00940000153786.f ##22 ENSGT00940000159783.k.a ##23 Naked mole-rat female MODERN SPECIES 15 SCARB1 (ENSHGLG00000012619) ENSHGLG00000036442 #7 DHX37 (ENSHGLG00000014066) #8 ENSHGLG00000033568 #9 ENSHGLG00000042326 #10 ENSHGLG00000039643 #10 ENSHGLG00000046354 SLC15A4 (ENSHGLG00000042909) #15 ENSHGLG00000013515 #16 ENSHGLG00000035470 FZD10 (ENSHGLG00000021307) #18 PIWIL1 (ENSHGLG00000011158) #19 RIMBP2 (ENSHGLG00000016862) #20 ENSHGLG00000017019 ENSHGLG00000039070 #21 ENSHGLG00000036491 ##22 ENSHGLG00000011721 ##23 ENSHGLG00000045897 #25 PUS1 (ENSHGLG00000016086) #28 ENSHGLG00000040557 ENSHGLG00000048765 #29 ENSHGLG00000040714 #29 ENSHGLG00000041416 #30 ENSHGLG00000040511 #32 ENSHGLG00000048094 #32 ENSHGLG00000032742 ENSHGLG00000041641 #33 ENSHGLG00000010386 #35 ENSHGLG00000042063 #36 ENSHGLG00000014969 ENSHGLG00000036084 #37 Sciuridae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Marmotini ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Squirrel MODERN SPECIES 104 ENSSTOG00000023821 ADRB2 (ENSSTOG00000010102) HTR4 (ENSSTOG00000007489) FBXO38 (ENSSTOG00000009088) SPINK7 (ENSSTOG00000033073) SPINK13 (ENSSTOG00000032408) ENSSTOG00000033221 ENSSTOG00000034457 SPINK6 (ENSSTOG00000011797) SPINK14 (ENSSTOG00000031546) SCGB3A2 (ENSSTOG00000013672) SPINK1 (ENSSTOG00000009814) JAKMIP2 (ENSSTOG00000016056) DPYSL3 (ENSSTOG00000006307) STK32A (ENSSTOG00000006290) ENSSTOG00000031912 ##22 PPP2R2B (ENSSTOG00000024142) GPR151 (ENSSTOG00000006259) TCERG1 (ENSSTOG00000024158) POU4F3 (ENSSTOG00000021302) RBM27 (ENSSTOG00000002378) LARS1 (ENSSTOG00000002356) PLAC8L1 (ENSSTOG00000002447) SH3RF2 (ENSSTOG00000002435) GRXCR2 (ENSSTOG00000002429) PRELID2 (ENSSTOG00000002416) KCTD16 (ENSSTOG00000007741) YIPF5 (ENSSTOG00000023465) NR3C1 (ENSSTOG00000016527) ARHGAP26 (ENSSTOG00000016522) FGF1 (ENSSTOG00000027551) Rodentia_B ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Myomorpha ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Lesser Egyptian jerboa MODERN SPECIES 42 Atxn7l3b (ENSJJAG00000002351) ENSJJAG00000009366 ENSJJAG00000022416 ENSJJAG00000023384 ENSJJAG00000013157 ENSJJAG00000023900 Phlda1 (ENSJJAG00000023924) Nap1l1 (ENSJJAG00000023205) ENSJJAG00000024142 Bbs10 (ENSJJAG00000023405) Osbpl8 (ENSJJAG00000024252) ENSJJAG00000011419 ENSJJAG00000014135 ENSJJAG00000005723 E2f7 (ENSJJAG00000007878) ENSJJAG00000010552 ##22 Nav3 (ENSJJAG00000012332) ENSJJAG00000022372 Syt1 (ENSJJAG00000023399) Pawr (ENSJJAG00000018666) Ppp1r12a (ENSJJAG00000023796) Otogl (ENSJJAG00000019493) Ptprq (ENSJJAG00000017741) Myf6 (ENSJJAG00000011250) Myf5 (ENSJJAG00000003407) Lin7a (ENSJJAG00000023503) Acss3 (ENSJJAG00000008308) Ppfia2 (ENSJJAG00000006298) ENSJJAG00000003779 Ccdc59 (ENSJJAG00000015263) Mettl25 (ENSJJAG00000023860) Muroidea ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Murinae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Mus ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Mus_A ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Mus_B ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Mus_C ANCESTRAL SPECIES ENSGT00940000153786.f ##22 spretus MODERN SPECIES 14 Scarb1 (MGP_SPRETEiJ_G0028762) MGP_SPRETEiJ_G0028763 MGP_SPRETEiJ_G0028764 Dhx37 (MGP_SPRETEiJ_G0028765) #8 Bri3bp (MGP_SPRETEiJ_G0028766) #9 Aacs (MGP_SPRETEiJ_G0028767) #10 Tmem132b (MGP_SPRETEiJ_G0028768) #11 Tmem132c (MGP_SPRETEiJ_G0028769) #14 Slc15a4 (MGP_SPRETEiJ_G0028770) #15 Glt1d1 (MGP_SPRETEiJ_G0028771) #16 Tmem132d (MGP_SPRETEiJ_G0028772) #17 Fzd10 (MGP_SPRETEiJ_G0028773) #18 Piwil1 (MGP_SPRETEiJ_G0028774) #19 Rimbp2 (MGP_SPRETEiJ_G0028775) #20 Stx2 (MGP_SPRETEiJ_G0028776) #21 MGP_SPRETEiJ_G0028777 ##22 Adgrd1 (MGP_SPRETEiJ_G0028778) #23 Sfswap (MGP_SPRETEiJ_G0028779) #25 Mmp17 (MGP_SPRETEiJ_G0028780) #26 Zfp11 (MGP_SPRETEiJ_G0028781) Septin14 (MGP_SPRETEiJ_G0028782) Mrps17 (MGP_SPRETEiJ_G0028783) Nipsnap2 (MGP_SPRETEiJ_G0028784) Psph (MGP_SPRETEiJ_G0028785) MGP_SPRETEiJ_G0028786 Phkg1 (MGP_SPRETEiJ_G0028787) Zbed5 (MGP_SPRETEiJ_G0028788) Nupr1l (MGP_SPRETEiJ_G0028789) Vkorc1l1 (MGP_SPRETEiJ_G0028790) Gusb (MGP_SPRETEiJ_G0028791) Asl (MGP_SPRETEiJ_G0028792) Cricetidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Golden Hamster MODERN SPECIES 718 Ncor2 (ENSMAUG00000013606) Scarb1 (ENSMAUG00000008918) Dhx37 (ENSMAUG00000001526) #8 Bri3bp (ENSMAUG00000019042) #9 ENSMAUG00000008123 Aacs (ENSMAUG00000013614) #10 Tmem132b (ENSMAUG00000015750) #11 Tmem132c (ENSMAUG00000013768) #14 Slc15a4 (ENSMAUG00000013546) #15 Glt1d1 (ENSMAUG00000022076) #16 Tmem132d (ENSMAUG00000009144) #17 Fzd10 (ENSMAUG00000007944) #18 Piwil1 (ENSMAUG00000016892) #19 Rimbp2 (ENSMAUG00000019316) #20 Stx2 (ENSMAUG00000021340) #21 ENSMAUG00000015658 ##22 Adgrd1 (ENSMAUG00000007187) #23 Primates ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Mouse lemur MODERN SPECIES 27 IGSF9B (ENSMICG00000004995) JAM3 (ENSMICG00000005013) NCAPD3 (ENSMICG00000005023) VPS26B (ENSMICG00000030270) THYN1 (ENSMICG00000005039) ACAD8 (ENSMICG00000005045) ENSMICG00000026793 GLB1L2 (ENSMICG00000010540) B3GAT1 (ENSMICG00000032749) BARX2 (ENSMICG00000045477) ARHGAP32 (ENSMICG00000016761) KCNJ5 (ENSMICG00000016759) KCNJ1 (ENSMICG00000034245) FLI1 (ENSMICG00000016730) ETS1 (ENSMICG00000011384) ENSMICG00000034492 ##22 KIRREL3 (ENSMICG00000014839) ENSMICG00000043500 DCPS (ENSMICG00000014834) TIRAP (ENSMICG00000015989) FOXRED1 (ENSMICG00000036801) SRPRA (ENSMICG00000015981) FAM118B (ENSMICG00000030128) RPUSD4 (ENSMICG00000015979) CDON (ENSMICG00000004084) ENSMICG00000037764 DDX25 (ENSMICG00000004073) PUS3 (ENSMICG00000032941) ##28 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Marmoset MODERN SPECIES 17 SEC23B (ENSCJAG00000005179) ENSCJAG00000086632 DTD1 (ENSCJAG00000005306) SLC24A3 (ENSCJAG00000005325) RIN2 (ENSCJAG00000005342) ENSCJAG00000005377 CRNKL1 (ENSCJAG00000005393) CFAP61 (ENSCJAG00000005444) INSM1 (ENSCJAG00000040556) RALGAPA2 (ENSCJAG00000005471) KIZ (ENSCJAG00000005568) XRN2 (ENSCJAG00000005611) NKX2-4 (ENSCJAG00000040336) ENSCJAG00000081459 ENSCJAG00000051781 ENSCJAG00000076879 ##22 ENSCJAG00000070559 PAX1 (ENSCJAG00000005773) ENSCJAG00000075555 ENSCJAG00000070048 FOXA2 (ENSCJAG00000005785) THBD (ENSCJAG00000005795) CD93 (ENSCJAG00000005796) NXT1 (ENSCJAG00000044836) GZF1 (ENSCJAG00000000733) NAPB (ENSCJAG00000000712) CSTL1 (ENSCJAG00000041540) CST11 (ENSCJAG00000080392) ENSCJAG00000074097 CST8 (ENSCJAG00000000697) ENSCJAG00000078884 Catarrhini ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Pan ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Bonobo MODERN SPECIES 4 ENSPPAG00000036810 KLF12 (ENSPPAG00000031325) ENSPPAG00000030718 ENSPPAG00000030293 PIBF1 (ENSPPAG00000031918) DIS3 (ENSPPAG00000041783) BORA (ENSPPAG00000034869) KLHL1 (ENSPPAG00000034739) ENSPPAG00000024878 PCDH9 (ENSPPAG00000038567) ENSPPAG00000034439 ENSPPAG00000024792 PCDH20 (ENSPPAG00000012956) ENSPPAG00000035282 TDRD3 (ENSPPAG00000010477) ENSPPAG00000009516 ##22 ENSPPAG00000024941 DIAPH3 (ENSPPAG00000036848) PCDH17 (ENSPPAG00000036507) ENSPPAG00000025298 ENSPPAG00000023659 ENSPPAG00000036165 ENSPPAG00000035921 ENSPPAG00000035928 OLFM4 (ENSPPAG00000036050) PCDH8 (ENSPPAG00000030708) CNMD (ENSPPAG00000006373) SUGT1 (ENSPPAG00000042120) HNRNPA1L2 (ENSPPAG00000039867) CKAP2 (ENSPPAG00000034419) VPS36 (ENSPPAG00000016106) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Rhinopithecus ANCESTRAL SPECIES 220 ENSGT00940000153786.f ##22 ENSGT00950000182902.b.a ENSGT00940000154799.rb.b ENSGT00910000147807 ENSGT00940000160026 ENSGT00390000005855 ENSGT00390000000453 ENSGT00950000182844.b.b.b ENSGT00390000005222 ENSGT00520000059044 ENSGT00940000159749 ENSGT00950000182920.a ENSGT00390000014273.a ENSGT00390000009995 ENSGT00530000063712.a.a.l ENSGT00530000063712.a.a.k Golden snub-nosed monkey MODERN SPECIES 2101 ENSRROG00000044174 ##22 ABHD2 (ENSRROG00000038074) ENSRROG00000030396 RLBP1 (ENSRROG00000030235) FANCI (ENSRROG00000012335) POLG (ENSRROG00000036873) RHCG (ENSRROG00000043144) TICRR (ENSRROG00000042267) ENSRROG00000017194 KIF7 (ENSRROG00000032564) PLIN1 (ENSRROG00000033212) PEX11A (ENSRROG00000039309) WDR93 (ENSRROG00000033222) MESP1 (ENSRROG00000034702) MESP2 (ENSRROG00000032672) ANPEP (ENSRROG00000033722) Black snub-nosed monkey MODERN SPECIES 1004 ENSRBIG00000037389 ##22 ABHD2 (ENSRBIG00000043391) ENSRBIG00000038985 ENSRBIG00000041546 RLBP1 (ENSRBIG00000026443) FANCI (ENSRBIG00000001906) POLG (ENSRBIG00000041136) ENSRBIG00000042152 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Vervet Monkey MODERN SPECIES 2 ENSCSAG00000001984 DHX37 (ENSCSAG00000001977) #8 BRI3BP (ENSCSAG00000001969) #9 AACS (ENSCSAG00000001967) #10 TMEM132B (ENSCSAG00000001963) #11 ENSCSAG00000001962 TMEM132C (ENSCSAG00000001960) #14 SLC15A4 (ENSCSAG00000001957) #15 GLT1D1 (ENSCSAG00000001950) #16 ENSCSAG00000001945 #17 ENSCSAG00000001943 #17 FZD10 (ENSCSAG00000018952) #18 PIWIL1 (ENSCSAG00000001922) #19 RIMBP2 (ENSCSAG00000001911) #20 STX2 (ENSCSAG00000001908) #21 RAN (ENSCSAG00000001906) ##22 ADGRD1 (ENSCSAG00000001899) #23 SFSWAP (ENSCSAG00000001884) #25 MMP17 (ENSCSAG00000001883) #26 ULK1 (ENSCSAG00000001882) #27 PUS1 (ENSCSAG00000001879) #28 EP400 (ENSCSAG00000001875) #29 ENSCSAG00000001871 ##29 DDX51 (ENSCSAG00000001868) #30 NOC4L (ENSCSAG00000001865) #31 GALNT9 (ENSCSAG00000001863) #32 ENSCSAG00000001860 #33 LRCOL1 (ENSCSAG00000001858) #34 P2RX2 (ENSCSAG00000001850) #35 POLE (ENSCSAG00000001836) #36 PXMP2 (ENSCSAG00000001827) #37 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Drill MODERN SPECIES 646 MYC (ENSMLEG00000032954) ENSMLEG00000027474 LRATD2 (ENSMLEG00000027434) ENSMLEG00000038205 ENSMLEG00000040067 TRIB1 (ENSMLEG00000002006) ENSMLEG00000006698 WASHC5 (ENSMLEG00000039974) ADGRB3 (ENSMLEG00000028840) ENSMLEG00000028077 ENSMLEG00000023901 ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Felidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Cat MODERN SPECIES 240 MED12L (ENSFCAG00000010395) P2RY13 (ENSFCAG00000046452) GPR87 (ENSFCAG00000010398) P2RY14 (ENSFCAG00000010397) GPR171 (ENSFCAG00000027964) CLRN1 (ENSFCAG00000010394) MINDY4B (ENSFCAG00000042370) SIAH2 (ENSFCAG00000041639) ERICH6 (ENSFCAG00000023531) SELENOT (ENSFCAG00000032562) EIF2A (ENSFCAG00000011331) SERP1 (ENSFCAG00000041925) TSC22D2 (ENSFCAG00000031850) PFN2 (ENSFCAG00000041725) RNF13 (ENSFCAG00000010281) ENSFCAG00000023659 ##22 ANKUB1 (ENSFCAG00000008571) COMMD2 (ENSFCAG00000042364) WWTR1 (ENSFCAG00000039437) TM4SF4 (ENSFCAG00000040290) TM4SF1 (ENSFCAG00000013771) TM4SF18 (ENSFCAG00000001287) CPHL1 (ENSFCAG00000036951) CP (ENSFCAG00000003223) HPS3 (ENSFCAG00000003222) GYG1 (ENSFCAG00000007859) CPA3 (ENSFCAG00000022469) CPB1 (ENSFCAG00000000222) AGTR1 (ENSFCAG00000000717) ZIC1 (ENSFCAG00000007061) ZIC4 (ENSFCAG00000007059) Caniformia ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1656 ENSAMEG00000029997 ##22 Giant Panda MODERN SPECIES 1692 ENSAMEG00000030454 ##22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 830 ENSAMEG00000024079 ##22 Giant Panda MODERN SPECIES 1571 ENSAMEG00000024154 ##22 Giant Panda MODERN SPECIES 1867 ENSAMEG00000029517 ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Suina ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Chacoan peccary MODERN SPECIES 162 MYEF2 (ENSCWAG00000010804) CTXN2 (ENSCWAG00000010894) SLC12A1 (ENSCWAG00000010955) DUT (ENSCWAG00000011642) FBN1 (ENSCWAG00000012108) CEP152 (ENSCWAG00000013079) SHC4 (ENSCWAG00000013443) ENSCWAG00000013614 SECISBP2L (ENSCWAG00000013654) COPS2 (ENSCWAG00000013767) GALK2 (ENSCWAG00000013932) FAM227B (ENSCWAG00000014030) FGF7 (ENSCWAG00000014249) DTWD1 (ENSCWAG00000014288) ATP8B4 (ENSCWAG00000014354) ENSCWAG00000014561 ##22 ENSCWAG00000014590 SLC27A2 (ENSCWAG00000014655) HDC (ENSCWAG00000014906) GABPB1 (ENSCWAG00000015126) USP8 (ENSCWAG00000015418) ENSCWAG00000015578 USP50 (ENSCWAG00000015632) TRPM7 (ENSCWAG00000015732) SPPL2A (ENSCWAG00000015851) AP4E1 (ENSCWAG00000015944) TNFAIP8L3 (ENSCWAG00000016092) ENSCWAG00000016133 ENSCWAG00000016194 GLDN (ENSCWAG00000016239) DMXL2 (ENSCWAG00000016348) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Pecora ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Yarkand deer MODERN SPECIES 23 VWA8 (ENSCHYG00000018691) ENSCHYG00000018641 ENSCHYG00000018580 ENSCHYG00000018532 NAA16 (ENSCHYG00000017247) MTRF1 (ENSCHYG00000017123) KBTBD7 (ENSCHYG00000017098) KBTBD6 (ENSCHYG00000017049) ENSCHYG00000016947 ELF1 (ENSCHYG00000016851) SUGT1 (ENSCHYG00000016730) CNMD (ENSCHYG00000016613) PCDH8 (ENSCHYG00000016544) ENSCHYG00000016497 OLFM4 (ENSCHYG00000016456) ENSCHYG00000016396 ##22 ENSCHYG00000016341 ENSCHYG00000016296 ENSCHYG00000016273 PCDH17 (ENSCHYG00000016204) ENSCHYG00000016183 ENSCHYG00000016169 ENSCHYG00000016082 ENSCHYG00000015929 DIAPH3 (ENSCHYG00000015421) ENSCHYG00000015322 ENSCHYG00000015275 TDRD3 (ENSCHYG00000015134) ENSCHYG00000015080 ENSCHYG00000014937 Percora_a ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153786.f ##22 Bovinae ANCESTRAL SPECIES 14 ENSGT00940000158164 ENSGT00390000001325 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT00940000153786.f ##22 ENSGT01030000234519.e.a.a.a.a.b ENSGT00510000046986.x.b.b.c ENSGT01030000234519.e.a.a.a.a.a ENSGT00950000183043.a.b.b.a.b ENSGT00950000183043.b.b.g.a ENSGT00950000183043.a.b.a ENSGT00390000002865 ENSGT00940000156090.a ENSGT00390000000748 ENSGT00900000141071 ENSGT00390000007195 ENSGT00910000144278 ENSGT01030000234614.A ENSGT00940000159834 ENSGT00940000154929.A American bison DUPLICATION American bison DUPLICATION American bison MODERN SPECIES 3270 ENSBBBG00000013640 FAT3 (ENSBBBG00000013625) SLC36A4 (ENSBBBG00000002797) DEUP1 (ENSBBBG00000002788) ENSBBBG00000013505 ##22 SMCO4 (ENSBBBG00000013502) CEP295 (ENSBBBG00000013492) TAF1D (ENSBBBG00000013429) ENSBBBG00000013421 MED17 (ENSBBBG00000013353) VSTM5 (ENSBBBG00000002709) ENSBBBG00000013316 HEPHL1 (ENSBBBG00000013308) PANX1 (ENSBBBG00000013290) ENSBBBG00000001620 American bison MODERN SPECIES 3284 TMTC1 (ENSBBBG00000024955) ENSBBBG00000008234 ERGIC2 (ENSBBBG00000006611) FAR2 (ENSBBBG00000006638) CCDC91 (ENSBBBG00000025175) PTHLH (ENSBBBG00000007849) KLHL42 (ENSBBBG00000025229) MANSC4 (ENSBBBG00000006682) MRPS35 (ENSBBBG00000025249) REP15 (ENSBBBG00000025253) PPFIBP1 (ENSBBBG00000001757) C12orf71 (ENSBBBG00000001760) ENSBBBG00000010290 ##22 SMCO2 (ENSBBBG00000010301) BMAL2 (ENSBBBG00000010408) STK38L (ENSBBBG00000010425) MED21 (ENSBBBG00000010435) TM7SF3 (ENSBBBG00000007642) ENSBBBG00000001825 FGFR1OP2 (ENSBBBG00000010494) INTS13 (ENSBBBG00000010504) ITPR2 (ENSBBBG00000010536) SSPN (ENSBBBG00000010548) RASSF8 (ENSBBBG00000010565) ENSBBBG00000010575 ENSBBBG00000010578 KRAS (ENSBBBG00000010586) ENSBBBG00000001854 American bison MODERN SPECIES 3212 ENSBBBG00000003245 GNA14 (ENSBBBG00000014272) GNAQ (ENSBBBG00000001428) CEP78 (ENSBBBG00000006946) PSAT1 (ENSBBBG00000013891) ENSBBBG00000013872 ##22 TLE4 (ENSBBBG00000013848) ENSBBBG00000002908 TLE1 (ENSBBBG00000008115) ENSBBBG00000013680 Bos ANCESTRAL SPECIES 10 ENSGT00940000158164 ENSGT00390000001325 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT00940000153786.f ##22 ENSGT01030000234519.e.a.a.a.a.b ENSGT00510000046986.x.b.b.c ENSGT01030000234519.e.a.a.a.a.a ENSGT00950000183043.a.b.b.a.b ENSGT00940000156705.q.a ENSGT00950000183043.b.b.g.a ENSGT00950000183043.a.b.a ENSGT00390000002865 ENSGT00940000156090.a ENSGT00390000000748 ENSGT00900000141071 ENSGT00390000007195 ENSGT00910000144278 ENSGT01030000234614.A ENSGT00940000159834 Bos_a ANCESTRAL SPECIES 30 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a ENSGT00940000158164 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT00940000153786.f ##22 ENSGT01030000234519.e.a.a.a.a.b ENSGT00510000046986.x.b.b.c ENSGT01030000234519.e.a.a.a.a.a ENSGT00950000183043.a.b.b.a.b ENSGT00940000156705.q.a ENSGT00950000183043.b.b.g.a ENSGT00950000183043.a.b.b.b ENSGT00390000002865 ENSGT00940000156090.a ENSGT00390000000748 ENSGT00900000141071 ENSGT00390000007195 ENSGT00910000144278 ENSGT01030000234614.A ENSGT00940000159834 Wild yak MODERN SPECIES 1317 ENSBMUG00000000552 ##22 Domestic yak MODERN SPECIES 26 CARNMT1 (ENSBGRG00000021200) NMRK1 (ENSBGRG00000021061) OSTF1 (ENSBGRG00000020958) ENSBGRG00000020946 PCSK5 (ENSBGRG00000020040) RFK (ENSBGRG00000019943) GCNT1 (ENSBGRG00000019923) PRUNE2 (ENSBGRG00000019111) FOXB2 (ENSBGRG00000019072) VPS13A (ENSBGRG00000018767) ENSBGRG00000018726 GNA14 (ENSBGRG00000018676) GNAQ (ENSBGRG00000018521) CEP78 (ENSBGRG00000015625) PSAT1 (ENSBGRG00000015370) ENSBGRG00000015298 ##22 TLE4 (ENSBGRG00000014515) ENSBGRG00000014478 TLE1 (ENSBGRG00000014025) ENSBGRG00000013989 ENSBGRG00000013935 ENSBGRG00000013886 ENSBGRG00000013818 PHF24 (ENSBGRG00000013768) DNAJB5 (ENSBGRG00000013654) ENSBGRG00000013635 ENSBGRG00000013622 VCP (ENSBGRG00000013399) FANCG (ENSBGRG00000013233) PIGO (ENSBGRG00000012916) STOML2 (ENSBGRG00000012394) Bos_b ANCESTRAL SPECIES 3 ENSGT00940000158164 ENSGT00390000001325 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT00940000153786.f ##22 ENSGT01030000234519.e.a.a.a.a.b ENSGT00510000046986.x.b.b.c ENSGT01030000234519.e.a.a.a.a.a ENSGT00950000183043.a.b.b.a.b ENSGT00940000156705.q.a ENSGT00950000183043.b.b.g.a ENSGT00950000183043.a.b.a ENSGT00390000002865 ENSGT00940000156090.a ENSGT00390000000748 ENSGT00900000141071 ENSGT00390000007195 ENSGT00910000144278 ENSGT01030000234614.A ENSGT00940000159834 Hybrid Bos Indicus MODERN SPECIES 1 ZNF106 (ENSBIXG00005026701) SNAP23 (ENSBIXG00005026638) LRRC57 (ENSBIXG00005004533) HAUS2 (ENSBIXG00005026508) ENSBIXG00005026441 CDAN1 (ENSBIXG00005025819) TTBK2 (ENSBIXG00005025739) UBR1 (ENSBIXG00005025697) ENSBIXG00005025668 TMEM62 (ENSBIXG00005004373) CCNDBP1 (ENSBIXG00005025617) EPB42 (ENSBIXG00005004355) ENSBIXG00005025440 RPL10L (ENSBIXG00005025410) MDGA2 (ENSBIXG00005025365) ENSBIXG00005025269 ##22 ENSBIXG00005025201 ENSBIXG00005006176 LRR1 (ENSBIXG00005006854) RPL36AL (ENSBIXG00005025097) MGAT2 (ENSBIXG00005025088) DNAAF2 (ENSBIXG00005025065) POLE2 (ENSBIXG00005025043) KLHDC1 (ENSBIXG00005007705) KLHDC2 (ENSBIXG00005024756) NEMF (ENSBIXG00005024651) ARF6 (ENSBIXG00005024374) VCPKMT (ENSBIXG00005024347) SOS2 (ENSBIXG00005004150) L2HGDH (ENSBIXG00005024233) DMAC2L (ENSBIXG00005004131) Cow DUPLICATION Cow MODERN SPECIES 1 ZNF106 (ENSBTAG00000004079) SNAP23 (ENSBTAG00000005661) LRRC57 (ENSBTAG00000031981) HAUS2 (ENSBTAG00000005663) ENSBTAG00000048958 CDAN1 (ENSBTAG00000005751) TTBK2 (ENSBTAG00000006470) UBR1 (ENSBTAG00000021087) TMEM62 (ENSBTAG00000013031) CCNDBP1 (ENSBTAG00000013032) EPB42 (ENSBTAG00000011439) ENSBTAG00000046363 RPL10L (ENSBTAG00000024582) ENSBTAG00000054557 MDGA2 (ENSBTAG00000005697) ENSBTAG00000055000 ##22 ENSBTAG00000034580 ENSBTAG00000055255 RPS29 (ENSBTAG00000052337) LRR1 (ENSBTAG00000004926) RPL36AL (ENSBTAG00000025564) MGAT2 (ENSBTAG00000033891) DNAAF2 (ENSBTAG00000004930) POLE2 (ENSBTAG00000004931) KLHDC1 (ENSBTAG00000031697) KLHDC2 (ENSBTAG00000004933) NEMF (ENSBTAG00000004934) ARF6 (ENSBTAG00000045980) VCPKMT (ENSBTAG00000005547) SOS2 (ENSBTAG00000005550) L2HGDH (ENSBTAG00000015200) Cow MODERN SPECIES 27 OSTF1 (ENSBTAG00000002746) ENSBTAG00000053085 PCSK5 (ENSBTAG00000008101) RFK (ENSBTAG00000019345) GCNT1 (ENSBTAG00000012757) ENSBTAG00000053347 PRUNE2 (ENSBTAG00000012991) ENSBTAG00000048354 FOXB2 (ENSBTAG00000032983) ENSBTAG00000051821 ENSBTAG00000017734 GNA14 (ENSBTAG00000021127) GNAQ (ENSBTAG00000009789) CEP78 (ENSBTAG00000020752) PSAT1 (ENSBTAG00000013960) ENSBTAG00000024233 ##22 TLE4 (ENSBTAG00000003532) ENSBTAG00000006294 TLE1 (ENSBTAG00000000256) ENSBTAG00000005667 ENSBTAG00000050015 ENSBTAG00000049991 FAM205C (ENSBTAG00000017338) PHF24 (ENSBTAG00000012809) DNAJB5 (ENSBTAG00000018318) C8H9orf131 (ENSBTAG00000051343) VCP (ENSBTAG00000015000) FANCG (ENSBTAG00000015005) PIGO (ENSBTAG00000044135) STOML2 (ENSBTAG00000011388) ATOSB (ENSBTAG00000011394) Marsupialia ANCESTRAL SPECIES 16 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183200.A.a.b.b.d ##19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699 #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 Marsupialia_b ANCESTRAL SPECIES 17 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183200.A.a.b.b.d ##19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699.w #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 Diprotodontia ANCESTRAL SPECIES 55 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183200.A.a.b.b.d ##19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699.w #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 Wallaby MODERN SPECIES 11093 ENSMEUG00000004577 #22 Diprotodontia_a ANCESTRAL SPECIES 51 ENSGT00940000153372.B ENSGT00940000162439 #7 ENSGT00550000074985 #8 ENSGT00390000002024 #9 ENSGT00940000156044 #10 ENSGT00940000159630 #11 ENSGT00940000154702.c #14 ENSGT00940000159361 #15 ENSGT00390000016790 #16 ENSGT00940000158942 #17 ENSGT00940000161861 #18 ENSGT00950000183200.A.a.b.b.c #19 ENSGT00950000183200.A.a.b.b.d ##19 ENSGT00950000183203.c #20 ENSGT01030000234627.a.b.a.b #21 ENSGT00940000153786 #22 ENSGT00940000159783 #23 ENSGT00940000153892.B #25 ENSGT00940000158699.w #26 ENSGT00940000156664 #27 ENSGT00950000183160.B #28 ENSGT00940000154764 #29 ENSGT00550000075141 #30 ENSGT00390000016776 #31 ENSGT00940000156599 #32 ENSGT00940000160709 #33 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 #37 Common wonbat MODERN SPECIES 1126 RIMBP2 (ENSVURG00010003931) #20 STX2 (ENSVURG00010003851) #21 RAN (ENSVURG00010003838) #22 ADGRD1 (ENSVURG00010003788) #23 ENSVURG00010003750 SFSWAP (ENSVURG00010003475) #25 ENSVURG00010003436 #26 ULK1 (ENSVURG00010003321) #27 PUS1 (ENSVURG00010003294) #28 ENSVURG00010003255 #29 ENSVURG00010003024 #29 DDX51 (ENSVURG00010002953) #30 NOC4L (ENSVURG00010002929) #31 GALNT9 (ENSVURG00010002793) #32 FBRSL1 (ENSVURG00010002730) #33 CHFR (ENSVURG00010002669) GOLGA3 (ENSVURG00010002615) ANKLE2 (ENSVURG00010002583) koala DUPLICATION koala MODERN SPECIES 348 ENSPCIG00000030800 SLITRK4 (ENSPCIG00000018631) ENSPCIG00000017828 ENSPCIG00000019521 #22 koala MODERN SPECIES 102 SCARB1 (ENSPCIG00000033235) ENSPCIG00000005808 #7 DHX37 (ENSPCIG00000019185) #8 AACS (ENSPCIG00000021722) #10 TMEM132B (ENSPCIG00000021721) #11 TMEM132C (ENSPCIG00000030934) #14 SLC15A4 (ENSPCIG00000003264) #15 GLT1D1 (ENSPCIG00000003245) #16 ENSPCIG00000023863 #17 ENSPCIG00000023865 FZD10 (ENSPCIG00000021064) #18 PIWIL1 (ENSPCIG00000021062) #19 ENSPCIG00000021061 ##19 RIMBP2 (ENSPCIG00000021060) #20 STX2 (ENSPCIG00000021650) #21 ENSPCIG00000021645 #22 ADGRD1 (ENSPCIG00000021641) #23 ENSPCIG00000017330 ENSPCIG00000032496 ENSPCIG00000006066 SFSWAP (ENSPCIG00000006062) #25 MMP17 (ENSPCIG00000006061) #26 ULK1 (ENSPCIG00000006060) #27 PUS1 (ENSPCIG00000022609) #28 EP400 (ENSPCIG00000005158) #29 DDX51 (ENSPCIG00000005052) #30 NOC4L (ENSPCIG00000004756) #31 GALNT9 (ENSPCIG00000016683) #32 FBRSL1 (ENSPCIG00000026990) #33 CHFR (ENSPCIG00000026999) GOLGA3 (ENSPCIG00000027001) Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES ENSSHAG00000030169 SEMA5A (ENSSHAG00000025721) ENSSHAG00000004959 MTRR (ENSSHAG00000006711) FASTKD3 (ENSSHAG00000006423) CFAP90 (ENSSHAG00000027105) ADCY2 (ENSSHAG00000002581) TENT4A (ENSSHAG00000012100) SRD5A1 (ENSSHAG00000025750) NSUN2 (ENSSHAG00000011056) ENSSHAG00000030712 MED10 (ENSSHAG00000020951) ENSSHAG00000018751 ENSSHAG00000027523 ADAMTS16 (ENSSHAG00000018320) ENSSHAG00000018018 #22 IRX1 (ENSSHAG00000013463) IRX2 (ENSSHAG00000001675) IRX4 (ENSSHAG00000023225) NDUFS6 (ENSSHAG00000028770) MRPL36 (ENSSHAG00000024894) LPCAT1 (ENSSHAG00000016583) SLC6A3 (ENSSHAG00000016299) CLPTM1L (ENSSHAG00000016099) ENSSHAG00000015951 SLC6A18 (ENSSHAG00000015730) SLC6A19 (ENSSHAG00000015547) SLC12A7 (ENSSHAG00000014012) NKD2 (ENSSHAG00000027971) TRIP13 (ENSSHAG00000009652) BRD9 (ENSSHAG00000009296) Tasmanian devil MODERN SPECIES BRI3BP (ENSSHAG00000029386) #9 AACS (ENSSHAG00000005605) #10 ENSSHAG00000003504 #11 ENSSHAG00000029114 TMEM132C (ENSSHAG00000015138) #14 SLC15A4 (ENSSHAG00000014737) #15 GLT1D1 (ENSSHAG00000014114) #16 ENSSHAG00000027502 #17 ENSSHAG00000030355 ENSSHAG00000000025 ENSSHAG00000016822 #18 ENSSHAG00000016260 #19 ENSSHAG00000016064 ##19 RIMBP2 (ENSSHAG00000015685) #20 STX2 (ENSSHAG00000027891) #21 ENSSHAG00000026468 #22 ADGRD1 (ENSSHAG00000011700) #23 SFSWAP (ENSSHAG00000014232) #25 ENSSHAG00000013813 #26 ENSSHAG00000028855 #26 ULK1 (ENSSHAG00000013399) #27 PUS1 (ENSSHAG00000013193) #28 EP400 (ENSSHAG00000012476) #29 ENSSHAG00000012001 #29 DDX51 (ENSSHAG00000011696) #30 NOC4L (ENSSHAG00000011598) #31 GALNT9 (ENSSHAG00000009433) #32 ENSSHAG00000031198 #33 ENSSHAG00000001239 ANKLE2 (ENSSHAG00000010335) PGAM5 (ENSSHAG00000010277) Opossum DUPLICATION Opossum MODERN SPECIES 2 ENSMODG00000048892 #9 AACS (ENSMODG00000015672) #10 ENSMODG00000015657 #11 ENSMODG00000050318 ENSMODG00000015653 TMEM132C (ENSMODG00000015648) #14 SLC15A4 (ENSMODG00000015645) #15 ENSMODG00000037887 GLT1D1 (ENSMODG00000015634) #16 ENSMODG00000045547 #17 FZD10 (ENSMODG00000015625) #18 PIWIL1 (ENSMODG00000015619) #19 ENSMODG00000045138 ##19 RIMBP2 (ENSMODG00000015603) #20 STX2 (ENSMODG00000015598) #21 ENSMODG00000036415 #22 ENSMODG00000015591 #23 ENSMODG00000028918 ENSMODG00000039509 #23 SFSWAP (ENSMODG00000015581) #25 MMP17 (ENSMODG00000015576) #26 ULK1 (ENSMODG00000015566) #27 PUS1 (ENSMODG00000015551) #28 EP400 (ENSMODG00000015487) #29 ENSMODG00000047289 #29 DDX51 (ENSMODG00000015355) #30 NOC4L (ENSMODG00000015342) #31 ENSMODG00000046361 GALNT9 (ENSMODG00000015333) #32 FBRSL1 (ENSMODG00000015281) #33 CHFR (ENSMODG00000015272) Opossum MODERN SPECIES 2 ENSMODG00000009939 RIOK1 (ENSMODG00000009964) ENSMODG00000043475 DSP (ENSMODG00000009982) SNRNP48 (ENSMODG00000009996) ENSMODG00000046703 BMP6 (ENSMODG00000010012) TXNDC5 (ENSMODG00000010022) BLOC1S5 (ENSMODG00000046178) EEF1E1 (ENSMODG00000048450) SLC35B3 (ENSMODG00000010044) ENSMODG00000022856 ENSMODG00000045776 ENSMODG00000039144 ENSMODG00000010252 ENSMODG00000006895 #22 TFAP2A (ENSMODG00000010299) GCNT2 (ENSMODG00000027437) ENSMODG00000028324 PAK1IP1 (ENSMODG00000010339) TMEM14C (ENSMODG00000025623) MAK (ENSMODG00000010363) GCM2 (ENSMODG00000010371) ENSMODG00000025643 ELOVL2 (ENSMODG00000049964) SMIM13 (ENSMODG00000041245) NEDD9 (ENSMODG00000010526) TMEM170B (ENSMODG00000024618) ENSMODG00000010539 HIVEP1 (ENSMODG00000010547) EDN1 (ENSMODG00000010567) Platypus MODERN SPECIES 11 NCOR2 (ENSOANG00000001321) SCARB1 (ENSOANG00000001322) ENSOANG00000015956 DHX37 (ENSOANG00000001323) #8 BRI3BP (ENSOANG00000050918) #9 AACS (ENSOANG00000014881) #10 TMEM132B (ENSOANG00000014878) #11 TMEM132C (ENSOANG00000009947) #14 SLC15A4 (ENSOANG00000009948) #15 GLT1D1 (ENSOANG00000046392) #16 TMEM132D (ENSOANG00000009950) #17 FZD10 (ENSOANG00000000935) #18 PIWIL1 (ENSOANG00000011950) #19 RIMBP2 (ENSOANG00000000603) #20 STX2 (ENSOANG00000040292) #21 RAN (ENSOANG00000006447) #22 ADGRD1 (ENSOANG00000046948) #23 SFSWAP (ENSOANG00000013861) #25 MMP17 (ENSOANG00000036389) #26 ULK1 (ENSOANG00000013859) #27 GOLGA3 (ENSOANG00000013857) CHFR (ENSOANG00000013856) ENSOANG00000013855 #33 GALNT9 (ENSOANG00000009421) #32 NOC4L (ENSOANG00000007306) #31 ENSOANG00000006595 #29 EP400 (ENSOANG00000006596) #29 PUS1 (ENSOANG00000036346) #28 ENSOANG00000040597 PGAM5 (ENSOANG00000045157) ENSOANG00000049259