Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Primates	ANCESTRAL SPECIES	9	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00940000165095	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00940000165095	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a ##13	ENSGT00940000165095	ENSGT00390000004524.d ##13	ENSGT00390000004524.c.a.b #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.b.a #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.b.a #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Marmoset	MODERN SPECIES		ENSCJAG00000020318 #7	USP20 (ENSCJAG00000020348) #8	FNBP1 (ENSCJAG00000020360) #9	GPR107 (ENSCJAG00000020376) #10	ENSCJAG00000020388 #11	HMCN2 (ENSCJAG00000020578) #12	ENSCJAG00000020554 #13	FUBP3 (ENSCJAG00000020542) #14	PRDM12 (ENSCJAG00000081665) #15	EXOSC2 (ENSCJAG00000020537) #16	ENSCJAG00000087080 #17	ABL1 (ENSCJAG00000020525) #18	QRFP (ENSCJAG00000023270) #19	FIBCD1 (ENSCJAG00000070440) #20	LAMC3 (ENSCJAG00000008567) #21	AIF1L (ENSCJAG00000082553) #22	NUP214 (ENSCJAG00000008476) #23	FAM78A (ENSCJAG00000056875) #24	PLPP7 (ENSCJAG00000008460) #25	ENSCJAG00000075695 #26	PRRC2B (ENSCJAG00000008416) #27	POMT1 (ENSCJAG00000008387) #28	UCK1 (ENSCJAG00000008370) #29	PRRT1B (ENSCJAG00000042543) #30	RAPGEF1 (ENSCJAG00000008301) #31	MED27 (ENSCJAG00000018305) #32	ENSCJAG00000085067 #33	NTNG2 (ENSCJAG00000018288) #34	SETX (ENSCJAG00000018245) #35	TTF1 (ENSCJAG00000018230) #36	CFAP77 (ENSCJAG00000018226) #37
Cebidae_a	ANCESTRAL SPECIES	76	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.b.a #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Capuchin	MODERN SPECIES	254	C9orf78 (ENSCCAG00000031507) #7	USP20 (ENSCCAG00000036441) #8	ENSCCAG00000026582	FNBP1 (ENSCCAG00000027876) #9	ENSCCAG00000023927	GPR107 (ENSCCAG00000023523) #10	NCS1 (ENSCCAG00000004740)	HMCN2 (ENSCCAG00000030148) #12	ASS1 (ENSCCAG00000019714) #13	FUBP3 (ENSCCAG00000036313) #14	PRDM12 (ENSCCAG00000037485) #15	EXOSC2 (ENSCCAG00000019749) #16	ABL1 (ENSCCAG00000024305) #18	FIBCD1 (ENSCCAG00000021809) #20	LAMC3 (ENSCCAG00000032210) #21	AIF1L (ENSCCAG00000028559) #22	NUP214 (ENSCCAG00000029930) #23	FAM78A (ENSCCAG00000030026) #24	PLPP7 (ENSCCAG00000034918) #25	PRRC2B (ENSCCAG00000021389) #27	POMT1 (ENSCCAG00000021653) #28	UCK1 (ENSCCAG00000029994) #29	PRRT1B (ENSCCAG00000030500) #30	RAPGEF1 (ENSCCAG00000033960) #31	MED27 (ENSCCAG00000036779) #32
Bolivian squirrel monkey	MODERN SPECIES	43	VPS13A (ENSSBOG00000020923)	GNA14 (ENSSBOG00000027170)	GNAQ (ENSSBOG00000021413)	CEP78 (ENSSBOG00000025965)	PSAT1 (ENSSBOG00000035275)	ENSSBOG00000020286	ENSSBOG00000026941 #11	HMCN2 (ENSSBOG00000033989) #12	ENSSBOG00000021830 #13	FUBP3 (ENSSBOG00000021755) #14	ENSSBOG00000029129	EXOSC2 (ENSSBOG00000022712) #16	ABL1 (ENSSBOG00000029514) #18	FIBCD1 (ENSSBOG00000031329) #20	LAMC3 (ENSSBOG00000029307) #21	AIF1L (ENSSBOG00000026358) #22	ENSSBOG00000029007	NUP214 (ENSSBOG00000024522) #23	FAM78A (ENSSBOG00000017452) #24	PLPP7 (ENSSBOG00000026128) #25	PRRC2B (ENSSBOG00000024898) #27	POMT1 (ENSSBOG00000030442) #28	UCK1 (ENSSBOG00000028224) #29	PRRT1B (ENSSBOG00000026276) #30	RAPGEF1 (ENSSBOG00000034342) #31	MED27 (ENSSBOG00000024507) #32
Mas night monkey	MODERN SPECIES	768	TOR1A (ENSANAG00000022800)	C9orf78 (ENSANAG00000037186) #7	USP20 (ENSANAG00000033852) #8	FNBP1 (ENSANAG00000034541) #9	GPR107 (ENSANAG00000028584) #10	ENSANAG00000019861	ENSANAG00000023513	HMCN2 (ENSANAG00000024488) #12	ENSANAG00000029569 #13	FUBP3 (ENSANAG00000022905) #14	PRDM12 (ENSANAG00000020616) #15	EXOSC2 (ENSANAG00000036779) #16	ABL1 (ENSANAG00000029873) #18	FIBCD1 (ENSANAG00000031975) #20	LAMC3 (ENSANAG00000035600) #21	AIF1L (ENSANAG00000023994) #22	ENSANAG00000034120	NUP214 (ENSANAG00000035012) #23	FAM78A (ENSANAG00000029154) #24	PLPP7 (ENSANAG00000020976) #25	PRRC2B (ENSANAG00000025301) #27	POMT1 (ENSANAG00000021615) #28	UCK1 (ENSANAG00000033402) #29	PRRT1B (ENSANAG00000033367) #30	RAPGEF1 (ENSANAG00000030130) #31	MED27 (ENSANAG00000035284) #32	NTNG2 (ENSANAG00000027447) #34	SETX (ENSANAG00000028057) #35	ENSANAG00000037080 #36	CFAP77 (ENSANAG00000020872) #37	BARHL1 (ENSANAG00000023140)
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00910000147740	ENSGT00940000165095	ENSGT00390000004524.d ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT01010000230328 #17	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000160451 #10	ENSGT00940000163010 #11	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00910000147740	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00910000148028	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207.j #32	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b #32	ENSGT00940000153601.a.a #34
Hominidae	ANCESTRAL SPECIES	10	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000163010 #11	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207.j #32	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000163010 #11	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Gorilla	MODERN SPECIES	22	C9orf78 (ENSGGOG00000013358) #7	USP20 (ENSGGOG00000003539) #8	FNBP1 (ENSGGOG00000003548) #9	GPR107 (ENSGGOG00000001256) #10	ENSGGOG00000001210 #11	HMCN2 (ENSGGOG00000010199) #12	ASS1 (ENSGGOG00000010228) ##13	ENSGGOG00000039090	FUBP3 (ENSGGOG00000011318) #14	PRDM12 (ENSGGOG00000010568) #15	EXOSC2 (ENSGGOG00000010578) #16	ABL1 (ENSGGOG00000010586) #18	QRFP (ENSGGOG00000010600) #19	FIBCD1 (ENSGGOG00000010605) #20	LAMC3 (ENSGGOG00000017164) #21	AIF1L (ENSGGOG00000017168) #22	NUP214 (ENSGGOG00000017169) #23	FAM78A (ENSGGOG00000017172) #24	PLPP7 (ENSGGOG00000017173) #25	PRRC2B (ENSGGOG00000012502) #27	ENSGGOG00000041833	POMT1 (ENSGGOG00000012525) #28	ENSGGOG00000036394	UCK1 (ENSGGOG00000012550) #29	PRRT1B (ENSGGOG00000026372) #30	RAPGEF1 (ENSGGOG00000008226) #31	ENSGGOG00000039160	ENSGGOG00000036257	MED27 (ENSGGOG00000010390) #32	NTNG2 (ENSGGOG00000016200) #34	SETX (ENSGGOG00000027664) #35
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT01010000230328 #17	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Pan	ANCESTRAL SPECIES	18	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.g #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207.i.b #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36
Chimpanzee	MODERN SPECIES	22	C9H9orf78 (ENSPTRG00000021465) #7	USP20 (ENSPTRG00000021466) #8	FNBP1 (ENSPTRG00000021468) #9	GPR107 (ENSPTRG00000021469) #10	ENSPTRG00000042947	NCS1 (ENSPTRG00000047046)	HMCN2 (ENSPTRG00000021471) #12	ASS1 (ENSPTRG00000021473) ##13	FUBP3 (ENSPTRG00000021474) #14	PRDM12 (ENSPTRG00000021475) #15	EXOSC2 (ENSPTRG00000021476) #16	ABL1 (ENSPTRG00000021477) #18	QRFP (ENSPTRG00000021478) #19	ENSPTRG00000021479 #20	LAMC3 (ENSPTRG00000021480) #21	AIF1L (ENSPTRG00000021481) #22	NUP214 (ENSPTRG00000021482) #23	FAM78A (ENSPTRG00000021484) #24	PLPP7 (ENSPTRG00000021485) #25	PRRC2B (ENSPTRG00000021487) #27	ENSPTRG00000048981	POMT1 (ENSPTRG00000021488) #28	UCK1 (ENSPTRG00000021489) #29	PRRT1B (ENSPTRG00000051275) #30	RAPGEF1 (ENSPTRG00000021490) #31	ENSPTRG00000043931	ENSPTRG00000047190	MED27 (ENSPTRG00000021492) #32	NTNG2 (ENSPTRG00000021493) #34	SETX (ENSPTRG00000021495) #35	TTF1 (ENSPTRG00000021496) #36
Bonobo	MODERN SPECIES	22	C9orf78 (ENSPPAG00000032236) #7	USP20 (ENSPPAG00000043597) #8	FNBP1 (ENSPPAG00000014368) #9	GPR107 (ENSPPAG00000031540) #10	ENSPPAG00000023411	NCS1 (ENSPPAG00000034386)	HMCN2 (ENSPPAG00000030138) #12	ASS1 (ENSPPAG00000035214) ##13	FUBP3 (ENSPPAG00000011103) #14	ENSPPAG00000031506 #15	EXOSC2 (ENSPPAG00000034796) #16	ABL1 (ENSPPAG00000036322) #18	QRFP (ENSPPAG00000009604) #19	FIBCD1 (ENSPPAG00000040268) #20	LAMC3 (ENSPPAG00000034248) #21	AIF1L (ENSPPAG00000020728) #22	NUP214 (ENSPPAG00000034806) #23	FAM78A (ENSPPAG00000031835) #24	PLPP7 (ENSPPAG00000040214) #25	PRRC2B (ENSPPAG00000035196) #27	ENSPPAG00000038076	POMT1 (ENSPPAG00000027406) #28	UCK1 (ENSPPAG00000042930) #29	ENSPPAG00000033521 #30	RAPGEF1 (ENSPPAG00000040344) #31	ENSPPAG00000043227	ENSPPAG00000034497	MED27 (ENSPPAG00000043027) #32	NTNG2 (ENSPPAG00000036118) #34	SETX (ENSPPAG00000004108) #35	TTF1 (ENSPPAG00000029768) #36
Human	MODERN SPECIES	21	C9orf78 (ENSG00000136819) #7	USP20 (ENSG00000136878) #8	FNBP1 (ENSG00000187239) #9	GPR107 (ENSG00000148358) #10	NCS1 (ENSG00000107130)	HMCN2 (ENSG00000148357) #12	ASS1 (ENSG00000130707) ##13	FUBP3 (ENSG00000107164) #14	PRDM12 (ENSG00000130711) #15	EXOSC2 (ENSG00000130713) #16	ABL1 (ENSG00000097007) #18	ENSG00000288570 #17	QRFP (ENSG00000188710) #19	FIBCD1 (ENSG00000130720) #20	LAMC3 (ENSG00000050555) #21	AIF1L (ENSG00000126878) #22	NUP214 (ENSG00000126883) #23	FAM78A (ENSG00000126882) #24	PLPP7 (ENSG00000160539) #25	PRRC2B (ENSG00000288701) #27	ENSG00000291303	ENSG00000288841	POMT1 (ENSG00000130714) #28	UCK1 (ENSG00000130717) #29	PRRT1B (ENSG00000283526) #30	RAPGEF1 (ENSG00000107263) #31	MED27 (ENSG00000160563) #32	NTNG2 (ENSG00000196358) #34	SETX (ENSG00000107290) #35	TTF1 (ENSG00000125482) #36	CFAP77 (ENSG00000188523) #37
Orangutan	MODERN SPECIES	22	C9H9orf78 (ENSPPYG00000019685) #7	USP20 (ENSPPYG00000019686) #8	FNBP1 (ENSPPYG00000019687) #9	GPR107 (ENSPPYG00000019688) #10	NCS1 (ENSPPYG00000030119)	HMCN2 (ENSPPYG00000036670) #12	ASS1 (ENSPPYG00000019692) ##13	FUBP3 (ENSPPYG00000019693) #14	PRDM12 (ENSPPYG00000019694) #15	EXOSC2 (ENSPPYG00000019695) #16	ENSPPYG00000031031 #17	ABL1 (ENSPPYG00000041735) #18	ENSPPYG00000041307 #19	FIBCD1 (ENSPPYG00000019871) #20	LAMC3 (ENSPPYG00000019697) #21	AIF1L (ENSPPYG00000019698) #22	NUP214 (ENSPPYG00000019699) #23	FAM78A (ENSPPYG00000019700) #24	PLPP7 (ENSPPYG00000019701) #25	PRRC2B (ENSPPYG00000019702) #27	POMT1 (ENSPPYG00000019703) #28	UCK1 (ENSPPYG00000019704) #29	PRRT1B (ENSPPYG00000041277) #30	RAPGEF1 (ENSPPYG00000019705) #31	MED27 (ENSPPYG00000019706) #32	NTNG2 (ENSPPYG00000019707) #34	SETX (ENSPPYG00000019708) #35	TTF1 (ENSPPYG00000019709) #36	CFAP77 (ENSPPYG00000019710) #37	BARHL1 (ENSPPYG00000039031)	DDX31 (ENSPPYG00000019713)
Gibbon	MODERN SPECIES	23	C9orf78 (ENSNLEG00000017658) #7	USP20 (ENSNLEG00000017660) #8	FNBP1 (ENSNLEG00000017666) #9	GPR107 (ENSNLEG00000017669) #10	ENSNLEG00000017681	ENSNLEG00000017684 #11	HMCN2 (ENSNLEG00000031471) #12	ENSNLEG00000012500 ##13	ENSNLEG00000027365	FUBP3 (ENSNLEG00000012523) #14	ENSNLEG00000012531	EXOSC2 (ENSNLEG00000012533) #16	ABL1 (ENSNLEG00000012556) #18	FIBCD1 (ENSNLEG00000012569) #20	LAMC3 (ENSNLEG00000012583) #21	ENSNLEG00000012595 #22	ENSNLEG00000033847	NUP214 (ENSNLEG00000012614) #23	ENSNLEG00000012715 #24	PLPP7 (ENSNLEG00000028247) #25	PRRC2B (ENSNLEG00000012721) #27	POMT1 (ENSNLEG00000012757) #28	UCK1 (ENSNLEG00000012812) #29	PRRT1B (ENSNLEG00000012825) #30	RAPGEF1 (ENSNLEG00000012826) #31	ENSNLEG00000029445	MED27 (ENSNLEG00000012828) #32	NTNG2 (ENSNLEG00000012836) #34	SETX (ENSNLEG00000012839) #35	TTF1 (ENSNLEG00000012847) #36	CFAP77 (ENSNLEG00000012857) #37
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00910000147740	ENSGT00940000165095	ENSGT00390000004524.d ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.e ##13	ENSGT00940000156744.e #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Golden snub-nosed monkey	MODERN SPECIES	923	TOR1B (ENSRROG00000028784)	TOR1A (ENSRROG00000040520)	C9orf78 (ENSRROG00000041927) #7	USP20 (ENSRROG00000036984) #8	FNBP1 (ENSRROG00000005509) #9	GPR107 (ENSRROG00000043544) #10	NCS1 (ENSRROG00000006485)	HMCN2 (ENSRROG00000031883) #12	ENSRROG00000018913 ##13	ENSRROG00000030006 #14	PRDM12 (ENSRROG00000043554) #15	ENSRROG00000010827 #16	ABL1 (ENSRROG00000032347) #18	FIBCD1 (ENSRROG00000042577) #20	LAMC3 (ENSRROG00000044719) #21	AIF1L (ENSRROG00000042815) #22	NUP214 (ENSRROG00000034753) #23	FAM78A (ENSRROG00000041336) #24	PLPP7 (ENSRROG00000039458) #25
Black snub-nosed monkey	MODERN SPECIES	1482										ENSRBIG00000042110 #14	PRDM12 (ENSRBIG00000042712) #15	ENSRBIG00000031203 #16	ABL1 (ENSRBIG00000027673) #18	FIBCD1 (ENSRBIG00000032843) #20	LAMC3 (ENSRBIG00000030316) #21	AIF1L (ENSRBIG00000042532) #22	NUP214 (ENSRBIG00000038320) #23	FAM78A (ENSRBIG00000044775) #24	PLPP7 (ENSRBIG00000027211) #25	PRRC2B (ENSRBIG00000037068) #27	POMT1 (ENSRBIG00000041158) #28	UCK1 (ENSRBIG00000029355) #29	PRRT1B (ENSRBIG00000035844) #30	ENSRBIG00000040714	RAPGEF1 (ENSRBIG00000035534) #31	MED27 (ENSRBIG00000042484) #32	NTNG2 (ENSRBIG00000044877) #34	SETX (ENSRBIG00000040526) #35	TTF1 (ENSRBIG00000033654) #36	CFAP77 (ENSRBIG00000038278) #37	CASTOR2 (ENSRBIG00000044309)
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b ##13	ENSGT00910000147740	ENSGT00940000165095	ENSGT00390000004524.d ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Vervet Monkey	MODERN SPECIES	3	C9orf78 (ENSCSAG00000014663) #7	USP20 (ENSCSAG00000014672) #8	FNBP1 (ENSCSAG00000014702) #9	GPR107 (ENSCSAG00000014709) #10	ENSCSAG00000014716 #11	ENSCSAG00000014723 #12	ENSCSAG00000014730	ENSCSAG00000014739 ##13	FUBP3 (ENSCSAG00000014748) #14	PRDM12 (ENSCSAG00000014756) #15	ENSCSAG00000014760 #16	ABL1 (ENSCSAG00000014767) #18	QRFP (ENSCSAG00000019708) #19	FIBCD1 (ENSCSAG00000014786) #20	ENSCSAG00000014800 #21	AIF1L (ENSCSAG00000014809) #22	NUP214 (ENSCSAG00000014824) #23	FAM78A (ENSCSAG00000014833) #24	PLPP7 (ENSCSAG00000014839) #25	PRRC2B (ENSCSAG00000014854) #27	POMT1 (ENSCSAG00000014870) #28	UCK1 (ENSCSAG00000014877) #29	RAPGEF1 (ENSCSAG00000014892) #31	MED27 (ENSCSAG00000014901) #32	NTNG2 (ENSCSAG00000014906) #34	SETX (ENSCSAG00000014918) #35	TTF1 (ENSCSAG00000014926) #36	CFAP77 (ENSCSAG00000014940) #37	BARHL1 (ENSCSAG00000014946)	DDX31 (ENSCSAG00000014953)	GTF3C4 (ENSCSAG00000014958)
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.d.b ##13	ENSGT00910000147740	ENSGT00910000148843	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000163010 #11	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.d.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147295	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Olive baboon	MODERN SPECIES	4	USP20 (ENSPANG00000025975) #8	FNBP1 (ENSPANG00000025974) #9	GPR107 (ENSPANG00000025973) #10	ENSPANG00000033050 #11	HMCN2 (ENSPANG00000025970) #12	ENSPANG00000025969 ##13	FUBP3 (ENSPANG00000025968) #14	PRDM12 (ENSPANG00000025967) #15	ENSPANG00000025966 #16	ENSPANG00000050722 #17	ABL1 (ENSPANG00000025965) #18	ENSPANG00000044231	QRFP (ENSPANG00000048091) #19	FIBCD1 (ENSPANG00000048721) #20	LAMC3 (ENSPANG00000025978) #21	AIF1L (ENSPANG00000025979) #22	NUP214 (ENSPANG00000025984) #23	FAM78A (ENSPANG00000025983) #24	PLPP7 (ENSPANG00000025982) #25	PRRC2B (ENSPANG00000025981) #27	POMT1 (ENSPANG00000025980) #28	UCK1 (ENSPANG00000025985) #29	PRRT1B (ENSPANG00000025986) #30	RAPGEF1 (ENSPANG00000025994) #31	MED27 (ENSPANG00000025993) #32	NTNG2 (ENSPANG00000025992) #34	SETX (ENSPANG00000025990) #35	TTF1 (ENSPANG00000035653) #36	CFAP77 (ENSPANG00000025989) #37	BARHL1 (ENSPANG00000025988)	DDX31 (ENSPANG00000025987)
Cercopithecinae_d	ANCESTRAL SPECIES	56	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00910000146910	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.d.b ##13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25
Sooty mangabey	MODERN SPECIES	489	TOR1A (ENSCATG00000045229)	C9orf78 (ENSCATG00000045151) #7	USP20 (ENSCATG00000004362) #8	FNBP1 (ENSCATG00000043882) #9	GPR107 (ENSCATG00000034370) #10	ENSCATG00000032284	NCS1 (ENSCATG00000033117)	HMCN2 (ENSCATG00000035048) #12	ENSCATG00000013316 ##13	FUBP3 (ENSCATG00000015864) #14	PRDM12 (ENSCATG00000020327) #15	ENSCATG00000025389 #16	ABL1 (ENSCATG00000032564) #18	FIBCD1 (ENSCATG00000030096) #20	LAMC3 (ENSCATG00000033155) #21	AIF1L (ENSCATG00000035596) #22	NUP214 (ENSCATG00000032085) #23	FAM78A (ENSCATG00000030308) #24	PLPP7 (ENSCATG00000039081) #25
Drill	MODERN SPECIES	1729	TOR1A (ENSMLEG00000043366)	C9orf78 (ENSMLEG00000031172) #7	USP20 (ENSMLEG00000041454) #8	FNBP1 (ENSMLEG00000035886) #9	GPR107 (ENSMLEG00000042178) #10	ENSMLEG00000039046	ENSMLEG00000038111 #11	HMCN2 (ENSMLEG00000039936) #12	ENSMLEG00000039436 ##13	FUBP3 (ENSMLEG00000037030) #14	ENSMLEG00000036399	ENSMLEG00000042587 #16	ABL1 (ENSMLEG00000021955) #18	FIBCD1 (ENSMLEG00000043288) #20	LAMC3 (ENSMLEG00000035131) #21	AIF1L (ENSMLEG00000042949) #22	NUP214 (ENSMLEG00000038158) #23	FAM78A (ENSMLEG00000034280) #24	PLPP7 (ENSMLEG00000043423) #25
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.d.b ##13	ENSGT00910000147740	ENSGT00910000148843	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00910000147033	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Pig-tailed macaque	MODERN SPECIES	317	TOR1A (ENSMNEG00000040996)	C9orf78 (ENSMNEG00000036833) #7	USP20 (ENSMNEG00000031133) #8	FNBP1 (ENSMNEG00000038706) #9	GPR107 (ENSMNEG00000029615) #10	ENSMNEG00000034406 #11	HMCN2 (ENSMNEG00000019710) #12	ASS1 (ENSMNEG00000044006) ##13	ENSMNEG00000020943	FUBP3 (ENSMNEG00000039622) #14	PRDM12 (ENSMNEG00000037234) #15	ENSMNEG00000031861 #16	ABL1 (ENSMNEG00000028224) #18	FIBCD1 (ENSMNEG00000041044) #20	LAMC3 (ENSMNEG00000030621) #21	AIF1L (ENSMNEG00000030005) #22	NUP214 (ENSMNEG00000044802) #23	FAM78A (ENSMNEG00000033509) #24	PLPP7 (ENSMNEG00000030651) #25	PRRC2B (ENSMNEG00000028780) #27	POMT1 (ENSMNEG00000041652) #28	UCK1 (ENSMNEG00000036653) #29	PRRT1B (ENSMNEG00000042784) #30	RAPGEF1 (ENSMNEG00000029854) #31	ENSMNEG00000041728	MED27 (ENSMNEG00000033749) #32	NTNG2 (ENSMNEG00000033050) #34	SETX (ENSMNEG00000030657) #35	TTF1 (ENSMNEG00000028059) #36	CFAP77 (ENSMNEG00000039824) #37	DDX31 (ENSMNEG00000045539)
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524.c.a.a.a.b.d.b ##13	ENSGT00910000147740	ENSGT00910000148843	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B.h #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT01100000263539.b.a.a.a.b.b.b.a.b.a.a.b	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT01100000263493.a.b.a.a.b.b.b.b.a.a.b.a	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.a.b	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Rhesus	MODERN SPECIES	6	GPR107 (ENSMMUG00000004200) #10	ENSMMUG00000049177	ENSMMUG00000061477	HMCN2 (ENSMMUG00000047733) #12	ENSMMUG00000001522 ##13	ENSMMUG00000053919	ENSMMUG00000063163	FUBP3 (ENSMMUG00000008249) #14	PRDM12 (ENSMMUG00000059085) #15	EXOSC2 (ENSMMUG00000012498) #16	ABL1 (ENSMMUG00000012499) #18	QRFP (ENSMMUG00000064112) #19	FIBCD1 (ENSMMUG00000012713) #20	ENSMMUG00000061789	LAMC3 (ENSMMUG00000002267) #21	AIF1L (ENSMMUG00000042881) #22	FAM78A (ENSMMUG00000021278) #24	PLPP7 (ENSMMUG00000047768) #25	ENSMMUG00000063727	NUP214 (ENSMMUG00000021724) #23	PRRC2B (ENSMMUG00000009973) #27	POMT1 (ENSMMUG00000009975) #28	UCK1 (ENSMMUG00000009976) #29	PRRT1B (ENSMMUG00000058925) #30	RAPGEF1 (ENSMMUG00000006479) #31	MED27 (ENSMMUG00000001727) #32	ENSMMUG00000058353	NTNG2 (ENSMMUG00000006923) #34	SETX (ENSMMUG00000018468) #35	TTF1 (ENSMMUG00000006833) #36	CFAP77 (ENSMMUG00000004588) #37
Crab-eating macaque	MODERN SPECIES	6	ENSMFAG00000036140 #12	ASS1 (ENSMFAG00000003315) ##13	ENSMFAG00000058109	ENSMFAG00000061702	ENSMFAG00000047356	FUBP3 (ENSMFAG00000038309) #14	PRDM12 (ENSMFAG00000040322) #15	ENSMFAG00000000597 #16	ENSMFAG00000056552	ABL1 (ENSMFAG00000000271) #18	QRFP (ENSMFAG00000056880) #19	FIBCD1 (ENSMFAG00000003220) #20	ENSMFAG00000058941	LAMC3 (ENSMFAG00000042402) #21	ENSMFAG00000062689	AIF1L (ENSMFAG00000000641) #22	NUP214 (ENSMFAG00000042823) #23	FAM78A (ENSMFAG00000038474) #24	PLPP7 (ENSMFAG00000042509) #25	ENSMFAG00000057079	PRRC2B (ENSMFAG00000002662) #27	POMT1 (ENSMFAG00000038316) #28	UCK1 (ENSMFAG00000005947) #29	PRRT1B (ENSMFAG00000058024) #30	RAPGEF1 (ENSMFAG00000038154) #31	MED27 (ENSMFAG00000003320) #32	ENSMFAG00000047252	NTNG2 (ENSMFAG00000045866) #34	ENSMFAG00000052185	ENSMFAG00000055541	SETX (ENSMFAG00000039742) #35
Tarsier	MODERN SPECIES	4272															LAMC3 (ENSTSYG00000000408) #21	AIF1L (ENSTSYG00000030996) #22	NUP214 (ENSTSYG00000013176) #23
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00940000165095	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	202	FNBP1 (ENSOGAG00000034453) #9	GPR107 (ENSOGAG00000009786) #10	ENSOGAG00000024831 #11	ENSOGAG00000026068	ENSOGAG00000031371 #12	ENSOGAG00000028509 #12	ENSOGAG00000026452	ASS1 (ENSOGAG00000028692) #13	FUBP3 (ENSOGAG00000007555) #14	PRDM12 (ENSOGAG00000007557) #15	EXOSC2 (ENSOGAG00000007558) #16	ABL1 (ENSOGAG00000007562) #18	QRFP (ENSOGAG00000031928) #19	FIBCD1 (ENSOGAG00000007565) #20	LAMC3 (ENSOGAG00000016745) #21	ENSOGAG00000016759 #22	ENSOGAG00000034525	NUP214 (ENSOGAG00000016762) #23	FAM78A (ENSOGAG00000034553) #24	PLPP7 (ENSOGAG00000000761) #25	PRRC2B (ENSOGAG00000012796) #27	POMT1 (ENSOGAG00000012801) #28	ENSOGAG00000028797 #29	RAPGEF1 (ENSOGAG00000004147) #31	MED27 (ENSOGAG00000004158) #32	NTNG2 (ENSOGAG00000028768) #34	SETX (ENSOGAG00000013387) #35	TTF1 (ENSOGAG00000009611) #36	CFAP77 (ENSOGAG00000004070) #37	BARHL1 (ENSOGAG00000004071)	DDX31 (ENSOGAG00000004072)
Bushbaby	MODERN SPECIES	128	ENSOGAG00000032096	TMEM169 (ENSOGAG00000004438)	PECR (ENSOGAG00000004437)	MREG (ENSOGAG00000002252)	FN1 (ENSOGAG00000005042)	ATIC (ENSOGAG00000005039)	ABCA12 (ENSOGAG00000016828)	BARD1 (ENSOGAG00000009078)	VWC2L (ENSOGAG00000004042)	IKZF2 (ENSOGAG00000016680)	ENSOGAG00000010768	ENSOGAG00000028178	CPS1 (ENSOGAG00000005623)	LANCL1 (ENSOGAG00000005620)	MYL1 (ENSOGAG00000009848)	ENSOGAG00000027184 #22	ACADL (ENSOGAG00000009844)	KANSL1L (ENSOGAG00000002780)	ENSOGAG00000002778	UNC80 (ENSOGAG00000002771)	ENSOGAG00000025605	ENSOGAG00000024989	PTH2R (ENSOGAG00000007106)	PIKFYVE (ENSOGAG00000014853)	IDH1 (ENSOGAG00000014848)	C2orf80 (ENSOGAG00000014847)	ENSOGAG00000014842	CRYGC (ENSOGAG00000014846)	CRYGD (ENSOGAG00000025720)	ENSOGAG00000031316	ENSOGAG00000031869
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041
Greater bamboo lemur	MODERN SPECIES	638	TOR1B (ENSPSMG00000019444)	TOR1A (ENSPSMG00000019434)	C9orf78 (ENSPSMG00000019422) #7	USP20 (ENSPSMG00000019349) #8	FNBP1 (ENSPSMG00000019223) #9	GPR107 (ENSPSMG00000019182) #10	HMCN2 (ENSPSMG00000019168) #12	ASS1 (ENSPSMG00000019105) #13	FUBP3 (ENSPSMG00000019055) #14	PRDM12 (ENSPSMG00000019030) #15	EXOSC2 (ENSPSMG00000018996) #16	ABL1 (ENSPSMG00000018845) #18	QRFP (ENSPSMG00000018767) #19	FIBCD1 (ENSPSMG00000018761) #20	LAMC3 (ENSPSMG00000018744) #21	AIF1L (ENSPSMG00000018725) #22	ENSPSMG00000018705	NUP214 (ENSPSMG00000018673) #23	FAM78A (ENSPSMG00000018576) #24	PLPP7 (ENSPSMG00000018572) #25	PRRC2B (ENSPSMG00000018172) #27	POMT1 (ENSPSMG00000017780) #28	UCK1 (ENSPSMG00000017613) #29
Coquerels sifaka	MODERN SPECIES	168	TOR1A (ENSPCOG00000020399)	C9orf78 (ENSPCOG00000026688) #7	USP20 (ENSPCOG00000017362) #8	FNBP1 (ENSPCOG00000018475) #9	GPR107 (ENSPCOG00000024575) #10	NCS1 (ENSPCOG00000023614)	HMCN2 (ENSPCOG00000020292) #12	ASS1 (ENSPCOG00000016448) #13	FUBP3 (ENSPCOG00000022783) #14	PRDM12 (ENSPCOG00000022255) #15	EXOSC2 (ENSPCOG00000017639) #16	ENSPCOG00000027435	ABL1 (ENSPCOG00000028751) #18	FIBCD1 (ENSPCOG00000027218) #20	LAMC3 (ENSPCOG00000026068) #21	AIF1L (ENSPCOG00000027281) #22	NUP214 (ENSPCOG00000008758) #23	FAM78A (ENSPCOG00000024114) #24	PLPP7 (ENSPCOG00000013402) #25	ENSPCOG00000023940 #27	POMT1 (ENSPCOG00000024209) #28	UCK1 (ENSPCOG00000015238) #29	PRRT1B (ENSPCOG00000020619) #30	RAPGEF1 (ENSPCOG00000002269) #31	MED27 (ENSPCOG00000009676) #32	NTNG2 (ENSPCOG00000025244) #34	SETX (ENSPCOG00000022383) #35	ENSPCOG00000020045 #36	CFAP77 (ENSPCOG00000009926) #37	BARHL1 (ENSPCOG00000009751)	DDX31 (ENSPCOG00000010431)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Glires	ANCESTRAL SPECIES	9	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Lagomorpha	ANCESTRAL SPECIES	119								ENSGT00940000165095	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041
Rabbit	MODERN SPECIES	497																ENSOCUG00000024109 #22	NUP214 (ENSOCUG00000001005) #23	ENSOCUG00000026627	FAM78A (ENSOCUG00000006768) #24	PLPP7 (ENSOCUG00000000944) #25	PRRC2B (ENSOCUG00000010830) #27	ENSOCUG00000015146	ENSOCUG00000039206 #28	ENSOCUG00000022260 #28	ENSOCUG00000011867 #29	PRRT1B (ENSOCUG00000033464) #30	RAPGEF1 (ENSOCUG00000000234) #31	MED27 (ENSOCUG00000013118) #32	NTNG2 (ENSOCUG00000000134) #34	SETX (ENSOCUG00000005616) #35	ENSOCUG00000005633 #36
Pika	MODERN SPECIES	1061														FIBCD1 (ENSOPRG00000006560) #20	LAMC3 (ENSOPRG00000006567) #21	AIF1L (ENSOPRG00000006586) #22	NUP214 (ENSOPRG00000006594) #23	FAM78A (ENSOPRG00000006632) #24	ENSOPRG00000006639 #25
Rodentia	ANCESTRAL SPECIES	9	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041
Marmotini	ANCESTRAL SPECIES	1	ENSGT00390000009787.c #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000163010 #11	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787.c #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041	ENSGT00390000011873
Squirrel	MODERN SPECIES	87	TOR1A (ENSSTOG00000020075)	ENSSTOG00000020630 #7	USP20 (ENSSTOG00000005418) #8	FNBP1 (ENSSTOG00000013583) #9	GPR107 (ENSSTOG00000024511) #10	ENSSTOG00000025494 #11	ASS1 (ENSSTOG00000011597) #13	FUBP3 (ENSSTOG00000014105) #14	PRDM12 (ENSSTOG00000005986) #15	EXOSC2 (ENSSTOG00000005999) #16	ABL1 (ENSSTOG00000026819) #18	ENSSTOG00000014127	QRFP (ENSSTOG00000030261) #19	FIBCD1 (ENSSTOG00000003601) #20	LAMC3 (ENSSTOG00000011610) #21	AIF1L (ENSSTOG00000011627) #22	NUP214 (ENSSTOG00000011636) #23	FAM78A (ENSSTOG00000027424) #24	PLPP7 (ENSSTOG00000007982) #25	PRRC2B (ENSSTOG00000024364) #27	POMT1 (ENSSTOG00000004011) #28	UCK1 (ENSSTOG00000004058) #29	RAPGEF1 (ENSSTOG00000002466) #31	MED27 (ENSSTOG00000008925) #32	NTNG2 (ENSSTOG00000010575) #34	SETX (ENSSTOG00000021600) #35	TTF1 (ENSSTOG00000007957) #36	CFAP77 (ENSSTOG00000007973) #37	BARHL1 (ENSSTOG00000024230)	DDX31 (ENSSTOG00000007985)	ENSSTOG00000004976
Arctic ground squirrel	MODERN SPECIES	44	TOR1A (ENSUPAG00010018233)	C9orf78 (ENSUPAG00010018240) #7	USP20 (ENSUPAG00010018244) #8	FNBP1 (ENSUPAG00010018326) #9	GPR107 (ENSUPAG00010019131) #10	NCS1 (ENSUPAG00010019150)	HMCN2 (ENSUPAG00010019173) #12	ASS1 (ENSUPAG00010019269) #13	FUBP3 (ENSUPAG00010019280) #14	PRDM12 (ENSUPAG00010019289) #15	EXOSC2 (ENSUPAG00010019297) #16	ABL1 (ENSUPAG00010019305) #18	QRFP (ENSUPAG00010019319) #19	FIBCD1 (ENSUPAG00010019328) #20	LAMC3 (ENSUPAG00010019336) #21	AIF1L (ENSUPAG00010019397) #22	NUP214 (ENSUPAG00010019408) #23	FAM78A (ENSUPAG00010019454) #24	PLPP7 (ENSUPAG00010019458) #25	PRRC2B (ENSUPAG00010019495) #27	POMT1 (ENSUPAG00010023169) #28	UCK1 (ENSUPAG00010023170) #29	RAPGEF1 (ENSUPAG00010023174) #31	ENSUPAG00010023186	ENSUPAG00010023187	NEUROD4 (ENSUPAG00010023188)	ENSUPAG00010023190	ENSUPAG00010023191	ENSUPAG00010023193	ENSUPAG00010023194
Alpin marmot	MODERN SPECIES	47	TOR1B (ENSMMMG00000012963)	TOR1A (ENSMMMG00000012961)	C9orf78 (ENSMMMG00000012948) #7	USP20 (ENSMMMG00000012884) #8	FNBP1 (ENSMMMG00000012220) #9	GPR107 (ENSMMMG00000012179) #10	ENSMMMG00000012162 #11	HMCN2 (ENSMMMG00000012024) #12	ASS1 (ENSMMMG00000012003) #13	FUBP3 (ENSMMMG00000011935) #14	EXOSC2 (ENSMMMG00000011926) #16	ABL1 (ENSMMMG00000011924) #18	QRFP (ENSMMMG00000011895) #19	FIBCD1 (ENSMMMG00000011880) #20	LAMC3 (ENSMMMG00000011837) #21	AIF1L (ENSMMMG00000011817) #22	NUP214 (ENSMMMG00000011781) #23	FAM78A (ENSMMMG00000011780) #24	PLPP7 (ENSMMMG00000011773) #25	PRRC2B (ENSMMMG00000011717) #27	POMT1 (ENSMMMG00000011692) #28	UCK1 (ENSMMMG00000011656) #29	RAPGEF1 (ENSMMMG00000011529) #31	MED27 (ENSMMMG00000011517) #32	NTNG2 (ENSMMMG00000011377) #34	SETX (ENSMMMG00000011147) #35	TTF1 (ENSMMMG00000011133) #36	CFAP77 (ENSMMMG00000011095) #37	BARHL1 (ENSMMMG00000011083)	ENSMMMG00000011072	GTF3C4 (ENSMMMG00000011057)
Eurasian red squirrel	MODERN SPECIES	6	TOR1A (ENSSVLG00005025074)	C9orf78 (ENSSVLG00005025097) #7	USP20 (ENSSVLG00005025130) #8	FNBP1 (ENSSVLG00005025181) #9	GPR107 (ENSSVLG00005025232) #10	NCS1 (ENSSVLG00005025273)	ENSSVLG00005025309 #12	ASS1 (ENSSVLG00005025352) #13	FUBP3 (ENSSVLG00005025378) #14	PRDM12 (ENSSVLG00005025390) #15	EXOSC2 (ENSSVLG00005025425) #16	ABL1 (ENSSVLG00005025464) #18	QRFP (ENSSVLG00005025477) #19	FIBCD1 (ENSSVLG00005025486) #20	LAMC3 (ENSSVLG00005025507) #21	AIF1L (ENSSVLG00005025524) #22	NUP214 (ENSSVLG00005025553) #23	FAM78A (ENSSVLG00005025584) #24	PLPP7 (ENSSVLG00005025595) #25	PRRC2B (ENSSVLG00005025635) #27	POMT1 (ENSSVLG00005016596) #28	UCK1 (ENSSVLG00005016660) #29	PRRT1B (ENSSVLG00005016788) #30	RAPGEF1 (ENSSVLG00005016872) #31	MED27 (ENSSVLG00005017453) #32	ENSSVLG00005017582	NTNG2 (ENSSVLG00005017637) #34	SETX (ENSSVLG00005017731) #35	ENSSVLG00005017981 #36	CFAP77 (ENSSVLG00005018111) #37	BARHL1 (ENSSVLG00005018193)
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00910000148672	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000163010 #11	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Long-tailed chinchilla	MODERN SPECIES	220	TOR1B (ENSCLAG00000008038)	TOR1A (ENSCLAG00000008135)	C9orf78 (ENSCLAG00000005362) #7	USP20 (ENSCLAG00000005589) #8	FNBP1 (ENSCLAG00000006794) #9	GPR107 (ENSCLAG00000008972) #10	ENSCLAG00000009788 #11	ASS1 (ENSCLAG00000009951) #13	FUBP3 (ENSCLAG00000009005) #14	PRDM12 (ENSCLAG00000005499) #15	EXOSC2 (ENSCLAG00000006195) #16	ABL1 (ENSCLAG00000012898) #18	QRFP (ENSCLAG00000015339) #19	FIBCD1 (ENSCLAG00000016865) #20	LAMC3 (ENSCLAG00000011206) #21	AIF1L (ENSCLAG00000004225) #22	ENSCLAG00000005147	ENSCLAG00000005455 #23	FAM78A (ENSCLAG00000005607) #24	PLPP7 (ENSCLAG00000005966) #25	PRRC2B (ENSCLAG00000006317) #27	POMT1 (ENSCLAG00000005548) #28	UCK1 (ENSCLAG00000006376) #29	RAPGEF1 (ENSCLAG00000007111) #31	MED27 (ENSCLAG00000010715) #32	NTNG2 (ENSCLAG00000010283) #34	SETX (ENSCLAG00000012582) #35	ENSCLAG00000012676 #36	CFAP77 (ENSCLAG00000012901) #37	BARHL1 (ENSCLAG00000013082)	DDX31 (ENSCLAG00000008431)
Degu	MODERN SPECIES	164	ENSODEG00000017319 #7	USP20 (ENSODEG00000016809) #8	FNBP1 (ENSODEG00000016898) #9	GPR107 (ENSODEG00000016679) #10	NCS1 (ENSODEG00000016264)	HMCN2 (ENSODEG00000017140) #12	ENSODEG00000016506 #13	ENSODEG00000016805 #14	ENSODEG00000016150	PRDM12 (ENSODEG00000016282) #15	ENSODEG00000016880 #16	ENSODEG00000016893	QRFP (ENSODEG00000017359) #19	FIBCD1 (ENSODEG00000016757) #20	LAMC3 (ENSODEG00000016310) #21	AIF1L (ENSODEG00000016484) #22	ENSODEG00000016268	ENSODEG00000016298 #23	FAM78A (ENSODEG00000016443) #24	ENSODEG00000016604 #25	PRRC2B (ENSODEG00000016621) #27	POMT1 (ENSODEG00000016799) #28	ENSODEG00000016290 #29	PRRT1B (ENSODEG00000016405) #30	RAPGEF1 (ENSODEG00000015868) #31	ENSODEG00000017667 #32	NTNG2 (ENSODEG00000015897) #34	ENSODEG00000016205	ENSODEG00000016387 #36	ENSODEG00000020330	CFAP77 (ENSODEG00000016491) #37
Guinea pig	MODERN SPECIES	27	TOR1A (ENSCPOG00000009275)	C9orf78 (ENSCPOG00000009285) #7	USP20 (ENSCPOG00000026238) #8	FNBP1 (ENSCPOG00000001166) #9	GPR107 (ENSCPOG00000006007) #10	ENSCPOG00000030593 #11	HMCN2 (ENSCPOG00000013220) #12	ASS1 (ENSCPOG00000024091) #13	FUBP3 (ENSCPOG00000010315) #14	PRDM12 (ENSCPOG00000005901) #15	EXOSC2 (ENSCPOG00000005902) #16	ABL1 (ENSCPOG00000005903) #18	QRFP (ENSCPOG00000031430) #19	FIBCD1 (ENSCPOG00000006219) #20	LAMC3 (ENSCPOG00000004395) #21	AIF1L (ENSCPOG00000014734) #22	ENSCPOG00000003123	FAM78A (ENSCPOG00000033676) #24	PLPP7 (ENSCPOG00000036051) #25	PRRC2B (ENSCPOG00000009890) #27	POMT1 (ENSCPOG00000020217) #28	UCK1 (ENSCPOG00000038192) #29	PRRT1B (ENSCPOG00000022704) #30	RAPGEF1 (ENSCPOG00000009942) #31	MED27 (ENSCPOG00000038756) #32	NTNG2 (ENSCPOG00000024399) #34	SETX (ENSCPOG00000001492) #35	ENSCPOG00000021944 #36	CFAP77 (ENSCPOG00000033078) #37	BARHL1 (ENSCPOG00000025325)	DDX31 (ENSCPOG00000014243)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000042396 #7	USP20 (ENSHGLG00000011412) #8	FNBP1 (ENSHGLG00000011382) #9	GPR107 (ENSHGLG00000018735) #10	NCS1 (ENSHGLG00000014153)	ENSHGLG00000041974 #12	ASS1 (ENSHGLG00000010826) #13	FUBP3 (ENSHGLG00000014381) #14	PRDM12 (ENSHGLG00000013939) #15	EXOSC2 (ENSHGLG00000012834) #16	ENSHGLG00000034423	ENSHGLG00000037525	ABL1 (ENSHGLG00000011775) #18	QRFP (ENSHGLG00000043180) #19	FIBCD1 (ENSHGLG00000010751) #20	ENSHGLG00000043388 #22	NUP214 (ENSHGLG00000012544) #23	FAM78A (ENSHGLG00000049348) #24	PLPP7 (ENSHGLG00000010930) #25	PRRC2B (ENSHGLG00000010565) #27	ENSHGLG00000036647	POMT1 (ENSHGLG00000016861) #28	UCK1 (ENSHGLG00000014736) #29	PRRT1B (ENSHGLG00000014409) #30	RAPGEF1 (ENSHGLG00000012902) #31	MED27 (ENSHGLG00000011262) #32	NTNG2 (ENSHGLG00000012731) #34	SETX (ENSHGLG00000010385) #35	ENSHGLG00000013502 #36	CFAP77 (ENSHGLG00000012393) #37	BARHL1 (ENSHGLG00000011858)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000165005	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00940000163383 #30	ENSGT00940000156235 #31	ENSGT00390000012207 #32	ENSGT00940000153601.a.a #34	ENSGT00940000160918 #35	ENSGT00940000159729 #36	ENSGT00390000014476 #37	ENSGT00940000160428	ENSGT00550000075041
Muroidea	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Murinae	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Mus	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Mus_A	ANCESTRAL SPECIES		ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Mus_C	ANCESTRAL SPECIES		ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Steppe mouse	MODERN SPECIES	2816																Aif1l (ENSMSIG00000013349) #22	Nup214 (ENSMSIG00000013251) #23	Fam78a (ENSMSIG00000013241) #24	Plpp7 (ENSMSIG00000013232) #25	Prrc2b (ENSMSIG00000012975) #27	Pomt1 (ENSMSIG00000012907) #28	Uck1 (ENSMSIG00000012898) #29	ENSMSIG00000012879	Golga2 (ENSMSIG00000012785)	Dnm1 (ENSMSIG00000012014)	ENSMSIG00000011978	Ciz1 (ENSMSIG00000011610)	ENSMSIG00000011594	Lcn2 (ENSMSIG00000011562)	Ptges2 (ENSMSIG00000011545)	ENSMSIG00000011540
spretus	MODERN SPECIES	11	Tor1b (MGP_SPRETEiJ_G0024322)	BC005624 (MGP_SPRETEiJ_G0024323) #7	Usp20 (MGP_SPRETEiJ_G0024324) #8	Fnbp1 (MGP_SPRETEiJ_G0024325) #9	Gpr107 (MGP_SPRETEiJ_G0024326) #10	MGP_SPRETEiJ_G0024327	Hmcn2 (MGP_SPRETEiJ_G0024328) #12	Ass1 (MGP_SPRETEiJ_G0024329) #13	Fubp3 (MGP_SPRETEiJ_G0024330) #14	Prdm12 (MGP_SPRETEiJ_G0024331) #15	Exosc2 (MGP_SPRETEiJ_G0024332) #16	Abl1 (MGP_SPRETEiJ_G0024333) #18	Qrfp (MGP_SPRETEiJ_G0024334) #19	Fibcd1 (MGP_SPRETEiJ_G0024335) #20	Lamc3 (MGP_SPRETEiJ_G0024336) #21	Aif1l (MGP_SPRETEiJ_G0024337) #22	Nup214 (MGP_SPRETEiJ_G0024338) #23	Fam78a (MGP_SPRETEiJ_G0024339) #24	Plpp7 (MGP_SPRETEiJ_G0024340) #25	Prrc2b (MGP_SPRETEiJ_G0024341) #27	Pomt1 (MGP_SPRETEiJ_G0024342) #28	Uck1 (MGP_SPRETEiJ_G0024343) #29	Swi5 (MGP_SPRETEiJ_G0024344)	Golga2 (MGP_SPRETEiJ_G0024345)	Dnm1 (MGP_SPRETEiJ_G0024346)	Ciz1 (MGP_SPRETEiJ_G0024347)	Bbln (MGP_SPRETEiJ_G0024348)	Lcn2 (MGP_SPRETEiJ_G0024349)	Ptges2 (MGP_SPRETEiJ_G0024350)	Slc25a25 (MGP_SPRETEiJ_G0024351)	Naif1 (MGP_SPRETEiJ_G0024352)
Mouse	MODERN SPECIES	11	BC005624 (ENSMUSG00000026851) #7	Usp20 (ENSMUSG00000026854) #8	Fnbp1 (ENSMUSG00000075415) #9	Gpr107 (ENSMUSG00000000194) #10	Ncs1 (ENSMUSG00000062661)	Hmcn2 (ENSMUSG00000055632) #12	Ass1 (ENSMUSG00000076441) #13	Fubp3 (ENSMUSG00000026843) #14	Prdm12 (ENSMUSG00000079466) #15	Exosc2 (ENSMUSG00000039356) #16	Abl1 (ENSMUSG00000026842) #18	Gm56303 (ENSMUSG00000118600)	Qrfp (ENSMUSG00000043102) #19	Fibcd1 (ENSMUSG00000026841) #20	Lamc3 (ENSMUSG00000026840) #21	Aif1l (ENSMUSG00000001864) #22	Nup214 (ENSMUSG00000001855) #23	Fam78a (ENSMUSG00000050592) #24	Plpp7 (ENSMUSG00000051373) #25	Prrc2b (ENSMUSG00000039262) #27	Pomt1 (ENSMUSG00000039254) #28	Uck1 (ENSMUSG00000002550) #29	Swi5 (ENSMUSG00000044627)	Golga2 (ENSMUSG00000002546)	Dnm1 (ENSMUSG00000026825)	Ciz1 (ENSMUSG00000039205)	Bbln (ENSMUSG00000039195)	Lcn2 (ENSMUSG00000026822)	Ptges2 (ENSMUSG00000026820)	Slc25a25 (ENSMUSG00000026819)	Naif1 (ENSMUSG00000039164)
Ryukyu mouse	MODERN SPECIES	11	Tor1a (MGP_CAROLIEiJ_G0023405)	BC005624 (MGP_CAROLIEiJ_G0023406) #7	Usp20 (MGP_CAROLIEiJ_G0023407) #8	Fnbp1 (MGP_CAROLIEiJ_G0023408) #9	Gpr107 (MGP_CAROLIEiJ_G0023409) #10	Ncs1 (MGP_CAROLIEiJ_G0023410)	Hmcn2 (MGP_CAROLIEiJ_G0023411) #12	MGP_CAROLIEiJ_G0023412 #13	Fubp3 (MGP_CAROLIEiJ_G0023413) #14	Prdm12 (MGP_CAROLIEiJ_G0023414) #15	Exosc2 (MGP_CAROLIEiJ_G0023415) #16	Abl1 (MGP_CAROLIEiJ_G0023416) #18	Qrfp (MGP_CAROLIEiJ_G0023417) #19	Fibcd1 (MGP_CAROLIEiJ_G0023418) #20	Lamc3 (MGP_CAROLIEiJ_G0023419) #21	Aif1l (MGP_CAROLIEiJ_G0023420) #22	Nup214 (MGP_CAROLIEiJ_G0023421) #23	Fam78a (MGP_CAROLIEiJ_G0023422) #24	Plpp7 (MGP_CAROLIEiJ_G0023423) #25	Prrc2b (MGP_CAROLIEiJ_G0023424) #27	Pomt1 (MGP_CAROLIEiJ_G0023425) #28	Uck1 (MGP_CAROLIEiJ_G0023426) #29	Swi5 (MGP_CAROLIEiJ_G0023427)	Golga2 (MGP_CAROLIEiJ_G0023428)	Dnm1 (MGP_CAROLIEiJ_G0023429)	Ciz1 (MGP_CAROLIEiJ_G0023430)	Bbln (MGP_CAROLIEiJ_G0023431)	MGP_CAROLIEiJ_G0023432	Ptges2 (MGP_CAROLIEiJ_G0023433)	Slc25a25 (MGP_CAROLIEiJ_G0023434)	Naif1 (MGP_CAROLIEiJ_G0023435)
Shrew mouse	MODERN SPECIES	16	Tor1a (MGP_PahariEiJ_G0024862)	BC005624 (MGP_PahariEiJ_G0024863) #7	Usp20 (MGP_PahariEiJ_G0024864) #8	Fnbp1 (MGP_PahariEiJ_G0024865) #9	Gpr107 (MGP_PahariEiJ_G0024866) #10	Ncs1 (MGP_PahariEiJ_G0024867)	MGP_PahariEiJ_G0024868 #12	Ass1 (MGP_PahariEiJ_G0024869) #13	Fubp3 (MGP_PahariEiJ_G0024870) #14	Prdm12 (MGP_PahariEiJ_G0024871) #15	Exosc2 (MGP_PahariEiJ_G0024872) #16	Abl1 (MGP_PahariEiJ_G0024873) #18	Qrfp (MGP_PahariEiJ_G0024874) #19	Fibcd1 (MGP_PahariEiJ_G0024875) #20	Lamc3 (MGP_PahariEiJ_G0024876) #21	Aif1l (MGP_PahariEiJ_G0024877) #22	Nup214 (MGP_PahariEiJ_G0024878) #23	Fam78a (MGP_PahariEiJ_G0024879) #24	Plpp7 (MGP_PahariEiJ_G0024880) #25	Prrc2b (MGP_PahariEiJ_G0024881) #27	Pomt1 (MGP_PahariEiJ_G0024882) #28	Uck1 (MGP_PahariEiJ_G0024883) #29	MGP_PahariEiJ_G0024884	Golga2 (MGP_PahariEiJ_G0024885)	Dnm1 (MGP_PahariEiJ_G0024886)	Ciz1 (MGP_PahariEiJ_G0024887)	Bbln (MGP_PahariEiJ_G0024888)	MGP_PahariEiJ_G0024889	Ptges2 (MGP_PahariEiJ_G0024890)	Slc25a25 (MGP_PahariEiJ_G0024891)	Naif1 (MGP_PahariEiJ_G0024892)
Rat	MODERN SPECIES	13	C3h9orf78 (ENSRNOG00000007532) #7	Usp20 (ENSRNOG00000007710) #8	Fnbp1 (ENSRNOG00000008258) #9	Gpr107 (ENSRNOG00000023589) #10	Ncs1 (ENSRNOG00000064701) #11	LOC103691761 (ENSRNOG00000062268)	Hmcn2 (ENSRNOG00000064166) #12	Ass1 (ENSRNOG00000008837) #13	Fubp3 (ENSRNOG00000009139) #14	Prdm12 (ENSRNOG00000009218) #15	Exosc2 (ENSRNOG00000009245) #16	Abl1 (ENSRNOG00000047356) #18	Qrfp (ENSRNOG00000046473) #19	Fibcd1 (ENSRNOG00000009735) #20	Lamc3 (ENSRNOG00000059507) #21	Aif1l (ENSRNOG00000009951) #22	Nup214 (ENSRNOG00000023393) #23	Fam78a (ENSRNOG00000023352) #24	Plpp7 (ENSRNOG00000010068) #25	Prrc2b (ENSRNOG00000010217) #27	Pomt1 (ENSRNOG00000010477) #28	Uck1 (ENSRNOG00000011467) #29	Swi5 (ENSRNOG00000022860)	Golga2 (ENSRNOG00000011884)	Dnm1 (ENSRNOG00000033835)	Ciz1 (ENSRNOG00000013442)	Bbln (ENSRNOG00000022681)	Lcn2 (ENSRNOG00000013973)	Ptges2 (ENSRNOG00000014050)	Slc25a25 (ENSRNOG00000014338)	Naif1 (ENSRNOG00000050204)
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Golden Hamster	MODERN SPECIES	906																Aif1l (ENSMAUG00000008893) #22	Nup214 (ENSMAUG00000013364) #23	Fam78a (ENSMAUG00000009887) #24	Plpp7 (ENSMAUG00000002309) #25	Prrc2b (ENSMAUG00000010542) #27	Pomt1 (ENSMAUG00000014110) #28	Uck1 (ENSMAUG00000005913) #29	Swi5 (ENSMAUG00000000780)	Golga2 (ENSMAUG00000019551)	Dnm1 (ENSMAUG00000007517)	ENSMAUG00000005759	ENSMAUG00000015443	Bbln (ENSMAUG00000008053)	ENSMAUG00000013260	Ptges2 (ENSMAUG00000017701)	Slc25a25 (ENSMAUG00000016681)
Chinese hamster chok1gshd	MODERN SPECIES	188	Tor1a (ENSCGRG00001024352)	BC005624 (ENSCGRG00001024600) #7	Usp20 (ENSCGRG00001007813) #8	Fnbp1 (ENSCGRG00001023502) #9	Gpr107 (ENSCGRG00001021890) #10	Ncs1 (ENSCGRG00001023742)	Hmcn2 (ENSCGRG00001013838) #12	Ass1 (ENSCGRG00001024543) #13	Fubp3 (ENSCGRG00001011076) #14	Prdm12 (ENSCGRG00001015005) #15	Exosc2 (ENSCGRG00001013981) #16	Abl1 (ENSCGRG00001024699) #18	Qrfp (ENSCGRG00001002494) #19	Fibcd1 (ENSCGRG00001015213) #20	Lamc3 (ENSCGRG00001012684) #21	Aif1l (ENSCGRG00001005912) #22	Nup214 (ENSCGRG00001002215) #23	Fam78a (ENSCGRG00001004596) #24	Plpp7 (ENSCGRG00001007465) #25	Prrc2b (ENSCGRG00001013428) #27	Pomt1 (ENSCGRG00001019065) #28	ENSCGRG00001004922 #29	Swi5 (ENSCGRG00001005842)	Golga2 (ENSCGRG00001024588)	Dnm1 (ENSCGRG00001011557)	Ciz1 (ENSCGRG00001014777)	Bbln (ENSCGRG00001011837)	Lcn2 (ENSCGRG00001012253)	Ptges2 (ENSCGRG00001013052)	Slc25a25 (ENSCGRG00001023236)	Naif1 (ENSCGRG00001017489)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00950000182888.a.a.a.j.b	ENSGT00390000009787 #7	ENSGT00940000158829 #8	ENSGT00950000183047.d #9	ENSGT00940000160451 #10	ENSGT00940000154645.B	ENSGT00940000162328 #12	ENSGT00390000004524 #13	ENSGT00940000156744 #14	ENSGT00940000161616 #15	ENSGT00940000153596.B #16	ENSGT00940000153838.a #18	ENSGT00390000015756 #19	ENSGT00940000155976.a #20	ENSGT00940000161559 #21	ENSGT00390000013846.a.a #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147 #25	ENSGT00950000183161.a.b #27	ENSGT00940000158049 #28	ENSGT01020000230412.A.c.a #29	ENSGT00390000009349	ENSGT00530000062932.d	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT01050000244868.b.a	ENSGT00390000000224	ENSGT00940000157207	ENSGT00450000040324.b
Northern American deer mouse	MODERN SPECIES	17	BC005624 (ENSPEMG00000013405) #7	Usp20 (ENSPEMG00000017617) #8	Fnbp1 (ENSPEMG00000005382) #9	Gpr107 (ENSPEMG00000011641) #10	Ncs1 (ENSPEMG00000009081)	Hmcn2 (ENSPEMG00000011093) #12	Ass1 (ENSPEMG00000017238) #13	Fubp3 (ENSPEMG00000019195) #14	Prdm12 (ENSPEMG00000009969) #15	Exosc2 (ENSPEMG00000006345) #16	ENSPEMG00000001904	Abl1 (ENSPEMG00000024677) #18	Qrfp (ENSPEMG00000009404) #19	Fibcd1 (ENSPEMG00000028513) #20	Lamc3 (ENSPEMG00000004694) #21	Aif1l (ENSPEMG00000006941) #22	Nup214 (ENSPEMG00000009581) #23	Fam78a (ENSPEMG00000025215) #24	Plpp7 (ENSPEMG00000029234) #25	Prrc2b (ENSPEMG00000006196) #27	Pomt1 (ENSPEMG00000011414) #28	Uck1 (ENSPEMG00000008608) #29	Swi5 (ENSPEMG00000001958)	Golga2 (ENSPEMG00000010366)	Dnm1 (ENSPEMG00000012357)	Ciz1 (ENSPEMG00000002769)	Bbln (ENSPEMG00000024928)	Lcn2 (ENSPEMG00000007881)	Ptges2 (ENSPEMG00000014378)	Slc25a25 (ENSPEMG00000009683)	Naif1 (ENSPEMG00000029493)
Prairie vole	MODERN SPECIES	12	Usp20 (ENSMOCG00000007792) #8	ENSMOCG00000018660	Fnbp1 (ENSMOCG00000015891) #9	Gpr107 (ENSMOCG00000004618) #10	Ncs1 (ENSMOCG00000019199)	Hmcn2 (ENSMOCG00000021220) #12	ENSMOCG00000014563 #13	ENSMOCG00000001087	Fubp3 (ENSMOCG00000005635) #14	Prdm12 (ENSMOCG00000021026) #15	Exosc2 (ENSMOCG00000008262) #16	ENSMOCG00000006542 #18	Qrfp (ENSMOCG00000022423) #19	Fibcd1 (ENSMOCG00000022095) #20	Lamc3 (ENSMOCG00000021265) #21	Aif1l (ENSMOCG00000017527) #22	Nup214 (ENSMOCG00000022169) #23	Fam78a (ENSMOCG00000016168) #24	Plpp7 (ENSMOCG00000014865) #25	Prrc2b (ENSMOCG00000007990) #27	Pomt1 (ENSMOCG00000022108) #28	Uck1 (ENSMOCG00000021975) #29	Swi5 (ENSMOCG00000016692)	Golga2 (ENSMOCG00000004584)	Dnm1 (ENSMOCG00000012359)	ENSMOCG00000009560	Bbln (ENSMOCG00000006322)	Lcn2 (ENSMOCG00000017240)	Ptges2 (ENSMOCG00000011339)	Slc25a25 (ENSMOCG00000015194)	Naif1 (ENSMOCG00000005018)
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	513	Tor1a (ENSNGAG00000008009)	BC005624 (ENSNGAG00000004959) #7	ENSNGAG00000007690 #8	Fnbp1 (ENSNGAG00000012937) #9	Gpr107 (ENSNGAG00000011379) #10	Ncs1 (ENSNGAG00000014453)	Hmcn2 (ENSNGAG00000000330) #12	Ass1 (ENSNGAG00000001086) #13	Fubp3 (ENSNGAG00000016562) #14	Prdm12 (ENSNGAG00000018480) #15	Exosc2 (ENSNGAG00000019383) #16	ENSNGAG00000015019	Qrfp (ENSNGAG00000014842) #19	Fibcd1 (ENSNGAG00000012641) #20	Lamc3 (ENSNGAG00000014328) #21	ENSNGAG00000008685 #22	ENSNGAG00000003978	ENSNGAG00000000413	Fam78a (ENSNGAG00000015817) #24	Plpp7 (ENSNGAG00000014073) #25	Prrc2b (ENSNGAG00000000491) #27	Pomt1 (ENSNGAG00000008179) #28	Uck1 (ENSNGAG00000016330) #29	ENSNGAG00000010814	Golga2 (ENSNGAG00000001473)	Dnm1 (ENSNGAG00000005939)	ENSNGAG00000016410	Bbln (ENSNGAG00000009999)	ENSNGAG00000016092	Ptges2 (ENSNGAG00000019435)	Slc25a25 (ENSNGAG00000002312)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1044																ENSNGAG00000015072 #22	Alas2 (ENSNGAG00000014787)	Apex2 (ENSNGAG00000013576)	Pfkfb1 (ENSNGAG00000012590)	ENSNGAG00000011855	Maged2 (ENSNGAG00000010942)	Gnl3l (ENSNGAG00000005965)	Fgd1 (ENSNGAG00000000668)	Tsr2 (ENSNGAG00000021351)
Lesser Egyptian jerboa	MODERN SPECIES	216	ENSJJAG00000018480 #8	Fnbp1 (ENSJJAG00000014760) #9	Gpr107 (ENSJJAG00000011368) #10	ENSJJAG00000006586 #11	Hmcn2 (ENSJJAG00000015957) #12	Ass1 (ENSJJAG00000012217) #13	ENSJJAG00000011740	Fubp3 (ENSJJAG00000009992) #14	Prdm12 (ENSJJAG00000005424) #15	Exosc2 (ENSJJAG00000003188) #16	ENSJJAG00000002376	ENSJJAG00000001721	Qrfp (ENSJJAG00000000766) #19	Fibcd1 (ENSJJAG00000000435) #20	Lamc3 (ENSJJAG00000024108) #21	Aif1l (ENSJJAG00000016566) #22
Kangaroo rat	MODERN SPECIES	374	Tor1a (ENSDORG00000000780)	BC005624 (ENSDORG00000000781) #7	Usp20 (ENSDORG00000000782) #8	Fnbp1 (ENSDORG00000000783) #9	Gpr107 (ENSDORG00000006286) #10	ENSDORG00000013807 #11	Hmcn2 (ENSDORG00000027158) #12	Ass1 (ENSDORG00000010865) #13	ENSDORG00000030247 #14	ENSDORG00000027073	Exosc2 (ENSDORG00000009238) #16	ENSDORG00000026471	Qrfp (ENSDORG00000006119) #19	Fibcd1 (ENSDORG00000001517) #20	Lamc3 (ENSDORG00000014599) #21	Aif1l (ENSDORG00000003641) #22	ENSDORG00000028083	ENSDORG00000027131 #23	Fam78a (ENSDORG00000027116) #24	Plpp7 (ENSDORG00000007637) #25	Prrc2b (ENSDORG00000005945) #27	Pomt1 (ENSDORG00000014415) #28	Uck1 (ENSDORG00000025358) #29	Rapgef1 (ENSDORG00000003580) #31	Med27 (ENSDORG00000014279) #32	Ntng2 (ENSDORG00000015371) #34	ENSDORG00000030223	Cfap77 (ENSDORG00000008723) #37	ENSDORG00000025192	Ddx31 (ENSDORG00000005071)	Gtf3c4 (ENSDORG00000005077)