Sarcopterygii	ANCESTRAL SPECIES	99														ENSGT00940000158236 #19	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000176900	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Tetrapoda	ANCESTRAL SPECIES	95														ENSGT00940000158236 #19	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Amniota	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428 #18	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Theria	ANCESTRAL SPECIES	4	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d	ENSGT00940000161275 #36
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Glires	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Kangaroo rat	MODERN SPECIES	417			Zdhhc14 (ENSDORG00000024450) #9	Tmem242 (ENSDORG00000023296) #10	Arid1b (ENSDORG00000014985) #11	Nox3 (ENSDORG00000009803) #12	Tfb1m (ENSDORG00000012938) #13	Tiam2 (ENSDORG00000012933) #14	Scaf8 (ENSDORG00000006391) #15	ENSDORG00000027053 #16	Cnksr3 (ENSDORG00000008824) #17	Ipcef1 (ENSDORG00000023655) #18	Oprm1 (ENSDORG00000002315) #19	Rgs17 (ENSDORG00000011002) #20	Mtrf1l (ENSDORG00000010997) #21	Fbxo5 (ENSDORG00000000495) #22	Vip (ENSDORG00000015940) #23	Myct1 (ENSDORG00000027276) #24	Syne1 (ENSDORG00000013226) #25	Esr1 (ENSDORG00000010443) #26	Ccdc170 (ENSDORG00000014673) #27	ENSDORG00000000434 #28	ENSDORG00000025869 #29	Zbtb2 (ENSDORG00000013305) #30	Mthfd1l (ENSDORG00000006234) #31	ENSDORG00000029716 #32	Iyd (ENSDORG00000016201) #33	Ppp1r14c (ENSDORG00000029153) #34	ENSDORG00000023774 #35	Lrp11 (ENSDORG00000003139) #36	Pcmt1 (ENSDORG00000003137) #37
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Northern American deer mouse	MODERN SPECIES	7	Snx9 (ENSPEMG00000018518)	Zdhhc14 (ENSPEMG00000019121) #9	Tmem242 (ENSPEMG00000016796) #10	Arid1b (ENSPEMG00000008950) #11	ENSPEMG00000014483	Nox3 (ENSPEMG00000010502) #12	ENSPEMG00000030418	Tfb1m (ENSPEMG00000010410) #13	Tiam2 (ENSPEMG00000019186) #14	Scaf8 (ENSPEMG00000010531) #15	Cnksr3 (ENSPEMG00000009492) #17	Ipcef1 (ENSPEMG00000017460) #18	Oprm1 (ENSPEMG00000013691) #19	Rgs17 (ENSPEMG00000002088) #20	Mtrf1l (ENSPEMG00000018112) #21	Fbxo5 (ENSPEMG00000017534) #22	ENSPEMG00000005147	Vip (ENSPEMG00000007974) #23	Myct1 (ENSPEMG00000016041) #24	ENSPEMG00000007014 #25	ENSPEMG00000013933	ENSPEMG00000029017 #25	ENSPEMG00000000704 #25	Esr1 (ENSPEMG00000012747) #26	ENSPEMG00000028412	Ccdc170 (ENSPEMG00000018858) #27	Armt1 (ENSPEMG00000027664) #28	Rmnd1 (ENSPEMG00000014544) #29	Zbtb2 (ENSPEMG00000028248) #30	ENSPEMG00000028722	Mthfd1l (ENSPEMG00000012428) #31
Prairie vole	MODERN SPECIES	358	Synj2 (ENSMOCG00000020054)	Snx9 (ENSMOCG00000021777)	Zdhhc14 (ENSMOCG00000010952) #9	Tmem242 (ENSMOCG00000011673) #10	Arid1b (ENSMOCG00000017619) #11	Nox3 (ENSMOCG00000002324) #12	Tfb1m (ENSMOCG00000013879) #13	ENSMOCG00000017009	Tiam2 (ENSMOCG00000019544) #14	Scaf8 (ENSMOCG00000014950) #15	Cnksr3 (ENSMOCG00000020668) #17	Ipcef1 (ENSMOCG00000015115) #18	Oprm1 (ENSMOCG00000009671) #19	Rgs17 (ENSMOCG00000013891) #20	Mtrf1l (ENSMOCG00000016147) #21	Fbxo5 (ENSMOCG00000016622) #22	Vip (ENSMOCG00000000402) #23	Myct1 (ENSMOCG00000003327) #24	Syne1 (ENSMOCG00000003007) #25	Esr1 (ENSMOCG00000004623) #26	ENSMOCG00000008666	Ccdc170 (ENSMOCG00000015340) #27	Armt1 (ENSMOCG00000008335) #28	Rmnd1 (ENSMOCG00000012373) #29	Zbtb2 (ENSMOCG00000018175) #30	ENSMOCG00000019373	Mthfd1l (ENSMOCG00000011918) #31	Plekhg1 (ENSMOCG00000006027) #32	Iyd (ENSMOCG00000012475) #33	Ppp1r14c (ENSMOCG00000002551) #34	ENSMOCG00000008070
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000165162	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Chinese hamster chok1gshd	MODERN SPECIES	1	Snx9 (ENSCGRG00001001484)	Zdhhc14 (ENSCGRG00001000563) #9	Tmem242 (ENSCGRG00001024838) #10	Arid1b (ENSCGRG00001024894) #11	Nox3 (ENSCGRG00001023896) #12	ENSCGRG00001008208	Tfb1m (ENSCGRG00001022866) #13	Tiam2 (ENSCGRG00001023036) #14	Scaf8 (ENSCGRG00001020167) #15	Cnksr3 (ENSCGRG00001012107) #17	Ipcef1 (ENSCGRG00001002463) #18	Oprm1 (ENSCGRG00001003333) #19	ENSCGRG00001007014	Rgs17 (ENSCGRG00001008622) #20	Mtrf1l (ENSCGRG00001024662) #21	Fbxo5 (ENSCGRG00001024225) #22	Vip (ENSCGRG00001023726) #23	Myct1 (ENSCGRG00001007389) #24	ENSCGRG00001017406 #25	ENSCGRG00001016292	ENSCGRG00001024508 #25	Esr1 (ENSCGRG00001024268) #26	Ccdc170 (ENSCGRG00001019582) #27	Armt1 (ENSCGRG00001019042) #28	Rmnd1 (ENSCGRG00001018312) #29	Zbtb2 (ENSCGRG00001023273) #30	Akap12 (ENSCGRG00001022879)	Mthfd1l (ENSCGRG00001022372) #31	Plekhg1 (ENSCGRG00001023431) #32	Iyd (ENSCGRG00001022969) #33	Ppp1r14c (ENSCGRG00001022707) #34
Golden Hamster	MODERN SPECIES	621	Zdhhc14 (ENSMAUG00000018645) #9	Tmem242 (ENSMAUG00000006231) #10	Arid1b (ENSMAUG00000017697) #11	ENSMAUG00000015104	Nox3 (ENSMAUG00000013920) #12	ENSMAUG00000009291	Tfb1m (ENSMAUG00000006705) #13	Tiam2 (ENSMAUG00000016491) #14	Scaf8 (ENSMAUG00000009513) #15	Cnksr3 (ENSMAUG00000017992) #17	ENSMAUG00000008972	Ipcef1 (ENSMAUG00000020692) #18	Oprm1 (ENSMAUG00000016741) #19	ENSMAUG00000021559	Mtrf1l (ENSMAUG00000017702) #21	Fbxo5 (ENSMAUG00000000824) #22	Vip (ENSMAUG00000014470) #23	Myct1 (ENSMAUG00000014906) #24	ENSMAUG00000019847 #25	ENSMAUG00000012320	ENSMAUG00000014937 #25	Esr1 (ENSMAUG00000006785) #26	Ccdc170 (ENSMAUG00000008640) #27	Armt1 (ENSMAUG00000012945) #28	Rmnd1 (ENSMAUG00000011585) #29	Zbtb2 (ENSMAUG00000008627) #30	ENSMAUG00000020409	Mthfd1l (ENSMAUG00000016191) #31	ENSMAUG00000011570 #32	Iyd (ENSMAUG00000013810) #33	Ppp1r14c (ENSMAUG00000019718) #34
Murinae	ANCESTRAL SPECIES	29	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Mus	ANCESTRAL SPECIES	15	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b #37	ENSGT00940000161275 #36	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Mus_A	ANCESTRAL SPECIES	11	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b #37	ENSGT00940000161275 #36	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b #37	ENSGT00940000161275 #36	ENSGT01100000263531.A	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c.x	ENSGT00940000169591.d
Mouse	MODERN SPECIES	1	Tab2 (ENSMUSG00000015755)	Zc3h12d (ENSMUSG00000039981)	Ppil4 (ENSMUSG00000015757)	Ginm1 (ENSMUSG00000040006)	Katna1 (ENSMUSG00000019794)	Lats1 (ENSMUSG00000040021)	Nup43 (ENSMUSG00000040034)	Pcmt1 (ENSMUSG00000019795) #37	Lrp11 (ENSMUSG00000019796) #36	Ulbp1 (ENSMUSG00000079685)	Cnksr3 (ENSMUSG00000015202) #17	Ipcef1 (ENSMUSG00000064065) #18	Oprm1 (ENSMUSG00000000766) #19	Rgs17 (ENSMUSG00000019775) #20	Mtrf1l (ENSMUSG00000019774) #21	Fbxo5 (ENSMUSG00000019773) #22	Vip (ENSMUSG00000019772) #23	Myct1 (ENSMUSG00000046916) #24	Syne1 (ENSMUSG00000096054) #25	Esr1 (ENSMUSG00000019768) #26	Ccdc170 (ENSMUSG00000019767) #27	Armt1 (ENSMUSG00000061759) #28	Rmnd1 (ENSMUSG00000019763) #29	Zbtb2 (ENSMUSG00000075327) #30	Akap12 (ENSMUSG00000038587)	Mthfd1l (ENSMUSG00000040675) #31	Plekhg1 (ENSMUSG00000040624) #32	Iyd (ENSMUSG00000019762) #33	Ppp1r14c (ENSMUSG00000040653) #34	H60c (ENSMUSG00000091618)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b #37	ENSGT00940000161275 #36	ENSGT01100000263531.A	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c.x	ENSGT00940000169591.d
Steppe mouse	MODERN SPECIES	3108	Ginm1 (ENSMSIG00000025038)	Katna1 (ENSMSIG00000025062)	Lats1 (ENSMSIG00000025078)	ENSMSIG00000025088 #37	Nup43 (ENSMSIG00000025146)	Lrp11 (ENSMSIG00000025159) #36	ENSMSIG00000025191	ENSMSIG00000025199	Cnksr3 (ENSMSIG00000025229) #17	Oprm1 (ENSMSIG00000025261) #19	Ipcef1 (ENSMSIG00000025435) #18	ENSMSIG00000025467	ENSMSIG00000025479	Rgs17 (ENSMSIG00000025486) #20	Mtrf1l (ENSMSIG00000025539) #21	Fbxo5 (ENSMSIG00000025556) #22
spretus	MODERN SPECIES	1	Tab2 (MGP_SPRETEiJ_G0015912)	Zc3h12d (MGP_SPRETEiJ_G0015911)	Ppil4 (MGP_SPRETEiJ_G0015910)	Ginm1 (MGP_SPRETEiJ_G0015909)	Katna1 (MGP_SPRETEiJ_G0015908)	Lats1 (MGP_SPRETEiJ_G0015907)	Nup43 (MGP_SPRETEiJ_G0015906)	MGP_SPRETEiJ_G0015905 #37	Lrp11 (MGP_SPRETEiJ_G0015904) #36	MGP_SPRETEiJ_G0015903	Cnksr3 (MGP_SPRETEiJ_G0015902) #17	Ipcef1 (MGP_SPRETEiJ_G0015901) #18	Oprm1 (MGP_SPRETEiJ_G0015900) #19	Rgs17 (MGP_SPRETEiJ_G0015899) #20	Mtrf1l (MGP_SPRETEiJ_G0015898) #21	Fbxo5 (MGP_SPRETEiJ_G0015897) #22	Vip (MGP_SPRETEiJ_G0015896) #23	Myct1 (MGP_SPRETEiJ_G0015895) #24	MGP_SPRETEiJ_G0015893	Esr1 (MGP_SPRETEiJ_G0015891) #26	Ccdc170 (MGP_SPRETEiJ_G0015890) #27	Armt1 (MGP_SPRETEiJ_G0015889) #28	Rmnd1 (MGP_SPRETEiJ_G0015888) #29	Zbtb2 (MGP_SPRETEiJ_G0015887) #30	Akap12 (MGP_SPRETEiJ_G0015886)	Mthfd1l (MGP_SPRETEiJ_G0015885) #31	Plekhg1 (MGP_SPRETEiJ_G0015884) #32	Iyd (MGP_SPRETEiJ_G0015883) #33	Ppp1r14c (MGP_SPRETEiJ_G0015882) #34	MGP_SPRETEiJ_G0015881	MGP_SPRETEiJ_G0015880
Ryukyu mouse	MODERN SPECIES	1	Ust (MGP_CAROLIEiJ_G0015106)	Tab2 (MGP_CAROLIEiJ_G0015105)	Zc3h12d (MGP_CAROLIEiJ_G0015104)	Ppil4 (MGP_CAROLIEiJ_G0015103)	Ginm1 (MGP_CAROLIEiJ_G0015102)	MGP_CAROLIEiJ_G0015101	Lats1 (MGP_CAROLIEiJ_G0015100)	Nup43 (MGP_CAROLIEiJ_G0015099)	MGP_CAROLIEiJ_G0015098 #37	Lrp11 (MGP_CAROLIEiJ_G0015097) #36	Cnksr3 (MGP_CAROLIEiJ_G0015096) #17	Ipcef1 (MGP_CAROLIEiJ_G0015095) #18	Oprm1 (MGP_CAROLIEiJ_G0015094) #19	Rgs17 (MGP_CAROLIEiJ_G0015093) #20	Mtrf1l (MGP_CAROLIEiJ_G0015092) #21	Fbxo5 (MGP_CAROLIEiJ_G0015091) #22	Vip (MGP_CAROLIEiJ_G0015090) #23	Myct1 (MGP_CAROLIEiJ_G0015089) #24	MGP_CAROLIEiJ_G0015088	MGP_CAROLIEiJ_G0015087 #25	Esr1 (MGP_CAROLIEiJ_G0015086) #26	Ccdc170 (MGP_CAROLIEiJ_G0015085) #27	Armt1 (MGP_CAROLIEiJ_G0015084) #28	Rmnd1 (MGP_CAROLIEiJ_G0015083) #29	Zbtb2 (MGP_CAROLIEiJ_G0015082) #30	Akap12 (MGP_CAROLIEiJ_G0015081)	Mthfd1l (MGP_CAROLIEiJ_G0015080) #31	Plekhg1 (MGP_CAROLIEiJ_G0015079) #32	Iyd (MGP_CAROLIEiJ_G0015078) #33	Ppp1r14c (MGP_CAROLIEiJ_G0015077) #34
Shrew mouse	MODERN SPECIES	13	Ust (MGP_PahariEiJ_G0023725)	MGP_PahariEiJ_G0023724	Zc3h12d (MGP_PahariEiJ_G0023723)	Ppil4 (MGP_PahariEiJ_G0023722)	Ginm1 (MGP_PahariEiJ_G0023721)	Katna1 (MGP_PahariEiJ_G0023720)	Lats1 (MGP_PahariEiJ_G0023719)	Nup43 (MGP_PahariEiJ_G0023718)	Pcmt1 (MGP_PahariEiJ_G0023717) #37	Lrp11 (MGP_PahariEiJ_G0023716) #36	Cnksr3 (MGP_PahariEiJ_G0023715) #17	Ipcef1 (MGP_PahariEiJ_G0023714) #18	Oprm1 (MGP_PahariEiJ_G0023713) #19	Rgs17 (MGP_PahariEiJ_G0023712) #20	Mtrf1l (MGP_PahariEiJ_G0023711) #21	Fbxo5 (MGP_PahariEiJ_G0023710) #22	Vip (MGP_PahariEiJ_G0023709) #23	Myct1 (MGP_PahariEiJ_G0023708) #24	MGP_PahariEiJ_G0023707	MGP_PahariEiJ_G0023706 #25	Esr1 (MGP_PahariEiJ_G0023705) #26	MGP_PahariEiJ_G0023704 #27	Armt1 (MGP_PahariEiJ_G0023703) #28	MGP_PahariEiJ_G0023702	Zbtb2 (MGP_PahariEiJ_G0023701) #30	Akap12 (MGP_PahariEiJ_G0023700)	Mthfd1l (MGP_PahariEiJ_G0023699) #31	Plekhg1 (MGP_PahariEiJ_G0023698) #32	Iyd (MGP_PahariEiJ_G0023697) #33	Ppp1r14c (MGP_PahariEiJ_G0023696) #34	Rrp1b (MGP_PahariEiJ_G0023695)
Rat	MODERN SPECIES		Arid1b (ENSRNOG00000017030) #11	ENSRNOG00000064039	Nox3 (ENSRNOG00000016490) #12	Cldn20 (ENSRNOG00000023531)	Tfb1m (ENSRNOG00000056223) #13	Tiam2 (ENSRNOG00000016728) #14	Scaf8 (ENSRNOG00000016919) #15	AABR07001435.1 (ENSRNOG00000004144)	Cnksr3 (ENSRNOG00000018052) #17	Ipcef1 (ENSRNOG00000018163) #18	Oprm1 (ENSRNOG00000018191) #19	ENSRNOG00000070385	AABR07001408.1 (ENSRNOG00000033265)	Rgs17 (ENSRNOG00000018690) #20	Mtrf1l (ENSRNOG00000018773) #21	Fbxo5 (ENSRNOG00000024077) #22	Vip (ENSRNOG00000018808) #23	Myct1 (ENSRNOG00000018858) #24	Syne1 (ENSRNOG00000018960) #25	Esr1 (ENSRNOG00000019358) #26	Ccdc170 (ENSRNOG00000024280) #27	Armt1 (ENSRNOG00000019489) #28	Rmnd1 (ENSRNOG00000019501) #29	Zbtb2 (ENSRNOG00000019544) #30	Akap12 (ENSRNOG00000019549)	Mthfd1l (ENSRNOG00000019582) #31	Plekhg1 (ENSRNOG00000016011) #32	Iyd (ENSRNOG00000016286) #33	Ppp1r14c (ENSRNOG00000016368) #34	AABR07001348.1 (ENSRNOG00000023081)	ENSRNOG00000070838
Upper Galilee mountains blind mole rat	MODERN SPECIES	1702									ENSNGAG00000010422	Scaf8 (ENSNGAG00000012332) #15	Cnksr3 (ENSNGAG00000015876) #17	Ipcef1 (ENSNGAG00000019303) #18	Oprm1 (ENSNGAG00000007044) #19	Rgs17 (ENSNGAG00000020948) #20	Mtrf1l (ENSNGAG00000021373) #21	Fbxo5 (ENSNGAG00000015908) #22	Vip (ENSNGAG00000022783) #23	Myct1 (ENSNGAG00000014265) #24	ENSNGAG00000015778 #25
Lesser Egyptian jerboa	MODERN SPECIES	44	Snx9 (ENSJJAG00000022587)	Zdhhc14 (ENSJJAG00000010246) #9	Tmem242 (ENSJJAG00000010583) #10	Arid1b (ENSJJAG00000023167) #11	Nox3 (ENSJJAG00000020165) #12	Tfb1m (ENSJJAG00000022171) #13	Tiam2 (ENSJJAG00000022310) #14	Scaf8 (ENSJJAG00000020480) #15	ENSJJAG00000012164	Cnksr3 (ENSJJAG00000023905) #17	ENSJJAG00000012246	Oprm1 (ENSJJAG00000024159) #19	Ipcef1 (ENSJJAG00000001014) #18	Rgs17 (ENSJJAG00000009873) #20	Mtrf1l (ENSJJAG00000024141) #21	Fbxo5 (ENSJJAG00000006490) #22	ENSJJAG00000005271	Vip (ENSJJAG00000018682) #23	Myct1 (ENSJJAG00000022731) #24	Syne1 (ENSJJAG00000014032) #25	ENSJJAG00000010411 #26	Esr1 (ENSJJAG00000015406) #26	ENSJJAG00000011473 #27	ENSJJAG00000015720 ##28	Rmnd1 (ENSJJAG00000008798) #29	Zbtb2 (ENSJJAG00000016308) #30	Akap12 (ENSJJAG00000021521)	Mthfd1l (ENSJJAG00000014266) #31	Plekhg1 (ENSJJAG00000023794) #32	ENSJJAG00000024322 #33	Ppp1r14c (ENSJJAG00000020290) #34
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00940000161275 #36
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00940000161275 #36
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Long-tailed chinchilla	MODERN SPECIES	146	SNX9 (ENSCLAG00000007699)	ZDHHC14 (ENSCLAG00000008670) #9	TMEM242 (ENSCLAG00000008760) #10	ARID1B (ENSCLAG00000009054) #11	NOX3 (ENSCLAG00000010279) #12	TFB1M (ENSCLAG00000004500) #13	TIAM2 (ENSCLAG00000004676) #14	SCAF8 (ENSCLAG00000004910) #15	CNKSR3 (ENSCLAG00000005496) #17	IPCEF1 (ENSCLAG00000005711) #18	OPRM1 (ENSCLAG00000003007) #19	ENSCLAG00000003114	RGS17 (ENSCLAG00000003266) #20	MTRF1L (ENSCLAG00000003779) #21	ENSCLAG00000003820	FBXO5 (ENSCLAG00000003927) #22	ENSCLAG00000004035	VIP (ENSCLAG00000004151) #23	MYCT1 (ENSCLAG00000004202) #24	ENSCLAG00000002479 #25	ENSCLAG00000002568	ENSCLAG00000002772 #25	ESR1 (ENSCLAG00000003026) #26	CCDC170 (ENSCLAG00000003105) #27	ARMT1 (ENSCLAG00000003161) #28	ENSCLAG00000003248	ZBTB2 (ENSCLAG00000003435) #30	AKAP12 (ENSCLAG00000003496)	MTHFD1L (ENSCLAG00000003603) #31	PLEKHG1 (ENSCLAG00000004103) #32	IYD (ENSCLAG00000002712) #33
Guinea pig	MODERN SPECIES	41	SERAC1 (ENSCPOG00000011203)	SYNJ2 (ENSCPOG00000009144)	SNX9 (ENSCPOG00000007921)	ZDHHC14 (ENSCPOG00000038809) #9	TMEM242 (ENSCPOG00000036571) #10	ARID1B (ENSCPOG00000031246) #11	NOX3 (ENSCPOG00000001003) #12	CLDN20 (ENSCPOG00000031831)	TFB1M (ENSCPOG00000030422) #13	TIAM2 (ENSCPOG00000009654) #14	ENSCPOG00000022216 #15	CNKSR3 (ENSCPOG00000039022) #17	IPCEF1 (ENSCPOG00000003418) #18	OPRM1 (ENSCPOG00000008135) #19	RGS17 (ENSCPOG00000003312) #20	FBXO5 (ENSCPOG00000007680) #22	VIP (ENSCPOG00000002991) #23	MYCT1 (ENSCPOG00000036928) #24	ENSCPOG00000032322 #25	ENSCPOG00000008325	ENSCPOG00000039266 #25	ESR1 (ENSCPOG00000008317) #26	CCDC170 (ENSCPOG00000008222) #27	ARMT1 (ENSCPOG00000040489) #28	ENSCPOG00000005849	ZBTB2 (ENSCPOG00000034799) #30	AKAP12 (ENSCPOG00000005547)	MTHFD1L (ENSCPOG00000010056) #31	PLEKHG1 (ENSCPOG00000010045) #32	ENSCPOG00000035414	KIAA0408 (ENSCPOG00000020737)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		TFB1M (ENSHGLG00000002028) #13	CLDN20 (ENSHGLG00000019987)	TIAM2 (ENSHGLG00000002352) #14	ENSHGLG00000042832	SCAF8 (ENSHGLG00000003619) #15	ENSHGLG00000050628	ENSHGLG00000039109	CNKSR3 (ENSHGLG00000003681) #17	IPCEF1 (ENSHGLG00000004122) #18	Oprm1 (ENSHGLG00000005417) #19	ENSHGLG00000006115	ENSHGLG00000033230	RGS17 (ENSHGLG00000007180) #20	ENSHGLG00000003207 #21	ENSHGLG00000003375	FBXO5 (ENSHGLG00000003460) #22	ENSHGLG00000003666	VIP (ENSHGLG00000003764) #23	MYCT1 (ENSHGLG00000003966) #24	ENSHGLG00000004180 #25	ENSHGLG00000047622 #25	ENSHGLG00000041227	ENSHGLG00000005683 #25	ESR1 (ENSHGLG00000001873) #26	ENSHGLG00000016358	ENSHGLG00000046338	CCDC170 (ENSHGLG00000002356) #27	ARMT1 (ENSHGLG00000046933) #28	RMND1 (ENSHGLG00000006256) #29	ZBTB2 (ENSHGLG00000041496) #30	AKAP12 (ENSHGLG00000008686)
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000002100	ENSHGLG00000000784	ENSHGLG00000001957	ENSHGLG00000040150	ENSHGLG00000045137	ENSHGLG00000000688	ENSHGLG00000047507	ENSHGLG00000045873	ENSHGLG00000047504	RTTN (ENSHGLG00000017738)	ENSHGLG00000000780	ENSHGLG00000048215	ENSHGLG00000046795	ENSHGLG00000000334	ENSHGLG00000000388	ENSHGLG00000045031 #22	ENSHGLG00000025635	ENSHGLG00000002454	ENSHGLG00000049270	ENSHGLG00000044324	DSEL (ENSHGLG00000001302)	ENSHGLG00000035367	ENSHGLG00000044063	CDH19 (ENSHGLG00000001249)	CDH7 (ENSHGLG00000001169)	SERPINB8 (ENSHGLG00000050036)	SERPINB2 (ENSHGLG00000001127)	SERPINB7 (ENSHGLG00000002536)	SERPINB11 (ENSHGLG00000002502)	ENSHGLG00000002364	SERPINB4 (ENSHGLG00000035185)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT00940000161275 #36
Squirrel	MODERN SPECIES	89	TMEM242 (ENSSTOG00000021519) #10	ARID1B (ENSSTOG00000015979) #11	ENSSTOG00000031965	NOX3 (ENSSTOG00000000798) #12	CLDN20 (ENSSTOG00000000795)	TFB1M (ENSSTOG00000026264) #13	TIAM2 (ENSSTOG00000000784) #14	SCAF8 (ENSSTOG00000026043) #15	ENSSTOG00000029860	ENSSTOG00000025472	CNKSR3 (ENSSTOG00000029212) #17	IPCEF1 (ENSSTOG00000000419) #18	OPRM1 (ENSSTOG00000000418) #19	RGS17 (ENSSTOG00000009988) #20	MTRF1L (ENSSTOG00000009980) #21	FBXO5 (ENSSTOG00000029069) #22	VIP (ENSSTOG00000007656) #23	MYCT1 (ENSSTOG00000010644) #24	ENSSTOG00000034176 #25	ENSSTOG00000006796	ENSSTOG00000030302 #25	ESR1 (ENSSTOG00000006748) #26	CCDC170 (ENSSTOG00000013161) #27	ARMT1 (ENSSTOG00000013153) #28	RMND1 (ENSSTOG00000013141) #29	ZBTB2 (ENSSTOG00000021611) #30	AKAP12 (ENSSTOG00000029201)	MTHFD1L (ENSSTOG00000010921) #31	PLEKHG1 (ENSSTOG00000010912) #32	IYD (ENSSTOG00000002022) #33	PPP1R14C (ENSSTOG00000002019) #34
Arctic ground squirrel	MODERN SPECIES	219														RGS17 (ENSUPAG00010012932) #20	MTRF1L (ENSUPAG00010012945) #21	FBXO5 (ENSUPAG00010012958) #22	VIP (ENSUPAG00010012967) #23	MYCT1 (ENSUPAG00010012980) #24	SYNE1 (ENSUPAG00010012988) #25	ESR1 (ENSUPAG00010013233) #26	CCDC170 (ENSUPAG00010013267) #27	ARMT1 (ENSUPAG00010013297) #28	RMND1 (ENSUPAG00010013328) #29	ZBTB2 (ENSUPAG00010013345) #30	AKAP12 (ENSUPAG00010013348)	MTHFD1L (ENSUPAG00010013390) #31	PLEKHG1 (ENSUPAG00010013492) #32	IYD (ENSUPAG00010013543) #33	ENSUPAG00010013564 #34
Alpin marmot	MODERN SPECIES	2								SCAF8 (ENSMMMG00000004108) #15	ENSMMMG00000004079	CNKSR3 (ENSMMMG00000004049) #17	IPCEF1 (ENSMMMG00000003986) #18	OPRM1 (ENSMMMG00000003833) #19	ENSMMMG00000003794	RGS17 (ENSMMMG00000003762) #20	MTRF1L (ENSMMMG00000003749) #21	FBXO5 (ENSMMMG00000003740) #22	VIP (ENSMMMG00000003724) #23	MYCT1 (ENSMMMG00000003699) #24	ENSMMMG00000003653 #25	ENSMMMG00000003589	ENSMMMG00000003544 #25	ENSMMMG00000003497 #25	ESR1 (ENSMMMG00000003430) #26	CCDC170 (ENSMMMG00000003378) #27	ARMT1 (ENSMMMG00000003333) #28	RMND1 (ENSMMMG00000003297) #29	ZBTB2 (ENSMMMG00000003286) #30	AKAP12 (ENSMMMG00000003251)	MTHFD1L (ENSMMMG00000003062) #31	PLEKHG1 (ENSMMMG00000003011) #32	IYD (ENSMMMG00000002984) #33
Eurasian red squirrel	MODERN SPECIES	16	ZDHHC14 (ENSSVLG00005018722) #9	TMEM242 (ENSSVLG00005018773) #10	ARID1B (ENSSVLG00005018938) #11	ENSSVLG00005019380	ENSSVLG00005019405	NOX3 (ENSSVLG00005019493) #12	TFB1M (ENSSVLG00005019605) #13	CLDN20 (ENSSVLG00005019651)	TIAM2 (ENSSVLG00005019741) #14	SCAF8 (ENSSVLG00005019879) #15	CNKSR3 (ENSSVLG00005020289) #17	IPCEF1 (ENSSVLG00005020412) #18	OPRM1 (ENSSVLG00005020650) #19	RGS17 (ENSSVLG00005020849) #20	ENSSVLG00005020917 #21	FBXO5 (ENSSVLG00005021108) #22	ENSSVLG00005021174	VIP (ENSSVLG00005021260) #23	MYCT1 (ENSSVLG00005021349) #24	ENSSVLG00005021418 #25	ENSSVLG00005010938	ENSSVLG00005010970 #25	ENSSVLG00005011101 #25	ESR1 (ENSSVLG00005011518) #26	CCDC170 (ENSSVLG00005011680) #27	ARMT1 (ENSSVLG00005011814) #28	RMND1 (ENSSVLG00005011890) #29	ZBTB2 (ENSSVLG00005011964) #30	AKAP12 (ENSSVLG00005012004)	MTHFD1L (ENSSVLG00005012073) #31	PLEKHG1 (ENSSVLG00005012201) #32
Lagomorpha	ANCESTRAL SPECIES	64	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Rabbit	MODERN SPECIES	3	ENSOCUG00000031993	TMEM242 (ENSOCUG00000024736) #10	ARID1B (ENSOCUG00000008879) #11	NOX3 (ENSOCUG00000001440) #12	CLDN20 (ENSOCUG00000012158)	ENSOCUG00000036620	TFB1M (ENSOCUG00000012154) #13	ENSOCUG00000012137 #14	SCAF8 (ENSOCUG00000026063) #15	CNKSR3 (ENSOCUG00000009042) #17	ENSOCUG00000037750	IPCEF1 (ENSOCUG00000016038) #18	OPRM1 (ENSOCUG00000016025) #19	RGS17 (ENSOCUG00000021054) #20	ENSOCUG00000000063 #21	FBXO5 (ENSOCUG00000000061) #22	VIP (ENSOCUG00000000513) #23	MYCT1 (ENSOCUG00000017753) #24	ENSOCUG00000038464	SYNE1 (ENSOCUG00000023878) #25	ESR1 (ENSOCUG00000004829) #26	ENSOCUG00000022327	CCDC170 (ENSOCUG00000013530) #27	ENSOCUG00000036064	ARMT1 (ENSOCUG00000002519) #28	RMND1 (ENSOCUG00000002509) #29	ZBTB2 (ENSOCUG00000022931) #30	AKAP12 (ENSOCUG00000002673)	MTHFD1L (ENSOCUG00000002781) #31	PLEKHG1 (ENSOCUG00000016898) #32	IYD (ENSOCUG00000013408) #33
Pika	MODERN SPECIES	10163															RGS17 (ENSOPRG00000003799) #20	FBXO5 (ENSOPRG00000003783) #22
Tree shrew	MODERN SPECIES	425														RGS17 (ENSTBEG00000003623) #20	MTRF1L (ENSTBEG00000003131) #21	FBXO5 (ENSTBEG00000002168) #22
Primates	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00950000185143
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.f	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000167556.a	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.a.b.b.a	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT01050000244986.a.b.a.a	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.b.b.a.a.a.a.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Crab-eating macaque	MODERN SPECIES	14	NOX3 (ENSMFAG00000032154) #12	CLDN20 (ENSMFAG00000024948)	TFB1M (ENSMFAG00000031968) #13	TIAM2 (ENSMFAG00000000660) #14	ENSMFAG00000057036	SCAF8 (ENSMFAG00000032738) #15	ENSMFAG00000055745	CNKSR3 (ENSMFAG00000033880) #17	ENSMFAG00000058345	ENSMFAG00000060374	IPCEF1 (ENSMFAG00000045011) #18	OPRM1 (ENSMFAG00000002542) #19	ENSMFAG00000047203	RGS17 (ENSMFAG00000039353) #20	MTRF1L (ENSMFAG00000039727) #21	FBXO5 (ENSMFAG00000042214) #22	ENSMFAG00000051403	VIP (ENSMFAG00000040930) #23	MYCT1 (ENSMFAG00000055463) #24	ENSMFAG00000063235	ENSMFAG00000057221	ENSMFAG00000057449	SYNE1 (ENSMFAG00000037479) #25	ESR1 (ENSMFAG00000033966) #26	CCDC170 (ENSMFAG00000034314) #27	ENSMFAG00000035719 #28	RMND1 (ENSMFAG00000034583) #29	ZBTB2 (ENSMFAG00000031487) #30	AKAP12 (ENSMFAG00000039897)	ENSMFAG00000063226	ENSMFAG00000063261
Rhesus	MODERN SPECIES	14	ENSMMUG00000020351	ENSMMUG00000065345	NOX3 (ENSMMUG00000008762) #12	CLDN20 (ENSMMUG00000011172)	TFB1M (ENSMMUG00000011171) #13	TIAM2 (ENSMMUG00000011169) #14	ENSMMUG00000053117	SCAF8 (ENSMMUG00000015163) #15	ENSMMUG00000056312	CNKSR3 (ENSMMUG00000053073) #17	ENSMMUG00000055883	IPCEF1 (ENSMMUG00000009861) #18	OPRM1 (ENSMMUG00000022691) #19	RGS17 (ENSMMUG00000019078) #20	MTRF1L (ENSMMUG00000020178) #21	FBXO5 (ENSMMUG00000019076) #22	ENSMMUG00000058069	VIP (ENSMMUG00000019074) #23	MYCT1 (ENSMMUG00000019073) #24	SYNE1 (ENSMMUG00000019048) #25	ESR1 (ENSMMUG00000019045) #26	CCDC170 (ENSMMUG00000018346) #27	ARMT1 (ENSMMUG00000060940) #28	RMND1 (ENSMMUG00000018342) #29	ENSMMUG00000050174	ZBTB2 (ENSMMUG00000029475) #30	ENSMMUG00000058018	AKAP12 (ENSMMUG00000023265)	MTHFD1L (ENSMMUG00000019774) #31	PLEKHG1 (ENSMMUG00000019772) #32	IYD (ENSMMUG00000010802) #33
Pig-tailed macaque	MODERN SPECIES	152	ENSMNEG00000044073	SAXO1 (ENSMNEG00000033883)	RRAGA (ENSMNEG00000019531)	HAUS6 (ENSMNEG00000034583)	ENSMNEG00000028839	DENND4C (ENSMNEG00000042842)	ENSMNEG00000039493	ACER2 (ENSMNEG00000044407)	ENSMNEG00000032955	ENSMNEG00000035988	ENSMNEG00000018647	ENSMNEG00000045351	SLC24A2 (ENSMNEG00000031804)	RGS17 (ENSMNEG00000039093) #20	ENSMNEG00000030044 #21	FBXO5 (ENSMNEG00000036254) #22	VIP (ENSMNEG00000027106) #23	MYCT1 (ENSMNEG00000044362) #24	SYNE1 (ENSMNEG00000030564) #25	ESR1 (ENSMNEG00000033178) #26	CCDC170 (ENSMNEG00000021323) #27	ARMT1 (ENSMNEG00000027559) #28	RMND1 (ENSMNEG00000039525) #29	ZBTB2 (ENSMNEG00000043530) #30	AKAP12 (ENSMNEG00000037368)	ENSMNEG00000027441	ENSMNEG00000028201	MTHFD1L (ENSMNEG00000039466) #31	PLEKHG1 (ENSMNEG00000027854) #32	IYD (ENSMNEG00000035661) #33	PPP1R14C (ENSMNEG00000029660) #34
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Cercopithecinae_d	ANCESTRAL SPECIES	35	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Sooty mangabey	MODERN SPECIES	139	ENSCATG00000041391	ENSCATG00000027907	TMEM242 (ENSCATG00000035861) #10	ARID1B (ENSCATG00000037677) #11	ENSCATG00000020443	NOX3 (ENSCATG00000020816) #12	TFB1M (ENSCATG00000009009) #13	TIAM2 (ENSCATG00000030651) #14	SCAF8 (ENSCATG00000035361) #15	ENSCATG00000037387	CNKSR3 (ENSCATG00000030116) #17	IPCEF1 (ENSCATG00000034082) #18	OPRM1 (ENSCATG00000029597) #19	RGS17 (ENSCATG00000040739) #20	ENSCATG00000035276 #21	FBXO5 (ENSCATG00000045339) #22	VIP (ENSCATG00000032792) #23	MYCT1 (ENSCATG00000032119) #24	SYNE1 (ENSCATG00000040903) #25	ESR1 (ENSCATG00000030182) #26	CCDC170 (ENSCATG00000031654) #27	ARMT1 (ENSCATG00000043831) #28	RMND1 (ENSCATG00000032389) #29	ZBTB2 (ENSCATG00000031949) #30	AKAP12 (ENSCATG00000029672)	ENSCATG00000042437	ENSCATG00000041374	MTHFD1L (ENSCATG00000042071) #31	PLEKHG1 (ENSCATG00000037764) #32	IYD (ENSCATG00000043048) #33	PPP1R14C (ENSCATG00000033340) #34
Drill	MODERN SPECIES	1219														RGS17 (ENSMLEG00000012630) #20	ENSMLEG00000034354 #21	FBXO5 (ENSMLEG00000031230) #22	VIP (ENSMLEG00000040460) #23	MYCT1 (ENSMLEG00000024555) #24	SYNE1 (ENSMLEG00000042879) #25	ESR1 (ENSMLEG00000040148) #26
Olive baboon	MODERN SPECIES	16	NOX3 (ENSPANG00000022192) #12	ENSPANG00000046477 #13	ENSPANG00000049294	ENSPANG00000017324 #14	ENSPANG00000048153	ENSPANG00000050814	SCAF8 (ENSPANG00000017489) #15	ENSPANG00000048571	CNKSR3 (ENSPANG00000005834) #17	IPCEF1 (ENSPANG00000023119) #18	ENSPANG00000044645	OPRM1 (ENSPANG00000005833) #19	ENSPANG00000050384	RGS17 (ENSPANG00000022190) #20	MTRF1L (ENSPANG00000033150) #21	FBXO5 (ENSPANG00000046787) #22	VIP (ENSPANG00000004077) #23	MYCT1 (ENSPANG00000026234) #24	SYNE1 (ENSPANG00000024958) #25	ESR1 (ENSPANG00000020729) #26	ENSPANG00000050683	CCDC170 (ENSPANG00000001110) #27	ARMT1 (ENSPANG00000006927) #28	RMND1 (ENSPANG00000018391) #29	ZBTB2 (ENSPANG00000046901) #30	AKAP12 (ENSPANG00000018393)	MTHFD1L (ENSPANG00000024767) #31	PLEKHG1 (ENSPANG00000009444) #32	ENSPANG00000038252	IYD (ENSPANG00000026300) #33	PPP1R14C (ENSPANG00000048658) #34
Vervet Monkey	MODERN SPECIES	4	SYNJ2 (ENSCSAG00000013130)	SNX9 (ENSCSAG00000013174)	ZDHHC14 (ENSCSAG00000013202) #9	TMEM242 (ENSCSAG00000013217) #10	ARID1B (ENSCSAG00000013230) #11	NOX3 (ENSCSAG00000013249) #12	CLDN20 (ENSCSAG00000018982)	TFB1M (ENSCSAG00000013259) #13	TIAM2 (ENSCSAG00000013369) #14	SCAF8 (ENSCSAG00000013430) #15	CNKSR3 (ENSCSAG00000013444) #17	IPCEF1 (ENSCSAG00000013457) #18	OPRM1 (ENSCSAG00000013480) #19	RGS17 (ENSCSAG00000013490) #20	MTRF1L (ENSCSAG00000013511) #21	FBXO5 (ENSCSAG00000013521) #22	VIP (ENSCSAG00000013530) #23	MYCT1 (ENSCSAG00000013534) #24	ENSCSAG00000018981	SYNE1 (ENSCSAG00000014028) #25	ESR1 (ENSCSAG00000014236) #26	CCDC170 (ENSCSAG00000014238) #27	ARMT1 (ENSCSAG00000014244) #28	RMND1 (ENSCSAG00000014250) #29	ZBTB2 (ENSCSAG00000014259) #30	AKAP12 (ENSCSAG00000014270)	ENSCSAG00000014290	MTHFD1L (ENSCSAG00000014394) #31	PLEKHG1 (ENSCSAG00000014433) #32	IYD (ENSCSAG00000014444) #33	PPP1R14C (ENSCSAG00000014450) #34
Rhinopithecus	ANCESTRAL SPECIES	855														ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22
Golden snub-nosed monkey	MODERN SPECIES	3259														RGS17 (ENSRROG00000035688) #20	ENSRROG00000027753 #21	FBXO5 (ENSRROG00000026058) #22
Black snub-nosed monkey	MODERN SPECIES	384														RGS17 (ENSRBIG00000035849) #20	ENSRBIG00000016086 #21	FBXO5 (ENSRBIG00000040080) #22
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000163242.f.a	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h
Pan	ANCESTRAL SPECIES	5	ENSGT00940000156483 #9	ENSGT00940000154860.r	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00390000005534.b.b.c.b.a.a.b.a.a.d.b.b	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000154295.y.b.f	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Bonobo	MODERN SPECIES	19	TFB1M (ENSPPAG00000030834) #13	TIAM2 (ENSPPAG00000043920) #14	SCAF8 (ENSPPAG00000039826) #15	GTF2H5 (ENSPPAG00000042615)	SERAC1 (ENSPPAG00000032315)	SYNJ2 (ENSPPAG00000028831)	SNX9 (ENSPPAG00000028633)	ZDHHC14 (ENSPPAG00000026904) #9	ENSPPAG00000018260 #10	CNKSR3 (ENSPPAG00000040246) #17	ENSPPAG00000038809 #18	OPRM1 (ENSPPAG00000041853) #19	ENSPPAG00000039443	RGS17 (ENSPPAG00000036399) #20	MTRF1L (ENSPPAG00000031251) #21	FBXO5 (ENSPPAG00000017794) #22	VIP (ENSPPAG00000031048) #23	MYCT1 (ENSPPAG00000028230) #24	SYNE1 (ENSPPAG00000027499) #25	ESR1 (ENSPPAG00000025747) #26	CCDC170 (ENSPPAG00000043973) #27	ARMT1 (ENSPPAG00000030485) #28	RMND1 (ENSPPAG00000034708) #29	ZBTB2 (ENSPPAG00000033109) #30	AKAP12 (ENSPPAG00000027286)	ENSPPAG00000029607	MTHFD1L (ENSPPAG00000034031) #31	ENSPPAG00000038707	PLEKHG1 (ENSPPAG00000040411) #32	IYD (ENSPPAG00000035207) #33	ENSPPAG00000038058 #34
Chimpanzee	MODERN SPECIES	19	ZDHHC14 (ENSPTRG00000018736) #9	ENSPTRG00000048763	TMEM242 (ENSPTRG00000043235) #10	ARID1B (ENSPTRG00000018733) #11	NOX3 (ENSPTRG00000018732) #12	CLDN20 (ENSPTRG00000018731)	TFB1M (ENSPTRG00000018730) #13	TIAM2 (ENSPTRG00000034266) #14	SCAF8 (ENSPTRG00000018727) #15	CNKSR3 (ENSPTRG00000018725) #17	IPCEF1 (ENSPTRG00000018724) #18	OPRM1 (ENSPTRG00000018723) #19	ENSPTRG00000034202	RGS17 (ENSPTRG00000029367) #20	MTRF1L (ENSPTRG00000018722) #21	FBXO5 (ENSPTRG00000018721) #22	VIP (ENSPTRG00000018720) #23	MYCT1 (ENSPTRG00000018719) #24	SYNE1 (ENSPTRG00000018717) #25	ESR1 (ENSPTRG00000018716) #26	CCDC170 (ENSPTRG00000018715) #27	ARMT1 (ENSPTRG00000018714) #28	RMND1 (ENSPTRG00000018713) #29	ZBTB2 (ENSPTRG00000018712) #30	AKAP12 (ENSPTRG00000018711)	ENSPTRG00000051736	ENSPTRG00000049112	ENSPTRG00000018710 #31	ENSPTRG00000044725	PLEKHG1 (ENSPTRG00000018709) #32	IYD (ENSPTRG00000051321) #33
Human	MODERN SPECIES	18	SNX9 (ENSG00000130340)	ZDHHC14 (ENSG00000175048) #9	TMEM242 (ENSG00000215712) #10	ARID1B (ENSG00000049618) #11	NOX3 (ENSG00000074771) #12	CLDN20 (ENSG00000171217)	TFB1M (ENSG00000029639) #13	TIAM2 (ENSG00000146426) #14	SCAF8 (ENSG00000213079) #15	CNKSR3 (ENSG00000153721) #17	ENSG00000288520	IPCEF1 (ENSG00000074706) #18	OPRM1 (ENSG00000112038) #19	RGS17 (ENSG00000091844) #20	MTRF1L (ENSG00000112031) #21	FBXO5 (ENSG00000112029) #22	VIP (ENSG00000146469) #23	MYCT1 (ENSG00000120279) #24	SYNE1 (ENSG00000131018) #25	ESR1 (ENSG00000091831) #26	CCDC170 (ENSG00000120262) #27	ARMT1 (ENSG00000146476) #28	RMND1 (ENSG00000155906) #29	ZBTB2 (ENSG00000181472) #30	AKAP12 (ENSG00000131016)	MTHFD1L (ENSG00000120254) #31	PLEKHG1 (ENSG00000120278) #32	IYD (ENSG00000009765) #33	PPP1R14C (ENSG00000198729) #34	ULBP3 (ENSG00000131019)	RAET1L (ENSG00000155918)
Gorilla	MODERN SPECIES	19	ZDHHC14 (ENSGGOG00000012728) #9	ENSGGOG00000024408	ENSGGOG00000027135	ENSGGOG00000002116 #10	ARID1B (ENSGGOG00000011723) #11	NOX3 (ENSGGOG00000015724) #12	CLDN20 (ENSGGOG00000000295)	TFB1M (ENSGGOG00000012189) #13	TIAM2 (ENSGGOG00000012161) #14	SCAF8 (ENSGGOG00000008645) #15	CNKSR3 (ENSGGOG00000001228) #17	IPCEF1 (ENSGGOG00000015698) #18	OPRM1 (ENSGGOG00000024312) #19	RGS17 (ENSGGOG00000026033) #20	MTRF1L (ENSGGOG00000022451) #21	FBXO5 (ENSGGOG00000001606) #22	VIP (ENSGGOG00000028135) #23	ENSGGOG00000042786 #24	SYNE1 (ENSGGOG00000014892) #25	ESR1 (ENSGGOG00000009678) #26	CCDC170 (ENSGGOG00000004497) #27	ARMT1 (ENSGGOG00000023947) #28	RMND1 (ENSGGOG00000007148) #29	ZBTB2 (ENSGGOG00000010529) #30	AKAP12 (ENSGGOG00000024737)	MTHFD1L (ENSGGOG00000003642) #31	PLEKHG1 (ENSGGOG00000014887) #32	IYD (ENSGGOG00000036276) #33	ENSGGOG00000026573 #34	ULBP3 (ENSGGOG00000003891)	ENSGGOG00000007925
Orangutan	MODERN SPECIES	19	ENSPPYG00000035657	SNX9 (ENSPPYG00000017129)	ZDHHC14 (ENSPPYG00000017128) #9	TMEM242 (ENSPPYG00000017271) #10	ARID1B (ENSPPYG00000017126) #11	NOX3 (ENSPPYG00000017125) #12	CLDN20 (ENSPPYG00000017124)	TFB1M (ENSPPYG00000017123) #13	TIAM2 (ENSPPYG00000017122) #14	SCAF8 (ENSPPYG00000017121) #15	CNKSR3 (ENSPPYG00000017120) #17	IPCEF1 (ENSPPYG00000017119) #18	OPRM1 (ENSPPYG00000029500) #19	RGS17 (ENSPPYG00000017118) #20	MTRF1L (ENSPPYG00000017117) #21	FBXO5 (ENSPPYG00000017116) #22	VIP (ENSPPYG00000017115) #23	MYCT1 (ENSPPYG00000017114) #24	SYNE1 (ENSPPYG00000017113) #25	ESR1 (ENSPPYG00000017112) #26	CCDC170 (ENSPPYG00000017111) #27	ENSPPYG00000017110	ARMT1 (ENSPPYG00000017109) #28	RMND1 (ENSPPYG00000017108) #29	ZBTB2 (ENSPPYG00000017107) #30	AKAP12 (ENSPPYG00000017106)	MTHFD1L (ENSPPYG00000017105) #31	PLEKHG1 (ENSPPYG00000017104) #32	IYD (ENSPPYG00000017103) #33	PPP1R14C (ENSPPYG00000017102) #34	ULBP3 (ENSPPYG00000017268)
Gibbon	MODERN SPECIES	18	ZDHHC14 (ENSNLEG00000034615) #9	ENSNLEG00000028005	ENSNLEG00000035225	TMEM242 (ENSNLEG00000010676) #10	ENSNLEG00000015656 #11	NOX3 (ENSNLEG00000015640) #12	CLDN20 (ENSNLEG00000015639)	TFB1M (ENSNLEG00000034352) #13	TIAM2 (ENSNLEG00000015541) #14	SCAF8 (ENSNLEG00000015509) #15	CNKSR3 (ENSNLEG00000015493) #17	IPCEF1 (ENSNLEG00000015476) #18	OPRM1 (ENSNLEG00000015467) #19	RGS17 (ENSNLEG00000015461) #20	MTRF1L (ENSNLEG00000015450) #21	FBXO5 (ENSNLEG00000015443) #22	VIP (ENSNLEG00000015432) #23	ENSNLEG00000035305 #24	SYNE1 (ENSNLEG00000015419) #25	ESR1 (ENSNLEG00000015408) #26	CCDC170 (ENSNLEG00000015396) #27	ARMT1 (ENSNLEG00000015395) #28	RMND1 (ENSNLEG00000015387) #29	ZBTB2 (ENSNLEG00000015384) #30	AKAP12 (ENSNLEG00000015379)	ENSNLEG00000035803	ENSNLEG00000035383	MTHFD1L (ENSNLEG00000015374) #31	PLEKHG1 (ENSNLEG00000015370) #32	IYD (ENSNLEG00000015363) #33	PPP1R14C (ENSNLEG00000015360) #34
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.f	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.f	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b
Cebidae_a	ANCESTRAL SPECIES	26	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.f	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b
Capuchin	MODERN SPECIES	6	SNX9 (ENSCCAG00000019868)	ZDHHC14 (ENSCCAG00000036394) #9	TMEM242 (ENSCCAG00000032700) #10	ENSCCAG00000025706	ARID1B (ENSCCAG00000027348) #11	NOX3 (ENSCCAG00000030330) #12	TFB1M (ENSCCAG00000015250) #13	CLDN20 (ENSCCAG00000002679)	TIAM2 (ENSCCAG00000023099) #14	SCAF8 (ENSCCAG00000024952) #15	CNKSR3 (ENSCCAG00000022570) #17	IPCEF1 (ENSCCAG00000036029) #18	OPRM1 (ENSCCAG00000025874) #19	RGS17 (ENSCCAG00000030080) #20	MTRF1L (ENSCCAG00000035144) #21	FBXO5 (ENSCCAG00000035526) #22	VIP (ENSCCAG00000034128) #23	MYCT1 (ENSCCAG00000031493) #24	SYNE1 (ENSCCAG00000034147) #25	ESR1 (ENSCCAG00000030983) #26	ENSCCAG00000023199	ENSCCAG00000036007	CCDC170 (ENSCCAG00000035936) #27	ARMT1 (ENSCCAG00000027013) #28	RMND1 (ENSCCAG00000036014) #29	ZBTB2 (ENSCCAG00000029241) #30	AKAP12 (ENSCCAG00000030534)	MTHFD1L (ENSCCAG00000033752) #31	PLEKHG1 (ENSCCAG00000027481) #32	IYD (ENSCCAG00000036983) #33
Bolivian squirrel monkey	MODERN SPECIES	101	ENSSBOG00000028951	ZDHHC14 (ENSSBOG00000025348) #9	TMEM242 (ENSSBOG00000035724) #10	ARID1B (ENSSBOG00000026093) #11	NOX3 (ENSSBOG00000026568) #12	CLDN20 (ENSSBOG00000018025)	TFB1M (ENSSBOG00000008663) #13	TIAM2 (ENSSBOG00000035015) #14	SCAF8 (ENSSBOG00000027023) #15	ENSSBOG00000030903	CNKSR3 (ENSSBOG00000032255) #17	IPCEF1 (ENSSBOG00000035077) #18	OPRM1 (ENSSBOG00000026674) #19	RGS17 (ENSSBOG00000001068) #20	MTRF1L (ENSSBOG00000024984) #21	FBXO5 (ENSSBOG00000022349) #22	VIP (ENSSBOG00000027960) #23	MYCT1 (ENSSBOG00000027156) #24	SYNE1 (ENSSBOG00000023809) #25	ENSSBOG00000033348	ENSSBOG00000027653
Marmoset	MODERN SPECIES	16	ARID1B (ENSCJAG00000012474) #11	ENSCJAG00000077773	NOX3 (ENSCJAG00000012516) #12	CLDN20 (ENSCJAG00000054130)	TFB1M (ENSCJAG00000012540) #13	TIAM2 (ENSCJAG00000012559) #14	SCAF8 (ENSCJAG00000012631) #15	CNKSR3 (ENSCJAG00000012720) #17	ENSCJAG00000081721	IPCEF1 (ENSCJAG00000012736) #18	OPRM1 (ENSCJAG00000012747) #19	ENSCJAG00000078595	ENSCJAG00000084075	RGS17 (ENSCJAG00000012783) #20	MTRF1L (ENSCJAG00000044179) #21	FBXO5 (ENSCJAG00000012799) #22	VIP (ENSCJAG00000012816) #23	ENSCJAG00000083311	ENSCJAG00000073970	SYNE1 (ENSCJAG00000012842) #25	ESR1 (ENSCJAG00000013293) #26	CCDC170 (ENSCJAG00000013339) #27	ARMT1 (ENSCJAG00000013343) #28	RMND1 (ENSCJAG00000013350) #29	ZBTB2 (ENSCJAG00000057010) #30	AKAP12 (ENSCJAG00000013402)	MTHFD1L (ENSCJAG00000013404) #31	PLEKHG1 (ENSCJAG00000013414) #32	IYD (ENSCJAG00000013438) #33	ENSCJAG00000077421 #34	ENSCJAG00000084847
Mas night monkey	MODERN SPECIES	265	ENSANAG00000022533	TMEM242 (ENSANAG00000021582) #10	ARID1B (ENSANAG00000031205) #11	NOX3 (ENSANAG00000002866) #12	CLDN20 (ENSANAG00000016075)	TFB1M (ENSANAG00000021469) #13	TIAM2 (ENSANAG00000025426) #14	ENSANAG00000014514	SCAF8 (ENSANAG00000036184) #15	ENSANAG00000029661	CNKSR3 (ENSANAG00000026546) #17	IPCEF1 (ENSANAG00000025255) #18	OPRM1 (ENSANAG00000036165) #19	RGS17 (ENSANAG00000020543) #20	MTRF1L (ENSANAG00000007078) #21	FBXO5 (ENSANAG00000000307) #22	ENSANAG00000026755	VIP (ENSANAG00000033466) #23	MYCT1 (ENSANAG00000028766) #24	SYNE1 (ENSANAG00000028713) #25	ENSANAG00000032083	ESR1 (ENSANAG00000033920) #26	CCDC170 (ENSANAG00000034546) #27	ARMT1 (ENSANAG00000027746) #28	RMND1 (ENSANAG00000029850) #29	ZBTB2 (ENSANAG00000035402) #30	AKAP12 (ENSANAG00000033578)	ENSANAG00000028041	MTHFD1L (ENSANAG00000020601) #31	PLEKHG1 (ENSANAG00000027450) #32	IYD (ENSANAG00000029610) #33
Tarsier	MODERN SPECIES	6778														RGS17 (ENSTSYG00000032179) #20	MTRF1L (ENSTSYG00000003079) #21	FBXO5 (ENSTSYG00000012477) #22
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a
Mouse lemur	MODERN SPECIES	28	SNX9 (ENSMICG00000008656)	ZDHHC14 (ENSMICG00000008645) #9	TMEM242 (ENSMICG00000031602) #10	ARID1B (ENSMICG00000008595) #11	ENSMICG00000036677	NOX3 (ENSMICG00000011586) #12	TFB1M (ENSMICG00000045849) #13	TIAM2 (ENSMICG00000011537) #14	ENSMICG00000035668	SCAF8 (ENSMICG00000028965) #15	CNKSR3 (ENSMICG00000002819) #17	IPCEF1 (ENSMICG00000044930) #18	OPRM1 (ENSMICG00000030084) #19	RGS17 (ENSMICG00000003816) #20	MTRF1L (ENSMICG00000003811) #21	FBXO5 (ENSMICG00000003809) #22	ENSMICG00000032018	VIP (ENSMICG00000035122) #23	MYCT1 (ENSMICG00000036362) #24	ENSMICG00000042037	SYNE1 (ENSMICG00000007620) #25	ESR1 (ENSMICG00000007592) #26	CCDC170 (ENSMICG00000029885) #27	ARMT1 (ENSMICG00000047928) #28	RMND1 (ENSMICG00000010583) #29	ZBTB2 (ENSMICG00000027366) #30	AKAP12 (ENSMICG00000034625)	MTHFD1L (ENSMICG00000004610) #31	PLEKHG1 (ENSMICG00000004593) #32	IYD (ENSMICG00000004582) #33	ENSMICG00000026491
Lemuriformes_a	ANCESTRAL SPECIES	28	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a
Greater bamboo lemur	MODERN SPECIES	662	SNX9 (ENSPSMG00000021776)	ZDHHC14 (ENSPSMG00000021714) #9	TMEM242 (ENSPSMG00000021698) #10	ARID1B (ENSPSMG00000021663) #11	ENSPSMG00000021609	NOX3 (ENSPSMG00000021601) #12	CLDN20 (ENSPSMG00000021575)	TFB1M (ENSPSMG00000021571) #13	TIAM2 (ENSPSMG00000021535) #14	SCAF8 (ENSPSMG00000021483) #15	CNKSR3 (ENSPSMG00000021374) #17	OPRM1 (ENSPSMG00000021308) #19	ENSPSMG00000021248	RGS17 (ENSPSMG00000021243) #20	MTRF1L (ENSPSMG00000021227) #21	FBXO5 (ENSPSMG00000021196) #22	VIP (ENSPSMG00000021172) #23	MYCT1 (ENSPSMG00000021158) #24	SYNE1 (ENSPSMG00000021005) #25	ESR1 (ENSPSMG00000020487) #26	ENSPSMG00000020377	CCDC170 (ENSPSMG00000020376) #27	ARMT1 (ENSPSMG00000020363) #28	RMND1 (ENSPSMG00000020327) #29	ZBTB2 (ENSPSMG00000020305) #30	AKAP12 (ENSPSMG00000020300)	MTHFD1L (ENSPSMG00000020197) #31	PLEKHG1 (ENSPSMG00000020047) #32	IYD (ENSPSMG00000020030) #33	PPP1R14C (ENSPSMG00000019988) #34	ENSPSMG00000019973
Coquerels sifaka	MODERN SPECIES	358	SYNJ2 (ENSPCOG00000026910)	SNX9 (ENSPCOG00000027841)	ZDHHC14 (ENSPCOG00000018191) #9	TMEM242 (ENSPCOG00000007559) #10	ARID1B (ENSPCOG00000027362) #11	NOX3 (ENSPCOG00000016698) #12	TFB1M (ENSPCOG00000028453) #13	TIAM2 (ENSPCOG00000018772) #14	SCAF8 (ENSPCOG00000002067) #15	CNKSR3 (ENSPCOG00000015375) #17	ENSPCOG00000023906	IPCEF1 (ENSPCOG00000021134) #18	OPRM1 (ENSPCOG00000018832) #19	RGS17 (ENSPCOG00000016664) #20	MTRF1L (ENSPCOG00000008406) #21	FBXO5 (ENSPCOG00000016445) #22	MYCT1 (ENSPCOG00000007366) #24	SYNE1 (ENSPCOG00000022140) #25	ESR1 (ENSPCOG00000023782) #26	CCDC170 (ENSPCOG00000027420) #27
Bushbaby	MODERN SPECIES	241				TMEM242 (ENSOGAG00000007646) #10	ENSOGAG00000009749 #11	NOX3 (ENSOGAG00000010573) #12	TFB1M (ENSOGAG00000011681) #13	CLDN20 (ENSOGAG00000027759)	TIAM2 (ENSOGAG00000011674) #14	SCAF8 (ENSOGAG00000034223) #15	CNKSR3 (ENSOGAG00000011512) #17	IPCEF1 (ENSOGAG00000011510) #18	OPRM1 (ENSOGAG00000011506) #19	RGS17 (ENSOGAG00000006526) #20	MTRF1L (ENSOGAG00000006521) #21	FBXO5 (ENSOGAG00000006519) #22	VIP (ENSOGAG00000006513) #23	MYCT1 (ENSOGAG00000005357) #24	SYNE1 (ENSOGAG00000012587) #25	ESR1 (ENSOGAG00000012580) #26	CCDC170 (ENSOGAG00000006312) #27	ARMT1 (ENSOGAG00000010684) #28	RMND1 (ENSOGAG00000005263) #29	ZBTB2 (ENSOGAG00000005262) #30	AKAP12 (ENSOGAG00000011277)	MTHFD1L (ENSOGAG00000011273) #31	PLEKHG1 (ENSOGAG00000033661) #32	IYD (ENSOGAG00000006759) #33	PPP1R14C (ENSOGAG00000009514) #34	ENSOGAG00000025001
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Eulipotyphla	ANCESTRAL SPECIES	546														ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Common shrew	MODERN SPECIES	929														RGS17 (ENSSARG00000011103) #20	MTRF1L (ENSSARG00000011089) #21	FBXO5 (ENSSARG00000011060) #22
Hedgehog	MODERN SPECIES	12238																FBXO5 (ENSEEUG00000001811) #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Suina	ANCESTRAL SPECIES	18	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Chacoan peccary	MODERN SPECIES	58	SNX9 (ENSCWAG00000003804)	ZDHHC14 (ENSCWAG00000003840) #9	TMEM242 (ENSCWAG00000003899) #10	ARID1B (ENSCWAG00000004015) #11	NOX3 (ENSCWAG00000004615) #12	TFB1M (ENSCWAG00000004677) #13	CLDN20 (ENSCWAG00000004706)	TIAM2 (ENSCWAG00000004753) #14	ENSCWAG00000005054	SCAF8 (ENSCWAG00000005122) #15	CNKSR3 (ENSCWAG00000005331) #17	OPRM1 (ENSCWAG00000005403) #19	IPCEF1 (ENSCWAG00000005502) #18	RGS17 (ENSCWAG00000005553) #20	MTRF1L (ENSCWAG00000005591) #21	FBXO5 (ENSCWAG00000005639) #22	VIP (ENSCWAG00000005683) #23	MYCT1 (ENSCWAG00000005709) #24	SYNE1 (ENSCWAG00000005922) #25	ESR1 (ENSCWAG00000008426) #26	CCDC170 (ENSCWAG00000008566) #27	ARMT1 (ENSCWAG00000008701) #28	RMND1 (ENSCWAG00000008762) #29	ZBTB2 (ENSCWAG00000008811) #30	AKAP12 (ENSCWAG00000008834)	MTHFD1L (ENSCWAG00000000009) #31	PLEKHG1 (ENSCWAG00000000019) #32	IYD (ENSCWAG00000000052) #33	PPP1R14C (ENSCWAG00000000064) #34	ENSCWAG00000000084	ENSCWAG00000000130
Pig	MODERN SPECIES		ZDHHC14 (ENSSSCG00000035027) #9	ENSSSCG00000038527	TMEM242 (ENSSSCG00000060508) #10	ARID1B (ENSSSCG00000004064) #11	ENSSSCG00000051789	NOX3 (ENSSSCG00000004068) #12	TFB1M (ENSSSCG00000024361) #13	CLDN20 (ENSSSCG00000063189)	TIAM2 (ENSSSCG00000004065) #14	SCAF8 (ENSSSCG00000004070) #15	CNKSR3 (ENSSSCG00000004071) #17	IPCEF1 (ENSSSCG00000046319) #18	OPRM1 (ENSSSCG00000004074) #19	RGS17 (ENSSSCG00000004075) #20	MTRF1L (ENSSSCG00000004076) #21	FBXO5 (ENSSSCG00000004077) #22	VIP (ENSSSCG00000004078) #23	MYCT1 (ENSSSCG00000031536) #24	ENSSSCG00000004081 #25	ENSSSCG00000049158	ENSSSCG00000004082 #25	ESR1 (ENSSSCG00000025777) #26	ENSSSCG00000046251	CCDC170 (ENSSSCG00000004087) #27	ARMT1 (ENSSSCG00000004088) #28	RMND1 (ENSSSCG00000004089) #29	ZBTB2 (ENSSSCG00000004090) #30	AKAP12 (ENSSSCG00000031733)	MTHFD1L (ENSSSCG00000004092) #31	PLEKHG1 (ENSSSCG00000032778) #32	ENSSSCG00000040966
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a	ENSGT00950000185143
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a	ENSGT00950000185143
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT01010000228886	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT01010000228886	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00950000185143
Beluga whale	MODERN SPECIES	80	ZDHHC14 (ENSDLEG00000012658) #9	ENSDLEG00000012649	TMEM242 (ENSDLEG00000012634) #10	ARID1B (ENSDLEG00000012513) #11	NOX3 (ENSDLEG00000012479) #12	CLDN20 (ENSDLEG00000012472)	TFB1M (ENSDLEG00000012467) #13	TIAM2 (ENSDLEG00000012451) #14	SCAF8 (ENSDLEG00000012389) #15	CNKSR3 (ENSDLEG00000012362) #17	IPCEF1 (ENSDLEG00000012349) #18	OPRM1 (ENSDLEG00000012316) #19	ENSDLEG00000012302	RGS17 (ENSDLEG00000012267) #20	MTRF1L (ENSDLEG00000012260) #21	FBXO5 (ENSDLEG00000012221) #22	VIP (ENSDLEG00000012194) #23	MYCT1 (ENSDLEG00000012183) #24	SYNE1 (ENSDLEG00000010092) #25	ENSDLEG00000009813	ESR1 (ENSDLEG00000009792) #26	CCDC170 (ENSDLEG00000009713) #27	ARMT1 (ENSDLEG00000009691) #28	RMND1 (ENSDLEG00000009657) #29	ZBTB2 (ENSDLEG00000009640) #30	AKAP12 (ENSDLEG00000009611)	MTHFD1L (ENSDLEG00000009381) #31	PLEKHG1 (ENSDLEG00000009309) #32	IYD (ENSDLEG00000009156) #33	ENSDLEG00000009118 #34	ENSDLEG00000009098
Narwhal	MODERN SPECIES	301	SNX9 (ENSMMNG00015010588)	ZDHHC14 (ENSMMNG00015010553) #9	ENSMMNG00015010533	TMEM242 (ENSMMNG00015010509) #10	ARID1B (ENSMMNG00015010328) #11	NOX3 (ENSMMNG00015010259) #12	CLDN20 (ENSMMNG00015010248)	ENSMMNG00015010231 #13	TIAM2 (ENSMMNG00015010117) #14	SCAF8 (ENSMMNG00015009985) #15	CNKSR3 (ENSMMNG00015009927) #17	IPCEF1 (ENSMMNG00015009907) #18	OPRM1 (ENSMMNG00015009889) #19	RGS17 (ENSMMNG00015009868) #20	MTRF1L (ENSMMNG00015009848) #21	FBXO5 (ENSMMNG00015009826) #22	VIP (ENSMMNG00015009820) #23	MYCT1 (ENSMMNG00015009810) #24	SYNE1 (ENSMMNG00015009727) #25	ENSMMNG00015009668	ESR1 (ENSMMNG00015009658) #26	ARMT1 (ENSMMNG00015009647) #28	RMND1 (ENSMMNG00015009633) #29	ZBTB2 (ENSMMNG00015009627) #30	AKAP12 (ENSMMNG00015009623)	MTHFD1L (ENSMMNG00015009588) #31	PLEKHG1 (ENSMMNG00015009571) #32	IYD (ENSMMNG00015009560) #33	PPP1R14C (ENSMMNG00015009544) #34	ENSMMNG00015009542	LRP11 (ENSMMNG00015009513) #36
Vaquita	MODERN SPECIES	3	SNX9 (ENSPSNG00000020632)	ZDHHC14 (ENSPSNG00000020697) #9	TMEM242 (ENSPSNG00000020809) #10	ENSPSNG00000020849	ARID1B (ENSPSNG00000021058) #11	NOX3 (ENSPSNG00000021516) #12	ENSPSNG00000021564 #13	CLDN20 (ENSPSNG00000021584)	TIAM2 (ENSPSNG00000021646) #14	SCAF8 (ENSPSNG00000021822) #15	CNKSR3 (ENSPSNG00000021935) #17	IPCEF1 (ENSPSNG00000021988) #18	OPRM1 (ENSPSNG00000022034) #19	RGS17 (ENSPSNG00000022062) #20	MTRF1L (ENSPSNG00000022083) #21	FBXO5 (ENSPSNG00000022107) #22	VIP (ENSPSNG00000022117) #23	MYCT1 (ENSPSNG00000022131) #24	SYNE1 (ENSPSNG00000022337) #25	ENSPSNG00000022502	ESR1 (ENSPSNG00000022511) #26	ENSPSNG00000022515	ARMT1 (ENSPSNG00000022528) #28	RMND1 (ENSPSNG00000022531) #29	ZBTB2 (ENSPSNG00000022533) #30	AKAP12 (ENSPSNG00000022535)	MTHFD1L (ENSPSNG00000022543) #31	PLEKHG1 (ENSPSNG00000022563) #32	IYD (ENSPSNG00000022571) #33	PPP1R14C (ENSPSNG00000022573) #34	ENSPSNG00000009584
Dolphin	MODERN SPECIES	3444														RGS17 (ENSTTRG00000000403) #20	MTRF1L (ENSTTRG00000000402) #21	FBXO5 (ENSTTRG00000000401) #22
Sperm whale	MODERN SPECIES	1	ENSPCTG00005003781	ENSPCTG00005003788	SNX9 (ENSPCTG00005003806)	ZDHHC14 (ENSPCTG00005003841) #9	TMEM242 (ENSPCTG00005003855) #10	ARID1B (ENSPCTG00005003954) #11	NOX3 (ENSPCTG00005004723) #12	TFB1M (ENSPCTG00005004760) #13	CLDN20 (ENSPCTG00005004774)	SCAF8 (ENSPCTG00005004842) #15	CNKSR3 (ENSPCTG00005005282) #17	IPCEF1 (ENSPCTG00005005351) #18	OPRM1 (ENSPCTG00005005408) #19	RGS17 (ENSPCTG00005005451) #20	MTRF1L (ENSPCTG00005005476) #21	FBXO5 (ENSPCTG00005005511) #22	VIP (ENSPCTG00005005536) #23	MYCT1 (ENSPCTG00005005562) #24	ENSPCTG00005005623 #25	ENSPCTG00005005713 #25	SYNE1 (ENSPCTG00005005794) #25	ESR1 (ENSPCTG00005005962) #26	ENSPCTG00005006030	CCDC170 (ENSPCTG00005006069) #27	ARMT1 (ENSPCTG00005006118) #28	RMND1 (ENSPCTG00005006136) #29	ZBTB2 (ENSPCTG00005006183) #30	AKAP12 (ENSPCTG00005006212)	MTHFD1L (ENSPCTG00005006289) #31	PLEKHG1 (ENSPCTG00005006762) #32	IYD (ENSPCTG00005006834) #33
Blue whale	MODERN SPECIES	3	SNX9 (ENSBMSG00010011766)	ZDHHC14 (ENSBMSG00010011784) #9	TMEM242 (ENSBMSG00010011795) #10	ARID1B (ENSBMSG00010011869) #11	NOX3 (ENSBMSG00010008478) #12	TFB1M (ENSBMSG00010008513) #13	CLDN20 (ENSBMSG00010008525)	TIAM2 (ENSBMSG00010008560) #14	SCAF8 (ENSBMSG00010008649) #15	ENSBMSG00010008722	CNKSR3 (ENSBMSG00010008753) #17	IPCEF1 (ENSBMSG00010008800) #18	OPRM1 (ENSBMSG00010008836) #19	RGS17 (ENSBMSG00010008878) #20	MTRF1L (ENSBMSG00010008898) #21	FBXO5 (ENSBMSG00010008916) #22	VIP (ENSBMSG00010008935) #23	MYCT1 (ENSBMSG00010008945) #24	ENSBMSG00010009099 #25	ENSBMSG00010009535	ENSBMSG00010009558 #25	ENSBMSG00010009590 #25	ESR1 (ENSBMSG00010009630) #26	CCDC170 (ENSBMSG00010009670) #27	ARMT1 (ENSBMSG00010009705) #28	RMND1 (ENSBMSG00010009721) #29	ZBTB2 (ENSBMSG00010009731) #30	AKAP12 (ENSBMSG00010009739)	MTHFD1L (ENSBMSG00010009772) #31	PLEKHG1 (ENSBMSG00010009838) #32	IYD (ENSBMSG00010009876) #33
Pecora	ANCESTRAL SPECIES	19	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT01010000224193	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT01010000224193	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Bovinae	ANCESTRAL SPECIES	35	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33
Bos	ANCESTRAL SPECIES	19	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a
Bos_a	ANCESTRAL SPECIES	54	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000153147.m.a.a.a.a.b	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b.f.a	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Domestic yak	MODERN SPECIES	1	NOX3 (ENSBGRG00000026724) #12	TFB1M (ENSBGRG00000026726) #13	ENSBGRG00000003593	ENSBGRG00000003596	ENSBGRG00000003606	TIAM2 (ENSBGRG00000003631) #14	ENSBGRG00000003694	SCAF8 (ENSBGRG00000003747) #15	ENSBGRG00000003933	CNKSR3 (ENSBGRG00000003987) #17	IPCEF1 (ENSBGRG00000004304) #18	OPRM1 (ENSBGRG00000004371) #19	ENSBGRG00000004442	RGS17 (ENSBGRG00000004454) #20	MTRF1L (ENSBGRG00000004480) #21	FBXO5 (ENSBGRG00000004593) #22	VIP (ENSBGRG00000004685) #23	MYCT1 (ENSBGRG00000004741) #24	ENSBGRG00000004829 #25	ENSBGRG00000005643	ENSBGRG00000005659	ENSBGRG00000005717 #25	ENSBGRG00000005788 #25	ESR1 (ENSBGRG00000006011) #26	CCDC170 (ENSBGRG00000006106) #27	ARMT1 (ENSBGRG00000006221) #28	RMND1 (ENSBGRG00000006257) #29	ZBTB2 (ENSBGRG00000006306) #30	AKAP12 (ENSBGRG00000006364)	MTHFD1L (ENSBGRG00000006438) #31	PLEKHG1 (ENSBGRG00000006883) #32
Wild yak	MODERN SPECIES	414			NOX3 (ENSBMUG00000023948) #12	CLDN20 (ENSBMUG00000023939)	TFB1M (ENSBMUG00000023932) #13	TIAM2 (ENSBMUG00000023891) #14	ENSBMUG00000023830	SCAF8 (ENSBMUG00000023827) #15	ENSBMUG00000023809	CNKSR3 (ENSBMUG00000023803) #17	IPCEF1 (ENSBMUG00000023775) #18	OPRM1 (ENSBMUG00000023738) #19	ENSBMUG00000023702	RGS17 (ENSBMUG00000023688) #20	MTRF1L (ENSBMUG00000023676) #21	FBXO5 (ENSBMUG00000023656) #22	VIP (ENSBMUG00000023648) #23	MYCT1 (ENSBMUG00000023638) #24	SYNE1 (ENSBMUG00000023407) #25	ENSBMUG00000022966 #26	CCDC170 (ENSBMUG00000022950) #27	ARMT1 (ENSBMUG00000022940) #28	RMND1 (ENSBMUG00000022921) #29	ZBTB2 (ENSBMUG00000022889) #30	AKAP12 (ENSBMUG00000022883)	MTHFD1L (ENSBMUG00000022849) #31	PLEKHG1 (ENSBMUG00000022740) #32	ENSBMUG00000022703
Bos_b	ANCESTRAL SPECIES	42	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00740000117156.b.e.a	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a #25	ENSGT00940000165162	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.e.a
Cow	MODERN SPECIES	28	ENSBTAG00000045772	ARID1B (ENSBTAG00000002728) #11	NOX3 (ENSBTAG00000013551) #12	CLDN20 (ENSBTAG00000046726)	TFB1M (ENSBTAG00000031895) #13	TIAM2 (ENSBTAG00000010047) #14	ENSBTAG00000048691	SCAF8 (ENSBTAG00000031917) #15	ENSBTAG00000049872	ENSBTAG00000020723	CNKSR3 (ENSBTAG00000012674) #17	IPCEF1 (ENSBTAG00000003489) #18	OPRM1 (ENSBTAG00000019719) #19	RGS17 (ENSBTAG00000009277) #20	MTRF1L (ENSBTAG00000009275) #21	FBXO5 (ENSBTAG00000021193) #22	VIP (ENSBTAG00000013400) #23	MYCT1 (ENSBTAG00000043975) #24	ENSBTAG00000054597 #25	ENSBTAG00000052173 #25	ENSBTAG00000054309	ENSBTAG00000052949 #25	SYNE1 (ENSBTAG00000009362) #25	ESR1 (ENSBTAG00000007159) #26	CCDC170 (ENSBTAG00000004099) #27	ENSBTAG00000006398	ARMT1 (ENSBTAG00000004098) #28	RMND1 (ENSBTAG00000013224) #29	ZBTB2 (ENSBTAG00000014790) #30	AKAP12 (ENSBTAG00000014788)	MTHFD1L (ENSBTAG00000009846) #31
Hybrid Bos Indicus	MODERN SPECIES	28	TMEM242 (ENSBIXG00005017618) #10	ENSBIXG00005017632	ARID1B (ENSBIXG00005018627) #11	NOX3 (ENSBIXG00005018801) #12	CLDN20 (ENSBIXG00005018824)	TFB1M (ENSBIXG00005005435) #13	TIAM2 (ENSBIXG00005018908) #14	ENSBIXG00005000047	SCAF8 (ENSBIXG00005005736) #15	ENSBIXG00005019017	ENSBIXG00005019032	CNKSR3 (ENSBIXG00005019050) #17	IPCEF1 (ENSBIXG00005019118) #18	OPRM1 (ENSBIXG00005019182) #19	MTRF1L (ENSBIXG00005005667) #21	FBXO5 (ENSBIXG00005019333) #22	VIP (ENSBIXG00005019364) #23	MYCT1 (ENSBIXG00005019369) #24	SYNE1 (ENSBIXG00005007834) #25	ESR1 (ENSBIXG00005020485) #26	ENSBIXG00005020541	CCDC170 (ENSBIXG00005003477) #27	ARMT1 (ENSBIXG00005020618) #28	RMND1 (ENSBIXG00005020664) #29	ZBTB2 (ENSBIXG00005020697) #30	AKAP12 (ENSBIXG00005020718)	MTHFD1L (ENSBIXG00005020926) #31	PLEKHG1 (ENSBIXG00005021022) #32	ENSBIXG00005003560	IYD (ENSBIXG00005021090) #33	PPP1R14C (ENSBIXG00005021119) #34
American bison	MODERN SPECIES	3071	ENSBBBG00000002188	ARID1B (ENSBBBG00000011875) #11	ENSBBBG00000011886	NOX3 (ENSBBBG00000011894) #12	CLDN20 (ENSBBBG00000011901)	TFB1M (ENSBBBG00000011905) #13	TIAM2 (ENSBBBG00000002224) #14	ENSBBBG00000001962	SCAF8 (ENSBBBG00000002232) #15	ENSBBBG00000011959	CNKSR3 (ENSBBBG00000011968) #17	IPCEF1 (ENSBBBG00000011980) #18	OPRM1 (ENSBBBG00000012004) #19	RGS17 (ENSBBBG00000002257) #20	MTRF1L (ENSBBBG00000012041) #21	FBXO5 (ENSBBBG00000012046) #22	VIP (ENSBBBG00000012054) #23	MYCT1 (ENSBBBG00000012062) #24	SYNE1 (ENSBBBG00000012707) #25	ENSBBBG00000008109 #26	CCDC170 (ENSBBBG00000012772) #27	ARMT1 (ENSBBBG00000012777) #28	RMND1 (ENSBBBG00000012797) #29	ZBTB2 (ENSBBBG00000012799) #30	AKAP12 (ENSBBBG00000008737)	MTHFD1L (ENSBBBG00000002508) #31	PLEKHG1 (ENSBBBG00000001747) #32	IYD (ENSBBBG00000012867) #33	ENSBBBG00000012881	ENSBBBG00000012884	ENSBBBG00000012889
Caprinae	ANCESTRAL SPECIES		ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT01010000224193	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00940000161394.m.a	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.d
Goat	MODERN SPECIES	28	NOX3 (ENSCHIG00000014008) #12	CLDN20 (ENSCHIG00000004190)	TFB1M (ENSCHIG00000017013) #13	TIAM2 (ENSCHIG00000016626) #14	ENSCHIG00000026922	SCAF8 (ENSCHIG00000025041) #15	ENSCHIG00000009557	ENSCHIG00000024852	CNKSR3 (ENSCHIG00000003272) #17	IPCEF1 (ENSCHIG00000004099) #18	OPRM1 (ENSCHIG00000017379) #19	ENSCHIG00000012665	ENSCHIG00000006774	RGS17 (ENSCHIG00000018427) #20	MTRF1L (ENSCHIG00000007830) #21	FBXO5 (ENSCHIG00000026682) #22	ENSCHIG00000018470	VIP (ENSCHIG00000015334) #23	MYCT1 (ENSCHIG00000027092) #24	SYNE1 (ENSCHIG00000016453) #25	ENSCHIG00000017428	ENSCHIG00000022719	ESR1 (ENSCHIG00000014058) #26	CCDC170 (ENSCHIG00000015746) #27	ARMT1 (ENSCHIG00000024403) #28	RMND1 (ENSCHIG00000013571) #29	ZBTB2 (ENSCHIG00000023404) #30	AKAP12 (ENSCHIG00000013493)	MTHFD1L (ENSCHIG00000026337) #31	PLEKHG1 (ENSCHIG00000011933) #32	IYD (ENSCHIG00000026899) #33
Rambouillet Sheep	MODERN SPECIES	24	NOX3 (ENSOARG00020003085) #12	CLDN20 (ENSOARG00020025258)	TFB1M (ENSOARG00020025200) #13	TIAM2 (ENSOARG00020025148) #14	ENSOARG00020025142	SCAF8 (ENSOARG00020025109) #15	ENSOARG00020025094	ENSOARG00020025060	ENSOARG00020025048	CNKSR3 (ENSOARG00020025010) #17	IPCEF1 (ENSOARG00020024992) #18	OPRM1 (ENSOARG00020024943) #19	ENSOARG00020024931	RGS17 (ENSOARG00020024922) #20	MTRF1L (ENSOARG00020024904) #21	FBXO5 (ENSOARG00020024869) #22	VIP (ENSOARG00020024851) #23	MYCT1 (ENSOARG00020024842) #24	SYNE1 (ENSOARG00020022335) #25	ESR1 (ENSOARG00020022045) #26	CCDC170 (ENSOARG00020021972) #27	ARMT1 (ENSOARG00020021948) #28	RMND1 (ENSOARG00020021897) #29	ZBTB2 (ENSOARG00020021872) #30	AKAP12 (ENSOARG00020021809)	MTHFD1L (ENSOARG00020021229) #31	PLEKHG1 (ENSOARG00020021072) #32	IYD (ENSOARG00020021015) #33	PPP1R14C (ENSOARG00020020977) #34	ENSOARG00020020931	ENSOARG00020020885
Siberian musk deer	MODERN SPECIES	60										SCAF8 (ENSMMSG00000000189) #15	CNKSR3 (ENSMMSG00000000117) #17	IPCEF1 (ENSMMSG00000005110) #18	OPRM1 (ENSMMSG00000004891) #19	RGS17 (ENSMMSG00000004836) #20	MTRF1L (ENSMMSG00000004788) #21	FBXO5 (ENSMMSG00000004752) #22	VIP (ENSMMSG00000004730) #23	MYCT1 (ENSMMSG00000004698) #24	SYNE1 (ENSMMSG00000004396) #25	ESR1 (ENSMMSG00000004298) #26	ENSMMSG00000004280	CCDC170 (ENSMMSG00000004253) #27	ARMT1 (ENSMMSG00000004226) #28	RMND1 (ENSMMSG00000004210) #29	ZBTB2 (ENSMMSG00000004198) #30	AKAP12 (ENSMMSG00000004153)	MTHFD1L (ENSMMSG00000004101) #31	ENSMMSG00000004073	PLEKHG1 (ENSMMSG00000004000) #32	IYD (ENSMMSG00000003954) #33	PPP1R14C (ENSMMSG00000003908) #34
Yarkand deer	MODERN SPECIES	18	ARID1B (ENSCHYG00000014258) #11	ENSCHYG00000014034	ENSCHYG00000013993	NOX3 (ENSCHYG00000026919) #12	CLDN20 (ENSCHYG00000026915)	TFB1M (ENSCHYG00000026906) #13	TIAM2 (ENSCHYG00000026882) #14	ENSCHYG00000026877	SCAF8 (ENSCHYG00000026866) #15	CNKSR3 (ENSCHYG00000026849) #17	IPCEF1 (ENSCHYG00000026833) #18	OPRM1 (ENSCHYG00000026823) #19	ENSCHYG00000026812	RGS17 (ENSCHYG00000026801) #20	ENSCHYG00000026781 #21	FBXO5 (ENSCHYG00000026768) #22	VIP (ENSCHYG00000026757) #23	MYCT1 (ENSCHYG00000026747) #24	SYNE1 (ENSCHYG00000025778) #25	ESR1 (ENSCHYG00000025561) #26	CCDC170 (ENSCHYG00000025505) #27	ARMT1 (ENSCHYG00000025462) #28	RMND1 (ENSCHYG00000025421) #29	ZBTB2 (ENSCHYG00000025392) #30	AKAP12 (ENSCHYG00000025364)	MTHFD1L (ENSCHYG00000024773) #31	ENSCHYG00000024716	PLEKHG1 (ENSCHYG00000024587) #32	IYD (ENSCHYG00000024472) #33	PPP1R14C (ENSCHYG00000024443) #34	ENSCHYG00000024426
Camelidae	ANCESTRAL SPECIES	37	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Arabian camel	MODERN SPECIES	34	SYNJ2 (ENSCDRG00005016839)	SNX9 (ENSCDRG00005017884)	ZDHHC14 (ENSCDRG00005018018) #9	TMEM242 (ENSCDRG00005018146) #10	ARID1B (ENSCDRG00005018236) #11	NOX3 (ENSCDRG00005018725) #12	TFB1M (ENSCDRG00005018794) #13	CLDN20 (ENSCDRG00005018827)	TIAM2 (ENSCDRG00005018842) #14	SCAF8 (ENSCDRG00005018900) #15	CNKSR3 (ENSCDRG00005019125) #17	IPCEF1 (ENSCDRG00005019172) #18	OPRM1 (ENSCDRG00005019256) #19	RGS17 (ENSCDRG00005019286) #20	MTRF1L (ENSCDRG00005019302) #21	FBXO5 (ENSCDRG00005019337) #22	VIP (ENSCDRG00005019356) #23	MYCT1 (ENSCDRG00005019378) #24	SYNE1 (ENSCDRG00005019486) #25	ENSCDRG00005020770 #26	ENSCDRG00005020779 #26	CCDC170 (ENSCDRG00005020784) #27	ARMT1 (ENSCDRG00005020788) #28	RMND1 (ENSCDRG00005020798) #29	ZBTB2 (ENSCDRG00005020809) #30	AKAP12 (ENSCDRG00005020815)	MTHFD1L (ENSCDRG00005020831) #31	PLEKHG1 (ENSCDRG00005020866) #32	IYD (ENSCDRG00005020897) #33	PPP1R14C (ENSCDRG00005020905) #34	ENSCDRG00005020920
Alpaca	MODERN SPECIES	3127												IPCEF1 (ENSVPAG00000001194) #18	OPRM1 (ENSVPAG00000001193) #19	RGS17 (ENSVPAG00000001192) #20	MTRF1L (ENSVPAG00000001191) #21	FBXO5 (ENSVPAG00000001190) #22	VIP (ENSVPAG00000001189) #23	MYCT1 (ENSVPAG00000001188) #24	SYNE1 (ENSVPAG00000001186) #25	ESR1 (ENSVPAG00000001185) #26
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Ursidae	ANCESTRAL SPECIES	22	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642.e #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00940000161275 #36
Ursus	ANCESTRAL SPECIES	81	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642.e #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Polar bear	MODERN SPECIES	150	TMEM242 (ENSUMAG00000012861) #10	LDHAL6B (ENSUMAG00000012868)	ARID1B (ENSUMAG00000012934) #11	NOX3 (ENSUMAG00000013373) #12	TFB1M (ENSUMAG00000013377) #13	ENSUMAG00000013378	CLDN20 (ENSUMAG00000013386)	ENSUMAG00000013389 #14	SCAF8 (ENSUMAG00000013404) #15	ENSUMAG00000013414	CNKSR3 (ENSUMAG00000013420) #17	IPCEF1 (ENSUMAG00000013444) #18	OPRM1 (ENSUMAG00000013465) #19	RGS17 (ENSUMAG00000013506) #20	MTRF1L (ENSUMAG00000013507) #21	FBXO5 (ENSUMAG00000013509) #22
American black bear	MODERN SPECIES	6484														RGS17 (ENSUAMG00000008218) #20	MTRF1L (ENSUAMG00000008221) #21	FBXO5 (ENSUAMG00000008224) #22
Giant Panda	MODERN SPECIES	1	SNX9 (ENSAMEG00000009626)	ZDHHC14 (ENSAMEG00000009680) #9	ENSAMEG00000009699 #10	ARID1B (ENSAMEG00000009707) #11	ENSAMEG00000024497 #12	ENSAMEG00000012782 #12	CLDN20 (ENSAMEG00000019340)	TFB1M (ENSAMEG00000012761) #13	TIAM2 (ENSAMEG00000012741) #14	SCAF8 (ENSAMEG00000007583) #15	CNKSR3 (ENSAMEG00000007564) #17	IPCEF1 (ENSAMEG00000010361) #18	OPRM1 (ENSAMEG00000010364) #19	RGS17 (ENSAMEG00000001249) #20	MTRF1L (ENSAMEG00000001252) #21	FBXO5 (ENSAMEG00000030250) #22	VIP (ENSAMEG00000010871) #23	MYCT1 (ENSAMEG00000025534) #24	SYNE1 (ENSAMEG00000010887) #25	ESR1 (ENSAMEG00000011072) #26	CCDC170 (ENSAMEG00000011074) #27	ARMT1 (ENSAMEG00000024514) #28	RMND1 (ENSAMEG00000011087) #29	ZBTB2 (ENSAMEG00000023899) #30	AKAP12 (ENSAMEG00000011101)	MTHFD1L (ENSAMEG00000003323) #31	ENSAMEG00000027298	PLEKHG1 (ENSAMEG00000003289) #32	ENSAMEG00000003274 #33	ENSAMEG00000027911 #34	ENSAMEG00000018260
Mustelinae	ANCESTRAL SPECIES	26	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.b	ENSGT01030000235909
American mink	MODERN SPECIES	4	SNX9 (ENSNVIG00000009085)	ZDHHC14 (ENSNVIG00000009059) #9	TM242 (ENSNVIG00000009036) #10	ARID1B (ENSNVIG00000008689) #11	ENSNVIG00000008662	NOX3 (ENSNVIG00000008632) #12	CLD20 (ENSNVIG00000008611)	TFB1M (ENSNVIG00000008600) #13	ENSNVIG00000008569 #14	SCAF8 (ENSNVIG00000008452) #15	CNKSR3 (ENSNVIG00000008386) #17	IPCEF1 (ENSNVIG00000008312) #18	OPRM1 (ENSNVIG00000008214) #19	RGS17 (ENSNVIG00000008185) #20	MTRF1L (ENSNVIG00000008138) #21	FBXO5 (ENSNVIG00000008114) #22	VIP (ENSNVIG00000008088) #23	MYCT1 (ENSNVIG00000008075) #24	SYNE1 (ENSNVIG00000007105) #25	ESR1 (ENSNVIG00000006962) #26	CCDC170 (ENSNVIG00000006940) #27	ARMT1 (ENSNVIG00000006911) #28	RMND1 (ENSNVIG00000006864) #29	ZBTB2 (ENSNVIG00000006849) #30	AKAP12 (ENSNVIG00000006843)	MTHFD1L (ENSNVIG00000006768) #31	PLEKHG1 (ENSNVIG00000006728) #32	ENSNVIG00000006714	IYD1 (ENSNVIG00000006683) #33	PPP1R14C (ENSNVIG00000006672) #34	ENSNVIG00000006654
Ferret	MODERN SPECIES	201														RGS17 (ENSMPUG00000010584) #20	MTRF1L (ENSMPUG00000010577) #21	FBXO5 (ENSMPUG00000010553) #22	VIP (ENSMPUG00000010545) #23	MYCT1 (ENSMPUG00000010542) #24	SYNE1 (ENSMPUG00000010485) #25	ESR1 (ENSMPUG00000010481) #26	CCDC170 (ENSMPUG00000010462) #27	ARMT1 (ENSMPUG00000010459) #28	RMND1 (ENSMPUG00000010450) #29	ZBTB2 (ENSMPUG00000010444) #30	AKAP12 (ENSMPUG00000010439)	ENSMPUG00000010433	ENSMPUG00000010428	MTHFD1L (ENSMPUG00000010414) #31	ENSMPUG00000010410	PLEKHG1 (ENSMPUG00000010404) #32	IYD (ENSMPUG00000010397) #33
Canidae	ANCESTRAL SPECIES	34	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Dingo	MODERN SPECIES	125	NOX3 (ENSCAFG00020015230) #12	CLDN20 (ENSCAFG00020015226)	TFB1M (ENSCAFG00020015224) #13	TIAM2 (ENSCAFG00020015145) #14	SCAF8 (ENSCAFG00020015048) #15	ENSCAFG00020015039	ENSCAFG00020015021	CNKSR3 (ENSCAFG00020015015) #17	IPCEF1 (ENSCAFG00020014995) #18	OPRM1 (ENSCAFG00020014975) #19	ENSCAFG00020014964	ENSCAFG00020014963	ENSCAFG00020014955	RGS17 (ENSCAFG00020014939) #20	MTRF1L (ENSCAFG00020014937) #21	FBXO5 (ENSCAFG00020014935) #22	VIP (ENSCAFG00020014925) #23	MYCT1 (ENSCAFG00020014923) #24	ENSCAFG00020014881 #25	ENSCAFG00020014804 #25	ESR1 (ENSCAFG00020014707) #26	CCDC170 (ENSCAFG00020014704) #27	ENSCAFG00020014702 #28	ENSCAFG00020014700 #28	RMND1 (ENSCAFG00020014697) #29	ZBTB2 (ENSCAFG00020014696) #30	AKAP12 (ENSCAFG00020014695)	ENSCAFG00020014694	ENSCAFG00020014133 #31	ENSCAFG00020014068 #31	PLEKHG1 (ENSCAFG00020014055) #32
Dog	MODERN SPECIES		ENSCAFG00845000840	ZDHHC14 (ENSCAFG00845000812) #9	ENSCAFG00845000800	TMEM242 (ENSCAFG00845000782) #10	ARID1B (ENSCAFG00845000636) #11	NOX3 (ENSCAFG00845000506) #12	CLDN20 (ENSCAFG00845000485)	TFB1M (ENSCAFG00845000478) #13	TIAM2 (ENSCAFG00845000411) #14	SCAF8 (ENSCAFG00845000294) #15	ENSCAFG00845000268	CNKSR3 (ENSCAFG00845000205) #17	OPRM1 (ENSCAFG00845000160) #19	RGS17 (ENSCAFG00845000141) #20	MTRF1L (ENSCAFG00845000120) #21	FBXO5 (ENSCAFG00845000104) #22	ENSCAFG00845000096	VIP (ENSCAFG00845000085) #23	MYCT1 (ENSCAFG00845000077) #24	ENSCAFG00845000071	SYNE1 (ENSCAFG00845000043) #25	ESR1 (ENSCAFG00845000028) #26	CCDC170 (ENSCAFG00845000020) #27	ARMT1 (ENSCAFG00845000014) #28	RMND1 (ENSCAFG00845000007) #29	ZBTB2 (ENSCAFG00845021289) #30	AKAP12 (ENSCAFG00845021174)	MTHFD1L (ENSCAFG00845020116) #31	PLEKHG1 (ENSCAFG00845019814) #32	IYD (ENSCAFG00845019736) #33	PPP1R14C (ENSCAFG00845019656) #34
Red fox	MODERN SPECIES	26											SCAF8 (ENSVVUG00000007532) #15	CNKSR3 (ENSVVUG00000007515) #17	IPCEF1 (ENSVVUG00000007491) #18	OPRM1 (ENSVVUG00000007466) #19	RGS17 (ENSVVUG00000007424) #20	FBXO5 (ENSVVUG00000007414) #22	ENSVVUG00000007408	VIP (ENSVVUG00000007395) #23	MYCT1 (ENSVVUG00000007392) #24	ENSVVUG00000006984 #25	ENSVVUG00000006396 #25	ESR1 (ENSVVUG00000006190) #26	CCDC170 (ENSVVUG00000006168) #27	ARMT1 (ENSVVUG00000006134) #28	RMND1 (ENSVVUG00000006114) #29	ZBTB2 (ENSVVUG00000006110) #30	ENSVVUG00000006108	AKAP12 (ENSVVUG00000006099)	ENSVVUG00000005367 #31	ENSVVUG00000005287 #31	PLEKHG1 (ENSVVUG00000005233) #32
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01040000242984	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00390000005732.j	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012.i #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01040000242984	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00390000005732.j	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012.i #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT01040000242984	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c
leopard	MODERN SPECIES	140														RGS17 (ENSPPRG00000011102) #20	MTRF1L (ENSPPRG00000011039) #21	FBXO5 (ENSPPRG00000011003) #22	VIP (ENSPPRG00000010990) #23	MYCT1 (ENSPPRG00000010948) #24	ENSPPRG00000010874 #25	ENSPPRG00000009951 #25	ESR1 (ENSPPRG00000009745) #26	CCDC170 (ENSPPRG00000009606) #27	ARMT1 (ENSPPRG00000009551) #28	RMND1 (ENSPPRG00000009267) #29	ZBTB2 (ENSPPRG00000009222) #30	AKAP12 (ENSPPRG00000009132)	MTHFD1L (ENSPPRG00000009075) #31	PLEKHG1 (ENSPPRG00000008781) #32	IYD (ENSPPRG00000008491) #33	PPP1R14C (ENSPPRG00000008482) #34	ENSPPRG00000008471
Tiger	MODERN SPECIES	551	SNX9 (ENSPTIG00000016966)	ZDHHC14 (ENSPTIG00000014488) #9	TMEM242 (ENSPTIG00000013511) #10	ARID1B (ENSPTIG00000009353) #11	ENSPTIG00000007298	NOX3 (ENSPTIG00000006575) #12	CLDN20 (ENSPTIG00000007262)	TFB1M (ENSPTIG00000003540) #13	ENSPTIG00000018691 #14	SCAF8 (ENSPTIG00000014836) #15	CNKSR3 (ENSPTIG00000012267) #17	IPCEF1 (ENSPTIG00000009006) #18	OPRM1 (ENSPTIG00000006702) #19	RGS17 (ENSPTIG00000004990) #20	MTRF1L (ENSPTIG00000020019) #21	FBXO5 (ENSPTIG00000019781) #22	VIP (ENSPTIG00000019361) #23	MYCT1 (ENSPTIG00000019093) #24	ENSPTIG00000003459 #25	ENSPTIG00000017428 #25	ENSPTIG00000017043	ENSPTIG00000006582 #26	CCDC170 (ENSPTIG00000015972) #27	ARMT1 (ENSPTIG00000015245) #28	RMND1 (ENSPTIG00000012455) #29	ZBTB2 (ENSPTIG00000012254) #30	AKAP12 (ENSPTIG00000011299)	MTHFD1L (ENSPTIG00000008995) #31
Cat	MODERN SPECIES	236	SNX9 (ENSFCAG00000010853)	ZDHHC14 (ENSFCAG00000006280) #9	TMEM242 (ENSFCAG00000036867) #10	ARID1B (ENSFCAG00000006278) #11	NOX3 (ENSFCAG00000006165) #12	CLDN20 (ENSFCAG00000001805)	TFB1M (ENSFCAG00000038785) #13	TIAM2 (ENSFCAG00000006164) #14	SCAF8 (ENSFCAG00000023424) #15	ENSFCAG00000051585	CNKSR3 (ENSFCAG00000005430) #17	IPCEF1 (ENSFCAG00000024018) #18	OPRM1 (ENSFCAG00000005359) #19	RGS17 (ENSFCAG00000037833) #20	MTRF1L (ENSFCAG00000037854) #21	FBXO5 (ENSFCAG00000030126) #22	VIP (ENSFCAG00000002179) #23	MYCT1 (ENSFCAG00000028294) #24	SYNE1 (ENSFCAG00000000049) #25	ESR1 (ENSFCAG00000031492) #26	CCDC170 (ENSFCAG00000010207) #27	ARMT1 (ENSFCAG00000010206) #28	RMND1 (ENSFCAG00000010205) #29	ZBTB2 (ENSFCAG00000040972) #30	AKAP12 (ENSFCAG00000041794)	MTHFD1L (ENSFCAG00000003673) #31	PLEKHG1 (ENSFCAG00000029811) #32	ENSFCAG00000052538	IYD (ENSFCAG00000003732) #33	ENSFCAG00000023771	PPP1R14C (ENSFCAG00000035894) #34
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Greater horseshoe bat	MODERN SPECIES	21	ZDHHC14 (ENSRFEG00010019985) #9	ENSRFEG00010019950	ENSRFEG00010019919 #10	ARID1B (ENSRFEG00010019697) #11	NOX3 (ENSRFEG00010019587) #12	CLDN20 (ENSRFEG00010019574)	TFB1M (ENSRFEG00010019543) #13	TIAM2 (ENSRFEG00010019501) #14	SCAF8 (ENSRFEG00010018868) #15	CNKSR3 (ENSRFEG00010018738) #17	ENSRFEG00010018693	IPCEF1 (ENSRFEG00010018675) #18	OPRM1 (ENSRFEG00010018574) #19	RGS17 (ENSRFEG00010018529) #20	MTRF1L (ENSRFEG00010018467) #21	FBXO5 (ENSRFEG00010018406) #22	ENSRFEG00010018397	ENSRFEG00010018375	VIP (ENSRFEG00010018363) #23	MYCT1 (ENSRFEG00010018323) #24	SYNE1 (ENSRFEG00010017835) #25	ESR1 (ENSRFEG00010017671) #26	CCDC170 (ENSRFEG00010017486) #27	ARMT1 (ENSRFEG00010017409) #28	RMND1 (ENSRFEG00010017312) #29	ZBTB2 (ENSRFEG00010017257) #30	AKAP12 (ENSRFEG00010017239)	ENSRFEG00010017181	MTHFD1L (ENSRFEG00010016718) #31	PLEKHG1 (ENSRFEG00010016656) #32	ENSRFEG00010016588
Microbat	MODERN SPECIES	1062	SNX9 (ENSMLUG00000013344)	ENSMLUG00000022376	ENSMLUG00000024961	ZDHHC14 (ENSMLUG00000013339) #9	TMEM242 (ENSMLUG00000024744) #10	ARID1B (ENSMLUG00000011428) #11	NOX3 (ENSMLUG00000002990) #12	CLDN20 (ENSMLUG00000011344)	TFB1M (ENSMLUG00000011329) #13	TIAM2 (ENSMLUG00000011283) #14	SCAF8 (ENSMLUG00000029190) #15	CNKSR3 (ENSMLUG00000009567) #17	IPCEF1 (ENSMLUG00000010851) #18	OPRM1 (ENSMLUG00000010826) #19	RGS17 (ENSMLUG00000027630) #20	FBXO5 (ENSMLUG00000008413) #22	VIP (ENSMLUG00000014238) #23	MYCT1 (ENSMLUG00000014235) #24	ENSMLUG00000014185 #25
Megabat	MODERN SPECIES	8528																FBXO5 (ENSPVAG00000012511) #22
Equus	ANCESTRAL SPECIES	46	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000163242.b.b	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT01090000263352	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.bb.a.a
Donkey	MODERN SPECIES	20	ZDHHC14 (ENSEASG00005038210) #9	ENSEASG00005032861	TMEM242 (ENSEASG00005018892) #10	ARID1B (ENSEASG00005018891) #11	NOX3 (ENSEASG00005018889) #12	CLDN20 (ENSEASG00005018888)	TFB1M (ENSEASG00005018887) #13	ENSEASG00005031064	TIAM2 (ENSEASG00005018884) #14	SCAF8 (ENSEASG00005018879) #15	CNKSR3 (ENSEASG00005018876) #17	IPCEF1 (ENSEASG00005018872) #18	OPRM1 (ENSEASG00005018870) #19	RGS17 (ENSEASG00005018868) #20	MTRF1L (ENSEASG00005018866) #21	FBXO5 (ENSEASG00005018864) #22	VIP (ENSEASG00005018861) #23	ENSEASG00005037232	MYCT1 (ENSEASG00005031624) #24	ENSEASG00005018835 #25	ENSEASG00005018807 #25	ESR1 (ENSEASG00005018755) #26	CCDC170 (ENSEASG00005018748) #27	ARMT1 (ENSEASG00005031339) #28	RMND1 (ENSEASG00005018744) #29	ZBTB2 (ENSEASG00005018742) #30	AKAP12 (ENSEASG00005018740)	MTHFD1L (ENSEASG00005017019) #31	ENSEASG00005016807 #32	ENSEASG00005016792 #33	ENSEASG00005023024
Horse	MODERN SPECIES	24	ZDHHC14 (ENSECAG00000018229) #9	TMEM242 (ENSECAG00000016335) #10	ENSECAG00000056473	ARID1B (ENSECAG00000000518) #11	NOX3 (ENSECAG00000020844) #12	TFB1M (ENSECAG00000020997) #13	CLDN20 (ENSECAG00000005339)	TIAM2 (ENSECAG00000023722) #14	ENSECAG00000044412	SCAF8 (ENSECAG00000005540) #15	CNKSR3 (ENSECAG00000019241) #17	IPCEF1 (ENSECAG00000003511) #18	OPRM1 (ENSECAG00000013458) #19	RGS17 (ENSECAG00000022231) #20	MTRF1L (ENSECAG00000002759) #21	FBXO5 (ENSECAG00000011630) #22	VIP (ENSECAG00000013586) #23	ENSECAG00000059138	MYCT1 (ENSECAG00000015960) #24	ENSECAG00000057509 #25	SYNE1 (ENSECAG00000017353) #25	ESR1 (ENSECAG00000022441) #26	CCDC170 (ENSECAG00000013130) #27	ARMT1 (ENSECAG00000015349) #28	RMND1 (ENSECAG00000018207) #29	ZBTB2 (ENSECAG00000021762) #30	AKAP12 (ENSECAG00000022166)	MTHFD1L (ENSECAG00000001166) #31	PLEKHG1 (ENSECAG00000007095) #32	IYD (ENSECAG00000018766) #33	ENSECAG00000034476 #34
Atlantogenata	ANCESTRAL SPECIES	51					ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d	ENSGT00940000161275 #36
Xenarthra	ANCESTRAL SPECIES	1316														ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Sloth	MODERN SPECIES	1155														RGS17 (ENSCHOG00000006892) #20	MTRF1L (ENSCHOG00000006884) #21	FBXO5 (ENSCHOG00000006877) #22
Armadillo	MODERN SPECIES	4516													ENSDNOG00000034948	RGS17 (ENSDNOG00000035766) #20	ENSDNOG00000049717 #21	FBXO5 (ENSDNOG00000001231) #22
Afrotheria	ANCESTRAL SPECIES	55						ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.a.a ##28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d	ENSGT00940000161275 #36
Afrotheria_a	ANCESTRAL SPECIES	51						ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.a.a ##28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT01100000263517.b.d.m.a.a.a.a.d	ENSGT00940000161275 #36
Elephant	MODERN SPECIES	1					ARID1B (ENSLAFG00000012011) #11	NOX3 (ENSLAFG00000013520) #12	TFB1M (ENSLAFG00000014035) #13	TIAM2 (ENSLAFG00000014023) #14	SCAF8 (ENSLAFG00000000022) #15	CNKSR3 (ENSLAFG00000006519) #17	IPCEF1 (ENSLAFG00000002600) #18	ENSLAFG00000031150	OPRM1 (ENSLAFG00000002597) #19	RGS17 (ENSLAFG00000004025) #20	MTRF1L (ENSLAFG00000004022) #21	FBXO5 (ENSLAFG00000001713) #22	VIP (ENSLAFG00000006337) #23	MYCT1 (ENSLAFG00000017921) #24	SYNE1 (ENSLAFG00000008554) #25	ENSLAFG00000015250 #26	CCDC170 (ENSLAFG00000012458) #27	ARMT1 (ENSLAFG00000007338) ##28	RMND1 (ENSLAFG00000017983) #29	ZBTB2 (ENSLAFG00000001805) #30	AKAP12 (ENSLAFG00000006275)	MTHFD1L (ENSLAFG00000001635) #31	PLEKHG1 (ENSLAFG00000002415) #32	IYD (ENSLAFG00000004806) #33	PPP1R14C (ENSLAFG00000015503) #34	ENSLAFG00000023055	LRP11 (ENSLAFG00000022229) #36
Tenrec	MODERN SPECIES	16765																FBXO5 (ENSETEG00000005657) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Opossum	MODERN SPECIES	1	ARID1B (ENSMODG00000008068) #11	ENSMODG00000046689	NOX3 (ENSMODG00000008142) #12	CLDN20 (ENSMODG00000023278)	TFB1M (ENSMODG00000042364) #13	ENSMODG00000011574	TIAM2 (ENSMODG00000008254) #14	ENSMODG00000040441	SCAF8 (ENSMODG00000008301) #15	CNKSR3 (ENSMODG00000008343) #17	ENSMODG00000008368	OPRM1 (ENSMODG00000008382) #19	ENSMODG00000042566	RGS17 (ENSMODG00000008463) #20	MTRF1L (ENSMODG00000008487) #21	FBXO5 (ENSMODG00000008501) #22	VIP (ENSMODG00000008511) #23	MYCT1 (ENSMODG00000008518) #24	SYNE1 (ENSMODG00000016253) #25	ESR1 (ENSMODG00000016719) #26	CCDC170 (ENSMODG00000016728) #27	ARMT1 (ENSMODG00000028240) #28	RMND1 (ENSMODG00000016750) #29	ZBTB2 (ENSMODG00000040530) #30	ENSMODG00000046586	MTHFD1L (ENSMODG00000016765) #31	ENSMODG00000016771 #32	ENSMODG00000041763 #32	IYD (ENSMODG00000016781) #33	ENSMODG00000016787 #34	LRP11 (ENSMODG00000016792) #36
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.c #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Diprotodontia_a	ANCESTRAL SPECIES	43	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.c #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1190	ENSVURG00010017551	ENSVURG00010017546 #10	ENSVURG00010017505 #11	ENSVURG00010017476	ENSVURG00010017467 #12	ENSVURG00010017460	ENSVURG00010017454 #13	ENSVURG00010017399 #14	ENSVURG00010017329 #15	ENSVURG00010017300 #17	ENSVURG00010017288 #18	ENSVURG00010017278 #19	ENSVURG00010017270 #19	ENSVURG00010017239 #20	ENSVURG00010017229 #21	ENSVURG00010017222 #22	ENSVURG00010017215	ENSVURG00010017208	ENSVURG00010017199 #24
Common wonbat	MODERN SPECIES	1190	ENSVURG00010018765 #9	ENSVURG00010018758	ENSVURG00010018747 #10	ENSVURG00010018695 #11	ENSVURG00010018684	ENSVURG00010018676 #12	ENSVURG00010018671	ENSVURG00010018668 #13	ENSVURG00010018599 #14	ENSVURG00010018545 #15	ENSVURG00010018529 #17	ENSVURG00010018517 #18	ENSVURG00010018440 #19	ENSVURG00010018398 #20	ENSVURG00010018380 #21	ENSVURG00010018374 #22	ENSVURG00010018366	ENSVURG00010018363	ENSVURG00010018358 #24	ENSVURG00010018354	ENSVURG00010018341	ENSVURG00010018331	ENSVURG00010018324	ENSVURG00010018319	ENSVURG00010018316	ENSVURG00010018308	ENSVURG00010018305	ENSVURG00010018293	ENSVURG00010018264	ENSVURG00010018243	ENSVURG00010018231
koala	MODERN SPECIES	25	SNX9 (ENSPCIG00000010173)	ENSPCIG00000010170	ZDHHC14 (ENSPCIG00000010169) #9	TMEM242 (ENSPCIG00000010168) #10	ARID1B (ENSPCIG00000014269) #11	NOX3 (ENSPCIG00000000686) #12	CLDN20 (ENSPCIG00000001027)	TFB1M (ENSPCIG00000001010) #13	TIAM2 (ENSPCIG00000001091) #14	SCAF8 (ENSPCIG00000001141) #15	CNKSR3 (ENSPCIG00000001171) #17	IPCEF1 (ENSPCIG00000001189) #18	OPRM1 (ENSPCIG00000001232) #19	RGS17 (ENSPCIG00000024049) #20	MTRF1L (ENSPCIG00000008136) #21	FBXO5 (ENSPCIG00000027501) #22	ENSPCIG00000008468	ENSPCIG00000026717	MYCT1 (ENSPCIG00000026720) #24	ENSPCIG00000026821 #25	ENSPCIG00000037024	ENSPCIG00000035321 #25	ENSPCIG00000026913 #25	ENSPCIG00000015401 #26	CCDC170 (ENSPCIG00000015420) #27	ARMT1 (ENSPCIG00000015424) #28	RMND1 (ENSPCIG00000015430) #29	ZBTB2 (ENSPCIG00000000317) #30	ENSPCIG00000000275	MTHFD1L (ENSPCIG00000000340) #31	ENSPCIG00000036024 #32
Wallaby	MODERN SPECIES	2073															MTRF1L (ENSMEUG00000007378) #21	FBXO5 (ENSMEUG00000007369) #22
Tasmanian devil	MODERN SPECIES	3	ZDHHC14 (ENSSHAG00000018630) #9	ENSSHAG00000025144 #10	ARID1B (ENSSHAG00000017851) #11	ENSSHAG00000021568	ENSSHAG00000030648	NOX3 (ENSSHAG00000014151) #12	TFB1M (ENSSHAG00000013259) #13	CLDN20 (ENSSHAG00000022719)	TIAM2 (ENSSHAG00000012539) #14	SCAF8 (ENSSHAG00000009915) #15	CNKSR3 (ENSSHAG00000007010) #17	IPCEF1 (ENSSHAG00000025279) #18	OPRM1 (ENSSHAG00000005181) #19	RGS17 (ENSSHAG00000020953) #20	MTRF1L (ENSSHAG00000017997) #21	FBXO5 (ENSSHAG00000017971) #22	ENSSHAG00000031731	MYCT1 (ENSSHAG00000028412) #24	SYNE1 (ENSSHAG00000016595) #25	ESR1 (ENSSHAG00000015240) #26	CCDC170 (ENSSHAG00000013818) #27	ENSSHAG00000013619	ARMT1 (ENSSHAG00000026323) #28	ZBTB2 (ENSSHAG00000013043) #30	RMND1 (ENSSHAG00000020900) #29	ENSSHAG00000012930	MTHFD1L (ENSSHAG00000010362) #31	PLEKHG1 (ENSSHAG00000009584) #32	IYD (ENSSHAG00000005031) #33	PPP1R14C (ENSSHAG00000017832) #34	LRP11 (ENSSHAG00000027360) #36
Platypus	MODERN SPECIES	11	TMEM242 (ENSOANG00000039791) #10	NOX3 (ENSOANG00000022080) #12	ENSOANG00000045786	CLDN20 (ENSOANG00000048314)	TFB1M (ENSOANG00000048035) #13	TIAM2 (ENSOANG00000006708) #14	SCAF8 (ENSOANG00000014230) #15	CNKSR3 (ENSOANG00000014617) #17	ENSOANG00000014618	ENSOANG00000047481	ENSOANG00000041492	ENSOANG00000014619 #19	ENSOANG00000038578 #19	RGS17 (ENSOANG00000042607) #20	MTRF1L (ENSOANG00000037135) #21	FBXO5 (ENSOANG00000005309) #22	VIP (ENSOANG00000003593) #23	MYCT1 (ENSOANG00000042329) #24	ENSOANG00000046889	ENSOANG00000047227	ENSOANG00000041148	ENSOANG00000011163	QKI (ENSOANG00000011161)	SOD2 (ENSOANG00000000632)	WTAP (ENSOANG00000038325)	ACAT2 (ENSOANG00000048813)	ENSOANG00000038861	PNLDC1 (ENSOANG00000012199)	TCP1 (ENSOANG00000012198)	MAS1 (ENSOANG00000012996)	IGF2R (ENSOANG00000007296)
Sauria	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428 #18	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Episquamata	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Elapidae	ANCESTRAL SPECIES		ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.vc #25	ENSGT00940000165162.a	ENSGT00940000174968	ENSGT00940000154481.a.b.uc #25	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.vc #25	ENSGT00940000165162.a	ENSGT00940000174968	ENSGT00940000154481.a.b.uc #25	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244
Eastern brown snake	MODERN SPECIES	26	SNX9 (ENSPTXG00000013387)	ZDHHC14 (ENSPTXG00000013386) #9	TMEM242 (ENSPTXG00000013385) #10	ARID1B (ENSPTXG00000013384) #11	NOX3 (ENSPTXG00000013382) #12	CLDN20 (ENSPTXG00000013381)	TFB1M (ENSPTXG00000013379) #13	TIAM2 (ENSPTXG00000013375) #14	SCAF8 (ENSPTXG00000013371) #15	ENSPTXG00000013369	ENSPTXG00000013368	OPRM1 (ENSPTXG00000013366) #19	ENSPTXG00000013364	RGS17 (ENSPTXG00000013362) #20	MTRF1L (ENSPTXG00000013360) #21	FBXO5 (ENSPTXG00000013358) #22	VIP (ENSPTXG00000013357) #23	MYCT1 (ENSPTXG00000013355) #24	SYNE1 (ENSPTXG00000012015) #25	ESR1 (ENSPTXG00000011984) #26	CCDC170 (ENSPTXG00000011981) #27	ARMT1 (ENSPTXG00000011979) #28	RMND1 (ENSPTXG00000011977) #29	ZBTB2 (ENSPTXG00000011976) #30	AKAP12 (ENSPTXG00000011975)
Mainland tiger snake	MODERN SPECIES	130							NOX3 (ENSNSUG00000011886) #12	CLDN20 (ENSNSUG00000011885)	TFB1M (ENSNSUG00000011876) #13	TIAM2 (ENSNSUG00000011875) #14	SCAF8 (ENSNSUG00000011721) #15	ENSNSUG00000011640	OPRM1 (ENSNSUG00000011638) #19	RGS17 (ENSNSUG00000011636) #20	MTRF1L (ENSNSUG00000011635) #21	FBXO5 (ENSNSUG00000011634) #22	VIP (ENSNSUG00000011614) #23	MYCT1 (ENSNSUG00000011612) #24	ENSNSUG00000011594 #25	ENSNSUG00000011593	ENSNSUG00000011592	ENSNSUG00000011591 #25	ENSNSUG00000011587 #25	ESR1 (ENSNSUG00000011583) #26	ARMT1 (ENSNSUG00000011562) #28	ENSNSUG00000011560	ENSNSUG00000011558 #29	ZBTB2 (ENSNSUG00000011556) #30	ENSNSUG00000011555
Blue-lipped sea krait	MODERN SPECIES	140															MTRF1L (ENSLLTG00000002283) #21	FBXO5 (ENSLLTG00000002288) #22
Indian cobra	MODERN SPECIES		TMEM242 (ENSNNAG00000000057) #10	ENSNNAG00000000060 #11	ENSNNAG00000000062 #11	NOX3 (ENSNNAG00000000065) #12	TFB1M (ENSNNAG00000000070) #13	CLDN20 (ENSNNAG00000000073)	TIAM2 (ENSNNAG00000000085) #14	SCAF8 (ENSNNAG00000000099) #15	ENSNNAG00000000107	ENSNNAG00000000113	OPRM1 (ENSNNAG00000000115) #19	ENSNNAG00000000118	ENSNNAG00000000120	RGS17 (ENSNNAG00000000122) #20	MTRF1L (ENSNNAG00000000123) #21	FBXO5 (ENSNNAG00000000132) #22	VIP (ENSNNAG00000000134) #23	MYCT1 (ENSNNAG00000000136) #24	ENSNNAG00000000142 #25	ESR1 (ENSNNAG00000000145) #26	CCDC170 (ENSNNAG00000000148) #27	ARMT1 (ENSNNAG00000000149) #28	RMND1 (ENSNNAG00000000151) #29	ZBTB2 (ENSNNAG00000000152) #30	ENSNNAG00000000153	MTHFD1L (ENSNNAG00000000154) #31	PLEKHG1 (ENSNNAG00000000156) #32	IYD (ENSNNAG00000000160) #33	PPP1R14C (ENSNNAG00000000163) #34	LRP11 (ENSNNAG00000000167) #36	PCMT1 (ENSNNAG00000000170) #37
Lizard	MODERN SPECIES		ENSACAG00000034908	NOX3 (ENSACAG00000005196) #12	TFB1M (ENSACAG00000045406) #13	CLDN20 (ENSACAG00000005273)	TIAM2 (ENSACAG00000005274) #14	SCAF8 (ENSACAG00000005282) #15	ENSACAG00000005456	ENSACAG00000039263	ENSACAG00000041930	OPRM1 (ENSACAG00000005494) #19	ENSACAG00000039724	ENSACAG00000042018	ENSACAG00000045432	RGS17 (ENSACAG00000005532) #20	MTRF1L (ENSACAG00000005557) #21	FBXO5 (ENSACAG00000005635) #22	VIP (ENSACAG00000005619) #23	MYCT1 (ENSACAG00000005641) #24	ENSACAG00000043733	PLD5 (ENSACAG00000003356)	map1lc3c (ENSACAG00000043121)	EXO1 (ENSACAG00000003422)	WDR64 (ENSACAG00000003432)	OPN3 (ENSACAG00000003462)	ENSACAG00000041950	ENSACAG00000039600	ENSACAG00000043183	ENSACAG00000044583	ENSACAG00000003466	RGS7 (ENSACAG00000003468)	ENSACAG00000028807
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133.j #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Common wall lizard	MODERN SPECIES	11	ZDHHC14 (ENSPMRG00000011013) #9	ENSPMRG00000011010	ENSPMRG00000011008	TMEM242 (ENSPMRG00000010935) #10	ARID1B (ENSPMRG00000010882) #11	NOX3 (ENSPMRG00000010851) #12	CLDN20 (ENSPMRG00000010841)	TFB1M (ENSPMRG00000010835) #13	TIAM2 (ENSPMRG00000010821) #14	SCAF8 (ENSPMRG00000010796) #15	ENSPMRG00000010784	ENSPMRG00000010775	OPRM1 (ENSPMRG00000010770) #19	RGS17 (ENSPMRG00000010763) #20	MTRF1L (ENSPMRG00000010758) #21	FBXO5 (ENSPMRG00000010755) #22	VIP (ENSPMRG00000010751) #23	MYCT1 (ENSPMRG00000010748) #24	ENSPMRG00000010603 #25	ENSPMRG00000010559	ENSPMRG00000010555 #25	ENSPMRG00000010543 #25	ENSPMRG00000010538 #26	CCDC170 (ENSPMRG00000010531) #27	ENSPMRG00000010528 #28	ENSPMRG00000010523 #28	ENSPMRG00000010520 #28	RMND1 (ENSPMRG00000010516) #29	ZBTB2 (ENSPMRG00000010513) #30	AKAP12 (ENSPMRG00000010510)	MTHFD1L (ENSPMRG00000010497) #31
Argentine black and white tegu	MODERN SPECIES	2	ZDHHC14 (ENSSMRG00000022245) #9	TMEM242 (ENSSMRG00000022247) #10	ARID1B (ENSSMRG00000022250) #11	ENSSMRG00000022459	NOX3 (ENSSMRG00000022461) #12	TFB1M (ENSSMRG00000022468) #13	CLDN20 (ENSSMRG00000022469)	TIAM2 (ENSSMRG00000022470) #14	SCAF8 (ENSSMRG00000022475) #15	ENSSMRG00000022478	ENSSMRG00000022479	OPRM1 (ENSSMRG00000022480) #19	ENSSMRG00000022481	RGS17 (ENSSMRG00000022485) #20	MTRF1L (ENSSMRG00000022486) #21	FBXO5 (ENSSMRG00000022487) #22	VIP (ENSSMRG00000022488) #23	MYCT1 (ENSSMRG00000022489) #24	ENSSMRG00000022490 #25	ENSSMRG00000022621 #25	ESR1 (ENSSMRG00000022622) #26	CCDC170 (ENSSMRG00000022623) #27	ARMT1 (ENSSMRG00000022624) #28	RMND1 (ENSSMRG00000022625) #29	ZBTB2 (ENSSMRG00000022626) #30	AKAP12 (ENSSMRG00000022627)	MTHFD1L (ENSSMRG00000022628) #31	PLEKHG1 (ENSSMRG00000022629) #32	IYD (ENSSMRG00000022630) #33	PPP1R14C (ENSSMRG00000022632) #34	LRP11 (ENSSMRG00000022633) #36
tuatara	MODERN SPECIES	1416													ENSSPUG00000014666	RGS17 (ENSSPUG00000014655) #20	MTRF1L (ENSSPUG00000014563) #21	FBXO5 (ENSSPUG00000014516) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000156557	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Aves	ANCESTRAL SPECIES	12	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Anatidae	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501.a #12	ENSGT00940000160501.b #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Duck	MODERN SPECIES	21	SNX9 (ENSAPLG00000015762)	ZDHHC14 (ENSAPLG00000015573) #9	TMEM242 (ENSAPLG00000021932) #10	ARID1B (ENSAPLG00000007574) #11	ENSAPLG00000029287	NOX3 (ENSAPLG00000006709) #12	CLDN20 (ENSAPLG00000000733)	TFB1M (ENSAPLG00000006328) #13	TIAM2 (ENSAPLG00000005802) #14	SCAF8 (ENSAPLG00000005765) #15	ENSAPLG00000006234	ENSAPLG00000015652	ENSAPLG00000024843	RGS17 (ENSAPLG00000007077) #20	MTRF1L (ENSAPLG00000007043) #21	FBXO5 (ENSAPLG00000006998) #22	VIP (ENSAPLG00000006708) #23	MYCT1 (ENSAPLG00000020316) #24	ENSAPLG00000006495 #25	ENSAPLG00000029426	ENSAPLG00000017874	ENSAPLG00000020483	ENSAPLG00000027425	ENSAPLG00000019803 #25	ENSAPLG00000017771 #25	ESR1 (ENSAPLG00000004585) #26	CCDC170 (ENSAPLG00000011938) #27	ARMT1 (ENSAPLG00000011927) #28	RMND1 (ENSAPLG00000011834) #29	ZBTB2 (ENSAPLG00000011819) #30	AKAP12 (ENSAPLG00000020224)
Pink-footed goose	MODERN SPECIES	2	ZDHHC14 (ENSABRG00000004532) #9	TMEM242 (ENSABRG00000004553) #10	ARID1B (ENSABRG00000004619) #11	ENSABRG00000004777 #12	ENSABRG00000004798 #12	TFB1M (ENSABRG00000004813) #13	CLDN20 (ENSABRG00000004825)	TIAM2 (ENSABRG00000004837) #14	SCAF8 (ENSABRG00000004887) #15	ENSABRG00000004920	ENSABRG00000004935	ENSABRG00000004958	OPRM1 (ENSABRG00000004981) #19	RGS17 (ENSABRG00000005008) #20	MTRF1L (ENSABRG00000005018) #21	FBXO5 (ENSABRG00000005041) #22	VIP (ENSABRG00000005071) #23	MYCT1 (ENSABRG00000005084) #24	SYNE1 (ENSABRG00000005369) #25	ESR1 (ENSABRG00000008623) #26	CCDC170 (ENSABRG00000008853) #27	ARMT1 (ENSABRG00000008870) #28	RMND1 (ENSABRG00000008884) #29	ZBTB2 (ENSABRG00000008902) #30	AKAP12 (ENSABRG00000008911)	MTHFD1L (ENSABRG00000008938) #31	PLEKHG1 (ENSABRG00000008984) #32	IYD (ENSABRG00000009070) #33	PPP1R14C (ENSABRG00000009084) #34	LRP11 (ENSABRG00000009107) #36	PCMT1 (ENSABRG00000009117) #37
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723.y #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723.y #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Chicken	MODERN SPECIES	22	SNX9 (ENSGALG00010006157)	ZDHHC14 (ENSGALG00010006081) #9	TMEM242 (ENSGALG00010006070) #10	ARID1B (ENSGALG00010004101) #11	NOX3 (ENSGALG00010005345) #12	CLDN20 (ENSGALG00010005328)	TFB1M (ENSGALG00010005322) #13	TIAM2 (ENSGALG00010005307) #14	SCAF8 (ENSGALG00010005305) #15	ENSGALG00010005288	IPCEF1 (ENSGALG00010005277)	OPRM1 (ENSGALG00010005256) #19	ENSGALG00010006635	RGS17 (ENSGALG00010006411) #20	MTRF1L (ENSGALG00010005251) #21	FBXO5 (ENSGALG00010005244) #22	VIP (ENSGALG00010005240) #23	MYCT1 (ENSGALG00010005226) #24	ENSGALG00010007201 #25	ENSGALG00010005224 ##25	ENSGALG00010007190 ##25	ENSGALG00010005216	ENSGALG00010005213 #25	ENSGALG00010005203 #25	ESR1 (ENSGALG00010005186) #26	CCDC170 (ENSGALG00010005141) #27	ARMT1 (ENSGALG00010005779) #28	RMND1 (ENSGALG00010005752) #29	ZBTB2 (ENSGALG00010005716) #30	AKAP12 (ENSGALG00010005704)	MTHFD1L (ENSGALG00010005610) #31
Japanese quail	MODERN SPECIES	21	SERAC1 (ENSCJPG00005008277)	SYNJ2 (ENSCJPG00005007912)	SNX9 (ENSCJPG00005007904)	ZDHHC14 (ENSCJPG00005007862) #9	TMEM242 (ENSCJPG00005007847) #10	ARID1B (ENSCJPG00005007834) #11	NOX3 (ENSCJPG00005007803) #12	TFB1M (ENSCJPG00005007800) #13	TIAM2 (ENSCJPG00005007794) #14	SCAF8 (ENSCJPG00005007787) #15	ENSCJPG00005007764	ENSCJPG00005007757	OPRM1 (ENSCJPG00005007753) #19	RGS17 (ENSCJPG00005007740) #20	MTRF1L (ENSCJPG00005007734) #21	FBXO5 (ENSCJPG00005007733) #22	VIP (ENSCJPG00005007731) #23	MYCT1 (ENSCJPG00005007730) #24	ENSCJPG00005007605 #25	ENSCJPG00005007549 #25	ESR1 (ENSCJPG00005007531) #26	CCDC170 (ENSCJPG00005007525) #27	RMND1 (ENSCJPG00005007512) #29	ZBTB2 (ENSCJPG00005007510) #30	AKAP12 (ENSCJPG00005007509)	MTHFD1L (ENSCJPG00005006446) #31	PLEKHG1 (ENSCJPG00005006423) #32	IYD (ENSCJPG00005006409) #33	PPP1R14C (ENSCJPG00005006377) #34	LRP11 (ENSCJPG00005006308) #36	PCMT1 (ENSCJPG00005006305) #37
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
Golden eagle	MODERN SPECIES	24	SYNJ2 (ENSACCG00020008525)	SNX9 (ENSACCG00020008421)	ZDHHC14 (ENSACCG00020008401) #9	TMEM242 (ENSACCG00020008388) #10	ARID1B (ENSACCG00020008028) #11	NOX3 (ENSACCG00020007609) #12	CLDN20 (ENSACCG00020007593)	TFB1M (ENSACCG00020007584) #13	TIAM2 (ENSACCG00020007567) #14	SCAF8 (ENSACCG00020007542) #15	ENSACCG00020007527	ENSACCG00020007507	OPRM1 (ENSACCG00020007494) #19	RGS17 (ENSACCG00020007480) #20	MTRF1L (ENSACCG00020007439) #21	FBXO5 (ENSACCG00020007364) #22	VIP (ENSACCG00020007352) #23	MYCT1 (ENSACCG00020007328) #24	SYNE1 (ENSACCG00020006416) #25	ESR1 (ENSACCG00020005342) #26	CCDC170 (ENSACCG00020005320) #27	ARMT1 (ENSACCG00020005308) #28	RMND1 (ENSACCG00020005297) #29	ZBTB2 (ENSACCG00020005841) #30	AKAP12 (ENSACCG00020005819)	MTHFD1L (ENSACCG00020005759) #31	PLEKHG1 (ENSACCG00020005704) #32	IYD (ENSACCG00020005672) #33	PPP1R14C (ENSACCG00020005640) #34	LRP11 (ENSACCG00020005620) #36	PCMT1 (ENSACCG00020005602) #37
Kakapo	MODERN SPECIES	2	SNX9 (ENSSHBG00005011583)	ZDHHC14 (ENSSHBG00005011607) #9	TMEM242 (ENSSHBG00005011626) #10	ARID1B (ENSSHBG00005011654) #11	ENSSHBG00005011723	NOX3 (ENSSHBG00005011761) #12	TFB1M (ENSSHBG00005011837) #13	CLDN20 (ENSSHBG00005011859)	TIAM2 (ENSSHBG00005011875) #14	SCAF8 (ENSSHBG00005011942) #15	ENSSHBG00005012066	ENSSHBG00005012130	OPRM1 (ENSSHBG00005012145) #19	RGS17 (ENSSHBG00005012171) #20	MTRF1L (ENSSHBG00005012193) #21	FBXO5 (ENSSHBG00005012219) #22	VIP (ENSSHBG00005012244) #23	MYCT1 (ENSSHBG00005012266) #24	SYNE1 (ENSSHBG00005013775) #25	ESR1 (ENSSHBG00005018449) #26	CCDC170 (ENSSHBG00005018463) #27	ARMT1 (ENSSHBG00005018468) #28	RMND1 (ENSSHBG00005018472) #29	ZBTB2 (ENSSHBG00005018476) #30	AKAP12 (ENSSHBG00005018480)	MTHFD1L (ENSSHBG00005018498) #31	ENSSHBG00005018545	PLEKHG1 (ENSSHBG00005018548) #32	IYD (ENSSHBG00005018551) #33	PPP1R14C (ENSSHBG00005018557) #34	LRP11 (ENSSHBG00005018560) #36
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Common canary	MODERN SPECIES	31	SNX9 (ENSSCAG00000014101)	ZDHHC14 (ENSSCAG00000014093) #9	TMEM242 (ENSSCAG00000014088) #10	ARID1B (ENSSCAG00000013941) #11	NOX3 (ENSSCAG00000013853) #12	CLDN20 (ENSSCAG00000013847)	TFB1M (ENSSCAG00000013838) #13	ENSSCAG00000013832	TIAM2 (ENSSCAG00000013824) #14	SCAF8 (ENSSCAG00000013808) #15	ENSSCAG00000013785	ENSSCAG00000013768	OPRM1 (ENSSCAG00000013760) #19	RGS17 (ENSSCAG00000013756) #20	MTRF1L (ENSSCAG00000013752) #21	FBXO5 (ENSSCAG00000013747) #22	VIP (ENSSCAG00000013737) #23	MYCT1 (ENSSCAG00000013731) #24	SYNE1 (ENSSCAG00000012054) #25	ESR1 (ENSSCAG00000011670) #26	CCDC170 (ENSSCAG00000011646) #27	ARMT1 (ENSSCAG00000011639) #28	ENSSCAG00000011637	RMND1 (ENSSCAG00000011631) #29	ZBTB2 (ENSSCAG00000011626) #30	AKAP12 (ENSSCAG00000011615)	MTHFD1L (ENSSCAG00000011453) #31	PLEKHG1 (ENSSCAG00000011409) #32	IYD (ENSSCAG00000011402) #33	PPP1R14C (ENSSCAG00000011401) #34	LRP11 (ENSSCAG00000011398) #36
Medium ground finch	MODERN SPECIES	19	SERAC1 (ENSGFOG00000000900)	SYNJ2 (ENSGFOG00000000925)	SNX9 (ENSGFOG00000000967)	ZDHHC14 (ENSGFOG00000000987) #9	TMEM242 (ENSGFOG00000001001) #10	ARID1B (ENSGFOG00000001017) #11	NOX3 (ENSGFOG00000001065) #12	TFB1M (ENSGFOG00000001090) #13	CLDN20 (ENSGFOG00000001099)	TIAM2 (ENSGFOG00000001112) #14	ENSGFOG00000001172	ENSGFOG00000001195	OPRM1 (ENSGFOG00000001199) #19	RGS17 (ENSGFOG00000001204) #20	MTRF1L (ENSGFOG00000001223) #21	FBXO5 (ENSGFOG00000001261) #22	VIP (ENSGFOG00000001275) #23	MYCT1 (ENSGFOG00000001280) #24	SYNE1 (ENSGFOG00000001502) #25	ESR1 (ENSGFOG00000004320) #26
Flycatcher	MODERN SPECIES	21	SERAC1 (ENSFALG00000012595)	SYNJ2 (ENSFALG00000012593)	SNX9 (ENSFALG00000012564)	TMEM242 (ENSFALG00000024202) #10	ARID1B (ENSFALG00000012529) #11	NOX3 (ENSFALG00000012508) #12	TFB1M (ENSFALG00000023934) #13	CLDN20 (ENSFALG00000014941)	TIAM2 (ENSFALG00000012470) #14	SCAF8 (ENSFALG00000012433) #15	ENSFALG00000012421	IPCEF1 (ENSFALG00000026673)	OPRM1 (ENSFALG00000012411) #19	RGS17 (ENSFALG00000012407) #20	MTRF1L (ENSFALG00000012403) #21	FBXO5 (ENSFALG00000012397) #22	VIP (ENSFALG00000024261) #23	MYCT1 (ENSFALG00000015346) #24	SYNE1 (ENSFALG00000012360) #25	ESR1 (ENSFALG00000012305) #26	CCDC170 (ENSFALG00000012277) #27	ARMT1 (ENSFALG00000023321) #28	RMND1 (ENSFALG00000012263) #29	ZBTB2 (ENSFALG00000027296) #30	AKAP12 (ENSFALG00000012244)	MTHFD1L (ENSFALG00000012200) #31	PLEKHG1 (ENSFALG00000012185) #32	IYD (ENSFALG00000012182) #33	ENSFALG00000023388	LRP11 (ENSFALG00000023095) #36	PCMT1 (ENSFALG00000026300) #37
Great tit	MODERN SPECIES	22	SYNJ2 (ENSPMJG00000008772)	SNX9 (ENSPMJG00000008774)	ZDHHC14 (ENSPMJG00000008799) #9	TMEM242 (ENSPMJG00000008800) #10	ARID1B (ENSPMJG00000008818) #11	NOX3 (ENSPMJG00000008851) #12	TFB1M (ENSPMJG00000008934) #13	CLDN20 (ENSPMJG00000008935)	TIAM2 (ENSPMJG00000008936) #14	SCAF8 (ENSPMJG00000008939) #15	ENSPMJG00000008941	ENSPMJG00000008944	OPRM1 (ENSPMJG00000008946) #19	RGS17 (ENSPMJG00000008950) #20	MTRF1L (ENSPMJG00000008953) #21	FBXO5 (ENSPMJG00000008955) #22	VIP (ENSPMJG00000008960) #23	MYCT1 (ENSPMJG00000008961) #24	ENSPMJG00000008965 #25	ENSPMJG00000009003 #25	ESR1 (ENSPMJG00000009054) #26	CCDC170 (ENSPMJG00000009058) #27	ARMT1 (ENSPMJG00000009061) #28	RMND1 (ENSPMJG00000009063) #29	ZBTB2 (ENSPMJG00000009064) #30	AKAP12 (ENSPMJG00000009097)	MTHFD1L (ENSPMJG00000009104) #31	PLEKHG1 (ENSPMJG00000009185) #32	IYD (ENSPMJG00000009205) #33	PPP1R14C (ENSPMJG00000009207) #34	LRP11 (ENSPMJG00000009223) #36
African ostrich	MODERN SPECIES	394														RGS17 (ENSSCUG00000005882) #20	MTRF1L (ENSSCUG00000005885) #21	FBXO5 (ENSSCUG00000005886) #22	VIP (ENSSCUG00000005887) #23	MYCT1 (ENSSCUG00000005889) #24	ENSSCUG00000005891 #25	ENSSCUG00000005898 #25	ESR1 (ENSSCUG00000005902) #26	CCDC170 (ENSSCUG00000005904) #27	ENSSCUG00000005906 #28	ENSSCUG00000005907 #28	RMND1 (ENSSCUG00000005908) #29	ZBTB2 (ENSSCUG00000005909) #30	AKAP12 (ENSSCUG00000005911)	MTHFD1L (ENSSCUG00000005958) #31	PLEKHG1 (ENSSCUG00000006059) #32
Australian saltwater crocodile	MODERN SPECIES	60	ZDHHC14 (ENSCPRG00005017985) #9	TMEM242 (ENSCPRG00005017996) #10	ARID1B (ENSCPRG00005018008) #11	NOX3 (ENSCPRG00005018044) #12	ENSCPRG00005018059	TFB1M (ENSCPRG00005018062) #13	ENSCPRG00005018064	CLDN20 (ENSCPRG00005018068)	TIAM2 (ENSCPRG00005018071) #14	SCAF8 (ENSCPRG00005018086) #15	ENSCPRG00005018098	ENSCPRG00005018107	OPRM1 (ENSCPRG00005018110) #19	RGS17 (ENSCPRG00005018111) #20	MTRF1L (ENSCPRG00005018112) #21	FBXO5 (ENSCPRG00005018113) #22	VIP (ENSCPRG00005018118) #23	MYCT1 (ENSCPRG00005018122) #24	ENSCPRG00005018130 #25	ENSCPRG00005018146 #25	ESR1 (ENSCPRG00005018167) #26	CCDC170 (ENSCPRG00005018179) #27	ARMT1 (ENSCPRG00005018186) #28	RMND1 (ENSCPRG00005018189) #29	ZBTB2 (ENSCPRG00005018192) #30	AKAP12 (ENSCPRG00005018202)	MTHFD1L (ENSCPRG00005018210) #31	PLEKHG1 (ENSCPRG00005018218) #32	IYD (ENSCPRG00005018228) #33	PPP1R14C (ENSCPRG00005018235) #34	LRP11 (ENSCPRG00005018237) #36
Cryptodira	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000154428 #18	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36
Emydidae	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000161252	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34	ENSGT00940000161275 #36	ENSGT00950000183032.B.b.b #37
painted turtle	MODERN SPECIES	12	SYNJ2 (ENSCPBG00000016273)	SNX9 (ENSCPBG00000016279)	ZDHHC14 (ENSCPBG00000016281) #9	TMEM242 (ENSCPBG00000016288) #10	ARID1B (ENSCPBG00000016297) #11	NOX3 (ENSCPBG00000016318) #12	TFB1M (ENSCPBG00000016320) #13	CLDN20 (ENSCPBG00000016322)	TIAM2 (ENSCPBG00000016323) #14	SCAF8 (ENSCPBG00000016330) #15	ENSCPBG00000016337	ENSCPBG00000016339	OPRM1 (ENSCPBG00000016340) #19	RGS17 (ENSCPBG00000016347) #20	MTRF1L (ENSCPBG00000016349) #21	FBXO5 (ENSCPBG00000016351) #22	VIP (ENSCPBG00000016353) #23	MYCT1 (ENSCPBG00000016354) #24	ENSCPBG00000016384 #25	ENSCPBG00000016476 #25	ESR1 (ENSCPBG00000016495) #26	CCDC170 (ENSCPBG00000016507) #27	ARMT1 (ENSCPBG00000016517) #28	RMND1 (ENSCPBG00000016524) #29	ZBTB2 (ENSCPBG00000016532) #30	AKAP12 (ENSCPBG00000016538)	MTHFD1L (ENSCPBG00000016546) #31	PLEKHG1 (ENSCPBG00000016555) #32	IYD (ENSCPBG00000016570) #33	PPP1R14C (ENSCPBG00000016573) #34	LRP11 (ENSCPBG00000016581) #36
Three-toed box turtle	MODERN SPECIES	31	ZDHHC14 (ENSTMTG00000001723) #9	TMEM242 (ENSTMTG00000001730) #10	ARID1B (ENSTMTG00000001751) #11	NOX3 (ENSTMTG00000001834) #12	TFB1M (ENSTMTG00000001850) #13	CLDN20 (ENSTMTG00000001859)	TIAM2 (ENSTMTG00000001863) #14	SCAF8 (ENSTMTG00000001928) #15	ENSTMTG00000002146	ENSTMTG00000002153	ENSTMTG00000002165	ENSTMTG00000002172 #19	ENSTMTG00000002179 #19	RGS17 (ENSTMTG00000002186) #20	MTRF1L (ENSTMTG00000002218) #21	FBXO5 (ENSTMTG00000002290) #22	VIP (ENSTMTG00000002297) #23	MYCT1 (ENSTMTG00000002308) #24	ENSTMTG00000002319 #25	ENSTMTG00000002339	ENSTMTG00000002347	ENSTMTG00000002405 #25	ESR1 (ENSTMTG00000002657) #26	CCDC170 (ENSTMTG00000002659) #27	ARMT1 (ENSTMTG00000002665) #28	RMND1 (ENSTMTG00000002671) #29	ZBTB2 (ENSTMTG00000002675) #30	AKAP12 (ENSTMTG00000002678)	MTHFD1L (ENSTMTG00000002772) #31	ENSTMTG00000004099 #32	IYD (ENSTMTG00000004119) #33
Testudinidae	ANCESTRAL SPECIES	4	ENSGT01030000235099	ENSGT00940000156483 #9	ENSGT00390000008642 #10	ENSGT00940000155634 #11	ENSGT00940000160501 #12	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #13	ENSGT00940000157012 #14	ENSGT00530000063946.b #15	ENSGT00940000163429.D	ENSGT00940000154428 #18	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133.h #26	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244	ENSGT00940000157477 #31	ENSGT00940000157723 #32	ENSGT00390000004348 #33	ENSGT00950000182985.b.a #34
Abingdon island giant tortoise	MODERN SPECIES	284														RGS17 (ENSCABG00000007167) #20	MTRF1L (ENSCABG00000007168) #21	FBXO5 (ENSCABG00000007171) #22	VIP (ENSCABG00000007176) #23	MYCT1 (ENSCABG00000007201) #24	ENSCABG00000007204 #25	ENSCABG00000007210	ENSCABG00000007213	ENSCABG00000007218 #25	ENSCABG00000007223 #25	ESR1 (ENSCABG00000007260) #26
Goode s thornscrub tortoise	MODERN SPECIES	17	SNX9 (ENSGEVG00005020443)	ZDHHC14 (ENSGEVG00005020437) #9	TMEM242 (ENSGEVG00005020433) #10	ARID1B (ENSGEVG00005020376) #11	NOX3 (ENSGEVG00005020326) #12	CLDN20 (ENSGEVG00005020321)	TFB1M (ENSGEVG00005020318) #13	TIAM2 (ENSGEVG00005020313) #14	SCAF8 (ENSGEVG00005020295) #15	ENSGEVG00005020281	ENSGEVG00005020266	ENSGEVG00005020261 #19	ENSGEVG00005020259 #19	RGS17 (ENSGEVG00005020253) #20	MTRF1L (ENSGEVG00005020238) #21	FBXO5 (ENSGEVG00005020230) #22	VIP (ENSGEVG00005020226) #23	MYCT1 (ENSGEVG00005020222) #24	SYNE1 (ENSGEVG00005015272) #25	ESR1 (ENSGEVG00005013158) #26	CCDC170 (ENSGEVG00005012970) #27	ARMT1 (ENSGEVG00005012940) #28	RMND1 (ENSGEVG00005012911) #29	ZBTB2 (ENSGEVG00005012892) #30	AKAP12 (ENSGEVG00005012759)	MTHFD1L (ENSGEVG00005012612) #31	ENSGEVG00005012469 #32	IYD (ENSGEVG00005012422) #33	PPP1R14C (ENSGEVG00005012375) #34	LRP11 (ENSGEVG00005012143) #36	PCMT1 (ENSGEVG00005012105) #37
Chinese turtle	MODERN SPECIES	461	SNX9 (ENSPSIG00000011194)	ENSPSIG00000010386	ZDHHC14 (ENSPSIG00000010163) #9	TMEM242 (ENSPSIG00000009896) #10	ENSPSIG00000009413 #11	ENSPSIG00000009333 #11	NOX3 (ENSPSIG00000009070) #12	TFB1M (ENSPSIG00000006643) #13	TIAM2 (ENSPSIG00000009045) #14	SCAF8 (ENSPSIG00000008614) #15	ENSPSIG00000007371 #18	ENSPSIG00000006391	OPRM1 (ENSPSIG00000005901) #19	RGS17 (ENSPSIG00000005802) #20	MTRF1L (ENSPSIG00000005339) #21	FBXO5 (ENSPSIG00000005294) #22	ENSPSIG00000000120	VIP (ENSPSIG00000004987) #23	MYCT1 (ENSPSIG00000004949) #24	ENSPSIG00000004853 #25	ENSPSIG00000004808 #25	ENSPSIG00000004795	ENSPSIG00000004530 #25	ESR1 (ENSPSIG00000004166) #26	CCDC170 (ENSPSIG00000004116) #27	ARMT1 (ENSPSIG00000004092) #28	RMND1 (ENSPSIG00000018248) #29	ZBTB2 (ENSPSIG00000018246) #30	AKAP12 (ENSPSIG00000018242)	MTHFD1L (ENSPSIG00000018016) #31	PLEKHG1 (ENSPSIG00000017610) #32
Anura	ANCESTRAL SPECIES	63	ENSGT00940000162752	ENSGT00940000156258	ENSGT00530000063558.B	ENSGT00390000011877	ENSGT00390000013931	ENSGT01030000234626.B	ENSGT00550000074878	ENSGT00390000013943	ENSGT00940000155089	ENSGT01090000260098.A	ENSGT00390000011342	ENSGT00940000155621	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b #25	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00940000158401 #30	ENSGT00950000182906.b.a	ENSGT00390000014904	ENSGT00940000162477	ENSGT01030000234595.A.b	ENSGT00730000111123
Leishan spiny toad	MODERN SPECIES	7	SLC22A2 (ENSLLEG00000019681)	GJE1 (ENSLLEG00000019977)	VTA1 (ENSLLEG00000020067)	ENSLLEG00000020254	ENSLLEG00000020412	ENSLLEG00000022180	ENSLLEG00000022200	ENSLLEG00000022276	OPRM1 (ENSLLEG00000022332) #19	ENSLLEG00000022512	ENSLLEG00000022562	ENSLLEG00000022588	RGS17 (ENSLLEG00000022614) #20	ENSLLEG00000022666	MTRF1L (ENSLLEG00000022723) #21	FBXO5 (ENSLLEG00000022912) #22	VIP (ENSLLEG00000022987) #23	MYCT1 (ENSLLEG00000023136) #24	SYNE1 (ENSLLEG00000023244) #25	ESR1 (ENSLLEG00000025142) #26	ENSLLEG00000025191	CCDC170 (ENSLLEG00000025215) #27	ENSLLEG00000025397	ZBTB2 (ENSLLEG00000025418) #30	STXBP5 (ENSLLEG00000025451)	ADGB (ENSLLEG00000025721)	RAB32 (ENSLLEG00000026313)	GRM1 (ENSLLEG00000026342)	ENSLLEG00000026410	ENSLLEG00000026498	ENSLLEG00000026758
Frog	MODERN SPECIES	5	utrn (ENSXETG00000022290)	ENSXETG00000048985	epm2a (ENSXETG00000017691)	birc6 (ENSXETG00000017697)	ENSXETG00000043085	ttc27 (ENSXETG00000017701)	ltbp1 (ENSXETG00000019349)	heatr5b (ENSXETG00000019350)	rasgrp3 (ENSXETG00000019354)	ENSXETG00000019357	ENSXETG00000042091	crim1 (ENSXETG00000010373)	gpatch11 (ENSXETG00000018544)	cebpzos (ENSXETG00000038064)	mtrf1l (ENSXETG00000018541) #21	fbxo5 (ENSXETG00000018545) #22	vip (ENSXETG00000027906) #23	myct1 (ENSXETG00000031735) #24	syne1 (ENSXETG00000012367) #25	esr1 (ENSXETG00000012364) #26	stxbp5 (ENSXETG00000029924)	ccdc170 (ENSXETG00000014590) #27	zbtb2 (ENSXETG00000012362) #30	adgb (ENSXETG00000047736)	rab32 (ENSXETG00000007893)	grm1 (ENSXETG00000007892)	ENSXETG00000045386	shprh (ENSXETG00000025060)	sult6b1.5 (ENSXETG00000030952)	tbc1d32 (ENSXETG00000007886)	sult6b1.2 (ENSXETG00000025065)
Coelacanth	MODERN SPECIES	1749														ENSLACG00000006971	MTRF1L (ENSLACG00000007118) #21	FBXO5 (ENSLACG00000009820) #22