Sarcopterygii ANCESTRAL SPECIES 49 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.b.b.b.b.a ##12 ENSGT01030000234542.b.a.a.a.b ##14 ENSGT01030000234542.b.a.a.b.a.b ##14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00730000111835 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000154969.a Tetrapoda ANCESTRAL SPECIES 11 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.b.b.b.b.a ##12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000154969.a Amniota ANCESTRAL SPECIES 15 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT01030000234542.b.a.a.b.a.b ##14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00950000185579 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Mammalia ANCESTRAL SPECIES 28 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00950000185579 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Theria ANCESTRAL SPECIES 22 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00950000185579 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00940000159331.b #26 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Boreoeutheria DUPLICATION Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Primates ANCESTRAL SPECIES 2 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Haplorrhini ANCESTRAL SPECIES 17 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Simiiformes ANCESTRAL SPECIES 2 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Catarrhini ANCESTRAL SPECIES 20 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 Rhinopithecus ANCESTRAL SPECIES 221 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00440000034918.r.i ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000155058.e.a ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000153446.a.b ENSGT00940000159638 Golden snub-nosed monkey MODERN SPECIES 1781 APH1B (ENSRROG00000011379) #10 RAB8B (ENSRROG00000034232) #11 RPS27L (ENSRROG00000033177) #12 LACTB (ENSRROG00000005892) #13 TPM1 (ENSRROG00000028719) #14 ENSRROG00000029301 #15 TLN2 (ENSRROG00000035156) #16 ENSRROG00000038361 #17 C2CD4B (ENSRROG00000040328) #18 VPS13C (ENSRROG00000031121) #19 RORA (ENSRROG00000044355) #20 ICE2 (ENSRROG00000043475) #21 ANXA2 (ENSRROG00000044822) #22 FOXB1 (ENSRROG00000002054) #23 BNIP2 (ENSRROG00000039446) #24 GTF2A2 (ENSRROG00000042120) #25 GCNT3 (ENSRROG00000010325) #26 ENSRROG00000039634 #27 FAM81A (ENSRROG00000042062) #28 ENSRROG00000041714 #29 MYO1E (ENSRROG00000033829) #30 ENSRROG00000031519 #31 ENSRROG00000031107 #32 RNF111 (ENSRROG00000042594) #33 SLTM (ENSRROG00000045301) #34 ENSRROG00000017628 #35 MINDY2 (ENSRROG00000029314) #36 ADAM10 (ENSRROG00000040154) #37 Black snub-nosed monkey MODERN SPECIES 191 ZNF766 (ENSRBIG00000043680) ZNF480 (ENSRBIG00000025433) ZNF610 (ENSRBIG00000028742) ZNF880 (ENSRBIG00000036093) ZNF528 (ENSRBIG00000043366) ENSRBIG00000031520 ENSRBIG00000032614 ENSRBIG00000035402 ZNF701 (ENSRBIG00000038188) ENSRBIG00000028970 ENSRBIG00000037488 ENSRBIG00000037978 RORA (ENSRBIG00000022050) #20 ICE2 (ENSRBIG00000030556) #21 ENSRBIG00000029223 ANXA2 (ENSRBIG00000041394) #22 NPTX2 (ENSRBIG00000037271) TMEM130 (ENSRBIG00000038360) TRRAP (ENSRBIG00000043840) SMURF1 (ENSRBIG00000035136) KPNA7 (ENSRBIG00000032648) ENSRBIG00000026342 ARPC1A (ENSRBIG00000034019) ARPC1B (ENSRBIG00000022904) Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00390000018706.m.a ENSGT00940000157461 #30 ENSGT00940000163242.e ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00440000034918.r.i ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00390000018706.m.a ENSGT00940000157461 #30 ENSGT00940000163242.e ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 36 ENSPANG00000049830 #20 ENSPANG00000038904 #21 ENSPANG00000049446 ENSPANG00000042012 #22 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 4 UGCG (ENSPANG00000025759) SHOC1 (ENSPANG00000025760) GNG10 (ENSPANG00000025761) DNAJC25 (ENSPANG00000025757) ENSPANG00000044903 PTGR1 (ENSPANG00000025742) ENSPANG00000047072 ENSPANG00000025744 OR2K2 (ENSPANG00000001755) ENSPANG00000037739 MUSK (ENSPANG00000025746) SVEP1 (ENSPANG00000025748) TXNDC8 (ENSPANG00000025740) ENSPANG00000031185 C9orf152 (ENSPANG00000025739) ENSPANG00000035251 #22 PALM2AKAP2 (ENSPANG00000025738) ENSPANG00000048512 ENSPANG00000048220 PTPN3 (ENSPANG00000025736) EPB41L4B (ENSPANG00000025737) FRRS1L (ENSPANG00000025735) TMEM245 (ENSPANG00000025734) CTNNAL1 (ENSPANG00000025732) ABITRAM (ENSPANG00000025733) ELP1 (ENSPANG00000025731) ACTL7A (ENSPANG00000014060) ACTL7B (ENSPANG00000019789) KLF4 (ENSPANG00000040002) RAD23B (ENSPANG00000025719) ENSPANG00000044746 Olive baboon MODERN SPECIES 17 USP3 (ENSPANG00000016961) CA12 (ENSPANG00000016960) APH1B (ENSPANG00000016959) #10 RAB8B (ENSPANG00000016985) #11 RPS27L (ENSPANG00000034038) #12 LACTB (ENSPANG00000016984) #13 ENSPANG00000016983 #14 ENSPANG00000048538 ENSPANG00000001886 ENSPANG00000042891 ENSPANG00000031248 ENSPANG00000017172 #20 ENSPANG00000040994 ENSPANG00000017201 #21 ENSPANG00000043268 ENSPANG00000017200 #22 ENSPANG00000050431 FOXB1 (ENSPANG00000000869) #23 ENSPANG00000017199 #24 GTF2A2 (ENSPANG00000032423) #25 ENSPANG00000047784 #26 ENSPANG00000017197 #28 ENSPANG00000032768 #29 ENSPANG00000039068 ENSPANG00000017217 #36 ENSPANG00000017193 #34 ENSPANG00000017216 #37 ENSPANG00000017219 ENSPANG00000017222 ENSPANG00000037769 ENSPANG00000017221 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00390000018706.m.a ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 Sooty mangabey MODERN SPECIES 336 DAPK2 (ENSCATG00000043801) HERC1 (ENSCATG00000031246) FBXL22 (ENSCATG00000033595) USP3 (ENSCATG00000026128) CA12 (ENSCATG00000029646) APH1B (ENSCATG00000031142) #10 RAB8B (ENSCATG00000034026) #11 RPS27L (ENSCATG00000019220) #12 LACTB (ENSCATG00000032182) #13 TPM1 (ENSCATG00000043567) #14 TLN2 (ENSCATG00000039955) #16 ENSCATG00000020724 #17 VPS13C (ENSCATG00000041944) #19 RORA (ENSCATG00000041834) #20 ICE2 (ENSCATG00000043106) #21 ANXA2 (ENSCATG00000043236) #22 ENSCATG00000034012 FOXB1 (ENSCATG00000021214) #23 ENSCATG00000033079 BNIP2 (ENSCATG00000039445) #24 ENSCATG00000040454 #25 GCNT3 (ENSCATG00000040930) #26 FAM81A (ENSCATG00000031214) #28 ENSCATG00000043413 #29 ENSCATG00000030798 MYO1E (ENSCATG00000034350) #30 CCNB2 (ENSCATG00000037096) #32 RNF111 (ENSCATG00000040370) #33 SLTM (ENSCATG00000030254) #34 MINDY2 (ENSCATG00000043333) #36 ADAM10 (ENSCATG00000041125) #37 Drill MODERN SPECIES 1342 RORA (ENSMLEG00000028316) #20 ICE2 (ENSMLEG00000034897) #21 ANXA2 (ENSMLEG00000032844) #22 FOXB1 (ENSMLEG00000036874) #23 Macaca ANCESTRAL SPECIES 1 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000154384.h.b #29 ENSGT00390000018706.m.a ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 Pig-tailed macaque MODERN SPECIES 77 HERC1 (ENSMNEG00000042046) FBXL22 (ENSMNEG00000003587) USP3 (ENSMNEG00000040681) CA12 (ENSMNEG00000035236) APH1B (ENSMNEG00000034795) #10 RAB8B (ENSMNEG00000033725) #11 RPS27L (ENSMNEG00000033448) #12 LACTB (ENSMNEG00000032367) #13 TPM1 (ENSMNEG00000031245) #14 ENSMNEG00000034201 #15 TLN2 (ENSMNEG00000028802) #16 ENSMNEG00000013327 #17 VPS13C (ENSMNEG00000030758) #19 RORA (ENSMNEG00000020975) #20 ICE2 (ENSMNEG00000034514) #21 ANXA2 (ENSMNEG00000043015) #22 FOXB1 (ENSMNEG00000015910) #23 BNIP2 (ENSMNEG00000033516) #24 GTF2A2 (ENSMNEG00000030439) #25 GCNT3 (ENSMNEG00000013859) #26 FAM81A (ENSMNEG00000029984) #28 ENSMNEG00000038663 #29 ENSMNEG00000041217 MYO1E (ENSMNEG00000002815) #30 CCNB2 (ENSMNEG00000038718) #32 RNF111 (ENSMNEG00000004287) #33 SLTM (ENSMNEG00000025105) #34 ENSMNEG00000021451 #35 MINDY2 (ENSMNEG00000042969) #36 ADAM10 (ENSMNEG00000040922) #37 LIPC (ENSMNEG00000034628) Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00390000008820.e.b.a.a.a ENSGT00950000183083.a.d.a #19 ENSGT00940000164709.a.b.b.a.a.a.a.a.b.a ENSGT00940000164709.a.b.b.a.b.b.b.b.a.a.d.b ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000154384.h.b #29 ENSGT00390000004985.b #28 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00910000147762 #35 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 Crab-eating macaque MODERN SPECIES 17 LACTB (ENSMFAG00000001322) #13 ENSMFAG00000030943 #14 TLN2 (ENSMFAG00000003975) #16 ENSMFAG00000052652 #17 ENSMFAG00000057223 ENSMFAG00000034175 #18 ENSMFAG00000053675 #18 ENSMFAG00000030850 VPS13C (ENSMFAG00000001003) #19 ENSMFAG00000055861 ENSMFAG00000054832 ENSMFAG00000058783 ENSMFAG00000055173 RORA (ENSMFAG00000043163) #20 ICE2 (ENSMFAG00000036919) #21 ANXA2 (ENSMFAG00000030479) #22 FOXB1 (ENSMFAG00000013645) #23 ENSMFAG00000063104 BNIP2 (ENSMFAG00000033391) #24 ENSMFAG00000034656 #25 GCNT3 (ENSMFAG00000038485) #26 ENSMFAG00000045407 #29 FAM81A (ENSMFAG00000044204) #28 ENSMFAG00000048877 LDHAL6B (ENSMFAG00000049071) MYO1E (ENSMFAG00000032366) #30 CCNB2 (ENSMFAG00000042779) #32 RNF111 (ENSMFAG00000031221) #33 SLTM (ENSMFAG00000033354) #34 MINDY2 (ENSMFAG00000033162) #36 ADAM10 (ENSMFAG00000003773) #37 Rhesus MODERN SPECIES 17 ENSMMUG00000056092 TLN2 (ENSMMUG00000011503) #16 C2CD4B (ENSMMUG00000058198) #18 C2CD4A (ENSMMUG00000060717) ##18 ENSMMUG00000013725 VPS13C (ENSMMUG00000001362) #19 ENSMMUG00000054608 ENSMMUG00000062356 ENSMMUG00000063453 ENSMMUG00000058418 ENSMMUG00000058446 ENSMMUG00000054271 ENSMMUG00000050503 RORA (ENSMMUG00000018192) #20 ICE2 (ENSMMUG00000021320) #21 ANXA2 (ENSMMUG00000012000) #22 FOXB1 (ENSMMUG00000001379) #23 BNIP2 (ENSMMUG00000020348) #24 GTF2A2 (ENSMMUG00000039935) #25 GCNT3 (ENSMMUG00000018426) #26 FAM81A (ENSMMUG00000016390) #28 LDHAL6B (ENSMMUG00000060242) MYO1E (ENSMMUG00000012933) #30 CCNB2 (ENSMMUG00000029628) #32 ENSMMUG00000063524 RNF111 (ENSMMUG00000013089) #33 SLTM (ENSMMUG00000022200) #34 ENSMMUG00000061679 #35 MINDY2 (ENSMMUG00000018109) #36 ADAM10 (ENSMMUG00000017507) #37 LIPC (ENSMMUG00000009566) Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 5 TGOLN2 (ENSCSAG00000016094) TCF7L1 (ENSCSAG00000016081) ENSCSAG00000019435 ENSCSAG00000016057 TRABD2A (ENSCSAG00000016047) DNAH6 (ENSCSAG00000015982) SUCLG1 (ENSCSAG00000015890) CTNNA2 (ENSCSAG00000015885) LRRTM1 (ENSCSAG00000019436) ENSCSAG00000015880 REG3A (ENSCSAG00000015875) REG1A (ENSCSAG00000015871) ENSCSAG00000015868 REG1B (ENSCSAG00000015863) LRRTM4 (ENSCSAG00000015859) ENSCSAG00000019437 #22 GCFC2 (ENSCSAG00000015854) ENSCSAG00000015841 EVA1A (ENSCSAG00000015831) TACR1 (ENSCSAG00000015821) POLE4 (ENSCSAG00000015812) HK2 (ENSCSAG00000015807) SEMA4F (ENSCSAG00000015795) M1AP (ENSCSAG00000015778) DOK1 (ENSCSAG00000015748) LOXL3 (ENSCSAG00000015742) HTRA2 (ENSCSAG00000015736) AUP1 (ENSCSAG00000015721) DQX1 (ENSCSAG00000015682) TLX2 (ENSCSAG00000015661) PCGF1 (ENSCSAG00000015654) Vervet Monkey MODERN SPECIES 18 FBXL22 (ENSCSAG00000012364) USP3 (ENSCSAG00000012354) CA12 (ENSCSAG00000012342) APH1B (ENSCSAG00000012332) #10 RAB8B (ENSCSAG00000012326) #11 LACTB (ENSCSAG00000012318) #13 TPM1 (ENSCSAG00000012303) #14 TLN2 (ENSCSAG00000012262) #16 ENSCSAG00000012237 ENSCSAG00000012210 C2CD4B (ENSCSAG00000019738) #18 C2CD4A (ENSCSAG00000019739) ##18 VPS13C (ENSCSAG00000012132) #19 RORA (ENSCSAG00000012081) #20 ICE2 (ENSCSAG00000012073) #21 ANXA2 (ENSCSAG00000012062) #22 FOXB1 (ENSCSAG00000019740) #23 BNIP2 (ENSCSAG00000012052) #24 GCNT3 (ENSCSAG00000019741) #26 FAM81A (ENSCSAG00000012043) #28 MYO1E (ENSCSAG00000012036) #30 LDHAL6B (ENSCSAG00000019742) CCNB2 (ENSCSAG00000012024) #32 RNF111 (ENSCSAG00000012015) #33 SLTM (ENSCSAG00000012004) #34 MINDY2 (ENSCSAG00000011994) #36 ADAM10 (ENSCSAG00000011980) #37 LIPC (ENSCSAG00000011971) AQP9 (ENSCSAG00000011963) ALDH1A2 (ENSCSAG00000011956) ENSCSAG00000011949 Hominoidea ANCESTRAL SPECIES 20 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00910000148040 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 Gibbon MODERN SPECIES 21 ENSNLEG00000029982 USP3 (ENSNLEG00000012274) CA12 (ENSNLEG00000012252) APH1B (ENSNLEG00000012240) #10 RAB8B (ENSNLEG00000012227) #11 RPS27L (ENSNLEG00000027571) #12 LACTB (ENSNLEG00000012215) #13 ENSNLEG00000012145 #14 ENSNLEG00000006575 #15 ENSNLEG00000012111 #16 ENSNLEG00000031415 #18 C2CD4A (ENSNLEG00000012098) ##18 VPS13C (ENSNLEG00000011894) #19 RORA (ENSNLEG00000011865) #20 ICE2 (ENSNLEG00000011832) #21 ANXA2 (ENSNLEG00000011678) #22 FOXB1 (ENSNLEG00000011675) #23 ENSNLEG00000028766 ENSNLEG00000027282 ENSNLEG00000011659 #24 GTF2A2 (ENSNLEG00000030007) #25 GCNT3 (ENSNLEG00000011644) #26 FAM81A (ENSNLEG00000011636) #28 LDHAL6B (ENSNLEG00000018898) MYO1E (ENSNLEG00000011582) #30 CCNB2 (ENSNLEG00000011543) #32 RNF111 (ENSNLEG00000011505) #33 SLTM (ENSNLEG00000011440) #34 MINDY2 (ENSNLEG00000011420) #36 ADAM10 (ENSNLEG00000011378) #37 LIPC (ENSNLEG00000011332) Hominidae ANCESTRAL SPECIES 22 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000154355.e.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00440000034918.r.i ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000163242.e ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a.e #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000154355.e.b Gorilla DUPLICATION Gorilla MODERN SPECIES 6 CA12 (ENSGGOG00000002094) APH1B (ENSGGOG00000043020) #10 RAB8B (ENSGGOG00000008799) #11 RPS27L (ENSGGOG00000025910) #12 LACTB (ENSGGOG00000014658) #13 TPM1 (ENSGGOG00000009130) #14 TLN2 (ENSGGOG00000015139) #16 ENSGGOG00000043465 #17 C2CD4B (ENSGGOG00000025149) #18 ENSGGOG00000024083 ##18 VPS13C (ENSGGOG00000016853) #19 RORA (ENSGGOG00000000541) #20 ENSGGOG00000040058 ENSGGOG00000040146 ICE2 (ENSGGOG00000022206) #21 ENSGGOG00000009738 #22 FOXB1 (ENSGGOG00000024062) #23 ENSGGOG00000040675 ENSGGOG00000042348 ENSGGOG00000005147 #24 GTF2A2 (ENSGGOG00000024127) #25 GCNT3 (ENSGGOG00000015222) #26 FAM81A (ENSGGOG00000015899) #28 ENSGGOG00000027194 ENSGGOG00000042225 ENSGGOG00000036165 LDHAL6B (ENSGGOG00000022172) MYO1E (ENSGGOG00000007653) #30 CCNB2 (ENSGGOG00000007644) #32 RNF111 (ENSGGOG00000017000) #33 SLTM (ENSGGOG00000015866) #34 Gorilla MODERN SPECIES 22 NDUFB6 (ENSGGOG00000010253) TMEM215 (ENSGGOG00000043117) ENSGGOG00000027578 APTX (ENSGGOG00000014232) ENSGGOG00000041353 ENSGGOG00000007030 SMU1 (ENSGGOG00000014802) B4GALT1 (ENSGGOG00000009135) ENSGGOG00000016528 BAG1 (ENSGGOG00000016534) CHMP5 (ENSGGOG00000016542) NFX1 (ENSGGOG00000006751) ENSGGOG00000043220 AQP3 (ENSGGOG00000003993) NOL6 (ENSGGOG00000003997) ENSGGOG00000037469 #22 ENSGGOG00000039771 ENSGGOG00000000350 ENSGGOG00000024027 ENSGGOG00000013297 UBE2R2 (ENSGGOG00000013304) UBAP2 (ENSGGOG00000013320) DCAF12 (ENSGGOG00000008404) UBAP1 (ENSGGOG00000000674) ENSGGOG00000027997 KIF24 (ENSGGOG00000000675) NUDT2 (ENSGGOG00000003907) MYORG (ENSGGOG00000007706) C9orf24 (ENSGGOG00000004937) FAM219A (ENSGGOG00000011945) DNAI1 (ENSGGOG00000004522) Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00440000034918.r.i ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000163242.e ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a.e #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000154355.e.b Pan ANCESTRAL SPECIES 20 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00940000164336 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000153341.b.p.a.b.b.b.b.g.a #15 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000163765.e.b #18 ENSGT00940000163765.e.a ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00910000148040 ENSGT00680000100037.g.a.b.a.a ENSGT00940000167633 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00390000018706.m.b.b.l.a ENSGT00940000163242.e ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a.e #36 Bonobo MODERN SPECIES 6 ENSPPAG00000043136 USP3 (ENSPPAG00000040233) CA12 (ENSPPAG00000043661) APH1B (ENSPPAG00000013129) #10 RAB8B (ENSPPAG00000037656) #11 ENSPPAG00000027359 LACTB (ENSPPAG00000032543) #13 TPM1 (ENSPPAG00000004536) #14 ENSPPAG00000032491 #15 TLN2 (ENSPPAG00000035497) #16 ENSPPAG00000041336 #17 ENSPPAG00000002371 VPS13C (ENSPPAG00000029152) #19 RORA (ENSPPAG00000038168) #20 ICE2 (ENSPPAG00000004647) #21 ANXA2 (ENSPPAG00000043943) #22 FOXB1 (ENSPPAG00000014279) #23 ENSPPAG00000004248 ENSPPAG00000036328 ENSPPAG00000040483 #24 GTF2A2 (ENSPPAG00000037230) #25 GCNT3 (ENSPPAG00000006538) #26 FAM81A (ENSPPAG00000034650) #28 ENSPPAG00000042872 LDHAL6B (ENSPPAG00000017634) MYO1E (ENSPPAG00000042211) #30 CCNB2 (ENSPPAG00000037736) #32 RNF111 (ENSPPAG00000023370) #33 SLTM (ENSPPAG00000029308) #34 MINDY2 (ENSPPAG00000040407) #36 ENSPPAG00000006779 Chimpanzee MODERN SPECIES 6 CA12 (ENSPTRG00000051680) APH1B (ENSPTRG00000007146) #10 RAB8B (ENSPTRG00000043064) #11 ENSPTRG00000007144 LACTB (ENSPTRG00000007143) #13 TPM1 (ENSPTRG00000007141) #14 ENSPTRG00000043477 #15 TLN2 (ENSPTRG00000007140) #16 ENSPTRG00000050886 #17 C2CD4B (ENSPTRG00000049027) #18 C2CD4A (ENSPTRG00000030264) ##18 VPS13C (ENSPTRG00000007135) #19 RORA (ENSPTRG00000052707) #20 ICE2 (ENSPTRG00000007133) #21 ENSPTRG00000042801 ANXA2 (ENSPTRG00000007132) #22 FOXB1 (ENSPTRG00000007131) #23 ENSPTRG00000048257 ENSPTRG00000047092 ENSPTRG00000049013 BNIP2 (ENSPTRG00000007130) #24 GTF2A2 (ENSPTRG00000007129) #25 GCNT3 (ENSPTRG00000007128) #26 FAM81A (ENSPTRG00000007127) #28 ENSPTRG00000045531 LDHAL6B (ENSPTRG00000007125) MYO1E (ENSPTRG00000007124) #30 CCNB2 (ENSPTRG00000007123) #32 RNF111 (ENSPTRG00000007122) #33 SLTM (ENSPTRG00000007121) #34 MINDY2 (ENSPTRG00000044903) #36 Human MODERN SPECIES 6 HERC1 (ENSG00000103657) FBXL22 (ENSG00000197361) USP3 (ENSG00000140455) CA12 (ENSG00000074410) APH1B (ENSG00000138613) #10 RAB8B (ENSG00000166128) #11 RPS27L (ENSG00000185088) #12 LACTB (ENSG00000103642) #13 TPM1 (ENSG00000140416) #14 TLN2 (ENSG00000171914) #16 C2CD4B (ENSG00000205502) #18 C2CD4A (ENSG00000198535) ##18 VPS13C (ENSG00000129003) #19 RORA (ENSG00000069667) #20 ICE2 (ENSG00000128915) #21 ANXA2 (ENSG00000182718) #22 FOXB1 (ENSG00000171956) #23 BNIP2 (ENSG00000140299) #24 GTF2A2 (ENSG00000140307) #25 GCNT3 (ENSG00000140297) #26 FAM81A (ENSG00000157470) #28 LDHAL6B (ENSG00000171989) MYO1E (ENSG00000157483) #30 CCNB2 (ENSG00000157456) #32 SLTM (ENSG00000137776) #34 RNF111 (ENSG00000157450) #33 MINDY2 (ENSG00000128923) #36 ADAM10 (ENSG00000137845) #37 LIPC (ENSG00000166035) AQP9 (ENSG00000103569) ALDH1A2 (ENSG00000128918) Orangutan MODERN SPECIES 6 ENSPPYG00000036524 USP3 (ENSPPYG00000006541) CA12 (ENSPPYG00000006540) APH1B (ENSPPYG00000006539) #10 RAB8B (ENSPPYG00000006538) #11 ENSPPYG00000006537 LACTB (ENSPPYG00000006536) #13 TPM1 (ENSPPYG00000006534) #14 TLN2 (ENSPPYG00000006533) #16 ENSPPYG00000033556 C2CD4B (ENSPPYG00000006531) #18 C2CD4A (ENSPPYG00000006530) ##18 VPS13C (ENSPPYG00000006529) #19 RORA (ENSPPYG00000006528) #20 ICE2 (ENSPPYG00000006527) #21 ANXA2 (ENSPPYG00000006526) #22 FOXB1 (ENSPPYG00000006525) #23 ENSPPYG00000006524 #24 GTF2A2 (ENSPPYG00000006523) #25 FAM81A (ENSPPYG00000006521) #28 LDHAL6B (ENSPPYG00000006520) MYO1E (ENSPPYG00000006518) #30 CCNB2 (ENSPPYG00000006517) #32 RNF111 (ENSPPYG00000006516) #33 SLTM (ENSPPYG00000006515) #34 MINDY2 (ENSPPYG00000006514) #36 ADAM10 (ENSPPYG00000006512) #37 LIPC (ENSPPYG00000006511) AQP9 (ENSPPYG00000006510) ALDH1A2 (ENSPPYG00000006508) POLR2M (ENSPPYG00000032331) Platyrrhini ANCESTRAL SPECIES 27 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765.f ##18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A Cebidae ANCESTRAL SPECIES 29 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A Marmoset MODERN SPECIES 1 APH1B (ENSCJAG00000011305) #10 RAB8B (ENSCJAG00000042696) #11 ENSCJAG00000044434 LACTB (ENSCJAG00000004470) #13 TPM1 (ENSCJAG00000004355) #14 TLN2 (ENSCJAG00000004289) #16 ENSCJAG00000077304 C2CD4B (ENSCJAG00000041706) #18 C2CD4A (ENSCJAG00000004269) ##18 ENSCJAG00000072396 VPS13C (ENSCJAG00000004011) #19 ENSCJAG00000077316 ENSCJAG00000083525 RORA (ENSCJAG00000003989) #20 ICE2 (ENSCJAG00000003977) #21 ANXA2 (ENSCJAG00000003888) #22 ENSCJAG00000082396 FOXB1 (ENSCJAG00000023331) #23 ENSCJAG00000014722 #24 ENSCJAG00000082299 GCNT3 (ENSCJAG00000022726) #26 GTF2A2 (ENSCJAG00000015225) #25 FAM81A (ENSCJAG00000044349) #28 ENSCJAG00000073399 LDHAL6B (ENSCJAG00000054541) MYO1E (ENSCJAG00000001979) #30 CCNB2 (ENSCJAG00000047995) #32 RNF111 (ENSCJAG00000020373) #33 SLTM (ENSCJAG00000020395) #34 ENSCJAG00000075320 MINDY2 (ENSCJAG00000020424) #36 Cebidae_a ANCESTRAL SPECIES 39 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00510000047616.b.j ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00390000015930.w ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.jb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00940000163568.h ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Capuchin DUPLICATION Capuchin MODERN SPECIES 74 ICE2 (ENSCCAG00000038126) #21 ENSCCAG00000022577 #22 ENSCCAG00000018850 ENSCCAG00000033751 FOXB1 (ENSCCAG00000012040) #23 BNIP2 (ENSCCAG00000018887) #24 GTF2A2 (ENSCCAG00000027372) #25 FAM81A (ENSCCAG00000036641) #28 MYO1E (ENSCCAG00000037233) #30 CCNB2 (ENSCCAG00000022599) #32 RNF111 (ENSCCAG00000036251) #33 SLTM (ENSCCAG00000022982) #34 ENSCCAG00000034613 MINDY2 (ENSCCAG00000027011) #36 ENSCCAG00000019132 ADAM10 (ENSCCAG00000037950) #37 LIPC (ENSCCAG00000000841) Capuchin MODERN SPECIES 283 SULT1E1 (ENSCCAG00000026666) CSN1S1 (ENSCCAG00000027536) CSN2 (ENSCCAG00000024624) ENSCCAG00000024113 ENSCCAG00000033662 ODAM (ENSCCAG00000020390) FDCSP (ENSCCAG00000021650) CSN3 (ENSCCAG00000025487) SMR3A (ENSCCAG00000032893) OPRPN (ENSCCAG00000031483) MUC7 (ENSCCAG00000023162) AMTN (ENSCCAG00000027972) AMBN (ENSCCAG00000024239) ENAM (ENSCCAG00000036514) JCHAIN (ENSCCAG00000024639) ENSCCAG00000032555 #22 UTP3 (ENSCCAG00000032341) ENSCCAG00000021707 RUFY3 (ENSCCAG00000020050) GRSF1 (ENSCCAG00000028735) MOB1B (ENSCCAG00000021646) DCK (ENSCCAG00000023766) SLC4A4 (ENSCCAG00000028151) GC (ENSCCAG00000023704) NPFFR2 (ENSCCAG00000021517) ADAMTS3 (ENSCCAG00000034262) Bolivian squirrel monkey MODERN SPECIES 73 ENSSBOG00000024933 C2CD4A (ENSSBOG00000022275) ##18 ENSSBOG00000020451 VPS13C (ENSSBOG00000028193) #19 RORA (ENSSBOG00000018968) #20 ICE2 (ENSSBOG00000031514) #21 ANXA2 (ENSSBOG00000019958) #22 FOXB1 (ENSSBOG00000004847) #23 ENSSBOG00000035928 BNIP2 (ENSSBOG00000020953) #24 GTF2A2 (ENSSBOG00000029949) #25 FAM81A (ENSSBOG00000036216) #28 MYO1E (ENSSBOG00000033519) #30 ENSSBOG00000032233 #32 RNF111 (ENSSBOG00000024466) #33 SLTM (ENSSBOG00000018883) #34 ENSSBOG00000036232 MINDY2 (ENSSBOG00000020545) #36 ADAM10 (ENSSBOG00000032599) #37 LIPC (ENSSBOG00000025703) AQP9 (ENSSBOG00000033895) ALDH1A2 (ENSSBOG00000033307) Mas night monkey MODERN SPECIES 1045 APH1B (ENSANAG00000024233) #10 ENSANAG00000019426 RAB8B (ENSANAG00000014540) #11 ENSANAG00000020165 ENSANAG00000028244 LACTB (ENSANAG00000033008) #13 ENSANAG00000031826 TPM1 (ENSANAG00000030021) #14 TLN2 (ENSANAG00000038172) #16 ENSANAG00000030627 ##18 VPS13C (ENSANAG00000028331) #19 ENSANAG00000035524 RORA (ENSANAG00000024475) #20 ENSANAG00000028963 ICE2 (ENSANAG00000029936) #21 ANXA2 (ENSANAG00000023201) #22 ENSANAG00000014778 FOXB1 (ENSANAG00000004930) #23 BNIP2 (ENSANAG00000036618) #24 ENSANAG00000033630 #25 FAM81A (ENSANAG00000030930) #28 ENSANAG00000024145 MYO1E (ENSANAG00000031231) #30 ENSANAG00000034564 #32 RNF111 (ENSANAG00000030291) #33 SLTM (ENSANAG00000037031) #34 MINDY2 (ENSANAG00000028968) #36 ADAM10 (ENSANAG00000024000) #37 LIPC (ENSANAG00000032517) ALDH1A2 (ENSANAG00000021292) AQP9 (ENSANAG00000025076) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Caniformia ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Ursidae ANCESTRAL SPECIES ENSGT00940000154257.i.b #22 Giant Panda MODERN SPECIES 2014 ENSAMEG00000029811 #22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Primates ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 10 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000164895 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.a.b.b ENSGT01050000244827.C.c.a.a ENSGT00950000184824 ENSGT00390000018433.s.b ENSGT00940000154778 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000164895 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a ENSGT01050000244827.C.c.a.a Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467.g ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000164895 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a ENSGT01050000244827.C.c.a.a Hominidae ANCESTRAL SPECIES 12 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467.g ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a ENSGT01050000244827.C.c.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00730000111184.c ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467.g ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154778 ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00730000111184.c ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467.g ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154778 ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a Pan ANCESTRAL SPECIES 7 ENSGT00730000111184.c ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467.g ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154778 ENSGT00940000154568.q.a.a.b ENSGT00390000003245.i.a Bonobo MODERN SPECIES 17 MAP9 (ENSPPAG00000013128) NPY2R (ENSPPAG00000008082) RBM46 (ENSPPAG00000043236) LRAT (ENSPPAG00000041598) FGG (ENSPPAG00000041183) ENSPPAG00000033202 FGB (ENSPPAG00000032537) PLRG1 (ENSPPAG00000030351) ENSPPAG00000035256 SFRP2 (ENSPPAG00000032563) RNF175 (ENSPPAG00000042666) TLR2 (ENSPPAG00000026253) ENSPPAG00000043739 TMEM131L (ENSPPAG00000035999) MND1 (ENSPPAG00000032409) ENSPPAG00000040974 ##22 TRIM2 (ENSPPAG00000038637) FHDC1 (ENSPPAG00000028121) ENSPPAG00000043551 ARFIP1 (ENSPPAG00000031157) TIGD4 (ENSPPAG00000012681) TMEM154 (ENSPPAG00000036040) FBXW7 (ENSPPAG00000035178) GATB (ENSPPAG00000041690) FHIP1A (ENSPPAG00000032398) PRSS48 (ENSPPAG00000037675) ENSPPAG00000044129 ENSPPAG00000044109 ENSPPAG00000044108 ENSPPAG00000044106 MAB21L2 (ENSPPAG00000024444) Chimpanzee MODERN SPECIES 17 MAP9 (ENSPTRG00000016540) NPY2R (ENSPTRG00000016539) RBM46 (ENSPTRG00000016538) LRAT (ENSPTRG00000016537) FGG (ENSPTRG00000016536) FGA (ENSPTRG00000016535) FGB (ENSPTRG00000016534) PLRG1 (ENSPTRG00000016533) ENSPTRG00000016532 SFRP2 (ENSPTRG00000016530) RNF175 (ENSPTRG00000016529) TLR2 (ENSPTRG00000016528) ENSPTRG00000052408 TMEM131L (ENSPTRG00000016527) MND1 (ENSPTRG00000016524) ENSPTRG00000043478 ##22 TRIM2 (ENSPTRG00000016522) FHDC1 (ENSPTRG00000016521) ENSPTRG00000016520 ARFIP1 (ENSPTRG00000016519) TIGD4 (ENSPTRG00000016518) FBXW7 (ENSPTRG00000016514) GATB (ENSPTRG00000016513) FHIP1A (ENSPTRG00000016512) PRSS48 (ENSPTRG00000016510) SH3D19 (ENSPTRG00000016509) RPS3A (ENSPTRG00000046168) ENSPTRG00000044700 ENSPTRG00000052157 ENSPTRG00000047882 ENSPTRG00000049102 Gorilla MODERN SPECIES 17 NPY2R (ENSGGOG00000012928) RBM46 (ENSGGOG00000001876) LRAT (ENSGGOG00000001772) FGG (ENSGGOG00000011928) ENSGGOG00000037350 ENSGGOG00000026321 FGB (ENSGGOG00000014050) PLRG1 (ENSGGOG00000014469) ENSGGOG00000001442 SFRP2 (ENSGGOG00000001696) RNF175 (ENSGGOG00000008030) TLR2 (ENSGGOG00000003066) ENSGGOG00000043385 TMEM131L (ENSGGOG00000003778) MND1 (ENSGGOG00000023104) ENSGGOG00000027243 ##22 TRIM2 (ENSGGOG00000007303) FHDC1 (ENSGGOG00000006436) ENSGGOG00000043918 ARFIP1 (ENSGGOG00000008153) TIGD4 (ENSGGOG00000011836) TMEM154 (ENSGGOG00000024800) FBXW7 (ENSGGOG00000024434) GATB (ENSGGOG00000011099) FHIP1A (ENSGGOG00000016578) PRSS48 (ENSGGOG00000008111) SH3D19 (ENSGGOG00000010733) RPS3A (ENSGGOG00000003182) ENSGGOG00000043224 ENSGGOG00000011073 MAB21L2 (ENSGGOG00000014090) Orangutan MODERN SPECIES 17 NPY2R (ENSPPYG00000015282) RBM46 (ENSPPYG00000015144) LRAT (ENSPPYG00000036708) FGG (ENSPPYG00000015141) ENSPPYG00000029929 FGB (ENSPPYG00000015139) PLRG1 (ENSPPYG00000015138) ENSPPYG00000015136 ENSPPYG00000039468 SFRP2 (ENSPPYG00000015133) RNF175 (ENSPPYG00000015132) TLR2 (ENSPPYG00000015131) ENSPPYG00000036033 TMEM131L (ENSPPYG00000015130) MND1 (ENSPPYG00000015129) ENSPPYG00000039576 ##22 TRIM2 (ENSPPYG00000015128) FHDC1 (ENSPPYG00000015127) ENSPPYG00000039750 ARFIP1 (ENSPPYG00000015126) TIGD4 (ENSPPYG00000015125) TMEM154 (ENSPPYG00000015124) FBXW7 (ENSPPYG00000015122) GATB (ENSPPYG00000015121) FHIP1A (ENSPPYG00000015120) PRSS48 (ENSPPYG00000015119) SH3D19 (ENSPPYG00000015118) RPS3A (ENSPPYG00000025869) ENSPPYG00000035707 ENSPPYG00000031388 MAB21L2 (ENSPPYG00000015117) Gibbon MODERN SPECIES 22 MAP9 (ENSNLEG00000006192) NPY2R (ENSNLEG00000035895) RBM46 (ENSNLEG00000006184) LRAT (ENSNLEG00000031736) FGG (ENSNLEG00000006132) ENSNLEG00000006118 FGB (ENSNLEG00000006050) PLRG1 (ENSNLEG00000006023) ENSNLEG00000026943 ENSNLEG00000006005 SFRP2 (ENSNLEG00000006001) RNF175 (ENSNLEG00000005995) TLR2 (ENSNLEG00000018926) TMEM131L (ENSNLEG00000005942) MND1 (ENSNLEG00000005936) ENSNLEG00000030881 ##22 ENSNLEG00000005935 TRIM2 (ENSNLEG00000005924) FHDC1 (ENSNLEG00000005922) ENSNLEG00000005921 ARFIP1 (ENSNLEG00000005906) TIGD4 (ENSNLEG00000005902) TMEM154 (ENSNLEG00000032380) FBXW7 (ENSNLEG00000005860) GATB (ENSNLEG00000005836) FHIP1A (ENSNLEG00000005829) PRSS48 (ENSNLEG00000005825) SH3D19 (ENSNLEG00000005818) ENSNLEG00000005815 ENSNLEG00000032859 MAB21L2 (ENSNLEG00000035778) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b ENSGT00390000003245.i.a Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000153377.B.f ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000153377.B.f ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b Macaca ANCESTRAL SPECIES 18 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000153377.B.f ENSGT00940000153311.a.b.a.fb.a.a.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b ENSGT01050000244827.C.c.a.a Pig-tailed macaque MODERN SPECIES 306 ENSMNEG00000034287 CHIC2 (ENSMNEG00000028920) RBM46 (ENSMNEG00000002787) LRAT (ENSMNEG00000014904) FGG (ENSMNEG00000038909) ENSMNEG00000034578 FGB (ENSMNEG00000036263) PLRG1 (ENSMNEG00000042073) ENSMNEG00000045502 SFRP2 (ENSMNEG00000038959) RNF175 (ENSMNEG00000040105) TLR2 (ENSMNEG00000007084) ENSMNEG00000017763 TMEM131L (ENSMNEG00000032766) MND1 (ENSMNEG00000045163) ENSMNEG00000028298 ##22 TRIM2 (ENSMNEG00000045339) ENSMNEG00000020352 ENSMNEG00000028849 FHDC1 (ENSMNEG00000041726) ARFIP1 (ENSMNEG00000032244) TIGD4 (ENSMNEG00000019365) TMEM154 (ENSMNEG00000043952) FBXW7 (ENSMNEG00000034815) GATB (ENSMNEG00000040147) FHIP1A (ENSMNEG00000036401) PRSS48 (ENSMNEG00000041329) SH3D19 (ENSMNEG00000039541) ENSMNEG00000037276 ENSMNEG00000008812 MAB21L2 (ENSMNEG00000002873) Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000153377.B.f ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b Cercopithecinae_d ANCESTRAL SPECIES 21 ENSGT00910000147911 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000153377.B.f ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b Sooty mangabey MODERN SPECIES 575 RBM46 (ENSCATG00000040148) LRAT (ENSCATG00000036899) FGG (ENSCATG00000038771) ENSCATG00000029906 FGB (ENSCATG00000035392) PLRG1 (ENSCATG00000044329) DCHS2 (ENSCATG00000036853) SFRP2 (ENSCATG00000044051) RNF175 (ENSCATG00000037488) TLR2 (ENSCATG00000022673) TMEM131L (ENSCATG00000015608) MND1 (ENSCATG00000041976) TRIM2 (ENSCATG00000040189) ENSCATG00000040320 ##22 ENSCATG00000022750 FHDC1 (ENSCATG00000041321) ENSCATG00000025962 ARFIP1 (ENSCATG00000036832) TIGD4 (ENSCATG00000023010) TMEM154 (ENSCATG00000034714) FBXW7 (ENSCATG00000040206) GATB (ENSCATG00000034281) FHIP1A (ENSCATG00000043916) ENSCATG00000016011 SH3D19 (ENSCATG00000040234) PRSS48 (ENSCATG00000033095) RPS3A (ENSCATG00000029484) ENSCATG00000009094 LRBA (ENSCATG00000036910) Drill MODERN SPECIES 1625 SFRP2 (ENSMLEG00000039666) RNF175 (ENSMLEG00000043415) TLR2 (ENSMLEG00000000377) ENSMLEG00000044073 TMEM131L (ENSMLEG00000033932) MND1 (ENSMLEG00000028835) TRIM2 (ENSMLEG00000029510) ENSMLEG00000042192 ##22 Rhinopithecus ANCESTRAL SPECIES 100 ENSGT00940000155973.b ENSGT00940000155927 ENSGT00510000047351.b ENSGT00390000002414.`b.a.a.d.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000164895 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00940000155657.db.a.b ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000168500 ENSGT00940000155128.a.b ENSGT00500000044916.g.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00390000006095.t ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT00940000154568.q.a.a.b.b Golden snub-nosed monkey MODERN SPECIES 2379 DCHS2 (ENSRROG00000041567) ENSRROG00000043977 ENSRROG00000013085 SFRP2 (ENSRROG00000009867) RNF175 (ENSRROG00000016003) TLR2 (ENSRROG00000026829) ENSRROG00000039423 TMEM131L (ENSRROG00000041482) MND1 (ENSRROG00000044802) ENSRROG00000042774 ##22 TRIM2 (ENSRROG00000028108) ENSRROG00000042265 FHDC1 (ENSRROG00000031320) ENSRROG00000044172 ARFIP1 (ENSRROG00000043941) TIGD4 (ENSRROG00000020595) TMEM154 (ENSRROG00000045444) FBXW7 (ENSRROG00000045463) Black snub-nosed monkey MODERN SPECIES 358 LRAT (ENSRBIG00000031259) ENSRBIG00000002959 FGG (ENSRBIG00000041103) ENSRBIG00000043966 FGB (ENSRBIG00000035008) PLRG1 (ENSRBIG00000041191) ENSRBIG00000036118 ENSRBIG00000036371 SFRP2 (ENSRBIG00000010763) RNF175 (ENSRBIG00000038219) TLR2 (ENSRBIG00000002464) ENSRBIG00000036616 TMEM131L (ENSRBIG00000025439) MND1 (ENSRBIG00000036568) TRIM2 (ENSRBIG00000032464) ENSRBIG00000041487 ##22 ENSRBIG00000038361 FHDC1 (ENSRBIG00000012007) ENSRBIG00000043174 ARFIP1 (ENSRBIG00000027072) TIGD4 (ENSRBIG00000014613) TMEM154 (ENSRBIG00000039822) FBXW7 (ENSRBIG00000035783) GATB (ENSRBIG00000006453) FHIP1A (ENSRBIG00000032166) ENSRBIG00000039614 PRSS48 (ENSRBIG00000035216) SH3D19 (ENSRBIG00000043149) RPS3A (ENSRBIG00000031506) ENSRBIG00000039102 ENSRBIG00000044387 Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000158285 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927.i ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413.a.a.a ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.a.b.b ENSGT01050000244827.C.c.a.a ENSGT00950000184824 ENSGT00940000154778 ENSGT00940000154895.a.a Cebidae ANCESTRAL SPECIES 4 ENSGT00940000158285 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927.i ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000162999 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413.a.a.a ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.a.b.b ENSGT01050000244827.C.c.a.a ENSGT00950000184824 ENSGT00940000154778 ENSGT00940000154895.a.a Cebidae_a ANCESTRAL SPECIES 49 ENSGT00940000157483 ENSGT00940000158285 ENSGT00730000111184 ENSGT00940000155973.b ENSGT00940000155927.j ENSGT00510000047351.b ENSGT00940000158467 ENSGT00940000157467 ENSGT00940000158122 ENSGT00940000155316 ENSGT00940000156432.a ENSGT00390000013075.b ENSGT00940000156323 ENSGT00530000063614.a.b ENSGT00490000043413.a.a.a ENSGT00940000154257.i.a.a ##22 ENSGT00940000155905.a ENSGT00940000155128.a.b ENSGT00950000182987.c.a.a.u.a.b ENSGT00950000183040.A.b ENSGT00940000160195.b.b ENSGT00390000016183 ENSGT00940000154986 ENSGT00390000016644 ENSGT00950000182936.a.a.b ENSGT00940000160791.A ENSGT00940000155694 ENSGT00390000018433.s.b ENSGT01050000244827.C.c.a.a ENSGT00950000184824 ENSGT00940000154778 Capuchin MODERN SPECIES 251 MAP9 (ENSCCAG00000032529) NPY2R (ENSCCAG00000017441) ENSCCAG00000022596 ENSCCAG00000027619 ENSCCAG00000005096 LRAT (ENSCCAG00000028075) FGG (ENSCCAG00000020729) ENSCCAG00000033876 FGB (ENSCCAG00000018250) PLRG1 (ENSCCAG00000030259) SFRP2 (ENSCCAG00000027729) RNF175 (ENSCCAG00000032466) TLR2 (ENSCCAG00000035932) TMEM131L (ENSCCAG00000030421) ENSCCAG00000033570 ENSCCAG00000024557 ##22 TRIM2 (ENSCCAG00000023128) FHDC1 (ENSCCAG00000003243) ENSCCAG00000028690 ARFIP1 (ENSCCAG00000025148) TMEM154 (ENSCCAG00000036071) FBXW7 (ENSCCAG00000023612) Bolivian squirrel monkey MODERN SPECIES 68 NPY2R (ENSSBOG00000021389) RBM46 (ENSSBOG00000033028) LRAT (ENSSBOG00000032657) FGG (ENSSBOG00000012871) ENSSBOG00000030142 FGB (ENSSBOG00000030250) PLRG1 (ENSSBOG00000023220) SFRP2 (ENSSBOG00000025155) RNF175 (ENSSBOG00000023059) ENSSBOG00000018928 TMEM131L (ENSSBOG00000018532) ENSSBOG00000020715 ENSSBOG00000021870 ENSSBOG00000034429 TRIM2 (ENSSBOG00000008537) ENSSBOG00000019005 ##22 ENSSBOG00000019364 FHDC1 (ENSSBOG00000032341) ENSSBOG00000022577 ARFIP1 (ENSSBOG00000029200) ENSSBOG00000034828 TIGD4 (ENSSBOG00000019445) TMEM154 (ENSSBOG00000020640) FBXW7 (ENSSBOG00000028715) ENSSBOG00000013483 GATB (ENSSBOG00000022495) FHIP1A (ENSSBOG00000025309) SH3D19 (ENSSBOG00000029208) PRSS48 (ENSSBOG00000035708) ENSSBOG00000023852 LRBA (ENSSBOG00000032154) Mas night monkey MODERN SPECIES 1090 NPY2R (ENSANAG00000031448) RBM46 (ENSANAG00000029193) LRAT (ENSANAG00000029147) FGG (ENSANAG00000030028) ENSANAG00000022740 FGB (ENSANAG00000033162) PLRG1 (ENSANAG00000036805) DCHS2 (ENSANAG00000032762) ENSANAG00000036973 SFRP2 (ENSANAG00000021159) RNF175 (ENSANAG00000029450) TMEM131L (ENSANAG00000022263) ENSANAG00000019522 ENSANAG00000035846 TRIM2 (ENSANAG00000033669) ENSANAG00000026430 ##22 FHDC1 (ENSANAG00000036159) ENSANAG00000027141 ARFIP1 (ENSANAG00000032224) TIGD4 (ENSANAG00000018977) TMEM154 (ENSANAG00000034998) FBXW7 (ENSANAG00000033087) Simiiformes ANCESTRAL SPECIES ENSGT00940000154257.i.a.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00940000154257.i.a.b ##22 Hominoidea ANCESTRAL SPECIES 73 ENSGT00530000063909.b.o ENSGT00940000154257.i.a.b ##22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a Hominidae ANCESTRAL SPECIES 65 ENSGT00530000063909.b.o ENSGT00940000154257.i.a.b ##22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 68 ENSGT00530000063909.b.o ENSGT00940000154257.i.a.b ##22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a Homo/Pan group ANCESTRAL SPECIES 68 ENSGT00530000063909.b.o ENSGT00940000154257.i.a.b ##22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a Pan ANCESTRAL SPECIES 16 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.t.a.a ENSGT00390000000984.t.b ENSGT00940000158210 ENSGT00940000156272.h ENSGT00950000182810.B.a.x.b.a ENSGT00940000158794 ENSGT00530000063909.b.o ENSGT00940000154257.i.a.b ##22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a ENSGT00940000160543 ENSGT01030000234543.B.f ENSGT00940000154773.p ENSGT00940000159378 ENSGT00940000163824.a ENSGT00940000159406 ENSGT00940000155046.t.h ENSGT00940000158924 ENSGT00940000153441.a.b ENSGT00940000161556 ENSGT00390000017595 ENSGT00940000157720 ENSGT00940000155595 ENSGT00780000122010 Bonobo MODERN SPECIES 1 RHOBTB1 (ENSPPAG00000043669) TMEM26 (ENSPPAG00000042231) ENSPPAG00000043572 ARID5B (ENSPPAG00000038387) RTKN2 (ENSPPAG00000032579) ZNF365 (ENSPPAG00000034684) ENSPPAG00000026642 EGR2 (ENSPPAG00000036067) ENSPPAG00000028338 JMJD1C (ENSPPAG00000043117) ENSPPAG00000040277 ENSPPAG00000029932 REEP3 (ENSPPAG00000014795) ENSPPAG00000030172 ENSPPAG00000030313 ENSPPAG00000030704 ##22 ENSPPAG00000038968 CTNNA3 (ENSPPAG00000036801) LRRTM3 (ENSPPAG00000038363) ENSPPAG00000024995 DNAJC12 (ENSPPAG00000000220) ENSPPAG00000042412 SIRT1 (ENSPPAG00000026426) HERC4 (ENSPPAG00000036256) ENSPPAG00000027229 MYPN (ENSPPAG00000026801) PBLD (ENSPPAG00000043142) HNRNPH3 (ENSPPAG00000033764) RUFY2 (ENSPPAG00000029488) DNA2 (ENSPPAG00000037011) SLC25A16 (ENSPPAG00000043641) Chimpanzee MODERN SPECIES 1 RHOBTB1 (ENSPTRG00000002529) TMEM26 (ENSPTRG00000002530) CABCOCO1 (ENSPTRG00000002532) ARID5B (ENSPTRG00000002534) RTKN2 (ENSPTRG00000002536) ZNF365 (ENSPTRG00000002537) ENSPTRG00000044896 ADO (ENSPTRG00000040986) EGR2 (ENSPTRG00000002538) NRBF2 (ENSPTRG00000002539) JMJD1C (ENSPTRG00000002540) ENSPTRG00000020568 REEP3 (ENSPTRG00000002543) ENSPTRG00000043198 ENSPTRG00000044974 ENSPTRG00000047641 ##22 ENSPTRG00000051291 CTNNA3 (ENSPTRG00000002544) LRRTM3 (ENSPTRG00000002545) ENSPTRG00000046759 DNAJC12 (ENSPTRG00000002546) ENSPTRG00000044940 SIRT1 (ENSPTRG00000002548) HERC4 (ENSPTRG00000002549) MYPN (ENSPTRG00000002550) ATOH7 (ENSPTRG00000002551) PBLD (ENSPTRG00000002552) HNRNPH3 (ENSPTRG00000002553) RUFY2 (ENSPTRG00000002554) DNA2 (ENSPTRG00000002556) SLC25A16 (ENSPTRG00000002557) Gorilla MODERN SPECIES 1 TMEM26 (ENSGGOG00000003595) ENSGGOG00000011328 ARID5B (ENSGGOG00000004127) RTKN2 (ENSGGOG00000016938) ZNF365 (ENSGGOG00000013216) ENSGGOG00000041727 ADO (ENSGGOG00000005286) EGR2 (ENSGGOG00000005292) ENSGGOG00000013016 ENSGGOG00000040996 JMJD1C (ENSGGOG00000015694) ENSGGOG00000025033 REEP3 (ENSGGOG00000008217) ENSGGOG00000025516 ENSGGOG00000022173 ENSGGOG00000006481 ##22 ENSGGOG00000042340 LRRTM3 (ENSGGOG00000026152) CTNNA3 (ENSGGOG00000039427) ENSGGOG00000025461 DNAJC12 (ENSGGOG00000015053) SIRT1 (ENSGGOG00000010187) HERC4 (ENSGGOG00000008249) MYPN (ENSGGOG00000005699) ATOH7 (ENSGGOG00000016464) PBLD (ENSGGOG00000009363) HNRNPH3 (ENSGGOG00000025378) RUFY2 (ENSGGOG00000000118) ENSGGOG00000010645 ENSGGOG00000036980 SLC25A16 (ENSGGOG00000014517) Gibbon MODERN SPECIES 8 TMEM26 (ENSNLEG00000029233) ENSNLEG00000012116 ARID5B (ENSNLEG00000012110) RTKN2 (ENSNLEG00000012090) ZNF365 (ENSNLEG00000012085) ENSNLEG00000030111 ENSNLEG00000033805 EGR2 (ENSNLEG00000027205) ENSNLEG00000028047 JMJD1C (ENSNLEG00000012049) ENSNLEG00000031005 REEP3 (ENSNLEG00000027332) ENSNLEG00000028410 ENSNLEG00000031459 ENSNLEG00000018641 ENSNLEG00000027335 ##22 ENSNLEG00000035775 CTNNA3 (ENSNLEG00000012042) LRRTM3 (ENSNLEG00000012035) ENSNLEG00000012033 DNAJC12 (ENSNLEG00000012018) ENSNLEG00000030601 SIRT1 (ENSNLEG00000012003) HERC4 (ENSNLEG00000011935) ENSNLEG00000034531 ENSNLEG00000011872 ATOH7 (ENSNLEG00000030262) PBLD (ENSNLEG00000011858) HNRNPH3 (ENSNLEG00000011843) RUFY2 (ENSNLEG00000011835) ENSNLEG00000030777 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154257.i.a.b ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000154257.i.a.b ##22 Black snub-nosed monkey MODERN SPECIES 586 ENSRBIG00000043365 ZNF365 (ENSRBIG00000020873) ENSRBIG00000012841 ADO (ENSRBIG00000027588) EGR2 (ENSRBIG00000031709) ENSRBIG00000001190 ENSRBIG00000023798 JMJD1C (ENSRBIG00000023967) REEP3 (ENSRBIG00000040518) ENSRBIG00000039137 ##22 ENSRBIG00000042554 ENSRBIG00000028859 ENSRBIG00000000807 FBN2 (ENSRBIG00000037592) SLC12A2 (ENSRBIG00000041699) CCDC192 (ENSRBIG00000029179) Golden snub-nosed monkey MODERN SPECIES 149 ENSRROG00000032732 ##22 ENSRROG00000042847 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Bushbaby MODERN SPECIES 126 USP3 (ENSOGAG00000013129) ENSOGAG00000030840 CA12 (ENSOGAG00000002515) APH1B (ENSOGAG00000034676) #10 RAB8B (ENSOGAG00000002514) #11 ENSOGAG00000002513 LACTB (ENSOGAG00000026764) #13 ENSOGAG00000029885 TPM1 (ENSOGAG00000002509) #14 TLN2 (ENSOGAG00000016126) #16 ENSOGAG00000032289 #18 ENSOGAG00000028784 #18 VPS13C (ENSOGAG00000002114) #19 RORA (ENSOGAG00000007357) #20 ICE2 (ENSOGAG00000007354) #21 ENSOGAG00000009952 ##22 ENSOGAG00000027159 ENSOGAG00000025065 FOXB1 (ENSOGAG00000007643) #23 BNIP2 (ENSOGAG00000007065) #24 GTF2A2 (ENSOGAG00000007061) #25 GCNT3 (ENSOGAG00000014633) #26 FAM81A (ENSOGAG00000012897) #28 MYO1E (ENSOGAG00000012887) #30 CCNB2 (ENSOGAG00000012885) #32 RNF111 (ENSOGAG00000009278) #33 SLTM (ENSOGAG00000011297) #34 ENSOGAG00000029975 #36 ADAM10 (ENSOGAG00000004350) #37 LIPC (ENSOGAG00000033011) ENSOGAG00000027328 Lemuriformes ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Coquerels sifaka MODERN SPECIES 729 RORA (ENSPCOG00000023514) #20 ICE2 (ENSPCOG00000021818) #21 ENSPCOG00000019595 ##22 FOXB1 (ENSPCOG00000006338) #23 BNIP2 (ENSPCOG00000013836) #24 ENSPCOG00000017610 #25 FAM81A (ENSPCOG00000008691) #28 MYO1E (ENSPCOG00000013210) #30 CCNB2 (ENSPCOG00000023161) #32 RNF111 (ENSPCOG00000025013) #33 SLTM (ENSPCOG00000010624) #34 MINDY2 (ENSPCOG00000027791) #36 ADAM10 (ENSPCOG00000022185) #37 LIPC (ENSPCOG00000020000) AQP9 (ENSPCOG00000022893) ALDH1A2 (ENSPCOG00000025133) ENSPCOG00000024884 MYZAP (ENSPCOG00000024273) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Tree shrew MODERN SPECIES 4395 RORA (ENSTBEG00000003065) #20 ICE2 (ENSTBEG00000001845) #21 ENSTBEG00000001276 ##22 Glires ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A Pika MODERN SPECIES 3909 ENSOPRG00000012364 #20 ENSOPRG00000012338 #21 ENSOPRG00000012327 ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00940000154257.i.a ##22 Lesser Egyptian jerboa MODERN SPECIES 92 ENSJJAG00000014166 Dapk2 (ENSJJAG00000017017) Herc1 (ENSJJAG00000011445) Fbxl22 (ENSJJAG00000005076) Usp3 (ENSJJAG00000023661) Car12 (ENSJJAG00000013683) ENSJJAG00000018987 #10 Rab8b (ENSJJAG00000016477) #11 ENSJJAG00000021616 #12 Lactb (ENSJJAG00000009980) #13 Tpm1 (ENSJJAG00000022370) #14 Tln2 (ENSJJAG00000016766) #16 Vps13c (ENSJJAG00000012718) #19 Rora (ENSJJAG00000018794) #20 ENSJJAG00000019838 #21 Anxa2 (ENSJJAG00000008193) ##22 Foxb1 (ENSJJAG00000010310) #23 Bnip2 (ENSJJAG00000012193) #24 ENSJJAG00000016236 #25 Fam81a (ENSJJAG00000021870) #28 Myo1e (ENSJJAG00000010416) #30 Ccnb2 (ENSJJAG00000022154) #32 Rnf111 (ENSJJAG00000013647) #33 Sltm (ENSJJAG00000006970) #34 Mindy2 (ENSJJAG00000015879) #36 Adam10 (ENSJJAG00000020483) #37 Lipc (ENSJJAG00000016366) Aqp9 (ENSJJAG00000003289) Aldh1a2 (ENSJJAG00000019176) Myzap (ENSJJAG00000003683) Cgnl1 (ENSJJAG00000002516) Kangaroo rat MODERN SPECIES 322 Lgr5 (ENSDORG00000006266) ENSDORG00000028010 ENSDORG00000028837 Thap2 (ENSDORG00000006270) Tmem19 (ENSDORG00000001530) ENSDORG00000004732 Tbc1d15 (ENSDORG00000003464) Tph2 (ENSDORG00000000779) ENSDORG00000028797 ENSDORG00000013399 Atxn7l3b (ENSDORG00000025438) Kcnc2 (ENSDORG00000000056) ENSDORG00000027121 Glipr1 (ENSDORG00000004613) ENSDORG00000004614 ENSDORG00000023399 ##22 Phlda1 (ENSDORG00000027757) Nap1l1 (ENSDORG00000029138) Bbs10 (ENSDORG00000000668) Osbpl8 (ENSDORG00000000670) Zdhhc17 (ENSDORG00000012435) Csrp2 (ENSDORG00000012441) ENSDORG00000026154 Nav3 (ENSDORG00000011080) Syt1 (ENSDORG00000003724) Pawr (ENSDORG00000029489) Ppp1r12a (ENSDORG00000007157) Otogl (ENSDORG00000028677) Ptprq (ENSDORG00000023208) Myf6 (ENSDORG00000015435) Myf5 (ENSDORG00000015437) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000044085 ENSHGLG00000014469 CA12 (ENSHGLG00000036575) APH1B (ENSHGLG00000031885) #10 ENSHGLG00000042104 RAB8B (ENSHGLG00000049367) #11 ENSHGLG00000008830 #12 LACTB (ENSHGLG00000049143) #13 ENSHGLG00000013579 #14 ENSHGLG00000006753 #16 ENSHGLG00000032199 ENSHGLG00000048789 ENSHGLG00000005786 #19 RORA (ENSHGLG00000010547) #20 NARG2 (ENSHGLG00000041744) #21 ENSHGLG00000008172 ##22 ENSHGLG00000038903 FOXB1 (ENSHGLG00000018464) #23 ENSHGLG00000006545 #24 ENSHGLG00000045803 GTF2A2 (ENSHGLG00000037685) #25 GCNT3 (ENSHGLG00000048945) #26 FAM81A (ENSHGLG00000013990) #28 ENSHGLG00000042902 MYO1E (ENSHGLG00000015124) #30 ENSHGLG00000015169 #32 RNF111 (ENSHGLG00000017832) #33 ENSHGLG00000018512 #34 MINDY2 (ENSHGLG00000005567) #36 ADAM10 (ENSHGLG00000008761) #37 ENSHGLG00000042059 Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Guinea pig MODERN SPECIES 101 VPS13C (ENSCPOG00000000102) #19 RORA (ENSCPOG00000008494) #20 ICE2 (ENSCPOG00000008486) #21 ENSCPOG00000006400 ##22 FOXB1 (ENSCPOG00000020128) #23 BNIP2 (ENSCPOG00000004962) #24 GTF2A2 (ENSCPOG00000035441) #25 GCNT3 (ENSCPOG00000022353) #26 FAM81A (ENSCPOG00000015628) #28 MYO1E (ENSCPOG00000002570) #30 CCNB2 (ENSCPOG00000026977) #32 RNF111 (ENSCPOG00000010550) #33 SLTM (ENSCPOG00000026109) #34 MINDY2 (ENSCPOG00000002287) #36 CLPX (ENSCPOG00000003391) CILP (ENSCPOG00000036223) PARP16 (ENSCPOG00000025232) IGDCC3 (ENSCPOG00000006751) IGDCC4 (ENSCPOG00000004519) Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.dd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Long-tailed chinchilla MODERN SPECIES 157 HERC1 (ENSCLAG00000016354) FBXL22 (ENSCLAG00000014965) USP3 (ENSCLAG00000012461) CA12 (ENSCLAG00000009814) APH1B (ENSCLAG00000014885) #10 RAB8B (ENSCLAG00000010690) #11 RPS27L (ENSCLAG00000010811) #12 LACTB (ENSCLAG00000007519) #13 TPM1 (ENSCLAG00000008921) #14 TLN2 (ENSCLAG00000009840) #16 ENSCLAG00000016591 VPS13C (ENSCLAG00000006472) #19 RORA (ENSCLAG00000012113) #20 ENSCLAG00000012071 #21 ENSCLAG00000008269 #21 ENSCLAG00000007067 ##22 FOXB1 (ENSCLAG00000009811) #23 BNIP2 (ENSCLAG00000010658) #24 ENSCLAG00000007616 #25 GCNT3 (ENSCLAG00000017684) #26 FAM81A (ENSCLAG00000008454) #28 MYO1E (ENSCLAG00000008802) #30 CCNB2 (ENSCLAG00000008353) #32 RNF111 (ENSCLAG00000008225) #33 SLTM (ENSCLAG00000007160) #34 MINDY2 (ENSCLAG00000007672) #36 ADAM10 (ENSCLAG00000008259) #37 LIPC (ENSCLAG00000009019) AQP9 (ENSCLAG00000007276) ALDH1A2 (ENSCLAG00000008024) POLR2M (ENSCLAG00000006251) Degu MODERN SPECIES 67 HERC1 (ENSODEG00000016719) FBXL22 (ENSODEG00000016765) USP3 (ENSODEG00000017024) CA12 (ENSODEG00000016537) APH1B (ENSODEG00000016784) #10 RAB8B (ENSODEG00000016571) #11 ENSODEG00000016936 #12 LACTB (ENSODEG00000016877) #13 TPM1 (ENSODEG00000017042) #14 TLN2 (ENSODEG00000016531) #16 ENSODEG00000016956 ENSODEG00000020499 VPS13C (ENSODEG00000017192) #19 RORA (ENSODEG00000016932) #20 ICE2 (ENSODEG00000017266) #21 ENSODEG00000017529 ##22 FOXB1 (ENSODEG00000016892) #23 ENSODEG00000017110 #24 ENSODEG00000017154 #25 ENSODEG00000016827 #28 MYO1E (ENSODEG00000016979) #30 ENSODEG00000017886 CCNB2 (ENSODEG00000016886) #32 RNF111 (ENSODEG00000017237) #33 SLTM (ENSODEG00000017077) #34 MINDY2 (ENSODEG00000017214) #36 ADAM10 (ENSODEG00000017007) #37 LIPC (ENSODEG00000017170) AQP9 (ENSODEG00000016950) ALDH1A2 (ENSODEG00000017335) MYZAP (ENSODEG00000017200) Sciuridae ANCESTRAL SPECIES 11 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765.h #18 ENSGT00940000163765.g #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Marmotini ANCESTRAL SPECIES 9 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765.h #18 ENSGT00940000163765.g #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765.h #18 ENSGT00940000163765.g #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.i.a ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.pb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Arctic ground squirrel MODERN SPECIES 33 HERC1 (ENSUPAG00010020206) FBXL22 (ENSUPAG00010020202) USP3 (ENSUPAG00010020157) CA12 (ENSUPAG00010020142) APH1B (ENSUPAG00010020133) #10 RAB8B (ENSUPAG00010020124) #11 RPS27L (ENSUPAG00010020117) #12 LACTB (ENSUPAG00010020113) #13 TPM1 (ENSUPAG00010020041) #14 TLN2 (ENSUPAG00010019892) #16 ENSUPAG00010019882 #18 ENSUPAG00010019880 #18 VPS13C (ENSUPAG00010019706) #19 RORA (ENSUPAG00010019675) #20 ICE2 (ENSUPAG00010019658) #21 ENSUPAG00010019652 ##22 FOXB1 (ENSUPAG00010019648) #23 BNIP2 (ENSUPAG00010019641) #24 GTF2A2 (ENSUPAG00010019628) #25 GCNT3 (ENSUPAG00010019625) #26 FAM81A (ENSUPAG00010019613) #28 MYO1E (ENSUPAG00010019578) #30 ENSUPAG00010019571 #32 RNF111 (ENSUPAG00010019547) #33 SLTM (ENSUPAG00010019462) #34 MINDY2 (ENSUPAG00010019437) #36 ADAM10 (ENSUPAG00010019425) #37 LIPC (ENSUPAG00010019417) AQP9 (ENSUPAG00010019410) ALDH1A2 (ENSUPAG00010019398) POLR2M (ENSUPAG00010019395) Squirrel MODERN SPECIES 71 DAPK2 (ENSSTOG00000016080) HERC1 (ENSSTOG00000016063) FBXL22 (ENSSTOG00000016061) USP3 (ENSSTOG00000016055) CA12 (ENSSTOG00000016051) APH1B (ENSSTOG00000016049) #10 RAB8B (ENSSTOG00000016046) #11 RPS27L (ENSSTOG00000014532) #12 LACTB (ENSSTOG00000009971) #13 TPM1 (ENSSTOG00000009955) #14 TLN2 (ENSSTOG00000014824) #16 ENSSTOG00000003290 #18 VPS13C (ENSSTOG00000003166) #19 RORA (ENSSTOG00000012400) #20 ENSSTOG00000032826 #21 ENSSTOG00000023376 ##22 FOXB1 (ENSSTOG00000020458) #23 BNIP2 (ENSSTOG00000020930) #24 GTF2A2 (ENSSTOG00000004010) #25 GCNT3 (ENSSTOG00000004004) #26 FAM81A (ENSSTOG00000005017) #28 MYO1E (ENSSTOG00000001282) #30 ENSSTOG00000001275 #32 RNF111 (ENSSTOG00000001267) #33 SLTM (ENSSTOG00000000584) #34 ENSSTOG00000030471 MINDY2 (ENSSTOG00000000569) #36 ADAM10 (ENSSTOG00000000561) #37 LIPC (ENSSTOG00000000547) AQP9 (ENSSTOG00000014131) ALDH1A2 (ENSSTOG00000000292) Alpin marmot MODERN SPECIES 7 ENSMMMG00000009191 USP3 (ENSMMMG00000009199) CA12 (ENSMMMG00000009446) APH1B (ENSMMMG00000009477) #10 RAB8B (ENSMMMG00000009506) #11 RPS27L (ENSMMMG00000009532) #12 TPM1 (ENSMMMG00000009577) #14 TLN2 (ENSMMMG00000010746) #16 ENSMMMG00000011016 ENSMMMG00000011024 #18 ENSMMMG00000011035 #18 VPS13C (ENSMMMG00000011042) #19 RORA (ENSMMMG00000011194) #20 ENSMMMG00000011212 #21 ENSMMMG00000011237 #21 ENSMMMG00000011269 ##22 FOXB1 (ENSMMMG00000011291) #23 BNIP2 (ENSMMMG00000011312) #24 GTF2A2 (ENSMMMG00000011388) #25 GCNT3 (ENSMMMG00000011425) #26 FAM81A (ENSMMMG00000011428) #28 ENSMMMG00000011444 MYO1E (ENSMMMG00000011477) #30 CCNB2 (ENSMMMG00000011506) #32 RNF111 (ENSMMMG00000011515) #33 SLTM (ENSMMMG00000011563) #34 MINDY2 (ENSMMMG00000014393) #36 ENSMMMG00000014410 ADAM10 (ENSMMMG00000014417) #37 LIPC (ENSMMMG00000014432) AQP9 (ENSMMMG00000014447) Eurasian red squirrel MODERN SPECIES 11 HERC1 (ENSSVLG00005019826) FBXL22 (ENSSVLG00005019656) USP3 (ENSSVLG00005019582) CA12 (ENSSVLG00005019375) APH1B (ENSSVLG00005019139) #10 RAB8B (ENSSVLG00005019069) #11 ENSSVLG00005018915 #12 LACTB (ENSSVLG00005018852) #13 TPM1 (ENSSVLG00005018158) #14 TLN2 (ENSSVLG00005017833) #16 ENSSVLG00005017744 #18 ENSSVLG00005017686 #18 VPS13C (ENSSVLG00005014425) #19 RORA (ENSSVLG00005013514) #20 ICE2 (ENSSVLG00005013300) #21 ENSSVLG00005013204 ##22 FOXB1 (ENSSVLG00005013050) #23 BNIP2 (ENSSVLG00005012971) #24 GTF2A2 (ENSSVLG00005012828) #25 GCNT3 (ENSSVLG00005012791) #26 ENSSVLG00005012768 FAM81A (ENSSVLG00005012717) #28 MYO1E (ENSSVLG00005012637) #30 ENSSVLG00005012381 #32 RNF111 (ENSSVLG00005012286) #33 SLTM (ENSSVLG00005012027) #34 ENSSVLG00005011970 MINDY2 (ENSSVLG00005011765) #36 ENSSVLG00005011609 #37 LIPC (ENSSVLG00005011202) AQP9 (ENSSVLG00005011049) Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Eulipotyphla ANCESTRAL SPECIES 571 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 Common shrew MODERN SPECIES 5850 ENSSARG00000007560 #20 ICE2 (ENSSARG00000007530) #21 ANXA2 (ENSSARG00000007505) ##22 Hedgehog MODERN SPECIES 7466 ANXA2 (ENSEEUG00000005832) ##22 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00930000152855 ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Pecora ANCESTRAL SPECIES 6 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Yarkand deer MODERN SPECIES 3 CA12 (ENSCHYG00000006765) ENSCHYG00000006915 APH1B (ENSCHYG00000006935) #10 RAB8B (ENSCHYG00000006985) #11 ENSCHYG00000007049 ENSCHYG00000007078 LACTB (ENSCHYG00000007150) #13 TPM1 (ENSCHYG00000007247) #14 TLN2 (ENSCHYG00000007530) #16 ENSCHYG00000007706 ENSCHYG00000007733 ENSCHYG00000007764 VPS13C (ENSCHYG00000008027) #19 RORA (ENSCHYG00000012326) #20 ICE2 (ENSCHYG00000012586) #21 ANXA2 (ENSCHYG00000012695) ##22 FOXB1 (ENSCHYG00000012800) #23 BNIP2 (ENSCHYG00000012834) #24 GTF2A2 (ENSCHYG00000013080) #25 GCNT3 (ENSCHYG00000013172) #26 FAM81A (ENSCHYG00000013193) #28 MYO1E (ENSCHYG00000013289) #30 ENSCHYG00000013470 #32 RNF111 (ENSCHYG00000013657) #33 SLTM (ENSCHYG00000013792) #34 MINDY2 (ENSCHYG00000013931) #36 ADAM10 (ENSCHYG00000014132) #37 LIPC (ENSCHYG00000014377) AQP9 (ENSCHYG00000014576) ENSCHYG00000014708 ALDH1A2 (ENSCHYG00000014768) Percora_a ANCESTRAL SPECIES 8 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Bovidae ANCESTRAL SPECIES 7 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00390000012916.y.a.b ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Caprinae ANCESTRAL SPECIES 11 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00390000012916.y.a.b ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Goat DUPLICATION Goat MODERN SPECIES 1 CA12 (ENSCHIG00000004709) APH1B (ENSCHIG00000019602) #10 ENSCHIG00000016246 RAB8B (ENSCHIG00000019412) #11 RPS27L (ENSCHIG00000012945) #12 LACTB (ENSCHIG00000027114) #13 ENSCHIG00000018051 TPM1 (ENSCHIG00000020204) #14 TLN2 (ENSCHIG00000021342) #16 ENSCHIG00000024274 ENSCHIG00000009551 ENSCHIG00000026417 VPS13C (ENSCHIG00000021131) #19 RORA (ENSCHIG00000025775) #20 ICE2 (ENSCHIG00000025114) #21 ENSCHIG00000006134 ##22 ENSCHIG00000017509 FOXB1 (ENSCHIG00000008336) #23 BNIP2 (ENSCHIG00000025922) #24 ENSCHIG00000004630 GTF2A2 (ENSCHIG00000015247) #25 GCNT3 (ENSCHIG00000009946) #26 FAM81A (ENSCHIG00000015814) #28 MYO1E (ENSCHIG00000013110) #30 CCNB2 (ENSCHIG00000014721) #32 RNF111 (ENSCHIG00000023723) #33 SLTM (ENSCHIG00000008780) #34 MINDY2 (ENSCHIG00000008343) #36 ENSCHIG00000004124 ADAM10 (ENSCHIG00000007232) #37 LIPC (ENSCHIG00000026829) Goat MODERN SPECIES 14 UBP1 (ENSCHIG00000021781) FBXL2 (ENSCHIG00000013784) SUSD5 (ENSCHIG00000008055) CRTAP (ENSCHIG00000020384) GLB1 (ENSCHIG00000014228) CCR4 (ENSCHIG00000020041) TRIM71 (ENSCHIG00000018441) CNOT10 (ENSCHIG00000008987) DYNC1LI1 (ENSCHIG00000024586) CMTM6 (ENSCHIG00000010775) CMTM7 (ENSCHIG00000022116) CMTM8 (ENSCHIG00000015869) ENSCHIG00000011554 OSBPL10 (ENSCHIG00000017764) STT3B (ENSCHIG00000013391) ENSCHIG00000020290 ##22 GADL1 (ENSCHIG00000015633) TGFBR2 (ENSCHIG00000011473) RBMS3 (ENSCHIG00000009144) ENSCHIG00000022736 AZI2 (ENSCHIG00000017018) CMC1 (ENSCHIG00000009271) EOMES (ENSCHIG00000024745) SLC4A7 (ENSCHIG00000015677) NEK10 (ENSCHIG00000003691) SEC61G (ENSCHIG00000015002) EGFR (ENSCHIG00000020547) LANCL2 (ENSCHIG00000016442) VOPP1 (ENSCHIG00000012490) PGAM2 (ENSCHIG00000005138) DBNL (ENSCHIG00000015882) Goat MODERN SPECIES 30 ENSCHIG00000018935 ZIC3 (ENSCHIG00000021756) ENSCHIG00000007648 ENSCHIG00000009593 ENSCHIG00000000060 ENSCHIG00000000095 ARHGEF6 (ENSCHIG00000000132) CD40LG (ENSCHIG00000000168) ENSCHIG00000018808 ENSCHIG00000000243 BRS3 (ENSCHIG00000000280) HTATSF1 (ENSCHIG00000000312) ENSCHIG00000000348 ENSCHIG00000000379 MOSPD1 (ENSCHIG00000000414) ENSCHIG00000000449 ##22 PABIR2 (ENSCHIG00000009443) PLAC1 (ENSCHIG00000019311) PHF6 (ENSCHIG00000012946) HPRT1 (ENSCHIG00000015745) GPC3 (ENSCHIG00000018483) GPC4 (ENSCHIG00000020871) ENSCHIG00000008922 ENSCHIG00000020224 MBNL3 (ENSCHIG00000015570) ENSCHIG00000018598 RAP2C (ENSCHIG00000021486) FRMD7 (ENSCHIG00000025596) ENSCHIG00000011659 STK26 (ENSCHIG00000016017) ENSCHIG00000020678 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 23 ENSOARG00020007473 DAPK2 (ENSOARG00020007501) HERC1 (ENSOARG00020007683) FBXL22 (ENSOARG00020007949) USP3 (ENSOARG00020008050) APH1B (ENSOARG00020008742) #10 RAB8B (ENSOARG00020008761) #11 RPS27L (ENSOARG00020008837) #12 LACTB (ENSOARG00020008870) #13 TPM1 (ENSOARG00020009011) #14 TLN2 (ENSOARG00020009618) #16 ENSOARG00020010758 VPS13C (ENSOARG00020011169) #19 RORA (ENSOARG00020019090) #20 ICE2 (ENSOARG00020019537) #21 ANXA2 (ENSOARG00020019713) ##22 FOXB1 (ENSOARG00020019859) #23 BNIP2 (ENSOARG00020019895) #24 GTF2A2 (ENSOARG00020019984) #25 GCNT3 (ENSOARG00020020115) #26 FAM81A (ENSOARG00020020134) #28 MYO1E (ENSOARG00020020182) #30 CCNB2 (ENSOARG00020020879) #32 RNF111 (ENSOARG00020021012) #33 SLTM (ENSOARG00020021163) #34 MINDY2 (ENSOARG00020021211) #36 ADAM10 (ENSOARG00020021312) #37 LIPC (ENSOARG00020021564) ENSOARG00020021759 AQP9 (ENSOARG00020021823) ALDH1A2 (ENSOARG00020021892) Rambouillet Sheep MODERN SPECIES 10 FBXL2 (ENSOARG00020024907) CRTAP (ENSOARG00020024874) ENSOARG00020024863 CCR4 (ENSOARG00020024855) ENSOARG00020024808 TRIM71 (ENSOARG00020024789) CNOT10 (ENSOARG00020024662) DYNC1LI1 (ENSOARG00020024520) CMTM6 (ENSOARG00020024489) ENSOARG00020024478 CMTM7 (ENSOARG00020024446) ENSOARG00020024424 GPD1L (ENSOARG00020024414) STT3B (ENSOARG00020024362) OSBPL10 (ENSOARG00020024245) ENSOARG00020024192 ##22 GADL1 (ENSOARG00020024116) TGFBR2 (ENSOARG00020024064) RBMS3 (ENSOARG00020023909) AZI2 (ENSOARG00020023862) CMC1 (ENSOARG00020023823) EOMES (ENSOARG00020023776) SLC4A7 (ENSOARG00020018025) NEK10 (ENSOARG00020017393) ENSOARG00020017329 ENSOARG00020017266 EGFR (ENSOARG00020016388) LANCL2 (ENSOARG00020016230) VOPP1 (ENSOARG00020015646) PGAM2 (ENSOARG00020015624) DBNL (ENSOARG00020015082) Bovinae ANCESTRAL SPECIES 11 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062.e #13 ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00390000015813.g.d ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Bos ANCESTRAL SPECIES 13 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a.w #12 ENSGT00390000001062.e #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00390000012916.y.a.b ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00390000015813.g.d ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Bos_b ANCESTRAL SPECIES 11 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a.v #12 ENSGT00390000001062.e #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00390000012916.y.a.b ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00390000015813.g.d ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Cow DUPLICATION Cow MODERN SPECIES 1 FBXL22 (ENSBTAG00000008807) USP3 (ENSBTAG00000008805) CA12 (ENSBTAG00000019390) APH1B (ENSBTAG00000010641) #10 RAB8B (ENSBTAG00000011146) #11 RPS27L (ENSBTAG00000012898) #12 LACTB (ENSBTAG00000017373) #13 TPM1 (ENSBTAG00000005373) #14 ENSBTAG00000040590 TLN2 (ENSBTAG00000003667) #16 C2CD4B (ENSBTAG00000020814) ENSBTAG00000010952 VPS13C (ENSBTAG00000038920) #19 RORA (ENSBTAG00000015904) #20 ICE2 (ENSBTAG00000005328) #21 ANXA2 (ENSBTAG00000009615) ##22 FOXB1 (ENSBTAG00000019114) #23 BNIP2 (ENSBTAG00000013493) #24 GTF2A2 (ENSBTAG00000010298) #25 GCNT3 (ENSBTAG00000009443) #26 FAM81A (ENSBTAG00000014699) #28 MYO1E (ENSBTAG00000021538) #30 CCNB2 (ENSBTAG00000005269) #32 RNF111 (ENSBTAG00000014181) #33 SLTM (ENSBTAG00000011319) #34 MINDY2 (ENSBTAG00000012391) #36 ENSBTAG00000049189 ADAM10 (ENSBTAG00000005481) #37 LIPC (ENSBTAG00000005479) ENSBTAG00000049039 AQP9 (ENSBTAG00000013452) Cow MODERN SPECIES 177 ENSBTAG00000052733 ENSBTAG00000045569 ENSBTAG00000049183 ZNF75D (ENSBTAG00000047939) ENSBTAG00000050385 ZNF449 (ENSBTAG00000018090) ENSBTAG00000048653 ZNF75D (ENSBTAG00000047954) ENSBTAG00000019546 ENSBTAG00000049298 ENSBTAG00000052285 ENSBTAG00000039890 ENSBTAG00000054025 SMIM10 (ENSBTAG00000048173) MOSPD1 (ENSBTAG00000013922) ENSBTAG00000050804 ##22 PABIR2 (ENSBTAG00000001886) PLAC1 (ENSBTAG00000006293) HPRT1 (ENSBTAG00000014685) PHF6 (ENSBTAG00000015196) CCDC160 (ENSBTAG00000036349) ENSBTAG00000030507 GPC3 (ENSBTAG00000020406) GPC4 (ENSBTAG00000020644) ENSBTAG00000026063 USP26 (ENSBTAG00000021344) HS6ST2 (ENSBTAG00000049807) MBNL3 (ENSBTAG00000014088) RAP2C (ENSBTAG00000004131) FRMD7 (ENSBTAG00000007344) STK26 (ENSBTAG00000019652) Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 14 SUSD5 (ENSBIXG00005007654) ENSBIXG00005018483 ENSBIXG00005018448 GLB1 (ENSBIXG00005018417) CCR4 (ENSBIXG00005002980) TRIM71 (ENSBIXG00005018379) CNOT10 (ENSBIXG00005018346) ENSBIXG00005018213 DYNC1LI1 (ENSBIXG00005018184) CMTM6 (ENSBIXG00005018160) ENSBIXG00005018124 ENSBIXG00005018096 OSBPL10 (ENSBIXG00005018070) STT3B (ENSBIXG00005018011) ENSBIXG00005007719 ENSBIXG00005017966 ##22 GADL1 (ENSBIXG00005002915) TGFBR2 (ENSBIXG00005017882) RBMS3 (ENSBIXG00005017781) ENSBIXG00005017521 ENSBIXG00005017492 ZCWPW2 (ENSBIXG00005017435) AZI2 (ENSBIXG00005017418) CMC1 (ENSBIXG00005017377) EOMES (ENSBIXG00005017331) SLC4A7 (ENSBIXG00005017256) NEK10 (ENSBIXG00005002722) SEC61G (ENSBIXG00005016774) EGFR (ENSBIXG00005016700) ENSBIXG00005016602 Hybrid Bos Indicus MODERN SPECIES 1 CA12 (ENSBIXG00005003586) APH1B (ENSBIXG00005021158) #10 RAB8B (ENSBIXG00005021126) #11 RPS27L (ENSBIXG00005021094) #12 ENSBIXG00005021042 #13 ENSBIXG00005021018 TPM1 (ENSBIXG00005020956) #14 ENSBIXG00005020564 TLN2 (ENSBIXG00005020508) #16 ENSBIXG00005003454 ENSBIXG00005020414 VPS13C (ENSBIXG00005020334) #19 RORA (ENSBIXG00005020235) #20 ICE2 (ENSBIXG00005020165) #21 ENSBIXG00005020130 ANXA2 (ENSBIXG00005020120) ##22 FOXB1 (ENSBIXG00005003289) #23 BNIP2 (ENSBIXG00005020028) #24 GTF2A2 (ENSBIXG00005003264) #25 GCNT3 (ENSBIXG00005019900) #26 ENSBIXG00005019886 FAM81A (ENSBIXG00005005864) #28 MYO1E (ENSBIXG00005019811) #30 CCNB2 (ENSBIXG00005019754) #32 RNF111 (ENSBIXG00005019694) #33 SLTM (ENSBIXG00005003196) #34 MINDY2 (ENSBIXG00005019539) #36 ENSBIXG00005019503 ADAM10 (ENSBIXG00005019471) #37 LIPC (ENSBIXG00005003152) AQP9 (ENSBIXG00005019291) Bos_a ANCESTRAL SPECIES 53 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a.w #12 ENSGT00390000001062.e #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00390000012916.y.a.b ENSGT00940000154699 #16 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405.hb #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00390000015813.g.d ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Domestic yak MODERN SPECIES 2 ENSBGRG00000003772 #12 LACTB (ENSBGRG00000003854) #13 ENSBGRG00000003930 ENSBGRG00000003954 ENSBGRG00000003979 #14 ENSBGRG00000004293 TLN2 (ENSBGRG00000004335) #16 ENSBGRG00000004627 ENSBGRG00000004649 VPS13C (ENSBGRG00000004877) #19 ENSBGRG00000007967 RORA (ENSBGRG00000007990) #20 ENSBGRG00000008135 ENSBGRG00000008149 ICE2 (ENSBGRG00000008178) #21 ANXA2 (ENSBGRG00000008299) ##22 FOXB1 (ENSBGRG00000008353) #23 BNIP2 (ENSBGRG00000008392) #24 ENSBGRG00000008564 #25 GCNT3 (ENSBGRG00000008683) #26 ENSBGRG00000008693 FAM81A (ENSBGRG00000008720) #28 MYO1E (ENSBGRG00000008828) #30 ENSBGRG00000009430 ENSBGRG00000009460 #32 RNF111 (ENSBGRG00000009659) #33 ENSBGRG00000009750 ENSBGRG00000009765 ENSBGRG00000009782 ##14 SLTM (ENSBGRG00000009817) #34 MINDY2 (ENSBGRG00000010110) #36 Wild yak DUPLICATION Wild yak MODERN SPECIES 1574 VPS13C (ENSBMUG00000011699) #19 RORA (ENSBMUG00000012288) #20 ICE2 (ENSBMUG00000012340) #21 ENSBMUG00000012365 ##22 FOXB1 (ENSBMUG00000012372) #23 BNIP2 (ENSBMUG00000012398) #24 GTF2A2 (ENSBMUG00000012433) #25 GCNT3 (ENSBMUG00000012454) #26 FAM81A (ENSBMUG00000012462) #28 Wild yak MODERN SPECIES 2938 ENSBMUG00000008425 SMIM10 (ENSBMUG00000008418) MOSPD1 (ENSBMUG00000008405) ENSBMUG00000008383 ##22 PABIR2 (ENSBMUG00000008319) ENSBMUG00000008249 PLAC1 (ENSBMUG00000008238) ENSBMUG00000008205 PHF6 (ENSBMUG00000008179) American bison DUPLICATION American bison MODERN SPECIES 3069 TLN2 (ENSBBBG00000007650) #16 VPS13C (ENSBBBG00000002901) #19 RORA (ENSBBBG00000013770) #20 ICE2 (ENSBBBG00000013793) #21 ENSBBBG00000008447 ##22 FOXB1 (ENSBBBG00000002959) #23 ENSBBBG00000013838 NR3C2 (ENSBBBG00000002997) IQCM (ENSBBBG00000003010) DCLK2 (ENSBBBG00000003070) MAB21L2 (ENSBBBG00000002892) LRBA (ENSBBBG00000003153) RPS3A (ENSBBBG00000003169) ENSBBBG00000003199 SH3D19 (ENSBBBG00000003232) FHIP1A (ENSBBBG00000014291) GATB (ENSBBBG00000014330) FBXW7 (ENSBBBG00000003325) TMEM154 (ENSBBBG00000014446) TIGD4 (ENSBBBG00000014451) American bison MODERN SPECIES 2981 ENSBBBG00000004605 ENSBBBG00000007097 GLB1 (ENSBBBG00000018565) CCR4 (ENSBBBG00000004569) TRIM71 (ENSBBBG00000018536) CNOT10 (ENSBBBG00000018519) ENSBBBG00000018446 DYNC1LI1 (ENSBBBG00000018433) CMTM6 (ENSBBBG00000004498) CMTM7 (ENSBBBG00000018392) CMTM8 (ENSBBBG00000018364) ENSBBBG00000018344 OSBPL10 (ENSBBBG00000007583) ENSBBBG00000018279 STT3B (ENSBBBG00000018253) ENSBBBG00000018206 ##22 GADL1 (ENSBBBG00000018198) TGFBR2 (ENSBBBG00000018112) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 257 TPM1 (ENSMMSG00000014336) #14 ENSMMSG00000015690 ENSMMSG00000015700 TLN2 (ENSMMSG00000015724) #16 ENSMMSG00000015783 ENSMMSG00000015792 ENSMMSG00000015799 ENSMMSG00000015806 ENSMMSG00000015819 VPS13C (ENSMMSG00000016146) #19 RORA (ENSMMSG00000018934) #20 ICE2 (ENSMMSG00000019040) #21 ENSMMSG00000019123 ##22 FOXB1 (ENSMMSG00000019181) #23 ENSMMSG00000019194 ENSMMSG00000019221 BNIP2 (ENSMMSG00000019237) #24 GTF2A2 (ENSMMSG00000019278) #25 GCNT3 (ENSMMSG00000019356) #26 FAM81A (ENSMMSG00000019367) #28 MYO1E (ENSMMSG00000019415) #30 ENSMMSG00000019472 ENSMMSG00000019489 #32 RNF111 (ENSMMSG00000019565) #33 ENSMMSG00000019602 SLTM (ENSMMSG00000019627) #34 MINDY2 (ENSMMSG00000019661) #36 ENSMMSG00000019695 Siberian musk deer MODERN SPECIES 57 ENSMMSG00000008937 AFG1L (ENSMMSG00000008965) ENSMMSG00000009017 ##22 SNX3 (ENSMMSG00000009040) NR2E1 (ENSMMSG00000009124) ENSMMSG00000009182 OSTM1 (ENSMMSG00000009222) SEC63 (ENSMMSG00000009260) SCML4 (ENSMMSG00000009358) SOBP (ENSMMSG00000009483) PDSS2 (ENSMMSG00000009520) ENSMMSG00000009562 BEND3 (ENSMMSG00000009582) MTRES1 (ENSMMSG00000009604) CD24 (ENSMMSG00000009656) ENSMMSG00000009682 QRSL1 (ENSMMSG00000009700) RTN4IP1 (ENSMMSG00000009752) Cetacea ANCESTRAL SPECIES 2 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.fb #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Blue whale DUPLICATION Blue whale MODERN SPECIES 19 PICALM (ENSBMSG00010001786) EED (ENSBMSG00010001736) HIKESHI (ENSBMSG00010001721) CCDC81 (ENSBMSG00010001642) ME3 (ENSBMSG00010001610) PRSS23 (ENSBMSG00010001597) FZD4 (ENSBMSG00010001591) ENSBMSG00010001482 RAB38 (ENSBMSG00010001436) CTSC (ENSBMSG00010001420) GRM5 (ENSBMSG00010001371) TYR (ENSBMSG00010001331) NOX4 (ENSBMSG00010000676) FOLH1 (ENSBMSG00010000460) ENSBMSG00010000378 ENSBMSG00010000367 ##22 ENSBMSG00010000341 ENSBMSG00010000316 ENSBMSG00010000282 TRIM77 (ENSBMSG00010008740) NAALAD2 (ENSBMSG00010008680) CHORDC1 (ENSBMSG00010008638) ENSBMSG00010008616 ENSBMSG00010008607 FAT3 (ENSBMSG00010008516) MTNR1B (ENSBMSG00010008461) SLC36A4 (ENSBMSG00010008445) DEUP1 (ENSBMSG00010008417) SMCO4 (ENSBMSG00010008401) ENSBMSG00010008389 CEP295 (ENSBMSG00010008344) Blue whale MODERN SPECIES 11 MPHOSPH10 (ENSBMSG00010007566) FAN1 (ENSBMSG00010007593) MTMR10 (ENSBMSG00010007611) TRPM1 (ENSBMSG00010007636) ENSBMSG00010007665 MORF4L1 (ENSBMSG00010007681) CTSH (ENSBMSG00010007698) RASGRF1 (ENSBMSG00010007726) ANKRD34C (ENSBMSG00010007785) TMED3 (ENSBMSG00010007796) MINAR1 (ENSBMSG00010007815) MTHFS (ENSBMSG00010007825) BCL2A1 (ENSBMSG00010007836) ZFAND6 (ENSBMSG00010007853) FAH (ENSBMSG00010007879) ENSBMSG00010007887 ##22 CTXND1 (ENSBMSG00010007894) ENSBMSG00010007902 ABHD17C (ENSBMSG00010000061) CEMIP (ENSBMSG00010000094) MESD (ENSBMSG00010000141) TLNRD1 (ENSBMSG00010000171) CFAP161 (ENSBMSG00010000200) IL16 (ENSBMSG00010000273) STARD5 (ENSBMSG00010000342) TMC3 (ENSBMSG00010000395) ENSBMSG00010000452 MEX3B (ENSBMSG00010000471) ENSBMSG00010000493 ENSBMSG00010000515 ENSBMSG00010000527 Blue whale MODERN SPECIES 4 ENSBMSG00010008822 SPAST (ENSBMSG00010008704) SLC30A6 (ENSBMSG00010008651) NLRC4 (ENSBMSG00010019931) YIPF4 (ENSBMSG00010019902) TTC27 (ENSBMSG00010017147) LTBP1 (ENSBMSG00010016474) RASGRP3 (ENSBMSG00010016268) FAM98A (ENSBMSG00010016197) ENSBMSG00010016172 ENSBMSG00010016153 ENSBMSG00010016143 CRIM1 (ENSBMSG00010016115) FEZ2 (ENSBMSG00010015962) VIT (ENSBMSG00010015804) ENSBMSG00010015763 ##22 STRN (ENSBMSG00010015553) HEATR5B (ENSBMSG00010015346) GPATCH11 (ENSBMSG00010015287) EIF2AK2 (ENSBMSG00010015229) ENSBMSG00010015207 CEBPZ (ENSBMSG00010015184) NDUFAF7 (ENSBMSG00010015087) PRKD3 (ENSBMSG00010015056) QPCT (ENSBMSG00010015034) ENSBMSG00010015018 ENSBMSG00010014674 CYP1B1 (ENSBMSG00010014614) ATL2 (ENSBMSG00010014448) ENSBMSG00010014392 HNRNPLL (ENSBMSG00010013944) Blue whale DUPLICATION Blue whale MODERN SPECIES 17 CCDC171 (ENSBMSG00010001177) ENSBMSG00010001228 ENSBMSG00010001274 SNAPC3 (ENSBMSG00010001390) TTC39B (ENSBMSG00010001423) FREM1 (ENSBMSG00010001498) CER1 (ENSBMSG00010001538) ZDHHC21 (ENSBMSG00010001550) NFIB (ENSBMSG00010001691) MPDZ (ENSBMSG00010002836) LURAP1L (ENSBMSG00010002885) TYRP1 (ENSBMSG00010002890) ENSBMSG00010002910 ENSBMSG00010002917 PTPRD (ENSBMSG00010003108) ENSBMSG00010003625 ##22 DMAC1 (ENSBMSG00010003630) KDM4C (ENSBMSG00010003640) ENSBMSG00010003657 ENSBMSG00010003666 ENSBMSG00010003689 UHRF2 (ENSBMSG00010003727) ENSBMSG00010003737 ENSBMSG00010003740 ENSBMSG00010003744 IL33 (ENSBMSG00010003753) ENSBMSG00010003773 ENSBMSG00010003784 KIAA2026 (ENSBMSG00010003802) MLANA (ENSBMSG00010003817) ERMP1 (ENSBMSG00010003832) Blue whale MODERN SPECIES 11 USP3 (ENSBMSG00010000419) ENSBMSG00010000553 CA12 (ENSBMSG00010000588) APH1B (ENSBMSG00010000650) #10 RAB8B (ENSBMSG00010000668) #11 RPS27L (ENSBMSG00010000683) #12 LACTB (ENSBMSG00010000701) #13 TPM1 (ENSBMSG00010000776) #14 TLN2 (ENSBMSG00010001027) #16 ENSBMSG00010001086 ENSBMSG00010001099 VPS13C (ENSBMSG00010001188) #19 ENSBMSG00010001281 RORA (ENSBMSG00010001304) #20 ICE2 (ENSBMSG00010001345) #21 ENSBMSG00010001360 ##22 FOXB1 (ENSBMSG00010001373) #23 BNIP2 (ENSBMSG00010001392) #24 ENSBMSG00010001413 #25 FAM81A (ENSBMSG00010001446) #28 MYO1E (ENSBMSG00010001489) #30 CCNB2 (ENSBMSG00010001737) #32 RNF111 (ENSBMSG00010001868) #33 SLTM (ENSBMSG00010001996) #34 MINDY2 (ENSBMSG00010002021) #36 ADAM10 (ENSBMSG00010002053) #37 LIPC (ENSBMSG00010002097) AQP9 (ENSBMSG00010002216) ALDH1A2 (ENSBMSG00010002264) ENSBMSG00010002414 MYZAP (ENSBMSG00010002466) Odontoceti ANCESTRAL SPECIES 2 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.fb #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.fb #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Dolphin MODERN SPECIES 2261 RORA (ENSTTRG00000007718) #20 ICE2 (ENSTTRG00000007715) #21 ANXA2 (ENSTTRG00000007705) ##22 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000159282 ENSGT00390000002049.c.b.n #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00390000015537.v.a.b.b ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000154576.s.b ENSGT00940000158531 #24 ENSGT00390000014572.fb #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00500000044920.h ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Vaquita DUPLICATION Vaquita MODERN SPECIES 4 SPAST (ENSPSNG00000009453) SLC30A6 (ENSPSNG00000009965) NLRC4 (ENSPSNG00000010270) YIPF4 (ENSPSNG00000010425) BIRC6 (ENSPSNG00000010538) TTC27 (ENSPSNG00000011309) ENSPSNG00000011375 LTBP1 (ENSPSNG00000011444) RASGRP3 (ENSPSNG00000011512) FAM98A (ENSPSNG00000011836) ENSPSNG00000011915 CRIM1 (ENSPSNG00000011956) FEZ2 (ENSPSNG00000012023) VIT (ENSPSNG00000012296) STRN (ENSPSNG00000013377) ENSPSNG00000013636 ##22 HEATR5B (ENSPSNG00000013725) GPATCH11 (ENSPSNG00000013915) EIF2AK2 (ENSPSNG00000014066) ENSPSNG00000014144 CEBPZ (ENSPSNG00000014215) NDUFAF7 (ENSPSNG00000014303) PRKD3 (ENSPSNG00000014466) QPCT (ENSPSNG00000014580) ENSPSNG00000014638 ENSPSNG00000014732 CYP1B1 (ENSPSNG00000015177) ENSPSNG00000015287 HNRNPLL (ENSPSNG00000015589) GALM (ENSPSNG00000016020) ENSPSNG00000004341 Vaquita MODERN SPECIES 11 ENSPSNG00000000353 CA12 (ENSPSNG00000000410) APH1B (ENSPSNG00000000505) #10 RAB8B (ENSPSNG00000000524) #11 ENSPSNG00000000555 #12 LACTB (ENSPSNG00000000570) #13 TPM1 (ENSPSNG00000000684) #14 TLN2 (ENSPSNG00000000901) #16 ENSPSNG00000000941 ENSPSNG00000000958 VPS13C (ENSPSNG00000001057) #19 ENSPSNG00000001268 RORA (ENSPSNG00000001296) #20 ENSPSNG00000001324 ICE2 (ENSPSNG00000001344) #21 ANXA2 (ENSPSNG00000001393) ##22 FOXB1 (ENSPSNG00000001422) #23 ENSPSNG00000001436 BNIP2 (ENSPSNG00000001478) #24 ENSPSNG00000001542 #25 GCNT3 (ENSPSNG00000001564) #26 FAM81A (ENSPSNG00000001585) #28 MYO1E (ENSPSNG00000001661) #30 CCNB2 (ENSPSNG00000001729) #32 ENSPSNG00000001751 RNF111 (ENSPSNG00000001766) #33 SLTM (ENSPSNG00000001794) #34 MINDY2 (ENSPSNG00000001818) #36 ADAM10 (ENSPSNG00000001884) #37 LIPC (ENSPSNG00000001932) AQP9 (ENSPSNG00000001984) Monodontidae ANCESTRAL SPECIES 27 ENSGT00940000159282 ENSGT00390000002049.c.b.n #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00390000015537.v.a.b.b ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000154576.s.b ENSGT00940000158531 #24 ENSGT00390000014572.fb #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00500000044920.h ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 52 MTMR10 (ENSDLEG00000020447) TRPM1 (ENSDLEG00000020467) KLF13 (ENSDLEG00000020647) ENSDLEG00000020649 MORF4L1 (ENSDLEG00000020654) ENSDLEG00000020674 CTSH (ENSDLEG00000020683) RASGRF1 (ENSDLEG00000020700) ANKRD34C (ENSDLEG00000006807) TMED3 (ENSDLEG00000006810) MINAR1 (ENSDLEG00000006816) BCL2A1 (ENSDLEG00000006834) ENSDLEG00000006855 ZFAND6 (ENSDLEG00000006860) FAH (ENSDLEG00000006867) ENSDLEG00000006880 ##22 ENSDLEG00000006886 ARNT2 (ENSDLEG00000006890) ABHD17C (ENSDLEG00000006910) CEMIP (ENSDLEG00000006917) MESD (ENSDLEG00000006934) TLNRD1 (ENSDLEG00000006937) CFAP161 (ENSDLEG00000006940) IL16 (ENSDLEG00000006947) STARD5 (ENSDLEG00000006976) TMC3 (ENSDLEG00000006989) ENSDLEG00000007017 ENSDLEG00000007024 MEX3B (ENSDLEG00000007028) EFL1 (ENSDLEG00000007032) ENSDLEG00000007040 Beluga whale MODERN SPECIES 37 MEMO1 (ENSDLEG00000015222) DPY30 (ENSDLEG00000015204) ENSDLEG00000015189 SPAST (ENSDLEG00000015060) NLRC4 (ENSDLEG00000015020) YIPF4 (ENSDLEG00000015003) ENSDLEG00000014992 BIRC6 (ENSDLEG00000014426) TTC27 (ENSDLEG00000014256) LTBP1 (ENSDLEG00000014027) RASGRP3 (ENSDLEG00000013957) FAM98A (ENSDLEG00000013934) CRIM1 (ENSDLEG00000013695) FEZ2 (ENSDLEG00000013642) VIT (ENSDLEG00000013573) ENSDLEG00000013565 ##22 STRN (ENSDLEG00000013518) HEATR5B (ENSDLEG00000013441) GPATCH11 (ENSDLEG00000013417) EIF2AK2 (ENSDLEG00000013398) ENSDLEG00000013387 CEBPZ (ENSDLEG00000013360) NDUFAF7 (ENSDLEG00000013335) PRKD3 (ENSDLEG00000013299) QPCT (ENSDLEG00000013267) CDC42EP3 (ENSDLEG00000013254) ENSDLEG00000013246 RMDN2 (ENSDLEG00000013236) CYP1B1 (ENSDLEG00000013228) ENSDLEG00000013220 ENSDLEG00000013215 Beluga whale MODERN SPECIES 20 ENSDLEG00000006289 #12 LACTB (ENSDLEG00000006271) #13 ENSDLEG00000006267 #14 ENSDLEG00000006265 #14 ENSDLEG00000006262 ##14 TLN2 (ENSDLEG00000002192) #16 ENSDLEG00000001077 #17 ENSDLEG00000001065 ENSDLEG00000001038 VPS13C (ENSDLEG00000000606) #19 ENSDLEG00000000383 ENSDLEG00000000365 RORA (ENSDLEG00000000324) #20 ICE2 (ENSDLEG00000000261) #21 ENSDLEG00000012242 ANXA2 (ENSDLEG00000012217) ##22 FOXB1 (ENSDLEG00000012206) #23 ENSDLEG00000012193 BNIP2 (ENSDLEG00000012134) #24 GTF2A2 (ENSDLEG00000012117) #25 GCNT3 (ENSDLEG00000012113) #26 ENSDLEG00000012103 FAM81A (ENSDLEG00000012090) #28 MYO1E (ENSDLEG00000011982) #30 CCNB2 (ENSDLEG00000011945) #32 ENSDLEG00000011930 RNF111 (ENSDLEG00000011891) #33 SLTM (ENSDLEG00000011855) #34 ENSDLEG00000011841 MINDY2 (ENSDLEG00000011823) #36 ADAM10 (ENSDLEG00000011799) #37 Narwhal DUPLICATION Narwhal MODERN SPECIES 308 TRPM1 (ENSMMNG00015020195) KLF13 (ENSMMNG00015020554) ENSMMNG00015020568 MORF4L1 (ENSMMNG00015020596) ENSMMNG00015020628 CTSH (ENSMMNG00015020640) RASGRF1 (ENSMMNG00015020726) ANKRD34C (ENSMMNG00015020810) TMED3 (ENSMMNG00015020834) MINAR1 (ENSMMNG00015020856) ENSMMNG00015020862 MTHFS (ENSMMNG00015020873) BCL2A1 (ENSMMNG00015020882) ZFAND6 (ENSMMNG00015020898) ENSMMNG00015020924 ENSMMNG00015020959 ##22 CTXND1 (ENSMMNG00015020971) ENSMMNG00015020982 ARNT2 (ENSMMNG00015021003) ABHD17C (ENSMMNG00015021050) CEMIP (ENSMMNG00015021076) MESD (ENSMMNG00015005686) TLNRD1 (ENSMMNG00015005697) CFAP161 (ENSMMNG00015005744) IL16 (ENSMMNG00015005793) STARD5 (ENSMMNG00015005838) TMC3 (ENSMMNG00015005866) ENSMMNG00015005896 ENSMMNG00015005907 MEX3B (ENSMMNG00015005916) EFL1 (ENSMMNG00015005945) Narwhal MODERN SPECIES 305 SPAST (ENSMMNG00015016548) SLC30A6 (ENSMMNG00015016413) NLRC4 (ENSMMNG00015016321) YIPF4 (ENSMMNG00015016292) ENSMMNG00015016269 BIRC6 (ENSMMNG00015015992) TTC27 (ENSMMNG00015015868) ENSMMNG00015015816 LTBP1 (ENSMMNG00015015497) RASGRP3 (ENSMMNG00015015385) FAM98A (ENSMMNG00015015369) ENSMMNG00015015356 CRIM1 (ENSMMNG00015015317) FEZ2 (ENSMMNG00015015286) VIT (ENSMMNG00015015229) ENSMMNG00015015212 ##22 STRN (ENSMMNG00015015159) HEATR5B (ENSMMNG00015015126) GPATCH11 (ENSMMNG00015015092) EIF2AK2 (ENSMMNG00015015049) ENSMMNG00015015023 CEBPZ (ENSMMNG00015014996) NDUFAF7 (ENSMMNG00015014964) PRKD3 (ENSMMNG00015014946) QPCT (ENSMMNG00015014929) ENSMMNG00015014923 ENSMMNG00015014851 CYP1B1 (ENSMMNG00015014750) ENSMMNG00015014670 HNRNPLL (ENSMMNG00015014579) GALM (ENSMMNG00015014534) Narwhal MODERN SPECIES 308 USP3 (ENSMMNG00015010320) ENSMMNG00015010276 CA12 (ENSMMNG00015010246) APH1B (ENSMMNG00015010212) #10 RAB8B (ENSMMNG00015010188) #11 ENSMMNG00015010167 LACTB (ENSMMNG00015010148) #13 TPM1 (ENSMMNG00015009957) #14 TLN2 (ENSMMNG00015009817) #16 ENSMMNG00015009789 VPS13C (ENSMMNG00015009472) #19 ENSMMNG00015009305 ENSMMNG00015009303 RORA (ENSMMNG00015009290) #20 ICE2 (ENSMMNG00015009274) #21 ANXA2 (ENSMMNG00015009260) ##22 FOXB1 (ENSMMNG00015009255) #23 ENSMMNG00015009251 BNIP2 (ENSMMNG00015009206) #24 ENSMMNG00015009139 #25 GCNT3 (ENSMMNG00015009131) #26 FAM81A (ENSMMNG00015009117) #28 MYO1E (ENSMMNG00015009083) #30 CCNB2 (ENSMMNG00015009062) #32 ENSMMNG00015009045 RNF111 (ENSMMNG00015009033) #33 SLTM (ENSMMNG00015009010) #34 MINDY2 (ENSMMNG00015008982) #36 ADAM10 (ENSMMNG00015008952) #37 LIPC (ENSMMNG00015008926) AQP9 (ENSMMNG00015008896) Sperm whale DUPLICATION Sperm whale MODERN SPECIES 3 SPAST (ENSPCTG00005009915) SLC30A6 (ENSPCTG00005010404) NLRC4 (ENSPCTG00005010708) YIPF4 (ENSPCTG00005010800) BIRC6 (ENSPCTG00005010865) TTC27 (ENSPCTG00005011543) LTBP1 (ENSPCTG00005011719) RASGRP3 (ENSPCTG00005013392) FAM98A (ENSPCTG00005013481) ENSPCTG00005013542 CRIM1 (ENSPCTG00005013633) FEZ2 (ENSPCTG00005013920) VIT (ENSPCTG00005014047) ENSPCTG00005014489 STRN (ENSPCTG00005014554) ENSPCTG00005014838 ##22 HEATR5B (ENSPCTG00005014910) GPATCH11 (ENSPCTG00005014987) EIF2AK2 (ENSPCTG00005015144) ENSPCTG00005015488 CEBPZ (ENSPCTG00005015556) NDUFAF7 (ENSPCTG00005015620) PRKD3 (ENSPCTG00005015677) QPCT (ENSPCTG00005005906) CDC42EP3 (ENSPCTG00005005921) ENSPCTG00005005946 CYP1B1 (ENSPCTG00005006058) ATL2 (ENSPCTG00005006102) HNRNPLL (ENSPCTG00005006242) GALM (ENSPCTG00005006414) SRSF7 (ENSPCTG00005006453) Sperm whale MODERN SPECIES 2 FAN1 (ENSPCTG00005019619) MTMR10 (ENSPCTG00005019736) ENSPCTG00005019850 ENSPCTG00005019875 ENSPCTG00005019911 ENSPCTG00005020045 ENSPCTG00005020071 CTSH (ENSPCTG00005020280) ANKRD34C (ENSPCTG00005020376) TMED3 (ENSPCTG00005020394) MINAR1 (ENSPCTG00005020438) MTHFS (ENSPCTG00005020474) BCL2A1 (ENSPCTG00005020519) ZFAND6 (ENSPCTG00005020547) FAH (ENSPCTG00005020652) ENSPCTG00005020692 ##22 CTXND1 (ENSPCTG00005020710) ENSPCTG00005020719 ENSPCTG00005020763 ARNT2 (ENSPCTG00005020801) ABHD17C (ENSPCTG00005020976) ENSPCTG00005021009 CEMIP (ENSPCTG00005021045) MESD (ENSPCTG00005021237) TLNRD1 (ENSPCTG00005021255) CFAP161 (ENSPCTG00005021263) IL16 (ENSPCTG00005021337) STARD5 (ENSPCTG00005021416) TMC3 (ENSPCTG00005021470) ENSPCTG00005021570 MEX3B (ENSPCTG00005021576) Sperm whale MODERN SPECIES 2 ENSPCTG00005011985 USP3 (ENSPCTG00005011601) ENSPCTG00005011519 CA12 (ENSPCTG00005011257) APH1B (ENSPCTG00005011178) #10 RAB8B (ENSPCTG00005011157) #11 LACTB (ENSPCTG00005011045) #13 TPM1 (ENSPCTG00005010565) #14 TLN2 (ENSPCTG00005010395) #16 ENSPCTG00005010311 ENSPCTG00005010262 VPS13C (ENSPCTG00005010003) #19 ENSPCTG00005009916 RORA (ENSPCTG00005009731) #20 ICE2 (ENSPCTG00005009584) #21 ANXA2 (ENSPCTG00005009521) ##22 FOXB1 (ENSPCTG00005009501) #23 BNIP2 (ENSPCTG00005009246) #24 GTF2A2 (ENSPCTG00005009084) #25 GCNT3 (ENSPCTG00005009050) #26 FAM81A (ENSPCTG00005009006) #28 MYO1E (ENSPCTG00005008840) #30 CCNB2 (ENSPCTG00005008748) #32 RNF111 (ENSPCTG00005006164) #33 SLTM (ENSPCTG00005006094) #34 ENSPCTG00005006055 MINDY2 (ENSPCTG00005006000) #36 ADAM10 (ENSPCTG00005005786) #37 LIPC (ENSPCTG00005005721) AQP9 (ENSPCTG00005005660) ALDH1A2 (ENSPCTG00005005493) Camelidae ANCESTRAL SPECIES 23 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Alpaca MODERN SPECIES 2338 RORA (ENSVPAG00000007893) #20 ICE2 (ENSVPAG00000007890) #21 ANXA2 (ENSVPAG00000007888) ##22 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 204 ADGRG4 (ENSCDRG00005010020) ENSCDRG00005009766 FHL1 (ENSCDRG00005009138) SLC9A6 (ENSCDRG00005015524) MMGT1 (ENSCDRG00005015491) ENSCDRG00005015478 INTS6L (ENSCDRG00005015354) ZNF449 (ENSCDRG00005015299) ZNF75D (ENSCDRG00005015246) ENSCDRG00005015225 ENSCDRG00005015204 ENSCDRG00005015161 SMIM10 (ENSCDRG00005015146) ENSCDRG00005015116 MOSPD1 (ENSCDRG00005015035) ENSCDRG00005015009 ##22 ENSCDRG00005014967 PABIR2 (ENSCDRG00005014905) PLAC1 (ENSCDRG00005014869) HPRT1 (ENSCDRG00005014691) PHF6 (ENSCDRG00005014561) CCDC160 (ENSCDRG00005014537) GPC3 (ENSCDRG00005014241) GPC4 (ENSCDRG00005014187) ENSCDRG00005014131 HS6ST2 (ENSCDRG00005014049) MBNL3 (ENSCDRG00005013555) RAP2C (ENSCDRG00005013469) FRMD7 (ENSCDRG00005013245) STK26 (ENSCDRG00005012797) OR13H1 (ENSCDRG00005012761) Arabian camel MODERN SPECIES 32 CALML4 (ENSCDRG00005003629) CLN6 (ENSCDRG00005003662) ENSCDRG00005003720 #13 ENSCDRG00005003749 RAB8B (ENSCDRG00005003808) #11 APH1B (ENSCDRG00005003835) #10 CA12 (ENSCDRG00005003913) ENSCDRG00005004006 ENSCDRG00005006370 TPM1 (ENSCDRG00005006508) #14 TLN2 (ENSCDRG00005008648) #16 ENSCDRG00005009161 VPS13C (ENSCDRG00005009482) #19 RORA (ENSCDRG00005010112) #20 ICE2 (ENSCDRG00005010259) #21 ENSCDRG00005010380 ##22 FOXB1 (ENSCDRG00005010590) #23 BNIP2 (ENSCDRG00005010618) #24 GTF2A2 (ENSCDRG00005010692) #25 GCNT3 (ENSCDRG00005010851) #26 FAM81A (ENSCDRG00005010891) #28 MYO1E (ENSCDRG00005010981) #30 CCNB2 (ENSCDRG00005011168) #32 RNF111 (ENSCDRG00005011330) #33 SLTM (ENSCDRG00005011603) #34 MINDY2 (ENSCDRG00005011843) #36 ENSCDRG00005011957 ADAM10 (ENSCDRG00005011988) #37 LIPC (ENSCDRG00005012154) ALDH1A2 (ENSCDRG00005012276) AQP9 (ENSCDRG00005012783) Arabian camel MODERN SPECIES 4 EXTL1 (ENSCDRG00005005432) PAFAH2 (ENSCDRG00005005371) STMN1 (ENSCDRG00005005334) PAQR7 (ENSCDRG00005005321) AUNIP (ENSCDRG00005005301) MTFR1L (ENSCDRG00005005263) ENSCDRG00005005250 ENSCDRG00005005197 MAN1C1 (ENSCDRG00005005111) LDLRAP1 (ENSCDRG00005005069) MACO1 (ENSCDRG00005004933) ENSCDRG00005004654 TMEM50A (ENSCDRG00005004599) ENSCDRG00005004554 SYF2 (ENSCDRG00005004530) ENSCDRG00005004517 ##22 RUNX3 (ENSCDRG00005004492) CLIC4 (ENSCDRG00005004479) SRRM1 (ENSCDRG00005004402) NCMAP (ENSCDRG00005004364) RCAN3 (ENSCDRG00005004258) NIPAL3 (ENSCDRG00005004204) STPG1 (ENSCDRG00005004130) GRHL3 (ENSCDRG00005003967) ENSCDRG00005003900 IL22RA1 (ENSCDRG00005003864) MYOM3 (ENSCDRG00005003689) SRSF10 (ENSCDRG00005003602) PNRC2 (ENSCDRG00005003571) ENSCDRG00005003543 CNR2 (ENSCDRG00005003510) Suina ANCESTRAL SPECIES 12 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00910000147045 #17 ENSGT00940000162206.g ENSGT00930000152855 ENSGT00940000162206.h ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Pig MODERN SPECIES CA12 (ENSSSCG00000004565) APH1B (ENSSSCG00000032949) #10 RAB8B (ENSSSCG00000026571) #11 RPS27L (ENSSSCG00000023158) #12 LACTB (ENSSSCG00000004569) #13 TPM1 (ENSSSCG00000004570) #14 TLN2 (ENSSSCG00000024088) #16 ENSSSCG00000046767 ENSSSCG00000055870 ENSSSCG00000004572 ENSSSCG00000035016 ENSSSCG00000004573 VPS13C (ENSSSCG00000036431) #19 RORA (ENSSSCG00000004576) #20 ICE2 (ENSSSCG00000004577) #21 ANXA2 (ENSSSCG00000004578) ##22 ENSSSCG00000048426 FOXB1 (ENSSSCG00000035244) #23 BNIP2 (ENSSSCG00000004582) #24 ENSSSCG00000004583 #25 GCNT3 (ENSSSCG00000004584) #26 ENSSSCG00000063018 FAM81A (ENSSSCG00000004586) #28 MYO1E (ENSSSCG00000004587) #30 CCNB2 (ENSSSCG00000004588) #32 RNF111 (ENSSSCG00000004589) #33 SLTM (ENSSSCG00000004592) #34 ENSSSCG00000034769 MINDY2 (ENSSSCG00000024131) #36 ADAM10 (ENSSSCG00000004595) #37 ENSSSCG00000024660 Chacoan peccary MODERN SPECIES 191 RORA (ENSCWAG00000000446) #20 ICE2 (ENSCWAG00000000380) #21 ANXA2 (ENSCWAG00000000349) ##22 ENSCWAG00000000340 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Carnivora ANCESTRAL SPECIES ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Felidae ANCESTRAL SPECIES 1 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00940000164336 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Cat MODERN SPECIES 237 FBXL22 (ENSFCAG00000046790) USP3 (ENSFCAG00000028788) CA12 (ENSFCAG00000029058) APH1B (ENSFCAG00000040244) #10 ENSFCAG00000053373 ENSFCAG00000053387 RAB8B (ENSFCAG00000031584) #11 ENSFCAG00000033932 LACTB (ENSFCAG00000027796) #13 TPM1 (ENSFCAG00000037855) #14 TLN2 (ENSFCAG00000007306) #16 ENSFCAG00000040967 VPS13C (ENSFCAG00000026881) #19 RORA (ENSFCAG00000013642) #20 ICE2 (ENSFCAG00000024442) #21 ANXA2 (ENSFCAG00000007862) ##22 FOXB1 (ENSFCAG00000026520) #23 BNIP2 (ENSFCAG00000012916) #24 GTF2A2 (ENSFCAG00000012914) #25 GCNT3 (ENSFCAG00000012912) #26 FAM81A (ENSFCAG00000022356) #28 MYO1E (ENSFCAG00000009414) #30 CCNB2 (ENSFCAG00000009413) #32 RNF111 (ENSFCAG00000009412) #33 ADAM10 (ENSFCAG00000023688) #34 MINDY2 (ENSFCAG00000025467) #36 LIPC (ENSFCAG00000008009) ALDH1A2 (ENSFCAG00000033553) AQP9 (ENSFCAG00000028244) POLR2M (ENSFCAG00000041205) MYZAP (ENSFCAG00000014906) Panthera ANCESTRAL SPECIES 3 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00940000164336 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00930000152855 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Tiger MODERN SPECIES 204 DAPK2 (ENSPTIG00000020724) HERC1 (ENSPTIG00000016505) ENSPTIG00000014494 USP3 (ENSPTIG00000010649) CA12 (ENSPTIG00000008179) APH1B (ENSPTIG00000007498) #10 ENSPTIG00000007292 RAB8B (ENSPTIG00000005636) #11 ENSPTIG00000000664 ##12 LACTB (ENSPTIG00000021953) #13 TPM1 (ENSPTIG00000020687) #14 TLN2 (ENSPTIG00000013165) #16 VPS13C (ENSPTIG00000020414) #19 RORA (ENSPTIG00000015398) #20 ICE2 (ENSPTIG00000013570) #21 ANXA2 (ENSPTIG00000011256) ##22 FOXB1 (ENSPTIG00000011045) #23 BNIP2 (ENSPTIG00000010345) #24 GTF2A2 (ENSPTIG00000008342) #25 FAM81A (ENSPTIG00000007107) #28 MYO1E (ENSPTIG00000002391) #30 CCNB2 (ENSPTIG00000022086) #32 RNF111 (ENSPTIG00000022057) #33 SLTM (ENSPTIG00000021933) #34 MINDY2 (ENSPTIG00000021426) #36 ADAM10 (ENSPTIG00000020483) #37 LIPC (ENSPTIG00000017416) AQP9 (ENSPTIG00000016760) ALDH1A2 (ENSPTIG00000021049) POLR2M (ENSPTIG00000019395) MYZAP (ENSPTIG00000017186) Panthera_a ANCESTRAL SPECIES 15 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00940000164336 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.i ENSGT00930000152855 ENSGT00940000162206.j ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D leopard DUPLICATION leopard MODERN SPECIES 25 ENSPPRG00000021125 PCDH7 (ENSPPRG00000001154) STIM2 (ENSPPRG00000000768) TBC1D19 (ENSPPRG00000023259) ENSPPRG00000023897 CCKAR (ENSPPRG00000024018) RBPJ (ENSPPRG00000024386) SMIM20 (ENSPPRG00000018812) SEL1L3 (ENSPPRG00000018369) ENSPPRG00000009004 ##22 SLC34A2 (ENSPPRG00000008628) ANAPC4 (ENSPPRG00000006664) ZCCHC4 (ENSPPRG00000006329) PI4K2B (ENSPPRG00000006151) SEPSECS (ENSPPRG00000005618) LGI2 (ENSPPRG00000005473) CCDC149 (ENSPPRG00000005074) SOD3 (ENSPPRG00000020880) DHX15 (ENSPPRG00000002164) ENSPPRG00000020851 PPARGC1A (ENSPPRG00000001711) GBA3 (ENSPPRG00000000195) ADGRA3 (ENSPPRG00000022711) KCNIP4 (ENSPPRG00000023823) PACRGL (ENSPPRG00000024486) leopard MODERN SPECIES 540 ENSPPRG00000012405 ##22 leopard MODERN SPECIES 7 USP3 (ENSPPRG00000004518) CA12 (ENSPPRG00000002981) APH1B (ENSPPRG00000002047) #10 RAB8B (ENSPPRG00000000194) #11 ENSPPRG00000023087 LACTB (ENSPPRG00000023298) #13 TPM1 (ENSPPRG00000023409) #14 ENSPPRG00000023820 ##14 TLN2 (ENSPPRG00000024152) #16 ENSPPRG00000024704 ENSPPRG00000024744 ENSPPRG00000014483 VPS13C (ENSPPRG00000024819) #19 RORA (ENSPPRG00000025030) #20 ICE2 (ENSPPRG00000019966) #21 ANXA2 (ENSPPRG00000017032) ##22 FOXB1 (ENSPPRG00000014358) #23 BNIP2 (ENSPPRG00000015819) #24 GTF2A2 (ENSPPRG00000015117) #25 GCNT3 (ENSPPRG00000022210) #26 FAM81A (ENSPPRG00000014412) #28 MYO1E (ENSPPRG00000013746) #30 CCNB2 (ENSPPRG00000013358) #32 RNF111 (ENSPPRG00000012896) #33 ENSPPRG00000022159 SLTM (ENSPPRG00000012400) #34 MINDY2 (ENSPPRG00000011830) #36 ADAM10 (ENSPPRG00000010697) #37 LIPC (ENSPPRG00000010248) ALDH1A2 (ENSPPRG00000009754) AQP9 (ENSPPRG00000008797) lion DUPLICATION lion MODERN SPECIES 88 CYLC1 (ENSPLOG00000017131) RPS6KA6 (ENSPLOG00000016820) HDX (ENSPLOG00000016668) ENSPLOG00000016617 ENSPLOG00000016565 DACH2 (ENSPLOG00000016162) KLHL4 (ENSPLOG00000016046) ENSPLOG00000016027 PABPC5 (ENSPLOG00000016010) ENSPLOG00000015979 ENSPLOG00000015940 ENSPLOG00000015911 ENSPLOG00000015763 DIAPH2 (ENSPLOG00000014542) PCDH19 (ENSPLOG00000021513) ENSPLOG00000021486 ##22 TNMD (ENSPLOG00000021456) TSPAN6 (ENSPLOG00000021416) SRPX2 (ENSPLOG00000021382) SYTL4 (ENSPLOG00000021355) CSTF2 (ENSPLOG00000021229) NOX1 (ENSPLOG00000021013) XKRX (ENSPLOG00000020949) ENSPLOG00000020941 GPRASP2 (ENSPLOG00000020928) ENSPLOG00000020887 ARMCX5 (ENSPLOG00000020862) ENSPLOG00000020841 TMSB15A (ENSPLOG00000020822) ENSPLOG00000020751 ENSPLOG00000020737 lion MODERN SPECIES 6 FBXL22 (ENSPLOG00000013600) USP3 (ENSPLOG00000013694) CA12 (ENSPLOG00000014410) APH1B (ENSPLOG00000014734) #10 ENSPLOG00000014920 RAB8B (ENSPLOG00000014958) #11 ENSPLOG00000014988 LACTB (ENSPLOG00000015093) #13 TPM1 (ENSPLOG00000015292) #14 TLN2 (ENSPLOG00000015663) #16 ENSPLOG00000016368 ENSPLOG00000016384 VPS13C (ENSPLOG00000016750) #19 RORA (ENSPLOG00000019217) #20 ICE2 (ENSPLOG00000019330) #21 ANXA2 (ENSPLOG00000019362) ##22 FOXB1 (ENSPLOG00000019463) #23 BNIP2 (ENSPLOG00000019485) #24 GTF2A2 (ENSPLOG00000019533) #25 GCNT3 (ENSPLOG00000019578) #26 FAM81A (ENSPLOG00000019602) #28 MYO1E (ENSPLOG00000019658) #30 CCNB2 (ENSPLOG00000019712) #32 RNF111 (ENSPLOG00000019792) #33 SLTM (ENSPLOG00000019866) #34 MINDY2 (ENSPLOG00000019972) #36 ADAM10 (ENSPLOG00000020025) #37 LIPC (ENSPLOG00000000384) ALDH1A2 (ENSPLOG00000000630) AQP9 (ENSPLOG00000000752) POLR2M (ENSPLOG00000000778) Caniformia ANCESTRAL SPECIES 12 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Caniformia_b DUPLICATION Caniformia_b DUPLICATION Caniformia_b ANCESTRAL SPECIES ENSGT00940000154257.j.lb.a ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000154257.j.lb.a ##22 Ursus ANCESTRAL SPECIES ENSGT00940000154257.j.lb.a ##22 American black bear MODERN SPECIES 2340 RBM28 (ENSUAMG00000006949) PRRT4 (ENSUAMG00000007108) ENSUAMG00000007110 ##22 IMPDH1 (ENSUAMG00000007140) Mustelinae ANCESTRAL SPECIES ENSGT00940000154257.j.lb.a ##22 Ferret MODERN SPECIES 286 ENSMPUG00000005678 HMGCR (ENSMPUG00000005662) CERT1 (ENSMPUG00000005653) POLK (ENSMPUG00000005641) ANKDD1B (ENSMPUG00000005630) POC5 (ENSMPUG00000005619) SV2C (ENSMPUG00000005606) F2RL2 (ENSMPUG00000005597) IQGAP2 (ENSMPUG00000005569) F2R (ENSMPUG00000005558) F2RL1 (ENSMPUG00000005551) CRHBP (ENSMPUG00000005538) AGGF1 (ENSMPUG00000005518) PDE8B (ENSMPUG00000005262) WDR41 (ENSMPUG00000005197) ENSMPUG00000018800 ##22 OTP (ENSMPUG00000005191) ENSMPUG00000005179 ENSMPUG00000018799 ENSMPUG00000005174 AP3B1 (ENSMPUG00000005160) SCAMP1 (ENSMPUG00000005152) LHFPL2 (ENSMPUG00000005146) ARSB (ENSMPUG00000005100) DMGDH (ENSMPUG00000005093) BHMT (ENSMPUG00000005014) JMY (ENSMPUG00000005003) HOMER1 (ENSMPUG00000004991) TENT2 (ENSMPUG00000004983) CMYA5 (ENSMPUG00000004971) MTX3 (ENSMPUG00000004895) Caniformia_b ANCESTRAL SPECIES ENSGT00940000154257.j.lb.b ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000154257.j.lb.b ##22 Ursus ANCESTRAL SPECIES ENSGT00940000154257.j.lb.b ##22 Polar bear MODERN SPECIES 195 TUT7 (ENSUMAG00000004929) ENSUMAG00000004926 ENSUMAG00000004924 NAA35 (ENSUMAG00000004913) ENSUMAG00000004909 ##22 AGTPBP1 (ENSUMAG00000004888) NTRK2 (ENSUMAG00000004861) SLC28A3 (ENSUMAG00000004840) RMI1 (ENSUMAG00000004832) HNRNPK (ENSUMAG00000004818) C9orf64 (ENSUMAG00000004812) KIF27 (ENSUMAG00000004800) GKAP1 (ENSUMAG00000004794) UBQLN1 (ENSUMAG00000004750) IDNK (ENSUMAG00000004724) FRMD3 (ENSUMAG00000004699) RASEF (ENSUMAG00000004670) American black bear MODERN SPECIES 5629 ENSUAMG00000026257 ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154257.j.lb.b ##22 American mink MODERN SPECIES 650 ENSNVIG00000010485 ENSNVIG00000010474 ENSNVIG00000010456 ENSNVIG00000010439 ##22 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j.mb ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Mustelinae ANCESTRAL SPECIES 66 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j.mb ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 Ferret DUPLICATION Ferret MODERN SPECIES 302 POP1 (ENSMPUG00000015250) NIPAL2 (ENSMPUG00000015248) KCNS2 (ENSMPUG00000019753) STK3 (ENSMPUG00000015247) OSR2 (ENSMPUG00000015246) VPS13B (ENSMPUG00000015235) RGS22 (ENSMPUG00000015232) FBXO43 (ENSMPUG00000015226) SPAG1 (ENSMPUG00000015217) RNF19A (ENSMPUG00000015199) ANKRD46 (ENSMPUG00000015198) SNX31 (ENSMPUG00000015195) PABPC1 (ENSMPUG00000015163) ENSMPUG00000015161 YWHAZ (ENSMPUG00000015158) ENSMPUG00000019752 ##22 GRHL2 (ENSMPUG00000015153) NCALD (ENSMPUG00000015152) RRM2B (ENSMPUG00000015147) UBR5 (ENSMPUG00000015136) ODF1 (ENSMPUG00000015134) KLF10 (ENSMPUG00000015132) AZIN1 (ENSMPUG00000015128) ENSMPUG00000015127 ATP6V1C1 (ENSMPUG00000015122) ENSMPUG00000019751 FZD6 (ENSMPUG00000015120) CTHRC1 (ENSMPUG00000015116) SLC25A32 (ENSMPUG00000015100) ENSMPUG00000015099 ENSMPUG00000015098 Ferret MODERN SPECIES 398 ENSMPUG00000003475 ENSMPUG00000003479 ##22 ENSMPUG00000003481 ENSMPUG00000003484 ENSMPUG00000003490 ENSMPUG00000003496 TCHHL1 (ENSMPUG00000003502) ENSMPUG00000003509 ENSMPUG00000003517 ENSMPUG00000003526 THEM5 (ENSMPUG00000003530) ENSMPUG00000003542 RORC (ENSMPUG00000003550) LINGO4 (ENSMPUG00000018420) TDRKH (ENSMPUG00000003558) OAZ3 (ENSMPUG00000003571) MRPL9 (ENSMPUG00000003590) Ferret MODERN SPECIES 228 HERC1 (ENSMPUG00000000611) FBXL22 (ENSMPUG00000000624) USP3 (ENSMPUG00000000628) CA12 (ENSMPUG00000000635) APH1B (ENSMPUG00000000639) #10 RAB8B (ENSMPUG00000000643) #11 RPS27L (ENSMPUG00000000647) #12 LACTB (ENSMPUG00000000649) #13 TPM1 (ENSMPUG00000000651) #14 TLN2 (ENSMPUG00000000655) #16 ENSMPUG00000000658 VPS13C (ENSMPUG00000000660) #19 ENSMPUG00000000744 RORA (ENSMPUG00000000745) #20 ICE2 (ENSMPUG00000000759) #21 ANXA2 (ENSMPUG00000000762) ##22 FOXB1 (ENSMPUG00000019446) #23 BNIP2 (ENSMPUG00000000804) #24 GCNT3 (ENSMPUG00000019447) #26 American mink DUPLICATION American mink MODERN SPECIES 10 OSR2 (ENSNVIG00000000004) VPS13B (ENSNVIG00000000017) ENSNVIG00000000364 ENSNVIG00000000371 RGS22 (ENSNVIG00000000412) FBXO43 (ENSNVIG00000000429) ENSNVIG00000000441 POLR2K (ENSNVIG00000000467) SPAG1 (ENSNVIG00000000482) RN19A (ENSNVIG00000000513) ANR46 (ENSNVIG00000000557) SNX31 (ENSNVIG00000000636) PABPC1 (ENSNVIG00000000651) ENSNVIG00000000688 ZNF706 (ENSNVIG00000000720) ENSNVIG00000000737 ##22 GRHL2 (ENSNVIG00000000748) NCALD (ENSNVIG00000000941) ENSNVIG00000000956 UBR5 (ENSNVIG00000000967) ODF1 (ENSNVIG00000001125) KLF10 (ENSNVIG00000001151) AZIN1 (ENSNVIG00000001180) ATP6V1C1 (ENSNVIG00000001221) BAALC (ENSNVIG00000001290) FZD6 (ENSNVIG00000001308) CTHRC1 (ENSNVIG00000001341) MFTC (ENSNVIG00000001350) DCAF13 (ENSNVIG00000001369) RIMS2 (ENSNVIG00000001435) DCSTAMP (ENSNVIG00000001607) American mink MODERN SPECIES 237 AMOT (ENSNVIG00000008256) LHFPL1 (ENSNVIG00000008299) RTL4 (ENSNVIG00000008313) ENSNVIG00000008321 ##22 TRPC5 (ENSNVIG00000008332) TRPC5OS (ENSNVIG00000008343) ENSNVIG00000008364 ENSNVIG00000008404 SERTM2 (ENSNVIG00000008429) DCX (ENSNVIG00000008438) CAPN6 (ENSNVIG00000008493) PAK3 (ENSNVIG00000008551) American mink MODERN SPECIES 46 CA12 (ENSNVIG00000018640) APH1B (ENSNVIG00000018717) #10 RAB8B (ENSNVIG00000018748) #11 ENSNVIG00000018758 LACTB (ENSNVIG00000018777) #13 TPM1 (ENSNVIG00000018804) #14 ENSNVIG00000018989 TLN2 (ENSNVIG00000019004) #16 ENSNVIG00000019176 ENSNVIG00000019183 #17 ENSNVIG00000019200 VPS13C (ENSNVIG00000019284) #19 ENSNVIG00000020366 RORA (ENSNVIG00000020389) #20 NARG2 (ENSNVIG00000020437) #21 ANXA2 (ENSNVIG00000020496) ##22 CHRM3 (ENSNVIG00000020523) Ursidae ANCESTRAL SPECIES 21 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699.f #16 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j.mb ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898.j.a ENSGT00950000183065.D Ursus ANCESTRAL SPECIES 73 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699.f #16 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j.mb ##22 ENSGT00940000161970 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898.j.a ENSGT00950000183065.D American black bear MODERN SPECIES 343 RORA (ENSUAMG00000019101) #20 ICE2 (ENSUAMG00000019143) #21 ENSUAMG00000019164 ##22 Polar bear MODERN SPECIES 282 ENSUMAG00000024552 #12 LACTB (ENSUMAG00000024551) #13 TPM1 (ENSUMAG00000024489) #14 TLN2 (ENSUMAG00000024313) #16 VPS13C (ENSUMAG00000024057) #19 ENSUMAG00000023995 RORA (ENSUMAG00000023981) #20 ICE2 (ENSUMAG00000023974) #21 ENSUMAG00000023968 ##22 ENSUMAG00000023966 BNIP2 (ENSUMAG00000023960) #24 GTF2A2 (ENSUMAG00000023959) #25 GCNT3 (ENSUMAG00000023958) #26 FAM81A (ENSUMAG00000023957) #28 MYO1E (ENSUMAG00000023955) #30 CCNB2 (ENSUMAG00000023954) #32 RNF111 (ENSUMAG00000023950) #33 SLTM (ENSUMAG00000023678) #34 MINDY2 (ENSUMAG00000023650) #36 ADAM10 (ENSUMAG00000023649) #37 LIPC (ENSUMAG00000023645) AQP9 (ENSUMAG00000023641) ALDH1A2 (ENSUMAG00000023636) POLR2M (ENSUMAG00000023632) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1971 ENSAMEG00000028315 ##22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 2129 ENSAMEG00000030955 ##22 Giant Panda MODERN SPECIES 1509 ENSAMEG00000027434 ##22 Giant Panda MODERN SPECIES 933 ENSAMEG00000024809 ##22 Giant Panda MODERN SPECIES 15 HERC1 (ENSAMEG00000002389) FBXL22 (ENSAMEG00000002387) USP3 (ENSAMEG00000002345) CA12 (ENSAMEG00000002328) APH1B (ENSAMEG00000002312) #10 ENSAMEG00000031452 RAB8B (ENSAMEG00000002292) #11 RPS27L (ENSAMEG00000007270) #12 LACTB (ENSAMEG00000007262) #13 ENSAMEG00000007224 #14 TLN2 (ENSAMEG00000012004) #16 VPS13C (ENSAMEG00000017363) #19 ENSAMEG00000017453 RORA (ENSAMEG00000008017) #20 ICE2 (ENSAMEG00000008039) #21 ENSAMEG00000008055 ##22 FOXB1 (ENSAMEG00000019472) #23 BNIP2 (ENSAMEG00000005709) #24 GTF2A2 (ENSAMEG00000005744) #25 GCNT3 (ENSAMEG00000018673) #26 FAM81A (ENSAMEG00000004782) #28 MYO1E (ENSAMEG00000004643) #30 CCNB2 (ENSAMEG00000004603) #32 RNF111 (ENSAMEG00000004568) #33 SLTM (ENSAMEG00000004537) #34 MINDY2 (ENSAMEG00000026245) #36 ADAM10 (ENSAMEG00000003056) #37 LIPC (ENSAMEG00000003097) ENSAMEG00000010535 ENSAMEG00000010508 AQP9 (ENSAMEG00000010516) Canidae ANCESTRAL SPECIES 15 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921.b ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Canis_lupus DUPLICATION Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES ENSGT00530000063821.b.b ENSGT00940000160907 ENSGT00390000013443.d ENSGT00940000155120.lb.b ENSGT00530000063404.a ENSGT01050000248397 ENSGT00940000155640 ENSGT00940000154434.b ENSGT00940000154434.a ENSGT00390000000375 ENSGT00940000161430 ENSGT00940000161373 ENSGT00390000002955 ENSGT00530000063839 ENSGT00950000183043.a.b.b.a.a.b.h ENSGT00940000154257.j.nb.a ##22 ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT01030000234517.H.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00390000006922.m.b.a.d.fb.a ENSGT00390000002517.a.b.b.d ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000158196 ENSGT00390000010063.c.b ENSGT00950000182964.a.b.a ENSGT00940000159594 ENSGT00490000043356.b Dingo MODERN SPECIES 125 ENSCAFG00020000594 ENSCAFG00020000622 RCL1 (ENSCAFG00020000638) ENSCAFG00020000655 ENSCAFG00020000670 JAK2 (ENSCAFG00020001020) INSL6 (ENSCAFG00020005010) ENSCAFG00020005012 PLGRKT (ENSCAFG00020005050) CD274 (ENSCAFG00020005055) PDCD1LG2 (ENSCAFG00020005060) RIC1 (ENSCAFG00020005108) ERMP1 (ENSCAFG00020005183) ENSCAFG00020005250 ENSCAFG00020005296 ENSCAFG00020005304 ##22 ENSCAFG00020005430 ENSCAFG00020006524 ENSCAFG00020006526 SPTLC1 (ENSCAFG00020006555) ROR2 (ENSCAFG00020006601) ENSCAFG00020006678 ENSCAFG00020006717 NFIL3 (ENSCAFG00020006720) AUH (ENSCAFG00020006749) SYK (ENSCAFG00020006838) DIRAS2 (ENSCAFG00020007016) ENSCAFG00020007083 GADD45G (ENSCAFG00020007172) SEMA4D (ENSCAFG00020007191) SECISBP2 (ENSCAFG00020007224) Dog MODERN SPECIES CDC37L1 (ENSCAFG00845015553) ENSCAFG00845015626 ENSCAFG00845015667 JAK2 (ENSCAFG00845015728) ENSCAFG00845015836 JAK2 (ENSCAFG00845015887) ENSCAFG00845016006 INSL6 (ENSCAFG00845016024) RLN2 (ENSCAFG00845016044) PLGRKT (ENSCAFG00845016070) CD274 (ENSCAFG00845016107) PDCD1LG2 (ENSCAFG00845016232) RIC1 (ENSCAFG00845016384) ENSCAFG00845016712 ENSCAFG00845016939 ENSCAFG00845016963 ##22 ENSCAFG00845017013 ENSCAFG00845017090 ENSCAFG00845017127 ENSCAFG00845017253 ROR2 (ENSCAFG00845017326) ENSCAFG00845017469 ENSCAFG00845017483 AUH (ENSCAFG00845017695) SYK (ENSCAFG00845018106) DIRAS2 (ENSCAFG00845018468) ENSCAFG00845018518 GADD45G (ENSCAFG00845018559) SEMA4D (ENSCAFG00845018763) SECISBP2 (ENSCAFG00845019299) CKS2 (ENSCAFG00845019881) Canis_lupus ANCESTRAL SPECIES ENSGT00940000154257.j.nb.b ##22 Dingo MODERN SPECIES 205 FBXL22 (ENSCAFG00020009419) USP3 (ENSCAFG00020009426) CA12 (ENSCAFG00020009454) APH1B (ENSCAFG00020009470) #10 RAB8B (ENSCAFG00020009474) #11 ENSCAFG00020009482 ENSCAFG00020009484 LACTB (ENSCAFG00020009493) #13 TPM1 (ENSCAFG00020009521) #14 ENSCAFG00020009531 TLN2 (ENSCAFG00020009609) #16 VPS13C (ENSCAFG00020010673) #19 ENSCAFG00020010727 RORA (ENSCAFG00020010743) #20 ICE2 (ENSCAFG00020010796) #21 ENSCAFG00020010905 ##22 FOXB1 (ENSCAFG00020010944) #23 BNIP2 (ENSCAFG00020010953) #24 GTF2A2 (ENSCAFG00020010969) #25 GCNT3 (ENSCAFG00020010978) #26 FAM81A (ENSCAFG00020010984) #28 MYO1E (ENSCAFG00020011013) #30 CCNB2 (ENSCAFG00020011050) #32 RNF111 (ENSCAFG00020011102) #33 SLTM (ENSCAFG00020011253) #34 MINDY2 (ENSCAFG00020011948) #36 ADAM10 (ENSCAFG00020011960) #37 LIPC (ENSCAFG00020011968) AQP9 (ENSCAFG00020011973) ENSCAFG00020011974 ALDH1A2 (ENSCAFG00020011975) Canis_lupus ANCESTRAL SPECIES 17 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921.b ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT01070000253911 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j.ob ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00390000006696.bb ENSGT00940000158898 Dog DUPLICATION Dog MODERN SPECIES 23 HERC1 (ENSCAFG00845021555) FBXL22 (ENSCAFG00845021485) USP3 (ENSCAFG00845021124) CA12 (ENSCAFG00845020844) APH1B (ENSCAFG00845020653) #10 RAB8B (ENSCAFG00845020576) #11 RPS27L (ENSCAFG00845020453) #12 LACTB (ENSCAFG00845020386) #13 TPM1 (ENSCAFG00845019944) #14 TLN2 (ENSCAFG00845019529) #16 ENSCAFG00845019202 VPS13C (ENSCAFG00845018323) #19 ENSCAFG00845018067 RORA (ENSCAFG00845017841) #20 ICE2 (ENSCAFG00845017491) #21 ANXA2 (ENSCAFG00845017171) ##22 FOXB1 (ENSCAFG00845016929) #23 BNIP2 (ENSCAFG00845016807) #24 GTF2A2 (ENSCAFG00845016636) #25 ENSCAFG00845016556 #26 FAM81A (ENSCAFG00845016440) #28 ENSCAFG00845016391 MYO1E (ENSCAFG00845016229) #30 CCNB2 (ENSCAFG00845016098) #32 RNF111 (ENSCAFG00845016023) #33 SLTM (ENSCAFG00845015853) #34 MINDY2 (ENSCAFG00845015725) #36 ADAM10 (ENSCAFG00845015520) #37 LIPC (ENSCAFG00845015307) AQP9 (ENSCAFG00845015193) ENSCAFG00845030206 Dog MODERN SPECIES 18 EP400 (ENSCAFG00845028856) MMP17 (ENSCAFG00845028950) SFSWAP (ENSCAFG00845029019) ADGRD1 (ENSCAFG00845029309) RAN (ENSCAFG00845029617) STX2 (ENSCAFG00845029672) RIMBP2 (ENSCAFG00845029818) PIWIL1 (ENSCAFG00845030071) FZD10 (ENSCAFG00845030138) TMEM132D (ENSCAFG00845030146) GLT1D1 (ENSCAFG00845030197) SLC15A4 (ENSCAFG00845030274) TMEM132C (ENSCAFG00845030310) ENSCAFG00845030391 TMEM132B (ENSCAFG00845030459) ENSCAFG00845030534 ##22 BRI3BP (ENSCAFG00845030556) DHX37 (ENSCAFG00845030575) ENSCAFG00845030599 ENSCAFG00845015591 ENY2 (ENSCAFG00845015629) SCARB1 (ENSCAFG00845015817) NCOR2 (ENSCAFG00845016132) ENSCAFG00845016375 ZNF664 (ENSCAFG00845016535) CCDC92 (ENSCAFG00845016614) ENSCAFG00845016709 ATP6V0A2 (ENSCAFG00845016867) GTF2H3 (ENSCAFG00845017053) EIF2B1 (ENSCAFG00845017139) DDX55 (ENSCAFG00845017243) Dingo DUPLICATION Dingo MODERN SPECIES 77 DUSP4 (ENSCAFG00020000979) ENSCAFG00020000963 ENSCAFG00020000951 ERI1 (ENSCAFG00020000937) MFHAS1 (ENSCAFG00020000927) ENSCAFG00020000904 PRAG1 (ENSCAFG00020000884) LONRF1 (ENSCAFG00020000871) TRMT9B (ENSCAFG00020000857) DLC1 (ENSCAFG00020000757) ENSCAFG00020000735 ENSCAFG00020000723 SGCZ (ENSCAFG00020000702) ENSCAFG00020000696 TUSC3 (ENSCAFG00020000685) ENSCAFG00020000676 ##22 MSR1 (ENSCAFG00020000668) FGF20 (ENSCAFG00020000633) MICU3 (ENSCAFG00020000587) ENSCAFG00020000455 CNOT7 (ENSCAFG00020000443) VPS37A (ENSCAFG00020000439) ENSCAFG00020000431 ENSCAFG00020000381 SLC7A2 (ENSCAFG00020000235) PDGFRL (ENSCAFG00020000216) ENSCAFG00020000165 MTUS1 (ENSCAFG00020000087) FGL1 (ENSCAFG00020000085) PCM1 (ENSCAFG00020000084) ASAH1 (ENSCAFG00020000083) Dingo DUPLICATION Dingo MODERN SPECIES 398 DYTN (ENSCAFG00020027434) FAM237A (ENSCAFG00020000156) ADAM23 (ENSCAFG00020000240) ZDBF2 (ENSCAFG00020000545) CMKLR2 (ENSCAFG00020000614) EEF1B2 (ENSCAFG00020000617) NDUFS1 (ENSCAFG00020000642) INO80D (ENSCAFG00020000661) NRP2 (ENSCAFG00020000746) PARD3B (ENSCAFG00020001089) ICOS (ENSCAFG00020001489) CTLA4 (ENSCAFG00020001506) CD28 (ENSCAFG00020001531) RAPH1 (ENSCAFG00020001630) ABI2 (ENSCAFG00020001752) ENSCAFG00020001784 ##22 ENSCAFG00020001801 CYP20A1 (ENSCAFG00020001812) NBEAL1 (ENSCAFG00020001831) ENSCAFG00020001912 CARF (ENSCAFG00020001932) WDR12 (ENSCAFG00020001958) ICA1L (ENSCAFG00020002040) FAM117B (ENSCAFG00020002101) BMPR2 (ENSCAFG00020002138) NOP58 (ENSCAFG00020002394) ENSCAFG00020002419 KIAA2012 (ENSCAFG00020002449) ENSCAFG00020002503 CDK15 (ENSCAFG00020002551) ALS2 (ENSCAFG00020002611) Dingo MODERN SPECIES 370 SLC17A5 (ENSCAFG00020010051) CD109 (ENSCAFG00020010059) ENSCAFG00020010371 COL12A1 (ENSCAFG00020010384) ENSCAFG00020010663 ENSCAFG00020010664 TMEM30A (ENSCAFG00020010667) FILIP1 (ENSCAFG00020010672) SENP6 (ENSCAFG00020010681) MYO6 (ENSCAFG00020010746) ENSCAFG00020012028 IMPG1 (ENSCAFG00020012039) ENSCAFG00020012087 HTR1B (ENSCAFG00020012099) MEI4 (ENSCAFG00020012119) ENSCAFG00020012134 ##22 ENSCAFG00020012138 ENSCAFG00020012153 IRAK1BP1 (ENSCAFG00020012158) PHIP (ENSCAFG00020012198) ENSCAFG00020012526 ENSCAFG00020012530 LCA5 (ENSCAFG00020012549) ENSCAFG00020012555 ELOVL4 (ENSCAFG00020012560) TTK (ENSCAFG00020012567) BCKDHB (ENSCAFG00020012610) TENT5A (ENSCAFG00020012616) IBTK (ENSCAFG00020012725) ENSCAFG00020014609 TPBG (ENSCAFG00020014610) Red fox DUPLICATION Red fox MODERN SPECIES CA12 (ENSVVUG00000011399) APH1B (ENSVVUG00000011390) #10 ENSVVUG00000011389 RAB8B (ENSVVUG00000011367) #11 ENSVVUG00000011320 #12 LACTB (ENSVVUG00000011297) #13 ENSVVUG00000011290 TPM1 (ENSVVUG00000011282) #14 TLN2 (ENSVVUG00000009412) #16 VPS13C (ENSVVUG00000002780) #19 ENSVVUG00000002002 ENSVVUG00000001972 ENSVVUG00000001953 RORA (ENSVVUG00000001910) #20 ICE2 (ENSVVUG00000001884) #21 ANXA2 (ENSVVUG00000001871) ##22 ENSVVUG00000001864 FOXB1 (ENSVVUG00000001836) #23 BNIP2 (ENSVVUG00000001765) #24 GTF2A2 (ENSVVUG00000001625) #25 GCNT3 (ENSVVUG00000001601) #26 FAM81A (ENSVVUG00000001584) #28 ENSVVUG00000001567 MYO1E (ENSVVUG00000001541) #30 CCNB2 (ENSVVUG00000001497) #32 RNF111 (ENSVVUG00000001485) #33 SLTM (ENSVVUG00000001450) #34 MINDY2 (ENSVVUG00000001426) #36 ADAM10 (ENSVVUG00000001386) #37 LIPC (ENSVVUG00000001352) AQP9 (ENSVVUG00000001306) Red fox MODERN SPECIES 198 ENSVVUG00000007702 ENSVVUG00000007694 ENSVVUG00000007687 ##22 MSR1 (ENSVVUG00000007679) FGF20 (ENSVVUG00000007644) MICU3 (ENSVVUG00000007506) ZDHHC2 (ENSVVUG00000007445) CNOT7 (ENSVVUG00000007434) VPS37A (ENSVVUG00000007423) MTMR7 (ENSVVUG00000007402) SLC7A2 (ENSVVUG00000007388) PDGFRL (ENSVVUG00000007367) ENSVVUG00000007361 ENSVVUG00000007359 ENSVVUG00000007355 MTUS1 (ENSVVUG00000007331) FGL1 (ENSVVUG00000007318) PCM1 (ENSVVUG00000007211) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT01030000234542.b.a.a.b.a.b.l ##14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Equus ANCESTRAL SPECIES 4 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT01030000234542.b.a.a.b.a.b.l ##14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Horse MODERN SPECIES USP3 (ENSECAG00000016660) CA12 (ENSECAG00000017217) APH1B (ENSECAG00000001985) #10 RAB8B (ENSECAG00000036923) #11 RPS27L (ENSECAG00000013269) #12 LACTB (ENSECAG00000053700) #13 TPM1 (ENSECAG00000014949) #14 ENSECAG00000050273 ##14 TLN2 (ENSECAG00000020488) #16 ENSECAG00000052463 ENSECAG00000035298 #18 ENSECAG00000038352 #18 VPS13C (ENSECAG00000017182) #19 RORA (ENSECAG00000016384) #20 ICE2 (ENSECAG00000008412) #21 ANXA2 (ENSECAG00000012670) ##22 FOXB1 (ENSECAG00000004144) #23 BNIP2 (ENSECAG00000022557) #24 GCNT3 (ENSECAG00000004325) #26 GTF2A2 (ENSECAG00000012182) #25 FAM81A (ENSECAG00000012692) #28 ENSECAG00000038907 MYO1E (ENSECAG00000024352) #30 CCNB2 (ENSECAG00000014813) #32 RNF111 (ENSECAG00000024602) #33 SLTM (ENSECAG00000011267) #34 MINDY2 (ENSECAG00000019456) #36 ENSECAG00000059129 ENSECAG00000052250 ADAM10 (ENSECAG00000007963) #37 LIPC (ENSECAG00000020896) Donkey MODERN SPECIES 11 CA12 (ENSEASG00005005325) APH1B (ENSEASG00005005328) #10 ENSEASG00005005334 RAB8B (ENSEASG00005038003) #11 RPS27L (ENSEASG00005031631) #12 LACTB (ENSEASG00005005348) #13 ENSEASG00005031100 #14 ENSEASG00005024602 ##14 TLN2 (ENSEASG00005005435) #16 ENSEASG00005032522 ENSEASG00005032205 ENSEASG00005030086 VPS13C (ENSEASG00005006073) #19 RORA (ENSEASG00005006718) #20 ICE2 (ENSEASG00005006725) #21 ANXA2 (ENSEASG00005006755) ##22 FOXB1 (ENSEASG00005006761) #23 BNIP2 (ENSEASG00005006764) #24 GTF2A2 (ENSEASG00005006771) #25 GCNT3 (ENSEASG00005006772) #26 FAM81A (ENSEASG00005006773) #28 MYO1E (ENSEASG00005006777) #30 CCNB2 (ENSEASG00005006782) #32 RNF111 (ENSEASG00005006789) #33 SLTM (ENSEASG00005006792) #34 MINDY2 (ENSEASG00005006799) #36 ADAM10 (ENSEASG00005006804) #37 LIPC (ENSEASG00005006810) AQP9 (ENSEASG00005006825) ALDH1A2 (ENSEASG00005006828) POLR2M (ENSEASG00005006830) Chiroptera ANCESTRAL SPECIES 17 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00940000164336 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Megabat MODERN SPECIES 2671 RORA (ENSPVAG00000011408) #20 ICE2 (ENSPVAG00000011404) #21 ANXA2 (ENSPVAG00000011401) ##22 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00930000152855 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00960000192699 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Greater horseshoe bat MODERN SPECIES 24 CA12 (ENSRFEG00010009883) APH1B (ENSRFEG00010009953) #10 RAB8B (ENSRFEG00010010042) #11 ENSRFEG00010010077 ##12 LACTB (ENSRFEG00010010152) #13 ENSRFEG00010010201 TPM1 (ENSRFEG00010010379) #14 ENSRFEG00010011385 TLN2 (ENSRFEG00010011447) #16 ENSRFEG00010011581 ENSRFEG00010011606 ENSRFEG00010011647 VPS13C (ENSRFEG00010011688) #19 RORA (ENSRFEG00010011929) #20 ICE2 (ENSRFEG00010012249) #21 ANXA2 (ENSRFEG00010012337) ##22 ENSRFEG00010012519 ENSRFEG00010012585 FOXB1 (ENSRFEG00010012632) #23 BNIP2 (ENSRFEG00010012661) #24 ENSRFEG00010012833 #25 GCNT3 (ENSRFEG00010012952) #26 FAM81A (ENSRFEG00010012996) #28 MYO1E (ENSRFEG00010013049) #30 CCNB2 (ENSRFEG00010013118) #32 RNF111 (ENSRFEG00010013280) #33 ENSRFEG00010013430 SLTM (ENSRFEG00010013490) #34 MINDY2 (ENSRFEG00010013660) #36 ENSRFEG00010013690 ADAM10 (ENSRFEG00010013728) #37 Microbat DUPLICATION Microbat MODERN SPECIES 944 SGCG (ENSMLUG00000006305) SACS (ENSMLUG00000011827) TNFRSF19 (ENSMLUG00000005730) MIPEP (ENSMLUG00000001287) HTR2A (ENSMLUG00000007661) ESD (ENSMLUG00000028466) LRCH1 (ENSMLUG00000012524) RUBCNL (ENSMLUG00000007642) ENSMLUG00000009728 LCP1 (ENSMLUG00000014393) CPB2 (ENSMLUG00000006959) ZC3H13 (ENSMLUG00000006920) ENSMLUG00000009265 COG6 (ENSMLUG00000015423) ENSMLUG00000007752 ENSMLUG00000023120 ##22 ENSMLUG00000014595 ENSMLUG00000024202 MRPS31 (ENSMLUG00000008416) SLC25A15 (ENSMLUG00000008471) ENSMLUG00000029270 ENSMLUG00000027304 ENSMLUG00000022837 THSD1 (ENSMLUG00000003833) VPS36 (ENSMLUG00000000128) ENSMLUG00000000132 ENSMLUG00000027805 ALG11 (ENSMLUG00000028693) ATP7B (ENSMLUG00000012070) CCDC70 (ENSMLUG00000024144) ENSMLUG00000017495 Microbat MODERN SPECIES 1141 ENSMLUG00000013942 ENSMLUG00000000190 #18 VPS13C (ENSMLUG00000017467) #19 ENSMLUG00000023187 RORA (ENSMLUG00000002493) #20 ICE2 (ENSMLUG00000002476) #21 ANXA2 (ENSMLUG00000002464) ##22 ENSMLUG00000003104 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000154257.i.b #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 Primates ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Tarsier DUPLICATION Tarsier MODERN SPECIES 2595 ENSTSYG00000002380 #21 ANXA2 (ENSTSYG00000003719) ##22 ENSTSYG00000012056 FOXB1 (ENSTSYG00000006726) #23 Tarsier MODERN SPECIES 4698 ENSTSYG00000035936 ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Platyrrhini ANCESTRAL SPECIES 14 ENSGT00390000013594 ENSGT00940000154939 ENSGT00940000153335.a.b.w.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.s.a ENSGT00940000158210 ENSGT00940000158794 ENSGT00940000154257.j ##22 ENSGT00940000160543 ENSGT01030000234543.B.f ENSGT00940000159378 ENSGT00940000159406 ENSGT00940000158924 ENSGT00940000153441.a.b ENSGT00940000161556 ENSGT00390000017595 ENSGT00940000157720 ENSGT00940000155595 ENSGT00780000122010 ENSGT00940000157520 ENSGT00940000158935 ENSGT00530000063672.a ENSGT00520000055589.c Cebidae ANCESTRAL SPECIES 17 ENSGT00390000013594 ENSGT00940000154939 ENSGT00940000153335.a.b.w.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.s.a ENSGT00940000158210 ENSGT00940000158794 ENSGT00940000154257.j ##22 ENSGT00940000160543 ENSGT01030000234543.B.f ENSGT00940000159378 ENSGT00940000159406 ENSGT00940000158924 ENSGT00940000153441.a.b ENSGT00940000161556 ENSGT00390000017595 ENSGT00940000157720 ENSGT00940000155595 ENSGT00780000122010 ENSGT00940000157520 ENSGT00940000158935 ENSGT00530000063672.a ENSGT00520000055589.c Cebidae_a ANCESTRAL SPECIES 62 ENSGT00390000013594 ENSGT00940000154939 ENSGT00940000153335.a.b.w.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.s.a.c ENSGT00940000158210 ENSGT00940000158794 ENSGT00940000154257.j ##22 ENSGT00940000160543 ENSGT01030000234543.B.f ENSGT00940000159378 ENSGT00940000159406 ENSGT00940000158924 ENSGT00940000153441.a.b ENSGT00940000161556 ENSGT00390000017595 ENSGT00940000157720 ENSGT00940000155595 ENSGT00780000122010 ENSGT00940000157520 ENSGT00940000158935 ENSGT00530000063672.a ENSGT00520000055589.c Capuchin MODERN SPECIES 736 ENSCCAG00000028366 ##22 Bolivian squirrel monkey MODERN SPECIES 72 ENSSBOG00000027080 RHOBTB1 (ENSSBOG00000029546) TMEM26 (ENSSBOG00000035881) CABCOCO1 (ENSSBOG00000021773) ENSSBOG00000027635 ARID5B (ENSSBOG00000018993) RTKN2 (ENSSBOG00000030275) ZNF365 (ENSSBOG00000031164) ENSSBOG00000032292 ENSSBOG00000022571 ADO (ENSSBOG00000019132) EGR2 (ENSSBOG00000024516) ENSSBOG00000028523 JMJD1C (ENSSBOG00000030112) REEP3 (ENSSBOG00000027338) ENSSBOG00000021789 ##22 LRRTM3 (ENSSBOG00000035483) CTNNA3 (ENSSBOG00000029109) DNAJC12 (ENSSBOG00000016625) ENSSBOG00000019127 SIRT1 (ENSSBOG00000034094) HERC4 (ENSSBOG00000025636) MYPN (ENSSBOG00000033391) ATOH7 (ENSSBOG00000029750) PBLD (ENSSBOG00000032895) HNRNPH3 (ENSSBOG00000022722) RUFY2 (ENSSBOG00000026822) DNA2 (ENSSBOG00000026235) ENSSBOG00000030450 ENSSBOG00000032367 TET1 (ENSSBOG00000033648) Catarrhini ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Pan ANCESTRAL SPECIES 26 ENSGT00390000006684 ENSGT00390000004524.c.a.a.a.a.a.b ENSGT00940000156806 ENSGT00410000025802.g.a.n ENSGT00940000153558.b.i.a ENSGT00940000155007.k ENSGT00940000155244 ENSGT00530000064269 ENSGT00450000040296 ENSGT00550000074817.e.a.a ENSGT00940000156325 ENSGT00940000159054.g ENSGT00940000157242 ENSGT00390000018619 ENSGT00530000064313.b.k ENSGT00940000154257.j ##22 ENSGT00940000155819.c.a.b ENSGT00940000163053.a ENSGT01050000244883.A.a.a.a.a.d.d.b ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00940000154156.d.n.b.a.a.b ENSGT00390000008092.a.l ENSGT00940000154046.b ENSGT00390000002416 ENSGT00940000161008 ENSGT00390000000945 ENSGT00390000000860.b ENSGT00940000156436 ENSGT00390000001413 Bonobo MODERN SPECIES 22 TMEM215 (ENSPPAG00000007092) ENSPPAG00000030062 APTX (ENSPPAG00000030295) ENSPPAG00000043485 DNAJA1 (ENSPPAG00000027533) SMU1 (ENSPPAG00000032159) B4GALT1 (ENSPPAG00000038905) ENSPPAG00000023247 BAG1 (ENSPPAG00000027764) CHMP5 (ENSPPAG00000034164) NFX1 (ENSPPAG00000027871) ENSPPAG00000002141 AQP3 (ENSPPAG00000042338) NOL6 (ENSPPAG00000040840) ENSPPAG00000024464 ENSPPAG00000037329 ##22 ENSPPAG00000011749 ENSPPAG00000039531 PRSS3 (ENSPPAG00000034435) ENSPPAG00000038935 UBAP2 (ENSPPAG00000039935) DCAF12 (ENSPPAG00000002963) ENSPPAG00000038439 UBAP1 (ENSPPAG00000030115) KIF24 (ENSPPAG00000027850) NUDT2 (ENSPPAG00000037454) MYORG (ENSPPAG00000021000) C9orf24 (ENSPPAG00000031818) FAM219A (ENSPPAG00000043868) DNAI1 (ENSPPAG00000042923) ENHO (ENSPPAG00000022923) Chimpanzee MODERN SPECIES 22 ENSPTRG00000049671 APTX (ENSPTRG00000020850) ENSPTRG00000038934 DNAJA1 (ENSPTRG00000020852) SMU1 (ENSPTRG00000020853) B4GALT1 (ENSPTRG00000020854) SPINK4 (ENSPTRG00000020855) BAG1 (ENSPTRG00000020856) CHMP5 (ENSPTRG00000020857) NFX1 (ENSPTRG00000020858) AQP7 (ENSPTRG00000052141) AQP3 (ENSPTRG00000020860) NOL6 (ENSPTRG00000020861) ANKRD18B (ENSPTRG00000020960) ENSPTRG00000029293 ENSPTRG00000020865 ##22 ENSPTRG00000045087 ENSPTRG00000050684 PRSS3 (ENSPTRG00000049562) UBE2R2 (ENSPTRG00000020870) UBAP2 (ENSPTRG00000020871) DCAF12 (ENSPTRG00000020872) ENSPTRG00000052569 UBAP1 (ENSPTRG00000020873) KIF24 (ENSPTRG00000020874) NUDT2 (ENSPTRG00000020876) MYORG (ENSPTRG00000020877) C9H9orf24 (ENSPTRG00000020878) FAM219A (ENSPTRG00000020879) DNAI1 (ENSPTRG00000020880) ENHO (ENSPTRG00000050140) Orangutan MODERN SPECIES 1 RHOBTB1 (ENSPPYG00000002420) TMEM26 (ENSPPYG00000002419) CABCOCO1 (ENSPPYG00000002418) ARID5B (ENSPPYG00000002417) RTKN2 (ENSPPYG00000002416) ZNF365 (ENSPPYG00000002415) ENSPPYG00000002414 ADO (ENSPPYG00000002413) EGR2 (ENSPPYG00000002412) NRBF2 (ENSPPYG00000002411) ENSPPYG00000035029 JMJD1C (ENSPPYG00000002410) REEP3 (ENSPPYG00000035618) ENSPPYG00000030513 ENSPPYG00000040675 ENSPPYG00000002406 ##22 LRRTM3 (ENSPPYG00000002405) CTNNA3 (ENSPPYG00000002404) DNAJC12 (ENSPPYG00000002402) SIRT1 (ENSPPYG00000002401) HERC4 (ENSPPYG00000002400) MYPN (ENSPPYG00000002399) ATOH7 (ENSPPYG00000030559) PBLD (ENSPPYG00000002398) HNRNPH3 (ENSPPYG00000002397) RUFY2 (ENSPPYG00000002396) DNA2 (ENSPPYG00000002395) SLC25A16 (ENSPPYG00000002394) TET1 (ENSPPYG00000002393) CCAR1 (ENSPPYG00000002392) STOX1 (ENSPPYG00000002391) Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Lemuriformes ANCESTRAL SPECIES 8 ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Greater bamboo lemur MODERN SPECIES 100 ENSPSMG00000018733 #18 VPS13C (ENSPSMG00000019390) #19 RORA (ENSPSMG00000019899) #20 ICE2 (ENSPSMG00000019964) #21 ANXA2 (ENSPSMG00000019989) ##22 FOXB1 (ENSPSMG00000019998) #23 BNIP2 (ENSPSMG00000020023) #24 GTF2A2 (ENSPSMG00000020045) #25 GCNT3 (ENSPSMG00000020054) #26 FAM81A (ENSPSMG00000020067) #28 ENSPSMG00000020076 MYO1E (ENSPSMG00000020103) #30 CCNB2 (ENSPSMG00000020142) #32 RNF111 (ENSPSMG00000020183) #33 SLTM (ENSPSMG00000020294) #34 MINDY2 (ENSPSMG00000020335) #36 ENSPSMG00000020351 ADAM10 (ENSPSMG00000020455) #37 LIPC (ENSPSMG00000020516) AQP9 (ENSPSMG00000020531) Coquerels sifaka MODERN SPECIES 453 ENSPCOG00000017538 ENSPCOG00000014697 GSAP (ENSPCOG00000022029) CCDC146 (ENSPCOG00000015262) FGL2 (ENSPCOG00000022237) FAM185A (ENSPCOG00000026467) FBXL13 (ENSPCOG00000013424) LRRC17 (ENSPCOG00000023978) ARMC10 (ENSPCOG00000018080) NAPEPLD (ENSPCOG00000015964) PMPCB (ENSPCOG00000017770) DNAJC2 (ENSPCOG00000021154) ENSPCOG00000009801 SLC26A5 (ENSPCOG00000017969) RELN (ENSPCOG00000024626) ENSPCOG00000027019 ##22 ORC5 (ENSPCOG00000028532) LHFPL3 (ENSPCOG00000017794) KMT2E (ENSPCOG00000018663) SRPK2 (ENSPCOG00000024963) PUS7 (ENSPCOG00000027014) RINT1 (ENSPCOG00000017061) ENSPCOG00000027009 ATXN7L1 (ENSPCOG00000014848) ENSPCOG00000014895 CDHR3 (ENSPCOG00000021004) ENSPCOG00000023173 SYPL1 (ENSPCOG00000015334) NAMPT (ENSPCOG00000021607) ENSPCOG00000024777 PIK3CG (ENSPCOG00000019696) Mouse lemur MODERN SPECIES 22 FBXL22 (ENSMICG00000007146) ENSMICG00000034930 USP3 (ENSMICG00000007133) CA12 (ENSMICG00000007123) APH1B (ENSMICG00000007117) #10 RAB8B (ENSMICG00000043942) #11 ENSMICG00000007109 LACTB (ENSMICG00000007103) #13 TPM1 (ENSMICG00000028096) #14 TLN2 (ENSMICG00000002620) #16 ENSMICG00000032839 #18 ENSMICG00000042306 VPS13C (ENSMICG00000015617) #19 RORA (ENSMICG00000010861) #20 ICE2 (ENSMICG00000043974) #21 ANXA2 (ENSMICG00000017701) ##22 FOXB1 (ENSMICG00000017700) #23 BNIP2 (ENSMICG00000011145) #24 ENSMICG00000031559 #25 FAM81A (ENSMICG00000011130) #28 MYO1E (ENSMICG00000011619) #30 CCNB2 (ENSMICG00000011608) #32 RNF111 (ENSMICG00000036162) #33 SLTM (ENSMICG00000013069) #34 MINDY2 (ENSMICG00000038206) #36 ADAM10 (ENSMICG00000005882) #37 LIPC (ENSMICG00000005871) ENSMICG00000038169 ALDH1A2 (ENSMICG00000006105) AQP9 (ENSMICG00000038252) POLR2M (ENSMICG00000047017) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Glires ANCESTRAL SPECIES 15 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Lagomorpha ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Pika MODERN SPECIES 6037 ENSOPRG00000014487 ##22 Rodentia ANCESTRAL SPECIES 3 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00900000143658 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00940000163765 #18 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00960000192699 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Kangaroo rat MODERN SPECIES 330 Ciao2a (ENSDORG00000026286) ENSDORG00000012436 Herc1 (ENSDORG00000016189) Fbxl22 (ENSDORG00000027356) Usp3 (ENSDORG00000016188) Car12 (ENSDORG00000012363) ENSDORG00000012361 #10 Rab8b (ENSDORG00000023189) #11 ENSDORG00000007575 #12 Lactb (ENSDORG00000028713) #13 Tpm1 (ENSDORG00000002438) #14 Tln2 (ENSDORG00000001561) #16 Vps13c (ENSDORG00000005969) #19 Rora (ENSDORG00000001826) #20 ENSDORG00000001443 #21 Anxa2 (ENSDORG00000015726) ##22 ENSDORG00000024092 Foxb1 (ENSDORG00000027835) #23 ENSDORG00000029842 Bnip2 (ENSDORG00000009318) #24 Gtf2a2 (ENSDORG00000007867) #25 Gcnt3 (ENSDORG00000005165) #26 ENSDORG00000008945 #28 Myo1e (ENSDORG00000008506) #30 Ccnb2 (ENSDORG00000006944) #32 Rnf111 (ENSDORG00000006942) #33 Sltm (ENSDORG00000007463) #34 Mindy2 (ENSDORG00000007461) #36 Adam10 (ENSDORG00000007459) #37 Aqp9 (ENSDORG00000007593) Aldh1a2 (ENSDORG00000011893) Myomorpha ANCESTRAL SPECIES 25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Muroidea ANCESTRAL SPECIES 23 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Upper Galilee mountains blind mole rat MODERN SPECIES 972 Rora (ENSNGAG00000001226) #20 Ice2 (ENSNGAG00000000786) #21 Anxa2 (ENSNGAG00000019852) ##22 Foxb1 (ENSNGAG00000019195) #23 Bnip2 (ENSNGAG00000013361) #24 ENSNGAG00000006170 #25 Gcnt3 (ENSNGAG00000016220) #26 ENSNGAG00000002054 #28 Myo1e (ENSNGAG00000000794) #30 Ccnb2 (ENSNGAG00000009381) #32 Rnf111 (ENSNGAG00000002795) #33 Sltm (ENSNGAG00000012328) #34 Mindy2 (ENSNGAG00000003074) #36 Adam10 (ENSNGAG00000014635) #37 Lipc (ENSNGAG00000010841) Muroidea_A ANCESTRAL SPECIES 6 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Murinae ANCESTRAL SPECIES 3 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Rat DUPLICATION Rat MODERN SPECIES 6 C15h8orf74 (ENSRNOG00000012402) Rp1l1 (ENSRNOG00000046326) Prss55 (ENSRNOG00000047258) Prss51 (ENSRNOG00000047637) Prss52 (ENSRNOG00000047632) Msra (ENSRNOG00000012440) Kif13b (ENSRNOG00000013089) Hmbox1 (ENSRNOG00000013326) Ints9 (ENSRNOG00000013459) Extl3 (ENSRNOG00000013581) Fzd3 (ENSRNOG00000047211) Fbxo16 (ENSRNOG00000014003) Zfp395 (ENSRNOG00000014191) Pnoc (ENSRNOG00000014231) Elp3 (ENSRNOG00000014291) AABR07018244.2 (ENSRNOG00000058011) ##22 AABR07018244.1 (ENSRNOG00000048585) Nuggc (ENSRNOG00000018238) Scara5 (ENSRNOG00000014398) Pbk (ENSRNOG00000015308) Esco2 (ENSRNOG00000015921) Ccdc25 (ENSRNOG00000015939) Scara3 (ENSRNOG00000016177) Clu (ENSRNOG00000016460) Gulo (ENSRNOG00000016648) Adam2 (ENSRNOG00000017027) Ephx2 (ENSRNOG00000017286) Chrna2 (ENSRNOG00000017424) Ptk2b (ENSRNOG00000027839) Trim35 (ENSRNOG00000009449) Stmn4 (ENSRNOG00000053334) Rat MODERN SPECIES 18 Usp3 (ENSRNOG00000017714) Car12 (ENSRNOG00000017766) LOC691658 (ENSRNOG00000063302) #10 LOC120094192 (ENSRNOG00000067077) #10 Aph1b (ENSRNOG00000027295) #10 Rab8b (ENSRNOG00000018009) #11 Rps27l (ENSRNOG00000050473) #12 Lactb (ENSRNOG00000018081) #13 Tpm1 (ENSRNOG00000018184) #14 Tln2 (ENSRNOG00000018373) #16 C2cd4b (ENSRNOG00000065921) C2cd4a (ENSRNOG00000034236) Vps13c (ENSRNOG00000030213) #19 Rora (ENSRNOG00000027145) #20 Ice2 (ENSRNOG00000010160) #21 Anxa2 (ENSRNOG00000010362) ##22 Foxb1 (ENSRNOG00000068150) Bnip2 (ENSRNOG00000056024) #24 LOC103695118 (ENSRNOG00000056701) #25 Gcnt3 (ENSRNOG00000059540) #26 Fam81a (ENSRNOG00000057501) #28 Myo1e (ENSRNOG00000061928) #30 ENSRNOG00000071086 Ccnb2 (ENSRNOG00000063216) #32 Rnf111 (ENSRNOG00000060750) #33 Sltm (ENSRNOG00000054446) #34 Mindy2 (ENSRNOG00000061337) #36 AABR07070609.1 (ENSRNOG00000061240) Adam10 (ENSRNOG00000054257) #37 Lipc (ENSRNOG00000060338) AABR07038881.1 (ENSRNOG00000038181) Mus ANCESTRAL SPECIES 4 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #10 ENSGT00390000002049.c.b.u.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Shrew mouse MODERN SPECIES 1 Fbxl22 (MGP_PahariEiJ_G0015244) Usp3 (MGP_PahariEiJ_G0015245) Car12 (MGP_PahariEiJ_G0015246) Aph1b (MGP_PahariEiJ_G0015247) #10 MGP_PahariEiJ_G0015248 #10 Rab8b (MGP_PahariEiJ_G0015249) #11 MGP_PahariEiJ_G0015250 #12 Lactb (MGP_PahariEiJ_G0015251) #13 MGP_PahariEiJ_G0015252 #14 Tln2 (MGP_PahariEiJ_G0015253) #16 C2cd4b (MGP_PahariEiJ_G0015254) C2cd4a (MGP_PahariEiJ_G0015255) Vps13c (MGP_PahariEiJ_G0015256) #19 Rora (MGP_PahariEiJ_G0015257) #20 Ice2 (MGP_PahariEiJ_G0015258) #21 Anxa2 (MGP_PahariEiJ_G0015259) ##22 Foxb1 (MGP_PahariEiJ_G0015260) #23 Bnip2 (MGP_PahariEiJ_G0015261) #24 Gtf2a2 (MGP_PahariEiJ_G0015262) #25 Gcnt3 (MGP_PahariEiJ_G0015263) #26 Fam81a (MGP_PahariEiJ_G0015264) #28 Myo1e (MGP_PahariEiJ_G0015265) #30 Ccnb2 (MGP_PahariEiJ_G0015266) #32 Rnf111 (MGP_PahariEiJ_G0015267) #33 Sltm (MGP_PahariEiJ_G0015268) #34 Mindy2 (MGP_PahariEiJ_G0015269) #36 MGP_PahariEiJ_G0015270 Adam10 (MGP_PahariEiJ_G0015271) #37 Lipc (MGP_PahariEiJ_G0015272) MGP_PahariEiJ_G0015273 Aldh1a2 (MGP_PahariEiJ_G0015274) Mus_A ANCESTRAL SPECIES 4 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #10 ENSGT00390000002049.c.b.u.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Ryukyu mouse MODERN SPECIES 18 Fbxl22 (MGP_CAROLIEiJ_G0032379) Usp3 (MGP_CAROLIEiJ_G0032380) Car12 (MGP_CAROLIEiJ_G0032381) Aph1b (MGP_CAROLIEiJ_G0032382) #10 MGP_CAROLIEiJ_G0032383 MGP_CAROLIEiJ_G0032384 #10 Rab8b (MGP_CAROLIEiJ_G0032385) #11 Lactb (MGP_CAROLIEiJ_G0032387) #13 Tpm1 (MGP_CAROLIEiJ_G0032388) #14 Tln2 (MGP_CAROLIEiJ_G0032389) #16 C2cd4b (MGP_CAROLIEiJ_G0032390) C2cd4a (MGP_CAROLIEiJ_G0032391) Vps13c (MGP_CAROLIEiJ_G0032392) #19 Rora (MGP_CAROLIEiJ_G0032393) #20 Ice2 (MGP_CAROLIEiJ_G0032394) #21 Anxa2 (MGP_CAROLIEiJ_G0032395) ##22 Foxb1 (MGP_CAROLIEiJ_G0032396) #23 Bnip2 (MGP_CAROLIEiJ_G0032397) #24 Gtf2a2 (MGP_CAROLIEiJ_G0032398) #25 Gcnt3 (MGP_CAROLIEiJ_G0032399) #26 Fam81a (MGP_CAROLIEiJ_G0032400) #28 Myo1e (MGP_CAROLIEiJ_G0032401) #30 Ccnb2 (MGP_CAROLIEiJ_G0032402) #32 Rnf111 (MGP_CAROLIEiJ_G0032403) #33 Sltm (MGP_CAROLIEiJ_G0032404) #34 Mindy2 (MGP_CAROLIEiJ_G0032405) #36 MGP_CAROLIEiJ_G0032406 Adam10 (MGP_CAROLIEiJ_G0032407) #37 Lipc (MGP_CAROLIEiJ_G0032408) Aqp9 (MGP_CAROLIEiJ_G0032409) Aldh1a2 (MGP_CAROLIEiJ_G0032410) Mus_B ANCESTRAL SPECIES 3 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #10 ENSGT00390000002049.c.b.u.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Mouse MODERN SPECIES 18 Fbxl22 (ENSMUSG00000050503) Usp3 (ENSMUSG00000032376) Car12 (ENSMUSG00000032373) Aph1b (ENSMUSG00000032375) #10 Aph1c (ENSMUSG00000053040) #10 Rab8b (ENSMUSG00000036943) #11 Rps27l (ENSMUSG00000036781) #12 Lactb (ENSMUSG00000032370) #13 Tpm1 (ENSMUSG00000032366) #14 Tln2 (ENSMUSG00000052698) #16 C2cd4b (ENSMUSG00000091956) C2cd4a (ENSMUSG00000047990) Vps13c (ENSMUSG00000035284) #19 Rora (ENSMUSG00000032238) #20 Ice2 (ENSMUSG00000032235) #21 Anxa2 (ENSMUSG00000032231) ##22 Foxb1 (ENSMUSG00000059246) #23 Bnip2 (ENSMUSG00000011958) #24 Gtf2a2 (ENSMUSG00000033543) #25 Gcnt3 (ENSMUSG00000032226) #26 Fam81a (ENSMUSG00000032224) #28 Myo1e (ENSMUSG00000032220) #30 Ccnb2 (ENSMUSG00000032218) #32 Rnf111 (ENSMUSG00000032217) #33 Sltm (ENSMUSG00000032212) #34 Mindy2 (ENSMUSG00000042444) #36 Adam10 (ENSMUSG00000054693) #37 Lipc (ENSMUSG00000032207) Aqp9 (ENSMUSG00000032204) Aldh1a2 (ENSMUSG00000013584) Polr2m (ENSMUSG00000032199) Mus_C ANCESTRAL SPECIES 8 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #10 ENSGT00390000002049.c.b.u.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Steppe mouse MODERN SPECIES 3341 Car12 (ENSMSIG00000022296) ENSMSIG00000022339 #10 ENSMSIG00000022353 Aph1c (ENSMSIG00000022355) #10 Rab8b (ENSMSIG00000022369) #11 ENSMSIG00000022374 #12 Lactb (ENSMSIG00000022397) #13 Tpm1 (ENSMSIG00000022438) #14 ENSMSIG00000023676 Tln2 (ENSMSIG00000023708) #16 C2cd4b (ENSMSIG00000023890) C2cd4a (ENSMSIG00000023906) Vps13c (ENSMSIG00000023921) #19 Rora (ENSMSIG00000024229) #20 Ice2 (ENSMSIG00000024296) #21 ENSMSIG00000024328 ##22 ENSMSIG00000024362 Foxb1 (ENSMSIG00000024373) #23 Bnip2 (ENSMSIG00000024382) #24 Gtf2a2 (ENSMSIG00000024440) #25 Gcnt3 (ENSMSIG00000024447) #26 Fam81a (ENSMSIG00000024458) #28 Myo1e (ENSMSIG00000024480) #30 Ccnb2 (ENSMSIG00000024583) #32 Rnf111 (ENSMSIG00000024613) #33 Sltm (ENSMSIG00000024797) #34 ENSMSIG00000024868 Mindy2 (ENSMSIG00000024872) #36 ENSMSIG00000024899 Adam10 (ENSMSIG00000024905) #37 Lipc (ENSMSIG00000024928) spretus MODERN SPECIES 18 Fbxl22 (MGP_SPRETEiJ_G0033518) Usp3 (MGP_SPRETEiJ_G0033519) Car12 (MGP_SPRETEiJ_G0033520) Aph1b (MGP_SPRETEiJ_G0033521) #10 Aph1c (MGP_SPRETEiJ_G0033522) #10 Rab8b (MGP_SPRETEiJ_G0033523) #11 Rps27l (MGP_SPRETEiJ_G0033524) #12 Lactb (MGP_SPRETEiJ_G0033525) #13 Tpm1 (MGP_SPRETEiJ_G0033526) #14 Tln2 (MGP_SPRETEiJ_G0033527) #16 MGP_SPRETEiJ_G0033528 C2cd4a (MGP_SPRETEiJ_G0033529) Vps13c (MGP_SPRETEiJ_G0033530) #19 Rora (MGP_SPRETEiJ_G0033531) #20 Ice2 (MGP_SPRETEiJ_G0033532) #21 Anxa2 (MGP_SPRETEiJ_G0033533) ##22 Foxb1 (MGP_SPRETEiJ_G0033534) #23 Bnip2 (MGP_SPRETEiJ_G0033535) #24 Gtf2a2 (MGP_SPRETEiJ_G0033536) #25 Gcnt3 (MGP_SPRETEiJ_G0033537) #26 Fam81a (MGP_SPRETEiJ_G0033538) #28 Myo1e (MGP_SPRETEiJ_G0033539) #30 Ccnb2 (MGP_SPRETEiJ_G0033540) #32 Rnf111 (MGP_SPRETEiJ_G0033541) #33 Sltm (MGP_SPRETEiJ_G0033542) #34 Mindy2 (MGP_SPRETEiJ_G0033543) #36 MGP_SPRETEiJ_G0033544 Adam10 (MGP_SPRETEiJ_G0033545) #37 Lipc (MGP_SPRETEiJ_G0033546) Aqp9 (MGP_SPRETEiJ_G0033547) Aldh1a2 (MGP_SPRETEiJ_G0033548) Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579.c #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00520000062301 ENSGT00940000160579.c #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Prairie vole MODERN SPECIES 13 Usp3 (ENSMOCG00000016014) Car12 (ENSMOCG00000011104) ENSMOCG00000006287 #10 ENSMOCG00000012775 #11 ENSMOCG00000002090 Rps27l (ENSMOCG00000000754) #12 Lactb (ENSMOCG00000022545) #13 Tpm1 (ENSMOCG00000021399) #14 ENSMOCG00000001381 #16 ENSMOCG00000012230 #16 ENSMOCG00000002742 C2cd4a (ENSMOCG00000002214) Vps13c (ENSMOCG00000000853) #19 Rora (ENSMOCG00000016886) #20 Ice2 (ENSMOCG00000000614) #21 Anxa2 (ENSMOCG00000003789) ##22 Foxb1 (ENSMOCG00000003704) #23 Bnip2 (ENSMOCG00000021145) #24 Gtf2a2 (ENSMOCG00000012789) #25 Gcnt3 (ENSMOCG00000000478) #26 Fam81a (ENSMOCG00000021727) #28 Myo1e (ENSMOCG00000013989) #30 Ccnb2 (ENSMOCG00000014442) #32 Rnf111 (ENSMOCG00000002746) #33 Sltm (ENSMOCG00000012419) #34 Mindy2 (ENSMOCG00000007504) #36 Adam10 (ENSMOCG00000016984) #37 Lipc (ENSMOCG00000021852) Aqp9 (ENSMOCG00000019598) Aldh1a2 (ENSMOCG00000015827) ENSMOCG00000008322 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 16 Phtf2 (ENSPEMG00000019957) Magi2 (ENSPEMG00000019437) ENSPEMG00000027276 Sema3d (ENSPEMG00000001820) Sema3a (ENSPEMG00000000566) Sema3e (ENSPEMG00000020006) Pclo (ENSPEMG00000008368) ENSPEMG00000025835 Cacna2d1 (ENSPEMG00000019975) Hgf (ENSPEMG00000007344) Sema3c (ENSPEMG00000019672) Cd36 (ENSPEMG00000019565) Gnat3 (ENSPEMG00000019440) Gnai1 (ENSPEMG00000019425) ENSPEMG00000023262 ENSPEMG00000014699 ##22 Zfp800 (ENSPEMG00000011805) Gcc1 (ENSPEMG00000031326) Arf5 (ENSPEMG00000021476) Fscn3 (ENSPEMG00000021632) Pax4 (ENSPEMG00000008639) Snd1 (ENSPEMG00000010240) Lrrc4 (ENSPEMG00000011142) Lep (ENSPEMG00000022204) Rbm28 (ENSPEMG00000020673) Prrt4 (ENSPEMG00000016516) Impdh1 (ENSPEMG00000014779) Hilpda (ENSPEMG00000027655) Garin1b (ENSPEMG00000020844) Calu (ENSPEMG00000000768) Opn1sw (ENSPEMG00000013155) Northern American deer mouse MODERN SPECIES 20 ENSPEMG00000020385 #10 Rab8b (ENSPEMG00000022284) #11 ENSPEMG00000022063 #12 Lactb (ENSPEMG00000021795) #13 Gm6525 (ENSPEMG00000024538) Tpm1 (ENSPEMG00000020869) #14 ENSPEMG00000025721 ENSPEMG00000024299 Tln2 (ENSPEMG00000021042) #16 ENSPEMG00000031152 C2cd4b (ENSPEMG00000016908) C2cd4a (ENSPEMG00000013754) Vps13c (ENSPEMG00000016724) #19 Rora (ENSPEMG00000021178) #20 Ice2 (ENSPEMG00000023148) #21 Anxa2 (ENSPEMG00000020921) ##22 Foxb1 (ENSPEMG00000026372) #23 Bnip2 (ENSPEMG00000008159) #24 Gtf2a2 (ENSPEMG00000012295) #25 Gcnt3 (ENSPEMG00000009036) #26 ENSPEMG00000026494 Fam81a (ENSPEMG00000020609) #28 Myo1e (ENSPEMG00000020628) #30 Ccnb2 (ENSPEMG00000010693) #32 Rnf111 (ENSPEMG00000011827) #33 Sltm (ENSPEMG00000013263) #34 Mindy2 (ENSPEMG00000030187) #36 ENSPEMG00000028321 Adam10 (ENSPEMG00000023786) #37 Lipc (ENSPEMG00000021222) Aqp9 (ENSPEMG00000020420) Cricetinae ANCESTRAL SPECIES 6 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.j ##22 ENSGT00390000003710.c.a.b.a.b ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572.nd #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579.c #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 Golden Hamster MODERN SPECIES 672 Herc1 (ENSMAUG00000020600) Fbxl22 (ENSMAUG00000000756) Usp3 (ENSMAUG00000014840) Car12 (ENSMAUG00000010842) ENSMAUG00000020850 #10 Rab8b (ENSMAUG00000014611) #11 Rps27l (ENSMAUG00000014151) #12 Lactb (ENSMAUG00000000691) #13 Tpm1 (ENSMAUG00000015731) #14 Tln2 (ENSMAUG00000011104) #16 C2cd4b (ENSMAUG00000011284) C2cd4a (ENSMAUG00000001316) Vps13c (ENSMAUG00000013205) #19 Rora (ENSMAUG00000018718) #20 Ice2 (ENSMAUG00000013954) #21 Anxa2 (ENSMAUG00000018332) ##22 ENSMAUG00000004371 ENSMAUG00000008646 Foxb1 (ENSMAUG00000020300) #23 Bnip2 (ENSMAUG00000002456) #24 ENSMAUG00000018634 #25 Gcnt3 (ENSMAUG00000005994) #26 Fam81a (ENSMAUG00000020147) #28 ENSMAUG00000008961 #30 ENSMAUG00000008399 #30 Ccnb2 (ENSMAUG00000017817) #32 Rnf111 (ENSMAUG00000012803) #33 Sltm (ENSMAUG00000014391) #34 Mindy2 (ENSMAUG00000022175) #36 Adam10 (ENSMAUG00000014886) #37 Lipc (ENSMAUG00000013594) Chinese hamster chok1gshd MODERN SPECIES 284 Fbxl22 (ENSCGRG00001012979) Usp3 (ENSCGRG00001012692) Car12 (ENSCGRG00001005768) ENSCGRG00001019290 #10 ENSCGRG00001018389 #10 Rab8b (ENSCGRG00001023679) #11 Rps27l (ENSCGRG00001020737) #12 Lactb (ENSCGRG00001017416) #13 Tpm1 (ENSCGRG00001021042) #14 Tln2 (ENSCGRG00001010300) #16 C2cd4b (ENSCGRG00001010530) C2cd4a (ENSCGRG00001012662) Vps13c (ENSCGRG00001011049) #19 Rora (ENSCGRG00001017588) #20 Ice2 (ENSCGRG00001014356) #21 Anxa2 (ENSCGRG00001011233) ##22 ENSCGRG00001011336 Foxb1 (ENSCGRG00001010230) #23 Bnip2 (ENSCGRG00001022198) #24 ENSCGRG00001010848 #25 Gcnt3 (ENSCGRG00001010296) #26 Fam81a (ENSCGRG00001023777) #28 Myo1e (ENSCGRG00001015678) #30 Ccnb2 (ENSCGRG00001015914) #32 Rnf111 (ENSCGRG00001012805) #33 Sltm (ENSCGRG00001022009) #34 ENSCGRG00001005799 Mindy2 (ENSCGRG00001009624) #36 Adam10 (ENSCGRG00001024542) #37 ENSCGRG00001006102 #37 Lipc (ENSCGRG00001023377) Rodentia_A ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000042098 ASPRV1 (ENSHGLG00000050430) MXD1 (ENSHGLG00000010162) SNRNP27 (ENSHGLG00000043551) ENSHGLG00000004160 ANXA4 (ENSHGLG00000004505) ENSHGLG00000017539 AAK1 (ENSHGLG00000019132) NFU1 (ENSHGLG00000014360) GFPT1 (ENSHGLG00000010905) ANTXR1 (ENSHGLG00000008690) GKN1 (ENSHGLG00000009024) GKN2 (ENSHGLG00000009365) ENSHGLG00000009990 BMP10 (ENSHGLG00000036573) ENSHGLG00000032377 ##22 ARHGAP25 (ENSHGLG00000018071) ENSHGLG00000018073 PROKR1 (ENSHGLG00000034888) ENSHGLG00000005135 APLF (ENSHGLG00000042896) FBXO48 (ENSHGLG00000044023) ENSHGLG00000000426 PLEK (ENSHGLG00000019154) CNRIP1 (ENSHGLG00000045252) ENSHGLG00000047583 PPP3R1 (ENSHGLG00000044041) PNO1 (ENSHGLG00000045522) DNAAF10 (ENSHGLG00000012153) ENSHGLG00000012332 ETAA1 (ENSHGLG00000040625) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154257.j ##22 Degu MODERN SPECIES 43 ENSODEG00000014492 NR2F2 (ENSODEG00000014227) MCTP2 (ENSODEG00000016400) RGMA (ENSODEG00000014943) CHD2 (ENSODEG00000016028) ENSODEG00000014647 FAM174B (ENSODEG00000015105) ENSODEG00000014949 ENSODEG00000014171 ST8SIA2 (ENSODEG00000014941) SLCO3A1 (ENSODEG00000014776) SV2B (ENSODEG00000014483) ENSODEG00000014809 KLHL25 (ENSODEG00000020418) AGBL1 (ENSODEG00000015086) ENSODEG00000015306 ##22 NTRK3 (ENSODEG00000014845) MRPL46 (ENSODEG00000015622) MRPS11 (ENSODEG00000014618) ENSODEG00000020339 DET1 (ENSODEG00000015080) ENSODEG00000015278 ISG20 (ENSODEG00000015032) ENSODEG00000015131 HAPLN3 (ENSODEG00000014578) MFGE8 (ENSODEG00000014861) ABHD2 (ENSODEG00000015473) RLBP1 (ENSODEG00000014477) FANCI (ENSODEG00000016230) ENSODEG00000015280 ENSODEG00000015778 Atlantogenata ANCESTRAL SPECIES 2 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D Xenarthra ANCESTRAL SPECIES 675 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 Sloth MODERN SPECIES 10558 ANXA2 (ENSCHOG00000012143) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1451 ENSDNOG00000035979 ENSDNOG00000017360 DCAF10 (ENSDNOG00000042170) ENSDNOG00000004272 EXOSC3 (ENSDNOG00000049791) TRMT10B (ENSDNOG00000024558) FRMPD1 (ENSDNOG00000042812) ENSDNOG00000035680 FBXO10 (ENSDNOG00000010283) POLR1E (ENSDNOG00000010257) ZBTB5 (ENSDNOG00000010253) GRHPR (ENSDNOG00000037952) ZCCHC7 (ENSDNOG00000004148) ENSDNOG00000038694 PAX5 (ENSDNOG00000035956) ENSDNOG00000048444 #22 MELK (ENSDNOG00000010825) RNF38 (ENSDNOG00000016606) GNE (ENSDNOG00000008983) ENSDNOG00000041862 CLTA (ENSDNOG00000045918) CCIN (ENSDNOG00000008957) ENSDNOG00000008950 RECK (ENSDNOG00000008915) ENSDNOG00000045255 ENSDNOG00000038762 ENSDNOG00000039126 ENSDNOG00000044270 ENSDNOG00000038054 OR2S2 (ENSDNOG00000031555) SPAAR (ENSDNOG00000044089) Armadillo MODERN SPECIES 4551 RORA (ENSDNOG00000043276) #20 ENSDNOG00000017397 #21 ANXA2 (ENSDNOG00000004237) #22 FOXB1 (ENSDNOG00000023596) #23 BNIP2 (ENSDNOG00000045318) #24 GTF2A2 (ENSDNOG00000038655) #25 GCNT3 (ENSDNOG00000025952) #26 Afrotheria ANCESTRAL SPECIES 58 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A ENSGT00940000154489.A Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00390000004985.b #28 ENSGT00940000157461 #30 ENSGT00940000155405 #32 ENSGT00940000157691 #33 ENSGT00940000156573 #34 ENSGT00390000016607.a #36 ENSGT00940000160579 #37 ENSGT00940000157602 ENSGT00940000160582 ENSGT00940000158898 ENSGT00950000183065.D ENSGT00950000183065.A ENSGT00940000154489.A Hyrax MODERN SPECIES 6170 ICE2 (ENSPCAG00000004826) #21 ANXA2 (ENSPCAG00000004752) #22 Elephant MODERN SPECIES 466 HERC1 (ENSLAFG00000004068) FBXL22 (ENSLAFG00000031273) USP3 (ENSLAFG00000004065) CA12 (ENSLAFG00000001773) APH1B (ENSLAFG00000001772) #10 RAB8B (ENSLAFG00000001771) #11 RPS27L (ENSLAFG00000015475) #12 LACTB (ENSLAFG00000015480) #13 TPM1 (ENSLAFG00000004960) #14 TLN2 (ENSLAFG00000000520) #16 ENSLAFG00000013413 ENSLAFG00000027908 #19 ENSLAFG00000012810 #19 RORA (ENSLAFG00000000577) #20 ICE2 (ENSLAFG00000017637) #21 ANXA2 (ENSLAFG00000011404) #22 BNIP2 (ENSLAFG00000014187) #24 GTF2A2 (ENSLAFG00000010773) #25 FAM81A (ENSLAFG00000014758) #28 MYO1E (ENSLAFG00000004825) #30 CCNB2 (ENSLAFG00000004822) #32 RNF111 (ENSLAFG00000004816) #33 SLTM (ENSLAFG00000017922) #34 MINDY2 (ENSLAFG00000026046) #36 ADAM10 (ENSLAFG00000003535) #37 LIPC (ENSLAFG00000003533) ENSLAFG00000028987 AQP9 (ENSLAFG00000012160) ALDH1A2 (ENSLAFG00000018094) POLR2M (ENSLAFG00000028328) MYZAP (ENSLAFG00000013840) Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.g #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348 Opossum MODERN SPECIES USP3 (ENSMODG00000011011) CA12 (ENSMODG00000011032) APH1B (ENSMODG00000038735) #10 RAB8B (ENSMODG00000011048) #11 ENSMODG00000011078 RPS27L (ENSMODG00000042701) #12 LACTB (ENSMODG00000011098) #13 TPM1 (ENSMODG00000039857) #14 TLN2 (ENSMODG00000011273) #16 ENSMODG00000011283 ENSMODG00000049046 ENSMODG00000024628 VPS13C (ENSMODG00000011326) #19 RORA (ENSMODG00000011532) #20 ICE2 (ENSMODG00000011568) #21 ANXA2 (ENSMODG00000011604) #22 FOXB1 (ENSMODG00000024647) #23 ENSMODG00000049423 BNIP2 (ENSMODG00000011629) #24 GTF2A2 (ENSMODG00000011636) #25 GCNT3 (ENSMODG00000024649) #26 ENSMODG00000037095 OTUD7A (ENSMODG00000011729) ENSMODG00000048736 ENSMODG00000047909 KLF13 (ENSMODG00000039665) TRPM1 (ENSMODG00000011776) ENSMODG00000011784 ENSMODG00000047395 ENSMODG00000011795 MPHOSPH10 (ENSMODG00000011803) Marsupialia_b ANCESTRAL SPECIES ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.g #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348 Tasmanian devil MODERN SPECIES 1 USP3 (ENSSHAG00000023305) ENSSHAG00000022554 CA12 (ENSSHAG00000017499) APH1B (ENSSHAG00000029286) #10 RAB8B (ENSSHAG00000024710) #11 ENSSHAG00000022073 #12 LACTB (ENSSHAG00000017142) #13 TPM1 (ENSSHAG00000020913) #14 TLN2 (ENSSHAG00000015834) #16 ENSSHAG00000025298 ENSSHAG00000022906 VPS13C (ENSSHAG00000012649) #19 RORA (ENSSHAG00000015734) #20 ENSSHAG00000027451 ICE2 (ENSSHAG00000015473) #21 ANXA2 (ENSSHAG00000015232) #22 FOXB1 (ENSSHAG00000029618) #23 BNIP2 (ENSSHAG00000012090) #24 GTF2A2 (ENSSHAG00000031153) #25 ENSSHAG00000011674 #26 ENSSHAG00000026327 KLF13 (ENSSHAG00000032091) TRPM1 (ENSSHAG00000016828) MTMR10 (ENSSHAG00000016702) ENSSHAG00000016629 ENSSHAG00000016579 ENSSHAG00000029415 ENSSHAG00000015470 ENSSHAG00000028460 ENSSHAG00000025894 ENSSHAG00000012218 Diprotodontia ANCESTRAL SPECIES ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.g #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257.g #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348 koala MODERN SPECIES 183 CA12 (ENSPCIG00000003761) APH1B (ENSPCIG00000003765) #10 RAB8B (ENSPCIG00000003767) #11 ENSPCIG00000032134 #12 LACTB (ENSPCIG00000003775) #13 TPM1 (ENSPCIG00000003784) #14 TLN2 (ENSPCIG00000002281) #16 ENSPCIG00000033264 #16 ENSPCIG00000032015 VPS13C (ENSPCIG00000017458) #19 ENSPCIG00000025908 RORA (ENSPCIG00000013544) #20 ICE2 (ENSPCIG00000013541) #21 ENSPCIG00000013536 #22 FOXB1 (ENSPCIG00000013532) #23 BNIP2 (ENSPCIG00000023082) #24 GTF2A2 (ENSPCIG00000033224) #25 GCNT3 (ENSPCIG00000004630) #26 OTUD7A (ENSPCIG00000001985) KLF13 (ENSPCIG00000034957) TRPM1 (ENSPCIG00000027244) MTMR10 (ENSPCIG00000027284) FAN1 (ENSPCIG00000027285) MPHOSPH10 (ENSPCIG00000027286) MCEE (ENSPCIG00000027287) ENSPCIG00000027289 APBA2 (ENSPCIG00000027295) ENSPCIG00000027298 Common wonbat MODERN SPECIES 581 FBXL22 (ENSVURG00010016203) USP3 (ENSVURG00010016157) CA12 (ENSVURG00010016134) APH1B (ENSVURG00010016112) #10 RAB8B (ENSVURG00010016099) #11 ENSVURG00010016082 #12 LACTB (ENSVURG00010016066) #13 TPM1 (ENSVURG00010015990) #14 TLN2 (ENSVURG00010015950) #16 ENSVURG00010015922 ENSVURG00010015913 VPS13C (ENSVURG00010015870) #19 RORA (ENSVURG00010015835) #20 ENSVURG00010015814 ICE2 (ENSVURG00010015808) #21 ENSVURG00010015777 #22 FOXB1 (ENSVURG00010015763) #23 BNIP2 (ENSVURG00010015734) #24 GTF2A2 (ENSVURG00010015706) #25 GCNT3 (ENSVURG00010015692) #26 OTUD7A (ENSVURG00010015679) KLF13 (ENSVURG00010015669) TRPM1 (ENSVURG00010015575) MTMR10 (ENSVURG00010015528) FAN1 (ENSVURG00010015508) MPHOSPH10 (ENSVURG00010015493) MCEE (ENSVURG00010015487) APBA2 (ENSVURG00010015428) ENTREP2 (ENSVURG00010015413) TJP1 (ENSVURG00010014693) TARS3 (ENSVURG00010009741) Wallaby MODERN SPECIES 8872 ANXA2 (ENSMEUG00000008980) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000154257.h #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000154257.h #22 Diprotodontia ANCESTRAL SPECIES ENSGT00940000154257.h #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000154257.h #22 Common wonbat MODERN SPECIES 1046 DNER (ENSVURG00010007553) PID1 (ENSVURG00010007505) SPHKAP (ENSVURG00010007487) ENSVURG00010007474 DAW1 (ENSVURG00010007460) ENSVURG00010007454 SLC19A3 (ENSVURG00010007431) AGFG1 (ENSVURG00010007409) TM4SF20 (ENSVURG00010007397) MFF (ENSVURG00010007371) COL4A3 (ENSVURG00010007170) COL4A4 (ENSVURG00010007083) RHBDD1 (ENSVURG00010007051) IRS1 (ENSVURG00010007045) NYAP2 (ENSVURG00010006967) ENSVURG00010006940 #22 DOCK10 (ENSVURG00010006838) CUL3 (ENSVURG00010006798) FAM124B (ENSVURG00010006791) ENSVURG00010006785 koala MODERN SPECIES 41 MAPK1IP1L (ENSPCIG00000029785) ENSPCIG00000029784 MAP4K5 (ENSPCIG00000029712) DMAC2L (ENSPCIG00000029689) SOS2 (ENSPCIG00000022103) VCPKMT (ENSPCIG00000022101) ARF6 (ENSPCIG00000022099) ENSPCIG00000022098 FBXO33 (ENSPCIG00000022094) ENSPCIG00000022079 PNN (ENSPCIG00000025750) TRAPPC6B (ENSPCIG00000025752) GEMIN2 (ENSPCIG00000025754) SEC23A (ENSPCIG00000025756) ENSPCIG00000033006 ENSPCIG00000025760 #22 ENSPCIG00000023334 SSTR1 (ENSPCIG00000019519) ENSPCIG00000001434 FOXA1 (ENSPCIG00000015466) MIPOL1 (ENSPCIG00000015450) ENSPCIG00000009209 SLC25A21 (ENSPCIG00000015479) PAX9 (ENSPCIG00000015489) NKX2-8 (ENSPCIG00000009271) NKX2-1 (ENSPCIG00000014580) MBIP (ENSPCIG00000025612) BRMS1L (ENSPCIG00000037373) ENSPCIG00000036746 RALGAPA1 (ENSPCIG00000006590) INSM2 (ENSPCIG00000017418) Platypus MODERN SPECIES 16 DAPK2 (ENSOANG00000048356) HERC1 (ENSOANG00000011146) FBXL22 (ENSOANG00000049762) USP3 (ENSOANG00000011148) ENSOANG00000039721 CA12 (ENSOANG00000041610) APH1B (ENSOANG00000011151) #10 RAB8B (ENSOANG00000011153) #11 RPS27L (ENSOANG00000041300) #12 LACTB (ENSOANG00000014411) #13 TPM1 (ENSOANG00000011217) #14 TLN2 (ENSOANG00000002149) #16 VPS13C (ENSOANG00000002874) #19 RORA (ENSOANG00000012345) #20 ICE2 (ENSOANG00000012343) #21 ANXA2 (ENSOANG00000012341) #22 ENSOANG00000048817 BNIP2 (ENSOANG00000003500) #24 GTF2A2 (ENSOANG00000013776) #25 GCNT3 (ENSOANG00000006004) #26 OTUD7A (ENSOANG00000011103) KLF13 (ENSOANG00000044436) TRPM1 (ENSOANG00000010363) MTMR10 (ENSOANG00000010364) FAN1 (ENSOANG00000010366) MPHOSPH10 (ENSOANG00000010367) MCEE (ENSOANG00000010368) APBA2 (ENSOANG00000010369) ENSOANG00000010371 TJP1 (ENSOANG00000006832) ENSOANG00000013263 Sauria ANCESTRAL SPECIES 10 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT01030000234542.b.a.a.b.a.b ##14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00940000155024 ENSGT00950000185579 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A Archelosauria ANCESTRAL SPECIES 13 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A Cryptodira ANCESTRAL SPECIES 13 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.s ENSGT00940000162206.t ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00950000183083.a.d.a.fb #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A Emydidae ANCESTRAL SPECIES 38 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00950000183083.a.d.a.fb #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155854 ENSGT00940000165800 painted turtle MODERN SPECIES 2410 USP3 (ENSCPBG00000017826) ENSCPBG00000017821 CA12 (ENSCPBG00000017817) APH1B (ENSCPBG00000017813) #10 RAB8B (ENSCPBG00000017809) #11 RPS27L (ENSCPBG00000017807) #12 LACTB (ENSCPBG00000017803) #13 TPM1 (ENSCPBG00000017785) #14 ENSCPBG00000017759 TLN2 (ENSCPBG00000017671) #16 ENSCPBG00000017659 VPS13C (ENSCPBG00000017250) #19 ENSCPBG00000017154 RORA (ENSCPBG00000017149) #20 ICE2 (ENSCPBG00000017146) #21 ANXA2 (ENSCPBG00000017143) #22 FOXB1 (ENSCPBG00000017142) #23 BNIP2 (ENSCPBG00000017141) #24 GTF2A2 (ENSCPBG00000017140) #25 GCNT3 (ENSCPBG00000017139) #26 ENSCPBG00000017137 OTUD7A (ENSCPBG00000017134) KLF13 (ENSCPBG00000017133) TRPM1 (ENSCPBG00000011125) MTMR10 (ENSCPBG00000010954) FAN1 (ENSCPBG00000010941) MPHOSPH10 (ENSCPBG00000010930) MCEE (ENSCPBG00000010926) APBA2 (ENSCPBG00000010888) ENTREP2 (ENSCPBG00000010857) TJP1 (ENSCPBG00000010820) Three-toed box turtle MODERN SPECIES 27 USP3 (ENSTMTG00000010197) ENSTMTG00000010223 CA12 (ENSTMTG00000010244) APH1B (ENSTMTG00000010353) #10 RAB8B (ENSTMTG00000010364) #11 RPS27L (ENSTMTG00000010399) #12 LACTB (ENSTMTG00000010420) #13 TPM1 (ENSTMTG00000010444) #14 TLN2 (ENSTMTG00000011634) #16 ENSTMTG00000021849 ENSTMTG00000021853 VPS13C (ENSTMTG00000021931) #19 ENSTMTG00000022173 RORA (ENSTMTG00000022179) #20 ICE2 (ENSTMTG00000022190) #21 ANXA2 (ENSTMTG00000022198) #22 FOXB1 (ENSTMTG00000022204) #23 ENSTMTG00000022208 BNIP2 (ENSTMTG00000022215) #24 GCNT3 (ENSTMTG00000022223) #26 OTUD7A (ENSTMTG00000022228) KLF13 (ENSTMTG00000022231) ENSTMTG00000022234 TRPM1 (ENSTMTG00000022247) MTMR10 (ENSTMTG00000022303) FAN1 (ENSTMTG00000022309) MPHOSPH10 (ENSTMTG00000022316) MCEE (ENSTMTG00000022321) APBA2 (ENSTMTG00000022324) ENTREP2 (ENSTMTG00000022331) TJP1 (ENSTMTG00000022342) Testudinidae ANCESTRAL SPECIES 3 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206.s ENSGT00940000162206.t ENSGT00950000183083.a.d.a.fb #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024.k ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Goode s thornscrub tortoise MODERN SPECIES 1 HERC1 (ENSGEVG00005018107) FBXL22 (ENSGEVG00005018061) USP3 (ENSGEVG00005018026) CA12 (ENSGEVG00005017906) APH1B (ENSGEVG00005017830) #10 RAB8B (ENSGEVG00005017807) #11 RPS27L (ENSGEVG00005017792) #12 LACTB (ENSGEVG00005017734) #13 TPM1 (ENSGEVG00005017686) #14 TLN2 (ENSGEVG00005017009) #16 ENSGEVG00005016846 ENSGEVG00005016829 VPS13C (ENSGEVG00005010110) #19 ENSGEVG00005009244 ICE2 (ENSGEVG00005009113) #21 ANXA2 (ENSGEVG00005009073) #22 FOXB1 (ENSGEVG00005009058) #23 BNIP2 (ENSGEVG00005009019) #24 GTF2A2 (ENSGEVG00005008992) #25 GCNT3 (ENSGEVG00005008941) #26 OTUD7A (ENSGEVG00005008869) KLF13 (ENSGEVG00005008850) ENSGEVG00005008816 ENSGEVG00005008735 MTMR10 (ENSGEVG00005008694) FAN1 (ENSGEVG00005008622) MPHOSPH10 (ENSGEVG00005008583) MCEE (ENSGEVG00005008574) APBA2 (ENSGEVG00005008523) ENTREP2 (ENSGEVG00005008482) TJP1 (ENSGEVG00005008329) Abingdon island giant tortoise MODERN SPECIES 2046 VPS13C (ENSCABG00000020733) #19 ENSCABG00000020720 RORA (ENSCABG00000020717) #20 ICE2 (ENSCABG00000020715) #21 ANXA2 (ENSCABG00000020711) #22 FOXB1 (ENSCABG00000020708) #23 BNIP2 (ENSCABG00000020706) #24 GTF2A2 (ENSCABG00000020705) #25 GCNT3 (ENSCABG00000020704) #26 ENSCABG00000020701 Chinese turtle MODERN SPECIES 2156 RORA (ENSPSIG00000011314) #20 ICE2 (ENSPSIG00000012216) #21 ANXA2 (ENSPSIG00000012686) #22 BNIP2 (ENSPSIG00000013831) #24 GTF2A2 (ENSPSIG00000014538) #25 GCNT3 (ENSPSIG00000000701) #26 OTUD7A (ENSPSIG00000014649) KLF13 (ENSPSIG00000014849) TRPM1 (ENSPSIG00000015045) MTMR10 (ENSPSIG00000016934) ENSPSIG00000017401 FAN1 (ENSPSIG00000017524) MPHOSPH10 (ENSPSIG00000017642) MCEE (ENSPSIG00000017918) APBA2 (ENSPSIG00000017923) ENTREP2 (ENSPSIG00000017937) TJP1 (ENSPSIG00000005399) TARS3 (ENSPSIG00000008419) Archosauria ANCESTRAL SPECIES 9 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Aves ANCESTRAL SPECIES 14 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Neognathae ANCESTRAL SPECIES 11 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Neognathae_b ANCESTRAL SPECIES 13 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Neognathae_c ANCESTRAL SPECIES 15 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Golden eagle MODERN SPECIES 21 ENSACCG00020001722 DAPK2 (ENSACCG00020001767) HERC1 (ENSACCG00020001827) FBXL22 (ENSACCG00020001892) USP3 (ENSACCG00020001910) CA12 (ENSACCG00020001934) RAB8B (ENSACCG00020001969) #11 RPS27L (ENSACCG00020002006) #12 LACTB (ENSACCG00020002024) #13 TPM1 (ENSACCG00020002124) #14 TLN2 (ENSACCG00020002284) #16 ENSACCG00020002386 VPS13C (ENSACCG00020003550) #19 RORA (ENSACCG00020004236) #20 ICE2 (ENSACCG00020004246) #21 ANXA2 (ENSACCG00020004261) #22 FOXB1 (ENSACCG00020004266) #23 BNIP2 (ENSACCG00020004276) #24 GTF2A2 (ENSACCG00020004287) #25 GCNT3 (ENSACCG00020004293) #26 OTUD7A (ENSACCG00020004306) KLF13 (ENSACCG00020004318) TRPM1 (ENSACCG00020004421) MTMR10 (ENSACCG00020004503) FAN1 (ENSACCG00020004537) MPHOSPH10 (ENSACCG00020004552) MCEE (ENSACCG00020004567) APBA2 (ENSACCG00020004579) ENTREP2 (ENSACCG00020004606) TJP1 (ENSACCG00020004652) TARS3 (ENSACCG00020004893) Kakapo MODERN SPECIES 1 HERC1 (ENSSHBG00005017691) FBXL22 (ENSSHBG00005017653) CA12 (ENSSHBG00005017625) USP3 (ENSSHBG00005017610) RAB8B (ENSSHBG00005017591) #11 ENSSHBG00005017596 #11 RPS27L (ENSSHBG00005017587) #12 LACTB (ENSSHBG00005017583) #13 TPM1 (ENSSHBG00005017566) #14 TLN2 (ENSSHBG00005015587) #16 ENSSHBG00005015405 VPS13C (ENSSHBG00005012548) #19 RORA (ENSSHBG00005010586) #20 ENSSHBG00005010361 ICE2 (ENSSHBG00005010337) #21 ANXA2 (ENSSHBG00005010321) #22 FOXB1 (ENSSHBG00005010273) #23 BNIP2 (ENSSHBG00005000936) #24 GTF2A2 (ENSSHBG00005020522) #25 GCNT3 (ENSSHBG00005020519) #26 OTUD7A (ENSSHBG00005020517) KLF13 (ENSSHBG00005020514) TRPM1 (ENSSHBG00005020495) MTMR10 (ENSSHBG00005020483) FAN1 (ENSSHBG00005020475) MPHOSPH10 (ENSSHBG00005020469) MCEE (ENSSHBG00005020465) APBA2 (ENSSHBG00005020461) ENTREP2 (ENSSHBG00005020454) TJP1 (ENSSHBG00005020432) TARS3 (ENSSHBG00005020419) Passeriformes ANCESTRAL SPECIES 12 ENSGT00390000016025.b ENSGT00960000192402 ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Passeroidea ANCESTRAL SPECIES 12 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00960000187698 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Zebra finch MODERN SPECIES 1 ZNF592 (ENSTGUG00000004860) ENSTGUG00000019329 ALPK3 (ENSTGUG00000004879) ENSTGUG00000004884 SHF (ENSTGUG00000004965) ENSTGUG00000004957 RAB8B (ENSTGUG00000026889) #11 RPS27L (ENSTGUG00000026454) #12 LACTB (ENSTGUG00000004991) #13 TPM1 (ENSTGUG00000005002) #14 TLN2 (ENSTGUG00000005039) #16 ENSTGUG00000005224 VPS13C (ENSTGUG00000005229) #19 RORA (ENSTGUG00000005333) #20 ICE2 (ENSTGUG00000005359) #21 ANXA2 (ENSTGUG00000005370) #22 FOXB1 (ENSTGUG00000005409) #23 GTF2A2 (ENSTGUG00000005412) #24 GCNT3 (ENSTGUG00000005442) #26 OTUD7A (ENSTGUG00000005449) KLF13 (ENSTGUG00000028647) TRPM1 (ENSTGUG00000005474) MTMR10 (ENSTGUG00000005555) FAN1 (ENSTGUG00000005575) MCEE (ENSTGUG00000027488) MPHOSPH10 (ENSTGUG00000005578) APBA2 (ENSTGUG00000005613) ENTREP2 (ENSTGUG00000005645) TJP1 (ENSTGUG00000005653) TARS3 (ENSTGUG00000005726) TM2D3 (ENSTGUG00000005792) Common canary MODERN SPECIES 12 ENSSCAG00000016364 SHF (ENSSCAG00000016366) ENSSCAG00000016368 RAB8B (ENSSCAG00000016372) #11 ENSSCAG00000016374 #11 ENSSCAG00000016377 #12 LACTB (ENSSCAG00000016380) #13 TPM1 (ENSSCAG00000016386) #14 TLN2 (ENSSCAG00000016408) #16 ENSSCAG00000016429 ENSSCAG00000016431 #19 ENSSCAG00000016442 #19 ENSSCAG00000016449 RORA (ENSSCAG00000016454) #20 ICE2 (ENSSCAG00000016457) #21 ANXA2 (ENSSCAG00000016458) #22 FOXB1 (ENSSCAG00000016460) #23 BNIP2 (ENSSCAG00000016462) #24 GTF2A2 (ENSSCAG00000016468) #25 GCNT3 (ENSSCAG00000016472) #26 OTUD7A (ENSSCAG00000016480) KLF13 (ENSSCAG00000016484) TRPM1 (ENSSCAG00000016491) MTMR10 (ENSSCAG00000016501) FAN1 (ENSSCAG00000016504) MPHOSPH10 (ENSSCAG00000016507) MCEE (ENSSCAG00000016508) APBA2 (ENSSCAG00000016510) ENTREP2 (ENSSCAG00000016512) TJP1 (ENSSCAG00000016515) TARS3 (ENSSCAG00000016522) Medium ground finch MODERN SPECIES 101 SEC11A (ENSGFOG00000009799) ZNF592 (ENSGFOG00000009788) ENSGFOG00000009778 ALPK3 (ENSGFOG00000009761) ENSGFOG00000009743 SHF (ENSGFOG00000009720) RAB8B (ENSGFOG00000009702) #11 RPS27L (ENSGFOG00000009690) #12 LACTB (ENSGFOG00000009685) #13 TPM1 (ENSGFOG00000009675) #14 TLN2 (ENSGFOG00000009635) #16 ENSGFOG00000009623 VPS13C (ENSGFOG00000009086) #19 RORA (ENSGFOG00000009037) #20 ICE2 (ENSGFOG00000009022) #21 ANXA2 (ENSGFOG00000009012) #22 FOXB1 (ENSGFOG00000009007) #23 BNIP2 (ENSGFOG00000008998) #24 GTF2A2 (ENSGFOG00000008994) #25 GCNT3 (ENSGFOG00000008989) #26 OTUD7A (ENSGFOG00000008982) KLF13 (ENSGFOG00000008977) Flycatcher MODERN SPECIES 1 AAGAB (ENSFALG00000028875) SMAD3 (ENSFALG00000028582) SMAD6 (ENSFALG00000012842) ENSFALG00000023761 LCTL (ENSFALG00000012819) ZWILCH (ENSFALG00000012802) RPL4 (ENSFALG00000024664) LACTB (ENSFALG00000012785) #13 TPM1 (ENSFALG00000026833) #14 TLN2 (ENSFALG00000012750) #16 ENSFALG00000012743 VPS13C (ENSFALG00000012641) #19 RORA (ENSFALG00000012589) #20 ENSFALG00000026543 ICE2 (ENSFALG00000012586) #21 ANXA2 (ENSFALG00000028021) #22 FOXB1 (ENSFALG00000012555) #23 BNIP2 (ENSFALG00000012551) #24 GCNT3 (ENSFALG00000012547) #26 OTUD7A (ENSFALG00000012541) ENSFALG00000024778 TRPM1 (ENSFALG00000012539) MTMR10 (ENSFALG00000012534) FAN1 (ENSFALG00000012528) ENSFALG00000012524 ENSFALG00000028553 APBA2 (ENSFALG00000012520) ENSFALG00000012512 TJP1 (ENSFALG00000012482) ENSFALG00000012444 ENSFALG00000012412 Great tit MODERN SPECIES 1 IDH3A (ENSPMJG00000008486) CIB2 (ENSPMJG00000008487) ENSPMJG00000008488 ENSPMJG00000008489 DAPK2 (ENSPMJG00000008490) HERC1 (ENSPMJG00000008491) FBXL22 (ENSPMJG00000008855) USP3 (ENSPMJG00000008856) TPM1 (ENSPMJG00000009994) #14 CA12 (ENSPMJG00000009997) TLN2 (ENSPMJG00000010029) #16 ENSPMJG00000015909 VPS13C (ENSPMJG00000015910) #19 RORA (ENSPMJG00000015921) #20 ICE2 (ENSPMJG00000015922) #21 ANXA2 (ENSPMJG00000015923) #22 FOXB1 (ENSPMJG00000015925) #23 BNIP2 (ENSPMJG00000015926) #24 GTF2A2 (ENSPMJG00000015927) #25 GCNT3 (ENSPMJG00000015928) #26 OTUD7A (ENSPMJG00000015932) KLF13 (ENSPMJG00000015933) TRPM1 (ENSPMJG00000015936) MTMR10 (ENSPMJG00000015938) FAN1 (ENSPMJG00000015939) MPHOSPH10 (ENSPMJG00000015940) MCEE (ENSPMJG00000015941) APBA2 (ENSPMJG00000015942) ENTREP2 (ENSPMJG00000015944) TJP1 (ENSPMJG00000015946) TARS3 (ENSPMJG00000015950) Galloanserae ANCESTRAL SPECIES 10 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Phasianidae ANCESTRAL SPECIES 11 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Japanese quail MODERN SPECIES 1 CA12 (ENSCJPG00005008941) ENSCJPG00005008942 RAB8B (ENSCJPG00005008943) #11 ENSCJPG00005008944 #12 LACTB (ENSCJPG00005008945) #13 TPM1 (ENSCJPG00005008946) #14 TLN2 (ENSCJPG00005008947) #16 ENSCJPG00005012617 ENSCJPG00005012618 #19 ENSCJPG00005012673 #19 ENSCJPG00005012676 ENSCJPG00005012677 ENSCJPG00005012678 RORA (ENSCJPG00005012679) #20 ICE2 (ENSCJPG00005012681) #21 ANXA2 (ENSCJPG00005012682) #22 ENSCJPG00005012683 BNIP2 (ENSCJPG00005012687) #24 GTF2A2 (ENSCJPG00005012688) #25 GCNT3 (ENSCJPG00005012689) #26 OTUD7A (ENSCJPG00005012691) KLF13 (ENSCJPG00005012692) TRPM1 (ENSCJPG00005012693) MTMR10 (ENSCJPG00005012694) FAN1 (ENSCJPG00005012695) MPHOSPH10 (ENSCJPG00005012696) MCEE (ENSCJPG00005012697) APBA2 (ENSCJPG00005012698) ENTREP2 (ENSCJPG00005012699) TJP1 (ENSCJPG00005012700) ENSCJPG00005012701 Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Chicken MODERN SPECIES 1 TBC1D2B (ENSGALG00010024391) DAPK2 (ENSGALG00010024421) HERC1 (ENSGALG00010024437) FBXL22 (ENSGALG00010024463) USP3 (ENSGALG00010024482) CA12 (ENSGALG00010024499) RAB8B (ENSGALG00010024506) #11 RPS27L (ENSGALG00010024508) #12 LACTB (ENSGALG00010024517) #13 TPM1 (ENSGALG00010024570) #14 TLN2 (ENSGALG00010024582) #16 C2CD4A (ENSGALG00010024601) VPS13C (ENSGALG00010024618) #19 RORA (ENSGALG00010024646) #20 ICE2 (ENSGALG00010024663) #21 ANXA2 (ENSGALG00010024693) #22 FOXB1 (ENSGALG00010024704) #23 BNIP2 (ENSGALG00010024708) #24 GTF2A2 (ENSGALG00010024716) #25 GCNT3 (ENSGALG00010024725) #26 OTUD7A (ENSGALG00010024735) KLF13 (ENSGALG00010024744) TRPM1 (ENSGALG00010024748) MTMR10 (ENSGALG00010024751) FAN1 (ENSGALG00010024762) MPHOSPH10 (ENSGALG00010024776) MCEE (ENSGALG00010024785) APBA2 (ENSGALG00010024814) FAM189A1 (ENSGALG00010024835) TJP1 (ENSGALG00010024853) TARSL2 (ENSGALG00010024859) Turkey MODERN SPECIES 3 ENSMGAG00000004900 ENSMGAG00000004857 ENSMGAG00000004821 ENSMGAG00000004841 ENSMGAG00000020813 ENSMGAG00000004791 ENSMGAG00000004707 ENSMGAG00000019986 ENSMGAG00000004699 ENSMGAG00000018791 ENSMGAG00000004652 ENSMGAG00000021401 #26 ENSMGAG00000004646 #25 ENSMGAG00000004603 #24 ENSMGAG00000004598 ENSMGAG00000004536 #22 ENSMGAG00000021342 #21 ENSMGAG00000004508 #21 ENSMGAG00000004471 #20 ENSMGAG00000017941 ENSMGAG00000004364 #19 ENSMGAG00000018001 ENSMGAG00000004247 #16 ENSMGAG00000017595 ##14 ENSMGAG00000004207 #14 ENSMGAG00000016121 #12 ENSMGAG00000004190 #13 ENSMGAG00000020980 RAB8B (ENSMGAG00000004169) #11 ENSMGAG00000004066 ENSMGAG00000004108 Anatidae ANCESTRAL SPECIES 23 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.a.a ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Duck MODERN SPECIES 2 ENSAPLG00000030490 FBXL22 (ENSAPLG00000003321) ENSAPLG00000003323 ENSAPLG00000023215 CA12 (ENSAPLG00000003479) RAB8B (ENSAPLG00000003603) #11 RPS27L (ENSAPLG00000003604) #12 LACTB (ENSAPLG00000003635) #13 TPM1 (ENSAPLG00000003656) #14 TLN2 (ENSAPLG00000004060) #16 ENSAPLG00000004983 VPS13C (ENSAPLG00000004988) #19 RORA (ENSAPLG00000005866) #20 ENSAPLG00000024368 ICE2 (ENSAPLG00000005981) #21 ANXA2 (ENSAPLG00000006103) #22 FOXB1 (ENSAPLG00000028441) #23 BNIP2 (ENSAPLG00000006267) #24 GTF2A2 (ENSAPLG00000006577) #25 GCNT3 (ENSAPLG00000025980) #26 OTUD7A (ENSAPLG00000006607) KLF13 (ENSAPLG00000006681) ENSAPLG00000023866 ENSAPLG00000005599 ENSAPLG00000025093 MTMR10 (ENSAPLG00000006723) FAN1 (ENSAPLG00000007284) MCEE (ENSAPLG00000007573) APBA2 (ENSAPLG00000007575) ENTREP2 (ENSAPLG00000007880) TJP1 (ENSAPLG00000007911) Pink-footed goose MODERN SPECIES 21 FBXL22 (ENSABRG00000007146) ENSABRG00000007151 USP3 (ENSABRG00000007213) CA12 (ENSABRG00000009150) RAB8B (ENSABRG00000009524) #11 RPS27L (ENSABRG00000009884) #12 LACTB (ENSABRG00000009891) #13 TPM1 (ENSABRG00000010002) #14 TLN2 (ENSABRG00000010667) #16 ENSABRG00000011819 ENSABRG00000011828 VPS13C (ENSABRG00000012214) #19 ENSABRG00000015111 RORA (ENSABRG00000015129) #20 ICE2 (ENSABRG00000015132) #21 ANXA2 (ENSABRG00000015138) #22 FOXB1 (ENSABRG00000015143) #23 BNIP2 (ENSABRG00000015153) #24 GTF2A2 (ENSABRG00000015158) #25 GCNT3 (ENSABRG00000015163) #26 OTUD7A (ENSABRG00000015174) KLF13 (ENSABRG00000015182) TRPM1 (ENSABRG00000015184) MTMR10 (ENSABRG00000015200) FAN1 (ENSABRG00000015206) MPHOSPH10 (ENSABRG00000015211) MCEE (ENSABRG00000015215) APBA2 (ENSABRG00000015217) ENTREP2 (ENSABRG00000015223) TJP1 (ENSABRG00000015240) TARS3 (ENSABRG00000015273) African ostrich MODERN SPECIES 834 TBC1D2B (ENSSCUG00000015795) DAPK2 (ENSSCUG00000015789) HERC1 (ENSSCUG00000015727) FBXL22 (ENSSCUG00000015679) USP3 (ENSSCUG00000015643) CA12 (ENSSCUG00000015627) RAB8B (ENSSCUG00000015611) #11 ENSSCUG00000015608 LACTB (ENSSCUG00000015607) #13 TPM1 (ENSSCUG00000015605) #14 TLN2 (ENSSCUG00000015594) #16 ENSSCUG00000015590 VPS13C (ENSSCUG00000015328) #19 RORA (ENSSCUG00000015113) #20 ICE2 (ENSSCUG00000015089) #21 ANXA2 (ENSSCUG00000015079) #22 BNIP2 (ENSSCUG00000015068) #24 GTF2A2 (ENSSCUG00000015065) #25 GCNT3 (ENSSCUG00000015063) #26 ENSSCUG00000015059 ENSSCUG00000015058 OTUD7A (ENSSCUG00000015055) KLF13 (ENSSCUG00000015052) TRPM1 (ENSSCUG00000015019) ENSSCUG00000015007 ENSSCUG00000014999 FAN1 (ENSSCUG00000014993) MPHOSPH10 (ENSSCUG00000014973) MCEE (ENSSCUG00000014963) APBA2 (ENSSCUG00000014957) ENSSCUG00000014950 Lepidosauria ANCESTRAL SPECIES 46 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #10 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00940000155024 ENSGT00950000185579 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000153941.a.a ENSGT00940000158943 tuatara MODERN SPECIES 1480 ENSSPUG00000010393 RORA (ENSSPUG00000010300) #20 ICE2 (ENSSPUG00000010015) #21 ANXA2 (ENSSPUG00000009928) #22 Episquamata ANCESTRAL SPECIES 9 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Laterata ANCESTRAL SPECIES 33 ENSGT00940000153424.a.a.c.b ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00950000182891.a.a.a #12 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000159348.f Common wall lizard MODERN SPECIES 5 TBC1D2B (ENSPMRG00000023313) DAPK2 (ENSPMRG00000023290) HERC1 (ENSPMRG00000023186) FBXL22 (ENSPMRG00000023165) USP3 (ENSPMRG00000023033) CA12 (ENSPMRG00000022998) RAB8B (ENSPMRG00000022969) #11 RPS27L (ENSPMRG00000022964) #12 LACTB (ENSPMRG00000022956) #13 TPM1 (ENSPMRG00000022870) #14 TLN2 (ENSPMRG00000022537) #16 ENSPMRG00000022445 VPS13C (ENSPMRG00000021841) #19 RORA (ENSPMRG00000021742) #20 ICE2 (ENSPMRG00000021730) #21 ANXA2 (ENSPMRG00000021720) #22 FOXB1 (ENSPMRG00000021714) #23 BNIP2 (ENSPMRG00000021671) #24 GTF2A2 (ENSPMRG00000021660) #25 GCNT3 (ENSPMRG00000021658) #26 ENSPMRG00000021656 OTUD7A (ENSPMRG00000021652) KLF13 (ENSPMRG00000021647) TRPM1 (ENSPMRG00000019686) MTMR10 (ENSPMRG00000019361) FAN1 (ENSPMRG00000019356) MPHOSPH10 (ENSPMRG00000019350) ENSPMRG00000019343 APBA2 (ENSPMRG00000019327) ENTREP2 (ENSPMRG00000019315) TJP1 (ENSPMRG00000019063) Argentine black and white tegu MODERN SPECIES 95 FAM81A (ENSSMRG00000022654) #28 TBC1D2B (ENSSMRG00000022653) DAPK2 (ENSSMRG00000022652) HERC1 (ENSSMRG00000022651) FBXL22 (ENSSMRG00000022650) USP3 (ENSSMRG00000022392) CA12 (ENSSMRG00000022390) RAB8B (ENSSMRG00000022389) #11 LACTB (ENSSMRG00000022388) #13 TPM1 (ENSSMRG00000022387) #14 TLN2 (ENSSMRG00000016377) #16 ENSSMRG00000016374 VPS13C (ENSSMRG00000016373) #19 RORA (ENSSMRG00000016372) #20 ICE2 (ENSSMRG00000016371) #21 ANXA2 (ENSSMRG00000016370) #22 FOXB1 (ENSSMRG00000016369) #23 BNIP2 (ENSSMRG00000016368) #24 GTF2A2 (ENSSMRG00000016366) #25 Toxicofera ANCESTRAL SPECIES 15 ENSGT00390000004985.b #28 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699 #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Lizard MODERN SPECIES 1040 VPS13C (ENSACAG00000015936) #19 RORA (ENSACAG00000015903) #20 ENSACAG00000022633 #21 ANXA2 (ENSACAG00000015820) #22 ENSACAG00000025543 BNIP2 (ENSACAG00000003166) #24 GTF2A2 (ENSACAG00000003163) #25 GCNT3 (ENSACAG00000003159) #26 OTUD7A (ENSACAG00000003121) KLF13 (ENSACAG00000003119) ENSACAG00000035493 ENSACAG00000045321 ENSACAG00000002770 MTMR10 (ENSACAG00000002710) FAN1 (ENSACAG00000002692) ENSACAG00000002642 ENSACAG00000002635 Elapidae ANCESTRAL SPECIES 12 ENSGT00390000004985.b #28 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699.c #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Elapidae_a ANCESTRAL SPECIES 17 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699.d #16 ENSGT00940000154699.c #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Acanthophiinae ANCESTRAL SPECIES 17 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #11 ENSGT00390000001062 #13 ENSGT01030000234542.b.a.a.b.a.a #14 ENSGT00940000154699.d #16 ENSGT00940000154699.c.a #16 ENSGT00940000162206 ENSGT00950000183083.a.d.a #19 ENSGT00940000157387 #20 ENSGT01010000223714 ENSGT00940000154257 #22 ENSGT00940000160522 #23 ENSGT00940000158531 #24 ENSGT00390000014572 #25 ENSGT00940000159331.b #26 ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199511 ENSGT00940000155024 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 Eastern brown snake DUPLICATION Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 459 ENSPTXG00000017427 #22 Eastern brown snake MODERN SPECIES 458 ENSPTXG00000017426 #22 Eastern brown snake MODERN SPECIES 457 ENSPTXG00000017425 #22 Mainland tiger snake MODERN SPECIES 168 FAM81A (ENSNSUG00000015051) #28 TBC1D2B (ENSNSUG00000015053) DAPK2 (ENSNSUG00000015054) HERC1 (ENSNSUG00000015055) FBXL22 (ENSNSUG00000015209) USP3 (ENSNSUG00000015210) CA12 (ENSNSUG00000016428) RAB8B (ENSNSUG00000016429) #11 LACTB (ENSNSUG00000016430) #13 TPM1 (ENSNSUG00000016431) #14 TLN2 (ENSNSUG00000016432) #16 ENSNSUG00000016468 VPS13C (ENSNSUG00000016476) #19 RORA (ENSNSUG00000017632) #20 ENSNSUG00000017636 ANXA2 (ENSNSUG00000017637) #22 FOXB1 (ENSNSUG00000017638) #23 BNIP2 (ENSNSUG00000017639) #24 GTF2A2 (ENSNSUG00000017640) #25 GCNT3 (ENSNSUG00000017642) #26 OTUD7A (ENSNSUG00000017645) ENSNSUG00000017647 KLF13 (ENSNSUG00000017648) ENSNSUG00000017649 ENSNSUG00000017650 ENSNSUG00000017653 MTMR10 (ENSNSUG00000017691) FAN1 (ENSNSUG00000017736) MPHOSPH10 (ENSNSUG00000017737) ENSNSUG00000017738 ENSNSUG00000017739 Blue-lipped sea krait MODERN SPECIES 4402 ENSLLTG00000012989 ##14 TLN2 (ENSLLTG00000012345) #16 ENSLLTG00000012228 VPS13C (ENSLLTG00000011812) #19 RORA (ENSLLTG00000011731) #20 ICE2 (ENSLLTG00000011704) #21 ANXA2 (ENSLLTG00000011680) #22 FOXB1 (ENSLLTG00000011675) #23 BNIP2 (ENSLLTG00000011664) #24 GTF2A2 (ENSLLTG00000011648) #25 GCNT3 (ENSLLTG00000011638) #26 OTUD7A (ENSLLTG00000011611) KLF13 (ENSLLTG00000011592) TRPM1 (ENSLLTG00000011509) MTMR10 (ENSLLTG00000011465) FAN1 (ENSLLTG00000011424) MPHOSPH10 (ENSLLTG00000011407) Indian cobra MODERN SPECIES 14 MYO1E (ENSNNAG00000015790) #30 TBC1D2B (ENSNNAG00000017352) DAPK2 (ENSNNAG00000017373) HERC1 (ENSNNAG00000017461) FBXL22 (ENSNNAG00000017821) USP3 (ENSNNAG00000017843) CA12 (ENSNNAG00000017885) RAB8B (ENSNNAG00000017888) #11 LACTB (ENSNNAG00000017891) #13 TPM1 (ENSNNAG00000017894) #14 TLN2 (ENSNNAG00000017923) #16 ENSNNAG00000018234 VPS13C (ENSNNAG00000018404) #19 RORA (ENSNNAG00000018906) #20 ICE2 (ENSNNAG00000003778) #21 ANXA2 (ENSNNAG00000003810) #22 BNIP2 (ENSNNAG00000003933) #24 GTF2A2 (ENSNNAG00000004440) #25 GCNT3 (ENSNNAG00000004470) #26 OTUD7A (ENSNNAG00000004508) KLF13 (ENSNNAG00000004522) TRPM1 (ENSNNAG00000004567) MTMR10 (ENSNNAG00000004919) MPHOSPH10 (ENSNNAG00000004974) ENSNNAG00000005023 APBA2 (ENSNNAG00000005039) ENSNNAG00000005062 TJP1 (ENSNNAG00000005105) ENSNNAG00000005322 TM2D3 (ENSNNAG00000005352) ADAL (ENSNNAG00000005366) Anura ANCESTRAL SPECIES 5 ENSGT00930000151452 ENSGT00940000160359 ENSGT00390000016435 ENSGT00950000183037.A.a ENSGT00940000157431 ENSGT00940000167848 ENSGT00950000182938.b.b.b.b.a ENSGT00940000157689 ENSGT00940000156476 ENSGT00390000016075 ENSGT00390000000860.a ENSGT00390000001424 ENSGT00390000002564.b ENSGT00940000157387 #20 ENSGT00390000006883 #21 ENSGT00940000154257 #22 ENSGT00940000155491.c ENSGT00940000157447 ENSGT00510000047494 ENSGT00940000160162 ENSGT00940000154091.a.b ENSGT00940000154996.a.b ENSGT00940000158464 ENSGT00940000157591 ENSGT00390000015967 ENSGT00940000158358 ENSGT01030000234614.C ENSGT00940000160967.d ENSGT00940000160967.c ENSGT00940000153246.a.a.a ENSGT00390000017366 Frog DUPLICATION Frog MODERN SPECIES 3 cyp1a1 (ENSXETG00000021140) ENSXETG00000045847 csk (ENSXETG00000021139) cplx3 (ENSXETG00000021136) lman1l (ENSXETG00000021134) ulk3 (ENSXETG00000021133) scamp2 (ENSXETG00000025486) mpi (ENSXETG00000021131) FAM219B (ENSXETG00000034668) cox5a (ENSXETG00000021126) RPP25 (ENSXETG00000025487) rora (ENSXETG00000021123) #20 ice2 (ENSXETG00000021120) #21 ENSXETG00000049052 ENSXETG00000045264 anxa2 (ENSXETG00000015289) #22 sin3a (ENSXETG00000015283) ptpn9 (ENSXETG00000015282) snupn (ENSXETG00000015280) snx33 (ENSXETG00000015279) cspg4 (ENSXETG00000015273) lingo1 (ENSXETG00000015270) hmg20a (ENSXETG00000015269) peak1 (ENSXETG00000034833) ubl7 (ENSXETG00000015267) ENSXETG00000047031 ENSXETG00000045234 stoml1 (ENSXETG00000015266) ENSXETG00000046073 islr2 (ENSXETG00000016565) ENSXETG00000038762 Frog MODERN SPECIES 8 XB5856184 [provisional:crp] (ENSXETG00000046752) crp.4 (ENSXETG00000027272) ENSXETG00000037685 ENSXETG00000045396 ENSXETG00000046147 crp.1 (ENSXETG00000003976) ENSXETG00000045016 ENSXETG00000049438 ENSXETG00000037802 ENSXETG00000035861 ENSXETG00000047960 arnt (ENSXETG00000008942) ENSXETG00000045572 setdb1 (ENSXETG00000008936) cers2 (ENSXETG00000038346) anxa9 (ENSXETG00000031026) #22 ENSXETG00000026666 ENSXETG00000035955 ctsk (ENSXETG00000035558) ENSXETG00000048153 XB986811 [provisional:ctsk] (ENSXETG00000008916) ctss (ENSXETG00000008914) hormad1 (ENSXETG00000008913) golph3l (ENSXETG00000008912) onecut1.2 (ENSXETG00000040174) ensa (ENSXETG00000026684) mcl1 (ENSXETG00000008910) ENSXETG00000047405 adamtsl4 (ENSXETG00000018086) ECM1 (ENSXETG00000036393) tars2 (ENSXETG00000018640) Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 6 CSK (ENSLLEG00000017228) ENSLLEG00000017600 ENSLLEG00000017661 CPLX3 (ENSLLEG00000017811) ULK3 (ENSLLEG00000017863) ENSLLEG00000018237 ENSLLEG00000018322 ENSLLEG00000018516 MPI (ENSLLEG00000018554) FAM219B (ENSLLEG00000018689) COX5A (ENSLLEG00000018880) RPP25 (ENSLLEG00000018993) ENSLLEG00000019037 RORA (ENSLLEG00000019080) #20 ENSLLEG00000019641 #21 ANXA2 (ENSLLEG00000019836) #22 SIN3A (ENSLLEG00000020147) ENSLLEG00000020438 PTPN9 (ENSLLEG00000020463) SNUPN (ENSLLEG00000020593) SNX33 (ENSLLEG00000020678) CSPG4 (ENSLLEG00000020723) ENSLLEG00000020910 ENSLLEG00000020977 ENSLLEG00000021020 ENSLLEG00000021048 ENSLLEG00000021087 LINGO1 (ENSLLEG00000021115) HMG20A (ENSLLEG00000021166) PEAK1 (ENSLLEG00000021333) UBL7 (ENSLLEG00000021432) Leishan spiny toad MODERN SPECIES 4 NAXE (ENSLLEG00000021902) ENSLLEG00000022057 UBQLN4 (ENSLLEG00000022159) LAMTOR2 (ENSLLEG00000022949) RAB25 (ENSLLEG00000023071) ENSLLEG00000023357 ENSLLEG00000023375 ENSLLEG00000023443 ENSLLEG00000023463 APH1A (ENSLLEG00000023550) ##10 ENSLLEG00000023606 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023756 ENSLLEG00000023770 CERS2 (ENSLLEG00000023791) ENSLLEG00000024071 #22 ENSLLEG00000024161 ENSLLEG00000024205 ENSLLEG00000024244 ENSLLEG00000024267 ENSLLEG00000024319 ENSLLEG00000024371 ENSLLEG00000024420 ENSLLEG00000024452 ENSLLEG00000024492 ENSLLEG00000024540 ENSLLEG00000024585 SETDB1 (ENSLLEG00000024673) CTXND1 (ENSLLEG00000025268) ARNT (ENSLLEG00000025310) ENSLLEG00000025464 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 238 DAPK2 (ENSLACG00000003913) HERC1 (ENSLACG00000007000) FBXL22 (ENSLACG00000010074) USP3 (ENSLACG00000010249) CA12 (ENSLACG00000011724) ENSLACG00000011832 APH1B (ENSLACG00000012093) #10 RAB8B (ENSLACG00000012265) #11 rps27.1 (ENSLACG00000012660) ##12 TPM1 (ENSLACG00000012977) #14 TLN2 (ENSLACG00000013827) #16 c2cd4a (ENSLACG00000015197) VPS13C (ENSLACG00000015884) #19 RORA (ENSLACG00000017448) #20 ICE2 (ENSLACG00000017527) #21 ANXA2 (ENSLACG00000017614) #22 FOXB1 (ENSLACG00000017859) #23 BNIP2 (ENSLACG00000018015) #24 GTF2A2 (ENSLACG00000018037) #25 GCNT3 (ENSLACG00000018044) #26 ENSLACG00000018053 OTUD7A (ENSLACG00000018223) KLF13 (ENSLACG00000018298) bhlhe40 (ENSLACG00000018330) TRPM1 (ENSLACG00000018401) MTMR10 (ENSLACG00000018435) FAN1 (ENSLACG00000018462) MPHOSPH10 (ENSLACG00000018472) MCEE (ENSLACG00000018482) APBA2 (ENSLACG00000018525) ENTREP2 (ENSLACG00000018551) Coelacanth MODERN SPECIES 1495 SETDB1 (ENSLACG00000011159) CERS2 (ENSLACG00000010852) ENSLACG00000010189 #22 MINDY1 (ENSLACG00000009951) ##36 PRUNE1 (ENSLACG00000009440) bnipl (ENSLACG00000009059) ADAMTSL4 (ENSLACG00000008278) ENSLACG00000007145 UBAP2L (ENSLACG00000003117) C1orf43 (ENSLACG00000002718) ENSLACG00000002090