Euteleostomi ANCESTRAL SPECIES 392 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 Sarcopterygii ANCESTRAL SPECIES 78 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Tetrapoda ANCESTRAL SPECIES 34 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000166915 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.b ##22 ENSGT00940000165854 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Amniota ANCESTRAL SPECIES 27 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165854 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Mammalia ANCESTRAL SPECIES 23 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Theria ANCESTRAL SPECIES 23 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Eutheria ANCESTRAL SPECIES 7 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Carnivora ANCESTRAL SPECIES 18 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Felidae ANCESTRAL SPECIES 16 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Panthera ANCESTRAL SPECIES 11 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Panthera_a ANCESTRAL SPECIES 10 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 leopard MODERN SPECIES 83 TOR1B (ENSPPRG00000020142) #7 TOR1A (ENSPPRG00000021638) #8 C9orf78 (ENSPPRG00000000737) #9 USP20 (ENSPPRG00000002771) #10 FNBP1 (ENSPPRG00000005330) #11 GPR107 (ENSPPRG00000008226) #12 NCS1 (ENSPPRG00000009454) #13 ASS1 (ENSPPRG00000020977) #14 FUBP3 (ENSPPRG00000023251) #15 PRDM12 (ENSPPRG00000023024) #16 EXOSC2 (ENSPPRG00000001089) #17 ABL1 (ENSPPRG00000002576) #18 QRFP (ENSPPRG00000016075) #19 FIBCD1 (ENSPPRG00000003917) #20 LAMC3 (ENSPPRG00000005503) #21 AIF1L (ENSPPRG00000007374) #22 NUP214 (ENSPPRG00000012721) #23 FAM78A (ENSPPRG00000012957) #24 PLPP7 (ENSPPRG00000013265) #25 PRRC2B (ENSPPRG00000001024) #26 POMT1 (ENSPPRG00000004061) #27 UCK1 (ENSPPRG00000005312) #28 PRRT1B (ENSPPRG00000005555) #29 RAPGEF1 (ENSPPRG00000009403) #30 MED27 (ENSPPRG00000011635) #31 NTNG2 (ENSPPRG00000012075) #32 SETX (ENSPPRG00000012867) #33 ENSPPRG00000013458 #34 CFAP77 (ENSPPRG00000013940) #35 BARHL1 (ENSPPRG00000014315) #36 GTF3C4 (ENSPPRG00000023751) #37 lion MODERN SPECIES 13 ENSPLOG00000011711 #8 C9orf78 (ENSPLOG00000011661) #9 USP20 (ENSPLOG00000011587) #10 FNBP1 (ENSPLOG00000011409) #11 GPR107 (ENSPLOG00000010916) #12 ENSPLOG00000010826 HMCN2 (ENSPLOG00000010351) ASS1 (ENSPLOG00000010161) #14 FUBP3 (ENSPLOG00000010042) #15 PRDM12 (ENSPLOG00000009988) #16 EXOSC2 (ENSPLOG00000009904) #17 ABL1 (ENSPLOG00000009827) #18 ENSPLOG00000009790 #19 FIBCD1 (ENSPLOG00000009735) #20 LAMC3 (ENSPLOG00000009600) #21 AIF1L (ENSPLOG00000009527) #22 NUP214 (ENSPLOG00000009245) #23 PLPP7 (ENSPLOG00000009099) #25 PRRC2B (ENSPLOG00000008611) #26 POMT1 (ENSPLOG00000008262) #27 UCK1 (ENSPLOG00000008110) #28 RAPGEF1 (ENSPLOG00000007743) #30 MED27 (ENSPLOG00000007533) #31 NTNG2 (ENSPLOG00000022306) #32 SETX (ENSPLOG00000022285) #33 TTF1 (ENSPLOG00000022265) #34 CFAP77 (ENSPLOG00000022256) #35 BARHL1 (ENSPLOG00000022248) #36 DDX31 (ENSPLOG00000022208) GTF3C4 (ENSPLOG00000022189) #37 AK8 (ENSPLOG00000022172) Tiger MODERN SPECIES 121 PTGES (ENSPTIG00000017624) TOR1B (ENSPTIG00000018297) #7 TOR1A (ENSPTIG00000019171) #8 C9orf78 (ENSPTIG00000004001) #9 ENSPTIG00000005975 #10 FNBP1 (ENSPTIG00000008070) #11 GPR107 (ENSPTIG00000014552) #12 NCS1 (ENSPTIG00000016706) #13 ENSPTIG00000018225 ASS1 (ENSPTIG00000018633) #14 FUBP3 (ENSPTIG00000019979) #15 EXOSC2 (ENSPTIG00000021163) #17 ABL1 (ENSPTIG00000008573) #18 QRFP (ENSPTIG00000006457) #19 LAMC3 (ENSPTIG00000010612) #21 AIF1L (ENSPTIG00000012522) #22 ENSPTIG00000014798 NUP214 (ENSPTIG00000015623) #23 FAM78A (ENSPTIG00000017998) #24 ENSPTIG00000006604 #25 PRRC2B (ENSPTIG00000019108) #26 ENSPTIG00000009105 #27 UCK1 (ENSPTIG00000011425) #28 RAPGEF1 (ENSPTIG00000014173) #30 MED27 (ENSPTIG00000019985) #31 SETX (ENSPTIG00000021101) #33 ENSPTIG00000007300 #34 CFAP77 (ENSPTIG00000008549) #35 BARHL1 (ENSPTIG00000010132) #36 GTF3C4 (ENSPTIG00000013338) #37 AK8 (ENSPTIG00000013682) Cat MODERN SPECIES 244 TOR1B (ENSFCAG00000008977) #7 CD4H9orf78 (ENSFCAG00000004761) #9 USP20 (ENSFCAG00000013549) #10 FNBP1 (ENSFCAG00000035160) #11 GPR107 (ENSFCAG00000005107) #12 NCS1 (ENSFCAG00000005109) HMCN2 (ENSFCAG00000030267) ASS1 (ENSFCAG00000005111) #14 FUBP3 (ENSFCAG00000005113) #15 PRDM12 (ENSFCAG00000043086) #16 EXOSC2 (ENSFCAG00000025936) #17 ABL1 (ENSFCAG00000005115) #18 QRFP (ENSFCAG00000046249) #19 FIBCD1 (ENSFCAG00000005117) #20 LAMC3 (ENSFCAG00000005118) #21 AIF1L (ENSFCAG00000032353) #22 ENSFCAG00000047842 NUP214 (ENSFCAG00000005120) #23 FAM78A (ENSFCAG00000025273) #24 PLPP7 (ENSFCAG00000005122) #25 PRRC2B (ENSFCAG00000049201) #26 POMT1 (ENSFCAG00000008385) #27 UCK1 (ENSFCAG00000032302) #28 PRRT1B (ENSFCAG00000034542) #29 RAPGEF1 (ENSFCAG00000007100) #30 MED27 (ENSFCAG00000007101) #31 NTNG2 (ENSFCAG00000028886) #32 SETX (ENSFCAG00000007102) #33 TTF1 (ENSFCAG00000039920) #34 CFAP77 (ENSFCAG00000024893) #35 BARHL1 (ENSFCAG00000007105) #36 Caniformia ANCESTRAL SPECIES 16 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Canidae ANCESTRAL SPECIES 2 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Red fox MODERN SPECIES 77 CUNH9orf78 (ENSVVUG00000027415) #9 USP20 (ENSVVUG00000027434) #10 FNBP1 (ENSVVUG00000027452) #11 ENSVVUG00000027457 GPR107 (ENSVVUG00000027461) #12 ENSVVUG00000027466 ASS1 (ENSVVUG00000027500) #14 ENSVVUG00000027636 FUBP3 (ENSVVUG00000027641) #15 PRDM12 (ENSVVUG00000027662) #16 EXOSC2 (ENSVVUG00000027665) #17 ABL1 (ENSVVUG00000027674) #18 QRFP (ENSVVUG00000027680) #19 FIBCD1 (ENSVVUG00000027682) #20 LAMC3 (ENSVVUG00000027684) #21 AIF1L (ENSVVUG00000027686) #22 NUP214 (ENSVVUG00000027727) #23 FAM78A (ENSVVUG00000028056) #24 PLPP7 (ENSVVUG00000028058) #25 PRRC2B (ENSVVUG00000028063) #26 POMT1 (ENSVVUG00000028093) #27 UCK1 (ENSVVUG00000028334) #28 RAPGEF1 (ENSVVUG00000028347) #30 ENSVVUG00000028373 MED27 (ENSVVUG00000028375) #31 NTNG2 (ENSVVUG00000028377) #32 SETX (ENSVVUG00000028381) #33 TTF1 (ENSVVUG00000028389) #34 CFAP77 (ENSVVUG00000028394) #35 BARHL1 (ENSVVUG00000028398) #36 DDX31 (ENSVVUG00000028399) Canis_lupus ANCESTRAL SPECIES 3 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Dingo MODERN SPECIES 327 USP20 (ENSCAFG00020023699) #10 FNBP1 (ENSCAFG00020023720) #11 GPR107 (ENSCAFG00020023954) #12 NCS1 (ENSCAFG00020023988) #13 ENSCAFG00020023990 ENSCAFG00020023994 ASS1 (ENSCAFG00020023998) #14 ENSCAFG00020023999 FUBP3 (ENSCAFG00020024002) #15 PRDM12 (ENSCAFG00020024046) #16 EXOSC2 (ENSCAFG00020024047) #17 ABL1 (ENSCAFG00020024055) #18 QRFP (ENSCAFG00020024083) #19 FIBCD1 (ENSCAFG00020024086) #20 LAMC3 (ENSCAFG00020024114) #21 AIF1L (ENSCAFG00020024184) #22 NUP214 (ENSCAFG00020024205) #23 FAM78A (ENSCAFG00020024451) #24 PLPP7 (ENSCAFG00020024453) #25 PRRC2B (ENSCAFG00020024457) #26 POMT1 (ENSCAFG00020024466) #27 UCK1 (ENSCAFG00020024467) #28 PRRT1B (ENSCAFG00020024468) #29 RAPGEF1 (ENSCAFG00020024469) #30 MED27 (ENSCAFG00020024473) #31 NTNG2 (ENSCAFG00020024478) #32 SETX (ENSCAFG00020024489) #33 TTF1 (ENSCAFG00020024520) #34 CFAP77 (ENSCAFG00020024540) #35 BARHL1 (ENSCAFG00020024543) #36 DDX31 (ENSCAFG00020024548) Dog MODERN SPECIES 37 C9orf78 (ENSCAFG00845023258) #9 USP20 (ENSCAFG00845023043) #10 FNBP1 (ENSCAFG00845022336) #11 GPR107 (ENSCAFG00845021950) #12 ENSCAFG00845021859 ENSCAFG00845021728 ASS1 (ENSCAFG00845021573) #14 ENSCAFG00845021540 FUBP3 (ENSCAFG00845021240) #15 PRDM12 (ENSCAFG00845021131) #16 EXOSC2 (ENSCAFG00845020890) #17 ABL1 (ENSCAFG00845020595) #18 QRFP (ENSCAFG00845020546) #19 FIBCD1 (ENSCAFG00845020483) #20 LAMC3 (ENSCAFG00845020359) #21 AIF1L (ENSCAFG00845020252) #22 NUP214 (ENSCAFG00845020000) #23 FAM78A (ENSCAFG00845019937) #24 PLPP7 (ENSCAFG00845019908) #25 PRRC2B (ENSCAFG00845019333) #26 POMT1 (ENSCAFG00845018932) #27 UCK1 (ENSCAFG00845018761) #28 PRRT1B (ENSCAFG00845018678) #29 RAPGEF1 (ENSCAFG00845018101) #30 MED27 (ENSCAFG00845017764) #31 NTNG2 (ENSCAFG00845017552) #32 SETX (ENSCAFG00845017137) #33 TTF1 (ENSCAFG00845016913) #34 CFAP77 (ENSCAFG00845016847) #35 BARHL1 (ENSCAFG00845016811) #36 DDX31 (ENSCAFG00845016626) Caniformia_b ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Mustelinae ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 American mink MODERN SPECIES 182 TOR1B (ENSNVIG00000016675) #7 TOR1A (ENSNVIG00000016693) #8 C9orf78 (ENSNVIG00000016711) #9 USP20 (ENSNVIG00000016742) #10 FNBP1 (ENSNVIG00000016798) #11 GPR107 (ENSNVIG00000017208) #12 ENSNVIG00000017368 HMCN2 (ENSNVIG00000017387) ASS1 (ENSNVIG00000017500) #14 FUBP3 (ENSNVIG00000017557) #15 EXOSC2 (ENSNVIG00000017595) #17 ABL1 (ENSNVIG00000017711) #18 QRFP (ENSNVIG00000017730) #19 FIBCD1 (ENSNVIG00000017742) #20 LAMC3 (ENSNVIG00000017786) #21 AIF1L (ENSNVIG00000017815) #22 NUP214 (ENSNVIG00000017837) #23 FA78A (ENSNVIG00000018035) #24 PLPP7 (ENSNVIG00000018057) #25 PRRC2B (ENSNVIG00000018088) #26 POMT1 (ENSNVIG00000018225) #27 UCK1 (ENSNVIG00000018285) #28 ENSNVIG00000018309 #29 RAPGEF1 (ENSNVIG00000018310) #30 MED27 (ENSNVIG00000018350) #31 NTNG2 (ENSNVIG00000018391) #32 SETX (ENSNVIG00000018470) #33 TTF1 (ENSNVIG00000018501) #34 CFAP77 (ENSNVIG00000018524) #35 BARHL1 (ENSNVIG00000018540) #36 DDX31 (ENSNVIG00000018554) Ursidae ANCESTRAL SPECIES 6 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Ursus ANCESTRAL SPECIES 15 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00940000171485 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Polar bear MODERN SPECIES 214 TOR1B (ENSUMAG00000020225) #7 TOR1A (ENSUMAG00000020220) #8 C9orf78 (ENSUMAG00000020215) #9 ENSUMAG00000020209 #10 FNBP1 (ENSUMAG00000019252) #11 GPR107 (ENSUMAG00000019019) #12 ENSUMAG00000018981 ENSUMAG00000018959 ASS1 (ENSUMAG00000018929) #14 FUBP3 (ENSUMAG00000018745) #15 EXOSC2 (ENSUMAG00000018726) #17 ABL1 (ENSUMAG00000018694) #18 QRFP (ENSUMAG00000018686) #19 FIBCD1 (ENSUMAG00000018682) #20 LAMC3 (ENSUMAG00000018641) #21 AIF1L (ENSUMAG00000018626) #22 NUP214 (ENSUMAG00000018591) #23 FAM78A (ENSUMAG00000018578) #24 PRRC2B (ENSUMAG00000017561) #26 POMT1 (ENSUMAG00000017298) #27 UCK1 (ENSUMAG00000017233) #28 RAPGEF1 (ENSUMAG00000016922) #30 MED27 (ENSUMAG00000016856) #31 NTNG2 (ENSUMAG00000016843) #32 SETX (ENSUMAG00000016729) #33 TTF1 (ENSUMAG00000016720) #34 DDX31 (ENSUMAG00000016669) GTF3C4 (ENSUMAG00000016660) #37 AK8 (ENSUMAG00000016644) SPACA9 (ENSUMAG00000016626) ENSUMAG00000016623 American black bear MODERN SPECIES 11 ABL1 (ENSUAMG00000008042) #18 QRFP (ENSUAMG00000008052) #19 FIBCD1 (ENSUAMG00000008053) #20 LAMC3 (ENSUAMG00000008056) #21 AIF1L (ENSUAMG00000008058) #22 NUP214 (ENSUAMG00000008071) #23 FAM78A (ENSUAMG00000008430) #24 PLPP7 (ENSUAMG00000008431) #25 PRRC2B (ENSUAMG00000008467) #26 POMT1 (ENSUAMG00000008837) #27 UCK1 (ENSUAMG00000008845) #28 Giant Panda MODERN SPECIES 17 TOR1A (ENSAMEG00000016037) #8 C9orf78 (ENSAMEG00000016061) #9 USP20 (ENSAMEG00000016078) #10 FNBP1 (ENSAMEG00000016090) #11 GPR107 (ENSAMEG00000016130) #12 ENSAMEG00000016156 HMCN2 (ENSAMEG00000024751) ASS1 (ENSAMEG00000016184) #14 FUBP3 (ENSAMEG00000016193) #15 ENSAMEG00000016234 EXOSC2 (ENSAMEG00000016239) #17 ABL1 (ENSAMEG00000016250) #18 QRFP (ENSAMEG00000019125) #19 FIBCD1 (ENSAMEG00000016267) #20 LAMC3 (ENSAMEG00000016281) #21 AIF1L (ENSAMEG00000016276) #22 NUP214 (ENSAMEG00000016303) #23 FAM78A (ENSAMEG00000016348) #24 ENSAMEG00000031077 #25 PRRC2B (ENSAMEG00000016358) #26 POMT1 (ENSAMEG00000016384) #27 ENSAMEG00000016424 #28 ENSAMEG00000023674 #29 RAPGEF1 (ENSAMEG00000016435) #30 ENSAMEG00000026484 MED27 (ENSAMEG00000023998) #31 NTNG2 (ENSAMEG00000004056) #32 SETX (ENSAMEG00000004067) #33 TTF1 (ENSAMEG00000004093) #34 CFAP77 (ENSAMEG00000004104) #35 DDX31 (ENSAMEG00000004120) Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Equus ANCESTRAL SPECIES 30 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Donkey MODERN SPECIES 1 USP20 (ENSEASG00005008368) #10 FNBP1 (ENSEASG00005008374) #11 GPR107 (ENSEASG00005008388) #12 ENSEASG00005024781 HMCN2 (ENSEASG00005008402) ENSEASG00005032366 FUBP3 (ENSEASG00005008416) #15 PRDM12 (ENSEASG00005008472) #16 EXOSC2 (ENSEASG00005008475) #17 ENSEASG00005035304 ABL1 (ENSEASG00005008482) #18 QRFP (ENSEASG00005008487) #19 FIBCD1 (ENSEASG00005008491) #20 ENSEASG00005008549 LAMC3 (ENSEASG00005008508) #21 AIF1L (ENSEASG00005031622) #22 NUP214 (ENSEASG00005008585) #23 FAM78A (ENSEASG00005033020) #24 PLPP7 (ENSEASG00005009147) #25 PRRC2B (ENSEASG00005009152) #26 POMT1 (ENSEASG00005009219) #27 UCK1 (ENSEASG00005009579) #28 ENSEASG00005009581 PRRT1B (ENSEASG00005027000) #29 RAPGEF1 (ENSEASG00005009606) #30 ENSEASG00005025052 ENSEASG00005029732 #31 NTNG2 (ENSEASG00005009813) #32 SETX (ENSEASG00005009822) #33 TTF1 (ENSEASG00005009833) #34 CFAP77 (ENSEASG00005009838) #35 Horse MODERN SPECIES 17 C25H9orf78 (ENSECAG00000018958) #9 USP20 (ENSECAG00000008342) #10 FNBP1 (ENSECAG00000012905) #11 GPR107 (ENSECAG00000008964) #12 NCS1 (ENSECAG00000023051) #13 HMCN2 (ENSECAG00000023231) ASS1 (ENSECAG00000006717) #14 FUBP3 (ENSECAG00000011500) #15 ENSECAG00000046691 PRDM12 (ENSECAG00000005933) #16 EXOSC2 (ENSECAG00000007897) #17 ABL1 (ENSECAG00000014981) #18 FIBCD1 (ENSECAG00000024715) #20 LAMC3 (ENSECAG00000000296) #21 ENSECAG00000038468 AIF1L (ENSECAG00000026856) #22 ENSECAG00000050056 #23 NUP214 (ENSECAG00000022752) #23 FAM78A (ENSECAG00000010356) #24 PLPP7 (ENSECAG00000011314) #25 ENSECAG00000045292 #25 PRRC2B (ENSECAG00000013922) #26 POMT1 (ENSECAG00000024533) #27 UCK1 (ENSECAG00000015649) #28 PRRT1B (ENSECAG00000043912) #29 ENSECAG00000048983 RAPGEF1 (ENSECAG00000018775) #30 MED27 (ENSECAG00000022727) #31 NTNG2 (ENSECAG00000008808) #32 SETX (ENSECAG00000012019) #33 TTF1 (ENSECAG00000026979) #34 Chiroptera ANCESTRAL SPECIES 8 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Megabat MODERN SPECIES 1078 LAMC3 (ENSPVAG00000004227) #21 AIF1L (ENSPVAG00000004231) #22 NUP214 (ENSPVAG00000004232) #23 FAM78A (ENSPVAG00000004235) #24 PLPP7 (ENSPVAG00000004236) #25 PRRC2B (ENSPVAG00000004237) #26 POMT1 (ENSPVAG00000004244) #27 UCK1 (ENSPVAG00000004247) #28 Microchiroptera ANCESTRAL SPECIES 7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010021746 #7 C9orf78 (ENSRFEG00010021754) #9 USP20 (ENSRFEG00010021769) #10 FNBP1 (ENSRFEG00010021794) #11 GPR107 (ENSRFEG00010021829) #12 NCS1 (ENSRFEG00010021843) #13 HMCN2 (ENSRFEG00010021885) ASS1 (ENSRFEG00010021908) #14 FUBP3 (ENSRFEG00010021930) #15 PRDM12 (ENSRFEG00010021941) #16 EXOSC2 (ENSRFEG00010010327) #17 ABL1 (ENSRFEG00010010489) #18 QRFP (ENSRFEG00010010579) #19 FIBCD1 (ENSRFEG00010010611) #20 LAMC3 (ENSRFEG00010010761) #21 AIF1L (ENSRFEG00010010856) #22 NUP214 (ENSRFEG00010010980) #23 FAM78A (ENSRFEG00010011145) #24 PLPP7 (ENSRFEG00010011187) #25 PRRC2B (ENSRFEG00010011251) #26 POMT1 (ENSRFEG00010011466) #27 UCK1 (ENSRFEG00010011586) #28 PRRT1B (ENSRFEG00010011742) #29 RAPGEF1 (ENSRFEG00010011862) #30 MED27 (ENSRFEG00010012877) #31 NTNG2 (ENSRFEG00010013000) #32 SETX (ENSRFEG00010013062) #33 TTF1 (ENSRFEG00010013126) #34 CFAP77 (ENSRFEG00010013175) #35 BARHL1 (ENSRFEG00010013240) #36 DDX31 (ENSRFEG00010013285) Microbat MODERN SPECIES 1649 AIF1L (ENSMLUG00000004867) #22 NUP214 (ENSMLUG00000004875) #23 FAM78A (ENSMLUG00000004900) #24 PLPP7 (ENSMLUG00000014189) #25 PRRC2B (ENSMLUG00000001237) #26 POMT1 (ENSMLUG00000001249) #27 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Suina ANCESTRAL SPECIES 37 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Chacoan peccary MODERN SPECIES 887 C9orf78 (ENSCWAG00000008931) #9 USP20 (ENSCWAG00000008895) #10 FNBP1 (ENSCWAG00000008670) #11 GPR107 (ENSCWAG00000008440) #12 NCS1 (ENSCWAG00000008387) #13 HMCN2 (ENSCWAG00000007654) ASS1 (ENSCWAG00000007572) #14 ENSCWAG00000007549 FUBP3 (ENSCWAG00000007526) #15 PRDM12 (ENSCWAG00000007488) #16 EXOSC2 (ENSCWAG00000007402) #17 ABL1 (ENSCWAG00000007338) #18 QRFP (ENSCWAG00000007323) #19 FIBCD1 (ENSCWAG00000007262) #20 LAMC3 (ENSCWAG00000007153) #21 AIF1L (ENSCWAG00000007101) #22 NUP214 (ENSCWAG00000007015) #23 FAM78A (ENSCWAG00000006984) #24 PLPP7 (ENSCWAG00000006971) #25 PRRC2B (ENSCWAG00000006791) #26 POMT1 (ENSCWAG00000006722) #27 UCK1 (ENSCWAG00000006666) #28 RAPGEF1 (ENSCWAG00000006397) #30 MED27 (ENSCWAG00000006239) #31 NTNG2 (ENSCWAG00000006197) #32 SETX (ENSCWAG00000006034) #33 TTF1 (ENSCWAG00000005976) #34 CFAP77 (ENSCWAG00000005915) #35 BARHL1 (ENSCWAG00000005894) #36 DDX31 (ENSCWAG00000005734) GTF3C4 (ENSCWAG00000005692) #37 Pig MODERN SPECIES TOR1A (ENSSSCG00000034518) #8 C9orf78 (ENSSSCG00000030426) #9 USP20 (ENSSSCG00000024341) #10 FNBP1 (ENSSSCG00000005689) #11 GPR107 (ENSSSCG00000038868) #12 NCS1 (ENSSSCG00000039311) #13 HMCN2 (ENSSSCG00000005699) ASS1 (ENSSSCG00000005701) #14 FUBP3 (ENSSSCG00000005702) #15 PRDM12 (ENSSSCG00000005703) #16 EXOSC2 (ENSSSCG00000005704) #17 ABL1 (ENSSSCG00000005706) #18 QRFP (ENSSSCG00000005705) #19 FIBCD1 (ENSSSCG00000005707) #20 LAMC3 (ENSSSCG00000005710) #21 AIF1L (ENSSSCG00000034178) #22 NUP214 (ENSSSCG00000005711) #23 FAM78A (ENSSSCG00000028172) #24 PLPP7 (ENSSSCG00000005713) #25 PRRC2B (ENSSSCG00000005715) #26 POMT1 (ENSSSCG00000005716) #27 UCK1 (ENSSSCG00000005717) #28 PRRT1B (ENSSSCG00000031465) #29 RAPGEF1 (ENSSSCG00000005719) #30 MED27 (ENSSSCG00000005720) #31 NTNG2 (ENSSSCG00000005723) #32 SETX (ENSSSCG00000005724) #33 TTF1 (ENSSSCG00000005725) #34 CFAP77 (ENSSSCG00000005727) #35 BARHL1 (ENSSSCG00000005730) #36 DDX31 (ENSSSCG00000005729) Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Camelidae ANCESTRAL SPECIES 5 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Arabian camel MODERN SPECIES 30 C9orf78 (ENSCDRG00005000393) #9 ENSCDRG00005000380 USP20 (ENSCDRG00005000329) #10 FNBP1 (ENSCDRG00005000106) #11 GPR107 (ENSCDRG00005000042) #12 NCS1 (ENSCDRG00005008430) #13 HMCN2 (ENSCDRG00005007546) ASS1 (ENSCDRG00005007448) #14 FUBP3 (ENSCDRG00005007402) #15 ENSCDRG00005007345 EXOSC2 (ENSCDRG00005007174) #17 ABL1 (ENSCDRG00005006992) #18 QRFP (ENSCDRG00005006956) #19 FIBCD1 (ENSCDRG00005006893) #20 LAMC3 (ENSCDRG00005006663) #21 AIF1L (ENSCDRG00005006604) #22 NUP214 (ENSCDRG00005006401) #23 FAM78A (ENSCDRG00005006358) #24 PLPP7 (ENSCDRG00005006324) #25 PRRC2B (ENSCDRG00005006141) #26 POMT1 (ENSCDRG00005006084) #27 UCK1 (ENSCDRG00005006047) #28 RAPGEF1 (ENSCDRG00005004831) #30 MED27 (ENSCDRG00005004656) #31 NTNG2 (ENSCDRG00005004638) #32 SETX (ENSCDRG00005004571) #33 TTF1 (ENSCDRG00005004487) #34 ENSCDRG00005004468 CFAP77 (ENSCDRG00005004446) #35 BARHL1 (ENSCDRG00005004416) #36 DDX31 (ENSCDRG00005004319) Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Cetacea ANCESTRAL SPECIES 9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a.i #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Odontoceti_a ANCESTRAL SPECIES 19 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.i #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Dolphin MODERN SPECIES 479 LAMC3 (ENSTTRG00000003923) #21 AIF1L (ENSTTRG00000003925) #22 NUP214 (ENSTTRG00000003927) #23 FAM78A (ENSTTRG00000003930) #24 PLPP7 (ENSTTRG00000003931) #25 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.i #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000008195.c ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.i #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Beluga whale MODERN SPECIES 19 ENSDLEG00000008329 USP20 (ENSDLEG00000006766) #10 FNBP1 (ENSDLEG00000006640) #11 GPR107 (ENSDLEG00000006525) #12 ENSDLEG00000006497 ENSDLEG00000006488 HMCN2 (ENSDLEG00000006312) ASS1 (ENSDLEG00000006264) #14 FUBP3 (ENSDLEG00000006221) #15 PRDM12 (ENSDLEG00000006203) #16 EXOSC2 (ENSDLEG00000006167) #17 ABL1 (ENSDLEG00000006151) #18 ENSDLEG00000006144 #19 FIBCD1 (ENSDLEG00000006141) #20 LAMC3 (ENSDLEG00000005892) #21 AIF1L (ENSDLEG00000005829) #22 NUP214 (ENSDLEG00000005368) #23 FAM78A (ENSDLEG00000005303) #24 PLPP7 (ENSDLEG00000005296) #25 PRRC2B (ENSDLEG00000005193) #26 POMT1 (ENSDLEG00000005160) #27 UCK1 (ENSDLEG00000005153) #28 PRRT1B (ENSDLEG00000005148) #29 RAPGEF1 (ENSDLEG00000005079) #30 MED27 (ENSDLEG00000005036) #31 NTNG2 (ENSDLEG00000005024) #32 SETX (ENSDLEG00000005002) #33 TTF1 (ENSDLEG00000004956) #34 CFAP77 (ENSDLEG00000004940) #35 BARHL1 (ENSDLEG00000004938) #36 DDX31 (ENSDLEG00000004925) Narwhal MODERN SPECIES 312 C9orf78 (ENSMMNG00015013471) #9 USP20 (ENSMMNG00015013546) #10 FNBP1 (ENSMMNG00015013587) #11 GPR107 (ENSMMNG00015013685) #12 NCS1 (ENSMMNG00015013771) #13 ADI1 (ENSMMNG00015013790) HMCN2 (ENSMMNG00015013821) ASS1 (ENSMMNG00015013868) #14 FUBP3 (ENSMMNG00015013917) #15 PRDM12 (ENSMMNG00015013947) #16 EXOSC2 (ENSMMNG00015013973) #17 ABL1 (ENSMMNG00015014013) #18 QRFP (ENSMMNG00015014048) #19 FIBCD1 (ENSMMNG00015014057) #20 LAMC3 (ENSMMNG00015014088) #21 ENSMMNG00015014117 #22 NUP214 (ENSMMNG00015014156) #23 FAM78A (ENSMMNG00015014273) #24 PLPP7 (ENSMMNG00015014280) #25 PRRC2B (ENSMMNG00015014308) #26 POMT1 (ENSMMNG00015014401) #27 UCK1 (ENSMMNG00015014428) #28 PRRT1B (ENSMMNG00015014448) #29 RAPGEF1 (ENSMMNG00015014496) #30 MED27 (ENSMMNG00015014609) #31 NTNG2 (ENSMMNG00015014639) #32 SETX (ENSMMNG00015014662) #33 TTF1 (ENSMMNG00015014693) #34 CFAP77 (ENSMMNG00015014748) #35 BARHL1 (ENSMMNG00015014770) #36 DDX31 (ENSMMNG00015014795) Vaquita MODERN SPECIES 17 USP20 (ENSPSNG00000013440) #10 ENSPSNG00000013402 FNBP1 (ENSPSNG00000013220) #11 GPR107 (ENSPSNG00000013082) #12 ENSPSNG00000013006 NCS1 (ENSPSNG00000012964) #13 ENSPSNG00000012578 ASS1 (ENSPSNG00000012505) #14 FUBP3 (ENSPSNG00000012440) #15 PRDM12 (ENSPSNG00000012356) #16 EXOSC2 (ENSPSNG00000012232) #17 ABL1 (ENSPSNG00000012102) #18 QRFP (ENSPSNG00000012057) #19 FIBCD1 (ENSPSNG00000011963) #20 LAMC3 (ENSPSNG00000011907) #21 AIF1L (ENSPSNG00000011812) #22 NUP214 (ENSPSNG00000011681) #23 FAM78A (ENSPSNG00000011642) #24 PLPP7 (ENSPSNG00000011611) #25 ENSPSNG00000011577 #26 ENSPSNG00000011551 ENSPSNG00000011496 #26 POMT1 (ENSPSNG00000011380) #27 UCK1 (ENSPSNG00000011299) #28 PRRT1B (ENSPSNG00000011276) #29 RAPGEF1 (ENSPSNG00000010810) #30 MED27 (ENSPSNG00000010671) #31 NTNG2 (ENSPSNG00000010573) #32 SETX (ENSPSNG00000010504) #33 TTF1 (ENSPSNG00000010461) #34 CFAP77 (ENSPSNG00000010381) #35 Sperm whale MODERN SPECIES 4 TOR1A (ENSPCTG00005011264) #8 C13H9orf78 (ENSPCTG00005011213) #9 ENSPCTG00005011187 #10 FNBP1 (ENSPCTG00005010933) #11 GPR107 (ENSPCTG00005010615) #12 NCS1 (ENSPCTG00005010505) HMCN2 (ENSPCTG00005009610) ENSPCTG00005009553 #14 FUBP3 (ENSPCTG00005009513) #15 PRDM12 (ENSPCTG00005009360) #16 EXOSC2 (ENSPCTG00005009139) #17 ABL1 (ENSPCTG00005008970) #18 FIBCD1 (ENSPCTG00005008858) #20 ENSPCTG00005008829 #21 ENSPCTG00005008768 AIF1L (ENSPCTG00005008614) #22 NUP214 (ENSPCTG00005008339) #23 ENSPCTG00005008296 PRRC2B (ENSPCTG00005008198) #26 POMT1 (ENSPCTG00005008076) #27 UCK1 (ENSPCTG00005008011) #28 RAPGEF1 (ENSPCTG00005005974) #30 SETX (ENSPCTG00005005641) #33 ENSPCTG00005005608 ENSPCTG00005005572 #31 ENSPCTG00005005551 #32 ENSPCTG00005005541 #31 DDX31 (ENSPCTG00005005522) GTF3C4 (ENSPCTG00005005484) #37 AK8 (ENSPCTG00005005459) ENSPCTG00005005432 Odontoceti ANCESTRAL SPECIES 3 ENSGT00390000005666 ENSGT00940000155830 ENSGT00390000015750 ENSGT00940000155698.A ENSGT00390000016895 ENSGT00940000161956 ENSGT00390000017838 ENSGT01040000240674 ENSGT00940000154307.B ENSGT00940000160222 ENSGT00390000015743 ENSGT00940000160044 ENSGT00940000153861.a ENSGT00390000000324 ENSGT00940000161391 ENSGT00390000013846.a.a.j #22 ENSGT00390000001316 ENSGT00730000111241 ENSGT00390000000341 ENSGT00460000041594 ENSGT00550000074913 ENSGT00940000163734 ENSGT00940000156614.b ENSGT00940000162164 ENSGT00940000158717 ENSGT00950000183060.a.a ENSGT00940000163679 ENSGT00940000156018.B ENSGT00390000017551 ENSGT00530000063996.b ENSGT00940000157636 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00390000005666 ENSGT00940000155830 ENSGT00390000015750 ENSGT00940000155698.A ENSGT00390000016895 ENSGT00940000161956 ENSGT00390000017838 ENSGT01040000240674 ENSGT00940000154307.B ENSGT00940000160222 ENSGT00390000015743 ENSGT00940000160044 ENSGT00940000153861.a ENSGT00390000000324 ENSGT00940000161391 ENSGT00390000013846.a.a.j #22 ENSGT00390000001316 ENSGT00730000111241 ENSGT00390000000341 ENSGT00460000041594 ENSGT00550000074913 ENSGT00940000163734 ENSGT00940000156614.b ENSGT00940000162164 ENSGT00940000158717 ENSGT00950000183060.a.a ENSGT00940000163679 ENSGT00940000156018.B ENSGT00390000017551 ENSGT00530000063996.b ENSGT00940000157636 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000155830 ENSGT00390000015750 ENSGT00940000155698.A ENSGT00940000161956 ENSGT01040000240674 ENSGT00940000154307.B ENSGT00390000017838 ENSGT00940000161571 ENSGT00940000161420 ENSGT00940000160222 ENSGT00390000015743 ENSGT00940000160044 ENSGT00940000153861.a ENSGT00390000000324 ENSGT00940000161391 ENSGT00390000013846.a.a.j #22 ENSGT00390000001316 ENSGT00730000111241 ENSGT00390000000341 ENSGT00460000041594 ENSGT00550000074913 ENSGT00940000163734 ENSGT00940000156614.b ENSGT00940000162164 ENSGT00940000158717 ENSGT00950000183060.a.a ENSGT00940000163679 ENSGT00390000017551 ENSGT00530000063996.b ENSGT00940000157636 ENSGT00940000158573 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000155830 ENSGT00390000015750 ENSGT00940000155698.A ENSGT00940000161956 ENSGT00390000017838 ENSGT01040000240674 ENSGT00940000154307.B ENSGT00940000161571 ENSGT00940000161420 ENSGT00940000160222 ENSGT00390000015743 ENSGT00940000160044 ENSGT00940000153861.a ENSGT00390000000324 ENSGT00940000161391 ENSGT00390000013846.a.a.j #22 ENSGT00390000001316 ENSGT00730000111241 ENSGT00390000000341 ENSGT00460000041594 ENSGT00550000074913 ENSGT00940000163734 ENSGT00940000156614.b ENSGT00940000162164 ENSGT00940000158717 ENSGT00950000183060.a.a ENSGT00940000163679 ENSGT00940000156018.B ENSGT00390000017551 ENSGT00530000063996.b ENSGT00940000157636 Narwhal MODERN SPECIES 299 PRKAR1B (ENSMMNG00015002482) DNAAF5 (ENSMMNG00015002441) SUN1 (ENSMMNG00015002254) GET4 (ENSMMNG00015002170) ADAP1 (ENSMMNG00015002053) CYP2W1 (ENSMMNG00015001967) ENSMMNG00015001950 GPER1 (ENSMMNG00015001940) C7orf50 (ENSMMNG00015001909) MICALL2 (ENSMMNG00015001846) INTS1 (ENSMMNG00015001740) MAFK (ENSMMNG00015001688) TMEM184A (ENSMMNG00015001654) PSMG3 (ENSMMNG00015001629) ELFN1 (ENSMMNG00015001611) ENSMMNG00015001580 #22 MAD1L1 (ENSMMNG00015001514) MRM2 (ENSMMNG00015001492) NUDT1 (ENSMMNG00015001470) SNX8 (ENSMMNG00015001422) EIF3B (ENSMMNG00015001338) CHST12 (ENSMMNG00015001307) GRIFIN (ENSMMNG00015001288) LFNG (ENSMMNG00015001212) TTYH3 (ENSMMNG00015001133) IQCE (ENSMMNG00015000989) BRAT1 (ENSMMNG00015000870) AMZ1 (ENSMMNG00015000837) GNA12 (ENSMMNG00015000806) CARD11 (ENSMMNG00015000750) ENSMMNG00015000725 Sperm whale MODERN SPECIES 5 ENSPCTG00005004772 PRKAR1B (ENSPCTG00005004718) DNAAF5 (ENSPCTG00005004661) PDGFA (ENSPCTG00005004639) SUN1 (ENSPCTG00005004619) GPER1 (ENSPCTG00005004598) ENSPCTG00005004570 GPR146 (ENSPCTG00005004551) ENSPCTG00005004520 COX19 (ENSPCTG00005004496) ADAP1 (ENSPCTG00005004378) UNCX (ENSPCTG00005004352) MICALL2 (ENSPCTG00005004316) INTS1 (ENSPCTG00005004226) ELFN1 (ENSPCTG00005004192) ENSPCTG00005004182 #22 MAD1L1 (ENSPCTG00005021521) MRM2 (ENSPCTG00005021506) NUDT1 (ENSPCTG00005021499) SNX8 (ENSPCTG00005021471) EIF3B (ENSPCTG00005021368) ENSPCTG00005021318 CHST12 (ENSPCTG00005021305) GRIFIN (ENSPCTG00005021271) LFNG (ENSPCTG00005021209) TTYH3 (ENSPCTG00005021162) TMEM184A (ENSPCTG00005021137) MAFK (ENSPCTG00005021123) BRAT1 (ENSPCTG00005021063) AMZ1 (ENSPCTG00005020993) GNA12 (ENSPCTG00005020975) Blue whale MODERN SPECIES 17 USP20 (ENSBMSG00010018877) #10 FNBP1 (ENSBMSG00010018996) #11 GPR107 (ENSBMSG00010019745) #12 NCS1 (ENSBMSG00010019809) #13 HMCN2 (ENSBMSG00010019864) ASS1 (ENSBMSG00010020073) #14 FUBP3 (ENSBMSG00010020125) #15 PRDM12 (ENSBMSG00010020138) #16 EXOSC2 (ENSBMSG00010020163) #17 ENSBMSG00010020231 ABL1 (ENSBMSG00010020250) #18 QRFP (ENSBMSG00010020291) #19 FIBCD1 (ENSBMSG00010020307) #20 LAMC3 (ENSBMSG00010020344) #21 ENSBMSG00010020414 AIF1L (ENSBMSG00010020435) #22 NUP214 (ENSBMSG00010020505) #23 FAM78A (ENSBMSG00010020562) #24 PLPP7 (ENSBMSG00010020571) #25 PRRC2B (ENSBMSG00010020597) #26 POMT1 (ENSBMSG00010020652) #27 UCK1 (ENSBMSG00010020674) #28 RAPGEF1 (ENSBMSG00010020935) #30 ENSBMSG00010021721 MED27 (ENSBMSG00010021722) #31 NTNG2 (ENSBMSG00010021726) #32 SETX (ENSBMSG00010021728) #33 TTF1 (ENSBMSG00010021732) #34 CFAP77 (ENSBMSG00010021736) #35 BARHL1 (ENSBMSG00010021739) #36 DDX31 (ENSBMSG00010021741) Pecora ANCESTRAL SPECIES 5 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 15 ADA (ENSCHYG00000013810) CCN5 (ENSCHYG00000014072) KCNK15 (ENSCHYG00000014152) RIMS4 (ENSCHYG00000014187) YWHAB (ENSCHYG00000014260) PABPC1L (ENSCHYG00000014358) TOMM34 (ENSCHYG00000014616) STK4 (ENSCHYG00000014698) KCNS1 (ENSCHYG00000014860) ENSCHYG00000014887 ENSCHYG00000014941 SLPI (ENSCHYG00000014988) MATN4 (ENSCHYG00000015128) RBPJL (ENSCHYG00000016031) SDC4 (ENSCHYG00000016415) ENSCHYG00000016475 #22 ENSCHYG00000016524 ENSCHYG00000016609 DBNDD2 (ENSCHYG00000016669) PIGT (ENSCHYG00000016722) ENSCHYG00000017130 ENSCHYG00000017164 ENSCHYG00000017429 ENSCHYG00000017534 ENSCHYG00000017650 ENSCHYG00000017706 ENSCHYG00000017794 ENSCHYG00000017834 ENSCHYG00000017883 ENSCHYG00000017962 ENSCHYG00000018010 Yarkand deer MODERN SPECIES 2 TOR1A (ENSCHYG00000014636) #8 C9orf78 (ENSCHYG00000014673) #9 USP20 (ENSCHYG00000014904) #10 FNBP1 (ENSCHYG00000015180) #11 GPR107 (ENSCHYG00000017510) #12 ENSCHYG00000018457 HMCN2 (ENSCHYG00000018642) ASS1 (ENSCHYG00000019066) #14 FUBP3 (ENSCHYG00000019356) #15 PRDM12 (ENSCHYG00000020202) #16 EXOSC2 (ENSCHYG00000020290) #17 ABL1 (ENSCHYG00000020470) #18 QRFP (ENSCHYG00000020761) #19 FIBCD1 (ENSCHYG00000020798) #20 LAMC3 (ENSCHYG00000020895) #21 ENSCHYG00000021394 #22 NUP214 (ENSCHYG00000021576) #23 FAM78A (ENSCHYG00000022012) #24 PLPP7 (ENSCHYG00000022043) #25 PRRC2B (ENSCHYG00000022095) #26 POMT1 (ENSCHYG00000022562) #27 ENSCHYG00000022691 #28 RAPGEF1 (ENSCHYG00000022836) #30 MED27 (ENSCHYG00000023708) #31 NTNG2 (ENSCHYG00000023956) #32 SETX (ENSCHYG00000024123) #33 TTF1 (ENSCHYG00000024227) #34 CFAP77 (ENSCHYG00000024295) #35 BARHL1 (ENSCHYG00000024337) #36 DDX31 (ENSCHYG00000024361) GTF3C4 (ENSCHYG00000024487) #37 Percora_a ANCESTRAL SPECIES 27 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Siberian musk deer MODERN SPECIES 1178 TOR1A (ENSMMSG00000006335) #8 ENSMMSG00000006362 #9 USP20 (ENSMMSG00000006424) #10 FNBP1 (ENSMMSG00000006573) #11 GPR107 (ENSMMSG00000006768) #12 NCS1 (ENSMMSG00000006889) #13 HMCN2 (ENSMMSG00000006970) ASS1 (ENSMMSG00000007477) #14 FUBP3 (ENSMMSG00000007563) #15 PRDM12 (ENSMMSG00000007662) #16 EXOSC2 (ENSMMSG00000007712) #17 ABL1 (ENSMMSG00000007779) #18 QRFP (ENSMMSG00000007859) #19 FIBCD1 (ENSMMSG00000007871) #20 LAMC3 (ENSMMSG00000007962) #21 AIF1L (ENSMMSG00000008111) #22 NUP214 (ENSMMSG00000008157) #23 FAM78A (ENSMMSG00000008304) #24 PLPP7 (ENSMMSG00000008329) #25 PRRC2B (ENSMMSG00000008368) #26 POMT1 (ENSMMSG00000008544) #27 UCK1 (ENSMMSG00000008624) #28 RAPGEF1 (ENSMMSG00000008741) #30 MED27 (ENSMMSG00000009213) #31 NTNG2 (ENSMMSG00000009330) #32 SETX (ENSMMSG00000009473) #33 ENSMMSG00000009527 #34 CFAP77 (ENSMMSG00000009596) #35 BARHL1 (ENSMMSG00000009623) #36 DDX31 (ENSMMSG00000009648) GTF3C4 (ENSMMSG00000009716) #37 Bovidae ANCESTRAL SPECIES 5 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Caprinae ANCESTRAL SPECIES 27 ENSGT00390000009787 #9 ENSGT00390000009272.d ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Rambouillet Sheep MODERN SPECIES 19 TOR1A (ENSOARG00020001959) #8 C9orf78 (ENSOARG00020001935) #9 USP20 (ENSOARG00020001868) #10 FNBP1 (ENSOARG00020001812) #11 GPR107 (ENSOARG00020001668) #12 NCS1 (ENSOARG00020001618) #13 HMCN2 (ENSOARG00020001432) ASS1 (ENSOARG00020001391) #14 FUBP3 (ENSOARG00020001368) #15 PRDM12 (ENSOARG00020001340) #16 EXOSC2 (ENSOARG00020001181) #17 ABL1 (ENSOARG00020001107) #18 QRFP (ENSOARG00020001090) #19 FIBCD1 (ENSOARG00020001071) #20 LAMC3 (ENSOARG00020001023) #21 AIF1L (ENSOARG00020000990) #22 NUP214 (ENSOARG00020000785) #23 FAM78A (ENSOARG00020000746) #24 PLPP7 (ENSOARG00020000737) #25 PRRC2B (ENSOARG00020000660) #26 POMT1 (ENSOARG00020000540) #27 UCK1 (ENSOARG00020000489) #28 RAPGEF1 (ENSOARG00020000271) #30 MED27 (ENSOARG00020000195) #31 NTNG2 (ENSOARG00020000152) #32 TTF1 (ENSOARG00020017929) #34 CFAP77 (ENSOARG00020017851) #35 BARHL1 (ENSOARG00020017803) #36 DDX31 (ENSOARG00020017578) GTF3C4 (ENSOARG00020017513) #37 AK8 (ENSOARG00020017399) Goat MODERN SPECIES 2 C9orf78 (ENSCHIG00000027025) #9 ENSCHIG00000024518 USP20 (ENSCHIG00000017589) #10 FNBP1 (ENSCHIG00000027203) #11 GPR107 (ENSCHIG00000022854) #12 NCS1 (ENSCHIG00000017219) #13 HMCN2 (ENSCHIG00000017573) ASS1 (ENSCHIG00000017801) #14 FUBP3 (ENSCHIG00000027228) #15 PRDM12 (ENSCHIG00000025005) #16 EXOSC2 (ENSCHIG00000021398) #17 ABL1 (ENSCHIG00000021749) #18 QRFP (ENSCHIG00000010002) #19 FIBCD1 (ENSCHIG00000014267) #20 LAMC3 (ENSCHIG00000025745) #21 AIF1L (ENSCHIG00000009001) #22 NUP214 (ENSCHIG00000026201) #23 FAM78A (ENSCHIG00000012603) #24 PLPP7 (ENSCHIG00000017811) #25 PRRC2B (ENSCHIG00000019708) #26 POMT1 (ENSCHIG00000024383) #27 UCK1 (ENSCHIG00000011080) #28 RAPGEF1 (ENSCHIG00000017236) #30 MED27 (ENSCHIG00000022460) #31 NTNG2 (ENSCHIG00000013952) #32 SETX (ENSCHIG00000020740) #33 TTF1 (ENSCHIG00000016211) #34 CFAP77 (ENSCHIG00000022706) #35 BARHL1 (ENSCHIG00000024799) #36 DDX31 (ENSCHIG00000020011) GTF3C4 (ENSCHIG00000006949) #37 Bovinae ANCESTRAL SPECIES 4 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT01000000214793 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT01100000263569.a.a.b ENSGT00940000159729 #34 ENSGT00390000014476 #35 American bison MODERN SPECIES 3289 TOR1B (ENSBBBG00000024827) #7 TOR1A (ENSBBBG00000006539) #8 C9orf78 (ENSBBBG00000006821) #9 USP20 (ENSBBBG00000024987) #10 FNBP1 (ENSBBBG00000025211) #11 GPR107 (ENSBBBG00000025414) #12 NCS1 (ENSBBBG00000025501) #13 HMCN2 (ENSBBBG00000007921) ASS1 (ENSBBBG00000009513) #14 FUBP3 (ENSBBBG00000009524) #15 EXOSC2 (ENSBBBG00000009537) #17 ABL1 (ENSBBBG00000009543) #18 QRFP (ENSBBBG00000009545) #19 FIBCD1 (ENSBBBG00000009547) #20 LAMC3 (ENSBBBG00000009556) #21 AIF1L (ENSBBBG00000009560) #22 NUP214 (ENSBBBG00000001550) #23 FAM78A (ENSBBBG00000009591) #24 PLPP7 (ENSBBBG00000009593) #25 PRRC2B (ENSBBBG00000009620) #26 POMT1 (ENSBBBG00000009666) #27 UCK1 (ENSBBBG00000009682) #28 PRRT1B (ENSBBBG00000009687) #29 RAPGEF1 (ENSBBBG00000009731) #30 MED27 (ENSBBBG00000009741) #31 ENSBBBG00000009748 NTNG2 (ENSBBBG00000009755) #32 SETX (ENSBBBG00000009759) #33 ENSBBBG00000009760 ENSBBBG00000007875 #34 CFAP77 (ENSBBBG00000009763) #35 Bos ANCESTRAL SPECIES 5 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT01000000214793 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT01100000263569.a.a.b ENSGT00940000159729 #34 ENSGT00390000014476 #35 Bos_b ANCESTRAL SPECIES 16 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT01000000214793 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT01100000263569.a.a.a.a ENSGT00940000159729 #34 ENSGT00390000014476 #35 Cow MODERN SPECIES 2 TOR1A (ENSBTAG00000020305) #8 C11H9orf78 (ENSBTAG00000020307) #9 USP20 (ENSBTAG00000020311) #10 FNBP1 (ENSBTAG00000020313) #11 GPR107 (ENSBTAG00000004204) #12 NCS1 (ENSBTAG00000008726) #13 HMCN2 (ENSBTAG00000002319) ASS1 (ENSBTAG00000020747) #14 FUBP3 (ENSBTAG00000013072) #15 PRDM12 (ENSBTAG00000023797) #16 EXOSC2 (ENSBTAG00000048071) #17 ABL1 (ENSBTAG00000017976) #18 QRFP (ENSBTAG00000017980) #19 FIBCD1 (ENSBTAG00000017982) #20 LAMC3 (ENSBTAG00000017473) #21 AIF1L (ENSBTAG00000052140) #22 NUP214 (ENSBTAG00000021896) #23 FAM78A (ENSBTAG00000004542) #24 PLPP7 (ENSBTAG00000050974) #25 PRRC2B (ENSBTAG00000004400) #26 POMT1 (ENSBTAG00000010805) #27 UCK1 (ENSBTAG00000010810) #28 PRRT1B (ENSBTAG00000052831) #29 RAPGEF1 (ENSBTAG00000020791) #30 MED27 (ENSBTAG00000000382) #31 ENSBTAG00000053838 NTNG2 (ENSBTAG00000007235) #32 SETX (ENSBTAG00000024822) #33 TTF1 (ENSBTAG00000018710) #34 ENSBTAG00000023697 CFAP77 (ENSBTAG00000019254) #35 Hybrid Bos Indicus MODERN SPECIES 2 USP20 (ENSBIXG00005013251) #10 ENSBIXG00005013221 FNBP1 (ENSBIXG00005013167) #11 GPR107 (ENSBIXG00005012991) #12 NCS1 (ENSBIXG00005012934) #13 HMCN2 (ENSBIXG00005012879) ASS1 (ENSBIXG00005012814) #14 FUBP3 (ENSBIXG00005012728) #15 PRDM12 (ENSBIXG00005012689) #16 EXOSC2 (ENSBIXG00005012666) #17 ABL1 (ENSBIXG00005012576) #18 ENSBIXG00005001370 QRFP (ENSBIXG00005012518) #19 FIBCD1 (ENSBIXG00005012515) #20 LAMC3 (ENSBIXG00005012488) #21 AIF1L (ENSBIXG00005012437) #22 NUP214 (ENSBIXG00005001325) #23 FAM78A (ENSBIXG00005001315) #24 PLPP7 (ENSBIXG00005012351) #25 PRRC2B (ENSBIXG00005001295) #26 POMT1 (ENSBIXG00005001269) #27 UCK1 (ENSBIXG00005012183) #28 PRRT1B (ENSBIXG00005012138) #29 RAPGEF1 (ENSBIXG00005012047) #30 MED27 (ENSBIXG00005011937) #31 NTNG2 (ENSBIXG00005011889) #32 SETX (ENSBIXG00005011828) #33 TTF1 (ENSBIXG00005011724) #34 ENSBIXG00005011692 CFAP77 (ENSBIXG00005011671) #35 BARHL1 (ENSBIXG00005011650) #36 Bos_a ANCESTRAL SPECIES 23 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT01100000263569.a.a.b ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Domestic yak MODERN SPECIES 28 TOR1A (ENSBGRG00000019204) #8 C9orf78 (ENSBGRG00000019238) #9 USP20 (ENSBGRG00000006274) #10 ENSBGRG00000006503 FNBP1 (ENSBGRG00000006540) #11 GPR107 (ENSBGRG00000006768) #12 ENSBGRG00000007065 ASS1 (ENSBGRG00000008323) #14 FUBP3 (ENSBGRG00000008526) #15 PRDM12 (ENSBGRG00000008851) #16 EXOSC2 (ENSBGRG00000008961) #17 ABL1 (ENSBGRG00000009365) #18 QRFP (ENSBGRG00000009452) #19 FIBCD1 (ENSBGRG00000009501) #20 LAMC3 (ENSBGRG00000009568) #21 AIF1L (ENSBGRG00000009668) #22 NUP214 (ENSBGRG00000009838) #23 FAM78A (ENSBGRG00000012390) #24 PLPP7 (ENSBGRG00000012414) #25 PRRC2B (ENSBGRG00000012453) #26 POMT1 (ENSBGRG00000012652) #27 UCK1 (ENSBGRG00000012820) #28 RAPGEF1 (ENSBGRG00000013023) #30 MED27 (ENSBGRG00000013975) #31 NTNG2 (ENSBGRG00000014300) #32 SETX (ENSBGRG00000014400) #33 TTF1 (ENSBGRG00000014543) #34 CFAP77 (ENSBGRG00000014588) #35 BARHL1 (ENSBGRG00000014646) #36 DDX31 (ENSBGRG00000014697) GTF3C4 (ENSBGRG00000015208) #37 Wild yak MODERN SPECIES 1459 PRDM12 (ENSBMUG00000006080) #16 EXOSC2 (ENSBMUG00000006034) #17 ABL1 (ENSBMUG00000005981) #18 QRFP (ENSBMUG00000005940) #19 FIBCD1 (ENSBMUG00000005929) #20 LAMC3 (ENSBMUG00000005890) #21 AIF1L (ENSBMUG00000005863) #22 NUP214 (ENSBMUG00000005823) #23 FAM78A (ENSBMUG00000005751) #24 PLPP7 (ENSBMUG00000005732) #25 PRRC2B (ENSBMUG00000005654) #26 POMT1 (ENSBMUG00000005586) #27 UCK1 (ENSBMUG00000005508) #28 RAPGEF1 (ENSBMUG00000005421) #30 MED27 (ENSBMUG00000005194) #31 NTNG2 (ENSBMUG00000005163) #32 Eulipotyphla ANCESTRAL SPECIES 1641 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 Hedgehog MODERN SPECIES 3401 LAMC3 (ENSEEUG00000013808) #21 ENSEEUG00000013980 #22 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Glires ANCESTRAL SPECIES 9 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Lagomorpha ANCESTRAL SPECIES 119 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Rabbit MODERN SPECIES 497 ENSOCUG00000024109 #22 NUP214 (ENSOCUG00000001005) #23 ENSOCUG00000026627 FAM78A (ENSOCUG00000006768) #24 PLPP7 (ENSOCUG00000000944) #25 PRRC2B (ENSOCUG00000010830) #26 ENSOCUG00000015146 ENSOCUG00000039206 #27 ENSOCUG00000022260 #27 ENSOCUG00000011867 #28 PRRT1B (ENSOCUG00000033464) #29 RAPGEF1 (ENSOCUG00000000234) #30 MED27 (ENSOCUG00000013118) #31 NTNG2 (ENSOCUG00000000134) #32 SETX (ENSOCUG00000005616) #33 ENSOCUG00000005633 #34 Pika MODERN SPECIES 1061 FIBCD1 (ENSOPRG00000006560) #20 LAMC3 (ENSOPRG00000006567) #21 AIF1L (ENSOPRG00000006586) #22 NUP214 (ENSOPRG00000006594) #23 FAM78A (ENSOPRG00000006632) #24 ENSOPRG00000006639 #25 Rodentia ANCESTRAL SPECIES 9 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Sciuridae ANCESTRAL SPECIES 6 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Marmotini ANCESTRAL SPECIES 1 ENSGT00390000009787.c #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Marmotini_b ANCESTRAL SPECIES 2 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787.c #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Squirrel MODERN SPECIES 87 TOR1A (ENSSTOG00000020075) #8 ENSSTOG00000020630 #9 USP20 (ENSSTOG00000005418) #10 FNBP1 (ENSSTOG00000013583) #11 GPR107 (ENSSTOG00000024511) #12 ENSSTOG00000025494 ASS1 (ENSSTOG00000011597) #14 FUBP3 (ENSSTOG00000014105) #15 PRDM12 (ENSSTOG00000005986) #16 EXOSC2 (ENSSTOG00000005999) #17 ABL1 (ENSSTOG00000026819) #18 ENSSTOG00000014127 QRFP (ENSSTOG00000030261) #19 FIBCD1 (ENSSTOG00000003601) #20 LAMC3 (ENSSTOG00000011610) #21 AIF1L (ENSSTOG00000011627) #22 NUP214 (ENSSTOG00000011636) #23 FAM78A (ENSSTOG00000027424) #24 PLPP7 (ENSSTOG00000007982) #25 PRRC2B (ENSSTOG00000024364) #26 POMT1 (ENSSTOG00000004011) #27 UCK1 (ENSSTOG00000004058) #28 RAPGEF1 (ENSSTOG00000002466) #30 MED27 (ENSSTOG00000008925) #31 NTNG2 (ENSSTOG00000010575) #32 SETX (ENSSTOG00000021600) #33 TTF1 (ENSSTOG00000007957) #34 CFAP77 (ENSSTOG00000007973) #35 BARHL1 (ENSSTOG00000024230) #36 DDX31 (ENSSTOG00000007985) ENSSTOG00000004976 #37 Arctic ground squirrel MODERN SPECIES 44 TOR1A (ENSUPAG00010018233) #8 C9orf78 (ENSUPAG00010018240) #9 USP20 (ENSUPAG00010018244) #10 FNBP1 (ENSUPAG00010018326) #11 GPR107 (ENSUPAG00010019131) #12 NCS1 (ENSUPAG00010019150) #13 HMCN2 (ENSUPAG00010019173) ASS1 (ENSUPAG00010019269) #14 FUBP3 (ENSUPAG00010019280) #15 PRDM12 (ENSUPAG00010019289) #16 EXOSC2 (ENSUPAG00010019297) #17 ABL1 (ENSUPAG00010019305) #18 QRFP (ENSUPAG00010019319) #19 FIBCD1 (ENSUPAG00010019328) #20 LAMC3 (ENSUPAG00010019336) #21 AIF1L (ENSUPAG00010019397) #22 NUP214 (ENSUPAG00010019408) #23 FAM78A (ENSUPAG00010019454) #24 PLPP7 (ENSUPAG00010019458) #25 PRRC2B (ENSUPAG00010019495) #26 POMT1 (ENSUPAG00010023169) #27 UCK1 (ENSUPAG00010023170) #28 RAPGEF1 (ENSUPAG00010023174) #30 ENSUPAG00010023186 ENSUPAG00010023187 NEUROD4 (ENSUPAG00010023188) ENSUPAG00010023190 ENSUPAG00010023191 ENSUPAG00010023193 ENSUPAG00010023194 Alpin marmot MODERN SPECIES 47 TOR1B (ENSMMMG00000012963) #7 TOR1A (ENSMMMG00000012961) #8 C9orf78 (ENSMMMG00000012948) #9 USP20 (ENSMMMG00000012884) #10 FNBP1 (ENSMMMG00000012220) #11 GPR107 (ENSMMMG00000012179) #12 ENSMMMG00000012162 HMCN2 (ENSMMMG00000012024) ASS1 (ENSMMMG00000012003) #14 FUBP3 (ENSMMMG00000011935) #15 EXOSC2 (ENSMMMG00000011926) #17 ABL1 (ENSMMMG00000011924) #18 QRFP (ENSMMMG00000011895) #19 FIBCD1 (ENSMMMG00000011880) #20 LAMC3 (ENSMMMG00000011837) #21 AIF1L (ENSMMMG00000011817) #22 NUP214 (ENSMMMG00000011781) #23 FAM78A (ENSMMMG00000011780) #24 PLPP7 (ENSMMMG00000011773) #25 PRRC2B (ENSMMMG00000011717) #26 POMT1 (ENSMMMG00000011692) #27 UCK1 (ENSMMMG00000011656) #28 RAPGEF1 (ENSMMMG00000011529) #30 MED27 (ENSMMMG00000011517) #31 NTNG2 (ENSMMMG00000011377) #32 SETX (ENSMMMG00000011147) #33 TTF1 (ENSMMMG00000011133) #34 CFAP77 (ENSMMMG00000011095) #35 BARHL1 (ENSMMMG00000011083) #36 ENSMMMG00000011072 GTF3C4 (ENSMMMG00000011057) #37 Eurasian red squirrel MODERN SPECIES 6 TOR1A (ENSSVLG00005025074) #8 C9orf78 (ENSSVLG00005025097) #9 USP20 (ENSSVLG00005025130) #10 FNBP1 (ENSSVLG00005025181) #11 GPR107 (ENSSVLG00005025232) #12 NCS1 (ENSSVLG00005025273) #13 ENSSVLG00005025309 ASS1 (ENSSVLG00005025352) #14 FUBP3 (ENSSVLG00005025378) #15 PRDM12 (ENSSVLG00005025390) #16 EXOSC2 (ENSSVLG00005025425) #17 ABL1 (ENSSVLG00005025464) #18 QRFP (ENSSVLG00005025477) #19 FIBCD1 (ENSSVLG00005025486) #20 LAMC3 (ENSSVLG00005025507) #21 AIF1L (ENSSVLG00005025524) #22 NUP214 (ENSSVLG00005025553) #23 FAM78A (ENSSVLG00005025584) #24 PLPP7 (ENSSVLG00005025595) #25 PRRC2B (ENSSVLG00005025635) #26 POMT1 (ENSSVLG00005016596) #27 UCK1 (ENSSVLG00005016660) #28 PRRT1B (ENSSVLG00005016788) #29 RAPGEF1 (ENSSVLG00005016872) #30 MED27 (ENSSVLG00005017453) #31 ENSSVLG00005017582 NTNG2 (ENSSVLG00005017637) #32 SETX (ENSSVLG00005017731) #33 ENSSVLG00005017981 #34 CFAP77 (ENSSVLG00005018111) #35 BARHL1 (ENSSVLG00005018193) #36 Hystricomorpha ANCESTRAL SPECIES 7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Hystricomorpha_a ANCESTRAL SPECIES 5 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Hystricomorpha_b ANCESTRAL SPECIES 36 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Long-tailed chinchilla MODERN SPECIES 220 TOR1B (ENSCLAG00000008038) #7 TOR1A (ENSCLAG00000008135) #8 C9orf78 (ENSCLAG00000005362) #9 USP20 (ENSCLAG00000005589) #10 FNBP1 (ENSCLAG00000006794) #11 GPR107 (ENSCLAG00000008972) #12 ENSCLAG00000009788 ASS1 (ENSCLAG00000009951) #14 FUBP3 (ENSCLAG00000009005) #15 PRDM12 (ENSCLAG00000005499) #16 EXOSC2 (ENSCLAG00000006195) #17 ABL1 (ENSCLAG00000012898) #18 QRFP (ENSCLAG00000015339) #19 FIBCD1 (ENSCLAG00000016865) #20 LAMC3 (ENSCLAG00000011206) #21 AIF1L (ENSCLAG00000004225) #22 ENSCLAG00000005147 ENSCLAG00000005455 #23 FAM78A (ENSCLAG00000005607) #24 PLPP7 (ENSCLAG00000005966) #25 PRRC2B (ENSCLAG00000006317) #26 POMT1 (ENSCLAG00000005548) #27 UCK1 (ENSCLAG00000006376) #28 RAPGEF1 (ENSCLAG00000007111) #30 MED27 (ENSCLAG00000010715) #31 NTNG2 (ENSCLAG00000010283) #32 SETX (ENSCLAG00000012582) #33 ENSCLAG00000012676 #34 CFAP77 (ENSCLAG00000012901) #35 BARHL1 (ENSCLAG00000013082) #36 DDX31 (ENSCLAG00000008431) Degu MODERN SPECIES 164 ENSODEG00000017319 #9 USP20 (ENSODEG00000016809) #10 FNBP1 (ENSODEG00000016898) #11 GPR107 (ENSODEG00000016679) #12 NCS1 (ENSODEG00000016264) #13 HMCN2 (ENSODEG00000017140) ENSODEG00000016506 #14 ENSODEG00000016805 #15 ENSODEG00000016150 PRDM12 (ENSODEG00000016282) #16 ENSODEG00000016880 #17 ENSODEG00000016893 QRFP (ENSODEG00000017359) #19 FIBCD1 (ENSODEG00000016757) #20 LAMC3 (ENSODEG00000016310) #21 AIF1L (ENSODEG00000016484) #22 ENSODEG00000016268 ENSODEG00000016298 #23 FAM78A (ENSODEG00000016443) #24 ENSODEG00000016604 #25 PRRC2B (ENSODEG00000016621) #26 POMT1 (ENSODEG00000016799) #27 ENSODEG00000016290 #28 PRRT1B (ENSODEG00000016405) #29 RAPGEF1 (ENSODEG00000015868) #30 ENSODEG00000017667 #31 NTNG2 (ENSODEG00000015897) #32 ENSODEG00000016205 ENSODEG00000016387 #34 ENSODEG00000020330 CFAP77 (ENSODEG00000016491) #35 Guinea pig MODERN SPECIES 27 TOR1A (ENSCPOG00000009275) #8 C9orf78 (ENSCPOG00000009285) #9 USP20 (ENSCPOG00000026238) #10 FNBP1 (ENSCPOG00000001166) #11 GPR107 (ENSCPOG00000006007) #12 ENSCPOG00000030593 HMCN2 (ENSCPOG00000013220) ASS1 (ENSCPOG00000024091) #14 FUBP3 (ENSCPOG00000010315) #15 PRDM12 (ENSCPOG00000005901) #16 EXOSC2 (ENSCPOG00000005902) #17 ABL1 (ENSCPOG00000005903) #18 QRFP (ENSCPOG00000031430) #19 FIBCD1 (ENSCPOG00000006219) #20 LAMC3 (ENSCPOG00000004395) #21 AIF1L (ENSCPOG00000014734) #22 ENSCPOG00000003123 FAM78A (ENSCPOG00000033676) #24 PLPP7 (ENSCPOG00000036051) #25 PRRC2B (ENSCPOG00000009890) #26 POMT1 (ENSCPOG00000020217) #27 UCK1 (ENSCPOG00000038192) #28 PRRT1B (ENSCPOG00000022704) #29 RAPGEF1 (ENSCPOG00000009942) #30 MED27 (ENSCPOG00000038756) #31 NTNG2 (ENSCPOG00000024399) #32 SETX (ENSCPOG00000001492) #33 ENSCPOG00000021944 #34 CFAP77 (ENSCPOG00000033078) #35 BARHL1 (ENSCPOG00000025325) #36 DDX31 (ENSCPOG00000014243) Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000042396 #9 USP20 (ENSHGLG00000011412) #10 FNBP1 (ENSHGLG00000011382) #11 GPR107 (ENSHGLG00000018735) #12 NCS1 (ENSHGLG00000014153) #13 ENSHGLG00000041974 ASS1 (ENSHGLG00000010826) #14 FUBP3 (ENSHGLG00000014381) #15 PRDM12 (ENSHGLG00000013939) #16 EXOSC2 (ENSHGLG00000012834) #17 ENSHGLG00000034423 ENSHGLG00000037525 ABL1 (ENSHGLG00000011775) #18 QRFP (ENSHGLG00000043180) #19 FIBCD1 (ENSHGLG00000010751) #20 ENSHGLG00000043388 #22 NUP214 (ENSHGLG00000012544) #23 FAM78A (ENSHGLG00000049348) #24 PLPP7 (ENSHGLG00000010930) #25 PRRC2B (ENSHGLG00000010565) #26 ENSHGLG00000036647 POMT1 (ENSHGLG00000016861) #27 UCK1 (ENSHGLG00000014736) #28 PRRT1B (ENSHGLG00000014409) #29 RAPGEF1 (ENSHGLG00000012902) #30 MED27 (ENSHGLG00000011262) #31 NTNG2 (ENSHGLG00000012731) #32 SETX (ENSHGLG00000010385) #33 ENSHGLG00000013502 #34 CFAP77 (ENSHGLG00000012393) #35 BARHL1 (ENSHGLG00000011858) #36 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Myomorpha ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Muroidea ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Muroidea_A ANCESTRAL SPECIES 2 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Murinae ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Mus ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Mus_A ANCESTRAL SPECIES ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Mus_B ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Mus_C ANCESTRAL SPECIES ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Steppe mouse MODERN SPECIES 2816 Aif1l (ENSMSIG00000013349) #22 Nup214 (ENSMSIG00000013251) #23 Fam78a (ENSMSIG00000013241) #24 Plpp7 (ENSMSIG00000013232) #25 Prrc2b (ENSMSIG00000012975) #26 Pomt1 (ENSMSIG00000012907) #27 Uck1 (ENSMSIG00000012898) #28 ENSMSIG00000012879 Golga2 (ENSMSIG00000012785) Dnm1 (ENSMSIG00000012014) ENSMSIG00000011978 Ciz1 (ENSMSIG00000011610) ENSMSIG00000011594 Lcn2 (ENSMSIG00000011562) Ptges2 (ENSMSIG00000011545) ENSMSIG00000011540 spretus MODERN SPECIES 11 Tor1b (MGP_SPRETEiJ_G0024322) #7 BC005624 (MGP_SPRETEiJ_G0024323) #9 Usp20 (MGP_SPRETEiJ_G0024324) #10 Fnbp1 (MGP_SPRETEiJ_G0024325) #11 Gpr107 (MGP_SPRETEiJ_G0024326) #12 MGP_SPRETEiJ_G0024327 Hmcn2 (MGP_SPRETEiJ_G0024328) Ass1 (MGP_SPRETEiJ_G0024329) #14 Fubp3 (MGP_SPRETEiJ_G0024330) #15 Prdm12 (MGP_SPRETEiJ_G0024331) #16 Exosc2 (MGP_SPRETEiJ_G0024332) #17 Abl1 (MGP_SPRETEiJ_G0024333) #18 Qrfp (MGP_SPRETEiJ_G0024334) #19 Fibcd1 (MGP_SPRETEiJ_G0024335) #20 Lamc3 (MGP_SPRETEiJ_G0024336) #21 Aif1l (MGP_SPRETEiJ_G0024337) #22 Nup214 (MGP_SPRETEiJ_G0024338) #23 Fam78a (MGP_SPRETEiJ_G0024339) #24 Plpp7 (MGP_SPRETEiJ_G0024340) #25 Prrc2b (MGP_SPRETEiJ_G0024341) #26 Pomt1 (MGP_SPRETEiJ_G0024342) #27 Uck1 (MGP_SPRETEiJ_G0024343) #28 Swi5 (MGP_SPRETEiJ_G0024344) Golga2 (MGP_SPRETEiJ_G0024345) Dnm1 (MGP_SPRETEiJ_G0024346) Ciz1 (MGP_SPRETEiJ_G0024347) Bbln (MGP_SPRETEiJ_G0024348) Lcn2 (MGP_SPRETEiJ_G0024349) Ptges2 (MGP_SPRETEiJ_G0024350) Slc25a25 (MGP_SPRETEiJ_G0024351) Naif1 (MGP_SPRETEiJ_G0024352) Mouse MODERN SPECIES 11 BC005624 (ENSMUSG00000026851) #9 Usp20 (ENSMUSG00000026854) #10 Fnbp1 (ENSMUSG00000075415) #11 Gpr107 (ENSMUSG00000000194) #12 Ncs1 (ENSMUSG00000062661) #13 Hmcn2 (ENSMUSG00000055632) Ass1 (ENSMUSG00000076441) #14 Fubp3 (ENSMUSG00000026843) #15 Prdm12 (ENSMUSG00000079466) #16 Exosc2 (ENSMUSG00000039356) #17 Abl1 (ENSMUSG00000026842) #18 Gm56303 (ENSMUSG00000118600) Qrfp (ENSMUSG00000043102) #19 Fibcd1 (ENSMUSG00000026841) #20 Lamc3 (ENSMUSG00000026840) #21 Aif1l (ENSMUSG00000001864) #22 Nup214 (ENSMUSG00000001855) #23 Fam78a (ENSMUSG00000050592) #24 Plpp7 (ENSMUSG00000051373) #25 Prrc2b (ENSMUSG00000039262) #26 Pomt1 (ENSMUSG00000039254) #27 Uck1 (ENSMUSG00000002550) #28 Swi5 (ENSMUSG00000044627) Golga2 (ENSMUSG00000002546) Dnm1 (ENSMUSG00000026825) Ciz1 (ENSMUSG00000039205) Bbln (ENSMUSG00000039195) Lcn2 (ENSMUSG00000026822) Ptges2 (ENSMUSG00000026820) Slc25a25 (ENSMUSG00000026819) Naif1 (ENSMUSG00000039164) Ryukyu mouse MODERN SPECIES 11 Tor1a (MGP_CAROLIEiJ_G0023405) #8 BC005624 (MGP_CAROLIEiJ_G0023406) #9 Usp20 (MGP_CAROLIEiJ_G0023407) #10 Fnbp1 (MGP_CAROLIEiJ_G0023408) #11 Gpr107 (MGP_CAROLIEiJ_G0023409) #12 Ncs1 (MGP_CAROLIEiJ_G0023410) #13 Hmcn2 (MGP_CAROLIEiJ_G0023411) MGP_CAROLIEiJ_G0023412 #14 Fubp3 (MGP_CAROLIEiJ_G0023413) #15 Prdm12 (MGP_CAROLIEiJ_G0023414) #16 Exosc2 (MGP_CAROLIEiJ_G0023415) #17 Abl1 (MGP_CAROLIEiJ_G0023416) #18 Qrfp (MGP_CAROLIEiJ_G0023417) #19 Fibcd1 (MGP_CAROLIEiJ_G0023418) #20 Lamc3 (MGP_CAROLIEiJ_G0023419) #21 Aif1l (MGP_CAROLIEiJ_G0023420) #22 Nup214 (MGP_CAROLIEiJ_G0023421) #23 Fam78a (MGP_CAROLIEiJ_G0023422) #24 Plpp7 (MGP_CAROLIEiJ_G0023423) #25 Prrc2b (MGP_CAROLIEiJ_G0023424) #26 Pomt1 (MGP_CAROLIEiJ_G0023425) #27 Uck1 (MGP_CAROLIEiJ_G0023426) #28 Swi5 (MGP_CAROLIEiJ_G0023427) Golga2 (MGP_CAROLIEiJ_G0023428) Dnm1 (MGP_CAROLIEiJ_G0023429) Ciz1 (MGP_CAROLIEiJ_G0023430) Bbln (MGP_CAROLIEiJ_G0023431) MGP_CAROLIEiJ_G0023432 Ptges2 (MGP_CAROLIEiJ_G0023433) Slc25a25 (MGP_CAROLIEiJ_G0023434) Naif1 (MGP_CAROLIEiJ_G0023435) Shrew mouse MODERN SPECIES 16 Tor1a (MGP_PahariEiJ_G0024862) #8 BC005624 (MGP_PahariEiJ_G0024863) #9 Usp20 (MGP_PahariEiJ_G0024864) #10 Fnbp1 (MGP_PahariEiJ_G0024865) #11 Gpr107 (MGP_PahariEiJ_G0024866) #12 Ncs1 (MGP_PahariEiJ_G0024867) #13 MGP_PahariEiJ_G0024868 Ass1 (MGP_PahariEiJ_G0024869) #14 Fubp3 (MGP_PahariEiJ_G0024870) #15 Prdm12 (MGP_PahariEiJ_G0024871) #16 Exosc2 (MGP_PahariEiJ_G0024872) #17 Abl1 (MGP_PahariEiJ_G0024873) #18 Qrfp (MGP_PahariEiJ_G0024874) #19 Fibcd1 (MGP_PahariEiJ_G0024875) #20 Lamc3 (MGP_PahariEiJ_G0024876) #21 Aif1l (MGP_PahariEiJ_G0024877) #22 Nup214 (MGP_PahariEiJ_G0024878) #23 Fam78a (MGP_PahariEiJ_G0024879) #24 Plpp7 (MGP_PahariEiJ_G0024880) #25 Prrc2b (MGP_PahariEiJ_G0024881) #26 Pomt1 (MGP_PahariEiJ_G0024882) #27 Uck1 (MGP_PahariEiJ_G0024883) #28 MGP_PahariEiJ_G0024884 Golga2 (MGP_PahariEiJ_G0024885) Dnm1 (MGP_PahariEiJ_G0024886) Ciz1 (MGP_PahariEiJ_G0024887) Bbln (MGP_PahariEiJ_G0024888) MGP_PahariEiJ_G0024889 Ptges2 (MGP_PahariEiJ_G0024890) Slc25a25 (MGP_PahariEiJ_G0024891) Naif1 (MGP_PahariEiJ_G0024892) Rat MODERN SPECIES 13 C3h9orf78 (ENSRNOG00000007532) #9 Usp20 (ENSRNOG00000007710) #10 Fnbp1 (ENSRNOG00000008258) #11 Gpr107 (ENSRNOG00000023589) #12 Ncs1 (ENSRNOG00000064701) LOC103691761 (ENSRNOG00000062268) Hmcn2 (ENSRNOG00000064166) Ass1 (ENSRNOG00000008837) #14 Fubp3 (ENSRNOG00000009139) #15 Prdm12 (ENSRNOG00000009218) #16 Exosc2 (ENSRNOG00000009245) #17 Abl1 (ENSRNOG00000047356) #18 Qrfp (ENSRNOG00000046473) #19 Fibcd1 (ENSRNOG00000009735) #20 Lamc3 (ENSRNOG00000059507) #21 Aif1l (ENSRNOG00000009951) #22 Nup214 (ENSRNOG00000023393) #23 Fam78a (ENSRNOG00000023352) #24 Plpp7 (ENSRNOG00000010068) #25 Prrc2b (ENSRNOG00000010217) #26 Pomt1 (ENSRNOG00000010477) #27 Uck1 (ENSRNOG00000011467) #28 Swi5 (ENSRNOG00000022860) Golga2 (ENSRNOG00000011884) Dnm1 (ENSRNOG00000033835) Ciz1 (ENSRNOG00000013442) Bbln (ENSRNOG00000022681) Lcn2 (ENSRNOG00000013973) Ptges2 (ENSRNOG00000014050) Slc25a25 (ENSRNOG00000014338) Naif1 (ENSRNOG00000050204) Cricetidae ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Cricetinae ANCESTRAL SPECIES 1 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Golden Hamster MODERN SPECIES 906 Aif1l (ENSMAUG00000008893) #22 Nup214 (ENSMAUG00000013364) #23 Fam78a (ENSMAUG00000009887) #24 Plpp7 (ENSMAUG00000002309) #25 Prrc2b (ENSMAUG00000010542) #26 Pomt1 (ENSMAUG00000014110) #27 Uck1 (ENSMAUG00000005913) #28 Swi5 (ENSMAUG00000000780) Golga2 (ENSMAUG00000019551) Dnm1 (ENSMAUG00000007517) ENSMAUG00000005759 ENSMAUG00000015443 Bbln (ENSMAUG00000008053) ENSMAUG00000013260 Ptges2 (ENSMAUG00000017701) Slc25a25 (ENSMAUG00000016681) Chinese hamster chok1gshd MODERN SPECIES 188 Tor1a (ENSCGRG00001024352) #8 BC005624 (ENSCGRG00001024600) #9 Usp20 (ENSCGRG00001007813) #10 Fnbp1 (ENSCGRG00001023502) #11 Gpr107 (ENSCGRG00001021890) #12 Ncs1 (ENSCGRG00001023742) #13 Hmcn2 (ENSCGRG00001013838) Ass1 (ENSCGRG00001024543) #14 Fubp3 (ENSCGRG00001011076) #15 Prdm12 (ENSCGRG00001015005) #16 Exosc2 (ENSCGRG00001013981) #17 Abl1 (ENSCGRG00001024699) #18 Qrfp (ENSCGRG00001002494) #19 Fibcd1 (ENSCGRG00001015213) #20 Lamc3 (ENSCGRG00001012684) #21 Aif1l (ENSCGRG00001005912) #22 Nup214 (ENSCGRG00001002215) #23 Fam78a (ENSCGRG00001004596) #24 Plpp7 (ENSCGRG00001007465) #25 Prrc2b (ENSCGRG00001013428) #26 Pomt1 (ENSCGRG00001019065) #27 ENSCGRG00001004922 #28 Swi5 (ENSCGRG00001005842) Golga2 (ENSCGRG00001024588) Dnm1 (ENSCGRG00001011557) Ciz1 (ENSCGRG00001014777) Bbln (ENSCGRG00001011837) Lcn2 (ENSCGRG00001012253) Ptges2 (ENSCGRG00001013052) Slc25a25 (ENSCGRG00001023236) Naif1 (ENSCGRG00001017489) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00390000009349 ENSGT00530000062932.d ENSGT00940000155214 ENSGT00440000039084 ENSGT00390000001761 ENSGT01050000244868.b.a ENSGT00390000000224 ENSGT00940000157207 ENSGT00450000040324.b Northern American deer mouse MODERN SPECIES 17 BC005624 (ENSPEMG00000013405) #9 Usp20 (ENSPEMG00000017617) #10 Fnbp1 (ENSPEMG00000005382) #11 Gpr107 (ENSPEMG00000011641) #12 Ncs1 (ENSPEMG00000009081) #13 Hmcn2 (ENSPEMG00000011093) Ass1 (ENSPEMG00000017238) #14 Fubp3 (ENSPEMG00000019195) #15 Prdm12 (ENSPEMG00000009969) #16 Exosc2 (ENSPEMG00000006345) #17 ENSPEMG00000001904 Abl1 (ENSPEMG00000024677) #18 Qrfp (ENSPEMG00000009404) #19 Fibcd1 (ENSPEMG00000028513) #20 Lamc3 (ENSPEMG00000004694) #21 Aif1l (ENSPEMG00000006941) #22 Nup214 (ENSPEMG00000009581) #23 Fam78a (ENSPEMG00000025215) #24 Plpp7 (ENSPEMG00000029234) #25 Prrc2b (ENSPEMG00000006196) #26 Pomt1 (ENSPEMG00000011414) #27 Uck1 (ENSPEMG00000008608) #28 Swi5 (ENSPEMG00000001958) Golga2 (ENSPEMG00000010366) Dnm1 (ENSPEMG00000012357) Ciz1 (ENSPEMG00000002769) Bbln (ENSPEMG00000024928) Lcn2 (ENSPEMG00000007881) Ptges2 (ENSPEMG00000014378) Slc25a25 (ENSPEMG00000009683) Naif1 (ENSPEMG00000029493) Prairie vole MODERN SPECIES 12 Usp20 (ENSMOCG00000007792) #10 ENSMOCG00000018660 Fnbp1 (ENSMOCG00000015891) #11 Gpr107 (ENSMOCG00000004618) #12 Ncs1 (ENSMOCG00000019199) #13 Hmcn2 (ENSMOCG00000021220) ENSMOCG00000014563 #14 ENSMOCG00000001087 Fubp3 (ENSMOCG00000005635) #15 Prdm12 (ENSMOCG00000021026) #16 Exosc2 (ENSMOCG00000008262) #17 ENSMOCG00000006542 #18 Qrfp (ENSMOCG00000022423) #19 Fibcd1 (ENSMOCG00000022095) #20 Lamc3 (ENSMOCG00000021265) #21 Aif1l (ENSMOCG00000017527) #22 Nup214 (ENSMOCG00000022169) #23 Fam78a (ENSMOCG00000016168) #24 Plpp7 (ENSMOCG00000014865) #25 Prrc2b (ENSMOCG00000007990) #26 Pomt1 (ENSMOCG00000022108) #27 Uck1 (ENSMOCG00000021975) #28 Swi5 (ENSMOCG00000016692) Golga2 (ENSMOCG00000004584) Dnm1 (ENSMOCG00000012359) ENSMOCG00000009560 Bbln (ENSMOCG00000006322) Lcn2 (ENSMOCG00000017240) Ptges2 (ENSMOCG00000011339) Slc25a25 (ENSMOCG00000015194) Naif1 (ENSMOCG00000005018) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 513 Tor1a (ENSNGAG00000008009) #8 BC005624 (ENSNGAG00000004959) #9 ENSNGAG00000007690 #10 Fnbp1 (ENSNGAG00000012937) #11 Gpr107 (ENSNGAG00000011379) #12 Ncs1 (ENSNGAG00000014453) #13 Hmcn2 (ENSNGAG00000000330) Ass1 (ENSNGAG00000001086) #14 Fubp3 (ENSNGAG00000016562) #15 Prdm12 (ENSNGAG00000018480) #16 Exosc2 (ENSNGAG00000019383) #17 ENSNGAG00000015019 Qrfp (ENSNGAG00000014842) #19 Fibcd1 (ENSNGAG00000012641) #20 Lamc3 (ENSNGAG00000014328) #21 ENSNGAG00000008685 #22 ENSNGAG00000003978 ENSNGAG00000000413 Fam78a (ENSNGAG00000015817) #24 Plpp7 (ENSNGAG00000014073) #25 Prrc2b (ENSNGAG00000000491) #26 Pomt1 (ENSNGAG00000008179) #27 Uck1 (ENSNGAG00000016330) #28 ENSNGAG00000010814 Golga2 (ENSNGAG00000001473) Dnm1 (ENSNGAG00000005939) ENSNGAG00000016410 Bbln (ENSNGAG00000009999) ENSNGAG00000016092 Ptges2 (ENSNGAG00000019435) Slc25a25 (ENSNGAG00000002312) Upper Galilee mountains blind mole rat MODERN SPECIES 1044 ENSNGAG00000015072 #22 Alas2 (ENSNGAG00000014787) Apex2 (ENSNGAG00000013576) Pfkfb1 (ENSNGAG00000012590) ENSNGAG00000011855 Maged2 (ENSNGAG00000010942) Gnl3l (ENSNGAG00000005965) Fgd1 (ENSNGAG00000000668) Tsr2 (ENSNGAG00000021351) Lesser Egyptian jerboa MODERN SPECIES 216 ENSJJAG00000018480 #10 Fnbp1 (ENSJJAG00000014760) #11 Gpr107 (ENSJJAG00000011368) #12 ENSJJAG00000006586 Hmcn2 (ENSJJAG00000015957) Ass1 (ENSJJAG00000012217) #14 ENSJJAG00000011740 Fubp3 (ENSJJAG00000009992) #15 Prdm12 (ENSJJAG00000005424) #16 Exosc2 (ENSJJAG00000003188) #17 ENSJJAG00000002376 ENSJJAG00000001721 Qrfp (ENSJJAG00000000766) #19 Fibcd1 (ENSJJAG00000000435) #20 Lamc3 (ENSJJAG00000024108) #21 Aif1l (ENSJJAG00000016566) #22 Kangaroo rat MODERN SPECIES 374 Tor1a (ENSDORG00000000780) #8 BC005624 (ENSDORG00000000781) #9 Usp20 (ENSDORG00000000782) #10 Fnbp1 (ENSDORG00000000783) #11 Gpr107 (ENSDORG00000006286) #12 ENSDORG00000013807 Hmcn2 (ENSDORG00000027158) Ass1 (ENSDORG00000010865) #14 ENSDORG00000030247 #15 ENSDORG00000027073 Exosc2 (ENSDORG00000009238) #17 ENSDORG00000026471 Qrfp (ENSDORG00000006119) #19 Fibcd1 (ENSDORG00000001517) #20 Lamc3 (ENSDORG00000014599) #21 Aif1l (ENSDORG00000003641) #22 ENSDORG00000028083 ENSDORG00000027131 #23 Fam78a (ENSDORG00000027116) #24 Plpp7 (ENSDORG00000007637) #25 Prrc2b (ENSDORG00000005945) #26 Pomt1 (ENSDORG00000014415) #27 Uck1 (ENSDORG00000025358) #28 Rapgef1 (ENSDORG00000003580) #30 Med27 (ENSDORG00000014279) #31 Ntng2 (ENSDORG00000015371) #32 ENSDORG00000030223 Cfap77 (ENSDORG00000008723) #35 ENSDORG00000025192 #36 Ddx31 (ENSDORG00000005071) Gtf3c4 (ENSDORG00000005077) #37 Primates ANCESTRAL SPECIES 9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 202 FNBP1 (ENSOGAG00000034453) #11 GPR107 (ENSOGAG00000009786) #12 ENSOGAG00000024831 ENSOGAG00000026068 ENSOGAG00000031371 ENSOGAG00000028509 ENSOGAG00000026452 ASS1 (ENSOGAG00000028692) #14 FUBP3 (ENSOGAG00000007555) #15 PRDM12 (ENSOGAG00000007557) #16 EXOSC2 (ENSOGAG00000007558) #17 ABL1 (ENSOGAG00000007562) #18 QRFP (ENSOGAG00000031928) #19 FIBCD1 (ENSOGAG00000007565) #20 LAMC3 (ENSOGAG00000016745) #21 ENSOGAG00000016759 #22 ENSOGAG00000034525 NUP214 (ENSOGAG00000016762) #23 FAM78A (ENSOGAG00000034553) #24 PLPP7 (ENSOGAG00000000761) #25 PRRC2B (ENSOGAG00000012796) #26 POMT1 (ENSOGAG00000012801) #27 ENSOGAG00000028797 #28 RAPGEF1 (ENSOGAG00000004147) #30 MED27 (ENSOGAG00000004158) #31 NTNG2 (ENSOGAG00000028768) #32 SETX (ENSOGAG00000013387) #33 TTF1 (ENSOGAG00000009611) #34 CFAP77 (ENSOGAG00000004070) #35 BARHL1 (ENSOGAG00000004071) #36 DDX31 (ENSOGAG00000004072) Bushbaby MODERN SPECIES 128 ENSOGAG00000032096 TMEM169 (ENSOGAG00000004438) PECR (ENSOGAG00000004437) MREG (ENSOGAG00000002252) FN1 (ENSOGAG00000005042) ATIC (ENSOGAG00000005039) ABCA12 (ENSOGAG00000016828) BARD1 (ENSOGAG00000009078) VWC2L (ENSOGAG00000004042) IKZF2 (ENSOGAG00000016680) ENSOGAG00000010768 ENSOGAG00000028178 CPS1 (ENSOGAG00000005623) LANCL1 (ENSOGAG00000005620) MYL1 (ENSOGAG00000009848) ENSOGAG00000027184 #22 ACADL (ENSOGAG00000009844) KANSL1L (ENSOGAG00000002780) ENSOGAG00000002778 UNC80 (ENSOGAG00000002771) ENSOGAG00000025605 ENSOGAG00000024989 PTH2R (ENSOGAG00000007106) PIKFYVE (ENSOGAG00000014853) IDH1 (ENSOGAG00000014848) C2orf80 (ENSOGAG00000014847) ENSOGAG00000014842 CRYGC (ENSOGAG00000014846) CRYGD (ENSOGAG00000025720) ENSOGAG00000031316 ENSOGAG00000031869 Lemuriformes ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Lemuriformes_a ANCESTRAL SPECIES 2 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Greater bamboo lemur MODERN SPECIES 638 TOR1B (ENSPSMG00000019444) #7 TOR1A (ENSPSMG00000019434) #8 C9orf78 (ENSPSMG00000019422) #9 USP20 (ENSPSMG00000019349) #10 FNBP1 (ENSPSMG00000019223) #11 GPR107 (ENSPSMG00000019182) #12 HMCN2 (ENSPSMG00000019168) ASS1 (ENSPSMG00000019105) #14 FUBP3 (ENSPSMG00000019055) #15 PRDM12 (ENSPSMG00000019030) #16 EXOSC2 (ENSPSMG00000018996) #17 ABL1 (ENSPSMG00000018845) #18 QRFP (ENSPSMG00000018767) #19 FIBCD1 (ENSPSMG00000018761) #20 LAMC3 (ENSPSMG00000018744) #21 AIF1L (ENSPSMG00000018725) #22 ENSPSMG00000018705 NUP214 (ENSPSMG00000018673) #23 FAM78A (ENSPSMG00000018576) #24 PLPP7 (ENSPSMG00000018572) #25 PRRC2B (ENSPSMG00000018172) #26 POMT1 (ENSPSMG00000017780) #27 UCK1 (ENSPSMG00000017613) #28 Coquerels sifaka MODERN SPECIES 168 TOR1A (ENSPCOG00000020399) #8 C9orf78 (ENSPCOG00000026688) #9 USP20 (ENSPCOG00000017362) #10 FNBP1 (ENSPCOG00000018475) #11 GPR107 (ENSPCOG00000024575) #12 NCS1 (ENSPCOG00000023614) #13 HMCN2 (ENSPCOG00000020292) ASS1 (ENSPCOG00000016448) #14 FUBP3 (ENSPCOG00000022783) #15 PRDM12 (ENSPCOG00000022255) #16 EXOSC2 (ENSPCOG00000017639) #17 ENSPCOG00000027435 ABL1 (ENSPCOG00000028751) #18 FIBCD1 (ENSPCOG00000027218) #20 LAMC3 (ENSPCOG00000026068) #21 AIF1L (ENSPCOG00000027281) #22 NUP214 (ENSPCOG00000008758) #23 FAM78A (ENSPCOG00000024114) #24 PLPP7 (ENSPCOG00000013402) #25 ENSPCOG00000023940 #26 POMT1 (ENSPCOG00000024209) #27 UCK1 (ENSPCOG00000015238) #28 PRRT1B (ENSPCOG00000020619) #29 RAPGEF1 (ENSPCOG00000002269) #30 MED27 (ENSPCOG00000009676) #31 NTNG2 (ENSPCOG00000025244) #32 SETX (ENSPCOG00000022383) #33 ENSPCOG00000020045 #34 CFAP77 (ENSPCOG00000009926) #35 BARHL1 (ENSPCOG00000009751) #36 DDX31 (ENSPCOG00000010431) Haplorrhini ANCESTRAL SPECIES 9 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Tarsier MODERN SPECIES 4272 LAMC3 (ENSTSYG00000000408) #21 AIF1L (ENSTSYG00000030996) #22 NUP214 (ENSTSYG00000013176) #23 Simiiformes ANCESTRAL SPECIES 11 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a #14 ENSGT00940000165095 ENSGT00390000004524.d #14 ENSGT00390000004524.c.a.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.b.a #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Cebidae ANCESTRAL SPECIES 7 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.b.a #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Cebidae_a ANCESTRAL SPECIES 76 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.b.a #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Capuchin MODERN SPECIES 254 C9orf78 (ENSCCAG00000031507) #9 USP20 (ENSCCAG00000036441) #10 ENSCCAG00000026582 FNBP1 (ENSCCAG00000027876) #11 ENSCCAG00000023927 GPR107 (ENSCCAG00000023523) #12 NCS1 (ENSCCAG00000004740) #13 HMCN2 (ENSCCAG00000030148) ASS1 (ENSCCAG00000019714) #14 FUBP3 (ENSCCAG00000036313) #15 PRDM12 (ENSCCAG00000037485) #16 EXOSC2 (ENSCCAG00000019749) #17 ABL1 (ENSCCAG00000024305) #18 FIBCD1 (ENSCCAG00000021809) #20 LAMC3 (ENSCCAG00000032210) #21 AIF1L (ENSCCAG00000028559) #22 NUP214 (ENSCCAG00000029930) #23 FAM78A (ENSCCAG00000030026) #24 PLPP7 (ENSCCAG00000034918) #25 PRRC2B (ENSCCAG00000021389) #26 POMT1 (ENSCCAG00000021653) #27 UCK1 (ENSCCAG00000029994) #28 PRRT1B (ENSCCAG00000030500) #29 RAPGEF1 (ENSCCAG00000033960) #30 MED27 (ENSCCAG00000036779) #31 Bolivian squirrel monkey MODERN SPECIES 43 VPS13A (ENSSBOG00000020923) GNA14 (ENSSBOG00000027170) GNAQ (ENSSBOG00000021413) CEP78 (ENSSBOG00000025965) PSAT1 (ENSSBOG00000035275) ENSSBOG00000020286 ENSSBOG00000026941 HMCN2 (ENSSBOG00000033989) ENSSBOG00000021830 #14 FUBP3 (ENSSBOG00000021755) #15 ENSSBOG00000029129 EXOSC2 (ENSSBOG00000022712) #17 ABL1 (ENSSBOG00000029514) #18 FIBCD1 (ENSSBOG00000031329) #20 LAMC3 (ENSSBOG00000029307) #21 AIF1L (ENSSBOG00000026358) #22 ENSSBOG00000029007 NUP214 (ENSSBOG00000024522) #23 FAM78A (ENSSBOG00000017452) #24 PLPP7 (ENSSBOG00000026128) #25 PRRC2B (ENSSBOG00000024898) #26 POMT1 (ENSSBOG00000030442) #27 UCK1 (ENSSBOG00000028224) #28 PRRT1B (ENSSBOG00000026276) #29 RAPGEF1 (ENSSBOG00000034342) #30 MED27 (ENSSBOG00000024507) #31 Marmoset MODERN SPECIES ENSCJAG00000020318 #9 USP20 (ENSCJAG00000020348) #10 FNBP1 (ENSCJAG00000020360) #11 GPR107 (ENSCJAG00000020376) #12 ENSCJAG00000020388 HMCN2 (ENSCJAG00000020578) ENSCJAG00000020554 #14 FUBP3 (ENSCJAG00000020542) #15 PRDM12 (ENSCJAG00000081665) #16 EXOSC2 (ENSCJAG00000020537) #17 ENSCJAG00000087080 ABL1 (ENSCJAG00000020525) #18 QRFP (ENSCJAG00000023270) #19 FIBCD1 (ENSCJAG00000070440) #20 LAMC3 (ENSCJAG00000008567) #21 AIF1L (ENSCJAG00000082553) #22 NUP214 (ENSCJAG00000008476) #23 FAM78A (ENSCJAG00000056875) #24 PLPP7 (ENSCJAG00000008460) #25 ENSCJAG00000075695 PRRC2B (ENSCJAG00000008416) #26 POMT1 (ENSCJAG00000008387) #27 UCK1 (ENSCJAG00000008370) #28 PRRT1B (ENSCJAG00000042543) #29 RAPGEF1 (ENSCJAG00000008301) #30 MED27 (ENSCJAG00000018305) #31 ENSCJAG00000085067 NTNG2 (ENSCJAG00000018288) #32 SETX (ENSCJAG00000018245) #33 TTF1 (ENSCJAG00000018230) #34 CFAP77 (ENSCJAG00000018226) #35 Mas night monkey MODERN SPECIES 768 TOR1A (ENSANAG00000022800) #8 C9orf78 (ENSANAG00000037186) #9 USP20 (ENSANAG00000033852) #10 FNBP1 (ENSANAG00000034541) #11 GPR107 (ENSANAG00000028584) #12 ENSANAG00000019861 ENSANAG00000023513 HMCN2 (ENSANAG00000024488) ENSANAG00000029569 #14 FUBP3 (ENSANAG00000022905) #15 PRDM12 (ENSANAG00000020616) #16 EXOSC2 (ENSANAG00000036779) #17 ABL1 (ENSANAG00000029873) #18 FIBCD1 (ENSANAG00000031975) #20 LAMC3 (ENSANAG00000035600) #21 AIF1L (ENSANAG00000023994) #22 ENSANAG00000034120 NUP214 (ENSANAG00000035012) #23 FAM78A (ENSANAG00000029154) #24 PLPP7 (ENSANAG00000020976) #25 PRRC2B (ENSANAG00000025301) #26 POMT1 (ENSANAG00000021615) #27 UCK1 (ENSANAG00000033402) #28 PRRT1B (ENSANAG00000033367) #29 RAPGEF1 (ENSANAG00000030130) #30 MED27 (ENSANAG00000035284) #31 NTNG2 (ENSANAG00000027447) #32 SETX (ENSANAG00000028057) #33 ENSANAG00000037080 #34 CFAP77 (ENSANAG00000020872) #35 BARHL1 (ENSANAG00000023140) #36 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00910000147740 ENSGT00940000165095 ENSGT00390000004524.d #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT01010000230328 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 Hominoidea ANCESTRAL SPECIES 19 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00910000147740 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00910000148028 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207.j #31 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207.i.b #31 ENSGT00940000153601.a.a #32 Hominidae ANCESTRAL SPECIES 10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207.j #31 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207.i.b #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207.i.b #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Gorilla MODERN SPECIES 22 C9orf78 (ENSGGOG00000013358) #9 USP20 (ENSGGOG00000003539) #10 FNBP1 (ENSGGOG00000003548) #11 GPR107 (ENSGGOG00000001256) #12 ENSGGOG00000001210 HMCN2 (ENSGGOG00000010199) ASS1 (ENSGGOG00000010228) #14 ENSGGOG00000039090 FUBP3 (ENSGGOG00000011318) #15 PRDM12 (ENSGGOG00000010568) #16 EXOSC2 (ENSGGOG00000010578) #17 ABL1 (ENSGGOG00000010586) #18 QRFP (ENSGGOG00000010600) #19 FIBCD1 (ENSGGOG00000010605) #20 LAMC3 (ENSGGOG00000017164) #21 AIF1L (ENSGGOG00000017168) #22 NUP214 (ENSGGOG00000017169) #23 FAM78A (ENSGGOG00000017172) #24 PLPP7 (ENSGGOG00000017173) #25 PRRC2B (ENSGGOG00000012502) #26 ENSGGOG00000041833 POMT1 (ENSGGOG00000012525) #27 ENSGGOG00000036394 UCK1 (ENSGGOG00000012550) #28 PRRT1B (ENSGGOG00000026372) #29 RAPGEF1 (ENSGGOG00000008226) #30 ENSGGOG00000039160 ENSGGOG00000036257 MED27 (ENSGGOG00000010390) #31 NTNG2 (ENSGGOG00000016200) #32 SETX (ENSGGOG00000027664) #33 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT01010000230328 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207.i.b #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Pan ANCESTRAL SPECIES 18 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.g #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00910000148672 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207.i.b #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 Chimpanzee MODERN SPECIES 22 C9H9orf78 (ENSPTRG00000021465) #9 USP20 (ENSPTRG00000021466) #10 FNBP1 (ENSPTRG00000021468) #11 GPR107 (ENSPTRG00000021469) #12 ENSPTRG00000042947 NCS1 (ENSPTRG00000047046) HMCN2 (ENSPTRG00000021471) ASS1 (ENSPTRG00000021473) #14 FUBP3 (ENSPTRG00000021474) #15 PRDM12 (ENSPTRG00000021475) #16 EXOSC2 (ENSPTRG00000021476) #17 ABL1 (ENSPTRG00000021477) #18 QRFP (ENSPTRG00000021478) #19 ENSPTRG00000021479 #20 LAMC3 (ENSPTRG00000021480) #21 AIF1L (ENSPTRG00000021481) #22 NUP214 (ENSPTRG00000021482) #23 FAM78A (ENSPTRG00000021484) #24 PLPP7 (ENSPTRG00000021485) #25 PRRC2B (ENSPTRG00000021487) #26 ENSPTRG00000048981 POMT1 (ENSPTRG00000021488) #27 UCK1 (ENSPTRG00000021489) #28 PRRT1B (ENSPTRG00000051275) #29 RAPGEF1 (ENSPTRG00000021490) #30 ENSPTRG00000043931 ENSPTRG00000047190 MED27 (ENSPTRG00000021492) #31 NTNG2 (ENSPTRG00000021493) #32 SETX (ENSPTRG00000021495) #33 TTF1 (ENSPTRG00000021496) #34 Bonobo MODERN SPECIES 22 C9orf78 (ENSPPAG00000032236) #9 USP20 (ENSPPAG00000043597) #10 FNBP1 (ENSPPAG00000014368) #11 GPR107 (ENSPPAG00000031540) #12 ENSPPAG00000023411 NCS1 (ENSPPAG00000034386) #13 HMCN2 (ENSPPAG00000030138) ASS1 (ENSPPAG00000035214) #14 FUBP3 (ENSPPAG00000011103) #15 ENSPPAG00000031506 #16 EXOSC2 (ENSPPAG00000034796) #17 ABL1 (ENSPPAG00000036322) #18 QRFP (ENSPPAG00000009604) #19 FIBCD1 (ENSPPAG00000040268) #20 LAMC3 (ENSPPAG00000034248) #21 AIF1L (ENSPPAG00000020728) #22 NUP214 (ENSPPAG00000034806) #23 FAM78A (ENSPPAG00000031835) #24 PLPP7 (ENSPPAG00000040214) #25 PRRC2B (ENSPPAG00000035196) #26 ENSPPAG00000038076 POMT1 (ENSPPAG00000027406) #27 UCK1 (ENSPPAG00000042930) #28 ENSPPAG00000033521 #29 RAPGEF1 (ENSPPAG00000040344) #30 ENSPPAG00000043227 ENSPPAG00000034497 MED27 (ENSPPAG00000043027) #31 NTNG2 (ENSPPAG00000036118) #32 SETX (ENSPPAG00000004108) #33 TTF1 (ENSPPAG00000029768) #34 Human MODERN SPECIES 21 C9orf78 (ENSG00000136819) #9 USP20 (ENSG00000136878) #10 FNBP1 (ENSG00000187239) #11 GPR107 (ENSG00000148358) #12 NCS1 (ENSG00000107130) #13 HMCN2 (ENSG00000148357) ASS1 (ENSG00000130707) #14 FUBP3 (ENSG00000107164) #15 PRDM12 (ENSG00000130711) #16 EXOSC2 (ENSG00000130713) #17 ABL1 (ENSG00000097007) #18 ENSG00000288570 QRFP (ENSG00000188710) #19 FIBCD1 (ENSG00000130720) #20 LAMC3 (ENSG00000050555) #21 AIF1L (ENSG00000126878) #22 NUP214 (ENSG00000126883) #23 FAM78A (ENSG00000126882) #24 PLPP7 (ENSG00000160539) #25 PRRC2B (ENSG00000288701) #26 ENSG00000291303 ENSG00000288841 POMT1 (ENSG00000130714) #27 UCK1 (ENSG00000130717) #28 PRRT1B (ENSG00000283526) #29 RAPGEF1 (ENSG00000107263) #30 MED27 (ENSG00000160563) #31 NTNG2 (ENSG00000196358) #32 SETX (ENSG00000107290) #33 TTF1 (ENSG00000125482) #34 CFAP77 (ENSG00000188523) #35 Orangutan MODERN SPECIES 22 C9H9orf78 (ENSPPYG00000019685) #9 USP20 (ENSPPYG00000019686) #10 FNBP1 (ENSPPYG00000019687) #11 GPR107 (ENSPPYG00000019688) #12 NCS1 (ENSPPYG00000030119) #13 HMCN2 (ENSPPYG00000036670) ASS1 (ENSPPYG00000019692) #14 FUBP3 (ENSPPYG00000019693) #15 PRDM12 (ENSPPYG00000019694) #16 EXOSC2 (ENSPPYG00000019695) #17 ENSPPYG00000031031 ABL1 (ENSPPYG00000041735) #18 ENSPPYG00000041307 #19 FIBCD1 (ENSPPYG00000019871) #20 LAMC3 (ENSPPYG00000019697) #21 AIF1L (ENSPPYG00000019698) #22 NUP214 (ENSPPYG00000019699) #23 FAM78A (ENSPPYG00000019700) #24 PLPP7 (ENSPPYG00000019701) #25 PRRC2B (ENSPPYG00000019702) #26 POMT1 (ENSPPYG00000019703) #27 UCK1 (ENSPPYG00000019704) #28 PRRT1B (ENSPPYG00000041277) #29 RAPGEF1 (ENSPPYG00000019705) #30 MED27 (ENSPPYG00000019706) #31 NTNG2 (ENSPPYG00000019707) #32 SETX (ENSPPYG00000019708) #33 TTF1 (ENSPPYG00000019709) #34 CFAP77 (ENSPPYG00000019710) #35 BARHL1 (ENSPPYG00000039031) #36 DDX31 (ENSPPYG00000019713) Gibbon MODERN SPECIES 23 C9orf78 (ENSNLEG00000017658) #9 USP20 (ENSNLEG00000017660) #10 FNBP1 (ENSNLEG00000017666) #11 GPR107 (ENSNLEG00000017669) #12 ENSNLEG00000017681 ENSNLEG00000017684 HMCN2 (ENSNLEG00000031471) ENSNLEG00000012500 #14 ENSNLEG00000027365 FUBP3 (ENSNLEG00000012523) #15 ENSNLEG00000012531 EXOSC2 (ENSNLEG00000012533) #17 ABL1 (ENSNLEG00000012556) #18 FIBCD1 (ENSNLEG00000012569) #20 LAMC3 (ENSNLEG00000012583) #21 ENSNLEG00000012595 #22 ENSNLEG00000033847 NUP214 (ENSNLEG00000012614) #23 ENSNLEG00000012715 #24 PLPP7 (ENSNLEG00000028247) #25 PRRC2B (ENSNLEG00000012721) #26 POMT1 (ENSNLEG00000012757) #27 UCK1 (ENSNLEG00000012812) #28 PRRT1B (ENSNLEG00000012825) #29 RAPGEF1 (ENSNLEG00000012826) #30 ENSNLEG00000029445 MED27 (ENSNLEG00000012828) #31 NTNG2 (ENSNLEG00000012836) #32 SETX (ENSNLEG00000012839) #33 TTF1 (ENSNLEG00000012847) #34 CFAP77 (ENSNLEG00000012857) #35 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000154645.B #13 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00910000147740 ENSGT00940000165095 ENSGT00390000004524.d #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Rhinopithecus ANCESTRAL SPECIES 2 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.e #14 ENSGT00940000156744.e #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Golden snub-nosed monkey MODERN SPECIES 923 TOR1B (ENSRROG00000028784) #7 TOR1A (ENSRROG00000040520) #8 C9orf78 (ENSRROG00000041927) #9 USP20 (ENSRROG00000036984) #10 FNBP1 (ENSRROG00000005509) #11 GPR107 (ENSRROG00000043544) #12 NCS1 (ENSRROG00000006485) #13 HMCN2 (ENSRROG00000031883) ENSRROG00000018913 #14 ENSRROG00000030006 #15 PRDM12 (ENSRROG00000043554) #16 ENSRROG00000010827 #17 ABL1 (ENSRROG00000032347) #18 FIBCD1 (ENSRROG00000042577) #20 LAMC3 (ENSRROG00000044719) #21 AIF1L (ENSRROG00000042815) #22 NUP214 (ENSRROG00000034753) #23 FAM78A (ENSRROG00000041336) #24 PLPP7 (ENSRROG00000039458) #25 Black snub-nosed monkey MODERN SPECIES 1482 ENSRBIG00000042110 #15 PRDM12 (ENSRBIG00000042712) #16 ENSRBIG00000031203 #17 ABL1 (ENSRBIG00000027673) #18 FIBCD1 (ENSRBIG00000032843) #20 LAMC3 (ENSRBIG00000030316) #21 AIF1L (ENSRBIG00000042532) #22 NUP214 (ENSRBIG00000038320) #23 FAM78A (ENSRBIG00000044775) #24 PLPP7 (ENSRBIG00000027211) #25 PRRC2B (ENSRBIG00000037068) #26 POMT1 (ENSRBIG00000041158) #27 UCK1 (ENSRBIG00000029355) #28 PRRT1B (ENSRBIG00000035844) #29 ENSRBIG00000040714 RAPGEF1 (ENSRBIG00000035534) #30 MED27 (ENSRBIG00000042484) #31 NTNG2 (ENSRBIG00000044877) #32 SETX (ENSRBIG00000040526) #33 TTF1 (ENSRBIG00000033654) #34 CFAP77 (ENSRBIG00000038278) #35 CASTOR2 (ENSRBIG00000044309) Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000154645.B #13 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b #14 ENSGT00910000147740 ENSGT00940000165095 ENSGT00390000004524.d #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Vervet Monkey MODERN SPECIES 3 C9orf78 (ENSCSAG00000014663) #9 USP20 (ENSCSAG00000014672) #10 FNBP1 (ENSCSAG00000014702) #11 GPR107 (ENSCSAG00000014709) #12 ENSCSAG00000014716 ENSCSAG00000014723 ENSCSAG00000014730 ENSCSAG00000014739 #14 FUBP3 (ENSCSAG00000014748) #15 PRDM12 (ENSCSAG00000014756) #16 ENSCSAG00000014760 #17 ABL1 (ENSCSAG00000014767) #18 QRFP (ENSCSAG00000019708) #19 FIBCD1 (ENSCSAG00000014786) #20 ENSCSAG00000014800 #21 AIF1L (ENSCSAG00000014809) #22 NUP214 (ENSCSAG00000014824) #23 FAM78A (ENSCSAG00000014833) #24 PLPP7 (ENSCSAG00000014839) #25 PRRC2B (ENSCSAG00000014854) #26 POMT1 (ENSCSAG00000014870) #27 UCK1 (ENSCSAG00000014877) #28 RAPGEF1 (ENSCSAG00000014892) #30 MED27 (ENSCSAG00000014901) #31 NTNG2 (ENSCSAG00000014906) #32 SETX (ENSCSAG00000014918) #33 TTF1 (ENSCSAG00000014926) #34 CFAP77 (ENSCSAG00000014940) #35 BARHL1 (ENSCSAG00000014946) #36 DDX31 (ENSCSAG00000014953) GTF3C4 (ENSCSAG00000014958) #37 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.d.b #14 ENSGT00910000147740 ENSGT00910000148843 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.d.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147295 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Olive baboon MODERN SPECIES 4 USP20 (ENSPANG00000025975) #10 FNBP1 (ENSPANG00000025974) #11 GPR107 (ENSPANG00000025973) #12 ENSPANG00000033050 HMCN2 (ENSPANG00000025970) ENSPANG00000025969 #14 FUBP3 (ENSPANG00000025968) #15 PRDM12 (ENSPANG00000025967) #16 ENSPANG00000025966 #17 ENSPANG00000050722 ABL1 (ENSPANG00000025965) #18 ENSPANG00000044231 QRFP (ENSPANG00000048091) #19 FIBCD1 (ENSPANG00000048721) #20 LAMC3 (ENSPANG00000025978) #21 AIF1L (ENSPANG00000025979) #22 NUP214 (ENSPANG00000025984) #23 FAM78A (ENSPANG00000025983) #24 PLPP7 (ENSPANG00000025982) #25 PRRC2B (ENSPANG00000025981) #26 POMT1 (ENSPANG00000025980) #27 UCK1 (ENSPANG00000025985) #28 PRRT1B (ENSPANG00000025986) #29 RAPGEF1 (ENSPANG00000025994) #30 MED27 (ENSPANG00000025993) #31 NTNG2 (ENSPANG00000025992) #32 SETX (ENSPANG00000025990) #33 TTF1 (ENSPANG00000035653) #34 CFAP77 (ENSPANG00000025989) #35 BARHL1 (ENSPANG00000025988) #36 DDX31 (ENSPANG00000025987) Cercopithecinae_d ANCESTRAL SPECIES 56 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00910000146910 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.d.b #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 Sooty mangabey MODERN SPECIES 489 TOR1A (ENSCATG00000045229) #8 C9orf78 (ENSCATG00000045151) #9 USP20 (ENSCATG00000004362) #10 FNBP1 (ENSCATG00000043882) #11 GPR107 (ENSCATG00000034370) #12 ENSCATG00000032284 NCS1 (ENSCATG00000033117) #13 HMCN2 (ENSCATG00000035048) ENSCATG00000013316 #14 FUBP3 (ENSCATG00000015864) #15 PRDM12 (ENSCATG00000020327) #16 ENSCATG00000025389 #17 ABL1 (ENSCATG00000032564) #18 FIBCD1 (ENSCATG00000030096) #20 LAMC3 (ENSCATG00000033155) #21 AIF1L (ENSCATG00000035596) #22 NUP214 (ENSCATG00000032085) #23 FAM78A (ENSCATG00000030308) #24 PLPP7 (ENSCATG00000039081) #25 Drill MODERN SPECIES 1729 TOR1A (ENSMLEG00000043366) #8 C9orf78 (ENSMLEG00000031172) #9 USP20 (ENSMLEG00000041454) #10 FNBP1 (ENSMLEG00000035886) #11 GPR107 (ENSMLEG00000042178) #12 ENSMLEG00000039046 ENSMLEG00000038111 HMCN2 (ENSMLEG00000039936) ENSMLEG00000039436 #14 FUBP3 (ENSMLEG00000037030) #15 ENSMLEG00000036399 ENSMLEG00000042587 #17 ABL1 (ENSMLEG00000021955) #18 FIBCD1 (ENSMLEG00000043288) #20 LAMC3 (ENSMLEG00000035131) #21 AIF1L (ENSMLEG00000042949) #22 NUP214 (ENSMLEG00000038158) #23 FAM78A (ENSMLEG00000034280) #24 PLPP7 (ENSMLEG00000043423) #25 Macaca ANCESTRAL SPECIES 10 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.d.b #14 ENSGT00910000147740 ENSGT00910000148843 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00910000147033 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 Pig-tailed macaque MODERN SPECIES 317 TOR1A (ENSMNEG00000040996) #8 C9orf78 (ENSMNEG00000036833) #9 USP20 (ENSMNEG00000031133) #10 FNBP1 (ENSMNEG00000038706) #11 GPR107 (ENSMNEG00000029615) #12 ENSMNEG00000034406 HMCN2 (ENSMNEG00000019710) ASS1 (ENSMNEG00000044006) #14 ENSMNEG00000020943 FUBP3 (ENSMNEG00000039622) #15 PRDM12 (ENSMNEG00000037234) #16 ENSMNEG00000031861 #17 ABL1 (ENSMNEG00000028224) #18 FIBCD1 (ENSMNEG00000041044) #20 LAMC3 (ENSMNEG00000030621) #21 AIF1L (ENSMNEG00000030005) #22 NUP214 (ENSMNEG00000044802) #23 FAM78A (ENSMNEG00000033509) #24 PLPP7 (ENSMNEG00000030651) #25 PRRC2B (ENSMNEG00000028780) #26 POMT1 (ENSMNEG00000041652) #27 UCK1 (ENSMNEG00000036653) #28 PRRT1B (ENSMNEG00000042784) #29 RAPGEF1 (ENSMNEG00000029854) #30 ENSMNEG00000041728 MED27 (ENSMNEG00000033749) #31 NTNG2 (ENSMNEG00000033050) #32 SETX (ENSMNEG00000030657) #33 TTF1 (ENSMNEG00000028059) #34 CFAP77 (ENSMNEG00000039824) #35 DDX31 (ENSMNEG00000045539) Macaca_a ANCESTRAL SPECIES 10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524.c.a.a.a.b.d.b #14 ENSGT00910000147740 ENSGT00910000148843 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B.h #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT01100000263539.b.a.a.a.b.b.b.a.b.a.a.b ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT01100000263493.a.b.a.a.b.b.b.b.a.a.b.a ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.a.b ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 Rhesus MODERN SPECIES 6 GPR107 (ENSMMUG00000004200) #12 ENSMMUG00000049177 ENSMMUG00000061477 HMCN2 (ENSMMUG00000047733) ENSMMUG00000001522 #14 ENSMMUG00000053919 ENSMMUG00000063163 FUBP3 (ENSMMUG00000008249) #15 PRDM12 (ENSMMUG00000059085) #16 EXOSC2 (ENSMMUG00000012498) #17 ABL1 (ENSMMUG00000012499) #18 QRFP (ENSMMUG00000064112) #19 FIBCD1 (ENSMMUG00000012713) #20 ENSMMUG00000061789 LAMC3 (ENSMMUG00000002267) #21 AIF1L (ENSMMUG00000042881) #22 FAM78A (ENSMMUG00000021278) #24 PLPP7 (ENSMMUG00000047768) #25 ENSMMUG00000063727 NUP214 (ENSMMUG00000021724) #23 PRRC2B (ENSMMUG00000009973) #26 POMT1 (ENSMMUG00000009975) #27 UCK1 (ENSMMUG00000009976) #28 PRRT1B (ENSMMUG00000058925) #29 RAPGEF1 (ENSMMUG00000006479) #30 MED27 (ENSMMUG00000001727) #31 ENSMMUG00000058353 NTNG2 (ENSMMUG00000006923) #32 SETX (ENSMMUG00000018468) #33 TTF1 (ENSMMUG00000006833) #34 CFAP77 (ENSMMUG00000004588) #35 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000036140 ASS1 (ENSMFAG00000003315) #14 ENSMFAG00000058109 ENSMFAG00000061702 ENSMFAG00000047356 FUBP3 (ENSMFAG00000038309) #15 PRDM12 (ENSMFAG00000040322) #16 ENSMFAG00000000597 #17 ENSMFAG00000056552 ABL1 (ENSMFAG00000000271) #18 QRFP (ENSMFAG00000056880) #19 FIBCD1 (ENSMFAG00000003220) #20 ENSMFAG00000058941 LAMC3 (ENSMFAG00000042402) #21 ENSMFAG00000062689 AIF1L (ENSMFAG00000000641) #22 NUP214 (ENSMFAG00000042823) #23 FAM78A (ENSMFAG00000038474) #24 PLPP7 (ENSMFAG00000042509) #25 ENSMFAG00000057079 PRRC2B (ENSMFAG00000002662) #26 POMT1 (ENSMFAG00000038316) #27 UCK1 (ENSMFAG00000005947) #28 PRRT1B (ENSMFAG00000058024) #29 RAPGEF1 (ENSMFAG00000038154) #30 MED27 (ENSMFAG00000003320) #31 ENSMFAG00000047252 NTNG2 (ENSMFAG00000045866) #32 ENSMFAG00000052185 ENSMFAG00000055541 SETX (ENSMFAG00000039742) #33 Atlantogenata ANCESTRAL SPECIES 47 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Xenarthra ANCESTRAL SPECIES 356 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 Armadillo MODERN SPECIES 2511 AIF1L (ENSDNOG00000031374) #22 NUP214 (ENSDNOG00000016954) #23 FAM78A (ENSDNOG00000036183) #24 PLPP7 (ENSDNOG00000033977) #25 ENSDNOG00000003303 #26 ENSDNOG00000049744 #27 UCK1 (ENSDNOG00000044026) #28 ENSDNOG00000046344 #29 RAPGEF1 (ENSDNOG00000005701) #30 ENSDNOG00000036185 MED27 (ENSDNOG00000018182) #31 NTNG2 (ENSDNOG00000013686) #32 SETX (ENSDNOG00000016840) #33 Afrotheria ANCESTRAL SPECIES ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Afrotheria_a ANCESTRAL SPECIES ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00940000165095 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Hyrax MODERN SPECIES 2911 LAMC3 (ENSPCAG00000009259) #21 AIF1L (ENSPCAG00000009387) #22 ENSPCAG00000009433 Elephant MODERN SPECIES 472 USP20 (ENSLAFG00000009765) #10 FNBP1 (ENSLAFG00000009771) #11 GPR107 (ENSLAFG00000002123) #12 NCS1 (ENSLAFG00000004356) #13 ENSLAFG00000029599 ENSLAFG00000028874 ENSLAFG00000003243 ASS1 (ENSLAFG00000001037) #14 FUBP3 (ENSLAFG00000011611) #15 PRDM12 (ENSLAFG00000006979) #16 EXOSC2 (ENSLAFG00000006984) #17 ABL1 (ENSLAFG00000006986) #18 QRFP (ENSLAFG00000006993) #19 FIBCD1 (ENSLAFG00000001852) #20 LAMC3 (ENSLAFG00000011583) #21 AIF1L (ENSLAFG00000000804) #22 NUP214 (ENSLAFG00000000807) #23 FAM78A (ENSLAFG00000016099) #24 PRRC2B (ENSLAFG00000020536) #26 POMT1 (ENSLAFG00000021539) #27 UCK1 (ENSLAFG00000021633) #28 ENSLAFG00000027336 #29 RAPGEF1 (ENSLAFG00000003693) #30 MED27 (ENSLAFG00000011556) #31 NTNG2 (ENSLAFG00000032466) #32 ENSLAFG00000017327 #33 TTF1 (ENSLAFG00000001119) #34 CFAP77 (ENSLAFG00000015373) #35 BARHL1 (ENSLAFG00000015377) #36 DDX31 (ENSLAFG00000015379) GTF3C4 (ENSLAFG00000015395) #37 Marsupialia DUPLICATION Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES 18 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787.a #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.m.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Opossum MODERN SPECIES USP20 (ENSMODG00000006916) #10 FNBP1 (ENSMODG00000006998) #11 GPR107 (ENSMODG00000007041) #12 ENSMODG00000049281 NCS1 (ENSMODG00000007066) #13 HMCN2 (ENSMODG00000011793) ASS1 (ENSMODG00000012093) #14 FUBP3 (ENSMODG00000012105) #15 PRDM12 (ENSMODG00000012108) #16 EXOSC2 (ENSMODG00000012114) #17 ABL1 (ENSMODG00000012126) #18 ENSMODG00000012116 QRFP (ENSMODG00000012132) #19 FIBCD1 (ENSMODG00000012138) #20 LAMC3 (ENSMODG00000012155) #21 AIF1L (ENSMODG00000046888) #22 NUP214 (ENSMODG00000012396) #23 FAM78A (ENSMODG00000012402) #24 PLPP7 (ENSMODG00000012404) #25 PRRC2B (ENSMODG00000012428) #26 POMT1 (ENSMODG00000012449) #27 UCK1 (ENSMODG00000012460) #28 ENSMODG00000049539 #29 RAPGEF1 (ENSMODG00000012492) #30 MED27 (ENSMODG00000012499) #31 NTNG2 (ENSMODG00000012511) #32 SETX (ENSMODG00000012535) #33 ENSMODG00000012538 #34 CFAP77 (ENSMODG00000028455) #35 BARHL1 (ENSMODG00000012544) #36 DDX31 (ENSMODG00000012555) Marsupialia_b ANCESTRAL SPECIES ENSGT00390000013846.a.a.m.a #22 Tasmanian devil MODERN SPECIES 1 TOR1B (ENSSHAG00000027080) #7 ENSSHAG00000012313 #8 USP20 (ENSSHAG00000012417) #10 FNBP1 (ENSSHAG00000032090) #11 GPR107 (ENSSHAG00000013610) #12 ENSSHAG00000029345 HMCN2 (ENSSHAG00000014551) ASS1 (ENSSHAG00000015158) #14 FUBP3 (ENSSHAG00000015689) #15 PRDM12 (ENSSHAG00000028206) #16 EXOSC2 (ENSSHAG00000016050) #17 ABL1 (ENSSHAG00000016375) #18 ENSSHAG00000023233 #19 FIBCD1 (ENSSHAG00000016548) #20 LAMC3 (ENSSHAG00000016927) #21 ENSSHAG00000032126 #22 NUP214 (ENSSHAG00000017178) #23 FAM78A (ENSSHAG00000024695) #24 PLPP7 (ENSSHAG00000017412) #25 POMT1 (ENSSHAG00000024319) #27 PRRC2B (ENSSHAG00000017574) #26 UCK1 (ENSSHAG00000026604) #28 ENSSHAG00000027332 #29 RAPGEF1 (ENSSHAG00000017744) #30 MED27 (ENSSHAG00000021149) #31 NTNG2 (ENSSHAG00000018529) #32 SETX (ENSSHAG00000018610) #33 ENSSHAG00000023663 #34 CFAP77 (ENSSHAG00000018717) #35 BARHL1 (ENSSHAG00000025768) #36 DDX31 (ENSSHAG00000018804) Marsupialia ANCESTRAL SPECIES ENSGT00390000013846.a.a.m.b #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000013846.a.a.m.b #22 Tasmanian devil MODERN SPECIES 5 FGF2 (ENSSHAG00000030193) BBS12 (ENSSHAG00000011117) ENSSHAG00000020593 ENSSHAG00000031828 ENSSHAG00000002065 ENSSHAG00000002892 BLTP1 (ENSSHAG00000004565) TRPC3 (ENSSHAG00000008974) BBS7 (ENSSHAG00000009710) EXOSC9 (ENSSHAG00000002000) CCNA2 (ENSSHAG00000001634) SMIM43 (ENSSHAG00000023755) ANXA5 (ENSSHAG00000005161) ENSSHAG00000028698 NDNF (ENSSHAG00000008125) ENSSHAG00000003919 #22 PRDM5 (ENSSHAG00000003250) MAD2L1 (ENSSHAG00000008494) PDE5A (ENSSHAG00000009344) FABP2 (ENSSHAG00000010832) USP53 (ENSSHAG00000011019) MYOZ2 (ENSSHAG00000011793) SYNPO2 (ENSSHAG00000012401) ENSSHAG00000022135 SEC24D (ENSSHAG00000014053) METTL14 (ENSSHAG00000014237) ENSSHAG00000022088 ENSSHAG00000029943 ENSSHAG00000015329 ENSSHAG00000016586 WRN (ENSSHAG00000005577) Opossum MODERN SPECIES 7 COPG2 (ENSMODG00000014499) MEST (ENSMODG00000014516) CEP41 (ENSMODG00000014526) CPA1 (ENSMODG00000014538) CPA5 (ENSMODG00000014548) CPA4 (ENSMODG00000014554) SSMEM1 (ENSMODG00000014561) TMEM209 (ENSMODG00000014603) KLHDC10 (ENSMODG00000014616) ZC3HC1 (ENSMODG00000014630) UBE2H (ENSMODG00000014636) NRF1 (ENSMODG00000014645) ENSMODG00000024477 SMKR1 (ENSMODG00000041471) STRIP2 (ENSMODG00000014664) ENSMODG00000024483 #22 ENSMODG00000014672 SMO (ENSMODG00000014680) TSPAN33 (ENSMODG00000014684) ENSMODG00000038571 TNPO3 (ENSMODG00000014700) ENSMODG00000049892 ENSMODG00000031839 ATP6V1FNB (ENSMODG00000029411) ATP6V1F (ENSMODG00000049684) FLNC (ENSMODG00000015048) ENSMODG00000015065 OPN1SW (ENSMODG00000015071) CALU (ENSMODG00000015080) ENSMODG00000015091 ENSMODG00000029529 Marsupialia ANCESTRAL SPECIES ENSGT00390000013846.a.a.n #22 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00390000009787.a #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744.a #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.n #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787.a #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744.b #15 ENSGT00940000156744.a #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.n #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787.a #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744.b #15 ENSGT00940000156744.a #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a.n #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476 #35 ENSGT00940000160428 #36 ENSGT00550000075041 Common wonbat MODERN SPECIES 1030 TOR1B (ENSVURG00010012974) #7 TOR1A (ENSVURG00010012967) #8 ENSVURG00010012950 #9 USP20 (ENSVURG00010012929) #10 FNBP1 (ENSVURG00010012874) #11 GPR107 (ENSVURG00010012853) #12 NCS1 (ENSVURG00010012846) #13 ASS1 (ENSVURG00010012769) #14 ENSVURG00010012765 #15 PRDM12 (ENSVURG00010012758) #16 EXOSC2 (ENSVURG00010012748) #17 ABL1 (ENSVURG00010012727) #18 ENSVURG00010012717 #19 FIBCD1 (ENSVURG00010012708) #20 LAMC3 (ENSVURG00010012700) #21 AIF1L (ENSVURG00010012688) #22 NUP214 (ENSVURG00010012657) #23 FAM78A (ENSVURG00010012649) #24 ENSVURG00010012643 #25 ENSVURG00010012635 #25 PRRC2B (ENSVURG00010012602) #26 POMT1 (ENSVURG00010012559) #27 UCK1 (ENSVURG00010012538) #28 ENSVURG00010012532 #29 RAPGEF1 (ENSVURG00010012445) #30 MED27 (ENSVURG00010012431) #31 NTNG2 (ENSVURG00010012426) #32 SETX (ENSVURG00010012398) #33 ENSVURG00010012387 #34 CFAP77 (ENSVURG00010012382) #35 BARHL1 (ENSVURG00010012374) #36 koala MODERN SPECIES 243 USP20 (ENSPCIG00000024082) #10 FNBP1 (ENSPCIG00000024088) #11 GPR107 (ENSPCIG00000024101) #12 ENSPCIG00000027574 ENSPCIG00000031544 ENSPCIG00000024104 ASS1 (ENSPCIG00000024108) #14 ENSPCIG00000024112 FUBP3 (ENSPCIG00000024114) #15 PRDM12 (ENSPCIG00000024119) #16 EXOSC2 (ENSPCIG00000024122) #17 ABL1 (ENSPCIG00000023056) #18 ENSPCIG00000023053 #19 FIBCD1 (ENSPCIG00000023049) #20 LAMC3 (ENSPCIG00000023042) #21 AIF1L (ENSPCIG00000023039) #22 NUP214 (ENSPCIG00000032067) #23 FAM78A (ENSPCIG00000019765) #24 PLPP7 (ENSPCIG00000019763) #25 PRRC2B (ENSPCIG00000019760) #26 POMT1 (ENSPCIG00000019756) #27 UCK1 (ENSPCIG00000019755) #28 ENSPCIG00000019754 #29 RAPGEF1 (ENSPCIG00000019752) #30 MED27 (ENSPCIG00000014541) #31 NTNG2 (ENSPCIG00000019749) #32 SETX (ENSPCIG00000019748) #33 ENSPCIG00000012149 #34 CFAP77 (ENSPCIG00000034580) #35 BARHL1 (ENSPCIG00000019744) #36 DDX31 (ENSPCIG00000019742) Wallaby MODERN SPECIES 3373 AIF1L (ENSMEUG00000013882) #22 Platypus MODERN SPECIES 15 TOR1B (ENSOANG00000002550) #7 TOR1A (ENSOANG00000037291) #8 C9orf78 (ENSOANG00000037333) #9 USP20 (ENSOANG00000002553) #10 FNBP1 (ENSOANG00000002554) #11 GPR107 (ENSOANG00000002555) #12 NCS1 (ENSOANG00000001037) #13 ENSOANG00000001040 ASS1 (ENSOANG00000001041) #14 FUBP3 (ENSOANG00000001042) #15 ENSOANG00000001043 EXOSC2 (ENSOANG00000001044) #17 ABL1 (ENSOANG00000001046) #18 FIBCD1 (ENSOANG00000001048) #20 LAMC3 (ENSOANG00000001050) #21 AIF1L (ENSOANG00000042748) #22 NUP214 (ENSOANG00000014776) #23 FAM78A (ENSOANG00000014779) #24 PLPP7 (ENSOANG00000031545) #25 PRRC2B (ENSOANG00000014780) #26 POMT1 (ENSOANG00000014781) #27 UCK1 (ENSOANG00000014782) #28 ENSOANG00000031008 #29 RAPGEF1 (ENSOANG00000014783) #30 MED27 (ENSOANG00000014784) #31 NTNG2 (ENSOANG00000049690) #32 SETX (ENSOANG00000050914) #33 ENSOANG00000003116 #34 BARHL1 (ENSOANG00000050331) #36 DDX31 (ENSOANG00000005047) GTF3C4 (ENSOANG00000005050) #37 Sauria ANCESTRAL SPECIES 33 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Lepidosauria ANCESTRAL SPECIES 21 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Episquamata ANCESTRAL SPECIES 15 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Toxicofera ANCESTRAL SPECIES 26 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Elapidae ANCESTRAL SPECIES 18 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829.k.b #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00990000212579 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729.c #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Indian cobra MODERN SPECIES 8 ASB6 (ENSNNAG00000017600) PRRX2 (ENSNNAG00000017604) PTGES (ENSNNAG00000017607) TOR1B (ENSNNAG00000017614) #7 TOR1A (ENSNNAG00000017616) #8 C9orf78 (ENSNNAG00000017621) #9 USP20 (ENSNNAG00000017645) #10 FNBP1 (ENSNNAG00000017668) #11 GPR107 (ENSNNAG00000017702) #12 ENSNNAG00000017719 FUBP3 (ENSNNAG00000017723) #15 ABL1 (ENSNNAG00000017760) #18 ENSNNAG00000017763 FIBCD1 (ENSNNAG00000017765) #20 LAMC3 (ENSNNAG00000017777) #21 AIF1L (ENSNNAG00000017808) #22 ENSNNAG00000017814 #26 POMT1 (ENSNNAG00000017820) #27 UCK1 (ENSNNAG00000017826) #28 PRRT1B (ENSNNAG00000017829) #29 ENSNNAG00000017831 #31 NTNG2 (ENSNNAG00000017832) #32 SETX (ENSNNAG00000017835) #33 ENSNNAG00000017840 #34 ENSNNAG00000017847 ENSNNAG00000017849 TSC1 (ENSNNAG00000003400) SPACA9 (ENSNNAG00000003551) GFI1B (ENSNNAG00000003570) GTF3C5 (ENSNNAG00000003589) ENSNNAG00000003615 Elapidae_a ANCESTRAL SPECIES 26 ENSGT00390000009787 #9 ENSGT00940000158829.k.a #10 ENSGT00950000183047.d.b #11 ENSGT00950000183047.d.a #11 ENSGT00940000158829.k.b #10 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00990000212579 ENSGT00940000155976.a #20 ENSGT00940000161559.c #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147.i #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT00940000165628 ENSGT00940000155946 ENSGT00940000154079.b ENSGT00940000159944 ENSGT00940000160616 ENSGT00940000157955 ENSGT00940000155945 ENSGT00940000154374.a ENSGT00390000000642.c Acanthophiinae ANCESTRAL SPECIES 27 ENSGT00940000158829.k.b #10 ENSGT00940000158829.k.a #10 ENSGT00950000183047.d.b #11 ENSGT00950000183047.d.a #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00990000212579 ENSGT00940000155976.a #20 ENSGT00940000161559.c #21 ENSGT00390000013846.a.a #22 ENSGT00940000165005 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147.i #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT00940000155946 ENSGT00940000154079.b ENSGT00940000159944 ENSGT00940000160616 ENSGT00940000157955 ENSGT00940000155945 ENSGT00940000154374.a ENSGT00390000000642.c ENSGT00940000156611.c Eastern brown snake MODERN SPECIES 54 C9orf78 (ENSPTXG00000014257) #9 ENSPTXG00000014258 #10 ENSPTXG00000014260 #11 ENSPTXG00000014262 #11 GPR107 (ENSPTXG00000014263) #12 ENSPTXG00000014265 ASS1 (ENSPTXG00000014266) #14 FUBP3 (ENSPTXG00000014267) #15 PRDM12 (ENSPTXG00000014268) #16 EXOSC2 (ENSPTXG00000014269) #17 ABL1 (ENSPTXG00000014270) #18 ENSPTXG00000014271 FIBCD1 (ENSPTXG00000014272) #20 ENSPTXG00000014273 #21 ENSPTXG00000014274 #21 AIF1L (ENSPTXG00000014278) #22 ENSPTXG00000014281 ENSPTXG00000014292 #23 FAM78A (ENSPTXG00000014294) #24 PLPP7 (ENSPTXG00000014296) #25 ENSPTXG00000014299 #26 ENSPTXG00000014302 #26 POMT1 (ENSPTXG00000014311) #27 RALGPS1 (ENSPTXG00000014318) ANGPTL2 (ENSPTXG00000014319) ZBTB34 (ENSPTXG00000014320) ZBTB43 (ENSPTXG00000014321) LMX1B (ENSPTXG00000014323) MVB12B (ENSPTXG00000014326) PBX3 (ENSPTXG00000014328) MAPKAP1 (ENSPTXG00000014330) Mainland tiger snake MODERN SPECIES 262 ENSNSUG00000000036 FIBCD1 (ENSNSUG00000000033) #20 ENSNSUG00000000012 #21 ENSNSUG00000019237 #21 AIF1L (ENSNSUG00000019236) #22 ENSNSUG00000019235 ENSNSUG00000019234 #23 FAM78A (ENSNSUG00000019232) #24 ENSNSUG00000019231 #25 ENSNSUG00000019229 #25 PRRC2B (ENSNSUG00000018956) #26 POMT1 (ENSNSUG00000018955) #27 ANGPTL2 (ENSNSUG00000018954) RALGPS1 (ENSNSUG00000018953) ZBTB34 (ENSNSUG00000018952) ZBTB43 (ENSNSUG00000018951) LMX1B (ENSNSUG00000018950) MVB12B (ENSNSUG00000018949) Blue-lipped sea krait MODERN SPECIES 2457 AIF1L (ENSLLTG00000000713) #22 ENSLLTG00000000621 Lizard MODERN SPECIES 52 ENSACAG00000001526 #22 Laterata ANCESTRAL SPECIES 20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Common wall lizard MODERN SPECIES 419 ENSPMRG00000022433 ENSPMRG00000022437 ENSPMRG00000022438 FKBP15 (ENSPMRG00000022442) SLC31A1 (ENSPMRG00000022447) ENSPMRG00000022452 CDC26 (ENSPMRG00000022453) PRPF4 (ENSPMRG00000022456) RNF183 (ENSPMRG00000022461) ENSPMRG00000022465 ENSPMRG00000022468 CACFD1 (ENSPMRG00000022472) ADAMTS13 (ENSPMRG00000022507) ENSPMRG00000022602 LAMC3 (ENSPMRG00000022606) #21 AIF1L (ENSPMRG00000022615) #22 ENSPMRG00000022635 FAM78A (ENSPMRG00000022659) #24 PLPP7 (ENSPMRG00000022662) #25 PRRC2B (ENSPMRG00000022671) #26 POMT1 (ENSPMRG00000022702) #27 UCK1 (ENSPMRG00000022767) #28 RAPGEF1 (ENSPMRG00000022822) #30 MED27 (ENSPMRG00000022959) #31 NTNG2 (ENSPMRG00000022966) #32 SURF1 (ENSPMRG00000022973) ENSPMRG00000022979 ENSPMRG00000022992 SURF6 (ENSPMRG00000022994) ENSPMRG00000023003 GBGT1 (ENSPMRG00000023014) Argentine black and white tegu MODERN SPECIES 52 LAMC3 (ENSSMRG00000007451) #21 AIF1L (ENSSMRG00000007472) #22 NUP214 (ENSSMRG00000007479) #23 FAM78A (ENSSMRG00000007521) #24 PLPP7 (ENSSMRG00000007523) #25 PRRC2B (ENSSMRG00000007526) #26 ENSSMRG00000007563 POMT1 (ENSSMRG00000007566) #27 UCK1 (ENSSMRG00000007569) #28 PRRT1B (ENSSMRG00000007570) #29 RAPGEF1 (ENSSMRG00000007571) #30 MED27 (ENSSMRG00000007604) #31 NTNG2 (ENSSMRG00000007605) #32 SETX (ENSSMRG00000007608) #33 ENSSMRG00000007632 #34 ENSSMRG00000007640 #35 BARHL1 (ENSSMRG00000007641) #36 tuatara MODERN SPECIES 746 ENSSPUG00000013627 #10 ENSSPUG00000013621 #10 ENSSPUG00000013609 #10 FNBP1 (ENSSPUG00000013574) #11 GPR107 (ENSSPUG00000013547) #12 ENSSPUG00000013532 ENSSPUG00000013499 ASS1 (ENSSPUG00000013476) #14 FUBP3 (ENSSPUG00000013444) #15 PRDM12 (ENSSPUG00000013424) #16 EXOSC2 (ENSSPUG00000013391) #17 ABL1 (ENSSPUG00000013377) #18 QRFP (ENSSPUG00000013374) #19 FIBCD1 (ENSSPUG00000013366) #20 LAMC3 (ENSSPUG00000013339) #21 AIF1L (ENSSPUG00000013329) #22 NUP214 (ENSSPUG00000013183) #23 FAM78A (ENSSPUG00000013126) #24 PLPP7 (ENSSPUG00000013116) #25 Archelosauria ANCESTRAL SPECIES 32 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Archosauria ANCESTRAL SPECIES 25 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Aves ANCESTRAL SPECIES 21 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Neognathae ANCESTRAL SPECIES 20 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT00960000189405 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Galloanserae ANCESTRAL SPECIES 22 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT01070000256962 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 Anatidae ANCESTRAL SPECIES 13 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00960000189405 ENSGT00390000004524.t #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT01070000256962 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00550000075041 Pink-footed goose MODERN SPECIES 8 C9orf78 (ENSABRG00000020779) #9 USP20 (ENSABRG00000020788) #10 FNBP1 (ENSABRG00000020798) #11 GPR107 (ENSABRG00000020811) #12 NCS1 (ENSABRG00000020814) #13 ENSABRG00000020834 ENSABRG00000020840 ASS1 (ENSABRG00000020847) #14 FUBP3 (ENSABRG00000020855) #15 PRDM12 (ENSABRG00000020900) #16 EXOSC2 (ENSABRG00000020908) #17 ABL1 (ENSABRG00000020922) #18 QRFP (ENSABRG00000020930) #19 FIBCD1 (ENSABRG00000020932) #20 LAMC3 (ENSABRG00000020944) #21 AIF1L (ENSABRG00000020969) #22 NUP214 (ENSABRG00000020986) #23 FAM78A (ENSABRG00000021016) #24 PLPP7 (ENSABRG00000021019) #25 PRRC2B (ENSABRG00000021033) #26 ENSABRG00000021060 POMT1 (ENSABRG00000021073) #27 UCK1 (ENSABRG00000021134) #28 RAPGEF1 (ENSABRG00000021162) #30 MED27 (ENSABRG00000021196) #31 NTNG2 (ENSABRG00000021198) #32 ENSABRG00000021202 SETX (ENSABRG00000021209) #33 ENSABRG00000021218 #34 CFAP77 (ENSABRG00000021236) #35 DDX31 (ENSABRG00000021246) Duck MODERN SPECIES 3922 AIF1L (ENSAPLG00000025152) #22 Phasianidae ANCESTRAL SPECIES 20 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147.h #25 ENSGT00940000157147.g #25 ENSGT00950000183161.a.b #26 ENSGT01070000256962 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 Japanese quail MODERN SPECIES 8 TOR1A (ENSCJPG00005020382) #8 C9orf78 (ENSCJPG00005020383) #9 USP20 (ENSCJPG00005020384) #10 FNBP1 (ENSCJPG00005020409) #11 GPR107 (ENSCJPG00005000055) #12 ENSCJPG00005000098 NCS1 (ENSCJPG00005000105) #13 ASS1 (ENSCJPG00005000115) #14 FUBP3 (ENSCJPG00005000185) #15 PRDM12 (ENSCJPG00005001974) #16 EXOSC2 (ENSCJPG00005001981) #17 ABL1 (ENSCJPG00005002012) #18 QRFP (ENSCJPG00005002248) #19 FIBCD1 (ENSCJPG00005002254) #20 LAMC3 (ENSCJPG00005002288) #21 AIF1L (ENSCJPG00005003463) #22 NUP214 (ENSCJPG00005003464) #23 FAM78A (ENSCJPG00005003746) #24 ENSCJPG00005003750 #25 ENSCJPG00005003752 #25 PRRC2B (ENSCJPG00005003775) #26 POMT1 (ENSCJPG00005005203) #27 UCK1 (ENSCJPG00005005442) #28 RAPGEF1 (ENSCJPG00005005477) #30 MED27 (ENSCJPG00005006101) #31 NTNG2 (ENSCJPG00005006108) #32 SETX (ENSCJPG00005006122) #33 ENSCJPG00005006396 #34 CFAP77 (ENSCJPG00005006401) #35 BARHL1 (ENSCJPG00005006405) #36 ENSCJPG00005006408 Phasianidae_b ANCESTRAL SPECIES 19 ENSGT00950000182888.a.a.a.j.a #7 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147.h #25 ENSGT00940000157147.g #25 ENSGT00950000183161.a.b #26 ENSGT01070000256962 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 Turkey MODERN SPECIES 10 TOR1B (ENSMGAG00000005072) #7 TOR1A (ENSMGAG00000005102) #8 C9orf78 (ENSMGAG00000005128) #9 USP20 (ENSMGAG00000005153) #10 FNBP1 (ENSMGAG00000005202) #11 GPR107 (ENSMGAG00000005222) #12 ENSMGAG00000005292 ASS1 (ENSMGAG00000005305) #14 ENSMGAG00000005414 FUBP3 (ENSMGAG00000005342) #15 PRDM12 (ENSMGAG00000005438) #16 EXOSC2 (ENSMGAG00000005450) #17 ABL1 (ENSMGAG00000005488) #18 FIBCD1 (ENSMGAG00000022842) #20 LAMC3 (ENSMGAG00000005541) #21 AIF1L (ENSMGAG00000022652) #22 NUP214 (ENSMGAG00000005609) #23 FAM78A (ENSMGAG00000005677) #24 PLPP7 (ENSMGAG00000005682) #25 PRRC2B (ENSMGAG00000005688) #26 POMT1 (ENSMGAG00000005747) #27 UCK1 (ENSMGAG00000005829) #28 RAPGEF1 (ENSMGAG00000005844) #30 MED27 (ENSMGAG00000005905) #31 NTNG2 (ENSMGAG00000005914) #32 SETX (ENSMGAG00000005934) #33 ENSMGAG00000005982 #34 CFAP77 (ENSMGAG00000005994) #35 BARHL1 (ENSMGAG00000019353) #36 DDX31 (ENSMGAG00000006002) GTF3C4 (ENSMGAG00000006042) #37 Chicken MODERN SPECIES 8 TOR1B (ENSGALG00010028491) #7 TOR1A (ENSGALG00010028493) #8 C17H9orf78 (ENSGALG00010028498) #9 USP20 (ENSGALG00010028501) #10 FNBP1 (ENSGALG00010028514) #11 GPR107 (ENSGALG00010028536) #12 NCS1 (ENSGALG00010028551) ASS1 (ENSGALG00010027383) #14 FUBP3 (ENSGALG00010028889) #15 PRDM12 (ENSGALG00010027588) #16 EXOSC2 (ENSGALG00010027597) #17 ABL1 (ENSGALG00010027607) #18 QRFP (ENSGALG00010028920) #19 FIBCD1 (ENSGALG00010027622) #20 LAMC3 (ENSGALG00010027632) #21 AIF1L (ENSGALG00010027654) #22 NUP214 (ENSGALG00010028137) #23 ENSGALG00010028143 FAM78A (ENSGALG00010028144) #24 ENSGALG00010028148 #25 ENSGALG00010029144 #25 PRRC2B (ENSGALG00010028157) #26 ENSGALG00010028167 POMT1 (ENSGALG00010028175) #27 UCK1 (ENSGALG00010028198) #28 PRRT1B (ENSGALG00010028205) #29 RAPGEF1 (ENSGALG00010028270) #30 MED27 (ENSGALG00010028438) #31 NTNG2 (ENSGALG00010028768) #32 SETX (ENSGALG00010028771) #33 TTF1 (ENSGALG00010028772) #34 Neognathae_b ANCESTRAL SPECIES 21 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Passeriformes ANCESTRAL SPECIES 20 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Great tit MODERN SPECIES 7 TOR1B (ENSPMJG00000006937) #7 TOR1A (ENSPMJG00000006936) #8 C9orf78 (ENSPMJG00000006935) #9 USP20 (ENSPMJG00000006933) #10 FNBP1 (ENSPMJG00000006925) #11 GPR107 (ENSPMJG00000006920) #12 ENSPMJG00000006913 ASS1 (ENSPMJG00000006879) #14 FUBP3 (ENSPMJG00000006848) #15 PRDM12 (ENSPMJG00000006843) #16 EXOSC2 (ENSPMJG00000006842) #17 ABL1 (ENSPMJG00000006837) #18 QRFP (ENSPMJG00000006836) #19 FIBCD1 (ENSPMJG00000006832) #20 LAMC3 (ENSPMJG00000006829) #21 AIF1L (ENSPMJG00000006827) #22 NUP214 (ENSPMJG00000006822) #23 FAM78A (ENSPMJG00000006821) #24 PLPP7 (ENSPMJG00000006820) #25 PRRC2B (ENSPMJG00000006813) #26 POMT1 (ENSPMJG00000006808) #27 UCK1 (ENSPMJG00000006806) #28 PRRT1B (ENSPMJG00000006804) #29 RAPGEF1 (ENSPMJG00000006780) #30 ENSPMJG00000006751 MED27 (ENSPMJG00000006745) #31 NTNG2 (ENSPMJG00000006737) #32 SETX (ENSPMJG00000006725) #33 TTF1 (ENSPMJG00000006722) #34 CFAP77 (ENSPMJG00000006721) #35 BARHL1 (ENSPMJG00000006706) #36 Passeriformes_d ANCESTRAL SPECIES 20 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Flycatcher MODERN SPECIES 7 USP20 (ENSFALG00000001438) #10 FNBP1 (ENSFALG00000001439) #11 GPR107 (ENSFALG00000001440) #12 ENSFALG00000026470 ENSFALG00000024610 ENSFALG00000023533 ENSFALG00000027470 ASS1 (ENSFALG00000001443) #14 ENSFALG00000025351 FUBP3 (ENSFALG00000001444) #15 PRDM12 (ENSFALG00000001445) #16 EXOSC2 (ENSFALG00000001446) #17 ABL1 (ENSFALG00000001447) #18 FIBCD1 (ENSFALG00000001448) #20 LAMC3 (ENSFALG00000001449) #21 AIF1L (ENSFALG00000027282) #22 NUP214 (ENSFALG00000001451) #23 FAM78A (ENSFALG00000023546) #24 PLPP7 (ENSFALG00000001453) #25 PRRC2B (ENSFALG00000001454) #26 POMT1 (ENSFALG00000001457) #27 UCK1 (ENSFALG00000028683) #28 ENSFALG00000023403 ENSFALG00000029093 PRRT1B (ENSFALG00000027167) #29 RAPGEF1 (ENSFALG00000001461) #30 MED27 (ENSFALG00000001462) #31 NTNG2 (ENSFALG00000001463) #32 SETX (ENSFALG00000001464) #33 TTF1 (ENSFALG00000001465) #34 ENSFALG00000001466 #35 Passeriformes_g ANCESTRAL SPECIES 21 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Passeroidea ANCESTRAL SPECIES 21 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Zebra finch MODERN SPECIES 8 TOR1B (ENSTGUG00000004451) #7 TOR1A (ENSTGUG00000004463) #8 USP20 (ENSTGUG00000004503) #10 C9orf78 (ENSTGUG00000004486) #9 FNBP1 (ENSTGUG00000004545) #11 GPR107 (ENSTGUG00000004567) #12 ENSTGUG00000022805 ASS1 (ENSTGUG00000004656) #14 FUBP3 (ENSTGUG00000004662) #15 PRDM12 (ENSTGUG00000004692) #16 EXOSC2 (ENSTGUG00000004697) #17 ABL1 (ENSTGUG00000004720) #18 QRFP (ENSTGUG00000025348) #19 FIBCD1 (ENSTGUG00000004769) #20 LAMC3 (ENSTGUG00000004775) #21 AIF1L (ENSTGUG00000004809) #22 NUP214 (ENSTGUG00000004822) #23 FAM78A (ENSTGUG00000028321) #24 PLPP7 (ENSTGUG00000004901) #25 PRRC2B (ENSTGUG00000004903) #26 POMT1 (ENSTGUG00000004939) #27 UCK1 (ENSTGUG00000022263) #28 RAPGEF1 (ENSTGUG00000005007) #30 MED27 (ENSTGUG00000005076) #31 NTNG2 (ENSTGUG00000005108) #32 SETX (ENSTGUG00000005117) #33 TTF1 (ENSTGUG00000005125) #34 ENSTGUG00000005102 #35 BARHL1 (ENSTGUG00000005134) #36 DDX31 (ENSTGUG00000005142) GTF3C4 (ENSTGUG00000005175) #37 Common canary MODERN SPECIES 22 C9orf78 (ENSSCAG00000004957) #9 USP20 (ENSSCAG00000004943) #10 FNBP1 (ENSSCAG00000004913) #11 GPR107 (ENSSCAG00000004896) #12 ENSSCAG00000004893 ASS1 (ENSSCAG00000004836) #14 ENSSCAG00000004830 FUBP3 (ENSSCAG00000004564) #15 PRDM12 (ENSSCAG00000004509) #16 EXOSC2 (ENSSCAG00000004502) #17 ABL1 (ENSSCAG00000004492) #18 QRFP (ENSSCAG00000004485) #19 FIBCD1 (ENSSCAG00000004481) #20 ENSSCAG00000004478 #21 ENSSCAG00000004472 AIF1L (ENSSCAG00000004468) #22 NUP214 (ENSSCAG00000004176) #23 FAM78A (ENSSCAG00000004118) #24 PLPP7 (ENSSCAG00000004112) #25 PRRC2B (ENSSCAG00000004089) #26 POMT1 (ENSSCAG00000004082) #27 UCK1 (ENSSCAG00000004078) #28 ENSSCAG00000004075 RAPGEF1 (ENSSCAG00000004064) #30 MED27 (ENSSCAG00000004058) #31 NTNG2 (ENSSCAG00000004051) #32 SETX (ENSSCAG00000004025) #33 TTF1 (ENSSCAG00000004015) #34 CFAP77 (ENSSCAG00000004005) #35 BARHL1 (ENSSCAG00000003997) #36 ENSSCAG00000003986 Medium ground finch MODERN SPECIES 32 C9orf78 (ENSGFOG00000010738) #9 USP20 (ENSGFOG00000010723) #10 FNBP1 (ENSGFOG00000010678) #11 GPR107 (ENSGFOG00000010651) #12 ENSGFOG00000010643 ENSGFOG00000010639 ENSGFOG00000010636 ASS1 (ENSGFOG00000010624) #14 FUBP3 (ENSGFOG00000010608) #15 PRDM12 (ENSGFOG00000010595) #16 EXOSC2 (ENSGFOG00000010587) #17 ABL1 (ENSGFOG00000010577) #18 ENSGFOG00000010568 FIBCD1 (ENSGFOG00000010563) #20 LAMC3 (ENSGFOG00000010543) #21 AIF1L (ENSGFOG00000010535) #22 NUP214 (ENSGFOG00000010517) #23 FAM78A (ENSGFOG00000010509) #24 PLPP7 (ENSGFOG00000010507) #25 PRRC2B (ENSGFOG00000010475) #26 POMT1 (ENSGFOG00000010438) #27 UCK1 (ENSGFOG00000010426) #28 RAPGEF1 (ENSGFOG00000010329) #30 MED27 (ENSGFOG00000010306) #31 NTNG2 (ENSGFOG00000010295) #32 SETX (ENSGFOG00000010285) #33 TTF1 (ENSGFOG00000010270) #34 CFAP77 (ENSGFOG00000010260) #35 DDX31 (ENSGFOG00000010248) GTF3C4 (ENSGFOG00000010238) #37 ENSGFOG00000010223 Neognathae_c ANCESTRAL SPECIES 25 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000154645.B #13 ENSGT00940000162328 ENSGT01030000238169 ENSGT00960000189405 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Kakapo MODERN SPECIES 9 USP20 (ENSSHBG00005011734) #10 FNBP1 (ENSSHBG00005011684) #11 GPR107 (ENSSHBG00005011641) #12 NCS1 (ENSSHBG00005011616) #13 ENSSHBG00005011600 ENSSHBG00005011579 ASS1 (ENSSHBG00005011556) #14 FUBP3 (ENSSHBG00005011526) #15 PRDM12 (ENSSHBG00005011503) #16 EXOSC2 (ENSSHBG00005000867) #17 ABL1 (ENSSHBG00005017161) #18 QRFP (ENSSHBG00005017155) #19 FIBCD1 (ENSSHBG00005017148) #20 ENSSHBG00005017142 #21 ENSSHBG00005017138 AIF1L (ENSSHBG00005017132) #22 NUP214 (ENSSHBG00005017113) #23 FAM78A (ENSSHBG00005017099) #24 PLPP7 (ENSSHBG00005017094) #25 PRRC2B (ENSSHBG00005017075) #26 POMT1 (ENSSHBG00005017043) #27 UCK1 (ENSSHBG00005017024) #28 PRRT1B (ENSSHBG00005017020) #29 RAPGEF1 (ENSSHBG00005014669) #30 MED27 (ENSSHBG00005014439) #31 NTNG2 (ENSSHBG00005014433) #32 SETX (ENSSHBG00005014399) #33 TTF1 (ENSSHBG00005014371) #34 CFAP77 (ENSSHBG00005014350) #35 BARHL1 (ENSSHBG00005014333) #36 DDX31 (ENSSHBG00005014274) Golden eagle MODERN SPECIES 16 FNBP1 (ENSACCG00020013087) #11 GPR107 (ENSACCG00020013158) #12 NCS1 (ENSACCG00020013184) #13 ENSACCG00020013275 ENSACCG00020013314 ENSACCG00020013322 ASS1 (ENSACCG00020013345) #14 FUBP3 (ENSACCG00020013398) #15 PRDM12 (ENSACCG00020013439) #16 EXOSC2 (ENSACCG00020013462) #17 ABL1 (ENSACCG00020013528) #18 QRFP (ENSACCG00020013555) #19 FIBCD1 (ENSACCG00020013575) #20 ENSACCG00020013604 #21 ENSACCG00020013632 AIF1L (ENSACCG00020013647) #22 NUP214 (ENSACCG00020013676) #23 FAM78A (ENSACCG00020013701) #24 PLPP7 (ENSACCG00020013730) #25 PRRC2B (ENSACCG00020013773) #26 POMT1 (ENSACCG00020013833) #27 UCK1 (ENSACCG00020013870) #28 PRRT1B (ENSACCG00020013892) #29 RAPGEF1 (ENSACCG00020013990) #30 MED27 (ENSACCG00020014108) #31 NTNG2 (ENSACCG00020014123) #32 SETX (ENSACCG00020014176) #33 TTF1 (ENSACCG00020014241) #34 CFAP77 (ENSACCG00020014262) #35 BARHL1 (ENSACCG00020014275) #36 DDX31 (ENSACCG00020014292) African ostrich MODERN SPECIES 293 FUBP3 (ENSSCUG00000000358) #15 EXOSC2 (ENSSCUG00000002681) #17 ABL1 (ENSSCUG00000002677) #18 AIF1L (ENSSCUG00000002673) #22 NUP214 (ENSSCUG00000002667) #23 FAM78A (ENSSCUG00000002662) #24 PLPP7 (ENSSCUG00000002660) #25 PRRC2B (ENSSCUG00000002639) #26 POMT1 (ENSSCUG00000002625) #27 UCK1 (ENSSCUG00000002622) #28 RAPGEF1 (ENSSCUG00000002611) #30 MED27 (ENSSCUG00000002608) #31 NTNG2 (ENSSCUG00000002607) #32 SETX (ENSSCUG00000002596) #33 TTF1 (ENSSCUG00000002580) #34 CFAP77 (ENSSCUG00000002576) #35 DDX31 (ENSSCUG00000002568) GTF3C4 (ENSSCUG00000002566) #37 ENSSCUG00000002564 Australian saltwater crocodile MODERN SPECIES 44 USP20 (ENSCPRG00005003875) #10 FNBP1 (ENSCPRG00005003896) #11 GPR107 (ENSCPRG00005003958) #12 ENSCPRG00005004059 ENSCPRG00005004065 ENSCPRG00005004076 ENSCPRG00005004077 #14 ENSCPRG00005004082 #14 FUBP3 (ENSCPRG00005004094) #15 PRDM12 (ENSCPRG00005004127) #16 EXOSC2 (ENSCPRG00005004128) #17 ABL1 (ENSCPRG00005004133) #18 QRFP (ENSCPRG00005004138) #19 FIBCD1 (ENSCPRG00005004143) #20 LAMC3 (ENSCPRG00005004150) #21 AIF1L (ENSCPRG00005004173) #22 NUP214 (ENSCPRG00005004239) #23 FAM78A (ENSCPRG00005004692) #24 PLPP7 (ENSCPRG00005004694) #25 PRRC2B (ENSCPRG00005004857) #26 POMT1 (ENSCPRG00005006119) #27 UCK1 (ENSCPRG00005006129) #28 RAPGEF1 (ENSCPRG00005006208) #30 MED27 (ENSCPRG00005006504) #31 NTNG2 (ENSCPRG00005006507) #32 SETX (ENSCPRG00005006521) #33 TTF1 (ENSCPRG00005006533) #34 ENSCPRG00005006540 ENSCPRG00005006545 #35 BARHL1 (ENSCPRG00005006561) #36 DDX31 (ENSCPRG00005006568) Cryptodira ANCESTRAL SPECIES 33 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00910000145259 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Testudinoidea ANCESTRAL SPECIES 23 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 Emydidae ANCESTRAL SPECIES 29 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000163383 #29 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 painted turtle MODERN SPECIES 716 TOR1B (ENSCPBG00000022731) #7 TOR1A (ENSCPBG00000022729) #8 C9orf78 (ENSCPBG00000022726) #9 USP20 (ENSCPBG00000022718) #10 FNBP1 (ENSCPBG00000022705) #11 ENSCPBG00000022697 ENSCPBG00000022683 ASS1 (ENSCPBG00000022650) #14 FUBP3 (ENSCPBG00000022635) #15 PRDM12 (ENSCPBG00000022628) #16 EXOSC2 (ENSCPBG00000022626) #17 ABL1 (ENSCPBG00000022624) #18 QRFP (ENSCPBG00000022622) #19 FIBCD1 (ENSCPBG00000022617) #20 LAMC3 (ENSCPBG00000022610) #21 AIF1L (ENSCPBG00000022607) #22 NUP214 (ENSCPBG00000022591) #23 FAM78A (ENSCPBG00000022584) #24 PLPP7 (ENSCPBG00000022582) #25 ENSCPBG00000022580 PRRC2B (ENSCPBG00000021552) #26 POMT1 (ENSCPBG00000021526) #27 UCK1 (ENSCPBG00000021525) #28 RAPGEF1 (ENSCPBG00000021248) #30 MED27 (ENSCPBG00000021233) #31 NTNG2 (ENSCPBG00000021231) #32 SETX (ENSCPBG00000021225) #33 TTF1 (ENSCPBG00000021220) #34 ENSCPBG00000021218 #35 BARHL1 (ENSCPBG00000021217) #36 DDX31 (ENSCPBG00000021215) Three-toed box turtle MODERN SPECIES 113 C9orf78 (ENSTMTG00000015930) #9 USP20 (ENSTMTG00000016119) #10 FNBP1 (ENSTMTG00000018039) #11 ENSTMTG00000018240 #12 ENSTMTG00000018264 ENSTMTG00000018286 ASS1 (ENSTMTG00000018363) #14 FUBP3 (ENSTMTG00000018417) #15 PRDM12 (ENSTMTG00000018602) #16 EXOSC2 (ENSTMTG00000018617) #17 ABL1 (ENSTMTG00000018647) #18 ENSTMTG00000018695 QRFP (ENSTMTG00000018712) #19 FIBCD1 (ENSTMTG00000018722) #20 LAMC3 (ENSTMTG00000018760) #21 AIF1L (ENSTMTG00000018820) #22 NUP214 (ENSTMTG00000018852) #23 FAM78A (ENSTMTG00000018911) #24 PLPP7 (ENSTMTG00000018922) #25 PRRC2B (ENSTMTG00000018944) #26 POMT1 (ENSTMTG00000019058) #27 UCK1 (ENSTMTG00000019090) #28 PRRT1B (ENSTMTG00000019104) #29 RAPGEF1 (ENSTMTG00000019367) #30 MED27 (ENSTMTG00000021208) #31 NTNG2 (ENSTMTG00000021214) #32 SETX (ENSTMTG00000021223) #33 TTF1 (ENSTMTG00000021249) #34 ENSTMTG00000021258 #35 BARHL1 (ENSTMTG00000021267) #36 DDX31 (ENSTMTG00000021273) Testudinidae ANCESTRAL SPECIES 29 ENSGT00950000182888.a.a.a.j.b #8 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00950000183047.d #11 ENSGT00940000160451 #12 ENSGT00940000163010 ENSGT00940000162328 ENSGT00390000004524 #14 ENSGT00940000156744 #15 ENSGT00940000161616 #16 ENSGT00940000153596.B #17 ENSGT00940000153838.a #18 ENSGT00390000015756 #19 ENSGT00940000155976.a #20 ENSGT00940000161559 #21 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 ENSGT00940000156235 #30 ENSGT00390000012207 #31 ENSGT00940000153601.a.a #32 ENSGT00940000160918 #33 ENSGT00940000159729 #34 ENSGT00390000014476.a #35 ENSGT00940000160428 #36 ENSGT00550000075041 ENSGT00390000011873 #37 Goode s thornscrub tortoise MODERN SPECIES 7 TOR1A (ENSGEVG00005021226) #8 C9orf78 (ENSGEVG00005021227) #9 USP20 (ENSGEVG00005021231) #10 FNBP1 (ENSGEVG00005021238) #11 GPR107 (ENSGEVG00005021241) #12 ENSGEVG00005021244 ENSGEVG00005021253 ASS1 (ENSGEVG00005004170) #14 FUBP3 (ENSGEVG00005004241) #15 PRDM12 (ENSGEVG00005004371) #16 EXOSC2 (ENSGEVG00005004475) #17 ABL1 (ENSGEVG00005004543) #18 QRFP (ENSGEVG00005004613) #19 FIBCD1 (ENSGEVG00005004634) #20 LAMC3 (ENSGEVG00005004675) #21 AIF1L (ENSGEVG00005004766) #22 NUP214 (ENSGEVG00005004832) #23 FAM78A (ENSGEVG00005004902) #24 PLPP7 (ENSGEVG00005004913) #25 PRRC2B (ENSGEVG00005004949) #26 POMT1 (ENSGEVG00005005143) #27 UCK1 (ENSGEVG00005005247) #28 RAPGEF1 (ENSGEVG00005005647) #30 MED27 (ENSGEVG00005007043) #31 NTNG2 (ENSGEVG00005007066) #32 SETX (ENSGEVG00005007130) #33 TTF1 (ENSGEVG00005007201) #34 ENSGEVG00005007254 #35 BARHL1 (ENSGEVG00005007326) #36 DDX31 (ENSGEVG00005007355) GTF3C4 (ENSGEVG00005007435) #37 Abingdon island giant tortoise MODERN SPECIES 2008 C9orf78 (ENSCABG00000004719) #9 USP20 (ENSCABG00000004721) #10 FNBP1 (ENSCABG00000004726) #11 ENSCABG00000004729 ENSCABG00000004730 ENSCABG00000004735 ENSCABG00000004739 ASS1 (ENSCABG00000004741) #14 FUBP3 (ENSCABG00000004744) #15 PRDM12 (ENSCABG00000004747) #16 EXOSC2 (ENSCABG00000004748) #17 ABL1 (ENSCABG00000004751) #18 QRFP (ENSCABG00000005235) #19 FIBCD1 (ENSCABG00000005237) #20 LAMC3 (ENSCABG00000005244) #21 AIF1L (ENSCABG00000005252) #22 NUP214 (ENSCABG00000005258) #23 FAM78A (ENSCABG00000005267) #24 PLPP7 (ENSCABG00000005270) #25 PRRC2B (ENSCABG00000005273) #26 POMT1 (ENSCABG00000005336) #27 UCK1 (ENSCABG00000006089) #28 RAPGEF1 (ENSCABG00000006100) #30 Chinese turtle MODERN SPECIES 1463 TOR1A (ENSPSIG00000005705) #8 C9orf78 (ENSPSIG00000005885) #9 USP20 (ENSPSIG00000005924) #10 FNBP1 (ENSPSIG00000005955) #11 NCS1 (ENSPSIG00000006499) #13 ENSPSIG00000006548 ENSPSIG00000006562 ASS1 (ENSPSIG00000006577) #14 FUBP3 (ENSPSIG00000006734) #15 PRDM12 (ENSPSIG00000006739) #16 EXOSC2 (ENSPSIG00000006743) #17 ABL1 (ENSPSIG00000007040) #18 FIBCD1 (ENSPSIG00000007046) #20 ENSPSIG00000007155 #21 ENSPSIG00000007386 AIF1L (ENSPSIG00000007393) #22 NUP214 (ENSPSIG00000007417) #23 FAM78A (ENSPSIG00000007753) #24 PLPP7 (ENSPSIG00000007770) #25 PRRC2B (ENSPSIG00000007798) #26 POMT1 (ENSPSIG00000008324) #27 UCK1 (ENSPSIG00000008335) #28 RAPGEF1 (ENSPSIG00000008426) #30 ENSPSIG00000001691 Coelacanth MODERN SPECIES 294 REXO4 (ENSLACG00000012399) STKLD1 (ENSLACG00000012507) SURF4 (ENSLACG00000012795) SURF2 (ENSLACG00000012991) MED22 (ENSLACG00000013089) SURF6 (ENSLACG00000013322) ENSLACG00000013477 ENSLACG00000014050 ralgds (ENSLACG00000015113) CEL (ENSLACG00000015289) GTF3C5 (ENSLACG00000015421) EXOSC2 (ENSLACG00000015530) #17 ABL1 (ENSLACG00000015645) #18 FIBCD1 (ENSLACG00000016162) #20 LAMC3 (ENSLACG00000016542) #21 AIF1L (ENSLACG00000016786) #22 ENSLACG00000016871 FAM78A (ENSLACG00000017133) #24 PLPP7 (ENSLACG00000017166) #25 PRRC2B (ENSLACG00000017307) #26 POMT1 (ENSLACG00000017422) #27 UCK1 (ENSLACG00000017478) #28 PRRT1B (ENSLACG00000017529) #29 RAPGEF1 (ENSLACG00000017553) #30 MED27 (ENSLACG00000017856) #31 NTNG2 (ENSLACG00000018040) #32 SETX (ENSLACG00000018129) #33 Actinopterygii ANCESTRAL SPECIES 459 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 Neopterygii ANCESTRAL SPECIES 382 ENSGT00390000013846.a.a #22 ENSGT00940000153253.b.b #23 ENSGT00390000018059.a #24 ENSGT00940000157147 #25 ENSGT00950000183161.a.b #26 ENSGT00940000158049 #27 ENSGT01020000230412.A.c.a #28 Osteoglossocephalai ANCESTRAL SPECIES 23 ENSGT00940000161643 ENSGT00940000155945.j ENSGT00940000157955.d.a ENSGT00940000160616 ENSGT00940000154079.b ENSGT00940000155946 ENSGT00530000064359.c.b ENSGT00930000151016 ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 Clupeocephala ANCESTRAL SPECIES 156 ENSGT00530000064194 ENSGT00940000155193 ENSGT00990000204427 ENSGT00940000153294 ENSGT00390000004339 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 Otomorpha ANCESTRAL SPECIES 226 ENSGT00530000064194 ENSGT00940000155193 ENSGT00990000204427 ENSGT00940000153294 ENSGT00390000004339 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 Otophysi ANCESTRAL SPECIES 100 ENSGT00940000158797 ENSGT00390000006980 ENSGT00530000064194 ENSGT00940000153294 ENSGT00390000004339 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00390000015513.a.b.b Characiphysae ANCESTRAL SPECIES 56 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00990000205129 ENSGT00940000153491.b.b.a ENSGT00950000183135.A.a ENSGT00390000017523 ENSGT01030000234555.a.a.a.c.a ENSGT00940000153592.B.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00390000015513.a.b.b Channel catfish MODERN SPECIES 20 aspa (ENSIPUG00000024083) abr (ENSIPUG00000024090) ENSIPUG00000024113 zswim7 (ENSIPUG00000024116) adora2b (ENSIPUG00000024117) specc1 (ENSIPUG00000024119) DAB2IP (ENSIPUG00000024124) ENSIPUG00000024126 ttll11 (ENSIPUG00000024127) ENSIPUG00000024128 garnl3 (ENSIPUG00000024135) zgc:63972 (ENSIPUG00000024144) ENSIPUG00000024145 fibcd1b (ENSIPUG00000024146) ##20 LAMC3 (ENSIPUG00000024147) aif1l (ENSIPUG00000024152) #22 gfm2 (ENSIPUG00000024153) hexb (ENSIPUG00000024169) ENSIPUG00000005629 ENSIPUG00000005649 ENSIPUG00000005658 ENSIPUG00000005666 ENSIPUG00000005678 Enc1 (ENSIPUG00000005692) ENSIPUG00000005712 ENSIPUG00000005715 arhgef28 (ENSIPUG00000005745) ankra2 (ENSIPUG00000005849) Btf3 (ENSIPUG00000005877) foxd1 (ENSIPUG00000005902) fcho2 (ENSIPUG00000005934) Characiphysae_b ANCESTRAL SPECIES 56 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00990000205129 ENSGT00940000153491.b.b.a ENSGT00950000183135.A.a ENSGT00390000017523 ENSGT01030000234555.a.a.a.c.a ENSGT00940000153592.B.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00390000015513.a.b.b Characoidei ANCESTRAL SPECIES 39 ENSGT00390000001189.a ENSGT00990000205129 ENSGT00940000153491.b.b.a ENSGT00950000183135.A.a ENSGT00390000017523 ENSGT01030000234555.a.a.a.c.a ENSGT00940000153592.B.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00880000138014.a ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00390000015513.a.b.b Red-bellied piranha MODERN SPECIES 2 ENSPNAG00000017122 ABR (ENSPNAG00000017401) ENSPNAG00000017440 zswim7 (ENSPNAG00000017450) adora2b (ENSPNAG00000017460) SPECC1 (ENSPNAG00000017516) dab2ipb (ENSPNAG00000007041) ttll11 (ENSPNAG00000017759) ENSPNAG00000017780 garnl3 (ENSPNAG00000018040) zgc:63972 (ENSPNAG00000018062) ENSPNAG00000018074 fibcd1b (ENSPNAG00000018104) ##20 si:ch211-122f10.4 (ENSPNAG00000018259) ENSPNAG00000018368 aif1l (ENSPNAG00000018392) #22 gfm2 (ENSPNAG00000018467) hexb (ENSPNAG00000018571) ENC1 (ENSPNAG00000018598) ENSPNAG00000018943 ENSPNAG00000021129 ENSPNAG00000021200 ARHGEF28 (ENSPNAG00000021256) ENSPNAG00000021279 ENSPNAG00000021287 ankra2 (ENSPNAG00000021321) btf3 (ENSPNAG00000006350) foxd1 (ENSPNAG00000021362) TMEM174 (ENSPNAG00000006042) fcho2 (ENSPNAG00000021417) TNPO1 (ENSPNAG00000021484) Mexicana tetra MODERN SPECIES 137 ENSAMXG00000029189 ENSAMXG00000028691 ENSAMXG00000042581 ENSAMXG00000030544 ENSAMXG00000035005 ENSAMXG00000008513 garnl3 (ENSAMXG00000008524) ENSAMXG00000035505 zgc:63972 (ENSAMXG00000035088) fibcd1b (ENSAMXG00000008551) ##20 ENSAMXG00000037479 ENSAMXG00000038426 si:ch211-122f10.4 (ENSAMXG00000010010) ENSAMXG00000009995 aif1l (ENSAMXG00000036936) #22 gfm2 (ENSAMXG00000009979) hexb (ENSAMXG00000036341) ENC1 (ENSAMXG00000009945) ENSAMXG00000033617 ARHGEF28 (ENSAMXG00000009924) ENSAMXG00000009913 ankra2 (ENSAMXG00000009909) btf3 (ENSAMXG00000043535) foxd1 (ENSAMXG00000025555) TMEM174 (ENSAMXG00000042241) fcho2 (ENSAMXG00000009862) TNPO1 (ENSAMXG00000009842) ptcd2 (ENSAMXG00000029404) MAP1B (ENSAMXG00000030234) ENSAMXG00000030056 Electric eel MODERN SPECIES 76 ENSEEEG00000005314 zgc:85789 (ENSEEEG00000005323) aspa (ENSEEEG00000005343) ABR (ENSEEEG00000005393) NANOS2 (ENSEEEG00000006893) zswim7 (ENSEEEG00000006894) adora2b (ENSEEEG00000006897) SPECC1 (ENSEEEG00000006899) dab2ipb (ENSEEEG00000006903) ttll11 (ENSEEEG00000006984) ENSEEEG00000006985 garnl3 (ENSEEEG00000006987) zgc:63972 (ENSEEEG00000006988) fibcd1b (ENSEEEG00000006990) ##20 ENSEEEG00000006992 aif1l (ENSEEEG00000006994) #22 gfm2 (ENSEEEG00000006995) hexb (ENSEEEG00000007002) ENSEEEG00000007306 ENSEEEG00000007315 ENSEEEG00000007324 taf6 (ENSEEEG00000007330) ENSEEEG00000007344 ENSEEEG00000007346 sat2b (ENSEEEG00000007348) ENSEEEG00000007351 naa38 (ENSEEEG00000007354) ENSEEEG00000007356 Cyprinoidei ANCESTRAL SPECIES 19 ENSGT00390000006980 ENSGT00530000064194 ENSGT00940000153294 ENSGT00390000004339 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000158715.f ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105.a ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00390000015513.a.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00390000006980.c ENSGT00530000064194.g ENSGT00940000153294.h ENSGT00390000004339.s ENSGT00390000009787.cb #9 ENSGT00940000158829.a #10 ENSGT00390000011980.b.b.a ENSGT00940000159362.g ENSGT00940000164999.g ENSGT00940000156689.d ENSGT00940000155853.d.a.f ENSGT00940000158715.f ENSGT00390000017030.b.a.h ENSGT00940000155976.b.a.b.a ##20 ENSGT00940000166104.`b ENSGT00390000013846.a.a.a #22 ENSGT00550000074890.c ENSGT00390000008107.c.a.a.a ENSGT00950000182983.B.a.b.g ENSGT00940000166104.ab ENSGT00390000013846.a.a.b.a.a #22 ENSGT00550000074890.d ENSGT00390000008107.c.a.b ENSGT00950000182983.B.a.b.h ENSGT00940000155831.cb ENSGT00940000157156.t ENSGT00940000153288.a.b.a.b ENSGT00940000153288.a.b.b ENSGT00940000157140.b.a.b.b.a ENSGT00390000004161.e ENSGT00940000157105.a.b Cyprininae_a ANCESTRAL SPECIES ENSGT00940000158797.v ENSGT00390000006980.c ENSGT00530000064194.g ENSGT00390000004339.s ENSGT00390000009787.cb #9 ENSGT00940000158829.a #10 ENSGT00390000011980.b.b.a ENSGT00940000159362.g ENSGT00940000164999.g ENSGT00940000156689.d ENSGT00940000155853.d.a.f ENSGT00940000158715.f ENSGT00390000017030.b.a.h ENSGT00940000155976.b.a.b.a ##20 ENSGT00940000166104.`b ENSGT00390000013846.a.a.a #22 ENSGT00550000074890.c ENSGT00390000008107.c.a.a.a ENSGT00950000182983.B.a.b.g ENSGT00940000155831.cb.f ENSGT00940000157156.t ENSGT00940000153288.a.b.a.b ENSGT00940000153288.a.b.b ENSGT00940000157140.b.a.b.b.a ENSGT00390000004161.e ENSGT00940000157105.b ENSGT00940000157105.a.b ENSGT00940000155389.u ENSGT00390000009329.c ENSGT00940000155897.ob ENSGT01050000244902.a.a.a.a.a.a.a Golden-line barbel MODERN SPECIES 1508 ENSSGRG00000019117 aif1l (ENSSGRG00000019114) #22 gfm2 (ENSSGRG00000019111) hexb (ENSSGRG00000018191) ENC1 (ENSSGRG00000018165) Goldfish MODERN SPECIES 44 RPL7A (ENSCARG00000000600) med22 (ENSCARG00000000632) zgc:103692 (ENSCARG00000000655) #9 usp20 (ENSCARG00000000727) #10 ptges (ENSCARG00000000808) garnl3 (ENSCARG00000000939) ENSCARG00000001266 ENSCARG00000001269 ENSCARG00000001272 ttll11 (ENSCARG00000001281) ENSCARG00000001291 dab2ipb (ENSCARG00000001453) ENSCARG00000002358 fibcd1b (ENSCARG00000002373) ##20 ENSCARG00000002393 aif1l (ENSCARG00000002402) #22 gfm2 (ENSCARG00000002432) hexb (ENSCARG00000002521) ENC1 (ENSCARG00000002975) ENSCARG00000002979 ankra2 (ENSCARG00000003016) BTF3 (ENSCARG00000003078) foxd1 (ENSCARG00000003086) TMEM174 (ENSCARG00000003088) fcho2 (ENSCARG00000003236) TNPO1 (ENSCARG00000004811) ptcd2 (ENSCARG00000004842) MAP1B (ENSCARG00000004853) ptger4b (ENSCARG00000004862) ttc33 (ENSCARG00000004866) fbp1b (ENSCARG00000004876) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000158829.a #10 ENSGT00390000011980.b.b.a ENSGT00940000159362.g ENSGT00940000164999.g ENSGT00940000156689.d ENSGT00940000155853.d.a.f ENSGT00940000158715.f ENSGT00390000017030.b.a.h ENSGT00940000155976.b.a.b.a ##20 ENSGT00940000166104.`b ENSGT00390000013846.a.a.a #22 ENSGT00550000074890.c ENSGT00390000008107.c.a.a.a ENSGT00950000182983.B.a.b.g ENSGT00940000166104.ab ENSGT00390000013846.a.a.b.a.a #22 ENSGT00550000074890.d ENSGT00390000008107.c.a.b ENSGT00950000182983.B.a.b.h ENSGT00940000155831.cb ENSGT00940000157156.t ENSGT00940000153288.a.b.a.b ENSGT00940000153288.a.b.b ENSGT00940000157140.b.a.b.b.a ENSGT00390000004161.e ENSGT00940000157105.a.b ENSGT00940000155389.u ENSGT00390000009329.c ENSGT00940000155897.ob ENSGT01050000244902.a.a.a.a.a.a.a ENSGT00390000017462.c.b Cyprininae_a ANCESTRAL SPECIES 22 ENSGT00940000158797.u ENSGT00390000006980.d ENSGT00530000064194.h ENSGT00940000153294.g ENSGT00390000004339.t ENSGT00390000009787.bb #9 ENSGT00940000158829.b #10 ENSGT00390000011980.b.b.b ENSGT00940000159362.h ENSGT00940000164999.h ENSGT00940000156689.c ENSGT00940000155853.d.a.e ENSGT00390000017030.b.a.g ENSGT00940000155976.b.a.b.b ##20 ENSGT00940000166104.ab ENSGT00390000013846.a.a.b.a.a #22 ENSGT00550000074890.d ENSGT00390000008107.c.a.b ENSGT00950000182983.B.a.b.h ENSGT00940000155831.cb.e ENSGT00940000157156.s ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b.b ENSGT00390000004161.f ENSGT00940000157105.a.a ENSGT00940000155389.v ENSGT00390000009329.d ENSGT00940000155897.pb ENSGT01050000244902.a.a.a.a.a.a.b ENSGT00390000017462.c.a ENSGT00390000015513.a.b.b.d Common carp reference MODERN SPECIES 15 ENSCCRG00000057824 med22 (ENSCCRG00000034299) zgc:103692 (ENSCCRG00000057134) #9 usp20 (ENSCCRG00000033287) #10 ptges (ENSCCRG00000077847) garnl3 (ENSCCRG00000034141) ENSCCRG00000077186 ENSCCRG00000064986 ms4a17c.1 (ENSCCRG00000049327) ENSCCRG00000075726 ttll11 (ENSCCRG00000010997) dab2ipb (ENSCCRG00000067214) zgc:63972 (ENSCCRG00000006166) fibcd1b (ENSCCRG00000027791) ##20 ENSCCRG00000031576 aif1l (ENSCCRG00000054022) #22 gfm2 (ENSCCRG00000073938) hexb (ENSCCRG00000042561) ENC1 (ENSCCRG00000062411) ARHGEF28 (ENSCCRG00000042724) ankra2 (ENSCCRG00000000495) btf3 (ENSCCRG00000006502) foxd1 (ENSCCRG00000000471) TMEM174 (ENSCCRG00000081077) fcho2 (ENSCCRG00000057250) TNPO1 (ENSCCRG00000027471) ptcd2 (ENSCCRG00000058423) ENSCCRG00000061475 ptger4b (ENSCCRG00000062674) ttc33 (ENSCCRG00000012034) fbp1b (ENSCCRG00000070140) Goldfish MODERN SPECIES 1591 ENSCARG00000043063 aif1l (ENSCARG00000043229) #22 gfm2 (ENSCARG00000043413) hexb (ENSCARG00000043583) ENC1 (ENSCARG00000046156) Cyprininae ANCESTRAL SPECIES ENSGT00390000013846.a.a.b.a.b #22 Goldfish MODERN SPECIES 23 ENSCARG00000006677 rab8b (ENSCARG00000006687) trpm1a (ENSCARG00000006745) GTF2A2 (ENSCARG00000007148) foxb1b (ENSCARG00000007164) ENSCARG00000007167 anxa2b (ENSCARG00000007178) rorab (ENSCARG00000007313) tln2a (ENSCARG00000009522) tpma (ENSCARG00000013993) ENSCARG00000014195 isl2b (ENSCARG00000014202) pstpip1b (ENSCARG00000014206) ENSCARG00000014217 ENSCARG00000014232 aif1l (ENSCARG00000014358) #22 gfm2 (ENSCARG00000014394) hexb (ENSCARG00000014602) ENC1 (ENSCARG00000015330) ARHGEF28 (ENSCARG00000015340) ankra2 (ENSCARG00000015382) btf3 (ENSCARG00000015419) foxd1 (ENSCARG00000015431) TMEM174 (ENSCARG00000015432) fcho2 (ENSCARG00000015503) TNPO1 (ENSCARG00000018581) ptcd2 (ENSCARG00000018767) MAP1B (ENSCARG00000018778) ptger4b (ENSCARG00000018787) ttc33 (ENSCARG00000018793) fbp1b (ENSCARG00000018806) Cyprininae ANCESTRAL SPECIES ENSGT00390000013846.a.a.b.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000013846.a.a.b.b #22 Golden-line barbel MODERN SPECIES 11 kyat1 (ENSSGRG00000046159) surf6 (ENSSGRG00000046151) surf1 (ENSSGRG00000046150) RPL7A (ENSSGRG00000045999) med22 (ENSSGRG00000045998) zgc:103692 (ENSSGRG00000045997) #9 usp20 (ENSSGRG00000045154) #10 ptges (ENSSGRG00000045144) garnl3 (ENSSGRG00000045142) ENSSGRG00000045139 ttll11 (ENSSGRG00000045137) dab2ipb (ENSSGRG00000044555) zgc:63972 (ENSSGRG00000044552) fibcd1b (ENSSGRG00000044220) ##20 ENSSGRG00000044213 aif1l (ENSSGRG00000044209) #22 gfm2 (ENSSGRG00000044182) hexb (ENSSGRG00000044176) ENC1 (ENSSGRG00000044174) ARHGEF28 (ENSSGRG00000044170) ankra2 (ENSSGRG00000044064) btf3 (ENSSGRG00000044047) foxd1 (ENSSGRG00000044046) TMEM174 (ENSSGRG00000044045) fcho2 (ENSSGRG00000043664) TNPO1 (ENSSGRG00000043568) ptcd2 (ENSSGRG00000043561) MAP1B (ENSSGRG00000043557) ptger4b (ENSSGRG00000043555) ttc33 (ENSSGRG00000043552) fbp1b (ENSSGRG00000043551) Zebrafish MODERN SPECIES 20 C5H9orf78 (ENSDARG00000002220) #9 usp20 (ENSDARG00000027501) #10 ptges (ENSDARG00000020136) garnl3 (ENSDARG00000060631) ENSDARG00000093512 ENSDARG00000028659 ENSDARG00000092593 ms4a17c.1 (ENSDARG00000094643) ENSDARG00000022085 ttll11 (ENSDARG00000060374) dab2ipb (ENSDARG00000075110) si:dkeyp-72a4.1 (ENSDARG00000093985) zgc:63972 (ENSDARG00000054288) fibcd1b (ENSDARG00000060393) ##20 ENSDARG00000093572 aif1l (ENSDARG00000009336) #22 gfm2 (ENSDARG00000005561) hexb (ENSDARG00000034368) ENC1 (ENSDARG00000035398) ARHGEF28 (ENSDARG00000060415) ankra2 (ENSDARG00000035399) btf3 (ENSDARG00000035400) foxd1 (ENSDARG00000029179) TMEM174 (ENSDARG00000035388) fcho2 (ENSDARG00000035389) TNPO1 (ENSDARG00000035390) ptcd2 (ENSDARG00000035391) map1b (ENSDARG00000060434) ptger4b (ENSDARG00000035415) ttc33 (ENSDARG00000035406) fbp1b (ENSDARG00000020364) Clupeiformes ANCESTRAL SPECIES 39 ENSGT00940000158797 ENSGT00530000064194 ENSGT00990000204427 ENSGT00940000153294 ENSGT00390000004339 ENSGT00390000009787 #9 ENSGT00940000158829 #10 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00550000074890 ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00390000004161 ENSGT00940000157105 ENSGT00940000155389 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 Denticle herring MODERN SPECIES 13 prkaa1 (ENSDCDG00000023689) kyat1 (ENSDCDG00000023763) surf1 (ENSDCDG00000023772) RPL7A (ENSDCDG00000023776) zgc:103692 (ENSDCDG00000023789) #9 usp20 (ENSDCDG00000023804) #10 ptges (ENSDCDG00000023895) garnl3 (ENSDCDG00000023947) ENSDCDG00000025702 ttll11 (ENSDCDG00000025705) dab2ipb (ENSDCDG00000025793) zgc:63972 (ENSDCDG00000027594) fibcd1b (ENSDCDG00000027599) ##20 ENSDCDG00000027613 ENSDCDG00000027627 aif1l (ENSDCDG00000027629) #22 gfm2 (ENSDCDG00000027646) hexb (ENSDCDG00000027690) ENC1 (ENSDCDG00000027922) ARHGEF28 (ENSDCDG00000027930) ankra2 (ENSDCDG00000027948) btf3 (ENSDCDG00000027954) foxd1 (ENSDCDG00000027955) TMEM174 (ENSDCDG00000027957) fcho2 (ENSDCDG00000027988) TNPO1 (ENSDCDG00000028773) ptcd2 (ENSDCDG00000029276) MAP1B (ENSDCDG00000029278) ENSDCDG00000029284 ptger4b (ENSDCDG00000029286) ttc33 (ENSDCDG00000029288) Atlantic herring MODERN SPECIES 3 FBN2 (ENSCHAG00000013394) SLC27A3 (ENSCHAG00000013135) slc27a6 (ENSCHAG00000012692) isoc1 (ENSCHAG00000012596) ADAMTS19 (ENSCHAG00000012426) MINAR2 (ENSCHAG00000012382) chsy3 (ENSCHAG00000012332) hint1 (ENSCHAG00000012294) ENSCHAG00000012287 ttll11 (ENSCHAG00000012269) ENSCHAG00000012223 dab2ipb (ENSCHAG00000011875) zgc:63972 (ENSCHAG00000011860) fibcd1b (ENSCHAG00000011845) ##20 ENSCHAG00000011841 aif1l (ENSCHAG00000011793) #22 gfm2 (ENSCHAG00000011498) hexb (ENSCHAG00000011143) fam136a (ENSCHAG00000011118) gmcl1 (ENSCHAG00000010832) eri1 (ENSCHAG00000010804) MFHAS1 (ENSCHAG00000010800) rpl17 (ENSCHAG00000010742) mef2ca (ENSCHAG00000010634) cetn3 (ENSCHAG00000010592) arrdc3b (ENSCHAG00000010510) nr2f1b (ENSCHAG00000010335) TLR8 (ENSCHAG00000010070) MCTP1 (ENSCHAG00000009821) ENSCHAG00000009797 septin5b (ENSCHAG00000009078) Euteleosteomorpha ANCESTRAL SPECIES 152 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000159607 ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00390000008726.h.a ENSGT00940000160015 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00950000183012.A.a.c.a.d ENSGT00940000157488.h ENSGT00940000153745.a.b ENSGT00940000153372.B ENSGT00530000063672.b ENSGT00550000074946 ENSGT00940000158323.g ENSGT00940000166967 ENSGT00390000010474 ENSGT00940000164321.d ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529.k ENSGT00940000159607 ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382.r ENSGT00390000006452.b.a ENSGT00390000008726.h.a ENSGT00940000160015 Northern pike MODERN SPECIES 13 VPS37B (ENSELUG00000004596) SLC4A5 (ENSELUG00000004546) tacr1b (ENSELUG00000004438) scarb1 (ENSELUG00000004383) ENSELUG00000004179 ddx56 (ENSELUG00000004150) aebp1a (ENSELUG00000004116) pnx (ENSELUG00000004093) ash2l (ENSELUG00000004078) grk5 (ENSELUG00000004063) ttll11 (ENSELUG00000004044) dab2ipb (ENSELUG00000004001) zgc:63972 (ENSELUG00000033891) fibcd1b (ENSELUG00000003797) ##20 ENSELUG00000003762 aif1l (ENSELUG00000003687) #22 prkaa1 (ENSELUG00000003662) ttc33 (ENSELUG00000003639) ptger4b (ENSELUG00000003604) MAP1B (ENSELUG00000000124) ptcd2 (ENSELUG00000003584) CACFD1 (ENSELUG00000003557) ENSELUG00000003539 FNBP1 (ENSELUG00000003481) #11 COL5A1 (ENSELUG00000003331) ENSELUG00000003285 ENSELUG00000003257 ppp1r26 (ENSELUG00000003244) mrps2 (ENSELUG00000003223) dipk1b (ENSELUG00000003199) agpat2 (ENSELUG00000003185) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00390000013846.a.a.c #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000013846.a.a.c #22 Salmo ANCESTRAL SPECIES ENSGT00390000013846.a.a.c #22 Atlantic salmon MODERN SPECIES vps37bb (ENSSSAG00000110223) ENSSSAG00000076766 tacr1b (ENSSSAG00000077278) scarb1 (ENSSSAG00000077279) ENSSSAG00000077274 ENSSSAG00000090020 aebp1a (ENSSSAG00000077313) pnx (ENSSSAG00000077331) ash2l (ENSSSAG00000077346) grk5 (ENSSSAG00000077528) ENSSSAG00000077946 dab2ipb (ENSSSAG00000078000) zgc:63972 (ENSSSAG00000078240) fibcd1b (ENSSSAG00000078244) ##20 ENSSSAG00000078277 aif1l (ENSSSAG00000120599) #22 ENSSSAG00000078530 ttc33 (ENSSSAG00000078559) ptger4b (ENSSSAG00000078561) ENSSSAG00000094409 ENSSSAG00000078562 ptcd2 (ENSSSAG00000084732) ENSSSAG00000078573 ENSSSAG00000078575 ENSSSAG00000078637 #11 COL5A1 (ENSSSAG00000079384) ENSSSAG00000079410 ENSSSAG00000079417 ppp1r26 (ENSSSAG00000079421) mrps2 (ENSSSAG00000079426) dipk1b (ENSSSAG00000079431) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 726 ENSGT00940000156689.j ENSGT00940000155853.d.a.c ENSGT00390000017030.b.a.e ENSGT00940000155976.b.a.b.c ##20 ENSGT00940000166104.a ENSGT00390000013846.a.a.d.a #22 ENSGT00940000158865.m ENSGT00390000017462.f ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00940000155897.qb.a ENSGT00390000009329.e Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00950000183012.A.a.c.a.c ENSGT00940000157488.h.e ENSGT00940000153745.a.b.c ENSGT00940000153372.B.k ENSGT00530000063672.b ENSGT00390000015164.cb ENSGT00940000158323.g.d ENSGT00940000166967.b ENSGT00390000010474.b ENSGT00940000164321.d.c ENSGT00940000156689.j ENSGT00940000155853.d.a.c ENSGT00390000017030.b.a.e ENSGT00940000155976.b.a.b.c ##20 ENSGT00940000166104.a ENSGT00390000013846.a.a.d.a #22 ENSGT00940000158865.m ENSGT00390000017462.f ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00940000155897.qb.a ENSGT00390000009329.e ENSGT00390000000529.k ENSGT00940000159607.p ENSGT01040000240782.a.a ENSGT00950000183047.d.e.b #11 ENSGT00940000159211.C.nb.a.a ENSGT00940000156959.A.k.b ENSGT00390000014118.g ENSGT00390000017382.r.a ENSGT00390000006452.b.a.c ENSGT00390000008726.h.a.e Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00950000183012.A.a.c.a.c ENSGT00940000157488.h.e ENSGT00940000153745.a.b.c ENSGT00940000153372.B.k ENSGT00530000063672.b ENSGT00390000015164.cb ENSGT00940000158323.g.d ENSGT00940000166967.b ENSGT00390000010474.b ENSGT00940000164321.d.c ENSGT00940000156689.j ENSGT00940000155853.d.a.c ENSGT00390000017030.b.a.e ENSGT00940000155976.b.a.b.c ##20 ENSGT00940000166104.a ENSGT00390000013846.a.a.d.a #22 ENSGT00940000158865.m ENSGT00390000017462.f ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00940000155897.qb.a ENSGT00390000009329.e ENSGT00390000000529.k ENSGT00940000159607.p ENSGT01040000240782.a.a ENSGT00950000183047.d.e.b #11 ENSGT00940000159211.C.nb.a.a ENSGT00940000156959.A.k.b ENSGT00940000181901 ENSGT00390000017382.r.a ENSGT00390000006452.b.a.c ENSGT00390000008726.h.a.e Rainbow trout MODERN SPECIES 26 ykt6 (ENSOMYG00000002351) aebp1a (ENSOMYG00000002325) pnx (ENSOMYG00000002247) ENSOMYG00000055859 ash2l (ENSOMYG00000001996) grk5 (ENSOMYG00000001256) ENSOMYG00000049407 ENSOMYG00000062616 ENSOMYG00000049737 ENSOMYG00000066103 dab2ipb (ENSOMYG00000001077) zgc:63972 (ENSOMYG00000001051) ENSOMYG00000001044 fibcd1b (ENSOMYG00000001035) ##20 ENSOMYG00000001015 aif1l (ENSOMYG00000063369) #22 ENSOMYG00000000937 ttc33 (ENSOMYG00000000870) ptger4b (ENSOMYG00000000842) ENSOMYG00000000835 ptcd2 (ENSOMYG00000000822) ENSOMYG00000000825 ENSOMYG00000000798 ENSOMYG00000000782 ENSOMYG00000000746 #11 ENSOMYG00000060688 ENSOMYG00000058119 ENSOMYG00000000649 ENSOMYG00000051599 ENSOMYG00000048497 ENSOMYG00000048192 Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00980000199093 ENSGT00940000157488.h.e ENSGT00940000153745.a.b.c ENSGT00940000153372.B.k ENSGT00530000063672.b ENSGT00390000015164.cb ENSGT00940000158323.g.d ENSGT00940000166967.b ENSGT00390000010474.b ENSGT00940000164321.d.c ENSGT00940000156689.j ENSGT00940000155853.d.a.c ENSGT00390000017030.b.a.e ENSGT00940000155976.b.a.b.c ##20 ENSGT00940000166104.a ENSGT00390000013846.a.a.d.a #22 ENSGT00940000158865.m ENSGT00390000017462.f ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00940000155897.qb.a ENSGT00390000009329.e ENSGT00390000000529.k ENSGT00940000159607.p ENSGT01040000240782.a.a ENSGT00950000183047.d.e.b #11 ENSGT00940000159211.C.nb.a.a ENSGT00940000156959.A.k.b ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.d.c ENSGT00390000014118.g ENSGT00390000017382.r.a ENSGT00390000006452.b.a.c Coho salmon MODERN SPECIES 15 tacr1b (ENSOKIG00005034970) scarb1 (ENSOKIG00005035029) ENSOKIG00005035143 ykt6 (ENSOKIG00005035169) aebp1a (ENSOKIG00005023984) ENSOKIG00005024018 pnx (ENSOKIG00005024029) ash2l (ENSOKIG00005024129) grk5 (ENSOKIG00005025562) ENSOKIG00005028347 dab2ipb (ENSOKIG00005028377) zgc:63972 (ENSOKIG00005028571) fibcd1b (ENSOKIG00005028581) ##20 ENSOKIG00005028595 ENSOKIG00005028630 aif1l (ENSOKIG00005028700) #22 PRKAA1 (ENSOKIG00005028729) ttc33 (ENSOKIG00005028772) ptger4b (ENSOKIG00005028779) MAP1B (ENSOKIG00005028799) ENSOKIG00005028811 CACFD1 (ENSOKIG00005028829) ENSOKIG00005028838 ENSOKIG00005028856 FNBP1 (ENSOKIG00005028971) #11 ENSOKIG00005030948 ENSOKIG00005030972 ENSOKIG00005031025 ENSOKIG00005031070 ppp1r26 (ENSOKIG00005031085) mrps2 (ENSOKIG00005031112) Chinook salmon MODERN SPECIES 12 acads (ENSOTSG00005017558) crybb1 (ENSOTSG00005017553) npm2b (ENSOTSG00005017551) ENSOTSG00005017520 tpst2 (ENSOTSG00005017518) ENSOTSG00005017517 ENSOTSG00005017516 VPS37B (ENSOTSG00005017515) scarb1 (ENSOTSG00005017463) ENSOTSG00005017455 ykt6 (ENSOTSG00005017452) aebp1a (ENSOTSG00005017449) zgc:63972 (ENSOTSG00005040838) fibcd1b (ENSOTSG00005040836) ##20 ENSOTSG00005040835 aif1l (ENSOTSG00005040834) #22 prkaa1 (ENSOTSG00005040716) ttc33 (ENSOTSG00005040709) ptger4b (ENSOTSG00005040707) ENSOTSG00005040706 ptcd2 (ENSOTSG00005040705) CACFD1 (ENSOTSG00005040704) ENSOTSG00005040703 ENSOTSG00005040699 FNBP1 (ENSOTSG00005040294) #11 ENSOTSG00005040289 ENSOTSG00005040288 ENSOTSG00005040286 ENSOTSG00005040285 ppp1r26 (ENSOTSG00005040283) mrps2 (ENSOTSG00005040282) Salmo ANCESTRAL SPECIES ENSGT00950000183012.A.a.c.a.c ENSGT00940000157488.h.e ENSGT00940000153745.a.b.c ENSGT00940000153372.B.k ENSGT00530000063672.b ENSGT00390000015164.cb ENSGT00940000158323.g.d ENSGT00940000166967.b ENSGT00390000010474.b ENSGT00940000164321.d.c ENSGT00940000156689.j ENSGT00940000155853.d.a.c ENSGT00390000017030.b.a.e ENSGT00940000155976.b.a.b.c ##20 ENSGT00940000166104.a ENSGT00390000013846.a.a.d.a #22 ENSGT00940000158865.m ENSGT00390000017462.f ENSGT01050000244902.a.a.a.a.a.a.c ENSGT00940000155897.qb.a ENSGT00390000009329.e ENSGT00390000000529.k ENSGT00940000159607.p ENSGT01040000240782.a.a ENSGT00950000183047.d.e.b #11 ENSGT00940000159211.C.nb.a.a ENSGT00940000156959.A.k.b ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.d ENSGT00390000014118.g ENSGT00390000017382.r.a ENSGT00390000006452.b.a.c River trout MODERN SPECIES 15 vps37bb (ENSSTUG00000046910) SLC4A5 (ENSSTUG00000047036) tacr1b (ENSSTUG00000049307) scarb1 (ENSSTUG00000049332) ENSSTUG00000049423 ykt6 (ENSSTUG00000049426) aebp1a (ENSSTUG00000049429) pnx (ENSSTUG00000049430) ash2l (ENSSTUG00000049438) grk5 (ENSSTUG00000049462) ENSSTUG00000049527 dab2ipb (ENSSTUG00000049550) zgc:63972 (ENSSTUG00000049642) fibcd1b (ENSSTUG00000049644) ##20 ENSSTUG00000049655 aif1l (ENSSTUG00000049699) #22 prkaa1 (ENSSTUG00000049706) ttc33 (ENSSTUG00000049742) ptger4b (ENSSTUG00000049744) MAP1B (ENSSTUG00000049747) CACFD1 (ENSSTUG00000049750) ENSSTUG00000049754 ENSSTUG00000035403 ENSSTUG00000035409 FNBP1 (ENSSTUG00000035432) #11 COL5A1 (ENSSTUG00000035555) ENSSTUG00000035601 ppp1r26 (ENSSTUG00000035633) mrps2 (ENSSTUG00000035638) dipk1b (ENSSTUG00000035651) agpat2 (ENSSTUG00000035662) Huchen MODERN SPECIES 1281 ENSHHUG00000041342 aif1l (ENSHHUG00000041358) #22 prkaa1 (ENSHHUG00000041362) ttc33 (ENSHHUG00000041370) ptger4b (ENSHHUG00000041378) Salmoninae ANCESTRAL SPECIES 869 ENSGT00390000017030.b.a.f ENSGT00940000155976.b.a.b.d ##20 ENSGT00940000166104.b ENSGT00390000013846.a.a.d.b #22 ENSGT00940000158865.n ENSGT00390000017462.e ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00940000155897.qb.b Salmoninae_a ANCESTRAL SPECIES 80 ENSGT00950000182825.B.g.b ENSGT00950000183012.A.a.c.a.d ENSGT00940000157488.h.f ENSGT00940000153745.a.b.d ENSGT00940000153372.B.l ENSGT00550000074946 ENSGT00940000158323.g.c ENSGT00940000166967.a ENSGT00390000010474.a ENSGT00940000164321.d.d ENSGT00940000156689.i ENSGT00940000155853.d.a.d ENSGT00390000017030.b.a.f ENSGT00940000155976.b.a.b.d ##20 ENSGT00940000166104.b ENSGT00390000013846.a.a.d.b #22 ENSGT00940000158865.n ENSGT00390000017462.e ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00940000155897.qb.b ENSGT00390000009329.f ENSGT00390000000529.l ENSGT00940000159607.o ENSGT00950000183047.d.e.a #11 ENSGT00940000159211.C.nb.a.b ENSGT00940000156959.A.k.a ENSGT00390000014118.h ENSGT00390000017382.r.b ENSGT00390000006452.b.a.d ENSGT00390000008726.h.a.f ENSGT00940000160015.d Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00950000182825.B.g.b ENSGT00950000183012.A.a.c.a.d ENSGT00940000157488.h.f ENSGT00940000153745.a.b.d ENSGT00940000153372.B.l ENSGT00550000074946 ENSGT00940000158323.g.c ENSGT00940000166967.a ENSGT00390000010474.a ENSGT00940000164321.d.d ENSGT00940000156689.i ENSGT00940000155853.d.a.d ENSGT00390000017030.b.a.f ENSGT00940000155976.b.a.b.d ##20 ENSGT00940000166104.b ENSGT00390000013846.a.a.d.b #22 ENSGT00940000158865.n ENSGT00390000017462.e ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00940000155897.qb.b ENSGT00390000009329.f ENSGT00390000000529.l ENSGT00940000159607.o ENSGT00950000183047.d.e.a #11 ENSGT00940000159211.C.nb.a.b ENSGT00940000156959.A.k.a ENSGT00390000014118.h ENSGT00390000017382.r.b ENSGT00390000006452.b.a.d ENSGT00390000008726.h.a.f ENSGT00940000160015.d Oncorhynchus_a ANCESTRAL SPECIES 47 ENSGT00950000182825.B.g.b ENSGT00950000183012.A.a.c.a.d ENSGT00940000157488.h.f ENSGT00940000153745.a.b.d ENSGT00940000153372.B.l ENSGT00550000074946 ENSGT00940000158323.g.c ENSGT00940000166967.a ENSGT00390000010474.a ENSGT00940000164321.d.d ENSGT00940000156689.i ENSGT00940000155853.d.a.d ENSGT00390000017030.b.a.f ENSGT00940000155976.b.a.b.d ##20 ENSGT00940000166104.b ENSGT00390000013846.a.a.d.b #22 ENSGT00940000158865.n ENSGT00390000017462.e ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00940000155897.qb.b ENSGT00390000009329.f ENSGT00390000000529.l ENSGT00940000159607.o ENSGT00950000183047.d.e.a #11 ENSGT00940000159211.C.nb.a.b ENSGT00940000156959.A.k.a ENSGT00390000014118.h ENSGT00390000017382.r.b ENSGT00390000006452.b.a.d ENSGT00390000008726.h.a.f ENSGT00940000160015.d Coho salmon MODERN SPECIES 21 vps37bb (ENSOKIG00005045544) SLC4A5 (ENSOKIG00005045664) tacr1b (ENSOKIG00005047200) scarb1 (ENSOKIG00005047255) ddx56 (ENSOKIG00005047384) aebp1a (ENSOKIG00005047401) pnx (ENSOKIG00005047426) ash2l (ENSOKIG00005047494) grk5 (ENSOKIG00005047986) ENSOKIG00005048321 ttll11 (ENSOKIG00005048326) dab2ipb (ENSOKIG00005048344) zgc:63972 (ENSOKIG00005048506) fibcd1b (ENSOKIG00005048512) ##20 ENSOKIG00005048528 aif1l (ENSOKIG00005048576) #22 prkaa1 (ENSOKIG00005048593) ttc33 (ENSOKIG00005048647) ptger4b (ENSOKIG00005048651) ENSOKIG00005048656 MAP1B (ENSOKIG00005048659) ptcd2 (ENSOKIG00005048675) CACFD1 (ENSOKIG00005048688) REXO4 (ENSOKIG00005048696) FNBP1 (ENSOKIG00005048725) #11 ENSOKIG00005048841 ENSOKIG00005048951 ENSOKIG00005048963 ppp1r26 (ENSOKIG00005048967) mrps2 (ENSOKIG00005048968) dipk1b (ENSOKIG00005048977) Chinook salmon MODERN SPECIES 26 tuba7l (ENSOTSG00005016681) ENSOTSG00005016684 ENSOTSG00005016685 TACR1 (ENSOTSG00005016686) scarb1 (ENSOTSG00005016699) ddx56 (ENSOTSG00005016708) aebp1a (ENSOTSG00005016710) ENSOTSG00005016879 ash2l (ENSOTSG00005016899) grk5 (ENSOTSG00005019273) ttll11 (ENSOTSG00005019489) dab2ipb (ENSOTSG00005019503) zgc:63972 (ENSOTSG00005021758) fibcd1b (ENSOTSG00005021759) ##20 ENSOTSG00005021761 aif1l (ENSOTSG00005021829) #22 prkaa1 (ENSOTSG00005021853) ttc33 (ENSOTSG00005021967) ptger4b (ENSOTSG00005021968) ENSOTSG00005021969 ptcd2 (ENSOTSG00005021970) CACFD1 (ENSOTSG00005021971) REXO4 (ENSOTSG00005021972) FNBP1 (ENSOTSG00005021974) #11 COL5A1 (ENSOTSG00005024614) ENSOTSG00005024626 ppp1r26 (ENSOTSG00005024627) mrps2 (ENSOTSG00005024628) dipk1b (ENSOTSG00005024632) agpat2 (ENSOTSG00005024635) egfl7 (ENSOTSG00005024636) Rainbow trout MODERN SPECIES 364 ENSOMYG00000055659 scarb1 (ENSOMYG00000044357) ENSOMYG00000044322 ENSOMYG00000044312 pnx (ENSOMYG00000044305) ENSOMYG00000044125 grk5 (ENSOMYG00000042685) ttll11 (ENSOMYG00000042529) ENSOMYG00000065106 ENSOMYG00000058358 dab2ipb (ENSOMYG00000064402) zgc:63972 (ENSOMYG00000042519) ENSOMYG00000049008 fibcd1b (ENSOMYG00000042512) ##20 ENSOMYG00000041810 aif1l (ENSOMYG00000077630) #22 ENSOMYG00000041390 ttc33 (ENSOMYG00000050921) ptger4b (ENSOMYG00000041358) ENSOMYG00000041351 ptcd2 (ENSOMYG00000041347) ENSOMYG00000041343 ENSOMYG00000041338 ENSOMYG00000062293 ENSOMYG00000041279 #11 ENSOMYG00000041271 ENSOMYG00000041268 ENSOMYG00000050453 ENSOMYG00000000586 ENSOMYG00000041262 mrps2 (ENSOMYG00000041260) Salmo ANCESTRAL SPECIES 1 ENSGT00950000182825.B.g.b ENSGT00950000183012.A.a.c.a.d ENSGT00940000157488.h.f ENSGT00940000153745.a.b.d ENSGT00940000153372.B.l ENSGT00550000074946 ENSGT00940000158323.g.c ENSGT00940000166967.a ENSGT00390000010474.a ENSGT00940000164321.d.d ENSGT00940000156689.i ENSGT00940000155853.d.a.d ENSGT00390000017030.b.a.f ENSGT00940000155976.b.a.b.d ##20 ENSGT00940000166104.b ENSGT00390000013846.a.a.d.b #22 ENSGT00940000158865.n ENSGT00390000017462.e ENSGT01050000244902.a.a.a.a.a.a.d ENSGT00940000155897.rb ENSGT00940000155897.qb.b ENSGT00390000009329.f ENSGT00390000000529.l ENSGT00940000159607.o ENSGT00950000183047.d.e.a #11 ENSGT00940000154535.D.wb ENSGT00940000159211.C.nb.a.b ENSGT00940000156959.A.k.a ENSGT00390000014118.h ENSGT00390000017382.r.b ENSGT00390000006452.b.a.d River trout MODERN SPECIES 3 tuba7l (ENSSTUG00000024528) tuba7l (ENSSTUG00000024498) vps37bb (ENSSTUG00000024486) SLC4A5 (ENSSTUG00000023622) tacr1b (ENSSTUG00000023545) scarb1 (ENSSTUG00000023406) ddx56 (ENSSTUG00000023356) aebp1a (ENSSTUG00000023010) pnx (ENSSTUG00000022969) ash2l (ENSSTUG00000022630) ttll11 (ENSSTUG00000022592) dab2ipb (ENSSTUG00000022370) zgc:63972 (ENSSTUG00000022341) fibcd1b (ENSSTUG00000022307) ##20 ENSSTUG00000022051 aif1l (ENSSTUG00000021949) #22 prkaa1 (ENSSTUG00000021804) ttc33 (ENSSTUG00000021767) ptger4b (ENSSTUG00000021762) ENSSTUG00000021757 MAP1B (ENSSTUG00000021748) ptcd2 (ENSSTUG00000021696) ENSSTUG00000021676 REXO4 (ENSSTUG00000021646) FNBP1 (ENSSTUG00000021425) #11 ENSSTUG00000021061 ENSSTUG00000021009 ppp1r26 (ENSSTUG00000020988) dipk1b (ENSSTUG00000020945) agpat2 (ENSSTUG00000020935) egfl7 (ENSSTUG00000020894) Huchen MODERN SPECIES 723 ENSHHUG00000006817 aif1l (ENSHHUG00000006856) #22 prkaa1 (ENSHHUG00000006887) ttc33 (ENSHHUG00000006939) ptger4b (ENSHHUG00000006945) MAP1B (ENSHHUG00000006988) Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 Cod MODERN SPECIES 17 olfm1b (ENSGMOG00000011102) ENSGMOG00000025560 ENSGMOG00000034539 mrps2 (ENSGMOG00000018790) dipk1b (ENSGMOG00000030249) ENSGMOG00000035676 ENSGMOG00000034161 ttll11 (ENSGMOG00000018810) dab2ipb (ENSGMOG00000018825) ENSGMOG00000025777 zgc:63972 (ENSGMOG00000014024) fibcd1b (ENSGMOG00000018250) ##20 ENSGMOG00000027986 ENSGMOG00000032265 ENSGMOG00000000460 aif1l (ENSGMOG00000030758) #22 ENSGMOG00000003508 ttc33 (ENSGMOG00000031606) ptger4b (ENSGMOG00000003555) ENSGMOG00000035280 ptcd2 (ENSGMOG00000003637) ENSGMOG00000003668 ENSGMOG00000000408 ENSGMOG00000018740 ENSGMOG00000013276 ENSGMOG00000013266 ENSGMOG00000013216 ENSGMOG00000008435 ENSGMOG00000008434 ENSGMOG00000008430 ENSGMOG00000032551 Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Ovalentaria ANCESTRAL SPECIES 16 ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00950000182888.a.a.a.f #7 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00950000182888.a.a.a.f #7 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Mangrove rivulus MODERN SPECIES 9 FGFR1 (ENSKMAG00000008646) stc1l (ENSKMAG00000008695) ENSKMAG00000008733 ENSKMAG00000008833 wdr45 (ENSKMAG00000008876) adra2b (ENSKMAG00000008927) ENSKMAG00000008934 zcchc9 (ENSKMAG00000008955) xrcc4 (ENSKMAG00000008977) vcanb (ENSKMAG00000009006) HAPLN1 (ENSKMAG00000009085) fbxw2 (ENSKMAG00000009106) zgc:63972 (ENSKMAG00000009133) fibcd1b (ENSKMAG00000009145) ##20 ENSKMAG00000009192 aif1l (ENSKMAG00000009221) #22 prkaa1 (ENSKMAG00000009245) ttc33 (ENSKMAG00000009290) ptger4b (ENSKMAG00000009302) MAP1B (ENSKMAG00000009314) ptcd2 (ENSKMAG00000009329) CACFD1 (ENSKMAG00000009353) ENSKMAG00000009385 garnl3 (ENSKMAG00000009465) ptges (ENSKMAG00000009677) usp20 (ENSKMAG00000009697) #10 RPL7A (ENSKMAG00000009779) ENSKMAG00000009859 surf1 (ENSKMAG00000009892) surf6 (ENSKMAG00000009936) kyat1 (ENSKMAG00000009948) Turquoise killifish MODERN SPECIES 1611 ENSNFUG00015017782 ENSNFUG00015016911 olfm1a (ENSNFUG00015016780) ENSNFUG00015016777 ENSNFUG00015016775 ENSNFUG00015016771 MRPS2 (ENSNFUG00015016767) dipk1b (ENSNFUG00015016713) TTLL11 (ENSNFUG00015016682) dab2ipb (ENSNFUG00015013236) zgc:63972 (ENSNFUG00015013141) CR847895.1 (ENSNFUG00015013137) ENSNFUG00015013135 FIBCD1 (ENSNFUG00015013129) ##20 LAMC3 (ENSNFUG00015012709) aif1l (ENSNFUG00015012643) #22 prkaa1 (ENSNFUG00015012276) TTC33 (ENSNFUG00015012257) PTGER4B (ENSNFUG00015012249) foxd1 (ENSNFUG00015012247) BTF3 (ENSNFUG00015012229) ankra2 (ENSNFUG00015012221) ACAP3 (ENSNFUG00015008239) SDF4 (ENSNFUG00015008093) FAM132A (ENSNFUG00015008086) OLFML3A (ENSNFUG00015008080) SYT6 (ENSNFUG00015008073) ENSNFUG00015008060 ENSNFUG00015008047 ENSNFUG00015008039 fbp1b (ENSNFUG00015008032) Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 NAME_4 ANCESTRAL SPECIES ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897.ub.b ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Mummichog MODERN SPECIES 2229 FNBP1 (ENSFHEG00000001800) #11 ENSFHEG00000001813 COL5A1 (ENSFHEG00000001880) olfm1a (ENSFHEG00000001901) mrps2 (ENSFHEG00000001911) ENSFHEG00000001924 dipk1b (ENSFHEG00000001935) dab2ipb (ENSFHEG00000001967) ttll11 (ENSFHEG00000001991) ENSFHEG00000001998 ENSFHEG00000002005 zgc:63972 (ENSFHEG00000000058) fibcd1b (ENSFHEG00000002015) ##20 ENSFHEG00000002020 ENSFHEG00000002028 aif1l (ENSFHEG00000002039) #22 prkaa1 (ENSFHEG00000002049) ttc33 (ENSFHEG00000002055) ptger4b (ENSFHEG00000002059) MAP1B (ENSFHEG00000002069) ptcd2 (ENSFHEG00000002084) CACFD1 (ENSFHEG00000002092) ENSFHEG00000002101 garnl3 (ENSFHEG00000002204) ptges (ENSFHEG00000002226) usp20 (ENSFHEG00000002232) #10 RPL7A (ENSFHEG00000002248) surf1 (ENSFHEG00000002274) surf6 (ENSFHEG00000002290) kyat1 (ENSFHEG00000002292) spout1 (ENSFHEG00000000075) Sheepshead minnow MODERN SPECIES 761 ENSCVAG00000006084 ENSCVAG00000006110 aif1l (ENSCVAG00000006137) #22 prkaa1 (ENSCVAG00000006151) ENSCVAG00000006154 Poeciliinae ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.f #7 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Poecilia ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.b ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 NAME_6 ANCESTRAL SPECIES 13 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000154427.A.d.b ENSGT00940000154427.A.d.a ENSGT01090000260030.a.b.a.b.a.c.b ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Sailfin molly MODERN SPECIES 469 ENSPLAG00000010610 ENSPLAG00000010599 aif1l (ENSPLAG00000010578) #22 prkaa1 (ENSPLAG00000010544) ttc33 (ENSPLAG00000010503) ptger4b (ENSPLAG00000010502) MAP1B (ENSPLAG00000010490) ptcd2 (ENSPLAG00000010456) Amazon molly MODERN SPECIES 280 agpat2 (ENSPFOG00000012638) FNBP1 (ENSPFOG00000012695) #11 COL5A1 (ENSPFOG00000012917) olfm1a (ENSPFOG00000014850) ENSPFOG00000014898 mrps2 (ENSPFOG00000014903) dipk1b (ENSPFOG00000014908) dab2ipb (ENSPFOG00000014953) ttll11 (ENSPFOG00000014960) ENSPFOG00000022341 ENSPFOG00000020254 ENSPFOG00000015002 ENSPFOG00000024019 fibcd1b (ENSPFOG00000015006) ##20 ENSPFOG00000015057 aif1l (ENSPFOG00000015289) #22 prkaa1 (ENSPFOG00000015293) ttc33 (ENSPFOG00000015356) ptger4b (ENSPFOG00000015378) MAP1B (ENSPFOG00000015389) CACFD1 (ENSPFOG00000015429) ptcd2 (ENSPFOG00000015434) ENSPFOG00000015442 garnl3 (ENSPFOG00000015525) ptges (ENSPFOG00000015754) usp20 (ENSPFOG00000015778) #10 RPL7A (ENSPFOG00000015861) surf1 (ENSPFOG00000015898) surf6 (ENSPFOG00000015946) kyat1 (ENSPFOG00000015963) spout1 (ENSPFOG00000016043) Guppy MODERN SPECIES 442 tor1 (ENSPREG00000021086) #7 egfl7 (ENSPREG00000021100) agpat2 (ENSPREG00000021142) FNBP1 (ENSPREG00000021213) #11 COL5A1 (ENSPREG00000021379) olfm1a (ENSPREG00000021493) ENSPREG00000021513 mrps2 (ENSPREG00000021519) dab2ipb (ENSPREG00000021572) ttll11 (ENSPREG00000021639) ENSPREG00000021648 ENSPREG00000021656 fibcd1b (ENSPREG00000021675) ##20 ENSPREG00000021690 ENSPREG00000021703 aif1l (ENSPREG00000021736) #22 prkaa1 (ENSPREG00000021748) ttc33 (ENSPREG00000021766) ptger4b (ENSPREG00000021779) MAP1B (ENSPREG00000021787) ptcd2 (ENSPREG00000021797) CACFD1 (ENSPREG00000021807) ENSPREG00000021821 garnl3 (ENSPREG00000021844) ptges (ENSPREG00000021881) usp20 (ENSPREG00000021897) #10 RPL7A (ENSPREG00000021928) ENSPREG00000021953 surf1 (ENSPREG00000021958) surf6 (ENSPREG00000021969) kyat1 (ENSPREG00000021980) Platyfish MODERN SPECIES 22 FNBP1 (ENSXMAG00000017879) #11 ENSXMAG00000023352 ENSXMAG00000027308 COL5A1 (ENSXMAG00000017898) olfm1a (ENSXMAG00000022464) ENSXMAG00000026107 ENSXMAG00000018131 mrps2 (ENSXMAG00000018132) dipk1b (ENSXMAG00000000349) dab2ipb (ENSXMAG00000018135) ttll11 (ENSXMAG00000018150) ENSXMAG00000018152 ENSXMAG00000023397 fibcd1b (ENSXMAG00000005973) ##20 ENSXMAG00000005965 aif1l (ENSXMAG00000021930) #22 prkaa1 (ENSXMAG00000016837) ttc33 (ENSXMAG00000025269) ptger4b (ENSXMAG00000026058) MAP1B (ENSXMAG00000005956) ptcd2 (ENSXMAG00000005940) CACFD1 (ENSXMAG00000005937) ENSXMAG00000028291 garnl3 (ENSXMAG00000005901) ptges (ENSXMAG00000005893) usp20 (ENSXMAG00000005842) #10 RPL7A (ENSXMAG00000021562) surf1 (ENSXMAG00000005824) surf6 (ENSXMAG00000024608) kyat1 (ENSXMAG00000005791) spout1 (ENSXMAG00000005778) Oryzias ANCESTRAL SPECIES 9 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e.l #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Oryzias_a ANCESTRAL SPECIES 12 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e.l #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 ENSGT00940000160114 Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000025318 COL5A1 (ENSORLG00000003591) olfm1a (ENSORLG00000025343) ENSORLG00000030208 mrps2 (ENSORLG00000003640) dipk1b (ENSORLG00000003651) ttll11 (ENSORLG00000003660) dab2ipb (ENSORLG00000003707) zgc:63972 (ENSORLG00000029795) ENSORLG00000027932 fibcd1b (ENSORLG00000003723) ##20 ENSORLG00000003739 RALB (ENSORLG00000025960) ENSORLG00000020437 ENSORLG00000025257 aif1l (ENSORLG00000003752) #22 prkaa1 (ENSORLG00000003787) ttc33 (ENSORLG00000028324) ptger4b (ENSORLG00000003829) MAP1B (ENSORLG00000003848) ptcd2 (ENSORLG00000003851) CACFD1 (ENSORLG00000030378) ENSORLG00000027629 garnl3 (ENSORLG00000003893) ptges (ENSORLG00000003915) usp20 (ENSORLG00000003940) #10 surf1 (ENSORLG00000003975) RPL7A (ENSORLG00000028414) ENSORLG00000027361 surf6 (ENSORLG00000003980) kyat1 (ENSORLG00000004002) Oryzias_b ANCESTRAL SPECIES 4 ENSGT00950000182888.a.a.a.e.l.a.a #7 ENSGT00950000182888.a.a.a.e.l.a.b #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Javanese ricefish MODERN SPECIES 3 tor1 (ENSOJAG00000012776) #7 tor1 (ENSOJAG00000012750) #7 egfl7 (ENSOJAG00000012729) agpat2 (ENSOJAG00000012718) FNBP1 (ENSOJAG00000012626) #11 COL5A1 (ENSOJAG00000012526) olfm1a (ENSOJAG00000012455) ENSOJAG00000012439 mrps2 (ENSOJAG00000012422) dipk1b (ENSOJAG00000012407) ttll11 (ENSOJAG00000012352) dab2ipb (ENSOJAG00000010728) zgc:63972 (ENSOJAG00000010443) fibcd1b (ENSOJAG00000010429) ##20 ENSOJAG00000010299 aif1l (ENSOJAG00000010253) #22 prkaa1 (ENSOJAG00000010059) ttc33 (ENSOJAG00000010033) ptger4b (ENSOJAG00000010018) MAP1B (ENSOJAG00000009994) ptcd2 (ENSOJAG00000009981) CACFD1 (ENSOJAG00000009958) ENSOJAG00000009943 garnl3 (ENSOJAG00000008353) ptges (ENSOJAG00000008202) usp20 (ENSOJAG00000007266) #10 RPL7A (ENSOJAG00000006972) surf1 (ENSOJAG00000006928) surf6 (ENSOJAG00000006920) kyat1 (ENSOJAG00000006113) spout1 (ENSOJAG00000005985) Indian medaka MODERN SPECIES 30 egfl7 (ENSOMEG00000013528) agpat2 (ENSOMEG00000013414) FNBP1 (ENSOMEG00000013391) #11 ENSOMEG00000013349 ENSOMEG00000013314 olfm1a (ENSOMEG00000013275) ENSOMEG00000013226 mrps2 (ENSOMEG00000013207) dipk1b (ENSOMEG00000013188) ttll11 (ENSOMEG00000013167) dab2ipb (ENSOMEG00000013086) zgc:63972 (ENSOMEG00000012851) fibcd1b (ENSOMEG00000012816) ##20 ENSOMEG00000012721 ENSOMEG00000012595 aif1l (ENSOMEG00000012569) #22 prkaa1 (ENSOMEG00000012523) ttc33 (ENSOMEG00000012491) ptger4b (ENSOMEG00000012457) MAP1B (ENSOMEG00000012440) ptcd2 (ENSOMEG00000012396) CACFD1 (ENSOMEG00000012370) ENSOMEG00000012338 garnl3 (ENSOMEG00000012232) ptges (ENSOMEG00000011986) usp20 (ENSOMEG00000000292) #10 RPL7A (ENSOMEG00000011848) surf1 (ENSOMEG00000011803) surf6 (ENSOMEG00000011772) kyat1 (ENSOMEG00000011754) spout1 (ENSOMEG00000011687) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Cichlidae ANCESTRAL SPECIES 10 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Nile tilapia MODERN SPECIES 19 tor1 (ENSONIG00000011193) #7 egfl7 (ENSONIG00000011197) ENSONIG00000035802 agpat2 (ENSONIG00000011201) FNBP1 (ENSONIG00000011203) #11 ENSONIG00000011209 olfm1a (ENSONIG00000011237) ENSONIG00000023677 mrps2 (ENSONIG00000011240) dipk1b (ENSONIG00000011241) ttll11 (ENSONIG00000011243) dab2ipb (ENSONIG00000011245) zgc:63972 (ENSONIG00000011250) fibcd1b (ENSONIG00000011251) ##20 ENSONIG00000011253 aif1l (ENSONIG00000011256) #22 prkaa1 (ENSONIG00000011261) ttc33 (ENSONIG00000011265) ptger4b (ENSONIG00000011266) MAP1B (ENSONIG00000011268) ptcd2 (ENSONIG00000011269) cacfd1 (ENSONIG00000027268) ENSONIG00000011272 garnl3 (ENSONIG00000011273) ptges (ENSONIG00000011278) usp20 (ENSONIG00000011281) #10 RPL7A (ENSONIG00000011286) ENSONIG00000028395 surf1 (ENSONIG00000011291) surf6 (ENSONIG00000011294) kyat1 (ENSONIG00000011295) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000179020 ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Haplochromini ANCESTRAL SPECIES ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000179020 ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Burton s mouthbrooder MODERN SPECIES 287 FNBP1 (ENSHBUG00000010835) #11 ENSHBUG00000010575 COL5A1 (ENSHBUG00000010535) ENSHBUG00000010242 olfm1a (ENSHBUG00000010226) mrps2 (ENSHBUG00000010171) dipk1b (ENSHBUG00000010155) ENSHBUG00000010142 ttll11 (ENSHBUG00000010134) dab2ipb (ENSHBUG00000010059) zgc:63972 (ENSHBUG00000009488) ENSHBUG00000009480 fibcd1b (ENSHBUG00000009468) ##20 ENSHBUG00000009437 ENSHBUG00000009294 aif1l (ENSHBUG00000009280) #22 prkaa1 (ENSHBUG00000009256) ttc33 (ENSHBUG00000009229) ptger4b (ENSHBUG00000009217) MAP1B (ENSHBUG00000009201) ptcd2 (ENSHBUG00000009191) CACFD1 (ENSHBUG00000009179) ENSHBUG00000009153 garnl3 (ENSHBUG00000009102) ptges (ENSHBUG00000008973) usp20 (ENSHBUG00000008947) #10 surf1 (ENSHBUG00000008808) RPL7A (ENSHBUG00000008785) surf6 (ENSHBUG00000008764) kyat1 (ENSHBUG00000008749) spout1 (ENSHBUG00000008743) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000179020 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 P. nyererei MODERN SPECIES 297 ENSPNYG00000002214 ENSPNYG00000002231 COL5A1 (ENSPNYG00000002267) olfm1a (ENSPNYG00000002567) ENSPNYG00000002612 mrps2 (ENSPNYG00000002624) dipk1b (ENSPNYG00000002632) ENSPNYG00000002651 ttll11 (ENSPNYG00000002662) dab2ipb (ENSPNYG00000002705) ENSPNYG00000002802 zgc:63972 (ENSPNYG00000002823) fibcd1b (ENSPNYG00000002860) ##20 ENSPNYG00000002887 ENSPNYG00000002937 aif1l (ENSPNYG00000003012) #22 prkaa1 (ENSPNYG00000003027) ttc33 (ENSPNYG00000003047) ptger4b (ENSPNYG00000003060) MAP1B (ENSPNYG00000003076) ptcd2 (ENSPNYG00000003122) CACFD1 (ENSPNYG00000003136) ENSPNYG00000003166 garnl3 (ENSPNYG00000003218) ptges (ENSPNYG00000003285) usp20 (ENSPNYG00000003304) #10 RPL7A (ENSPNYG00000003411) surf1 (ENSPNYG00000003395) surf6 (ENSPNYG00000003445) kyat1 (ENSPNYG00000003450) spout1 (ENSPNYG00000003463) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000179020 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Zebra mbuna MODERN SPECIES 1110 tor1 (ENSMZEG00005004445) #7 egfl7 (ENSMZEG00005004420) agpat2 (ENSMZEG00005004407) FNBP1 (ENSMZEG00005004314) #11 ENSMZEG00005004297 COL5A1 (ENSMZEG00005004152) olfm1a (ENSMZEG00005004110) mrps2 (ENSMZEG00005004066) dipk1b (ENSMZEG00005004041) ENSMZEG00005004032 ttll11 (ENSMZEG00005003989) dab2ipb (ENSMZEG00005003883) zgc:63972 (ENSMZEG00005003834) fibcd1b (ENSMZEG00005003810) ##20 ENSMZEG00005003730 aif1l (ENSMZEG00005003700) #22 prkaa1 (ENSMZEG00005003664) ttc33 (ENSMZEG00005003656) ptger4b (ENSMZEG00005003648) MAP1B (ENSMZEG00005003638) ptcd2 (ENSMZEG00005003625) CACFD1 (ENSMZEG00005003601) ENSMZEG00005003583 garnl3 (ENSMZEG00005003460) ptges (ENSMZEG00005003426) usp20 (ENSMZEG00005003281) #10 RPL7A (ENSMZEG00005003233) surf1 (ENSMZEG00005003202) surf6 (ENSMZEG00005003188) kyat1 (ENSMZEG00005003170) spout1 (ENSMZEG00005003159) Eastern happy MODERN SPECIES 19 COL5A1 (ENSACLG00000027546) olfm1a (ENSACLG00000027600) ENSACLG00000027602 ENSACLG00000027608 mrps2 (ENSACLG00000027610) dipk1b (ENSACLG00000027613) ENSACLG00000027616 ttll11 (ENSACLG00000027621) ENSACLG00000027627 dab2ipb (ENSACLG00000027638) zgc:63972 (ENSACLG00000027676) fibcd1b (ENSACLG00000027683) ##20 ENSACLG00000027693 ENSACLG00000027721 ENSACLG00000027730 aif1l (ENSACLG00000027732) #22 prkaa1 (ENSACLG00000027734) ttc33 (ENSACLG00000027735) ptger4b (ENSACLG00000027737) MAP1B (ENSACLG00000027739) ENSACLG00000027741 ptcd2 (ENSACLG00000027742) CACFD1 (ENSACLG00000027744) ENSACLG00000027747 ENSACLG00000027752 garnl3 (ENSACLG00000027760) ptges (ENSACLG00000027791) usp20 (ENSACLG00000027797) #10 surf1 (ENSACLG00000027811) RPL7A (ENSACLG00000027812) surf6 (ENSACLG00000027819) Lyretail cichlid MODERN SPECIES 336 egfl7 (ENSNBRG00000009119) agpat2 (ENSNBRG00000009109) FNBP1 (ENSNBRG00000009051) #11 ENSNBRG00000009001 COL5A1 (ENSNBRG00000008750) olfm1a (ENSNBRG00000008693) mrps2 (ENSNBRG00000008658) dipk1b (ENSNBRG00000008628) ENSNBRG00000008612 ENSNBRG00000008604 dab2ipb (ENSNBRG00000008531) zgc:63972 (ENSNBRG00000008471) ENSNBRG00000008437 fibcd1b (ENSNBRG00000008413) ##20 ENSNBRG00000008330 aif1l (ENSNBRG00000008295) #22 prkaa1 (ENSNBRG00000008265) ttc33 (ENSNBRG00000008253) ptger4b (ENSNBRG00000008241) MAP1B (ENSNBRG00000008192) ptcd2 (ENSNBRG00000008174) CACFD1 (ENSNBRG00000008151) ENSNBRG00000008126 garnl3 (ENSNBRG00000008022) ptges (ENSNBRG00000007999) usp20 (ENSNBRG00000007932) #10 RPL7A (ENSNBRG00000007869) surf1 (ENSNBRG00000007828) surf6 (ENSNBRG00000007805) kyat1 (ENSNBRG00000007769) spout1 (ENSNBRG00000007733) Midas cichlid MODERN SPECIES 1127 tor1 (ENSACIG00000003085) #7 egfl7 (ENSACIG00000003055) agpat2 (ENSACIG00000003013) FNBP1 (ENSACIG00000002989) #11 ENSACIG00000002974 ENSACIG00000002727 olfm1a (ENSACIG00000002699) ENSACIG00000002695 mrps2 (ENSACIG00000002684) dipk1b (ENSACIG00000002672) ttll11 (ENSACIG00000002644) dab2ipb (ENSACIG00000002603) zgc:63972 (ENSACIG00000002585) fibcd1b (ENSACIG00000002563) ##20 ENSACIG00000002493 aif1l (ENSACIG00000002395) #22 prkaa1 (ENSACIG00000002358) ttc33 (ENSACIG00000002341) ptger4b (ENSACIG00000002112) MAP1B (ENSACIG00000002074) ptcd2 (ENSACIG00000002053) CACFD1 (ENSACIG00000002027) ENSACIG00000002004 garnl3 (ENSACIG00000001937) ptges (ENSACIG00000001917) usp20 (ENSACIG00000001853) #10 RPL7A (ENSACIG00000001793) ENSACIG00000001780 surf1 (ENSACIG00000001760) ENSACIG00000001752 kyat1 (ENSACIG00000001684) Pomacentridae ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897.tb.b ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897.tb.b ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00990000204427 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Amphiprion ANCESTRAL SPECIES 5 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897.tb.b ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00990000204427 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Clown anemonefish MODERN SPECIES 1446 fibcd1b (ENSAOCG00000006805) ##20 ENSAOCG00000006766 aif1l (ENSAOCG00000006703) #22 prkaa1 (ENSAOCG00000006671) ttc33 (ENSAOCG00000006636) ptger4b (ENSAOCG00000006629) MAP1B (ENSAOCG00000006623) ptcd2 (ENSAOCG00000006616) Orange clownfish MODERN SPECIES 7 tor1 (ENSAPEG00000000332) #7 egfl7 (ENSAPEG00000023724) agpat2 (ENSAPEG00000023715) FNBP1 (ENSAPEG00000023547) #11 ENSAPEG00000023518 COL5A1 (ENSAPEG00000023373) olfm1a (ENSAPEG00000023333) mrps2 (ENSAPEG00000023312) dipk1b (ENSAPEG00000023298) ttll11 (ENSAPEG00000023272) dab2ipb (ENSAPEG00000023179) ENSAPEG00000023140 zgc:63972 (ENSAPEG00000023131) fibcd1b (ENSAPEG00000023089) ##20 ENSAPEG00000023029 aif1l (ENSAPEG00000023004) #22 prkaa1 (ENSAPEG00000022978) ttc33 (ENSAPEG00000022974) ptger4b (ENSAPEG00000022966) MAP1B (ENSAPEG00000022946) ptcd2 (ENSAPEG00000022926) ENSAPEG00000022907 CACFD1 (ENSAPEG00000022896) ENSAPEG00000022838 garnl3 (ENSAPEG00000022736) ptges (ENSAPEG00000022713) usp20 (ENSAPEG00000022559) #10 ENSAPEG00000022502 RPL7A (ENSAPEG00000022489) surf1 (ENSAPEG00000022454) surf6 (ENSAPEG00000022442) Spiny chromis MODERN SPECIES 321 aif1l (ENSAPOG00000008094) #22 prkaa1 (ENSAPOG00000008061) ttc33 (ENSAPOG00000008010) suclg2 (ENSAPOG00000007999) TAFA1 (ENSAPOG00000007941) tafa4b (ENSAPOG00000007889) EOGT (ENSAPOG00000007838) tmf1 (ENSAPOG00000007733) uba3 (ENSAPOG00000007634) ENSAPOG00000007542 Bicolor damselfish MODERN SPECIES 1061 ENSSPAG00000020545 aif1l (ENSSPAG00000020533) #22 prkaa1 (ENSSPAG00000020500) ttc33 (ENSSPAG00000020482) ptger4b (ENSSPAG00000020479) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Carangaria ANCESTRAL SPECIES 17 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Carangaria_A ANCESTRAL SPECIES 18 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Seriola ANCESTRAL SPECIES 116 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00940000181622 ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000159362 ENSGT00940000164999 ENSGT00390000000529 ENSGT00390000009329 ENSGT00940000155897 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Greater amberjack MODERN SPECIES 198 dipk1b (ENSSDUG00000008660) ttll11 (ENSSDUG00000008633) dab2ipb (ENSSDUG00000008501) zgc:63972 (ENSSDUG00000008472) fibcd1b (ENSSDUG00000008458) ##20 ENSSDUG00000008443 ENSSDUG00000008430 aif1l (ENSSDUG00000008412) #22 prkaa1 (ENSSDUG00000008366) ttc33 (ENSSDUG00000008348) ptger4b (ENSSDUG00000008343) garnl3 (ENSSDUG00000008200) ENSSDUG00000008174 CACFD1 (ENSSDUG00000008156) ptcd2 (ENSSDUG00000008142) MAP1B (ENSSDUG00000008118) ptges (ENSSDUG00000008111) usp20 (ENSSDUG00000008028) #10 RPL7A (ENSSDUG00000007967) surf1 (ENSSDUG00000007956) surf6 (ENSSDUG00000007947) kyat1 (ENSSDUG00000007909) spout1 (ENSSDUG00000007894) Yellowtail amberjack MODERN SPECIES 3057 uck1 (ENSSLDG00000015905) #28 rapgef1b (ENSSLDG00000015803) #30 NTNG2 (ENSSLDG00000015748) #32 dolpp1 (ENSSLDG00000015720) dipk1b (ENSSLDG00000015701) ttll11 (ENSSLDG00000015666) dab2ipb (ENSSLDG00000015561) ENSSLDG00000015524 zgc:63972 (ENSSLDG00000015506) fibcd1b (ENSSLDG00000015466) ##20 ENSSLDG00000015449 ENSSLDG00000015443 aif1l (ENSSLDG00000015437) #22 prkaa1 (ENSSLDG00000015409) ttc33 (ENSSLDG00000015394) ptger4b (ENSSLDG00000015381) garnl3 (ENSSLDG00000015345) ENSSLDG00000015316 CACFD1 (ENSSLDG00000015304) ptcd2 (ENSSLDG00000015284) MAP1B (ENSSLDG00000015260) ptges (ENSSLDG00000015242) usp20 (ENSSLDG00000015169) #10 RPL7A (ENSSLDG00000015058) surf1 (ENSSLDG00000015036) surf6 (ENSSLDG00000015027) kyat1 (ENSSLDG00000014977) spout1 (ENSSLDG00000014944) Barramundi perch MODERN SPECIES 101 zgc:63972 (ENSLCAG00010000842) fibcd1b (ENSLCAG00010000850) ##20 ENSLCAG00010000873 aif1l (ENSLCAG00010000893) #22 prkaa1 (ENSLCAG00010000899) ttc33 (ENSLCAG00010000909) ptger4b (ENSLCAG00010000912) MAP1B (ENSLCAG00010000915) ENSLCAG00010000921 ENSLCAG00010000925 CACFD1 (ENSLCAG00010000927) ENSLCAG00010000933 garnl3 (ENSLCAG00010000947) ptges (ENSLCAG00010000971) RPL7A (ENSLCAG00010000978) usp20 (ENSLCAG00010001033) #10 ENSLCAG00010001472 surf1 (ENSLCAG00010001477) surf6 (ENSLCAG00010001484) Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00940000154962.A.a.b ENSGT00390000006867 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a.b ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104.d ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00990000204427 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Turbot MODERN SPECIES 7 ENSSMAG00000011324 ENSSMAG00000011309 ENSSMAG00000011301 ENSSMAG00000011131 #11 ENSSMAG00000010961 ENSSMAG00000010923 ENSSMAG00000031192 ENSSMAG00000010890 ENSSMAG00000010885 ENSSMAG00000010875 ttll11 (ENSSMAG00000010852) dab2ipb (ENSSMAG00000010683) zgc:63972 (ENSSMAG00000010637) fibcd1b (ENSSMAG00000010616) ##20 ENSSMAG00000010464 aif1l (ENSSMAG00000010438) #22 ENSSMAG00000010411 ttc33 (ENSSMAG00000010404) ptger4b (ENSSMAG00000010391) ENSSMAG00000010368 ptcd2 (ENSSMAG00000010350) ENSSMAG00000026577 ENSSMAG00000010324 garnl3 (ENSSMAG00000010116) ptges (ENSSMAG00000010076) usp20 (ENSSMAG00000009967) #10 ENSSMAG00000009921 ENSSMAG00000009881 surf1 (ENSSMAG00000009854) ENSSMAG00000025410 kyat1 (ENSSMAG00000009812) Tongue sole MODERN SPECIES 5 tia1 (ENSCSEG00000014331) DTWD2 (ENSCSEG00000014347) egfl7 (ENSCSEG00000014350) agpat2 (ENSCSEG00000014366) FNBP1 (ENSCSEG00000014406) #11 COL5A1 (ENSCSEG00000014675) olfm1a (ENSCSEG00000014765) ENSCSEG00000014781 ENSCSEG00000014785 mrps2 (ENSCSEG00000014820) dipk1b (ENSCSEG00000014831) ttll11 (ENSCSEG00000014835) dab2ipb (ENSCSEG00000014846) ENSCSEG00000014862 ENSCSEG00000014869 aif1l (ENSCSEG00000014871) #22 prkaa1 (ENSCSEG00000014887) ttc33 (ENSCSEG00000014913) ptger4b (ENSCSEG00000014929) MAP1B (ENSCSEG00000014931) ptcd2 (ENSCSEG00000014936) CACFD1 (ENSCSEG00000014943) ENSCSEG00000014955 garnl3 (ENSCSEG00000015001) ptges (ENSCSEG00000015105) usp20 (ENSCSEG00000015113) #10 RPL7A (ENSCSEG00000015141) surf1 (ENSCSEG00000015166) surf6 (ENSCSEG00000015172) kyat1 (ENSCSEG00000015176) spout1 (ENSCSEG00000015216) Anabantaria ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.e #7 ENSGT00950000182888.a.a.a.f #7 ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e #11 ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Zig-zag eel MODERN SPECIES 3 ENSMAMG00000000375 #7 ENSMAMG00000019247 #7 mrps2 (ENSMAMG00000019225) ENSMAMG00000019221 ENSMAMG00000019202 ENSMAMG00000019021 ENSMAMG00000018845 #11 ENSMAMG00000018821 ENSMAMG00000024326 ENSMAMG00000018780 ttll11 (ENSMAMG00000018750) dab2ipb (ENSMAMG00000018682) ENSMAMG00000027358 fibcd1b (ENSMAMG00000018653) ##20 ENSMAMG00000018613 aif1l (ENSMAMG00000018586) #22 ENSMAMG00000018561 ttc33 (ENSMAMG00000018553) ptger4b (ENSMAMG00000018540) ENSMAMG00000018535 CACFD1 (ENSMAMG00000018529) ENSMAMG00000018496 garnl3 (ENSMAMG00000018447) ptges (ENSMAMG00000018416) usp20 (ENSMAMG00000018349) #10 ENSMAMG00000018289 surf1 (ENSMAMG00000025994) ENSMAMG00000018269 kyat1 (ENSMAMG00000018263) spout1 (ENSMAMG00000018243) ENSMAMG00000018235 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00950000182888.a.a.a.e #7 ENSGT00950000182888.a.a.a.f #7 ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e #11 ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Siamese fighting fish MODERN SPECIES 3 ENSBSLG00000014168 #7 ENSBSLG00000014155 ENSBSLG00000014139 olfm1a (ENSBSLG00000014064) COL5A1 (ENSBSLG00000013355) FNBP1 (ENSBSLG00000011784) #11 agpat2 (ENSBSLG00000011659) egfl7 (ENSBSLG00000011602) mrps2 (ENSBSLG00000011439) dipk1b (ENSBSLG00000011434) ttll11 (ENSBSLG00000011421) dab2ipb (ENSBSLG00000009861) zgc:63972 (ENSBSLG00000009549) fibcd1b (ENSBSLG00000009532) ##20 ENSBSLG00000008814 aif1l (ENSBSLG00000008785) #22 prkaa1 (ENSBSLG00000008485) ttc33 (ENSBSLG00000008456) ptger4b (ENSBSLG00000008452) MAP1B (ENSBSLG00000008416) ptcd2 (ENSBSLG00000008375) CACFD1 (ENSBSLG00000008358) ENSBSLG00000008340 ENSBSLG00000008329 garnl3 (ENSBSLG00000007878) ptges (ENSBSLG00000007559) usp20 (ENSBSLG00000007200) #10 RPL7A (ENSBSLG00000007126) surf1 (ENSBSLG00000007100) surf6 (ENSBSLG00000007095) kyat1 (ENSBSLG00000006898) Climbing perch MODERN SPECIES 3 ENSATEG00000010990 #7 ENSATEG00000011025 #7 ENSATEG00000026414 ENSATEG00000011044 ENSATEG00000011084 ENSATEG00000011496 #11 ENSATEG00000011634 ENSATEG00000011642 mrps2 (ENSATEG00000029578) ENSATEG00000011669 ttll11 (ENSATEG00000011693) dab2ipb (ENSATEG00000011718) zgc:63972 (ENSATEG00000028263) fibcd1b (ENSATEG00000029755) ##20 ENSATEG00000011971 aif1l (ENSATEG00000012088) #22 ENSATEG00000012171 ttc33 (ENSATEG00000012148) ENSATEG00000012156 ptger4b (ENSATEG00000012202) ENSATEG00000012225 ptcd2 (ENSATEG00000012266) ENSATEG00000012311 ENSATEG00000012324 garnl3 (ENSATEG00000012372) ptges (ENSATEG00000012444) usp20 (ENSATEG00000012458) #10 RPL7A (ENSATEG00000029437) ENSATEG00000012619 surf1 (ENSATEG00000012573) ENSATEG00000012640 Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000177534 ENSGT00940000154535.D.wb ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Tetraodontidae ANCESTRAL SPECIES 19 ENSGT00550000074890.f ENSGT00390000008107.c.a ENSGT00950000182983.B.a.b.e ENSGT00940000155831.cb ENSGT00940000157156 ENSGT00940000153288.b ENSGT00940000157140.b.a.b.b ENSGT00940000157105 ENSGT00940000155389 ENSGT01050000244898.b.b ENSGT00940000157321 ENSGT00940000156290.b ENSGT01070000253744.b.b.f ENSGT00940000154821.a.a ENSGT00940000154886.a.b ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Tetraodon MODERN SPECIES 19 nsa2 (ENSTNIG00000013439) gfm2 (ENSTNIG00000013438) hexb (ENSTNIG00000013437) ENSTNIG00000013436 ankra2 (ENSTNIG00000013435) btf3 (ENSTNIG00000013434) foxd1 (ENSTNIG00000013433) fcho2 (ENSTNIG00000006689) TNPO1 (ENSTNIG00000007483) mob1bb (ENSTNIG00000007484) dck (ENSTNIG00000007485) SLC4A4 (ENSTNIG00000007486) NPFFR2 (ENSTNIG00000007487) ENSTNIG00000007488 ENSTNIG00000007489 aif1l (ENSTNIG00000007490) #22 prkaa1 (ENSTNIG00000007491) ttc33 (ENSTNIG00000007492) ptger4b (ENSTNIG00000007493) MAP1B (ENSTNIG00000007494) ptcd2 (ENSTNIG00000007495) CACFD1 (ENSTNIG00000007496) ENSTNIG00000007497 garnl3 (ENSTNIG00000007498) ptges (ENSTNIG00000007499) usp20 (ENSTNIG00000007500) #10 rpl7a (ENSTNIG00000007501) surf1 (ENSTNIG00000007502) kyat1 (ENSTNIG00000007504) surf6 (ENSTNIG00000007503) spout1 (ENSTNIG00000007505) Fugu MODERN SPECIES 18 tor1 (ENSTRUG00000024523) #7 nsa2 (ENSTRUG00000025113) hexb (ENSTRUG00000018510) ENC1 (ENSTRUG00000018509) ARHGEF28 (ENSTRUG00000018508) ankra2 (ENSTRUG00000018506) btf3 (ENSTRUG00000023038) foxd1 (ENSTRUG00000018503) fcho2 (ENSTRUG00000018494) mob1bb (ENSTRUG00000018489) dck (ENSTRUG00000031783) SLC4A4 (ENSTRUG00000018460) npffr-2 (ENSTRUG00000018455) ENSTRUG00000028567 ENSTRUG00000032548 aif1l (ENSTRUG00000020405) #22 prkaa1 (ENSTRUG00000018441) ttc33 (ENSTRUG00000018440) ptger4b (ENSTRUG00000028946) MAP1B (ENSTRUG00000018435) ptcd2 (ENSTRUG00000018429) cacfd1 (ENSTRUG00000033138) ENSTRUG00000018423 garnl3 (ENSTRUG00000018417) ptges (ENSTRUG00000020670) usp20 (ENSTRUG00000018404) #10 RPL7A (ENSTRUG00000018399) surf1 (ENSTRUG00000025293) surf6 (ENSTRUG00000023872) kyat1 (ENSTRUG00000018388) spout1 (ENSTRUG00000024910) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00950000182888.a.a.a.e #7 ENSGT00950000182888.a.a.a.f #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Ballan wrasse MODERN SPECIES 70 ENSLBEG00000025582 COL5A1 (ENSLBEG00000025409) olfm1a (ENSLBEG00000025260) mrps2 (ENSLBEG00000025218) dipk1b (ENSLBEG00000025204) ttll11 (ENSLBEG00000025171) dab2ipb (ENSLBEG00000025134) zgc:63972 (ENSLBEG00000025087) fibcd1b (ENSLBEG00000025021) ##20 ENSLBEG00000024996 ENSLBEG00000024984 aif1l (ENSLBEG00000024968) #22 prkaa1 (ENSLBEG00000024938) ttc33 (ENSLBEG00000024922) ptger4b (ENSLBEG00000024912) MAP1B (ENSLBEG00000024896) ptcd2 (ENSLBEG00000024871) CACFD1 (ENSLBEG00000024855) ENSLBEG00000024840 garnl3 (ENSLBEG00000024716) ptges (ENSLBEG00000024640) ENSLBEG00000024621 usp20 (ENSLBEG00000024527) #10 rpl7a (ENSLBEG00000024398) surf1 (ENSLBEG00000024327) surf6 (ENSLBEG00000024311) kyat1 (ENSLBEG00000024280) Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00950000182888.a.a.a.f #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000177534 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT01060000248756 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 European seabass MODERN SPECIES 9 ENSDLAG00005027893 ENSDLAG00005028638 #7 ENSDLAG00005032168 ENSDLAG00005019465 #11 ENSDLAG00005020848 ENSDLAG00005020853 ENSDLAG00005026497 ENSDLAG00005026339 ENSDLAG00005020886 ENSDLAG00005020889 ttll11 (ENSDLAG00005020892) dab2ipb (ENSDLAG00005020932) zgc:63972 (ENSDLAG00005022299) fibcd1b (ENSDLAG00005027095) ##20 ENSDLAG00005022319 aif1l (ENSDLAG00005033318) #22 ENSDLAG00005022332 ttc33 (ENSDLAG00005022383) ptger4b (ENSDLAG00005028637) ENSDLAG00005022393 ptcd2 (ENSDLAG00005029467) ENSDLAG00005022405 garnl3 (ENSDLAG00005022433) ptges (ENSDLAG00005033508) usp20 (ENSDLAG00005022729) #10 ENSDLAG00005023312 ENSDLAG00005023314 ENSDLAG00005023321 ENSDLAG00005023329 NUP188 (ENSDLAG00005023401) dolk (ENSDLAG00005028297) Large yellow croaker MODERN SPECIES 4 tor1 (ENSLCRG00005005786) #7 egfl7 (ENSLCRG00005005783) agpat2 (ENSLCRG00005005782) FNBP1 (ENSLCRG00005005019) #11 ENSLCRG00005005002 COL5A1 (ENSLCRG00005004998) olfm1a (ENSLCRG00005004992) ENSLCRG00005004991 mrps2 (ENSLCRG00005004990) dipk1b (ENSLCRG00005004988) ttll11 (ENSLCRG00005004985) dab2ipb (ENSLCRG00005004818) zgc:63972 (ENSLCRG00005004807) fibcd1b (ENSLCRG00005004803) ##20 ENSLCRG00005004791 aif1l (ENSLCRG00005004774) #22 psmb10 (ENSLCRG00005004767) selenoh (ENSLCRG00005004764) prkaa1 (ENSLCRG00005004622) ttc33 (ENSLCRG00005004619) ptger4b (ENSLCRG00005004617) MAP1B (ENSLCRG00005004616) ptcd2 (ENSLCRG00005004614) ENSLCRG00005004613 CACFD1 (ENSLCRG00005004611) ENSLCRG00005004609 garnl3 (ENSLCRG00005003305) ptges (ENSLCRG00005003277) usp20 (ENSLCRG00005003028) #10 surf1 (ENSLCRG00005003004) RPL7A (ENSLCRG00005002789) Gilthead seabream MODERN SPECIES 3 agpat2 (ENSSAUG00010015362) FNBP1 (ENSSAUG00010015419) #11 ENSSAUG00010019621 COL5A1 (ENSSAUG00010019625) olfm1a (ENSSAUG00010019643) ENSSAUG00010019646 mrps2 (ENSSAUG00010019649) ENSSAUG00010019652 dipk1b (ENSSAUG00010019656) ttll11 (ENSSAUG00010019657) dab2ipb (ENSSAUG00010019679) zgc:63972 (ENSSAUG00010019734) fibcd1b (ENSSAUG00010019738) ##20 ENSSAUG00010019742 ENSSAUG00010019751 aif1l (ENSSAUG00010019768) #22 rad1 (ENSSAUG00010019773) bxdc2 (ENSSAUG00010019786) dnajc21 (ENSSAUG00010019794) xrcc4 (ENSSAUG00010019797) vcanb (ENSSAUG00010019798) HAPLN1 (ENSSAUG00010019799) ENSSAUG00010019802 ENSSAUG00010019803 ENSSAUG00010019805 ENSSAUG00010019806 ENSSAUG00010019807 ENSSAUG00010019808 ENSSAUG00010019810 ENSSAUG00010019812 CETN1 (ENSSAUG00010019815) Perciformes ANCESTRAL SPECIES 16 ENSGT00950000182888.a.a.a.e #7 ENSGT00950000182888.a.a.a.f #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 Cottioidei ANCESTRAL SPECIES 18 ENSGT00390000018706 ENSGT00950000182888.a.a.a.e #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00990000204427 ENSGT00530000064194 ENSGT01030000237506 ENSGT00390000006980 Stickleback MODERN SPECIES 13 nsa2 (ENSGACG00000015892) tor1 (ENSGACG00000015894) #7 egfl7 (ENSGACG00000015896) agpat2 (ENSGACG00000015898) ENSGACG00000015900 FNBP1 (ENSGACG00000015902) #11 COL5A1 (ENSGACG00000015903) olfm1a (ENSGACG00000015907) mrps2 (ENSGACG00000015913) dipk1b (ENSGACG00000015914) ttll11 (ENSGACG00000015915) dab2ipb (ENSGACG00000015916) zgc:63972 (ENSGACG00000015917) fibcd1b (ENSGACG00000015918) ##20 ENSGACG00000015920 aif1l (ENSGACG00000015924) #22 prkaa1 (ENSGACG00000015926) ttc33 (ENSGACG00000015928) ptger4b (ENSGACG00000015930) MAP1B (ENSGACG00000015932) ptcd2 (ENSGACG00000015934) CACFD1 (ENSGACG00000015938) ENSGACG00000015941 garnl3 (ENSGACG00000015942) ptges (ENSGACG00000015945) usp20 (ENSGACG00000015949) #10 RPL7A (ENSGACG00000015957) surf1 (ENSGACG00000015983) ENSGACG00000015989 kyat1 (ENSGACG00000015991) ST6GALNAC6 (ENSGACG00000016008) Lumpfish MODERN SPECIES 3 ENSCLMG00005013852 ENSCLMG00005001851 olfm1a (ENSCLMG00005001351) olfm1a (ENSCLMG00005001332) ENSCLMG00005001315 ENSCLMG00005016497 mrps2 (ENSCLMG00005016496) dipk1b (ENSCLMG00005016495) ttll11 (ENSCLMG00005016493) dab2ipb (ENSCLMG00005012038) zgc:63972 (ENSCLMG00005012001) fibcd1b (ENSCLMG00005011669) ##20 ENSCLMG00005011667 ENSCLMG00005011666 ENSCLMG00005011665 aif1l (ENSCLMG00005011663) #22 zgc:171695 (ENSCLMG00005011662) capslb (ENSCLMG00005011661) ENSCLMG00005011660 myo5b (ENSCLMG00005010955) ENSCLMG00005010944 ENSCLMG00005010943 lmbrd2b (ENSCLMG00005010878) MFHAS1 (ENSCLMG00005010874) rpl17 (ENSCLMG00005010868) nkx6.1 (ENSCLMG00005010867) ENSCLMG00005010866 ENSCLMG00005010865 mrps18c (ENSCLMG00005010864) HELQ (ENSCLMG00005010853) hpse (ENSCLMG00005010845) Perciformes_a ANCESTRAL SPECIES 12 ENSGT00950000182888.a.a.a.e #7 ENSGT00950000182888.a.a.a.f #7 ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00950000183047.d.e #11 ENSGT00940000159211.C ENSGT00940000156959.A ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00940000158865 ENSGT00390000017462 ENSGT01050000244902.a.a.a.a.a.a ENSGT00940000155897 ENSGT00390000009329 ENSGT00390000000529 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 #10 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00390000016537 Pike perch MODERN SPECIES 33 tor1 (ENSSLUG00000023572) #7 egfl7 (ENSSLUG00000023566) agpat2 (ENSSLUG00000023560) FNBP1 (ENSSLUG00000022956) #11 ENSSLUG00000022886 COL5A1 (ENSSLUG00000022876) olfm1a (ENSSLUG00000022831) ENSSLUG00000022816 mrps2 (ENSSLUG00000022813) dipk1b (ENSSLUG00000022807) ttll11 (ENSSLUG00000022799) dab2ipb (ENSSLUG00000021582) zgc:63972 (ENSSLUG00000021502) fibcd1b (ENSSLUG00000021495) ##20 ENSSLUG00000021472 aif1l (ENSSLUG00000021461) #22 prkaa1 (ENSSLUG00000021451) ttc33 (ENSSLUG00000021446) ptger4b (ENSSLUG00000021443) MAP1B (ENSSLUG00000021439) ptcd2 (ENSSLUG00000021435) CACFD1 (ENSSLUG00000021432) ENSSLUG00000021423 garnl3 (ENSSLUG00000021236) ptges (ENSSLUG00000021210) usp20 (ENSSLUG00000017439) #10 RPL7A (ENSSLUG00000017153) surf1 (ENSSLUG00000017139) surf6 (ENSSLUG00000017133) kyat1 (ENSSLUG00000017126) ENSSLUG00000017120 Channel bull blenny MODERN SPECIES 3 COL5A1 (ENSCGOG00000008390) olfm1a (ENSCGOG00000008397) ENSCGOG00000008410 mrps2 (ENSCGOG00000008415) ENSCGOG00000008422 ENSCGOG00000008425 dipk1b (ENSCGOG00000008428) ttll11 (ENSCGOG00000008434) dab2ipb (ENSCGOG00000008443) ENSCGOG00000008465 zgc:63972 (ENSCGOG00000008471) fibcd1b (ENSCGOG00000008476) ##20 ENSCGOG00000008485 ENSCGOG00000008487 ENSCGOG00000008514 aif1l (ENSCGOG00000009244) #22 prkaa1 (ENSCGOG00000009252) prkaa1 (ENSCGOG00000009255) ttc33 (ENSCGOG00000009309) ptger4b (ENSCGOG00000009318) MAP1B (ENSCGOG00000009659) ENSCGOG00000009664 ENSCGOG00000009691 ENSCGOG00000009710 ENSCGOG00000009720 RPL7A (ENSCGOG00000009742) usp20 (ENSCGOG00000010031) #10 ptges (ENSCGOG00000010476) garnl3 (ENSCGOG00000010490) ENSCGOG00000011169 CACFD1 (ENSCGOG00000011176) Tiger tail seahorse MODERN SPECIES 209 olfm1a (ENSHCOG00000006018) dipk1b (ENSHCOG00000005998) mrps2 (ENSHCOG00000005980) ENSHCOG00000005970 ENSHCOG00000005963 ENSHCOG00000005950 dab2ipb (ENSHCOG00000005925) fibcd1b (ENSHCOG00000005803) ##20 ENSHCOG00000005784 ENSHCOG00000005777 aif1l (ENSHCOG00000005764) #22 prkaa1 (ENSHCOG00000005754) scamp1 (ENSHCOG00000005740) lhfpl2a (ENSHCOG00000005734) ARSB (ENSHCOG00000005723) DMGDH (ENSHCOG00000005714) bhmt (ENSHCOG00000005680) JMY (ENSHCOG00000005667) HOMER1 (ENSHCOG00000005649) DTWD2 (ENSHCOG00000005623) tia1 (ENSHCOG00000005609) C2orf42 (ENSHCOG00000005585) ENSHCOG00000005582 TRAF2 (ENSHCOG00000005573) ENSHCOG00000000175 Pinecone sodierfish MODERN SPECIES 3 tor1 (ENSMMDG00005021756) #7 egfl7 (ENSMMDG00005021759) agpat2 (ENSMMDG00005021762) FNBP1 (ENSMMDG00005021792) #11 ENSMMDG00005022348 ENSMMDG00005022351 ENSMMDG00005022352 mrps2 (ENSMMDG00005022354) dipk1b (ENSMMDG00005022355) ttll11 (ENSMMDG00005022356) dab2ipb (ENSMMDG00005022383) ENSMMDG00005023249 zgc:63972 (ENSMMDG00005023250) fibcd1b (ENSMMDG00005023256) ##20 ENSMMDG00005023274 aif1l (ENSMMDG00005023336) #22 prkaa1 (ENSMMDG00005023345) ttc33 (ENSMMDG00005023366) ptger4b (ENSMMDG00005023369) NSMF (ENSMMDG00005023375) ENSMMDG00005023402 clic3 (ENSMMDG00005023595) fut7 (ENSMMDG00005023597) pou5f3 (ENSMMDG00005023598) npdc1a (ENSMMDG00005023601) ENSMMDG00005023610 anxa3b (ENSMMDG00005023626) rcl1 (ENSMMDG00005023650) ak3 (ENSMMDG00005023654) cdc37l1 (ENSMMDG00005023657) fam136a (ENSMMDG00005023659) Osteoglossiformes ANCESTRAL SPECIES 122 ENSGT00510000048748 ENSGT00940000181451 ENSGT00940000166353 ENSGT00940000158101.b ENSGT00940000160353.a.a ENSGT00500000044989 ENSGT00940000160987 ENSGT00940000161643.b ENSGT00940000159362.b ENSGT00940000164999 ENSGT00940000156689 ENSGT00940000155853.d.a ENSGT00390000017030.b.a ENSGT00940000155976.b.a.b ##20 ENSGT00940000166104 ENSGT00390000013846.a.a #22 ENSGT00390000000529.m ENSGT00940000159607 ENSGT00950000183047.d.g #11 ENSGT00950000182888.a.a.a #7 ENSGT00940000160015.a ENSGT00390000008726.h.a.g ENSGT00390000006452.b.a.a ENSGT00390000017382 ENSGT00390000014118 ENSGT00940000156959.A.b ENSGT00940000159211.C.hd.a.b ENSGT00940000159211.C.hd.b ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 P. kingsleyae MODERN SPECIES 88 ENSPKIG00000025062 RPL7A (ENSPKIG00000025056) med22 (ENSPKIG00000025044) zgc:103692 (ENSPKIG00000025036) #9 usp20 (ENSPKIG00000025022) #10 ptges (ENSPKIG00000025010) PRRX2 (ENSPKIG00000024999) ENSPKIG00000024987 garnl3 (ENSPKIG00000024957) ttll11 (ENSPKIG00000024931) ENSPKIG00000024923 dab2ipb (ENSPKIG00000024869) zgc:63972 (ENSPKIG00000024829) fibcd1b (ENSPKIG00000024817) ##20 ENSPKIG00000024796 aif1l (ENSPKIG00000024785) #22 CACFD1 (ENSPKIG00000024772) REXO4 (ENSPKIG00000024761) FNBP1 (ENSPKIG00000024702) #11 tor1 (ENSPKIG00000024662) #7 tor1 (ENSPKIG00000024649) #7 ENSPKIG00000024644 #7 Asian bonytongue MODERN SPECIES 21 surf6 (ENSSFOG00015026175) surf1 (ENSSFOG00015033276) RPL7A (ENSSFOG00015029564) med22 (ENSSFOG00015024837) zgc:103692 (ENSSFOG00015016775) #9 usp20 (ENSSFOG00015016818) #10 ptges (ENSSFOG00015025617) PRRX2 (ENSSFOG00015016927) garnl3 (ENSSFOG00015016948) ENSSFOG00015028303 ttll11 (ENSSFOG00015017204) dab2ipb (ENSSFOG00015017236) zgc:63972 (ENSSFOG00015017291) fibcd1b (ENSSFOG00015017301) ##20 ENSSFOG00015017314 aif1l (ENSSFOG00015017354) #22 CACFD1 (ENSSFOG00015017372) REXO4 (ENSSFOG00015017394) fnbp1a (ENSSFOG00015017451) #11 tor1 (ENSSFOG00015017558) #7 egfl7 (ENSSFOG00015020412) agpat2 (ENSSFOG00015020397) dipk1b (ENSSFOG00015020385) mrps2 (ENSSFOG00015028181) ENSSFOG00015031650 olfm1a (ENSSFOG00015020327) ENSSFOG00015011054 ENSSFOG00015011075 lhx5 (ENSSFOG00015020148) mzt2b (ENSSFOG00015020132) zgc:193801 (ENSSFOG00015020110) Spotted gar MODERN SPECIES 660 phf19 (ENSLOCG00000006428) traf1 (ENSLOCG00000006409) fibcd1b (ENSLOCG00000006394) ##20 ENSLOCG00000006369 ENSLOCG00000006357 aif1l (ENSLOCG00000006343) #22 NUP214 (ENSLOCG00000006323) #23 fam78ab (ENSLOCG00000006312) #24 plpp7a (ENSLOCG00000006288) #25 PRRC2B (ENSLOCG00000006253) #26 pomt1 (ENSLOCG00000006233) #27 uck1 (ENSLOCG00000006214) #28 sh3glb2b (ENSLOCG00000006193) PIP5KL1 (ENSLOCG00000006176) dpm2 (ENSLOCG00000006158) eeig1b (ENSLOCG00000006144) naif1 (ENSLOCG00000006120) slc25a25a (ENSLOCG00000006102) uap1l1 (ENSLOCG00000006083) zdhhc12a (ENSLOCG00000006071) ENSLOCG00000006047 Reedfish MODERN SPECIES 127 ENSECRG00000014014 aif1l (ENSECRG00000013976) #22 ENSECRG00000013872 fam78ab (ENSECRG00000013842) #24 plpp7a (ENSECRG00000013825) #25