Neopterygii	ANCESTRAL SPECIES	197											ENSGT00930000151050	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907 #23	ENSGT00620000089226	ENSGT00940000154394.b.a.b ##24	ENSGT00940000154394.b.a.a.a.a.b ##24	ENSGT00940000154842.a.a	ENSGT00950000182888.b	ENSGT00940000166999.A	ENSGT01010000223148	ENSGT00910000144273	ENSGT00390000006843	ENSGT00950000186109	ENSGT00940000161928	ENSGT00940000160109	ENSGT01100000263580	ENSGT00940000158795
Osteoglossocephalai	ANCESTRAL SPECIES	49	ENSGT00940000156611	ENSGT00390000000642	ENSGT00940000163762.b	ENSGT00940000155945.i.a	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000165669	ENSGT00390000009566	ENSGT00940000153772.B	ENSGT00940000158501	ENSGT00390000016384	ENSGT00940000166116	ENSGT00940000172233	ENSGT00940000157194	ENSGT00940000157936
Clupeocephala	ANCESTRAL SPECIES	195	ENSGT00940000164541	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000160616	ENSGT00940000155946.c.b	ENSGT00930000151016 #11	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000165669	ENSGT00390000009566	ENSGT00940000158501.d.a	ENSGT00390000016384.l.a	ENSGT00940000166116
Otomorpha	ANCESTRAL SPECIES	193	ENSGT00940000157955.d.a	ENSGT00940000160616	ENSGT00940000154079.b.b	ENSGT00940000155946.c.b	ENSGT00930000151016 #11	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b
Otophysi	ANCESTRAL SPECIES	100	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT00930000151050	ENSGT00390000008371.b #14	ENSGT00900000141021.b.a.d #16	ENSGT00390000011500 #17	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00620000089226	ENSGT00940000164907.b.a ##23	ENSGT00940000155151.a.a.a ##22	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00390000020276.mb.b	ENSGT00940000165492.a.a #25	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b #26	ENSGT00940000158865 #27	ENSGT00940000158797	ENSGT00390000006980	ENSGT00530000064194 #29	ENSGT00940000153294 #30	ENSGT00390000004339 #31	ENSGT00390000009787 #32	ENSGT00940000158829 #33
Cyprinoidei	ANCESTRAL SPECIES	19	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT00930000151050	ENSGT00390000008371.b #14	ENSGT00900000141021.b.a.d #16	ENSGT00390000011500 #17	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00620000089226	ENSGT00940000164907.b.a ##23	ENSGT00940000155151.a.a.a ##22	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.b.b.c.b ##24	ENSGT00940000154394.b.a.a.a.b.a.b ##24	ENSGT00390000020276.mb.a	ENSGT00390000020276.mb.b	ENSGT00940000165492.a.a #25	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b #26	ENSGT00940000158865 #27	ENSGT00950000182857.a.b	ENSGT00940000158797	ENSGT00390000006980	ENSGT00530000064194 #29	ENSGT00940000153294 #30
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES		ENSGT00940000164626.b.b.c.a.f #7	ENSGT00940000155882.a.b.b.e #8	ENSGT00940000155567.w.a #9	ENSGT00390000001195.a.b.a #10	ENSGT00930000151016.y #11	ENSGT00940000154645.B.i.b #12	ENSGT00940000160451.b #13	ENSGT00930000151050.b	ENSGT00390000008371.b.c #14	ENSGT00900000141021.b.a.d.c #16	ENSGT00390000011500.f #17	ENSGT01060000248556.A.a.a.a.b.a.c #18	ENSGT00930000151044.a #19	ENSGT00390000006922.d #20	ENSGT00940000164386.f #21	ENSGT00940000155151.a.a.b.a #22	ENSGT00940000164907.b.b.b.b #23	ENSGT00940000154394.b.a.a.b.b.c.b ##24	ENSGT00940000165492.a.a.c.a #25	ENSGT00940000154821.a.a.a	ENSGT00940000154886.a.b.k #26	ENSGT00940000158865.o #27	ENSGT00950000182857.a.b	ENSGT00940000158797.v	ENSGT00390000006980.c	ENSGT00530000064194.g #29	ENSGT00940000153294.h #30	ENSGT00390000004339.s #31	ENSGT00390000009787.cb #32	ENSGT00940000158829.a #33	ENSGT00390000011980.b.b.a #34
Goldfish	MODERN SPECIES	44	ENSCARG00000013314 #7	hspb15 (ENSCARG00000014158) #8	dab2 (ENSCARG00000014173) #9	gas1b (ENSCARG00000014190) #10	fbxw2 (ENSCARG00000014196) #11	ncs1a (ENSCARG00000014199) #12	gpr107 (ENSCARG00000014211) #13	ntmt1 (ENSCARG00000014228) #14	ENSCARG00000014240 #15	ier5l (ENSCARG00000014243) #16	ptpa (ENSCARG00000014256) #17	crata (ENSCARG00000014355) #18	lrsam1 (ENSCARG00000015688) #19	rpl12 (ENSCARG00000000170) #20	pole3 (ENSCARG00000000215) #21	ccn1l1 (ENSCARG00000000221) #22	lmo4a (ENSCARG00000000232) #23	ENSCARG00000000244 #24	ENSCARG00000000301 #25	ENSCARG00000000336 #26	prkaa1 (ENSCARG00000000442) #27	ENSCARG00000000581 #28	surf1 (ENSCARG00000000586) #29	RPL7A (ENSCARG00000000600) #30	med22 (ENSCARG00000000632) #31	zgc:103692 (ENSCARG00000000655) #32	usp20 (ENSCARG00000000727) #33	ptges (ENSCARG00000000808) #34	garnl3 (ENSCARG00000000939) #35	ENSCARG00000001266 #36	ENSCARG00000001269 #37
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000164626.b.b.c.a.f #7	ENSGT00940000155882.a.b.b.e #8	ENSGT00940000155567.w.a #9	ENSGT00390000001195.a.b.a #10	ENSGT00930000151016.y #11	ENSGT00940000163010.u.b	ENSGT00940000160451.b #13	ENSGT00930000151050.b	ENSGT00390000008371.b.c #14	ENSGT00900000141021.b.a.d.c #16	ENSGT00390000011500.f #17	ENSGT01060000248556.A.a.a.a.b.a.c #18	ENSGT00930000151044.a #19	ENSGT00390000006922.d #20	ENSGT00940000164386.f #21	ENSGT00940000155151.a.a.b.a #22	ENSGT00940000164907.b.b.b.b #23	ENSGT00940000154394.b.a.a.b.b.c.a ##24	ENSGT00940000165492.a.a.c.a #25	ENSGT00940000154821.a.a.a	ENSGT00940000154886.a.b.k #26	ENSGT00940000158865.o #27	ENSGT00950000182857.a.b	ENSGT00940000158797.v	ENSGT00390000006980.c	ENSGT00530000064194.g #29	ENSGT00390000004339.s #31	ENSGT00390000009787.cb #32	ENSGT00940000158829.a #33	ENSGT00390000011980.b.b.a #34	ENSGT00940000159362.g #35
Common carp reference	MODERN SPECIES	7	tescb (ENSCCRG00000071303)	m17 (ENSCCRG00000013882)	ENSCCRG00000013876	ENSCCRG00000072823	ENSCCRG00000056047 #7	dab2 (ENSCCRG00000026586) #9	fbxw2 (ENSCCRG00000053560) #11	ENSCCRG00000071330	gpr107 (ENSCCRG00000043862) #13	ntmt1 (ENSCCRG00000043894) #14	ptpa (ENSCCRG00000031445) #17	crata (ENSCCRG00000031927) #18	lrsam1 (ENSCCRG00000034301) #19	rpl12 (ENSCCRG00000071587) #20	pole3 (ENSCCRG00000080860) #21	ccn1l1 (ENSCCRG00000035740) #22	lmo4a (ENSCCRG00000075174) #23	ENSCCRG00000054308 ##24	ENSCCRG00000031181 ##25	ENSCCRG00000052661 #25	ENSCCRG00000055438	ENSCCRG00000031194 #26	prkaa1 (ENSCCRG00000078593) #27	kyat1 (ENSCCRG00000062125)	RPL7A (ENSCCRG00000034022) #30	surf1 (ENSCCRG00000081884) #29	med22 (ENSCCRG00000074301) #31	zgc:103692 (ENSCCRG00000034113) #32	usp20 (ENSCCRG00000033705) #33	ptges (ENSCCRG00000060524) #34	garnl3 (ENSCCRG00000044660) #35
Golden-line barbel	MODERN SPECIES	91	ENSSGRG00000015499 #7	hspb15 (ENSSGRG00000015504) #8	dab2 (ENSSGRG00000015508) #9	ENSSGRG00000015528	gas1b (ENSSGRG00000015530) #10	fbxw2 (ENSSGRG00000015532) #11	gpr107 (ENSSGRG00000015537) #13	ndor1 (ENSSGRG00000015544)	ntmt1 (ENSSGRG00000015561) #14	ier5l (ENSSGRG00000015565) #16	ptpa (ENSSGRG00000015567) #17	crata (ENSSGRG00000015586) #18	lrsam1 (ENSSGRG00000016091) #19	rpl12 (ENSSGRG00000016092) #20	pole3 (ENSSGRG00000016141) #21	ccn1l1 (ENSSGRG00000016144) #22	lmo4a (ENSSGRG00000016145) #23	zgc:55461 (ENSSGRG00000016148) ##24	ENSSGRG00000016154 #25	ENSSGRG00000016195	ENSSGRG00000016196 #26	prkaa1 (ENSSGRG00000016198) #27	ifitm1 (ENSSGRG00000016208)	kyat1 (ENSSGRG00000016230)	surf6 (ENSSGRG00000016898)	surf1 (ENSSGRG00000016901) #29	ENSSGRG00000016903	med22 (ENSSGRG00000016907) #31	zgc:103692 (ENSSGRG00000016908) #32	usp20 (ENSSGRG00000016911) #33	ptges (ENSSGRG00000017233) #34
Cyprininae	ANCESTRAL SPECIES	48	ENSGT00940000155567.w.b ##9	ENSGT00940000159777	ENSGT00390000001195.a.b.b ##10	ENSGT00930000151016.z ##11	ENSGT00940000154645.B.i.a ##12	ENSGT00940000160451.a ##13	ENSGT00930000151050.a	ENSGT00390000008371.b.d ##14	ENSGT00900000141021.b.a.d.d ##16	ENSGT00390000011500.e ##17	ENSGT01060000248556.A.a.a.a.b.a.d ##18	ENSGT00530000064286.n	ENSGT00930000151044.b ##19	ENSGT00390000006922.c ##20	ENSGT00940000164386.e ##21	ENSGT00940000155151.a.a.b.b ##22	ENSGT00940000164907.b.b.b.a ##23	ENSGT00940000154394.b.a.a.a.b.a.b ##24	ENSGT00390000020276.mb.a	ENSGT00940000165492.a.a.d ##25	ENSGT00940000165492.a.a.c.b ##25	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a.b	ENSGT00940000154886.a.b.l ##26	ENSGT00940000158865.p ##27	ENSGT00940000158797.u	ENSGT00390000006980.d	ENSGT00530000064194.h ##29	ENSGT00940000153294.g ##30	ENSGT00390000004339.t ##31	ENSGT00390000009787.bb ##32
Cyprininae_a	ANCESTRAL SPECIES	22	ENSGT00940000155567.w.b ##9	ENSGT00940000159777	ENSGT00390000001195.a.b.b ##10	ENSGT00930000151016.z ##11	ENSGT00940000154645.B.i.a ##12	ENSGT00940000160451.a ##13	ENSGT00930000151050.a	ENSGT00390000008371.b.d ##14	ENSGT00900000141021.b.a.d.d ##16	ENSGT00390000011500.e ##17	ENSGT01060000248556.A.a.a.a.b.a.d ##18	ENSGT00530000064286.n	ENSGT00930000151044.b ##19	ENSGT00390000006922.c ##20	ENSGT00940000164386.e ##21	ENSGT00940000155151.a.a.b.b ##22	ENSGT00940000164907.b.b.b.a ##23	ENSGT00940000154394.b.a.a.b.b.c.b ##24	ENSGT00940000165492.a.a.c.b ##25	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a.b	ENSGT00940000154886.a.b.l ##26	ENSGT00940000158865.p ##27	ENSGT00940000158797.u	ENSGT00390000006980.d	ENSGT00530000064194.h ##29	ENSGT00940000153294.g ##30	ENSGT00390000004339.t ##31	ENSGT00390000009787.bb ##32	ENSGT00940000158829.b ##33	ENSGT00390000011980.b.b.b ##34
Golden-line barbel	MODERN SPECIES	11	hspb15 (ENSSGRG00000006546) ##8	dab2 (ENSSGRG00000006535) ##9	c9 (ENSSGRG00000006507)	gas1b (ENSSGRG00000006506) ##10	fbxw2 (ENSSGRG00000006505) ##11	ncs1a (ENSSGRG00000006493) ##12	gpr107 (ENSSGRG00000006218) ##13	ndor1 (ENSSGRG00000005492)	ntmt1 (ENSSGRG00000005442) ##14	ier5l (ENSSGRG00000005440) ##16	ptpa (ENSSGRG00000003585) ##17	crata (ENSSGRG00000001397) ##18	lrsam1 (ENSSGRG00000046852) ##19	rpl12 (ENSSGRG00000046847) ##20	pole3 (ENSSGRG00000046846) ##21	ccn1l1 (ENSSGRG00000046845) ##22	lmo4a (ENSSGRG00000046844) ##23	ENSSGRG00000046838 ##24	ENSSGRG00000046834	ENSSGRG00000046831 ##25	ENSSGRG00000046830 ##25	NPFFR2 (ENSSGRG00000046781)	ENSSGRG00000046778	ENSSGRG00000046777 #26	ENSSGRG00000046776 ##26	prkaa1 (ENSSGRG00000046663) ##27	kyat1 (ENSSGRG00000046159)	surf6 (ENSSGRG00000046151)	surf1 (ENSSGRG00000046150) ##29	RPL7A (ENSSGRG00000045999) ##30	med22 (ENSSGRG00000045998) ##31
Common carp reference	MODERN SPECIES	15	ENSCCRG00000060779 ##7	dab2 (ENSCCRG00000032132) ##9	c9 (ENSCCRG00000032128)	fbxw2 (ENSCCRG00000074424) ##11	ncs1a (ENSCCRG00000032121) ##12	gpr107 (ENSCCRG00000032112) ##13	ndor1 (ENSCCRG00000032106)	ntmt1 (ENSCCRG00000058345) ##14	ier5l (ENSCCRG00000057758) ##16	ptpa (ENSCCRG00000025867) ##17	crata (ENSCCRG00000024065) ##18	ENSCCRG00000024040	lrsam1 (ENSCCRG00000024030) ##19	rpl12 (ENSCCRG00000035688) ##20	pole3 (ENSCCRG00000054380) ##21	ccn1l1 (ENSCCRG00000024280) ##22	lmo4a (ENSCCRG00000035744) ##23	zgc:55461 (ENSCCRG00000028081) ##24	ENSCCRG00000030567 ##25	ENSCCRG00000050873	ENSCCRG00000001587	ENSCCRG00000056731 ##26	prkaa1 (ENSCCRG00000034210) ##27	kyat1 (ENSCCRG00000081468)	surf1 (ENSCCRG00000034272) ##29	ENSCCRG00000057824 ##30	med22 (ENSCCRG00000034299) ##31	zgc:103692 (ENSCCRG00000057134) ##32	usp20 (ENSCCRG00000033287) ##33	ptges (ENSCCRG00000077847) ##34	garnl3 (ENSCCRG00000034141) ##35
Goldfish	MODERN SPECIES	23	dab2 (ENSCARG00000053753) ##9	c9 (ENSCARG00000053807)	gas1b (ENSCARG00000053873) ##10	fbxw2 (ENSCARG00000053886) ##11	ncs1a (ENSCARG00000053890) ##12	gpr107 (ENSCARG00000053925) ##13	ndor1 (ENSCARG00000054025)	ntmt1 (ENSCARG00000054134) ##14	ier5l (ENSCARG00000054199) ##16	ptpa (ENSCARG00000054252) ##17	crata (ENSCARG00000055185) ##18	ENSCARG00000057036	lrsam1 (ENSCARG00000057109) ##19	rpl12 (ENSCARG00000058517) ##20	pole3 (ENSCARG00000058656) ##21	ccn1l1 (ENSCARG00000058690) ##22	lmo4a (ENSCARG00000058713) ##23	ENSCARG00000058801 ##24	ENSCARG00000058849	ENSCARG00000058950 ##25	NPFFR2 (ENSCARG00000059007)	ENSCARG00000059013	prkaa1 (ENSCARG00000059027) ##27	kyat1 (ENSCARG00000059358)	surf6 (ENSCARG00000059875)	surf1 (ENSCARG00000059885) ##29	RPL7A (ENSCARG00000059940) ##30	med22 (ENSCARG00000005742) ##31	zgc:103692 (ENSCARG00000005767) ##32	usp20 (ENSCARG00000005878) ##33	ptges (ENSCARG00000006304) ##34
Zebrafish	MODERN SPECIES	20	dab2 (ENSDARG00000031761) #9	c9 (ENSDARG00000016319)	gas1b (ENSDARG00000067984) #10	fbxw2 (ENSDARG00000009745) #11	ncs1a (ENSDARG00000055229) #12	gpr107 (ENSDARG00000103200) #13	ndor1 (ENSDARG00000007429)	ntmt1 (ENSDARG00000022399) #14	ier5l (ENSDARG00000054906) #16	ptpa (ENSDARG00000031985) #17	crata (ENSDARG00000040248) #18	ENSDARG00000095142	lrsam1 (ENSDARG00000060683) #19	rpl12 (ENSDARG00000006691) #20	pole3 (ENSDARG00000008551) #21	ccn1l1 (ENSDARG00000035422) #22	lmo4a (ENSDARG00000013853) #23	zgc:55461 (ENSDARG00000041723) ##24	ENSDARG00000041724 #25	NPFFR2 (ENSDARG00000060702)	ENSDARG00000060578	ENSDARG00000060584 #26	prkaa1 (ENSDARG00000060596) #27	ifitm1 (ENSDARG00000093303)	kyat1 (ENSDARG00000023645)	surf6 (ENSDARG00000035427)	surf1 (ENSDARG00000003592) #29	rpl7a (ENSDARG00000019230)	med22 (ENSDARG00000014148) #31	C5H9orf78 (ENSDARG00000002220) #32	usp20 (ENSDARG00000027501) #33
Characiphysae	ANCESTRAL SPECIES	142	ENSGT00940000155567 #9	ENSGT00940000159777	ENSGT00390000001195.a.b #10	ENSGT00930000151016 #11	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT00930000151050	ENSGT00390000008371.b #14	ENSGT00900000141021.b.a.d #16	ENSGT00390000011500 #17	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.a.b.a.b ##24	ENSGT00390000020276.mb.a	ENSGT00390000020276.mb.b	ENSGT00940000165492.a.a #25	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b #26	ENSGT00940000158865 #27	ENSGT00940000158797	ENSGT00390000006980	ENSGT00530000064194 #29	ENSGT00940000153294 #30	ENSGT00390000004339 #31	ENSGT00390000009787 #32
Channel catfish	MODERN SPECIES	20	GAS1 (ENSIPUG00000006779) #10	fbxw2 (ENSIPUG00000006792) #11	ENSIPUG00000006858	ncs1 (ENSIPUG00000006898) #12	gpr107 (ENSIPUG00000006957) #13	ndor1 (ENSIPUG00000006992)	ENSIPUG00000007066	ntmt1 (ENSIPUG00000007083) #14	ier5l (ENSIPUG00000007148) #16	ptpa (ENSIPUG00000007164) #17	crat (ENSIPUG00000007250) #18	ENSIPUG00000007367	Lrsam1 (ENSIPUG00000007487) #19	rpl12 (ENSIPUG00000007575) #20	pole3 (ENSIPUG00000007668) #21	ccn1l1 (ENSIPUG00000007680) #22	lmo4a (ENSIPUG00000007705) #23	ENSIPUG00000007738 ##24	ENSIPUG00000007750	ENSIPUG00000007759 #25	NPFFR2 (ENSIPUG00000007782)	ENSIPUG00000007855	ENSIPUG00000007883 #26	prkaa1 (ENSIPUG00000007912) #27	kyat1 (ENSIPUG00000007957)	kyat1 (ENSIPUG00000007984)	kyat1 (ENSIPUG00000008008)	surf6 (ENSIPUG00000008066)	surf1 (ENSIPUG00000008089) #29	rpl7a (ENSIPUG00000008146)	med22 (ENSIPUG00000008190) #31
Characiphysae_b	ANCESTRAL SPECIES	43	ENSGT00940000155567 #9	ENSGT00940000159777	ENSGT00390000001195.a.b #10	ENSGT00930000151016 #11	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT00930000151050	ENSGT00390000008371.b #14	ENSGT00900000141021.b.a.d #16	ENSGT00390000011500 #17	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.a.b.a.b ##24	ENSGT00390000020276.mb.a	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b #26	ENSGT00940000158865 #27	ENSGT00940000158797	ENSGT00390000006980	ENSGT00530000064194 #29	ENSGT00940000153294 #30	ENSGT00390000004339 #31	ENSGT00390000009787 #32	ENSGT00940000158829 #33	ENSGT00390000011980.b.b #34
Electric eel	MODERN SPECIES	29	gabarapa (ENSEEEG00000016196)	gps2 (ENSEEEG00000016194)	tp53 (ENSEEEG00000016191)	ENSEEEG00000016190	capga (ENSEEEG00000016178)	ncs1a (ENSEEEG00000016162) #12	gpr107 (ENSEEEG00000016155) #13	ndor1 (ENSEEEG00000016145)	ntmt1 (ENSEEEG00000016143) #14	ier5l (ENSEEEG00000016141) #16	ptpa (ENSEEEG00000015855) #17	crata (ENSEEEG00000015351) #18	lrsam1 (ENSEEEG00000015206) #19	rpl12 (ENSEEEG00000015168) #20	pole3 (ENSEEEG00000015165) #21	ccn1l1 (ENSEEEG00000015155) #22	lmo4a (ENSEEEG00000015152) #23	ENSEEEG00000015143 ##24	ENSEEEG00000015134	NPFFR2 (ENSEEEG00000015048)	ENSEEEG00000015040	ENSEEEG00000015021 #26	prkaa1 (ENSEEEG00000015011) #27	kyat1 (ENSEEEG00000014998)	surf6 (ENSEEEG00000014997)	surf1 (ENSEEEG00000014996) #29	RPL7A (ENSEEEG00000014979) #30	med22 (ENSEEEG00000014972) #31	zgc:103692 (ENSEEEG00000014971) #32	usp20 (ENSEEEG00000014969) #33	ptges (ENSEEEG00000014967) #34
Characoidei	ANCESTRAL SPECIES	69	ENSGT00940000155567 #9	ENSGT00940000159777	ENSGT00390000001195.a.b #10	ENSGT00930000151016 #11	ENSGT00940000154645.B #12	ENSGT00940000160451 #13	ENSGT00930000151050	ENSGT00390000008371.b #14	ENSGT00900000141021.b.a.d #16	ENSGT00390000011500 #17	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00530000064286	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b #26	ENSGT00940000158865 #27	ENSGT00940000158797	ENSGT00390000006980	ENSGT00530000064194 #29	ENSGT00940000155193	ENSGT00390000004339 #31	ENSGT00390000009787 #32	ENSGT00940000158829 #33	ENSGT00390000011980.b.b #34	ENSGT00390000016067	ENSGT01010000222313.A.b.b.b.a
Red-bellied piranha	MODERN SPECIES	2	ENSPNAG00000023180	c9 (ENSPNAG00000023200)	gas1b (ENSPNAG00000023216) #10	fbxw2 (ENSPNAG00000023239) #11	ncs1a (ENSPNAG00000023289) #12	gpr107 (ENSPNAG00000023306) #13	ndor1 (ENSPNAG00000023402)	ntmt1 (ENSPNAG00000023338) #14	ier5l (ENSPNAG00000023424) #16	ptpa (ENSPNAG00000023503) #17	crata (ENSPNAG00000023586) #18	ENSPNAG00000023633	lrsam1 (ENSPNAG00000023778) #19	rpl12 (ENSPNAG00000023834) #20	pole3 (ENSPNAG00000023860) #21	ccn1l1 (ENSPNAG00000023906) #22	lmo4a (ENSPNAG00000023937) #23	zgc:55461 (ENSPNAG00000023984) ##24	ENSPNAG00000024010	ENSPNAG00000024069	NPFFR2 (ENSPNAG00000024089)
Mexicana tetra	MODERN SPECIES	1329																ccn1l1 (ENSAMXG00000012731) #22	lmo4a (ENSAMXG00000035221) #23	zgc:55461 (ENSAMXG00000033008) ##24	ENSAMXG00000041464	ENSAMXG00000012686	ENSAMXG00000041483	ENSAMXG00000033350	ENSAMXG00000030558 #25	ENSAMXG00000037785 #25	ENSAMXG00000040666 #25	ENSAMXG00000041783 #25
Clupeiformes	ANCESTRAL SPECIES	105	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000154079.b.b	ENSGT00940000155946.c.b	ENSGT00930000151016 #11	ENSGT00940000154645.B.e #12	ENSGT00940000160451 #13	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d.a #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00390000020276.mb.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157936	ENSGT00940000157194.d	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a
Atlantic herring	MODERN SPECIES	3	ENSCHAG00000026083	zbtb43 (ENSCHAG00000002356)	RALGPS1 (ENSCHAG00000002473)	angptl2a (ENSCHAG00000003585)	fbxw2 (ENSCHAG00000003600) #11	ncs1a (ENSCHAG00000003645) #12	gpr107 (ENSCHAG00000003724) #13	crata (ENSCHAG00000003848) #18	ptpa (ENSCHAG00000004320) #17	ier5l (ENSCHAG00000004832) #16	ntmt1 (ENSCHAG00000004859) #14	ndor1 (ENSCHAG00000004879)	lrsam1 (ENSCHAG00000005132) #19	rpl12 (ENSCHAG00000005485) #20	pole3 (ENSCHAG00000005619) #21	ccn1l1 (ENSCHAG00000005656) #22	lmo4a (ENSCHAG00000005730) #23	ENSCHAG00000005749 ##24	ENSCHAG00000005894	fpgs (ENSCHAG00000006452)	cdk9 (ENSCHAG00000007237)	CRB2 (ENSCHAG00000007287)	DENND1A (ENSCHAG00000007433)	LHX2 (ENSCHAG00000009120)	NEK6 (ENSCHAG00000009167)	psmb7 (ENSCHAG00000009649)	nr5a1b (ENSCHAG00000009743)	NR6A1 (ENSCHAG00000009757)	OLFML2A (ENSCHAG00000009877)	rpl35 (ENSCHAG00000009913)	arpc5lb (ENSCHAG00000009956)
Denticle herring	MODERN SPECIES	13	zbtb43 (ENSDCDG00000027184)	RALGPS1 (ENSDCDG00000027193)	angptl2a (ENSDCDG00000027249)	fbxw2 (ENSDCDG00000027250) #11	ncs1a (ENSDCDG00000027251) #12	gpr107 (ENSDCDG00000027253) #13	crata (ENSDCDG00000027328) #18	ptpa (ENSDCDG00000027993) #17	ier5l (ENSDCDG00000028362) #16	ntmt1 (ENSDCDG00000028367) #14	ndor1 (ENSDCDG00000028380)	lrsam1 (ENSDCDG00000028407) #19	rpl12 (ENSDCDG00000028508) #20	pole3 (ENSDCDG00000028534) #21	ENSDCDG00000028537	ccn1l1 (ENSDCDG00000028541) #22	lmo4a (ENSDCDG00000028675) #23	ENSDCDG00000028678 ##24	ENSDCDG00000028697	fpgs (ENSDCDG00000028799)	cdk9 (ENSDCDG00000029739)	CRB2 (ENSDCDG00000029740)	DENND1A (ENSDCDG00000029744)	LHX2 (ENSDCDG00000013115)	NEK6 (ENSDCDG00000013125)	psmb7 (ENSDCDG00000013357)	nr5a1b (ENSDCDG00000013415)	NR6A1 (ENSDCDG00000013420)	OLFML2A (ENSDCDG00000013436)	ENSDCDG00000013448	rpl35 (ENSDCDG00000013468)
Euteleosteomorpha	ANCESTRAL SPECIES	293							ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00930000151044 #19	ENSGT00940000170916	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00940000165492.a.a #25
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.d #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286	ENSGT00940000155151.a.a.a ##22	ENSGT00940000164907.b.a ##23	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00940000154394.a.e.b ##24	ENSGT00940000165492.b ##25	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00940000165492.a.a #25	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00390000020276	ENSGT00390000008042.B.o	ENSGT01100000263515.a.b.a.b.b.k.a.a.b	ENSGT00390000008042.B.p	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00940000154645.B #12	ENSGT00940000164697.b	ENSGT00940000157194	ENSGT00390000016384.l.b
Salmoninae	ANCESTRAL SPECIES	134	ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500.k #17	ENSGT00900000141021.b.a.d.e #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b.d.a #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00940000165492.a.a #25	ENSGT00390000004692.d.a.n	ENSGT00980000199397.a	ENSGT00940000154394.b.a.b.q ##24	ENSGT00940000155151.a.a.a.d ##22	ENSGT00940000164907.b.a.c ##23	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00390000020276.lb	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00940000167171	ENSGT00390000016384.l.a
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500.k #17	ENSGT00900000141021.b.a.d.e #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b.d.a #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00940000154394.b.a.b.q ##24	ENSGT00940000155151.a.a.a.d ##22	ENSGT00940000164907.b.a.c ##23	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b ##24	ENSGT00390000020276.lb	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d
Salmo	ANCESTRAL SPECIES		ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT00940000167707	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500.k #17	ENSGT00900000141021.b.a.d.e #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b.d.a #23	ENSGT00940000154394.b.a.a.b.b ##24	ENSGT00390000020276.lb	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.a	ENSGT01000000220495
Atlantic salmon	MODERN SPECIES		NEK6 (ENSSSAG00000111428)	LHX2 (ENSSSAG00000069676)	crb2a (ENSSSAG00000070752)	DENND1A (ENSSSAG00000070774)	cdk9 (ENSSSAG00000070738)	ENSSSAG00000070732	crata (ENSSSAG00000067447) #18	ptpa (ENSSSAG00000066908) #17	IER5 (ENSSSAG00000066882) #16	ntmt1 (ENSSSAG00000066881) #14	ndor1 (ENSSSAG00000066849)	ENSSSAG00000066833	rpl12 (ENSSSAG00000066776) #20	lrsam1 (ENSSSAG00000066808) #19	pole3 (ENSSSAG00000066768) #21	ccn1l1 (ENSSSAG00000116908) #22	lmo4a (ENSSSAG00000066759) #23	zgc:55461 (ENSSSAG00000101622) ##24	ENSSSAG00000066731	ENSSSAG00000066321	ENSSSAG00000066294 #13	ncs1a (ENSSSAG00000066286)	ENSSSAG00000094965	RPL35 (ENSSSAG00000066273)	arpc5l (ENSSSAG00000066267)	SCAI (ENSSSAG00000117569)	ppp6c (ENSSSAG00000119839)	ENSSSAG00000065463	ENSSSAG00000065449	ENSSSAG00000064650	ENSSSAG00000114149
River trout	MODERN SPECIES	15	LHX2 (ENSSTUG00000017212)	DENND1A (ENSSTUG00000017039)	ENSSTUG00000016961	cdk9 (ENSSTUG00000016931)	ENSSTUG00000016927	crata (ENSSTUG00000014589) #18	ptpa (ENSSTUG00000013797) #17	ier5l (ENSSTUG00000013752) #16	ntmt1 (ENSSTUG00000013744) #14	ndor1 (ENSSTUG00000013700)	ENSSTUG00000013659	lrsam1 (ENSSTUG00000013165) #19	ENSSTUG00000013137	rpl12 (ENSSTUG00000013074) #20	pole3 (ENSSTUG00000013038) #21	ccn1l1 (ENSSTUG00000013028) #22	ENSSTUG00000013026	lmo4a (ENSSTUG00000013015) #23	ENSSTUG00000012998	ENSSTUG00000012981	ENSSTUG00000012952 ##24	ENSSTUG00000012902 #25	fpgs (ENSSTUG00000010958)	gpr107 (ENSSTUG00000010800) #13	ENSSTUG00000010777	ENSSTUG00000010763	rpl35 (ENSSTUG00000010753)	arpc5lb (ENSSTUG00000010719)	SCAI (ENSSTUG00000010309)	ppp6c (ENSSTUG00000010278)	p2rx4a (ENSSTUG00000010155)
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000157419.x	ENSGT00940000159990.d	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500.k #17	ENSGT00900000141021.b.a.d.e #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b.d.a #23	ENSGT00940000165492.a.a #25	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT00940000161345.c	ENSGT00940000156340.a.d.c
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000157419.x	ENSGT00940000159990.d	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #18	ENSGT00390000011500.k #17	ENSGT00900000141021.b.a.d.e #16	ENSGT00390000008371.b #14	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044 #19	ENSGT00390000006922 #20	ENSGT00940000164386 #21	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.b.d.a #23	ENSGT00940000165492.a.a #25	ENSGT00390000016526	ENSGT00940000160451 #13	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT00940000161345.c	ENSGT00940000156340.a.d.c
Coho salmon	MODERN SPECIES	15	NEK6 (ENSOKIG00005039628)	LHX2 (ENSOKIG00005039581)	DENND1A (ENSOKIG00005038947)	ENSOKIG00005038911	crb2a (ENSOKIG00005038790)	cdk9 (ENSOKIG00005038769)	crata (ENSOKIG00005036280) #18	ptpa (ENSOKIG00005037321) #17	ier5l (ENSOKIG00005037286) #16	ntmt1 (ENSOKIG00005037263) #14	ndor1 (ENSOKIG00005037020)	ENSOKIG00005036987	lrsam1 (ENSOKIG00005036797) #19	rpl12 (ENSOKIG00005036665) #20	pole3 (ENSOKIG00005036619) #21	ccn1l1 (ENSOKIG00005036602) #22	lmo4a (ENSOKIG00005036570) #23	ENSOKIG00005036524 ##24	ENSOKIG00005036469 #25	fpgs (ENSOKIG00005035313)	gpr107 (ENSOKIG00005035007) #13	ENSOKIG00005034963	ENSOKIG00005034941	RPL35 (ENSOKIG00005034926)	arpc5lb (ENSOKIG00005034885)	SCAI (ENSOKIG00005034777)	ppp6c (ENSOKIG00005034752)	ENSOKIG00005034668	PTGES2 (ENSOKIG00005034633)	zer1 (ENSOKIG00005034579)	TBC1D13 (ENSOKIG00005034529)
Chinook salmon	MODERN SPECIES	12	psmb7 (ENSOTSG00005047328)	NEK6 (ENSOTSG00005047329)	LHX2 (ENSOTSG00005047331)	DENND1A (ENSOTSG00005047332)	CRB2 (ENSOTSG00005047456)	crata (ENSOTSG00005047465) #18	ptpa (ENSOTSG00005047657) #17	ier5l (ENSOTSG00005047663) #16	ntmt1 (ENSOTSG00005047665) #14	ndor1 (ENSOTSG00005047666)	ENSOTSG00005047669	lrsam1 (ENSOTSG00005047670) #19	rpl12 (ENSOTSG00005047672) #20	pole3 (ENSOTSG00005047680) #21	ENSOTSG00005047681	ccn1l1 (ENSOTSG00005047682) #22	lmo4a (ENSOTSG00005047683) #23	ENSOTSG00005047684	TUBB4B (ENSOTSG00005047686) ##24	ENSOTSG00005047687 #25	fpgs (ENSOTSG00005047697)	gpr107 (ENSOTSG00005047719) #13	ENSOTSG00005047726	ENSOTSG00005047730	rpl35 (ENSOTSG00005047731)	arpc5lb (ENSOTSG00005047733)	SCAI (ENSOTSG00005047741)	ppp6c (ENSOTSG00005047746)	p2rx4a (ENSOTSG00005047749)	ENSOTSG00005047750	PTGES2 (ENSOTSG00005047751)
Rainbow trout	MODERN SPECIES	26	DENND1A (ENSOMYG00000041827)	ENSOMYG00000072052	crb2a (ENSOMYG00000042025)	ENSOMYG00000042044	crata (ENSOMYG00000042148) #18	ptpa (ENSOMYG00000042435) #17	ENSOMYG00000060240	ier5l (ENSOMYG00000042486) #16	ENSOMYG00000060356	ntmt1 (ENSOMYG00000042491) #14	ndor1 (ENSOMYG00000042500)	ENSOMYG00000042517	lrsam1 (ENSOMYG00000042530) #19	rpl12 (ENSOMYG00000042549) #20	pole3 (ENSOMYG00000042572) #21	ccn1l1 (ENSOMYG00000042576) #22	lmo4a (ENSOMYG00000042581) #23	ENSOMYG00000042585	ENSOMYG00000042589 #25	ENSOMYG00000042662	ENSOMYG00000042954 #13	ENSOMYG00000042982	ENSOMYG00000077280	ENSOMYG00000042991	ENSOMYG00000068299	RPL35 (ENSOMYG00000042997)	arpc5l (ENSOMYG00000043006)	SCAI (ENSOMYG00000043028)	ppp6c (ENSOMYG00000043082)	ENSOMYG00000043101	ENSOMYG00000043121
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1573							ENSHHUG00000050502	ntmt1 (ENSHHUG00000050489) #14	ndor1 (ENSHHUG00000050475)	ENSHHUG00000050471	ENSHHUG00000050466	lrsam1 (ENSHHUG00000050460) #19	rpl12 (ENSHHUG00000050429) #20	pole3 (ENSHHUG00000050421) #21	ENSHHUG00000050420	ccn1l1 (ENSHHUG00000050415) #22	lmo4a (ENSHHUG00000050413) #23	zgc:55461 (ENSHHUG00000050408) ##24	ENSHHUG00000050390 #25	fpgs (ENSHHUG00000050379)	gpr107 (ENSHHUG00000050371) #13	ENSHHUG00000050325	ENSHHUG00000050321
Huchen	MODERN SPECIES	222										ENSHHUG00000030785	DENND1A (ENSHHUG00000030793)	ENSHHUG00000030815	ENSHHUG00000030817 #17	ier5l (ENSHHUG00000030819) #16	ENSHHUG00000030821	ccn1l1 (ENSHHUG00000030825) #22	lmo4a (ENSHHUG00000030835) #23	arpc5lb (ENSHHUG00000030847)	ppp6c (ENSHHUG00000030893)	ENSHHUG00000030902
Northern pike	MODERN SPECIES	13	nr5a1b (ENSELUG00000019192)	psmb7 (ENSELUG00000019284)	NEK6 (ENSELUG00000019344)	LHX2 (ENSELUG00000019408)	DENND1A (ENSELUG00000000844)	CRB2 (ENSELUG00000019522)	cdk9 (ENSELUG00000019692)	crata (ENSELUG00000019745) #18	ptpa (ENSELUG00000000869) #17	ier5l (ENSELUG00000019814) #16	ENSELUG00000034166	ntmt1 (ENSELUG00000019833) #14	lrsam1 (ENSELUG00000019893) #19	rpl12 (ENSELUG00000019938) #20	pole3 (ENSELUG00000001285) #21	ccn1l1 (ENSELUG00000019976) #22	lmo4a (ENSELUG00000019991) #23	TUBB4B (ENSELUG00000020007) ##24	ENSELUG00000030475 ##24	ENSELUG00000024741	ENSELUG00000020184	ENSELUG00000027081	fpgs (ENSELUG00000020278)	gpr107 (ENSELUG00000020299) #13	ncs1a (ENSELUG00000032344) #12	ENSELUG00000033861	ENSELUG00000020408	ENSELUG00000020415	ENSELUG00000020421	ENSELUG00000020427	ENSELUG00000020436
Osteoglossiformes	ANCESTRAL SPECIES	75									ENSGT00930000151016 #11	ENSGT01060000248556.A.a.a.a.b.b ##18	ENSGT00940000158379	ENSGT00390000011500 #17	ENSGT00900000141021.b.a.c.a ##16	ENSGT00390000006784	ENSGT00530000064286.a	ENSGT00940000155151.a.a.b #22	ENSGT00940000164907.b.a ##23	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00940000154394.a ##24	ENSGT00940000154394.b.a.a.a.b.b #24	ENSGT00940000165492.a.a #25	ENSGT00390000016526.h	ENSGT00950000183101.a.b.b.a.a.l	ENSGT00940000153391.c.b.a.h	ENSGT00940000157936	ENSGT00940000157194.f	ENSGT00390000016384	ENSGT00940000158501.a	ENSGT00940000153772.B	ENSGT00390000009566.d	ENSGT00550000074961.a.a
Asian bonytongue	MODERN SPECIES	8	ralgps1 (ENSSFOG00015017038)	ENSSFOG00015017133	ENSSFOG00015017015	ENSSFOG00015033301	ENSSFOG00015017012	fbxw2 (ENSSFOG00015016968) #11	ENSSFOG00015003976	NCS1 (ENSSFOG00015016804) #12	CRAT (ENSSFOG00015016764) ##18	ENSSFOG00015016722	ptpa (ENSSFOG00015016682) #17	IER5L (ENSSFOG00015030523) ##16	asb6 (ENSSFOG00015016641)	FKBP15 (ENSSFOG00015016577)	rpl12 (ENSSFOG00015031530) #20	ENSSFOG00015016467 #22	ENSSFOG00015016442 ##23	bcl2l16 (ENSSFOG00015016433)	ENSSFOG00015011323 #24	ENSSFOG00015016374 #25	FPGS (ENSSFOG00015016349)	CRB2 (ENSSFOG00015016231)	lhx2b (ENSSFOG00015008780)	NEK6 (ENSSFOG00015032992)	NR5A1 (ENSSFOG00015008707)	nr6a1a (ENSSFOG00015008672)	OLFML2A (ENSSFOG00015008626)	rpl35 (ENSSFOG00015008582)	ARPC5L (ENSSFOG00015008543)	golga1 (ENSSFOG00015008493)	SCAI (ENSSFOG00015008413)
P. kingsleyae	MODERN SPECIES	36	ENSPKIG00000024679	ralgps1 (ENSPKIG00000024643)	si:dkey-56i24.1 (ENSPKIG00000024619)	fbxw2 (ENSPKIG00000024600) #11	ENSPKIG00000024575	ENSPKIG00000024565	ENSPKIG00000024549	ENSPKIG00000024542	ENSPKIG00000024531	zgc:154046 (ENSPKIG00000024502) ##18	ADAMTS13 (ENSPKIG00000024467)	ptpa (ENSPKIG00000024438) #17	IER5L (ENSPKIG00000024424) ##16	asb6 (ENSPKIG00000024415)	FKBP15 (ENSPKIG00000024375)	ccn1l1 (ENSPKIG00000024360) #22	ENSPKIG00000024343 ##23	bcl2l16 (ENSPKIG00000024322)	tubb2b (ENSPKIG00000024313) ##24	ENSPKIG00000024304	ENSPKIG00000024292	FPGS (ENSPKIG00000024268)	CRB2 (ENSPKIG00000024247)	ENSPKIG00000024237	lhx2b (ENSPKIG00000024197)	ENSPKIG00000024188	NEK6 (ENSPKIG00000024170)	ADGRD2 (ENSPKIG00000024114)	NR5A1 (ENSPKIG00000024096)	nr6a1a (ENSPKIG00000024074)	OLFML2A (ENSPKIG00000024055)
Spotted gar	MODERN SPECIES	660	CERCAM (ENSLOCG00000002746)	cfap157 (ENSLOCG00000002725)	sardh (ENSLOCG00000002697)	dbh (ENSLOCG00000002677)	FAM163B (ENSLOCG00000002663)	ADAMTSL2 (ENSLOCG00000002647)	mymk (ENSLOCG00000002633)	ENSLOCG00000002619	slc27a4 (ENSLOCG00000002609)	ENSLOCG00000002597	ENSLOCG00000002585	ENSLOCG00000002569	ENSLOCG00000002555	lrsam1 (ENSLOCG00000002536) #19	pole3 (ENSLOCG00000002521) #21	ccn1l1 (ENSLOCG00000002502) #22	lmo4a (ENSLOCG00000002487) #23	ENSLOCG00000002479	ENSLOCG00000002458	ENSLOCG00000002441 ##24	ENSLOCG00000002421 ##24	ENSLOCG00000002409	ENSLOCG00000002383	tor4aa (ENSLOCG00000017339)	ENSLOCG00000002366	wdr31 (ENSLOCG00000002358)	EXD3 (ENSLOCG00000002330)	nrarpa (ENSLOCG00000017338)	ambp (ENSLOCG00000002312)	lcn15 (ENSLOCG00000002295)	slc2a8 (ENSLOCG00000002280)