Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000160376	ENSGT00390000011639 #8	ENSGT00940000156457 #10	ENSGT00390000001930 #11	ENSGT00510000049875 #12	ENSGT00390000002615 #13	ENSGT00390000008374 #14	ENSGT00940000159139 #15	ENSGT00940000156954 #16	ENSGT00940000159921 #17	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #19	ENSGT00940000159914 #20	ENSGT00390000007552.f #21	ENSGT00940000154902.bb.a ##22	ENSGT00940000154902.bb.b #22	ENSGT00940000155073.b #23	ENSGT00950000183045.A.a.a #24	ENSGT00390000013802 #25	ENSGT00530000063866 #26	ENSGT00730000111073 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a #28	ENSGT00940000158650 #29	ENSGT00940000159102 #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.b.b #33	ENSGT00520000061410 #34	ENSGT00940000155807.a #35	ENSGT00390000010089.e.b #36	ENSGT00530000063626.a #37
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000160376	ENSGT00390000011639 #8	ENSGT00940000156457 #10	ENSGT00390000001930 #11	ENSGT00510000049875 #12	ENSGT00390000002615 #13	ENSGT00390000008374 #14	ENSGT00940000159139 #15	ENSGT00940000156954 #16	ENSGT00940000159921 #17	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #19	ENSGT00940000159914 #20	ENSGT00390000007552.f #21	ENSGT00940000154902.bb.a ##22	ENSGT00940000154902.bb.b #22	ENSGT00940000155073.b #23	ENSGT00950000183045.A.a.a #24	ENSGT00390000013802 #25	ENSGT00530000063866 #26	ENSGT00730000111073 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a #28	ENSGT00940000158650 #29	ENSGT00940000159102 #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.b.b #33	ENSGT00520000061410 #34	ENSGT00940000155807.a #35	ENSGT00390000010089.e.b #36	ENSGT00530000063626.a #37
Bos	ANCESTRAL SPECIES	11	ENSGT00940000161486	ENSGT00940000161805.p.b	ENSGT00940000160376	ENSGT00390000011639 #8	ENSGT00940000156457 #10	ENSGT00390000001930 #11	ENSGT00510000049875 #12	ENSGT00390000002615.m #13	ENSGT00390000008374 #14	ENSGT00940000159139 #15	ENSGT00940000156954 #16	ENSGT00940000159921 #17	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #19	ENSGT00940000159914 #20	ENSGT00940000154902.bb.b #22	ENSGT00940000155073.b #23	ENSGT00950000183045.A.a.a #24	ENSGT00390000013802 #25	ENSGT00530000063866 #26	ENSGT00730000111073 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a #28	ENSGT00940000158650 #29	ENSGT00940000159102 #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.b.b #33	ENSGT00520000061410 #34	ENSGT00940000155807.a #35	ENSGT00390000010089.e.b #36	ENSGT00530000063626.a #37
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000160376	ENSGT01100000263497.B #7	ENSGT00390000011639 #8	ENSGT00940000162696 #9	ENSGT00940000156457 #10	ENSGT00390000001930 #11	ENSGT00510000049875 #12	ENSGT00390000002615.m #13	ENSGT00390000008374 #14	ENSGT00940000159139 #15	ENSGT00940000156954 #16	ENSGT00940000159921 #17	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #19	ENSGT00940000159914 #20	ENSGT00940000154902.bb.b #22	ENSGT00940000155073.b #23	ENSGT00950000183045.A.a.a #24	ENSGT00390000013802 #25	ENSGT00530000063866 #26	ENSGT00730000111073 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a #28	ENSGT00940000158650 #29	ENSGT00940000159102 #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.b.b #33	ENSGT00520000061410 #34	ENSGT00940000155807.a #35	ENSGT00390000010089.e.b #36	ENSGT00530000063626.a #37
Cow	MODERN SPECIES	21	GNG3 (ENSBTAG00000002508) #7	BSCL2 (ENSBTAG00000002503) #8	LRRN4CL (ENSBTAG00000010484) #9	UBXN1 (ENSBTAG00000010481) #10	UQCC3 (ENSBTAG00000010470) #11	CSKMT (ENSBTAG00000022293) #12	C29H11orf98 (ENSBTAG00000010465) #13	INTS5 (ENSBTAG00000010455) #14	GANAB (ENSBTAG00000016956) #15	B3GAT3 (ENSBTAG00000016950) #16	ROM1 (ENSBTAG00000001188) #17	EML3 (ENSBTAG00000011872) #18	MTA2 (ENSBTAG00000011865) #19	TUT1 (ENSBTAG00000011846) #20	EEF1G (ENSBTAG00000011843) #21	AHNAK (ENSBTAG00000013468) #22	SCGB1A1 (ENSBTAG00000032918) #23	ASRGL1 (ENSBTAG00000006910) #24	SCGB2A2 (ENSBTAG00000015940) #25	SCGB1D (ENSBTAG00000040070) #26	INCENP (ENSBTAG00000050061) #27	FTH1 (ENSBTAG00000011184) #28	BEST1 (ENSBTAG00000011186) #29	RAB3IL1 (ENSBTAG00000015745) #30	FADS3 (ENSBTAG00000015511) #31	FADS2 (ENSBTAG00000015505) #32	FADS1 (ENSBTAG00000022294) #33	ENSBTAG00000053898 #34	FEN1 (ENSBTAG00000000064) #35	TMEM258 (ENSBTAG00000032557) #36	MYRF (ENSBTAG00000006990) #37
Hybrid Bos Indicus	MODERN SPECIES	21	HNRNPUL2 (ENSBIXG00005006206)	BSCL2 (ENSBIXG00005011232) #8	GNG3 (ENSBIXG00005011192) #7	LRRN4CL (ENSBIXG00005011174) #9	UBXN1 (ENSBIXG00005011165) #10	UQCC3 (ENSBIXG00005011106) #11	LBHD1 (ENSBIXG00005011086)	CSKMT (ENSBIXG00005010973) #12	INTS5 (ENSBIXG00005000974) #14	GANAB (ENSBIXG00005010906) #15	B3GAT3 (ENSBIXG00005000941) #16	ROM1 (ENSBIXG00005010720) #17	EML3 (ENSBIXG00005010701) #18	MTA2 (ENSBIXG00005000637) #19	TUT1 (ENSBIXG00005000659) #20	AHNAK (ENSBIXG00005000904) #22	ENSBIXG00005000712 #23	ASRGL1 (ENSBIXG00005000896) #24	ENSBIXG00005010523 #25	ENSBIXG00005010508 #26	INCENP (ENSBIXG00005010485) #27	ENSBIXG00005000888 #28	BEST1 (ENSBIXG00005010422) #29	ENSBIXG00005010391 #30	FADS3 (ENSBIXG00005000842) #31	ENSBIXG00005010140 #32	FADS1 (ENSBIXG00005010078) #33	FEN1 (ENSBIXG00005010025) #35	TMEM258 (ENSBIXG00005010011) #36	MYRF (ENSBIXG00005000732) #37	DAGLA (ENSBIXG00005009918)
Bos_a	ANCESTRAL SPECIES	50	ENSGT00390000005644	ENSGT01000000214430.b	ENSGT01050000244898.a.a.a.b	ENSGT00940000165347	ENSGT00940000158840	ENSGT00940000161278	ENSGT00390000007109	ENSGT00550000074944	ENSGT00390000017010	ENSGT00550000074873.bb.b	ENSGT00390000013920	ENSGT00390000017601	ENSGT00940000156823.e	ENSGT00940000160640	ENSGT00390000007552.f #21	ENSGT00940000154902.bb.b #22	ENSGT00940000154902.bb.a ##22	ENSGT00940000162423	ENSGT00950000182991.B.y	ENSGT01000000214430.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.a
Wild yak	MODERN SPECIES	1714	GNG3 (ENSBMUG00000023415) #7	BSCL2 (ENSBMUG00000023406) #8	UBXN1 (ENSBMUG00000023388) #10	UQCC3 (ENSBMUG00000023373) #11	CSKMT (ENSBMUG00000023360) #12	ENSBMUG00000023348 #13	INTS5 (ENSBMUG00000023343) #14	GANAB (ENSBMUG00000023315) #15	B3GAT3 (ENSBMUG00000023252) #16	ROM1 (ENSBMUG00000023222) #17	EML3 (ENSBMUG00000023212) #18	ENSBMUG00000023148 #19	ENSBMUG00000023138 #19	TUT1 (ENSBMUG00000023128) #20	EEF1G (ENSBMUG00000023113) #21	ENSBMUG00000023096 #22	ENSBMUG00000023076 ##22
American bison	MODERN SPECIES	3248	BSCL2 (ENSBBBG00000005208) #8	LRRN4CL (ENSBBBG00000019428) #9	UBXN1 (ENSBBBG00000009187) #10	UQCC3 (ENSBBBG00000019369) #11	LBHD1 (ENSBBBG00000019358)	CSKMT (ENSBBBG00000007511) #12	INTS5 (ENSBBBG00000005016) #14	GANAB (ENSBBBG00000019296) #15	B3GAT3 (ENSBBBG00000004913) #16	ROM1 (ENSBBBG00000019099) #17	EML3 (ENSBBBG00000019090) #18	MTA2 (ENSBBBG00000019072) #19	TUT1 (ENSBBBG00000019032) #20	EEF1G (ENSBBBG00000019015) #21	ENSBBBG00000018998 ##22	ENSBBBG00000004835 #22	ENSBBBG00000018961 #23	ASRGL1 (ENSBBBG00000004812) #24	ENSBBBG00000018946 #25	ENSBBBG00000004805 #26	INCENP (ENSBBBG00000018936) #27	ENSBBBG00000018919 ##28	BEST1 (ENSBBBG00000004787) #29	RAB3IL1 (ENSBBBG00000018902) #30	FADS3 (ENSBBBG00000018899) #31	ENSBBBG00000004767 #32	FADS1 (ENSBBBG00000018803) #33	FEN1 (ENSBBBG00000008945) #35	ENSBBBG00000004696 #36	ENSBBBG00000009148 #37	DAGLA (ENSBBBG00000004679)
Caprinae	ANCESTRAL SPECIES	20	ENSGT01100000263497.B #7	ENSGT00390000011639 #8	ENSGT00940000162696 #9	ENSGT00940000156457 #10	ENSGT00390000001930 #11	ENSGT00510000049875 #12	ENSGT00390000002615 #13	ENSGT00390000008374 #14	ENSGT00940000159139 #15	ENSGT00940000156954 #16	ENSGT00940000159921 #17	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #19	ENSGT00940000159914 #20	ENSGT00390000007552.f #21	ENSGT00940000154902.bb.b #22	ENSGT00940000154902.bb.a ##22	ENSGT00940000155073.b #23	ENSGT00950000183045.A.a.a #24	ENSGT00390000013802 #25	ENSGT00530000063866 #26	ENSGT00730000111073 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a #28	ENSGT00940000158650 #29	ENSGT00940000159102 #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.b.b #33	ENSGT00520000061410 #34	ENSGT00940000155807.a #35	ENSGT00390000010089.e.b #36
Goat	MODERN SPECIES	21	GNG3 (ENSCHIG00000015824) #7	BSCL2 (ENSCHIG00000026480) #8	LRRN4CL (ENSCHIG00000009031) #9	UBXN1 (ENSCHIG00000006820) #10	UQCC3 (ENSCHIG00000018953) #11	CSKMT (ENSCHIG00000011409) #12	C11orf98 (ENSCHIG00000022514) #13	INTS5 (ENSCHIG00000013982) #14	GANAB (ENSCHIG00000022447) #15	ENSCHIG00000016332 #16	ROM1 (ENSCHIG00000010262) #17	EML3 (ENSCHIG00000021585) #18	MTA2 (ENSCHIG00000015501) #19	TUT1 (ENSCHIG00000006765) #20	ENSCHIG00000022487 #21	AHNAK (ENSCHIG00000015249) #22	ASRGL1 (ENSCHIG00000024873) #24	ENSCHIG00000018172 #25	ENSCHIG00000013354 #26	INCENP (ENSCHIG00000023449) #27	FTH1 (ENSCHIG00000018949) ##28	BEST1 (ENSCHIG00000005599) #29	RAB3IL1 (ENSCHIG00000018161) #30	FADS3 (ENSCHIG00000026956) #31	ENSCHIG00000015460 #32	FADS1 (ENSCHIG00000022314) #33	ENSCHIG00000013437 #34	FEN1 (ENSCHIG00000009155) #35	ENSCHIG00000018241 #36	MYRF (ENSCHIG00000003036) #37	DAGLA (ENSCHIG00000020106)