Glires	ANCESTRAL SPECIES	5	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Lesser Egyptian jerboa	MODERN SPECIES	44	Snx9 (ENSJJAG00000022587) #7	Zdhhc14 (ENSJJAG00000010246) #8	Tmem242 (ENSJJAG00000010583) #9	Arid1b (ENSJJAG00000023167) #10	Nox3 (ENSJJAG00000020165) #11	Tfb1m (ENSJJAG00000022171) #12	Tiam2 (ENSJJAG00000022310) #13	Scaf8 (ENSJJAG00000020480) #14	ENSJJAG00000012164 #15	Cnksr3 (ENSJJAG00000023905) #16	ENSJJAG00000012246 #17	Oprm1 (ENSJJAG00000024159) #18	Ipcef1 (ENSJJAG00000001014) #19	Rgs17 (ENSJJAG00000009873) #20	Mtrf1l (ENSJJAG00000024141) #21	Fbxo5 (ENSJJAG00000006490) #22	ENSJJAG00000005271 #23	Vip (ENSJJAG00000018682) #24	Myct1 (ENSJJAG00000022731) #25	Syne1 (ENSJJAG00000014032) #26	ENSJJAG00000010411 #27	Esr1 (ENSJJAG00000015406) #28	ENSJJAG00000011473 #29	ENSJJAG00000015720 #30	Rmnd1 (ENSJJAG00000008798) #31	Zbtb2 (ENSJJAG00000016308) #32	Akap12 (ENSJJAG00000021521) #33	Mthfd1l (ENSJJAG00000014266) #34	Plekhg1 (ENSJJAG00000023794) #35	ENSJJAG00000024322 #36	Ppp1r14c (ENSJJAG00000020290) #37
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000161252	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Northern American deer mouse	MODERN SPECIES	7	Snx9 (ENSPEMG00000018518) #7	Zdhhc14 (ENSPEMG00000019121) #8	Tmem242 (ENSPEMG00000016796) #9	Arid1b (ENSPEMG00000008950) #10	ENSPEMG00000014483	Nox3 (ENSPEMG00000010502) #11	ENSPEMG00000030418	Tfb1m (ENSPEMG00000010410) #12	Tiam2 (ENSPEMG00000019186) #13	Scaf8 (ENSPEMG00000010531) #14	Cnksr3 (ENSPEMG00000009492) #16	Ipcef1 (ENSPEMG00000017460) #19	Oprm1 (ENSPEMG00000013691) #18	Rgs17 (ENSPEMG00000002088) #20	Mtrf1l (ENSPEMG00000018112) #21	Fbxo5 (ENSPEMG00000017534) #22	ENSPEMG00000005147	Vip (ENSPEMG00000007974) #24	Myct1 (ENSPEMG00000016041) #25	ENSPEMG00000007014 #26	ENSPEMG00000013933	ENSPEMG00000029017 #26	ENSPEMG00000000704 #26	Esr1 (ENSPEMG00000012747) #28	ENSPEMG00000028412	Ccdc170 (ENSPEMG00000018858) #29	Armt1 (ENSPEMG00000027664) ##30	Rmnd1 (ENSPEMG00000014544) #31	Zbtb2 (ENSPEMG00000028248) #32	ENSPEMG00000028722 #33	Mthfd1l (ENSPEMG00000012428) #34
Prairie vole	MODERN SPECIES	358	Synj2 (ENSMOCG00000020054)	Snx9 (ENSMOCG00000021777) #7	Zdhhc14 (ENSMOCG00000010952) #8	Tmem242 (ENSMOCG00000011673) #9	Arid1b (ENSMOCG00000017619) #10	Nox3 (ENSMOCG00000002324) #11	Tfb1m (ENSMOCG00000013879) #12	ENSMOCG00000017009	Tiam2 (ENSMOCG00000019544) #13	Scaf8 (ENSMOCG00000014950) #14	Cnksr3 (ENSMOCG00000020668) #16	Ipcef1 (ENSMOCG00000015115) #19	Oprm1 (ENSMOCG00000009671) #18	Rgs17 (ENSMOCG00000013891) #20	Mtrf1l (ENSMOCG00000016147) #21	Fbxo5 (ENSMOCG00000016622) #22	Vip (ENSMOCG00000000402) #24	Myct1 (ENSMOCG00000003327) #25	Syne1 (ENSMOCG00000003007) #26	Esr1 (ENSMOCG00000004623) #28	ENSMOCG00000008666	Ccdc170 (ENSMOCG00000015340) #29	Armt1 (ENSMOCG00000008335) ##30	Rmnd1 (ENSMOCG00000012373) #31	Zbtb2 (ENSMOCG00000018175) #32	ENSMOCG00000019373 #33	Mthfd1l (ENSMOCG00000011918) #34	Plekhg1 (ENSMOCG00000006027) #35	Iyd (ENSMOCG00000012475) #36	Ppp1r14c (ENSMOCG00000002551) #37	ENSMOCG00000008070
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000165162	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275
Chinese hamster chok1gshd	MODERN SPECIES	1	Snx9 (ENSCGRG00001001484) #7	Zdhhc14 (ENSCGRG00001000563) #8	Tmem242 (ENSCGRG00001024838) #9	Arid1b (ENSCGRG00001024894) #10	Nox3 (ENSCGRG00001023896) #11	ENSCGRG00001008208	Tfb1m (ENSCGRG00001022866) #12	Tiam2 (ENSCGRG00001023036) #13	Scaf8 (ENSCGRG00001020167) #14	Cnksr3 (ENSCGRG00001012107) #16	Ipcef1 (ENSCGRG00001002463) #19	Oprm1 (ENSCGRG00001003333) #18	ENSCGRG00001007014	Rgs17 (ENSCGRG00001008622) #20	Mtrf1l (ENSCGRG00001024662) #21	Fbxo5 (ENSCGRG00001024225) #22	Vip (ENSCGRG00001023726) #24	Myct1 (ENSCGRG00001007389) #25	ENSCGRG00001017406 #26	ENSCGRG00001016292	ENSCGRG00001024508 #26	Esr1 (ENSCGRG00001024268) #28	Ccdc170 (ENSCGRG00001019582) #29	Armt1 (ENSCGRG00001019042) ##30	Rmnd1 (ENSCGRG00001018312) #31	Zbtb2 (ENSCGRG00001023273) #32	Akap12 (ENSCGRG00001022879) #33	Mthfd1l (ENSCGRG00001022372) #34	Plekhg1 (ENSCGRG00001023431) #35	Iyd (ENSCGRG00001022969) #36	Ppp1r14c (ENSCGRG00001022707) #37
Golden Hamster	MODERN SPECIES	621	Zdhhc14 (ENSMAUG00000018645) #8	Tmem242 (ENSMAUG00000006231) #9	Arid1b (ENSMAUG00000017697) #10	ENSMAUG00000015104	Nox3 (ENSMAUG00000013920) #11	ENSMAUG00000009291	Tfb1m (ENSMAUG00000006705) #12	Tiam2 (ENSMAUG00000016491) #13	Scaf8 (ENSMAUG00000009513) #14	Cnksr3 (ENSMAUG00000017992) #16	ENSMAUG00000008972	Ipcef1 (ENSMAUG00000020692) #19	Oprm1 (ENSMAUG00000016741) #18	ENSMAUG00000021559	Mtrf1l (ENSMAUG00000017702) #21	Fbxo5 (ENSMAUG00000000824) #22	Vip (ENSMAUG00000014470) #24	Myct1 (ENSMAUG00000014906) #25	ENSMAUG00000019847 #26	ENSMAUG00000012320	ENSMAUG00000014937 #26	Esr1 (ENSMAUG00000006785) #28	Ccdc170 (ENSMAUG00000008640) #29	Armt1 (ENSMAUG00000012945) ##30	Rmnd1 (ENSMAUG00000011585) #31	Zbtb2 (ENSMAUG00000008627) #32	ENSMAUG00000020409 #33	Mthfd1l (ENSMAUG00000016191) #34	ENSMAUG00000011570 #35	Iyd (ENSMAUG00000013810) #36	Ppp1r14c (ENSMAUG00000019718) #37
Murinae	ANCESTRAL SPECIES	29	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37
Mus	ANCESTRAL SPECIES	15	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b	ENSGT00940000161275	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b	ENSGT00940000161275	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401.a #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b	ENSGT00940000161275	ENSGT01100000263531.A	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401.a #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.c.x	ENSGT00940000169591.d
Mouse	MODERN SPECIES	1	Tab2 (ENSMUSG00000015755)	Zc3h12d (ENSMUSG00000039981)	Ppil4 (ENSMUSG00000015757)	Ginm1 (ENSMUSG00000040006)	Katna1 (ENSMUSG00000019794)	Lats1 (ENSMUSG00000040021)	Nup43 (ENSMUSG00000040034)	Pcmt1 (ENSMUSG00000019795)	Lrp11 (ENSMUSG00000019796)	Ulbp1 (ENSMUSG00000079685)	Cnksr3 (ENSMUSG00000015202) #16	Ipcef1 (ENSMUSG00000064065) #19	Oprm1 (ENSMUSG00000000766) #18	Rgs17 (ENSMUSG00000019775) #20	Mtrf1l (ENSMUSG00000019774) #21	Fbxo5 (ENSMUSG00000019773) #22	Vip (ENSMUSG00000019772) #24	Myct1 (ENSMUSG00000046916) #25	Syne1 (ENSMUSG00000096054) #26	Esr1 (ENSMUSG00000019768) #28	Ccdc170 (ENSMUSG00000019767) #29	Armt1 (ENSMUSG00000061759) ##30	Rmnd1 (ENSMUSG00000019763) #31	Zbtb2 (ENSMUSG00000075327) #32	Akap12 (ENSMUSG00000038587) #33	Mthfd1l (ENSMUSG00000040675) #34	Plekhg1 (ENSMUSG00000040624) #35	Iyd (ENSMUSG00000019762) #36	Ppp1r14c (ENSMUSG00000040653) #37	H60c (ENSMUSG00000091618)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b	ENSGT00940000161275	ENSGT01100000263531.A	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401.a #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.c.x	ENSGT00940000169591.d
Steppe mouse	MODERN SPECIES	3108	Ginm1 (ENSMSIG00000025038)	Katna1 (ENSMSIG00000025062)	Lats1 (ENSMSIG00000025078)	ENSMSIG00000025088	Nup43 (ENSMSIG00000025146)	Lrp11 (ENSMSIG00000025159)	ENSMSIG00000025191	ENSMSIG00000025199	Cnksr3 (ENSMSIG00000025229) #16	Oprm1 (ENSMSIG00000025261) #18	Ipcef1 (ENSMSIG00000025435) #19	ENSMSIG00000025467	ENSMSIG00000025479	Rgs17 (ENSMSIG00000025486) #20	Mtrf1l (ENSMSIG00000025539) #21	Fbxo5 (ENSMSIG00000025556) #22
spretus	MODERN SPECIES	1	Tab2 (MGP_SPRETEiJ_G0015912)	Zc3h12d (MGP_SPRETEiJ_G0015911)	Ppil4 (MGP_SPRETEiJ_G0015910)	Ginm1 (MGP_SPRETEiJ_G0015909)	Katna1 (MGP_SPRETEiJ_G0015908)	Lats1 (MGP_SPRETEiJ_G0015907)	Nup43 (MGP_SPRETEiJ_G0015906)	MGP_SPRETEiJ_G0015905	Lrp11 (MGP_SPRETEiJ_G0015904)	MGP_SPRETEiJ_G0015903	Cnksr3 (MGP_SPRETEiJ_G0015902) #16	Ipcef1 (MGP_SPRETEiJ_G0015901) #19	Oprm1 (MGP_SPRETEiJ_G0015900) #18	Rgs17 (MGP_SPRETEiJ_G0015899) #20	Mtrf1l (MGP_SPRETEiJ_G0015898) #21	Fbxo5 (MGP_SPRETEiJ_G0015897) #22	Vip (MGP_SPRETEiJ_G0015896) #24	Myct1 (MGP_SPRETEiJ_G0015895) #25	MGP_SPRETEiJ_G0015893	Esr1 (MGP_SPRETEiJ_G0015891) #28	Ccdc170 (MGP_SPRETEiJ_G0015890) #29	Armt1 (MGP_SPRETEiJ_G0015889) ##30	Rmnd1 (MGP_SPRETEiJ_G0015888) #31	Zbtb2 (MGP_SPRETEiJ_G0015887) #32	Akap12 (MGP_SPRETEiJ_G0015886) #33	Mthfd1l (MGP_SPRETEiJ_G0015885) #34	Plekhg1 (MGP_SPRETEiJ_G0015884) #35	Iyd (MGP_SPRETEiJ_G0015883) #36	Ppp1r14c (MGP_SPRETEiJ_G0015882) #37	MGP_SPRETEiJ_G0015881	MGP_SPRETEiJ_G0015880
Ryukyu mouse	MODERN SPECIES	1	Ust (MGP_CAROLIEiJ_G0015106)	Tab2 (MGP_CAROLIEiJ_G0015105)	Zc3h12d (MGP_CAROLIEiJ_G0015104)	Ppil4 (MGP_CAROLIEiJ_G0015103)	Ginm1 (MGP_CAROLIEiJ_G0015102)	MGP_CAROLIEiJ_G0015101	Lats1 (MGP_CAROLIEiJ_G0015100)	Nup43 (MGP_CAROLIEiJ_G0015099)	MGP_CAROLIEiJ_G0015098	Lrp11 (MGP_CAROLIEiJ_G0015097)	Cnksr3 (MGP_CAROLIEiJ_G0015096) #16	Ipcef1 (MGP_CAROLIEiJ_G0015095) #19	Oprm1 (MGP_CAROLIEiJ_G0015094) #18	Rgs17 (MGP_CAROLIEiJ_G0015093) #20	Mtrf1l (MGP_CAROLIEiJ_G0015092) #21	Fbxo5 (MGP_CAROLIEiJ_G0015091) #22	Vip (MGP_CAROLIEiJ_G0015090) #24	Myct1 (MGP_CAROLIEiJ_G0015089) #25	MGP_CAROLIEiJ_G0015088	MGP_CAROLIEiJ_G0015087 #26	Esr1 (MGP_CAROLIEiJ_G0015086) #28	Ccdc170 (MGP_CAROLIEiJ_G0015085) #29	Armt1 (MGP_CAROLIEiJ_G0015084) ##30	Rmnd1 (MGP_CAROLIEiJ_G0015083) #31	Zbtb2 (MGP_CAROLIEiJ_G0015082) #32	Akap12 (MGP_CAROLIEiJ_G0015081) #33	Mthfd1l (MGP_CAROLIEiJ_G0015080) #34	Plekhg1 (MGP_CAROLIEiJ_G0015079) #35	Iyd (MGP_CAROLIEiJ_G0015078) #36	Ppp1r14c (MGP_CAROLIEiJ_G0015077) #37
Shrew mouse	MODERN SPECIES	13	Ust (MGP_PahariEiJ_G0023725)	MGP_PahariEiJ_G0023724	Zc3h12d (MGP_PahariEiJ_G0023723)	Ppil4 (MGP_PahariEiJ_G0023722)	Ginm1 (MGP_PahariEiJ_G0023721)	Katna1 (MGP_PahariEiJ_G0023720)	Lats1 (MGP_PahariEiJ_G0023719)	Nup43 (MGP_PahariEiJ_G0023718)	Pcmt1 (MGP_PahariEiJ_G0023717)	Lrp11 (MGP_PahariEiJ_G0023716)	Cnksr3 (MGP_PahariEiJ_G0023715) #16	Ipcef1 (MGP_PahariEiJ_G0023714) #19	Oprm1 (MGP_PahariEiJ_G0023713) #18	Rgs17 (MGP_PahariEiJ_G0023712) #20	Mtrf1l (MGP_PahariEiJ_G0023711) #21	Fbxo5 (MGP_PahariEiJ_G0023710) #22	Vip (MGP_PahariEiJ_G0023709) #24	Myct1 (MGP_PahariEiJ_G0023708) #25	MGP_PahariEiJ_G0023707	MGP_PahariEiJ_G0023706 #26	Esr1 (MGP_PahariEiJ_G0023705) #28	MGP_PahariEiJ_G0023704 #29	Armt1 (MGP_PahariEiJ_G0023703) ##30	MGP_PahariEiJ_G0023702	Zbtb2 (MGP_PahariEiJ_G0023701) #32	Akap12 (MGP_PahariEiJ_G0023700) #33	Mthfd1l (MGP_PahariEiJ_G0023699) #34	Plekhg1 (MGP_PahariEiJ_G0023698) #35	Iyd (MGP_PahariEiJ_G0023697) #36	Ppp1r14c (MGP_PahariEiJ_G0023696) #37	Rrp1b (MGP_PahariEiJ_G0023695)
Rat	MODERN SPECIES		Arid1b (ENSRNOG00000017030) #10	ENSRNOG00000064039	Nox3 (ENSRNOG00000016490) #11	Cldn20 (ENSRNOG00000023531)	Tfb1m (ENSRNOG00000056223) #12	Tiam2 (ENSRNOG00000016728) #13	Scaf8 (ENSRNOG00000016919) #14	AABR07001435.1 (ENSRNOG00000004144)	Cnksr3 (ENSRNOG00000018052) #16	Ipcef1 (ENSRNOG00000018163) #19	Oprm1 (ENSRNOG00000018191) #18	ENSRNOG00000070385	AABR07001408.1 (ENSRNOG00000033265)	Rgs17 (ENSRNOG00000018690) #20	Mtrf1l (ENSRNOG00000018773) #21	Fbxo5 (ENSRNOG00000024077) #22	Vip (ENSRNOG00000018808) #24	Myct1 (ENSRNOG00000018858) #25	Syne1 (ENSRNOG00000018960) #26	Esr1 (ENSRNOG00000019358) #28	Ccdc170 (ENSRNOG00000024280) #29	Armt1 (ENSRNOG00000019489) ##30	Rmnd1 (ENSRNOG00000019501) #31	Zbtb2 (ENSRNOG00000019544) #32	Akap12 (ENSRNOG00000019549) #33	Mthfd1l (ENSRNOG00000019582) #34	Plekhg1 (ENSRNOG00000016011) #35	Iyd (ENSRNOG00000016286) #36	Ppp1r14c (ENSRNOG00000016368) #37	AABR07001348.1 (ENSRNOG00000023081)	ENSRNOG00000070838
Upper Galilee mountains blind mole rat	MODERN SPECIES	1702									ENSNGAG00000010422	Scaf8 (ENSNGAG00000012332) #14	Cnksr3 (ENSNGAG00000015876) #16	Ipcef1 (ENSNGAG00000019303) #19	Oprm1 (ENSNGAG00000007044) #18	Rgs17 (ENSNGAG00000020948) #20	Mtrf1l (ENSNGAG00000021373) #21	Fbxo5 (ENSNGAG00000015908) #22	Vip (ENSNGAG00000022783) #24	Myct1 (ENSNGAG00000014265) #25	ENSNGAG00000015778 #26
Kangaroo rat	MODERN SPECIES	417			Zdhhc14 (ENSDORG00000024450) #8	Tmem242 (ENSDORG00000023296) #9	Arid1b (ENSDORG00000014985) #10	Nox3 (ENSDORG00000009803) #11	Tfb1m (ENSDORG00000012938) #12	Tiam2 (ENSDORG00000012933) #13	Scaf8 (ENSDORG00000006391) #14	ENSDORG00000027053	Cnksr3 (ENSDORG00000008824) #16	Ipcef1 (ENSDORG00000023655) #19	Oprm1 (ENSDORG00000002315) #18	Rgs17 (ENSDORG00000011002) #20	Mtrf1l (ENSDORG00000010997) #21	Fbxo5 (ENSDORG00000000495) #22	Vip (ENSDORG00000015940) #24	Myct1 (ENSDORG00000027276) #25	Syne1 (ENSDORG00000013226) #26	Esr1 (ENSDORG00000010443) #28	Ccdc170 (ENSDORG00000014673) #29	ENSDORG00000000434 ##30	ENSDORG00000025869 #31	Zbtb2 (ENSDORG00000013305) #32	Mthfd1l (ENSDORG00000006234) #34	ENSDORG00000029716 #35	Iyd (ENSDORG00000016201) #36	Ppp1r14c (ENSDORG00000029153) #37	ENSDORG00000023774	Lrp11 (ENSDORG00000003139)	Pcmt1 (ENSDORG00000003137)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000161252	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000163242	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000161252	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b.dc #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00940000161275
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b.dc #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT00940000161275
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b.dc #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT00940000161275	ENSGT00950000183032.B.b.b
Long-tailed chinchilla	MODERN SPECIES	146	SNX9 (ENSCLAG00000007699) #7	ZDHHC14 (ENSCLAG00000008670) #8	TMEM242 (ENSCLAG00000008760) #9	ARID1B (ENSCLAG00000009054) #10	NOX3 (ENSCLAG00000010279) #11	TFB1M (ENSCLAG00000004500) #12	TIAM2 (ENSCLAG00000004676) #13	SCAF8 (ENSCLAG00000004910) #14	CNKSR3 (ENSCLAG00000005496) #16	IPCEF1 (ENSCLAG00000005711) #19	OPRM1 (ENSCLAG00000003007) #18	ENSCLAG00000003114	RGS17 (ENSCLAG00000003266) #20	MTRF1L (ENSCLAG00000003779) #21	ENSCLAG00000003820	FBXO5 (ENSCLAG00000003927) #22	ENSCLAG00000004035	VIP (ENSCLAG00000004151) #24	MYCT1 (ENSCLAG00000004202) #25	ENSCLAG00000002479 #26	ENSCLAG00000002568	ENSCLAG00000002772 #26	ESR1 (ENSCLAG00000003026) #28	CCDC170 (ENSCLAG00000003105) #29	ARMT1 (ENSCLAG00000003161) ##30	ENSCLAG00000003248	ZBTB2 (ENSCLAG00000003435) #32	AKAP12 (ENSCLAG00000003496) #33	MTHFD1L (ENSCLAG00000003603) #34	PLEKHG1 (ENSCLAG00000004103) #35	IYD (ENSCLAG00000002712) #36
Guinea pig	MODERN SPECIES	41	SERAC1 (ENSCPOG00000011203)	SYNJ2 (ENSCPOG00000009144)	SNX9 (ENSCPOG00000007921) #7	ZDHHC14 (ENSCPOG00000038809) #8	TMEM242 (ENSCPOG00000036571) #9	ARID1B (ENSCPOG00000031246) #10	NOX3 (ENSCPOG00000001003) #11	CLDN20 (ENSCPOG00000031831)	TFB1M (ENSCPOG00000030422) #12	TIAM2 (ENSCPOG00000009654) #13	ENSCPOG00000022216 #14	CNKSR3 (ENSCPOG00000039022) #16	IPCEF1 (ENSCPOG00000003418) #19	OPRM1 (ENSCPOG00000008135) #18	RGS17 (ENSCPOG00000003312) #20	FBXO5 (ENSCPOG00000007680) #22	VIP (ENSCPOG00000002991) #24	MYCT1 (ENSCPOG00000036928) #25	ENSCPOG00000032322 #26	ENSCPOG00000008325	ENSCPOG00000039266 #26	ESR1 (ENSCPOG00000008317) #28	CCDC170 (ENSCPOG00000008222) #29	ARMT1 (ENSCPOG00000040489) ##30	ENSCPOG00000005849	ZBTB2 (ENSCPOG00000034799) #32	AKAP12 (ENSCPOG00000005547) #33	MTHFD1L (ENSCPOG00000010056) #34	PLEKHG1 (ENSCPOG00000010045) #35	ENSCPOG00000035414	KIAA0408 (ENSCPOG00000020737)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		TFB1M (ENSHGLG00000002028) #12	CLDN20 (ENSHGLG00000019987)	TIAM2 (ENSHGLG00000002352) #13	ENSHGLG00000042832	SCAF8 (ENSHGLG00000003619) #14	ENSHGLG00000050628	ENSHGLG00000039109	CNKSR3 (ENSHGLG00000003681) #16	IPCEF1 (ENSHGLG00000004122) #19	Oprm1 (ENSHGLG00000005417) #18	ENSHGLG00000006115	ENSHGLG00000033230	RGS17 (ENSHGLG00000007180) #20	ENSHGLG00000003207 #21	ENSHGLG00000003375	FBXO5 (ENSHGLG00000003460) #22	ENSHGLG00000003666	VIP (ENSHGLG00000003764) #24	MYCT1 (ENSHGLG00000003966) #25	ENSHGLG00000004180 #26	ENSHGLG00000047622 #26	ENSHGLG00000041227	ENSHGLG00000005683 #26	ESR1 (ENSHGLG00000001873) #28	ENSHGLG00000016358	ENSHGLG00000046338	CCDC170 (ENSHGLG00000002356) #29	ARMT1 (ENSHGLG00000046933) ##30	RMND1 (ENSHGLG00000006256) #31	ZBTB2 (ENSHGLG00000041496) #32	AKAP12 (ENSHGLG00000008686) #33
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000002100	ENSHGLG00000000784	ENSHGLG00000001957	ENSHGLG00000040150	ENSHGLG00000045137	ENSHGLG00000000688	ENSHGLG00000047507	ENSHGLG00000045873	ENSHGLG00000047504	RTTN (ENSHGLG00000017738)	ENSHGLG00000000780	ENSHGLG00000048215	ENSHGLG00000046795	ENSHGLG00000000334	ENSHGLG00000000388	ENSHGLG00000045031 #22	ENSHGLG00000025635	ENSHGLG00000002454	ENSHGLG00000049270	ENSHGLG00000044324	DSEL (ENSHGLG00000001302)	ENSHGLG00000035367	ENSHGLG00000044063	CDH19 (ENSHGLG00000001249)	CDH7 (ENSHGLG00000001169)	SERPINB8 (ENSHGLG00000050036)	SERPINB2 (ENSHGLG00000001127)	SERPINB7 (ENSHGLG00000002536)	SERPINB11 (ENSHGLG00000002502)	ENSHGLG00000002364	SERPINB4 (ENSHGLG00000035185)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000161252	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.d.b	ENSGT01100000263517.b.d.m.a.a.a.a.c
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT01100000263517.b.d.m.a.a.a.a.d.b
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37	ENSGT01100000263517.b.d.m.a.a.a.a.c	ENSGT00940000161275
Squirrel	MODERN SPECIES	89	TMEM242 (ENSSTOG00000021519) #9	ARID1B (ENSSTOG00000015979) #10	ENSSTOG00000031965	NOX3 (ENSSTOG00000000798) #11	CLDN20 (ENSSTOG00000000795)	TFB1M (ENSSTOG00000026264) #12	TIAM2 (ENSSTOG00000000784) #13	SCAF8 (ENSSTOG00000026043) #14	ENSSTOG00000029860	ENSSTOG00000025472	CNKSR3 (ENSSTOG00000029212) #16	IPCEF1 (ENSSTOG00000000419) #19	OPRM1 (ENSSTOG00000000418) #18	RGS17 (ENSSTOG00000009988) #20	MTRF1L (ENSSTOG00000009980) #21	FBXO5 (ENSSTOG00000029069) #22	VIP (ENSSTOG00000007656) #24	MYCT1 (ENSSTOG00000010644) #25	ENSSTOG00000034176 #26	ENSSTOG00000006796	ENSSTOG00000030302 #26	ESR1 (ENSSTOG00000006748) #28	CCDC170 (ENSSTOG00000013161) #29	ARMT1 (ENSSTOG00000013153) ##30	RMND1 (ENSSTOG00000013141) #31	ZBTB2 (ENSSTOG00000021611) #32	AKAP12 (ENSSTOG00000029201) #33	MTHFD1L (ENSSTOG00000010921) #34	PLEKHG1 (ENSSTOG00000010912) #35	IYD (ENSSTOG00000002022) #36	PPP1R14C (ENSSTOG00000002019) #37
Arctic ground squirrel	MODERN SPECIES	219														RGS17 (ENSUPAG00010012932) #20	MTRF1L (ENSUPAG00010012945) #21	FBXO5 (ENSUPAG00010012958) #22	VIP (ENSUPAG00010012967) #24	MYCT1 (ENSUPAG00010012980) #25	SYNE1 (ENSUPAG00010012988) #26	ESR1 (ENSUPAG00010013233) #28	CCDC170 (ENSUPAG00010013267) #29	ARMT1 (ENSUPAG00010013297) ##30	RMND1 (ENSUPAG00010013328) #31	ZBTB2 (ENSUPAG00010013345) #32	AKAP12 (ENSUPAG00010013348) #33	MTHFD1L (ENSUPAG00010013390) #34	PLEKHG1 (ENSUPAG00010013492) #35	IYD (ENSUPAG00010013543) #36	ENSUPAG00010013564 #37
Alpin marmot	MODERN SPECIES	2								SCAF8 (ENSMMMG00000004108) #14	ENSMMMG00000004079	CNKSR3 (ENSMMMG00000004049) #16	IPCEF1 (ENSMMMG00000003986) #19	OPRM1 (ENSMMMG00000003833) #18	ENSMMMG00000003794	RGS17 (ENSMMMG00000003762) #20	MTRF1L (ENSMMMG00000003749) #21	FBXO5 (ENSMMMG00000003740) #22	VIP (ENSMMMG00000003724) #24	MYCT1 (ENSMMMG00000003699) #25	ENSMMMG00000003653 #26	ENSMMMG00000003589	ENSMMMG00000003544 #26	ENSMMMG00000003497 #26	ESR1 (ENSMMMG00000003430) #28	CCDC170 (ENSMMMG00000003378) #29	ARMT1 (ENSMMMG00000003333) ##30	RMND1 (ENSMMMG00000003297) #31	ZBTB2 (ENSMMMG00000003286) #32	AKAP12 (ENSMMMG00000003251) #33	MTHFD1L (ENSMMMG00000003062) #34	PLEKHG1 (ENSMMMG00000003011) #35	IYD (ENSMMMG00000002984) #36
Eurasian red squirrel	MODERN SPECIES	16	ZDHHC14 (ENSSVLG00005018722) #8	TMEM242 (ENSSVLG00005018773) #9	ARID1B (ENSSVLG00005018938) #10	ENSSVLG00005019380	ENSSVLG00005019405	NOX3 (ENSSVLG00005019493) #11	TFB1M (ENSSVLG00005019605) #12	CLDN20 (ENSSVLG00005019651)	TIAM2 (ENSSVLG00005019741) #13	SCAF8 (ENSSVLG00005019879) #14	CNKSR3 (ENSSVLG00005020289) #16	IPCEF1 (ENSSVLG00005020412) #19	OPRM1 (ENSSVLG00005020650) #18	RGS17 (ENSSVLG00005020849) #20	ENSSVLG00005020917 #21	FBXO5 (ENSSVLG00005021108) #22	ENSSVLG00005021174	VIP (ENSSVLG00005021260) #24	MYCT1 (ENSSVLG00005021349) #25	ENSSVLG00005021418 #26	ENSSVLG00005010938	ENSSVLG00005010970 #26	ENSSVLG00005011101 #26	ESR1 (ENSSVLG00005011518) #28	CCDC170 (ENSSVLG00005011680) #29	ARMT1 (ENSSVLG00005011814) ##30	RMND1 (ENSSVLG00005011890) #31	ZBTB2 (ENSSVLG00005011964) #32	AKAP12 (ENSSVLG00005012004) #33	MTHFD1L (ENSSVLG00005012073) #34	PLEKHG1 (ENSSVLG00005012201) #35
Lagomorpha	ANCESTRAL SPECIES	64	ENSGT00940000160715	ENSGT00940000156557 #7	ENSGT00940000156483 #8	ENSGT00390000008642 #9	ENSGT00940000155634 #10	ENSGT00940000160501 #11	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a #12	ENSGT00940000157012 #13	ENSGT00530000063946.b #14	ENSGT00940000154428.a #16	ENSGT00940000154428.b #19	ENSGT00940000158236 #18	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #24	ENSGT00390000011642 #25	ENSGT00940000154481.a.b #26	ENSGT00940000158133 #28	ENSGT00390000012924.a #29	ENSGT00530000064023.b ##30	ENSGT00390000013337 #31	ENSGT00940000158401 #32	ENSGT00730000111244 #33	ENSGT00940000157477 #34	ENSGT00940000157723 #35	ENSGT00390000004348 #36	ENSGT00950000182985.b.a #37
Rabbit	MODERN SPECIES	3	ENSOCUG00000031993	TMEM242 (ENSOCUG00000024736) #9	ARID1B (ENSOCUG00000008879) #10	NOX3 (ENSOCUG00000001440) #11	CLDN20 (ENSOCUG00000012158)	ENSOCUG00000036620	TFB1M (ENSOCUG00000012154) #12	ENSOCUG00000012137 #13	SCAF8 (ENSOCUG00000026063) #14	CNKSR3 (ENSOCUG00000009042) #16	ENSOCUG00000037750	IPCEF1 (ENSOCUG00000016038) #19	OPRM1 (ENSOCUG00000016025) #18	RGS17 (ENSOCUG00000021054) #20	ENSOCUG00000000063 #21	FBXO5 (ENSOCUG00000000061) #22	VIP (ENSOCUG00000000513) #24	MYCT1 (ENSOCUG00000017753) #25	ENSOCUG00000038464	SYNE1 (ENSOCUG00000023878) #26	ESR1 (ENSOCUG00000004829) #28	ENSOCUG00000022327	CCDC170 (ENSOCUG00000013530) #29	ENSOCUG00000036064	ARMT1 (ENSOCUG00000002519) ##30	RMND1 (ENSOCUG00000002509) #31	ZBTB2 (ENSOCUG00000022931) #32	AKAP12 (ENSOCUG00000002673) #33	MTHFD1L (ENSOCUG00000002781) #34	PLEKHG1 (ENSOCUG00000016898) #35	IYD (ENSOCUG00000013408) #36
Pika	MODERN SPECIES	10163															RGS17 (ENSOPRG00000003799) #20	FBXO5 (ENSOPRG00000003783) #22