Chordata	ANCESTRAL SPECIES																	ENSGT00530000063692 #22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063692.b #22
Gnathostomata	ANCESTRAL SPECIES	288								ENSGT00940000157628	ENSGT00390000002789	ENSGT00940000161511	ENSGT00390000013215	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000159974	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24
Euteleostomi	ANCESTRAL SPECIES	62										ENSGT00940000157628	ENSGT00390000002789	ENSGT00940000161511	ENSGT00390000013215	ENSGT00940000158236 #19	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000176900	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Sarcopterygii	ANCESTRAL SPECIES	99														ENSGT00940000158236 #19	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000176900	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Tetrapoda	ANCESTRAL SPECIES	95														ENSGT00940000158236 #19	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Amniota	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428 #17	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Theria	ANCESTRAL SPECIES	4	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d ##36	ENSGT00940000161275 #15
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Glires	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Murinae	ANCESTRAL SPECIES	29	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Mus	ANCESTRAL SPECIES	15	ENSGT00530000063408.A	ENSGT00940000158473 #7	ENSGT00940000161388 #8	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #12	ENSGT00390000004803 #13	ENSGT00950000183032.B.b.b #14	ENSGT00940000161275 #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Mus_A	ANCESTRAL SPECIES	11	ENSGT00530000063408.A	ENSGT00940000158473 #7	ENSGT00940000161388 #8	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #12	ENSGT00390000004803 #13	ENSGT00950000183032.B.b.b #14	ENSGT00940000161275 #15	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000158473 #7	ENSGT00940000161388 #8	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #12	ENSGT00390000004803 #13	ENSGT00950000183032.B.b.b #14	ENSGT00940000161275 #15	ENSGT01100000263531.A #16	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c.x #36	ENSGT00940000169591.d
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000158473 #7	ENSGT00940000161388 #8	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #12	ENSGT00390000004803 #13	ENSGT00950000183032.B.b.b #14	ENSGT00940000161275 #15	ENSGT01100000263531.A #16	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401.a #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c.x #36	ENSGT00940000169591.d
spretus	MODERN SPECIES	1	Tab2 (MGP_SPRETEiJ_G0015912) #7	Zc3h12d (MGP_SPRETEiJ_G0015911) #8	Ppil4 (MGP_SPRETEiJ_G0015910) #9	Ginm1 (MGP_SPRETEiJ_G0015909) #10	Katna1 (MGP_SPRETEiJ_G0015908) #11	Lats1 (MGP_SPRETEiJ_G0015907) #12	Nup43 (MGP_SPRETEiJ_G0015906) #13	MGP_SPRETEiJ_G0015905 #14	Lrp11 (MGP_SPRETEiJ_G0015904) #15	MGP_SPRETEiJ_G0015903 #16	Cnksr3 (MGP_SPRETEiJ_G0015902) #17	Ipcef1 (MGP_SPRETEiJ_G0015901) #18	Oprm1 (MGP_SPRETEiJ_G0015900) #19	Rgs17 (MGP_SPRETEiJ_G0015899) #20	Mtrf1l (MGP_SPRETEiJ_G0015898) #21	Fbxo5 (MGP_SPRETEiJ_G0015897) #22	Vip (MGP_SPRETEiJ_G0015896) #23	Myct1 (MGP_SPRETEiJ_G0015895) #24	MGP_SPRETEiJ_G0015893 #25	Esr1 (MGP_SPRETEiJ_G0015891) #26	Ccdc170 (MGP_SPRETEiJ_G0015890) #27	Armt1 (MGP_SPRETEiJ_G0015889) #28	Rmnd1 (MGP_SPRETEiJ_G0015888) #29	Zbtb2 (MGP_SPRETEiJ_G0015887) #30	Akap12 (MGP_SPRETEiJ_G0015886) #31	Mthfd1l (MGP_SPRETEiJ_G0015885) #32	Plekhg1 (MGP_SPRETEiJ_G0015884) #33	Iyd (MGP_SPRETEiJ_G0015883) #34	Ppp1r14c (MGP_SPRETEiJ_G0015882) #35	MGP_SPRETEiJ_G0015881 #36	MGP_SPRETEiJ_G0015880 #37
Steppe mouse	MODERN SPECIES	3108	Ginm1 (ENSMSIG00000025038) #10	Katna1 (ENSMSIG00000025062) #11	Lats1 (ENSMSIG00000025078) #12	ENSMSIG00000025088 #14	Nup43 (ENSMSIG00000025146) #13	Lrp11 (ENSMSIG00000025159) #15	ENSMSIG00000025191	ENSMSIG00000025199	Cnksr3 (ENSMSIG00000025229) #17	Oprm1 (ENSMSIG00000025261) #19	Ipcef1 (ENSMSIG00000025435) #18	ENSMSIG00000025467	ENSMSIG00000025479	Rgs17 (ENSMSIG00000025486) #20	Mtrf1l (ENSMSIG00000025539) #21	Fbxo5 (ENSMSIG00000025556) #22
Mouse	MODERN SPECIES	1	Tab2 (ENSMUSG00000015755) #7	Zc3h12d (ENSMUSG00000039981) #8	Ppil4 (ENSMUSG00000015757) #9	Ginm1 (ENSMUSG00000040006) #10	Katna1 (ENSMUSG00000019794) #11	Lats1 (ENSMUSG00000040021) #12	Nup43 (ENSMUSG00000040034) #13	Pcmt1 (ENSMUSG00000019795) #14	Lrp11 (ENSMUSG00000019796) #15	Ulbp1 (ENSMUSG00000079685) #16	Cnksr3 (ENSMUSG00000015202) #17	Ipcef1 (ENSMUSG00000064065) #18	Oprm1 (ENSMUSG00000000766) #19	Rgs17 (ENSMUSG00000019775) #20	Mtrf1l (ENSMUSG00000019774) #21	Fbxo5 (ENSMUSG00000019773) #22	Vip (ENSMUSG00000019772) #23	Myct1 (ENSMUSG00000046916) #24	Syne1 (ENSMUSG00000096054)	Esr1 (ENSMUSG00000019768) #26	Ccdc170 (ENSMUSG00000019767) #27	Armt1 (ENSMUSG00000061759) #28	Rmnd1 (ENSMUSG00000019763) #29	Zbtb2 (ENSMUSG00000075327) #30	Akap12 (ENSMUSG00000038587) #31	Mthfd1l (ENSMUSG00000040675) #32	Plekhg1 (ENSMUSG00000040624) #33	Iyd (ENSMUSG00000019762) #34	Ppp1r14c (ENSMUSG00000040653) #35	H60c (ENSMUSG00000091618)
Ryukyu mouse	MODERN SPECIES	1	Ust (MGP_CAROLIEiJ_G0015106)	Tab2 (MGP_CAROLIEiJ_G0015105) #7	Zc3h12d (MGP_CAROLIEiJ_G0015104) #8	Ppil4 (MGP_CAROLIEiJ_G0015103) #9	Ginm1 (MGP_CAROLIEiJ_G0015102) #10	MGP_CAROLIEiJ_G0015101 #11	Lats1 (MGP_CAROLIEiJ_G0015100) #12	Nup43 (MGP_CAROLIEiJ_G0015099) #13	MGP_CAROLIEiJ_G0015098 #14	Lrp11 (MGP_CAROLIEiJ_G0015097) #15	Cnksr3 (MGP_CAROLIEiJ_G0015096) #17	Ipcef1 (MGP_CAROLIEiJ_G0015095) #18	Oprm1 (MGP_CAROLIEiJ_G0015094) #19	Rgs17 (MGP_CAROLIEiJ_G0015093) #20	Mtrf1l (MGP_CAROLIEiJ_G0015092) #21	Fbxo5 (MGP_CAROLIEiJ_G0015091) #22	Vip (MGP_CAROLIEiJ_G0015090) #23	Myct1 (MGP_CAROLIEiJ_G0015089) #24	MGP_CAROLIEiJ_G0015088	MGP_CAROLIEiJ_G0015087	Esr1 (MGP_CAROLIEiJ_G0015086) #26	Ccdc170 (MGP_CAROLIEiJ_G0015085) #27	Armt1 (MGP_CAROLIEiJ_G0015084) #28	Rmnd1 (MGP_CAROLIEiJ_G0015083) #29	Zbtb2 (MGP_CAROLIEiJ_G0015082) #30	Akap12 (MGP_CAROLIEiJ_G0015081) #31	Mthfd1l (MGP_CAROLIEiJ_G0015080) #32	Plekhg1 (MGP_CAROLIEiJ_G0015079) #33	Iyd (MGP_CAROLIEiJ_G0015078) #34	Ppp1r14c (MGP_CAROLIEiJ_G0015077) #35
Shrew mouse	MODERN SPECIES	13	Ust (MGP_PahariEiJ_G0023725)	MGP_PahariEiJ_G0023724 #7	Zc3h12d (MGP_PahariEiJ_G0023723) #8	Ppil4 (MGP_PahariEiJ_G0023722) #9	Ginm1 (MGP_PahariEiJ_G0023721) #10	Katna1 (MGP_PahariEiJ_G0023720) #11	Lats1 (MGP_PahariEiJ_G0023719) #12	Nup43 (MGP_PahariEiJ_G0023718) #13	Pcmt1 (MGP_PahariEiJ_G0023717) #14	Lrp11 (MGP_PahariEiJ_G0023716) #15	Cnksr3 (MGP_PahariEiJ_G0023715) #17	Ipcef1 (MGP_PahariEiJ_G0023714) #18	Oprm1 (MGP_PahariEiJ_G0023713) #19	Rgs17 (MGP_PahariEiJ_G0023712) #20	Mtrf1l (MGP_PahariEiJ_G0023711) #21	Fbxo5 (MGP_PahariEiJ_G0023710) #22	Vip (MGP_PahariEiJ_G0023709) #23	Myct1 (MGP_PahariEiJ_G0023708) #24	MGP_PahariEiJ_G0023707	MGP_PahariEiJ_G0023706	Esr1 (MGP_PahariEiJ_G0023705) #26	MGP_PahariEiJ_G0023704 #27	Armt1 (MGP_PahariEiJ_G0023703) #28	MGP_PahariEiJ_G0023702	Zbtb2 (MGP_PahariEiJ_G0023701) #30	Akap12 (MGP_PahariEiJ_G0023700) #31	Mthfd1l (MGP_PahariEiJ_G0023699) #32	Plekhg1 (MGP_PahariEiJ_G0023698) #33	Iyd (MGP_PahariEiJ_G0023697) #34	Ppp1r14c (MGP_PahariEiJ_G0023696) #35	Rrp1b (MGP_PahariEiJ_G0023695)
Rat	MODERN SPECIES		Arid1b (ENSRNOG00000017030)	ENSRNOG00000064039	Nox3 (ENSRNOG00000016490)	Cldn20 (ENSRNOG00000023531)	Tfb1m (ENSRNOG00000056223)	Tiam2 (ENSRNOG00000016728)	Scaf8 (ENSRNOG00000016919)	AABR07001435.1 (ENSRNOG00000004144)	Cnksr3 (ENSRNOG00000018052) #17	Ipcef1 (ENSRNOG00000018163) #18	Oprm1 (ENSRNOG00000018191) #19	ENSRNOG00000070385	AABR07001408.1 (ENSRNOG00000033265)	Rgs17 (ENSRNOG00000018690) #20	Mtrf1l (ENSRNOG00000018773) #21	Fbxo5 (ENSRNOG00000024077) #22	Vip (ENSRNOG00000018808) #23	Myct1 (ENSRNOG00000018858) #24	Syne1 (ENSRNOG00000018960)	Esr1 (ENSRNOG00000019358) #26	Ccdc170 (ENSRNOG00000024280) #27	Armt1 (ENSRNOG00000019489) #28	Rmnd1 (ENSRNOG00000019501) #29	Zbtb2 (ENSRNOG00000019544) #30	Akap12 (ENSRNOG00000019549) #31	Mthfd1l (ENSRNOG00000019582) #32	Plekhg1 (ENSRNOG00000016011) #33	Iyd (ENSRNOG00000016286) #34	Ppp1r14c (ENSRNOG00000016368) #35	AABR07001348.1 (ENSRNOG00000023081) #36	ENSRNOG00000070838
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Northern American deer mouse	MODERN SPECIES	7	Snx9 (ENSPEMG00000018518)	Zdhhc14 (ENSPEMG00000019121)	Tmem242 (ENSPEMG00000016796)	Arid1b (ENSPEMG00000008950)	ENSPEMG00000014483	Nox3 (ENSPEMG00000010502)	ENSPEMG00000030418	Tfb1m (ENSPEMG00000010410)	Tiam2 (ENSPEMG00000019186)	Scaf8 (ENSPEMG00000010531)	Cnksr3 (ENSPEMG00000009492) #17	Ipcef1 (ENSPEMG00000017460) #18	Oprm1 (ENSPEMG00000013691) #19	Rgs17 (ENSPEMG00000002088) #20	Mtrf1l (ENSPEMG00000018112) #21	Fbxo5 (ENSPEMG00000017534) #22	ENSPEMG00000005147	Vip (ENSPEMG00000007974) #23	Myct1 (ENSPEMG00000016041) #24	ENSPEMG00000007014	ENSPEMG00000013933	ENSPEMG00000029017	ENSPEMG00000000704	Esr1 (ENSPEMG00000012747) #26	ENSPEMG00000028412	Ccdc170 (ENSPEMG00000018858) #27	Armt1 (ENSPEMG00000027664) #28	Rmnd1 (ENSPEMG00000014544) #29	Zbtb2 (ENSPEMG00000028248) #30	ENSPEMG00000028722 #31	Mthfd1l (ENSPEMG00000012428) #32
Prairie vole	MODERN SPECIES	358	Synj2 (ENSMOCG00000020054)	Snx9 (ENSMOCG00000021777)	Zdhhc14 (ENSMOCG00000010952)	Tmem242 (ENSMOCG00000011673)	Arid1b (ENSMOCG00000017619)	Nox3 (ENSMOCG00000002324)	Tfb1m (ENSMOCG00000013879)	ENSMOCG00000017009	Tiam2 (ENSMOCG00000019544)	Scaf8 (ENSMOCG00000014950)	Cnksr3 (ENSMOCG00000020668) #17	Ipcef1 (ENSMOCG00000015115) #18	Oprm1 (ENSMOCG00000009671) #19	Rgs17 (ENSMOCG00000013891) #20	Mtrf1l (ENSMOCG00000016147) #21	Fbxo5 (ENSMOCG00000016622) #22	Vip (ENSMOCG00000000402) #23	Myct1 (ENSMOCG00000003327) #24	Syne1 (ENSMOCG00000003007)	Esr1 (ENSMOCG00000004623) #26	ENSMOCG00000008666	Ccdc170 (ENSMOCG00000015340) #27	Armt1 (ENSMOCG00000008335) #28	Rmnd1 (ENSMOCG00000012373) #29	Zbtb2 (ENSMOCG00000018175) #30	ENSMOCG00000019373 #31	Mthfd1l (ENSMOCG00000011918) #32	Plekhg1 (ENSMOCG00000006027) #33	Iyd (ENSMOCG00000012475) #34	Ppp1r14c (ENSMOCG00000002551) #35	ENSMOCG00000008070
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000165162	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Chinese hamster chok1gshd	MODERN SPECIES	1	Snx9 (ENSCGRG00001001484)	Zdhhc14 (ENSCGRG00001000563)	Tmem242 (ENSCGRG00001024838)	Arid1b (ENSCGRG00001024894)	Nox3 (ENSCGRG00001023896)	ENSCGRG00001008208	Tfb1m (ENSCGRG00001022866)	Tiam2 (ENSCGRG00001023036)	Scaf8 (ENSCGRG00001020167)	Cnksr3 (ENSCGRG00001012107) #17	Ipcef1 (ENSCGRG00001002463) #18	Oprm1 (ENSCGRG00001003333) #19	ENSCGRG00001007014	Rgs17 (ENSCGRG00001008622) #20	Mtrf1l (ENSCGRG00001024662) #21	Fbxo5 (ENSCGRG00001024225) #22	Vip (ENSCGRG00001023726) #23	Myct1 (ENSCGRG00001007389) #24	ENSCGRG00001017406	ENSCGRG00001016292	ENSCGRG00001024508	Esr1 (ENSCGRG00001024268) #26	Ccdc170 (ENSCGRG00001019582) #27	Armt1 (ENSCGRG00001019042) #28	Rmnd1 (ENSCGRG00001018312) #29	Zbtb2 (ENSCGRG00001023273) #30	Akap12 (ENSCGRG00001022879) #31	Mthfd1l (ENSCGRG00001022372) #32	Plekhg1 (ENSCGRG00001023431) #33	Iyd (ENSCGRG00001022969) #34	Ppp1r14c (ENSCGRG00001022707) #35
Golden Hamster	MODERN SPECIES	621	Zdhhc14 (ENSMAUG00000018645)	Tmem242 (ENSMAUG00000006231)	Arid1b (ENSMAUG00000017697)	ENSMAUG00000015104	Nox3 (ENSMAUG00000013920)	ENSMAUG00000009291	Tfb1m (ENSMAUG00000006705)	Tiam2 (ENSMAUG00000016491)	Scaf8 (ENSMAUG00000009513)	Cnksr3 (ENSMAUG00000017992) #17	ENSMAUG00000008972	Ipcef1 (ENSMAUG00000020692) #18	Oprm1 (ENSMAUG00000016741) #19	ENSMAUG00000021559	Mtrf1l (ENSMAUG00000017702) #21	Fbxo5 (ENSMAUG00000000824) #22	Vip (ENSMAUG00000014470) #23	Myct1 (ENSMAUG00000014906) #24	ENSMAUG00000019847	ENSMAUG00000012320	ENSMAUG00000014937	Esr1 (ENSMAUG00000006785) #26	Ccdc170 (ENSMAUG00000008640) #27	Armt1 (ENSMAUG00000012945) #28	Rmnd1 (ENSMAUG00000011585) #29	Zbtb2 (ENSMAUG00000008627) #30	ENSMAUG00000020409 #31	Mthfd1l (ENSMAUG00000016191) #32	ENSMAUG00000011570 #33	Iyd (ENSMAUG00000013810) #34	Ppp1r14c (ENSMAUG00000019718) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1702									ENSNGAG00000010422	Scaf8 (ENSNGAG00000012332)	Cnksr3 (ENSNGAG00000015876) #17	Ipcef1 (ENSNGAG00000019303) #18	Oprm1 (ENSNGAG00000007044) #19	Rgs17 (ENSNGAG00000020948) #20	Mtrf1l (ENSNGAG00000021373) #21	Fbxo5 (ENSNGAG00000015908) #22	Vip (ENSNGAG00000022783) #23	Myct1 (ENSNGAG00000014265) #24	ENSNGAG00000015778
Lesser Egyptian jerboa	MODERN SPECIES	44	Snx9 (ENSJJAG00000022587)	Zdhhc14 (ENSJJAG00000010246)	Tmem242 (ENSJJAG00000010583)	Arid1b (ENSJJAG00000023167)	Nox3 (ENSJJAG00000020165)	Tfb1m (ENSJJAG00000022171)	Tiam2 (ENSJJAG00000022310)	Scaf8 (ENSJJAG00000020480)	ENSJJAG00000012164	Cnksr3 (ENSJJAG00000023905) #17	ENSJJAG00000012246	Oprm1 (ENSJJAG00000024159) #19	Ipcef1 (ENSJJAG00000001014) #18	Rgs17 (ENSJJAG00000009873) #20	Mtrf1l (ENSJJAG00000024141) #21	Fbxo5 (ENSJJAG00000006490) #22	ENSJJAG00000005271	Vip (ENSJJAG00000018682) #23	Myct1 (ENSJJAG00000022731) #24	Syne1 (ENSJJAG00000014032)	ENSJJAG00000010411 #26	Esr1 (ENSJJAG00000015406) #26	ENSJJAG00000011473 #27	ENSJJAG00000015720 ##28	Rmnd1 (ENSJJAG00000008798) #29	Zbtb2 (ENSJJAG00000016308) #30	Akap12 (ENSJJAG00000021521) #31	Mthfd1l (ENSJJAG00000014266) #32	Plekhg1 (ENSJJAG00000023794) #33	ENSJJAG00000024322 #34	Ppp1r14c (ENSJJAG00000020290) #35
Kangaroo rat	MODERN SPECIES	417			Zdhhc14 (ENSDORG00000024450)	Tmem242 (ENSDORG00000023296)	Arid1b (ENSDORG00000014985)	Nox3 (ENSDORG00000009803)	Tfb1m (ENSDORG00000012938)	Tiam2 (ENSDORG00000012933)	Scaf8 (ENSDORG00000006391)	ENSDORG00000027053	Cnksr3 (ENSDORG00000008824) #17	Ipcef1 (ENSDORG00000023655) #18	Oprm1 (ENSDORG00000002315) #19	Rgs17 (ENSDORG00000011002) #20	Mtrf1l (ENSDORG00000010997) #21	Fbxo5 (ENSDORG00000000495) #22	Vip (ENSDORG00000015940) #23	Myct1 (ENSDORG00000027276) #24	Syne1 (ENSDORG00000013226)	Esr1 (ENSDORG00000010443) #26	Ccdc170 (ENSDORG00000014673) #27	ENSDORG00000000434 #28	ENSDORG00000025869 #29	Zbtb2 (ENSDORG00000013305) #30	Mthfd1l (ENSDORG00000006234) #32	ENSDORG00000029716 #33	Iyd (ENSDORG00000016201) #34	Ppp1r14c (ENSDORG00000029153) #35	ENSDORG00000023774	Lrp11 (ENSDORG00000003139) #15	Pcmt1 (ENSDORG00000003137) #14
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT00940000161275 #15
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT00940000161275 #15
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00440000039314.a.e.a.b	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.dc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Long-tailed chinchilla	MODERN SPECIES	146	SNX9 (ENSCLAG00000007699)	ZDHHC14 (ENSCLAG00000008670)	TMEM242 (ENSCLAG00000008760)	ARID1B (ENSCLAG00000009054)	NOX3 (ENSCLAG00000010279)	TFB1M (ENSCLAG00000004500)	TIAM2 (ENSCLAG00000004676)	SCAF8 (ENSCLAG00000004910)	CNKSR3 (ENSCLAG00000005496) #17	IPCEF1 (ENSCLAG00000005711) #18	OPRM1 (ENSCLAG00000003007) #19	ENSCLAG00000003114	RGS17 (ENSCLAG00000003266) #20	MTRF1L (ENSCLAG00000003779) #21	ENSCLAG00000003820	FBXO5 (ENSCLAG00000003927) #22	ENSCLAG00000004035	VIP (ENSCLAG00000004151) #23	MYCT1 (ENSCLAG00000004202) #24	ENSCLAG00000002479	ENSCLAG00000002568	ENSCLAG00000002772	ESR1 (ENSCLAG00000003026) #26	CCDC170 (ENSCLAG00000003105) #27	ARMT1 (ENSCLAG00000003161) #28	ENSCLAG00000003248	ZBTB2 (ENSCLAG00000003435) #30	AKAP12 (ENSCLAG00000003496) #31	MTHFD1L (ENSCLAG00000003603) #32	PLEKHG1 (ENSCLAG00000004103) #33	IYD (ENSCLAG00000002712) #34
Guinea pig	MODERN SPECIES	41	SERAC1 (ENSCPOG00000011203)	SYNJ2 (ENSCPOG00000009144)	SNX9 (ENSCPOG00000007921)	ZDHHC14 (ENSCPOG00000038809)	TMEM242 (ENSCPOG00000036571)	ARID1B (ENSCPOG00000031246)	NOX3 (ENSCPOG00000001003)	CLDN20 (ENSCPOG00000031831)	TFB1M (ENSCPOG00000030422)	TIAM2 (ENSCPOG00000009654)	ENSCPOG00000022216	CNKSR3 (ENSCPOG00000039022) #17	IPCEF1 (ENSCPOG00000003418) #18	OPRM1 (ENSCPOG00000008135) #19	RGS17 (ENSCPOG00000003312) #20	FBXO5 (ENSCPOG00000007680) #22	VIP (ENSCPOG00000002991) #23	MYCT1 (ENSCPOG00000036928) #24	ENSCPOG00000032322	ENSCPOG00000008325	ENSCPOG00000039266	ESR1 (ENSCPOG00000008317) #26	CCDC170 (ENSCPOG00000008222) #27	ARMT1 (ENSCPOG00000040489) #28	ENSCPOG00000005849	ZBTB2 (ENSCPOG00000034799) #30	AKAP12 (ENSCPOG00000005547) #31	MTHFD1L (ENSCPOG00000010056) #32	PLEKHG1 (ENSCPOG00000010045) #33	ENSCPOG00000035414	KIAA0408 (ENSCPOG00000020737)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		TFB1M (ENSHGLG00000002028)	CLDN20 (ENSHGLG00000019987)	TIAM2 (ENSHGLG00000002352)	ENSHGLG00000042832	SCAF8 (ENSHGLG00000003619)	ENSHGLG00000050628	ENSHGLG00000039109	CNKSR3 (ENSHGLG00000003681) #17	IPCEF1 (ENSHGLG00000004122) #18	Oprm1 (ENSHGLG00000005417) #19	ENSHGLG00000006115	ENSHGLG00000033230	RGS17 (ENSHGLG00000007180) #20	ENSHGLG00000003207 #21	ENSHGLG00000003375	FBXO5 (ENSHGLG00000003460) #22	ENSHGLG00000003666	VIP (ENSHGLG00000003764) #23	MYCT1 (ENSHGLG00000003966) #24	ENSHGLG00000004180	ENSHGLG00000047622	ENSHGLG00000041227	ENSHGLG00000005683	ESR1 (ENSHGLG00000001873) #26	ENSHGLG00000016358	ENSHGLG00000046338	CCDC170 (ENSHGLG00000002356) #27	ARMT1 (ENSHGLG00000046933) #28	RMND1 (ENSHGLG00000006256) #29	ZBTB2 (ENSHGLG00000041496) #30	AKAP12 (ENSHGLG00000008686) #31
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000002100	ENSHGLG00000000784	ENSHGLG00000001957	ENSHGLG00000040150	ENSHGLG00000045137	ENSHGLG00000000688	ENSHGLG00000047507	ENSHGLG00000045873	ENSHGLG00000047504	RTTN (ENSHGLG00000017738)	ENSHGLG00000000780	ENSHGLG00000048215	ENSHGLG00000046795	ENSHGLG00000000334	ENSHGLG00000000388	ENSHGLG00000045031 #22	ENSHGLG00000025635	ENSHGLG00000002454	ENSHGLG00000049270	ENSHGLG00000044324	DSEL (ENSHGLG00000001302)	ENSHGLG00000035367	ENSHGLG00000044063	CDH19 (ENSHGLG00000001249)	CDH7 (ENSHGLG00000001169)	SERPINB8 (ENSHGLG00000050036)	SERPINB2 (ENSHGLG00000001127)	SERPINB7 (ENSHGLG00000002536)	SERPINB11 (ENSHGLG00000002502)	ENSHGLG00000002364	SERPINB4 (ENSHGLG00000035185)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36	ENSGT00940000161275 #15
Squirrel	MODERN SPECIES	89	TMEM242 (ENSSTOG00000021519)	ARID1B (ENSSTOG00000015979)	ENSSTOG00000031965	NOX3 (ENSSTOG00000000798)	CLDN20 (ENSSTOG00000000795)	TFB1M (ENSSTOG00000026264)	TIAM2 (ENSSTOG00000000784)	SCAF8 (ENSSTOG00000026043)	ENSSTOG00000029860	ENSSTOG00000025472	CNKSR3 (ENSSTOG00000029212) #17	IPCEF1 (ENSSTOG00000000419) #18	OPRM1 (ENSSTOG00000000418) #19	RGS17 (ENSSTOG00000009988) #20	MTRF1L (ENSSTOG00000009980) #21	FBXO5 (ENSSTOG00000029069) #22	VIP (ENSSTOG00000007656) #23	MYCT1 (ENSSTOG00000010644) #24	ENSSTOG00000034176	ENSSTOG00000006796	ENSSTOG00000030302	ESR1 (ENSSTOG00000006748) #26	CCDC170 (ENSSTOG00000013161) #27	ARMT1 (ENSSTOG00000013153) #28	RMND1 (ENSSTOG00000013141) #29	ZBTB2 (ENSSTOG00000021611) #30	AKAP12 (ENSSTOG00000029201) #31	MTHFD1L (ENSSTOG00000010921) #32	PLEKHG1 (ENSSTOG00000010912) #33	IYD (ENSSTOG00000002022) #34	PPP1R14C (ENSSTOG00000002019) #35
Arctic ground squirrel	MODERN SPECIES	219														RGS17 (ENSUPAG00010012932) #20	MTRF1L (ENSUPAG00010012945) #21	FBXO5 (ENSUPAG00010012958) #22	VIP (ENSUPAG00010012967) #23	MYCT1 (ENSUPAG00010012980) #24	SYNE1 (ENSUPAG00010012988)	ESR1 (ENSUPAG00010013233) #26	CCDC170 (ENSUPAG00010013267) #27	ARMT1 (ENSUPAG00010013297) #28	RMND1 (ENSUPAG00010013328) #29	ZBTB2 (ENSUPAG00010013345) #30	AKAP12 (ENSUPAG00010013348) #31	MTHFD1L (ENSUPAG00010013390) #32	PLEKHG1 (ENSUPAG00010013492) #33	IYD (ENSUPAG00010013543) #34	ENSUPAG00010013564 #35
Alpin marmot	MODERN SPECIES	2								SCAF8 (ENSMMMG00000004108)	ENSMMMG00000004079	CNKSR3 (ENSMMMG00000004049) #17	IPCEF1 (ENSMMMG00000003986) #18	OPRM1 (ENSMMMG00000003833) #19	ENSMMMG00000003794	RGS17 (ENSMMMG00000003762) #20	MTRF1L (ENSMMMG00000003749) #21	FBXO5 (ENSMMMG00000003740) #22	VIP (ENSMMMG00000003724) #23	MYCT1 (ENSMMMG00000003699) #24	ENSMMMG00000003653	ENSMMMG00000003589	ENSMMMG00000003544	ENSMMMG00000003497	ESR1 (ENSMMMG00000003430) #26	CCDC170 (ENSMMMG00000003378) #27	ARMT1 (ENSMMMG00000003333) #28	RMND1 (ENSMMMG00000003297) #29	ZBTB2 (ENSMMMG00000003286) #30	AKAP12 (ENSMMMG00000003251) #31	MTHFD1L (ENSMMMG00000003062) #32	PLEKHG1 (ENSMMMG00000003011) #33	IYD (ENSMMMG00000002984) #34
Eurasian red squirrel	MODERN SPECIES	16	ZDHHC14 (ENSSVLG00005018722)	TMEM242 (ENSSVLG00005018773)	ARID1B (ENSSVLG00005018938)	ENSSVLG00005019380	ENSSVLG00005019405	NOX3 (ENSSVLG00005019493)	TFB1M (ENSSVLG00005019605)	CLDN20 (ENSSVLG00005019651)	TIAM2 (ENSSVLG00005019741)	SCAF8 (ENSSVLG00005019879)	CNKSR3 (ENSSVLG00005020289) #17	IPCEF1 (ENSSVLG00005020412) #18	OPRM1 (ENSSVLG00005020650) #19	RGS17 (ENSSVLG00005020849) #20	ENSSVLG00005020917 #21	FBXO5 (ENSSVLG00005021108) #22	ENSSVLG00005021174	VIP (ENSSVLG00005021260) #23	MYCT1 (ENSSVLG00005021349) #24	ENSSVLG00005021418	ENSSVLG00005010938	ENSSVLG00005010970	ENSSVLG00005011101	ESR1 (ENSSVLG00005011518) #26	CCDC170 (ENSSVLG00005011680) #27	ARMT1 (ENSSVLG00005011814) #28	RMND1 (ENSSVLG00005011890) #29	ZBTB2 (ENSSVLG00005011964) #30	AKAP12 (ENSSVLG00005012004) #31	MTHFD1L (ENSSVLG00005012073) #32	PLEKHG1 (ENSSVLG00005012201) #33
Lagomorpha	ANCESTRAL SPECIES	64	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Rabbit	MODERN SPECIES	3	ENSOCUG00000031993	TMEM242 (ENSOCUG00000024736)	ARID1B (ENSOCUG00000008879)	NOX3 (ENSOCUG00000001440)	CLDN20 (ENSOCUG00000012158)	ENSOCUG00000036620	TFB1M (ENSOCUG00000012154)	ENSOCUG00000012137	SCAF8 (ENSOCUG00000026063)	CNKSR3 (ENSOCUG00000009042) #17	ENSOCUG00000037750	IPCEF1 (ENSOCUG00000016038) #18	OPRM1 (ENSOCUG00000016025) #19	RGS17 (ENSOCUG00000021054) #20	ENSOCUG00000000063 #21	FBXO5 (ENSOCUG00000000061) #22	VIP (ENSOCUG00000000513) #23	MYCT1 (ENSOCUG00000017753) #24	ENSOCUG00000038464	SYNE1 (ENSOCUG00000023878)	ESR1 (ENSOCUG00000004829) #26	ENSOCUG00000022327	CCDC170 (ENSOCUG00000013530) #27	ENSOCUG00000036064	ARMT1 (ENSOCUG00000002519) #28	RMND1 (ENSOCUG00000002509) #29	ZBTB2 (ENSOCUG00000022931) #30	AKAP12 (ENSOCUG00000002673) #31	MTHFD1L (ENSOCUG00000002781) #32	PLEKHG1 (ENSOCUG00000016898) #33	IYD (ENSOCUG00000013408) #34
Pika	MODERN SPECIES	10163															RGS17 (ENSOPRG00000003799) #20	FBXO5 (ENSOPRG00000003783) #22
Tree shrew	MODERN SPECIES	425														RGS17 (ENSTBEG00000003623) #20	MTRF1L (ENSTBEG00000003131) #21	FBXO5 (ENSTBEG00000002168) #22
Primates	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT00950000185143
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.f	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##36
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e ##36
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e ##36
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00390000008642	ENSGT00940000155634	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000167556.a	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.a.b.b.a	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT01050000244986.a.b.a.a	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.b.b.a.a.a.a.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Crab-eating macaque	MODERN SPECIES	14	NOX3 (ENSMFAG00000032154)	CLDN20 (ENSMFAG00000024948)	TFB1M (ENSMFAG00000031968)	TIAM2 (ENSMFAG00000000660)	ENSMFAG00000057036	SCAF8 (ENSMFAG00000032738)	ENSMFAG00000055745	CNKSR3 (ENSMFAG00000033880) #17	ENSMFAG00000058345	ENSMFAG00000060374	IPCEF1 (ENSMFAG00000045011) #18	OPRM1 (ENSMFAG00000002542) #19	ENSMFAG00000047203	RGS17 (ENSMFAG00000039353) #20	MTRF1L (ENSMFAG00000039727) #21	FBXO5 (ENSMFAG00000042214) #22	ENSMFAG00000051403	VIP (ENSMFAG00000040930) #23	MYCT1 (ENSMFAG00000055463) #24	ENSMFAG00000063235	ENSMFAG00000057221	ENSMFAG00000057449	SYNE1 (ENSMFAG00000037479)	ESR1 (ENSMFAG00000033966) #26	CCDC170 (ENSMFAG00000034314) #27	ENSMFAG00000035719 #28	RMND1 (ENSMFAG00000034583) #29	ZBTB2 (ENSMFAG00000031487) #30	AKAP12 (ENSMFAG00000039897) #31	ENSMFAG00000063226	ENSMFAG00000063261
Rhesus	MODERN SPECIES	14	ENSMMUG00000020351	ENSMMUG00000065345	NOX3 (ENSMMUG00000008762)	CLDN20 (ENSMMUG00000011172)	TFB1M (ENSMMUG00000011171)	TIAM2 (ENSMMUG00000011169)	ENSMMUG00000053117	SCAF8 (ENSMMUG00000015163)	ENSMMUG00000056312	CNKSR3 (ENSMMUG00000053073) #17	ENSMMUG00000055883	IPCEF1 (ENSMMUG00000009861) #18	OPRM1 (ENSMMUG00000022691) #19	RGS17 (ENSMMUG00000019078) #20	MTRF1L (ENSMMUG00000020178) #21	FBXO5 (ENSMMUG00000019076) #22	ENSMMUG00000058069	VIP (ENSMMUG00000019074) #23	MYCT1 (ENSMMUG00000019073) #24	SYNE1 (ENSMMUG00000019048)	ESR1 (ENSMMUG00000019045) #26	CCDC170 (ENSMMUG00000018346) #27	ARMT1 (ENSMMUG00000060940) #28	RMND1 (ENSMMUG00000018342) #29	ENSMMUG00000050174	ZBTB2 (ENSMMUG00000029475) #30	ENSMMUG00000058018	AKAP12 (ENSMMUG00000023265) #31	MTHFD1L (ENSMMUG00000019774) #32	PLEKHG1 (ENSMMUG00000019772) #33	IYD (ENSMMUG00000010802) #34
Pig-tailed macaque	MODERN SPECIES	152	ENSMNEG00000044073	SAXO1 (ENSMNEG00000033883)	RRAGA (ENSMNEG00000019531)	HAUS6 (ENSMNEG00000034583)	ENSMNEG00000028839	DENND4C (ENSMNEG00000042842)	ENSMNEG00000039493	ACER2 (ENSMNEG00000044407)	ENSMNEG00000032955	ENSMNEG00000035988	ENSMNEG00000018647	ENSMNEG00000045351	SLC24A2 (ENSMNEG00000031804)	RGS17 (ENSMNEG00000039093) #20	ENSMNEG00000030044 #21	FBXO5 (ENSMNEG00000036254) #22	VIP (ENSMNEG00000027106) #23	MYCT1 (ENSMNEG00000044362) #24	SYNE1 (ENSMNEG00000030564)	ESR1 (ENSMNEG00000033178) #26	CCDC170 (ENSMNEG00000021323) #27	ARMT1 (ENSMNEG00000027559) #28	RMND1 (ENSMNEG00000039525) #29	ZBTB2 (ENSMNEG00000043530) #30	AKAP12 (ENSMNEG00000037368) #31	ENSMNEG00000027441	ENSMNEG00000028201	MTHFD1L (ENSMNEG00000039466) #32	PLEKHG1 (ENSMNEG00000027854) #33	IYD (ENSMNEG00000035661) #34	PPP1R14C (ENSMNEG00000029660) #35
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Cercopithecinae_d	ANCESTRAL SPECIES	35	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00950000183030.m.a.a.b.b.b.a.b	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00390000009366.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b.g.a #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00860000135570.b	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Sooty mangabey	MODERN SPECIES	139	ENSCATG00000041391	ENSCATG00000027907	TMEM242 (ENSCATG00000035861)	ARID1B (ENSCATG00000037677)	ENSCATG00000020443	NOX3 (ENSCATG00000020816)	TFB1M (ENSCATG00000009009)	TIAM2 (ENSCATG00000030651)	SCAF8 (ENSCATG00000035361)	ENSCATG00000037387	CNKSR3 (ENSCATG00000030116) #17	IPCEF1 (ENSCATG00000034082) #18	OPRM1 (ENSCATG00000029597) #19	RGS17 (ENSCATG00000040739) #20	ENSCATG00000035276 #21	FBXO5 (ENSCATG00000045339) #22	VIP (ENSCATG00000032792) #23	MYCT1 (ENSCATG00000032119) #24	SYNE1 (ENSCATG00000040903)	ESR1 (ENSCATG00000030182) #26	CCDC170 (ENSCATG00000031654) #27	ARMT1 (ENSCATG00000043831) #28	RMND1 (ENSCATG00000032389) #29	ZBTB2 (ENSCATG00000031949) #30	AKAP12 (ENSCATG00000029672) #31	ENSCATG00000042437	ENSCATG00000041374	MTHFD1L (ENSCATG00000042071) #32	PLEKHG1 (ENSCATG00000037764) #33	IYD (ENSCATG00000043048) #34	PPP1R14C (ENSCATG00000033340) #35
Drill	MODERN SPECIES	1219														RGS17 (ENSMLEG00000012630) #20	ENSMLEG00000034354 #21	FBXO5 (ENSMLEG00000031230) #22	VIP (ENSMLEG00000040460) #23	MYCT1 (ENSMLEG00000024555) #24	SYNE1 (ENSMLEG00000042879)	ESR1 (ENSMLEG00000040148) #26
Olive baboon	MODERN SPECIES	16	NOX3 (ENSPANG00000022192)	ENSPANG00000046477	ENSPANG00000049294	ENSPANG00000017324	ENSPANG00000048153	ENSPANG00000050814	SCAF8 (ENSPANG00000017489)	ENSPANG00000048571	CNKSR3 (ENSPANG00000005834) #17	IPCEF1 (ENSPANG00000023119) #18	ENSPANG00000044645	OPRM1 (ENSPANG00000005833) #19	ENSPANG00000050384	RGS17 (ENSPANG00000022190) #20	MTRF1L (ENSPANG00000033150) #21	FBXO5 (ENSPANG00000046787) #22	VIP (ENSPANG00000004077) #23	MYCT1 (ENSPANG00000026234) #24	SYNE1 (ENSPANG00000024958)	ESR1 (ENSPANG00000020729) #26	ENSPANG00000050683	CCDC170 (ENSPANG00000001110) #27	ARMT1 (ENSPANG00000006927) #28	RMND1 (ENSPANG00000018391) #29	ZBTB2 (ENSPANG00000046901) #30	AKAP12 (ENSPANG00000018393) #31	MTHFD1L (ENSPANG00000024767) #32	PLEKHG1 (ENSPANG00000009444) #33	ENSPANG00000038252	IYD (ENSPANG00000026300) #34	PPP1R14C (ENSPANG00000048658) #35
Vervet Monkey	MODERN SPECIES	4	SYNJ2 (ENSCSAG00000013130)	SNX9 (ENSCSAG00000013174)	ZDHHC14 (ENSCSAG00000013202)	TMEM242 (ENSCSAG00000013217)	ARID1B (ENSCSAG00000013230)	NOX3 (ENSCSAG00000013249)	CLDN20 (ENSCSAG00000018982)	TFB1M (ENSCSAG00000013259)	TIAM2 (ENSCSAG00000013369)	SCAF8 (ENSCSAG00000013430)	CNKSR3 (ENSCSAG00000013444) #17	IPCEF1 (ENSCSAG00000013457) #18	OPRM1 (ENSCSAG00000013480) #19	RGS17 (ENSCSAG00000013490) #20	MTRF1L (ENSCSAG00000013511) #21	FBXO5 (ENSCSAG00000013521) #22	VIP (ENSCSAG00000013530) #23	MYCT1 (ENSCSAG00000013534) #24	ENSCSAG00000018981	SYNE1 (ENSCSAG00000014028)	ESR1 (ENSCSAG00000014236) #26	CCDC170 (ENSCSAG00000014238) #27	ARMT1 (ENSCSAG00000014244) #28	RMND1 (ENSCSAG00000014250) #29	ZBTB2 (ENSCSAG00000014259) #30	AKAP12 (ENSCSAG00000014270) #31	ENSCSAG00000014290	MTHFD1L (ENSCSAG00000014394) #32	PLEKHG1 (ENSCSAG00000014433) #33	IYD (ENSCSAG00000014444) #34	PPP1R14C (ENSCSAG00000014450) #35
Rhinopithecus	ANCESTRAL SPECIES	855														ENSGT00940000155393.d #20	ENSGT00940000155683.l.b #21	ENSGT00530000063692.b #22
Golden snub-nosed monkey	MODERN SPECIES	3259														RGS17 (ENSRROG00000035688) #20	ENSRROG00000027753 #21	FBXO5 (ENSRROG00000026058) #22
Black snub-nosed monkey	MODERN SPECIES	384														RGS17 (ENSRBIG00000035849) #20	ENSRBIG00000016086 #21	FBXO5 (ENSRBIG00000040080) #22
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000163242.f.a	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##36
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##36
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##36
Pan	ANCESTRAL SPECIES	5	ENSGT00940000156483	ENSGT00940000154860.r	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00390000005534.b.b.c.b.a.a.b.a.a.d.b.b	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000154295.y.b.f	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Bonobo	MODERN SPECIES	19	TFB1M (ENSPPAG00000030834)	TIAM2 (ENSPPAG00000043920)	SCAF8 (ENSPPAG00000039826)	GTF2H5 (ENSPPAG00000042615)	SERAC1 (ENSPPAG00000032315)	SYNJ2 (ENSPPAG00000028831)	SNX9 (ENSPPAG00000028633)	ZDHHC14 (ENSPPAG00000026904)	ENSPPAG00000018260	CNKSR3 (ENSPPAG00000040246) #17	ENSPPAG00000038809 #18	OPRM1 (ENSPPAG00000041853) #19	ENSPPAG00000039443	RGS17 (ENSPPAG00000036399) #20	MTRF1L (ENSPPAG00000031251) #21	FBXO5 (ENSPPAG00000017794) #22	VIP (ENSPPAG00000031048) #23	MYCT1 (ENSPPAG00000028230) #24	SYNE1 (ENSPPAG00000027499)	ESR1 (ENSPPAG00000025747) #26	CCDC170 (ENSPPAG00000043973) #27	ARMT1 (ENSPPAG00000030485) #28	RMND1 (ENSPPAG00000034708) #29	ZBTB2 (ENSPPAG00000033109) #30	AKAP12 (ENSPPAG00000027286) #31	ENSPPAG00000029607	MTHFD1L (ENSPPAG00000034031) #32	ENSPPAG00000038707	PLEKHG1 (ENSPPAG00000040411) #33	IYD (ENSPPAG00000035207) #34	ENSPPAG00000038058 #35
Chimpanzee	MODERN SPECIES	19	ZDHHC14 (ENSPTRG00000018736)	ENSPTRG00000048763	TMEM242 (ENSPTRG00000043235)	ARID1B (ENSPTRG00000018733)	NOX3 (ENSPTRG00000018732)	CLDN20 (ENSPTRG00000018731)	TFB1M (ENSPTRG00000018730)	TIAM2 (ENSPTRG00000034266)	SCAF8 (ENSPTRG00000018727)	CNKSR3 (ENSPTRG00000018725) #17	IPCEF1 (ENSPTRG00000018724) #18	OPRM1 (ENSPTRG00000018723) #19	ENSPTRG00000034202	RGS17 (ENSPTRG00000029367) #20	MTRF1L (ENSPTRG00000018722) #21	FBXO5 (ENSPTRG00000018721) #22	VIP (ENSPTRG00000018720) #23	MYCT1 (ENSPTRG00000018719) #24	SYNE1 (ENSPTRG00000018717)	ESR1 (ENSPTRG00000018716) #26	CCDC170 (ENSPTRG00000018715) #27	ARMT1 (ENSPTRG00000018714) #28	RMND1 (ENSPTRG00000018713) #29	ZBTB2 (ENSPTRG00000018712) #30	AKAP12 (ENSPTRG00000018711) #31	ENSPTRG00000051736	ENSPTRG00000049112	ENSPTRG00000018710 #32	ENSPTRG00000044725	PLEKHG1 (ENSPTRG00000018709) #33	IYD (ENSPTRG00000051321) #34
Human	MODERN SPECIES	18	SNX9 (ENSG00000130340)	ZDHHC14 (ENSG00000175048)	TMEM242 (ENSG00000215712)	ARID1B (ENSG00000049618)	NOX3 (ENSG00000074771)	CLDN20 (ENSG00000171217)	TFB1M (ENSG00000029639)	TIAM2 (ENSG00000146426)	SCAF8 (ENSG00000213079)	CNKSR3 (ENSG00000153721) #17	ENSG00000288520	IPCEF1 (ENSG00000074706) #18	OPRM1 (ENSG00000112038) #19	RGS17 (ENSG00000091844) #20	MTRF1L (ENSG00000112031) #21	FBXO5 (ENSG00000112029) #22	VIP (ENSG00000146469) #23	MYCT1 (ENSG00000120279) #24	SYNE1 (ENSG00000131018)	ESR1 (ENSG00000091831) #26	CCDC170 (ENSG00000120262) #27	ARMT1 (ENSG00000146476) #28	RMND1 (ENSG00000155906) #29	ZBTB2 (ENSG00000181472) #30	AKAP12 (ENSG00000131016) #31	MTHFD1L (ENSG00000120254) #32	PLEKHG1 (ENSG00000120278) #33	IYD (ENSG00000009765) #34	PPP1R14C (ENSG00000198729) #35	ULBP3 (ENSG00000131019) ##36	RAET1L (ENSG00000155918) ##36
Gorilla	MODERN SPECIES	19	ZDHHC14 (ENSGGOG00000012728)	ENSGGOG00000024408	ENSGGOG00000027135	ENSGGOG00000002116	ARID1B (ENSGGOG00000011723)	NOX3 (ENSGGOG00000015724)	CLDN20 (ENSGGOG00000000295)	TFB1M (ENSGGOG00000012189)	TIAM2 (ENSGGOG00000012161)	SCAF8 (ENSGGOG00000008645)	CNKSR3 (ENSGGOG00000001228) #17	IPCEF1 (ENSGGOG00000015698) #18	OPRM1 (ENSGGOG00000024312) #19	RGS17 (ENSGGOG00000026033) #20	MTRF1L (ENSGGOG00000022451) #21	FBXO5 (ENSGGOG00000001606) #22	VIP (ENSGGOG00000028135) #23	ENSGGOG00000042786 #24	SYNE1 (ENSGGOG00000014892)	ESR1 (ENSGGOG00000009678) #26	CCDC170 (ENSGGOG00000004497) #27	ARMT1 (ENSGGOG00000023947) #28	RMND1 (ENSGGOG00000007148) #29	ZBTB2 (ENSGGOG00000010529) #30	AKAP12 (ENSGGOG00000024737) #31	MTHFD1L (ENSGGOG00000003642) #32	PLEKHG1 (ENSGGOG00000014887) #33	IYD (ENSGGOG00000036276) #34	ENSGGOG00000026573 #35	ULBP3 (ENSGGOG00000003891) ##36	ENSGGOG00000007925 ##36
Orangutan	MODERN SPECIES	19	ENSPPYG00000035657	SNX9 (ENSPPYG00000017129)	ZDHHC14 (ENSPPYG00000017128)	TMEM242 (ENSPPYG00000017271)	ARID1B (ENSPPYG00000017126)	NOX3 (ENSPPYG00000017125)	CLDN20 (ENSPPYG00000017124)	TFB1M (ENSPPYG00000017123)	TIAM2 (ENSPPYG00000017122)	SCAF8 (ENSPPYG00000017121)	CNKSR3 (ENSPPYG00000017120) #17	IPCEF1 (ENSPPYG00000017119) #18	OPRM1 (ENSPPYG00000029500) #19	RGS17 (ENSPPYG00000017118) #20	MTRF1L (ENSPPYG00000017117) #21	FBXO5 (ENSPPYG00000017116) #22	VIP (ENSPPYG00000017115) #23	MYCT1 (ENSPPYG00000017114) #24	SYNE1 (ENSPPYG00000017113)	ESR1 (ENSPPYG00000017112) #26	CCDC170 (ENSPPYG00000017111) #27	ENSPPYG00000017110	ARMT1 (ENSPPYG00000017109) #28	RMND1 (ENSPPYG00000017108) #29	ZBTB2 (ENSPPYG00000017107) #30	AKAP12 (ENSPPYG00000017106) #31	MTHFD1L (ENSPPYG00000017105) #32	PLEKHG1 (ENSPPYG00000017104) #33	IYD (ENSPPYG00000017103) #34	PPP1R14C (ENSPPYG00000017102) #35	ULBP3 (ENSPPYG00000017268) ##36
Gibbon	MODERN SPECIES	18	ZDHHC14 (ENSNLEG00000034615)	ENSNLEG00000028005	ENSNLEG00000035225	TMEM242 (ENSNLEG00000010676)	ENSNLEG00000015656	NOX3 (ENSNLEG00000015640)	CLDN20 (ENSNLEG00000015639)	TFB1M (ENSNLEG00000034352)	TIAM2 (ENSNLEG00000015541)	SCAF8 (ENSNLEG00000015509)	CNKSR3 (ENSNLEG00000015493) #17	IPCEF1 (ENSNLEG00000015476) #18	OPRM1 (ENSNLEG00000015467) #19	RGS17 (ENSNLEG00000015461) #20	MTRF1L (ENSNLEG00000015450) #21	FBXO5 (ENSNLEG00000015443) #22	VIP (ENSNLEG00000015432) #23	ENSNLEG00000035305 #24	SYNE1 (ENSNLEG00000015419)	ESR1 (ENSNLEG00000015408) #26	CCDC170 (ENSNLEG00000015396) #27	ARMT1 (ENSNLEG00000015395) #28	RMND1 (ENSNLEG00000015387) #29	ZBTB2 (ENSNLEG00000015384) #30	AKAP12 (ENSNLEG00000015379) #31	ENSNLEG00000035803	ENSNLEG00000035383	MTHFD1L (ENSNLEG00000015374) #32	PLEKHG1 (ENSNLEG00000015370) #33	IYD (ENSNLEG00000015363) #34	PPP1R14C (ENSNLEG00000015360) #35
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.f	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.f	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b ##36
Cebidae_a	ANCESTRAL SPECIES	26	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.f	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d.db #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00930000151026.h	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b ##36
Capuchin	MODERN SPECIES	6	SNX9 (ENSCCAG00000019868)	ZDHHC14 (ENSCCAG00000036394)	TMEM242 (ENSCCAG00000032700)	ENSCCAG00000025706	ARID1B (ENSCCAG00000027348)	NOX3 (ENSCCAG00000030330)	TFB1M (ENSCCAG00000015250)	CLDN20 (ENSCCAG00000002679)	TIAM2 (ENSCCAG00000023099)	SCAF8 (ENSCCAG00000024952)	CNKSR3 (ENSCCAG00000022570) #17	IPCEF1 (ENSCCAG00000036029) #18	OPRM1 (ENSCCAG00000025874) #19	RGS17 (ENSCCAG00000030080) #20	MTRF1L (ENSCCAG00000035144) #21	FBXO5 (ENSCCAG00000035526) #22	VIP (ENSCCAG00000034128) #23	MYCT1 (ENSCCAG00000031493) #24	SYNE1 (ENSCCAG00000034147)	ESR1 (ENSCCAG00000030983) #26	ENSCCAG00000023199	ENSCCAG00000036007	CCDC170 (ENSCCAG00000035936) #27	ARMT1 (ENSCCAG00000027013) #28	RMND1 (ENSCCAG00000036014) #29	ZBTB2 (ENSCCAG00000029241) #30	AKAP12 (ENSCCAG00000030534) #31	MTHFD1L (ENSCCAG00000033752) #32	PLEKHG1 (ENSCCAG00000027481) #33	IYD (ENSCCAG00000036983) #34
Bolivian squirrel monkey	MODERN SPECIES	101	ENSSBOG00000028951	ZDHHC14 (ENSSBOG00000025348)	TMEM242 (ENSSBOG00000035724)	ARID1B (ENSSBOG00000026093)	NOX3 (ENSSBOG00000026568)	CLDN20 (ENSSBOG00000018025)	TFB1M (ENSSBOG00000008663)	TIAM2 (ENSSBOG00000035015)	SCAF8 (ENSSBOG00000027023)	ENSSBOG00000030903	CNKSR3 (ENSSBOG00000032255) #17	IPCEF1 (ENSSBOG00000035077) #18	OPRM1 (ENSSBOG00000026674) #19	RGS17 (ENSSBOG00000001068) #20	MTRF1L (ENSSBOG00000024984) #21	FBXO5 (ENSSBOG00000022349) #22	VIP (ENSSBOG00000027960) #23	MYCT1 (ENSSBOG00000027156) #24	SYNE1 (ENSSBOG00000023809)	ENSSBOG00000033348	ENSSBOG00000027653
Marmoset	MODERN SPECIES	16	ARID1B (ENSCJAG00000012474)	ENSCJAG00000077773	NOX3 (ENSCJAG00000012516)	CLDN20 (ENSCJAG00000054130)	TFB1M (ENSCJAG00000012540)	TIAM2 (ENSCJAG00000012559)	SCAF8 (ENSCJAG00000012631)	CNKSR3 (ENSCJAG00000012720) #17	ENSCJAG00000081721	IPCEF1 (ENSCJAG00000012736) #18	OPRM1 (ENSCJAG00000012747) #19	ENSCJAG00000078595	ENSCJAG00000084075	RGS17 (ENSCJAG00000012783) #20	MTRF1L (ENSCJAG00000044179) #21	FBXO5 (ENSCJAG00000012799) #22	VIP (ENSCJAG00000012816) #23	ENSCJAG00000083311	ENSCJAG00000073970	SYNE1 (ENSCJAG00000012842)	ESR1 (ENSCJAG00000013293) #26	CCDC170 (ENSCJAG00000013339) #27	ARMT1 (ENSCJAG00000013343) #28	RMND1 (ENSCJAG00000013350) #29	ZBTB2 (ENSCJAG00000057010) #30	AKAP12 (ENSCJAG00000013402) #31	MTHFD1L (ENSCJAG00000013404) #32	PLEKHG1 (ENSCJAG00000013414) #33	IYD (ENSCJAG00000013438) #34	ENSCJAG00000077421 #35	ENSCJAG00000084847 ##36
Mas night monkey	MODERN SPECIES	265	ENSANAG00000022533	TMEM242 (ENSANAG00000021582)	ARID1B (ENSANAG00000031205)	NOX3 (ENSANAG00000002866)	CLDN20 (ENSANAG00000016075)	TFB1M (ENSANAG00000021469)	TIAM2 (ENSANAG00000025426)	ENSANAG00000014514	SCAF8 (ENSANAG00000036184)	ENSANAG00000029661	CNKSR3 (ENSANAG00000026546) #17	IPCEF1 (ENSANAG00000025255) #18	OPRM1 (ENSANAG00000036165) #19	RGS17 (ENSANAG00000020543) #20	MTRF1L (ENSANAG00000007078) #21	FBXO5 (ENSANAG00000000307) #22	ENSANAG00000026755	VIP (ENSANAG00000033466) #23	MYCT1 (ENSANAG00000028766) #24	SYNE1 (ENSANAG00000028713)	ENSANAG00000032083	ESR1 (ENSANAG00000033920) #26	CCDC170 (ENSANAG00000034546) #27	ARMT1 (ENSANAG00000027746) #28	RMND1 (ENSANAG00000029850) #29	ZBTB2 (ENSANAG00000035402) #30	AKAP12 (ENSANAG00000033578) #31	ENSANAG00000028041	MTHFD1L (ENSANAG00000020601) #32	PLEKHG1 (ENSANAG00000027450) #33	IYD (ENSANAG00000029610) #34
Tarsier	MODERN SPECIES	6778														RGS17 (ENSTSYG00000032179) #20	MTRF1L (ENSTSYG00000003079) #21	FBXO5 (ENSTSYG00000012477) #22
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a ##36
Mouse lemur	MODERN SPECIES	28	SNX9 (ENSMICG00000008656)	ZDHHC14 (ENSMICG00000008645)	TMEM242 (ENSMICG00000031602)	ARID1B (ENSMICG00000008595)	ENSMICG00000036677	NOX3 (ENSMICG00000011586)	TFB1M (ENSMICG00000045849)	TIAM2 (ENSMICG00000011537)	ENSMICG00000035668	SCAF8 (ENSMICG00000028965)	CNKSR3 (ENSMICG00000002819) #17	IPCEF1 (ENSMICG00000044930) #18	OPRM1 (ENSMICG00000030084) #19	RGS17 (ENSMICG00000003816) #20	MTRF1L (ENSMICG00000003811) #21	FBXO5 (ENSMICG00000003809) #22	ENSMICG00000032018	VIP (ENSMICG00000035122) #23	MYCT1 (ENSMICG00000036362) #24	ENSMICG00000042037	SYNE1 (ENSMICG00000007620)	ESR1 (ENSMICG00000007592) #26	CCDC170 (ENSMICG00000029885) #27	ARMT1 (ENSMICG00000047928) #28	RMND1 (ENSMICG00000010583) #29	ZBTB2 (ENSMICG00000027366) #30	AKAP12 (ENSMICG00000034625) #31	MTHFD1L (ENSMICG00000004610) #32	PLEKHG1 (ENSMICG00000004593) #33	IYD (ENSMICG00000004582) #34	ENSMICG00000026491
Lemuriformes_a	ANCESTRAL SPECIES	28	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a ##36
Greater bamboo lemur	MODERN SPECIES	662	SNX9 (ENSPSMG00000021776)	ZDHHC14 (ENSPSMG00000021714)	TMEM242 (ENSPSMG00000021698)	ARID1B (ENSPSMG00000021663)	ENSPSMG00000021609	NOX3 (ENSPSMG00000021601)	CLDN20 (ENSPSMG00000021575)	TFB1M (ENSPSMG00000021571)	TIAM2 (ENSPSMG00000021535)	SCAF8 (ENSPSMG00000021483)	CNKSR3 (ENSPSMG00000021374) #17	OPRM1 (ENSPSMG00000021308) #19	ENSPSMG00000021248	RGS17 (ENSPSMG00000021243) #20	MTRF1L (ENSPSMG00000021227) #21	FBXO5 (ENSPSMG00000021196) #22	VIP (ENSPSMG00000021172) #23	MYCT1 (ENSPSMG00000021158) #24	SYNE1 (ENSPSMG00000021005)	ESR1 (ENSPSMG00000020487) #26	ENSPSMG00000020377	CCDC170 (ENSPSMG00000020376) #27	ARMT1 (ENSPSMG00000020363) #28	RMND1 (ENSPSMG00000020327) #29	ZBTB2 (ENSPSMG00000020305) #30	AKAP12 (ENSPSMG00000020300) #31	MTHFD1L (ENSPSMG00000020197) #32	PLEKHG1 (ENSPSMG00000020047) #33	IYD (ENSPSMG00000020030) #34	PPP1R14C (ENSPSMG00000019988) #35	ENSPSMG00000019973 ##36
Coquerels sifaka	MODERN SPECIES	358	SYNJ2 (ENSPCOG00000026910)	SNX9 (ENSPCOG00000027841)	ZDHHC14 (ENSPCOG00000018191)	TMEM242 (ENSPCOG00000007559)	ARID1B (ENSPCOG00000027362)	NOX3 (ENSPCOG00000016698)	TFB1M (ENSPCOG00000028453)	TIAM2 (ENSPCOG00000018772)	SCAF8 (ENSPCOG00000002067)	CNKSR3 (ENSPCOG00000015375) #17	ENSPCOG00000023906	IPCEF1 (ENSPCOG00000021134) #18	OPRM1 (ENSPCOG00000018832) #19	RGS17 (ENSPCOG00000016664) #20	MTRF1L (ENSPCOG00000008406) #21	FBXO5 (ENSPCOG00000016445) #22	MYCT1 (ENSPCOG00000007366) #24	SYNE1 (ENSPCOG00000022140)	ESR1 (ENSPCOG00000023782) #26	CCDC170 (ENSPCOG00000027420) #27
Bushbaby	MODERN SPECIES	241				TMEM242 (ENSOGAG00000007646)	ENSOGAG00000009749	NOX3 (ENSOGAG00000010573)	TFB1M (ENSOGAG00000011681)	CLDN20 (ENSOGAG00000027759)	TIAM2 (ENSOGAG00000011674)	SCAF8 (ENSOGAG00000034223)	CNKSR3 (ENSOGAG00000011512) #17	IPCEF1 (ENSOGAG00000011510) #18	OPRM1 (ENSOGAG00000011506) #19	RGS17 (ENSOGAG00000006526) #20	MTRF1L (ENSOGAG00000006521) #21	FBXO5 (ENSOGAG00000006519) #22	VIP (ENSOGAG00000006513) #23	MYCT1 (ENSOGAG00000005357) #24	SYNE1 (ENSOGAG00000012587)	ESR1 (ENSOGAG00000012580) #26	CCDC170 (ENSOGAG00000006312) #27	ARMT1 (ENSOGAG00000010684) #28	RMND1 (ENSOGAG00000005263) #29	ZBTB2 (ENSOGAG00000005262) #30	AKAP12 (ENSOGAG00000011277) #31	MTHFD1L (ENSOGAG00000011273) #32	PLEKHG1 (ENSOGAG00000033661) #33	IYD (ENSOGAG00000006759) #34	PPP1R14C (ENSOGAG00000009514) #35	ENSOGAG00000025001 ##36
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Eulipotyphla	ANCESTRAL SPECIES	546														ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Common shrew	MODERN SPECIES	929														RGS17 (ENSSARG00000011103) #20	MTRF1L (ENSSARG00000011089) #21	FBXO5 (ENSSARG00000011060) #22
Hedgehog	MODERN SPECIES	12238																FBXO5 (ENSEEUG00000001811) #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Suina	ANCESTRAL SPECIES	18	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Chacoan peccary	MODERN SPECIES	58	SNX9 (ENSCWAG00000003804)	ZDHHC14 (ENSCWAG00000003840)	TMEM242 (ENSCWAG00000003899)	ARID1B (ENSCWAG00000004015)	NOX3 (ENSCWAG00000004615)	TFB1M (ENSCWAG00000004677)	CLDN20 (ENSCWAG00000004706)	TIAM2 (ENSCWAG00000004753)	ENSCWAG00000005054	SCAF8 (ENSCWAG00000005122)	CNKSR3 (ENSCWAG00000005331) #17	OPRM1 (ENSCWAG00000005403) #19	IPCEF1 (ENSCWAG00000005502) #18	RGS17 (ENSCWAG00000005553) #20	MTRF1L (ENSCWAG00000005591) #21	FBXO5 (ENSCWAG00000005639) #22	VIP (ENSCWAG00000005683) #23	MYCT1 (ENSCWAG00000005709) #24	SYNE1 (ENSCWAG00000005922)	ESR1 (ENSCWAG00000008426) #26	CCDC170 (ENSCWAG00000008566) #27	ARMT1 (ENSCWAG00000008701) #28	RMND1 (ENSCWAG00000008762) #29	ZBTB2 (ENSCWAG00000008811) #30	AKAP12 (ENSCWAG00000008834) #31	MTHFD1L (ENSCWAG00000000009) #32	PLEKHG1 (ENSCWAG00000000019) #33	IYD (ENSCWAG00000000052) #34	PPP1R14C (ENSCWAG00000000064) #35	ENSCWAG00000000084 ##36	ENSCWAG00000000130 ##36
Pig	MODERN SPECIES		ZDHHC14 (ENSSSCG00000035027)	ENSSSCG00000038527	TMEM242 (ENSSSCG00000060508)	ARID1B (ENSSSCG00000004064)	ENSSSCG00000051789	NOX3 (ENSSSCG00000004068)	TFB1M (ENSSSCG00000024361)	CLDN20 (ENSSSCG00000063189)	TIAM2 (ENSSSCG00000004065)	SCAF8 (ENSSSCG00000004070)	CNKSR3 (ENSSSCG00000004071) #17	IPCEF1 (ENSSSCG00000046319) #18	OPRM1 (ENSSSCG00000004074) #19	RGS17 (ENSSSCG00000004075) #20	MTRF1L (ENSSSCG00000004076) #21	FBXO5 (ENSSSCG00000004077) #22	VIP (ENSSSCG00000004078) #23	MYCT1 (ENSSSCG00000031536) #24	ENSSSCG00000004081	ENSSSCG00000049158	ENSSSCG00000004082	ESR1 (ENSSSCG00000025777) #26	ENSSSCG00000046251	CCDC170 (ENSSSCG00000004087) #27	ARMT1 (ENSSSCG00000004088) #28	RMND1 (ENSSSCG00000004089) #29	ZBTB2 (ENSSSCG00000004090) #30	AKAP12 (ENSSSCG00000031733) #31	MTHFD1L (ENSSSCG00000004092) #32	PLEKHG1 (ENSSSCG00000032778) #33	ENSSSCG00000040966
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a ##36	ENSGT00950000185143
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a ##36	ENSGT00950000185143
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT01010000228886	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a ##36
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a.e	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT01010000228886	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00950000185143
Beluga whale	MODERN SPECIES	80	ZDHHC14 (ENSDLEG00000012658)	ENSDLEG00000012649	TMEM242 (ENSDLEG00000012634)	ARID1B (ENSDLEG00000012513)	NOX3 (ENSDLEG00000012479)	CLDN20 (ENSDLEG00000012472)	TFB1M (ENSDLEG00000012467)	TIAM2 (ENSDLEG00000012451)	SCAF8 (ENSDLEG00000012389)	CNKSR3 (ENSDLEG00000012362) #17	IPCEF1 (ENSDLEG00000012349) #18	OPRM1 (ENSDLEG00000012316) #19	ENSDLEG00000012302	RGS17 (ENSDLEG00000012267) #20	MTRF1L (ENSDLEG00000012260) #21	FBXO5 (ENSDLEG00000012221) #22	VIP (ENSDLEG00000012194) #23	MYCT1 (ENSDLEG00000012183) #24	SYNE1 (ENSDLEG00000010092)	ENSDLEG00000009813	ESR1 (ENSDLEG00000009792) #26	CCDC170 (ENSDLEG00000009713) #27	ARMT1 (ENSDLEG00000009691) #28	RMND1 (ENSDLEG00000009657) #29	ZBTB2 (ENSDLEG00000009640) #30	AKAP12 (ENSDLEG00000009611) #31	MTHFD1L (ENSDLEG00000009381) #32	PLEKHG1 (ENSDLEG00000009309) #33	IYD (ENSDLEG00000009156) #34	ENSDLEG00000009118 #35	ENSDLEG00000009098
Narwhal	MODERN SPECIES	301	SNX9 (ENSMMNG00015010588)	ZDHHC14 (ENSMMNG00015010553)	ENSMMNG00015010533	TMEM242 (ENSMMNG00015010509)	ARID1B (ENSMMNG00015010328)	NOX3 (ENSMMNG00015010259)	CLDN20 (ENSMMNG00015010248)	ENSMMNG00015010231	TIAM2 (ENSMMNG00015010117)	SCAF8 (ENSMMNG00015009985)	CNKSR3 (ENSMMNG00015009927) #17	IPCEF1 (ENSMMNG00015009907) #18	OPRM1 (ENSMMNG00015009889) #19	RGS17 (ENSMMNG00015009868) #20	MTRF1L (ENSMMNG00015009848) #21	FBXO5 (ENSMMNG00015009826) #22	VIP (ENSMMNG00015009820) #23	MYCT1 (ENSMMNG00015009810) #24	SYNE1 (ENSMMNG00015009727)	ENSMMNG00015009668	ESR1 (ENSMMNG00015009658) #26	ARMT1 (ENSMMNG00015009647) #28	RMND1 (ENSMMNG00015009633) #29	ZBTB2 (ENSMMNG00015009627) #30	AKAP12 (ENSMMNG00015009623) #31	MTHFD1L (ENSMMNG00015009588) #32	PLEKHG1 (ENSMMNG00015009571) #33	IYD (ENSMMNG00015009560) #34	PPP1R14C (ENSMMNG00015009544) #35	ENSMMNG00015009542	LRP11 (ENSMMNG00015009513) #15
Vaquita	MODERN SPECIES	3	SNX9 (ENSPSNG00000020632)	ZDHHC14 (ENSPSNG00000020697)	TMEM242 (ENSPSNG00000020809)	ENSPSNG00000020849	ARID1B (ENSPSNG00000021058)	NOX3 (ENSPSNG00000021516)	ENSPSNG00000021564	CLDN20 (ENSPSNG00000021584)	TIAM2 (ENSPSNG00000021646)	SCAF8 (ENSPSNG00000021822)	CNKSR3 (ENSPSNG00000021935) #17	IPCEF1 (ENSPSNG00000021988) #18	OPRM1 (ENSPSNG00000022034) #19	RGS17 (ENSPSNG00000022062) #20	MTRF1L (ENSPSNG00000022083) #21	FBXO5 (ENSPSNG00000022107) #22	VIP (ENSPSNG00000022117) #23	MYCT1 (ENSPSNG00000022131) #24	SYNE1 (ENSPSNG00000022337)	ENSPSNG00000022502	ESR1 (ENSPSNG00000022511) #26	ENSPSNG00000022515	ARMT1 (ENSPSNG00000022528) #28	RMND1 (ENSPSNG00000022531) #29	ZBTB2 (ENSPSNG00000022533) #30	AKAP12 (ENSPSNG00000022535) #31	MTHFD1L (ENSPSNG00000022543) #32	PLEKHG1 (ENSPSNG00000022563) #33	IYD (ENSPSNG00000022571) #34	PPP1R14C (ENSPSNG00000022573) #35	ENSPSNG00000009584 ##36
Dolphin	MODERN SPECIES	3444														RGS17 (ENSTTRG00000000403) #20	MTRF1L (ENSTTRG00000000402) #21	FBXO5 (ENSTTRG00000000401) #22
Sperm whale	MODERN SPECIES	1	ENSPCTG00005003781	ENSPCTG00005003788	SNX9 (ENSPCTG00005003806)	ZDHHC14 (ENSPCTG00005003841)	TMEM242 (ENSPCTG00005003855)	ARID1B (ENSPCTG00005003954)	NOX3 (ENSPCTG00005004723)	TFB1M (ENSPCTG00005004760)	CLDN20 (ENSPCTG00005004774)	SCAF8 (ENSPCTG00005004842)	CNKSR3 (ENSPCTG00005005282) #17	IPCEF1 (ENSPCTG00005005351) #18	OPRM1 (ENSPCTG00005005408) #19	RGS17 (ENSPCTG00005005451) #20	MTRF1L (ENSPCTG00005005476) #21	FBXO5 (ENSPCTG00005005511) #22	VIP (ENSPCTG00005005536) #23	MYCT1 (ENSPCTG00005005562) #24	ENSPCTG00005005623	ENSPCTG00005005713	SYNE1 (ENSPCTG00005005794)	ESR1 (ENSPCTG00005005962) #26	ENSPCTG00005006030	CCDC170 (ENSPCTG00005006069) #27	ARMT1 (ENSPCTG00005006118) #28	RMND1 (ENSPCTG00005006136) #29	ZBTB2 (ENSPCTG00005006183) #30	AKAP12 (ENSPCTG00005006212) #31	MTHFD1L (ENSPCTG00005006289) #32	PLEKHG1 (ENSPCTG00005006762) #33	IYD (ENSPCTG00005006834) #34
Blue whale	MODERN SPECIES	3	SNX9 (ENSBMSG00010011766)	ZDHHC14 (ENSBMSG00010011784)	TMEM242 (ENSBMSG00010011795)	ARID1B (ENSBMSG00010011869)	NOX3 (ENSBMSG00010008478)	TFB1M (ENSBMSG00010008513)	CLDN20 (ENSBMSG00010008525)	TIAM2 (ENSBMSG00010008560)	SCAF8 (ENSBMSG00010008649)	ENSBMSG00010008722	CNKSR3 (ENSBMSG00010008753) #17	IPCEF1 (ENSBMSG00010008800) #18	OPRM1 (ENSBMSG00010008836) #19	RGS17 (ENSBMSG00010008878) #20	MTRF1L (ENSBMSG00010008898) #21	FBXO5 (ENSBMSG00010008916) #22	VIP (ENSBMSG00010008935) #23	MYCT1 (ENSBMSG00010008945) #24	ENSBMSG00010009099	ENSBMSG00010009535	ENSBMSG00010009558	ENSBMSG00010009590	ESR1 (ENSBMSG00010009630) #26	CCDC170 (ENSBMSG00010009670) #27	ARMT1 (ENSBMSG00010009705) #28	RMND1 (ENSBMSG00010009721) #29	ZBTB2 (ENSBMSG00010009731) #30	AKAP12 (ENSBMSG00010009739) #31	MTHFD1L (ENSBMSG00010009772) #32	PLEKHG1 (ENSBMSG00010009838) #33	IYD (ENSBMSG00010009876) #34
Pecora	ANCESTRAL SPECIES	19	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT01010000224193	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT01010000224193	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Bovinae	ANCESTRAL SPECIES	35	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34
Bos	ANCESTRAL SPECIES	19	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000174968	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #36
Bos_a	ANCESTRAL SPECIES	54	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000153147.m.a.a.a.a.b	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b.f.a ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #36	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Domestic yak	MODERN SPECIES	1	NOX3 (ENSBGRG00000026724)	TFB1M (ENSBGRG00000026726)	ENSBGRG00000003593	ENSBGRG00000003596	ENSBGRG00000003606	TIAM2 (ENSBGRG00000003631)	ENSBGRG00000003694	SCAF8 (ENSBGRG00000003747)	ENSBGRG00000003933	CNKSR3 (ENSBGRG00000003987) #17	IPCEF1 (ENSBGRG00000004304) #18	OPRM1 (ENSBGRG00000004371) #19	ENSBGRG00000004442	RGS17 (ENSBGRG00000004454) #20	MTRF1L (ENSBGRG00000004480) #21	FBXO5 (ENSBGRG00000004593) #22	VIP (ENSBGRG00000004685) #23	MYCT1 (ENSBGRG00000004741) #24	ENSBGRG00000004829	ENSBGRG00000005643	ENSBGRG00000005659	ENSBGRG00000005717	ENSBGRG00000005788	ESR1 (ENSBGRG00000006011) #26	CCDC170 (ENSBGRG00000006106) #27	ARMT1 (ENSBGRG00000006221) #28	RMND1 (ENSBGRG00000006257) #29	ZBTB2 (ENSBGRG00000006306) #30	AKAP12 (ENSBGRG00000006364) #31	MTHFD1L (ENSBGRG00000006438) #32	PLEKHG1 (ENSBGRG00000006883) #33
Wild yak	MODERN SPECIES	414			NOX3 (ENSBMUG00000023948)	CLDN20 (ENSBMUG00000023939)	TFB1M (ENSBMUG00000023932)	TIAM2 (ENSBMUG00000023891)	ENSBMUG00000023830	SCAF8 (ENSBMUG00000023827)	ENSBMUG00000023809	CNKSR3 (ENSBMUG00000023803) #17	IPCEF1 (ENSBMUG00000023775) #18	OPRM1 (ENSBMUG00000023738) #19	ENSBMUG00000023702	RGS17 (ENSBMUG00000023688) #20	MTRF1L (ENSBMUG00000023676) #21	FBXO5 (ENSBMUG00000023656) #22	VIP (ENSBMUG00000023648) #23	MYCT1 (ENSBMUG00000023638) #24	SYNE1 (ENSBMUG00000023407)	ENSBMUG00000022966 #26	CCDC170 (ENSBMUG00000022950) #27	ARMT1 (ENSBMUG00000022940) #28	RMND1 (ENSBMUG00000022921) #29	ZBTB2 (ENSBMUG00000022889) #30	AKAP12 (ENSBMUG00000022883) #31	MTHFD1L (ENSBMUG00000022849) #32	PLEKHG1 (ENSBMUG00000022740) #33	ENSBMUG00000022703 #36
Bos_b	ANCESTRAL SPECIES	42	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00740000117156.b.e.a	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.ac.a	ENSGT00940000165162	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.e.a ##36
Cow	MODERN SPECIES	28	ENSBTAG00000045772	ARID1B (ENSBTAG00000002728)	NOX3 (ENSBTAG00000013551)	CLDN20 (ENSBTAG00000046726)	TFB1M (ENSBTAG00000031895)	TIAM2 (ENSBTAG00000010047)	ENSBTAG00000048691	SCAF8 (ENSBTAG00000031917)	ENSBTAG00000049872	ENSBTAG00000020723	CNKSR3 (ENSBTAG00000012674) #17	IPCEF1 (ENSBTAG00000003489) #18	OPRM1 (ENSBTAG00000019719) #19	RGS17 (ENSBTAG00000009277) #20	MTRF1L (ENSBTAG00000009275) #21	FBXO5 (ENSBTAG00000021193) #22	VIP (ENSBTAG00000013400) #23	MYCT1 (ENSBTAG00000043975) #24	ENSBTAG00000054597	ENSBTAG00000052173	ENSBTAG00000054309	ENSBTAG00000052949	SYNE1 (ENSBTAG00000009362)	ESR1 (ENSBTAG00000007159) #26	CCDC170 (ENSBTAG00000004099) #27	ENSBTAG00000006398	ARMT1 (ENSBTAG00000004098) #28	RMND1 (ENSBTAG00000013224) #29	ZBTB2 (ENSBTAG00000014790) #30	AKAP12 (ENSBTAG00000014788) #31	MTHFD1L (ENSBTAG00000009846) #32
Hybrid Bos Indicus	MODERN SPECIES	28	TMEM242 (ENSBIXG00005017618)	ENSBIXG00005017632	ARID1B (ENSBIXG00005018627)	NOX3 (ENSBIXG00005018801)	CLDN20 (ENSBIXG00005018824)	TFB1M (ENSBIXG00005005435)	TIAM2 (ENSBIXG00005018908)	ENSBIXG00005000047	SCAF8 (ENSBIXG00005005736)	ENSBIXG00005019017	ENSBIXG00005019032	CNKSR3 (ENSBIXG00005019050) #17	IPCEF1 (ENSBIXG00005019118) #18	OPRM1 (ENSBIXG00005019182) #19	MTRF1L (ENSBIXG00005005667) #21	FBXO5 (ENSBIXG00005019333) #22	VIP (ENSBIXG00005019364) #23	MYCT1 (ENSBIXG00005019369) #24	SYNE1 (ENSBIXG00005007834)	ESR1 (ENSBIXG00005020485) #26	ENSBIXG00005020541	CCDC170 (ENSBIXG00005003477) #27	ARMT1 (ENSBIXG00005020618) #28	RMND1 (ENSBIXG00005020664) #29	ZBTB2 (ENSBIXG00005020697) #30	AKAP12 (ENSBIXG00005020718) #31	MTHFD1L (ENSBIXG00005020926) #32	PLEKHG1 (ENSBIXG00005021022) #33	ENSBIXG00005003560 #36	IYD (ENSBIXG00005021090) #34	PPP1R14C (ENSBIXG00005021119) #35
American bison	MODERN SPECIES	3071	ENSBBBG00000002188	ARID1B (ENSBBBG00000011875)	ENSBBBG00000011886	NOX3 (ENSBBBG00000011894)	CLDN20 (ENSBBBG00000011901)	TFB1M (ENSBBBG00000011905)	TIAM2 (ENSBBBG00000002224)	ENSBBBG00000001962	SCAF8 (ENSBBBG00000002232)	ENSBBBG00000011959	CNKSR3 (ENSBBBG00000011968) #17	IPCEF1 (ENSBBBG00000011980) #18	OPRM1 (ENSBBBG00000012004) #19	RGS17 (ENSBBBG00000002257) #20	MTRF1L (ENSBBBG00000012041) #21	FBXO5 (ENSBBBG00000012046) #22	VIP (ENSBBBG00000012054) #23	MYCT1 (ENSBBBG00000012062) #24	SYNE1 (ENSBBBG00000012707)	ENSBBBG00000008109 #26	CCDC170 (ENSBBBG00000012772) #27	ARMT1 (ENSBBBG00000012777) #28	RMND1 (ENSBBBG00000012797) #29	ZBTB2 (ENSBBBG00000012799) #30	AKAP12 (ENSBBBG00000008737) #31	MTHFD1L (ENSBBBG00000002508) #32	PLEKHG1 (ENSBBBG00000001747) #33	IYD (ENSBBBG00000012867) #34	ENSBBBG00000012881 ##36	ENSBBBG00000012884 ##36	ENSBBBG00000012889 #36
Caprinae	ANCESTRAL SPECIES		ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT01010000224193	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00940000161394.m.a	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a ##36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.d ##36
Goat	MODERN SPECIES	28	NOX3 (ENSCHIG00000014008)	CLDN20 (ENSCHIG00000004190)	TFB1M (ENSCHIG00000017013)	TIAM2 (ENSCHIG00000016626)	ENSCHIG00000026922	SCAF8 (ENSCHIG00000025041)	ENSCHIG00000009557	ENSCHIG00000024852	CNKSR3 (ENSCHIG00000003272) #17	IPCEF1 (ENSCHIG00000004099) #18	OPRM1 (ENSCHIG00000017379) #19	ENSCHIG00000012665	ENSCHIG00000006774	RGS17 (ENSCHIG00000018427) #20	MTRF1L (ENSCHIG00000007830) #21	FBXO5 (ENSCHIG00000026682) #22	ENSCHIG00000018470	VIP (ENSCHIG00000015334) #23	MYCT1 (ENSCHIG00000027092) #24	SYNE1 (ENSCHIG00000016453)	ENSCHIG00000017428	ENSCHIG00000022719	ESR1 (ENSCHIG00000014058) #26	CCDC170 (ENSCHIG00000015746) #27	ARMT1 (ENSCHIG00000024403) #28	RMND1 (ENSCHIG00000013571) #29	ZBTB2 (ENSCHIG00000023404) #30	AKAP12 (ENSCHIG00000013493) #31	MTHFD1L (ENSCHIG00000026337) #32	PLEKHG1 (ENSCHIG00000011933) #33	IYD (ENSCHIG00000026899) #34
Rambouillet Sheep	MODERN SPECIES	24	NOX3 (ENSOARG00020003085)	CLDN20 (ENSOARG00020025258)	TFB1M (ENSOARG00020025200)	TIAM2 (ENSOARG00020025148)	ENSOARG00020025142	SCAF8 (ENSOARG00020025109)	ENSOARG00020025094	ENSOARG00020025060	ENSOARG00020025048	CNKSR3 (ENSOARG00020025010) #17	IPCEF1 (ENSOARG00020024992) #18	OPRM1 (ENSOARG00020024943) #19	ENSOARG00020024931	RGS17 (ENSOARG00020024922) #20	MTRF1L (ENSOARG00020024904) #21	FBXO5 (ENSOARG00020024869) #22	VIP (ENSOARG00020024851) #23	MYCT1 (ENSOARG00020024842) #24	SYNE1 (ENSOARG00020022335)	ESR1 (ENSOARG00020022045) #26	CCDC170 (ENSOARG00020021972) #27	ARMT1 (ENSOARG00020021948) #28	RMND1 (ENSOARG00020021897) #29	ZBTB2 (ENSOARG00020021872) #30	AKAP12 (ENSOARG00020021809) #31	MTHFD1L (ENSOARG00020021229) #32	PLEKHG1 (ENSOARG00020021072) #33	IYD (ENSOARG00020021015) #34	PPP1R14C (ENSOARG00020020977) #35	ENSOARG00020020931 ##36	ENSOARG00020020885 ##36
Siberian musk deer	MODERN SPECIES	60										SCAF8 (ENSMMSG00000000189)	CNKSR3 (ENSMMSG00000000117) #17	IPCEF1 (ENSMMSG00000005110) #18	OPRM1 (ENSMMSG00000004891) #19	RGS17 (ENSMMSG00000004836) #20	MTRF1L (ENSMMSG00000004788) #21	FBXO5 (ENSMMSG00000004752) #22	VIP (ENSMMSG00000004730) #23	MYCT1 (ENSMMSG00000004698) #24	SYNE1 (ENSMMSG00000004396)	ESR1 (ENSMMSG00000004298) #26	ENSMMSG00000004280	CCDC170 (ENSMMSG00000004253) #27	ARMT1 (ENSMMSG00000004226) #28	RMND1 (ENSMMSG00000004210) #29	ZBTB2 (ENSMMSG00000004198) #30	AKAP12 (ENSMMSG00000004153) #31	MTHFD1L (ENSMMSG00000004101) #32	ENSMMSG00000004073	PLEKHG1 (ENSMMSG00000004000) #33	IYD (ENSMMSG00000003954) #34	PPP1R14C (ENSMMSG00000003908) #35
Yarkand deer	MODERN SPECIES	18	ARID1B (ENSCHYG00000014258)	ENSCHYG00000014034	ENSCHYG00000013993	NOX3 (ENSCHYG00000026919)	CLDN20 (ENSCHYG00000026915)	TFB1M (ENSCHYG00000026906)	TIAM2 (ENSCHYG00000026882)	ENSCHYG00000026877	SCAF8 (ENSCHYG00000026866)	CNKSR3 (ENSCHYG00000026849) #17	IPCEF1 (ENSCHYG00000026833) #18	OPRM1 (ENSCHYG00000026823) #19	ENSCHYG00000026812	RGS17 (ENSCHYG00000026801) #20	ENSCHYG00000026781 #21	FBXO5 (ENSCHYG00000026768) #22	VIP (ENSCHYG00000026757) #23	MYCT1 (ENSCHYG00000026747) #24	SYNE1 (ENSCHYG00000025778)	ESR1 (ENSCHYG00000025561) #26	CCDC170 (ENSCHYG00000025505) #27	ARMT1 (ENSCHYG00000025462) #28	RMND1 (ENSCHYG00000025421) #29	ZBTB2 (ENSCHYG00000025392) #30	AKAP12 (ENSCHYG00000025364) #31	MTHFD1L (ENSCHYG00000024773) #32	ENSCHYG00000024716	PLEKHG1 (ENSCHYG00000024587) #33	IYD (ENSCHYG00000024472) #34	PPP1R14C (ENSCHYG00000024443) #35	ENSCHYG00000024426
Camelidae	ANCESTRAL SPECIES	37	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Arabian camel	MODERN SPECIES	34	SYNJ2 (ENSCDRG00005016839)	SNX9 (ENSCDRG00005017884)	ZDHHC14 (ENSCDRG00005018018)	TMEM242 (ENSCDRG00005018146)	ARID1B (ENSCDRG00005018236)	NOX3 (ENSCDRG00005018725)	TFB1M (ENSCDRG00005018794)	CLDN20 (ENSCDRG00005018827)	TIAM2 (ENSCDRG00005018842)	SCAF8 (ENSCDRG00005018900)	CNKSR3 (ENSCDRG00005019125) #17	IPCEF1 (ENSCDRG00005019172) #18	OPRM1 (ENSCDRG00005019256) #19	RGS17 (ENSCDRG00005019286) #20	MTRF1L (ENSCDRG00005019302) #21	FBXO5 (ENSCDRG00005019337) #22	VIP (ENSCDRG00005019356) #23	MYCT1 (ENSCDRG00005019378) #24	SYNE1 (ENSCDRG00005019486)	ENSCDRG00005020770 #26	ENSCDRG00005020779 #26	CCDC170 (ENSCDRG00005020784) #27	ARMT1 (ENSCDRG00005020788) #28	RMND1 (ENSCDRG00005020798) #29	ZBTB2 (ENSCDRG00005020809) #30	AKAP12 (ENSCDRG00005020815) #31	MTHFD1L (ENSCDRG00005020831) #32	PLEKHG1 (ENSCDRG00005020866) #33	IYD (ENSCDRG00005020897) #34	PPP1R14C (ENSCDRG00005020905) #35	ENSCDRG00005020920 ##36
Alpaca	MODERN SPECIES	3127												IPCEF1 (ENSVPAG00000001194) #18	OPRM1 (ENSVPAG00000001193) #19	RGS17 (ENSVPAG00000001192) #20	MTRF1L (ENSVPAG00000001191) #21	FBXO5 (ENSVPAG00000001190) #22	VIP (ENSVPAG00000001189) #23	MYCT1 (ENSVPAG00000001188) #24	SYNE1 (ENSVPAG00000001186)	ESR1 (ENSVPAG00000001185) #26
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Ursidae	ANCESTRAL SPECIES	22	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642.e	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT00940000161275 #15
Ursus	ANCESTRAL SPECIES	81	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642.e	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Polar bear	MODERN SPECIES	150	TMEM242 (ENSUMAG00000012861)	LDHAL6B (ENSUMAG00000012868)	ARID1B (ENSUMAG00000012934)	NOX3 (ENSUMAG00000013373)	TFB1M (ENSUMAG00000013377)	ENSUMAG00000013378	CLDN20 (ENSUMAG00000013386)	ENSUMAG00000013389	SCAF8 (ENSUMAG00000013404)	ENSUMAG00000013414	CNKSR3 (ENSUMAG00000013420) #17	IPCEF1 (ENSUMAG00000013444) #18	OPRM1 (ENSUMAG00000013465) #19	RGS17 (ENSUMAG00000013506) #20	MTRF1L (ENSUMAG00000013507) #21	FBXO5 (ENSUMAG00000013509) #22
American black bear	MODERN SPECIES	6484														RGS17 (ENSUAMG00000008218) #20	MTRF1L (ENSUAMG00000008221) #21	FBXO5 (ENSUAMG00000008224) #22
Giant Panda	MODERN SPECIES	1	SNX9 (ENSAMEG00000009626)	ZDHHC14 (ENSAMEG00000009680)	ENSAMEG00000009699	ARID1B (ENSAMEG00000009707)	ENSAMEG00000024497	ENSAMEG00000012782	CLDN20 (ENSAMEG00000019340)	TFB1M (ENSAMEG00000012761)	TIAM2 (ENSAMEG00000012741)	SCAF8 (ENSAMEG00000007583)	CNKSR3 (ENSAMEG00000007564) #17	IPCEF1 (ENSAMEG00000010361) #18	OPRM1 (ENSAMEG00000010364) #19	RGS17 (ENSAMEG00000001249) #20	MTRF1L (ENSAMEG00000001252) #21	FBXO5 (ENSAMEG00000030250) #22	VIP (ENSAMEG00000010871) #23	MYCT1 (ENSAMEG00000025534) #24	SYNE1 (ENSAMEG00000010887)	ESR1 (ENSAMEG00000011072) #26	CCDC170 (ENSAMEG00000011074) #27	ARMT1 (ENSAMEG00000024514) #28	RMND1 (ENSAMEG00000011087) #29	ZBTB2 (ENSAMEG00000023899) #30	AKAP12 (ENSAMEG00000011101) #31	MTHFD1L (ENSAMEG00000003323) #32	ENSAMEG00000027298	PLEKHG1 (ENSAMEG00000003289) #33	ENSAMEG00000003274 #34	ENSAMEG00000027911 #35	ENSAMEG00000018260 ##36
Mustelinae	ANCESTRAL SPECIES	26	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.b ##36	ENSGT01030000235909
American mink	MODERN SPECIES	4	SNX9 (ENSNVIG00000009085)	ZDHHC14 (ENSNVIG00000009059)	TM242 (ENSNVIG00000009036)	ARID1B (ENSNVIG00000008689)	ENSNVIG00000008662	NOX3 (ENSNVIG00000008632)	CLD20 (ENSNVIG00000008611)	TFB1M (ENSNVIG00000008600)	ENSNVIG00000008569	SCAF8 (ENSNVIG00000008452)	CNKSR3 (ENSNVIG00000008386) #17	IPCEF1 (ENSNVIG00000008312) #18	OPRM1 (ENSNVIG00000008214) #19	RGS17 (ENSNVIG00000008185) #20	MTRF1L (ENSNVIG00000008138) #21	FBXO5 (ENSNVIG00000008114) #22	VIP (ENSNVIG00000008088) #23	MYCT1 (ENSNVIG00000008075) #24	SYNE1 (ENSNVIG00000007105)	ESR1 (ENSNVIG00000006962) #26	CCDC170 (ENSNVIG00000006940) #27	ARMT1 (ENSNVIG00000006911) #28	RMND1 (ENSNVIG00000006864) #29	ZBTB2 (ENSNVIG00000006849) #30	AKAP12 (ENSNVIG00000006843) #31	MTHFD1L (ENSNVIG00000006768) #32	PLEKHG1 (ENSNVIG00000006728) #33	ENSNVIG00000006714	IYD1 (ENSNVIG00000006683) #34	PPP1R14C (ENSNVIG00000006672) #35	ENSNVIG00000006654 ##36
Ferret	MODERN SPECIES	201														RGS17 (ENSMPUG00000010584) #20	MTRF1L (ENSMPUG00000010577) #21	FBXO5 (ENSMPUG00000010553) #22	VIP (ENSMPUG00000010545) #23	MYCT1 (ENSMPUG00000010542) #24	SYNE1 (ENSMPUG00000010485)	ESR1 (ENSMPUG00000010481) #26	CCDC170 (ENSMPUG00000010462) #27	ARMT1 (ENSMPUG00000010459) #28	RMND1 (ENSMPUG00000010450) #29	ZBTB2 (ENSMPUG00000010444) #30	AKAP12 (ENSMPUG00000010439) #31	ENSMPUG00000010433	ENSMPUG00000010428	MTHFD1L (ENSMPUG00000010414) #32	ENSMPUG00000010410	PLEKHG1 (ENSMPUG00000010404) #33	IYD (ENSMPUG00000010397) #34
Canidae	ANCESTRAL SPECIES	34	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Dingo	MODERN SPECIES	125	NOX3 (ENSCAFG00020015230)	CLDN20 (ENSCAFG00020015226)	TFB1M (ENSCAFG00020015224)	TIAM2 (ENSCAFG00020015145)	SCAF8 (ENSCAFG00020015048)	ENSCAFG00020015039	ENSCAFG00020015021	CNKSR3 (ENSCAFG00020015015) #17	IPCEF1 (ENSCAFG00020014995) #18	OPRM1 (ENSCAFG00020014975) #19	ENSCAFG00020014964	ENSCAFG00020014963	ENSCAFG00020014955	RGS17 (ENSCAFG00020014939) #20	MTRF1L (ENSCAFG00020014937) #21	FBXO5 (ENSCAFG00020014935) #22	VIP (ENSCAFG00020014925) #23	MYCT1 (ENSCAFG00020014923) #24	ENSCAFG00020014881	ENSCAFG00020014804	ESR1 (ENSCAFG00020014707) #26	CCDC170 (ENSCAFG00020014704) #27	ENSCAFG00020014702 #28	ENSCAFG00020014700 #28	RMND1 (ENSCAFG00020014697) #29	ZBTB2 (ENSCAFG00020014696) #30	AKAP12 (ENSCAFG00020014695) #31	ENSCAFG00020014694	ENSCAFG00020014133 #32	ENSCAFG00020014068 #32	PLEKHG1 (ENSCAFG00020014055) #33
Dog	MODERN SPECIES		ENSCAFG00845000840	ZDHHC14 (ENSCAFG00845000812)	ENSCAFG00845000800	TMEM242 (ENSCAFG00845000782)	ARID1B (ENSCAFG00845000636)	NOX3 (ENSCAFG00845000506)	CLDN20 (ENSCAFG00845000485)	TFB1M (ENSCAFG00845000478)	TIAM2 (ENSCAFG00845000411)	SCAF8 (ENSCAFG00845000294)	ENSCAFG00845000268	CNKSR3 (ENSCAFG00845000205) #17	OPRM1 (ENSCAFG00845000160) #19	RGS17 (ENSCAFG00845000141) #20	MTRF1L (ENSCAFG00845000120) #21	FBXO5 (ENSCAFG00845000104) #22	ENSCAFG00845000096	VIP (ENSCAFG00845000085) #23	MYCT1 (ENSCAFG00845000077) #24	ENSCAFG00845000071	SYNE1 (ENSCAFG00845000043)	ESR1 (ENSCAFG00845000028) #26	CCDC170 (ENSCAFG00845000020) #27	ARMT1 (ENSCAFG00845000014) #28	RMND1 (ENSCAFG00845000007) #29	ZBTB2 (ENSCAFG00845021289) #30	AKAP12 (ENSCAFG00845021174) #31	MTHFD1L (ENSCAFG00845020116) #32	PLEKHG1 (ENSCAFG00845019814) #33	IYD (ENSCAFG00845019736) #34	PPP1R14C (ENSCAFG00845019656) #35
Red fox	MODERN SPECIES	26											SCAF8 (ENSVVUG00000007532)	CNKSR3 (ENSVVUG00000007515) #17	IPCEF1 (ENSVVUG00000007491) #18	OPRM1 (ENSVVUG00000007466) #19	RGS17 (ENSVVUG00000007424) #20	FBXO5 (ENSVVUG00000007414) #22	ENSVVUG00000007408	VIP (ENSVVUG00000007395) #23	MYCT1 (ENSVVUG00000007392) #24	ENSVVUG00000006984	ENSVVUG00000006396	ESR1 (ENSVVUG00000006190) #26	CCDC170 (ENSVVUG00000006168) #27	ARMT1 (ENSVVUG00000006134) #28	RMND1 (ENSVVUG00000006114) #29	ZBTB2 (ENSVVUG00000006110) #30	ENSVVUG00000006108	AKAP12 (ENSVVUG00000006099) #31	ENSVVUG00000005367 #32	ENSVVUG00000005287 #32	PLEKHG1 (ENSVVUG00000005233) #33
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01040000242984	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00390000005732.j	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012.i	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01040000242984	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00390000005732.j	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012.i	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT01040000242984	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
leopard	MODERN SPECIES	140														RGS17 (ENSPPRG00000011102) #20	MTRF1L (ENSPPRG00000011039) #21	FBXO5 (ENSPPRG00000011003) #22	VIP (ENSPPRG00000010990) #23	MYCT1 (ENSPPRG00000010948) #24	ENSPPRG00000010874	ENSPPRG00000009951	ESR1 (ENSPPRG00000009745) #26	CCDC170 (ENSPPRG00000009606) #27	ARMT1 (ENSPPRG00000009551) #28	RMND1 (ENSPPRG00000009267) #29	ZBTB2 (ENSPPRG00000009222) #30	AKAP12 (ENSPPRG00000009132) #31	MTHFD1L (ENSPPRG00000009075) #32	PLEKHG1 (ENSPPRG00000008781) #33	IYD (ENSPPRG00000008491) #34	PPP1R14C (ENSPPRG00000008482) #35	ENSPPRG00000008471
Tiger	MODERN SPECIES	551	SNX9 (ENSPTIG00000016966)	ZDHHC14 (ENSPTIG00000014488)	TMEM242 (ENSPTIG00000013511)	ARID1B (ENSPTIG00000009353)	ENSPTIG00000007298	NOX3 (ENSPTIG00000006575)	CLDN20 (ENSPTIG00000007262)	TFB1M (ENSPTIG00000003540)	ENSPTIG00000018691	SCAF8 (ENSPTIG00000014836)	CNKSR3 (ENSPTIG00000012267) #17	IPCEF1 (ENSPTIG00000009006) #18	OPRM1 (ENSPTIG00000006702) #19	RGS17 (ENSPTIG00000004990) #20	MTRF1L (ENSPTIG00000020019) #21	FBXO5 (ENSPTIG00000019781) #22	VIP (ENSPTIG00000019361) #23	MYCT1 (ENSPTIG00000019093) #24	ENSPTIG00000003459	ENSPTIG00000017428	ENSPTIG00000017043	ENSPTIG00000006582 #26	CCDC170 (ENSPTIG00000015972) #27	ARMT1 (ENSPTIG00000015245) #28	RMND1 (ENSPTIG00000012455) #29	ZBTB2 (ENSPTIG00000012254) #30	AKAP12 (ENSPTIG00000011299) #31	MTHFD1L (ENSPTIG00000008995) #32
Cat	MODERN SPECIES	236	SNX9 (ENSFCAG00000010853)	ZDHHC14 (ENSFCAG00000006280)	TMEM242 (ENSFCAG00000036867)	ARID1B (ENSFCAG00000006278)	NOX3 (ENSFCAG00000006165)	CLDN20 (ENSFCAG00000001805)	TFB1M (ENSFCAG00000038785)	TIAM2 (ENSFCAG00000006164)	SCAF8 (ENSFCAG00000023424)	ENSFCAG00000051585	CNKSR3 (ENSFCAG00000005430) #17	IPCEF1 (ENSFCAG00000024018) #18	OPRM1 (ENSFCAG00000005359) #19	RGS17 (ENSFCAG00000037833) #20	MTRF1L (ENSFCAG00000037854) #21	FBXO5 (ENSFCAG00000030126) #22	VIP (ENSFCAG00000002179) #23	MYCT1 (ENSFCAG00000028294) #24	SYNE1 (ENSFCAG00000000049)	ESR1 (ENSFCAG00000031492) #26	CCDC170 (ENSFCAG00000010207) #27	ARMT1 (ENSFCAG00000010206) #28	RMND1 (ENSFCAG00000010205) #29	ZBTB2 (ENSFCAG00000040972) #30	AKAP12 (ENSFCAG00000041794) #31	MTHFD1L (ENSFCAG00000003673) #32	PLEKHG1 (ENSFCAG00000029811) #33	ENSFCAG00000052538	IYD (ENSFCAG00000003732) #34	ENSFCAG00000023771	PPP1R14C (ENSFCAG00000035894) #35
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36	ENSGT01100000263517.b.d.m.a.a.a.a.c #36
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.c #36	ENSGT01100000263517.b.d.m.a.a.a.a.d.b ##36
Greater horseshoe bat	MODERN SPECIES	21	ZDHHC14 (ENSRFEG00010019985)	ENSRFEG00010019950	ENSRFEG00010019919	ARID1B (ENSRFEG00010019697)	NOX3 (ENSRFEG00010019587)	CLDN20 (ENSRFEG00010019574)	TFB1M (ENSRFEG00010019543)	TIAM2 (ENSRFEG00010019501)	SCAF8 (ENSRFEG00010018868)	CNKSR3 (ENSRFEG00010018738) #17	ENSRFEG00010018693	IPCEF1 (ENSRFEG00010018675) #18	OPRM1 (ENSRFEG00010018574) #19	RGS17 (ENSRFEG00010018529) #20	MTRF1L (ENSRFEG00010018467) #21	FBXO5 (ENSRFEG00010018406) #22	ENSRFEG00010018397	ENSRFEG00010018375	VIP (ENSRFEG00010018363) #23	MYCT1 (ENSRFEG00010018323) #24	SYNE1 (ENSRFEG00010017835)	ESR1 (ENSRFEG00010017671) #26	CCDC170 (ENSRFEG00010017486) #27	ARMT1 (ENSRFEG00010017409) #28	RMND1 (ENSRFEG00010017312) #29	ZBTB2 (ENSRFEG00010017257) #30	AKAP12 (ENSRFEG00010017239) #31	ENSRFEG00010017181	MTHFD1L (ENSRFEG00010016718) #32	PLEKHG1 (ENSRFEG00010016656) #33	ENSRFEG00010016588
Microbat	MODERN SPECIES	1062	SNX9 (ENSMLUG00000013344)	ENSMLUG00000022376	ENSMLUG00000024961	ZDHHC14 (ENSMLUG00000013339)	TMEM242 (ENSMLUG00000024744)	ARID1B (ENSMLUG00000011428)	NOX3 (ENSMLUG00000002990)	CLDN20 (ENSMLUG00000011344)	TFB1M (ENSMLUG00000011329)	TIAM2 (ENSMLUG00000011283)	SCAF8 (ENSMLUG00000029190)	CNKSR3 (ENSMLUG00000009567) #17	IPCEF1 (ENSMLUG00000010851) #18	OPRM1 (ENSMLUG00000010826) #19	RGS17 (ENSMLUG00000027630) #20	FBXO5 (ENSMLUG00000008413) #22	VIP (ENSMLUG00000014238) #23	MYCT1 (ENSMLUG00000014235) #24	ENSMLUG00000014185
Megabat	MODERN SPECIES	8528																FBXO5 (ENSPVAG00000012511) #22
Equus	ANCESTRAL SPECIES	46	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000163242.b.b	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT01090000263352	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.bc	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.bb.a.a ##36
Donkey	MODERN SPECIES	20	ZDHHC14 (ENSEASG00005038210)	ENSEASG00005032861	TMEM242 (ENSEASG00005018892)	ARID1B (ENSEASG00005018891)	NOX3 (ENSEASG00005018889)	CLDN20 (ENSEASG00005018888)	TFB1M (ENSEASG00005018887)	ENSEASG00005031064	TIAM2 (ENSEASG00005018884)	SCAF8 (ENSEASG00005018879)	CNKSR3 (ENSEASG00005018876) #17	IPCEF1 (ENSEASG00005018872) #18	OPRM1 (ENSEASG00005018870) #19	RGS17 (ENSEASG00005018868) #20	MTRF1L (ENSEASG00005018866) #21	FBXO5 (ENSEASG00005018864) #22	VIP (ENSEASG00005018861) #23	ENSEASG00005037232	MYCT1 (ENSEASG00005031624) #24	ENSEASG00005018835	ENSEASG00005018807	ESR1 (ENSEASG00005018755) #26	CCDC170 (ENSEASG00005018748) #27	ARMT1 (ENSEASG00005031339) #28	RMND1 (ENSEASG00005018744) #29	ZBTB2 (ENSEASG00005018742) #30	AKAP12 (ENSEASG00005018740) #31	MTHFD1L (ENSEASG00005017019) #32	ENSEASG00005016807 #33	ENSEASG00005016792 #34	ENSEASG00005023024
Horse	MODERN SPECIES	24	ZDHHC14 (ENSECAG00000018229)	TMEM242 (ENSECAG00000016335)	ENSECAG00000056473	ARID1B (ENSECAG00000000518)	NOX3 (ENSECAG00000020844)	TFB1M (ENSECAG00000020997)	CLDN20 (ENSECAG00000005339)	TIAM2 (ENSECAG00000023722)	ENSECAG00000044412	SCAF8 (ENSECAG00000005540)	CNKSR3 (ENSECAG00000019241) #17	IPCEF1 (ENSECAG00000003511) #18	OPRM1 (ENSECAG00000013458) #19	RGS17 (ENSECAG00000022231) #20	MTRF1L (ENSECAG00000002759) #21	FBXO5 (ENSECAG00000011630) #22	VIP (ENSECAG00000013586) #23	ENSECAG00000059138	MYCT1 (ENSECAG00000015960) #24	ENSECAG00000057509	SYNE1 (ENSECAG00000017353)	ESR1 (ENSECAG00000022441) #26	CCDC170 (ENSECAG00000013130) #27	ARMT1 (ENSECAG00000015349) #28	RMND1 (ENSECAG00000018207) #29	ZBTB2 (ENSECAG00000021762) #30	AKAP12 (ENSECAG00000022166) #31	MTHFD1L (ENSECAG00000001166) #32	PLEKHG1 (ENSECAG00000007095) #33	IYD (ENSECAG00000018766) #34	ENSECAG00000034476 #35
Atlantogenata	ANCESTRAL SPECIES	51					ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.b #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d ##36	ENSGT00940000161275 #15
Xenarthra	ANCESTRAL SPECIES	1316														ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22
Sloth	MODERN SPECIES	1155														RGS17 (ENSCHOG00000006892) #20	MTRF1L (ENSCHOG00000006884) #21	FBXO5 (ENSCHOG00000006877) #22
Armadillo	MODERN SPECIES	4516													ENSDNOG00000034948	RGS17 (ENSDNOG00000035766) #20	ENSDNOG00000049717 #21	FBXO5 (ENSDNOG00000001231) #22
Afrotheria	ANCESTRAL SPECIES	55						ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.a.a ##28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d ##36	ENSGT00940000161275 #15
Afrotheria_a	ANCESTRAL SPECIES	51						ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.a.a ##28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT01100000263517.b.d.m.a.a.a.a.d ##36	ENSGT00940000161275 #15
Elephant	MODERN SPECIES	1					ARID1B (ENSLAFG00000012011)	NOX3 (ENSLAFG00000013520)	TFB1M (ENSLAFG00000014035)	TIAM2 (ENSLAFG00000014023)	SCAF8 (ENSLAFG00000000022)	CNKSR3 (ENSLAFG00000006519) #17	IPCEF1 (ENSLAFG00000002600) #18	ENSLAFG00000031150	OPRM1 (ENSLAFG00000002597) #19	RGS17 (ENSLAFG00000004025) #20	MTRF1L (ENSLAFG00000004022) #21	FBXO5 (ENSLAFG00000001713) #22	VIP (ENSLAFG00000006337) #23	MYCT1 (ENSLAFG00000017921) #24	SYNE1 (ENSLAFG00000008554)	ENSLAFG00000015250 #26	CCDC170 (ENSLAFG00000012458) #27	ARMT1 (ENSLAFG00000007338) ##28	RMND1 (ENSLAFG00000017983) #29	ZBTB2 (ENSLAFG00000001805) #30	AKAP12 (ENSLAFG00000006275) #31	MTHFD1L (ENSLAFG00000001635) #32	PLEKHG1 (ENSLAFG00000002415) #33	IYD (ENSLAFG00000004806) #34	PPP1R14C (ENSLAFG00000015503) #35	ENSLAFG00000023055 ##36	LRP11 (ENSLAFG00000022229) #15
Tenrec	MODERN SPECIES	16765																FBXO5 (ENSETEG00000005657) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Opossum	MODERN SPECIES	1	ARID1B (ENSMODG00000008068)	ENSMODG00000046689	NOX3 (ENSMODG00000008142)	CLDN20 (ENSMODG00000023278)	TFB1M (ENSMODG00000042364)	ENSMODG00000011574	TIAM2 (ENSMODG00000008254)	ENSMODG00000040441	SCAF8 (ENSMODG00000008301)	CNKSR3 (ENSMODG00000008343) #17	ENSMODG00000008368	OPRM1 (ENSMODG00000008382) #19	ENSMODG00000042566	RGS17 (ENSMODG00000008463) #20	MTRF1L (ENSMODG00000008487) #21	FBXO5 (ENSMODG00000008501) #22	VIP (ENSMODG00000008511) #23	MYCT1 (ENSMODG00000008518) #24	SYNE1 (ENSMODG00000016253)	ESR1 (ENSMODG00000016719) #26	CCDC170 (ENSMODG00000016728) #27	ARMT1 (ENSMODG00000028240) #28	RMND1 (ENSMODG00000016750) #29	ZBTB2 (ENSMODG00000040530) #30	ENSMODG00000046586 #31	MTHFD1L (ENSMODG00000016765) #32	ENSMODG00000016771 #33	ENSMODG00000041763 #33	IYD (ENSMODG00000016781) #34	ENSMODG00000016787 #35	LRP11 (ENSMODG00000016792) #15
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.c #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Diprotodontia_a	ANCESTRAL SPECIES	43	ENSGT00940000179662	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428.a #17	ENSGT00940000154428.b #18	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00960000188774	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023.c #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1190	ENSVURG00010017551	ENSVURG00010017546	ENSVURG00010017505	ENSVURG00010017476	ENSVURG00010017467	ENSVURG00010017460	ENSVURG00010017454	ENSVURG00010017399	ENSVURG00010017329	ENSVURG00010017300 #17	ENSVURG00010017288 #18	ENSVURG00010017278 #19	ENSVURG00010017270 #19	ENSVURG00010017239 #20	ENSVURG00010017229 #21	ENSVURG00010017222 #22	ENSVURG00010017215	ENSVURG00010017208	ENSVURG00010017199 #24
Common wonbat	MODERN SPECIES	1190	ENSVURG00010018765	ENSVURG00010018758	ENSVURG00010018747	ENSVURG00010018695	ENSVURG00010018684	ENSVURG00010018676	ENSVURG00010018671	ENSVURG00010018668	ENSVURG00010018599	ENSVURG00010018545	ENSVURG00010018529 #17	ENSVURG00010018517 #18	ENSVURG00010018440 #19	ENSVURG00010018398 #20	ENSVURG00010018380 #21	ENSVURG00010018374 #22	ENSVURG00010018366	ENSVURG00010018363	ENSVURG00010018358 #24	ENSVURG00010018354	ENSVURG00010018341	ENSVURG00010018331	ENSVURG00010018324	ENSVURG00010018319	ENSVURG00010018316	ENSVURG00010018308	ENSVURG00010018305	ENSVURG00010018293	ENSVURG00010018264	ENSVURG00010018243	ENSVURG00010018231
koala	MODERN SPECIES	25	SNX9 (ENSPCIG00000010173)	ENSPCIG00000010170	ZDHHC14 (ENSPCIG00000010169)	TMEM242 (ENSPCIG00000010168)	ARID1B (ENSPCIG00000014269)	NOX3 (ENSPCIG00000000686)	CLDN20 (ENSPCIG00000001027)	TFB1M (ENSPCIG00000001010)	TIAM2 (ENSPCIG00000001091)	SCAF8 (ENSPCIG00000001141)	CNKSR3 (ENSPCIG00000001171) #17	IPCEF1 (ENSPCIG00000001189) #18	OPRM1 (ENSPCIG00000001232) #19	RGS17 (ENSPCIG00000024049) #20	MTRF1L (ENSPCIG00000008136) #21	FBXO5 (ENSPCIG00000027501) #22	ENSPCIG00000008468	ENSPCIG00000026717	MYCT1 (ENSPCIG00000026720) #24	ENSPCIG00000026821	ENSPCIG00000037024	ENSPCIG00000035321	ENSPCIG00000026913	ENSPCIG00000015401 #26	CCDC170 (ENSPCIG00000015420) #27	ARMT1 (ENSPCIG00000015424) #28	RMND1 (ENSPCIG00000015430) #29	ZBTB2 (ENSPCIG00000000317) #30	ENSPCIG00000000275 #31	MTHFD1L (ENSPCIG00000000340) #32	ENSPCIG00000036024 #33
Wallaby	MODERN SPECIES	2073															MTRF1L (ENSMEUG00000007378) #21	FBXO5 (ENSMEUG00000007369) #22
Tasmanian devil	MODERN SPECIES	3	ZDHHC14 (ENSSHAG00000018630)	ENSSHAG00000025144	ARID1B (ENSSHAG00000017851)	ENSSHAG00000021568	ENSSHAG00000030648	NOX3 (ENSSHAG00000014151)	TFB1M (ENSSHAG00000013259)	CLDN20 (ENSSHAG00000022719)	TIAM2 (ENSSHAG00000012539)	SCAF8 (ENSSHAG00000009915)	CNKSR3 (ENSSHAG00000007010) #17	IPCEF1 (ENSSHAG00000025279) #18	OPRM1 (ENSSHAG00000005181) #19	RGS17 (ENSSHAG00000020953) #20	MTRF1L (ENSSHAG00000017997) #21	FBXO5 (ENSSHAG00000017971) #22	ENSSHAG00000031731	MYCT1 (ENSSHAG00000028412) #24	SYNE1 (ENSSHAG00000016595)	ESR1 (ENSSHAG00000015240) #26	CCDC170 (ENSSHAG00000013818) #27	ENSSHAG00000013619	ARMT1 (ENSSHAG00000026323) #28	ZBTB2 (ENSSHAG00000013043) #30	RMND1 (ENSSHAG00000020900) #29	ENSSHAG00000012930 #31	MTHFD1L (ENSSHAG00000010362) #32	PLEKHG1 (ENSSHAG00000009584) #33	IYD (ENSSHAG00000005031) #34	PPP1R14C (ENSSHAG00000017832) #35	LRP11 (ENSSHAG00000027360) #15
Platypus	MODERN SPECIES	11	TMEM242 (ENSOANG00000039791)	NOX3 (ENSOANG00000022080)	ENSOANG00000045786	CLDN20 (ENSOANG00000048314)	TFB1M (ENSOANG00000048035)	TIAM2 (ENSOANG00000006708)	SCAF8 (ENSOANG00000014230)	CNKSR3 (ENSOANG00000014617) #17	ENSOANG00000014618	ENSOANG00000047481	ENSOANG00000041492	ENSOANG00000014619 #19	ENSOANG00000038578 #19	RGS17 (ENSOANG00000042607) #20	MTRF1L (ENSOANG00000037135) #21	FBXO5 (ENSOANG00000005309) #22	VIP (ENSOANG00000003593) #23	MYCT1 (ENSOANG00000042329) #24	ENSOANG00000046889	ENSOANG00000047227	ENSOANG00000041148	ENSOANG00000011163	QKI (ENSOANG00000011161)	SOD2 (ENSOANG00000000632)	WTAP (ENSOANG00000038325)	ACAT2 (ENSOANG00000048813)	ENSOANG00000038861	PNLDC1 (ENSOANG00000012199)	TCP1 (ENSOANG00000012198)	MAS1 (ENSOANG00000012996)	IGF2R (ENSOANG00000007296)
Sauria	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428 #17	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Episquamata	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Elapidae	ANCESTRAL SPECIES		ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.vc	ENSGT00940000165162.a	ENSGT00940000174968	ENSGT00940000154481.a.b.uc	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D.e	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b.vc	ENSGT00940000165162.a	ENSGT00940000174968	ENSGT00940000154481.a.b.uc	ENSGT00940000158133.l #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31
Eastern brown snake	MODERN SPECIES	26	SNX9 (ENSPTXG00000013387)	ZDHHC14 (ENSPTXG00000013386)	TMEM242 (ENSPTXG00000013385)	ARID1B (ENSPTXG00000013384)	NOX3 (ENSPTXG00000013382)	CLDN20 (ENSPTXG00000013381)	TFB1M (ENSPTXG00000013379)	TIAM2 (ENSPTXG00000013375)	SCAF8 (ENSPTXG00000013371)	ENSPTXG00000013369	ENSPTXG00000013368	OPRM1 (ENSPTXG00000013366) #19	ENSPTXG00000013364	RGS17 (ENSPTXG00000013362) #20	MTRF1L (ENSPTXG00000013360) #21	FBXO5 (ENSPTXG00000013358) #22	VIP (ENSPTXG00000013357) #23	MYCT1 (ENSPTXG00000013355) #24	SYNE1 (ENSPTXG00000012015)	ESR1 (ENSPTXG00000011984) #26	CCDC170 (ENSPTXG00000011981) #27	ARMT1 (ENSPTXG00000011979) #28	RMND1 (ENSPTXG00000011977) #29	ZBTB2 (ENSPTXG00000011976) #30	AKAP12 (ENSPTXG00000011975) #31
Mainland tiger snake	MODERN SPECIES	130							NOX3 (ENSNSUG00000011886)	CLDN20 (ENSNSUG00000011885)	TFB1M (ENSNSUG00000011876)	TIAM2 (ENSNSUG00000011875)	SCAF8 (ENSNSUG00000011721)	ENSNSUG00000011640	OPRM1 (ENSNSUG00000011638) #19	RGS17 (ENSNSUG00000011636) #20	MTRF1L (ENSNSUG00000011635) #21	FBXO5 (ENSNSUG00000011634) #22	VIP (ENSNSUG00000011614) #23	MYCT1 (ENSNSUG00000011612) #24	ENSNSUG00000011594	ENSNSUG00000011593	ENSNSUG00000011592	ENSNSUG00000011591	ENSNSUG00000011587	ESR1 (ENSNSUG00000011583) #26	ARMT1 (ENSNSUG00000011562) #28	ENSNSUG00000011560	ENSNSUG00000011558 #29	ZBTB2 (ENSNSUG00000011556) #30	ENSNSUG00000011555 #31
Blue-lipped sea krait	MODERN SPECIES	140															MTRF1L (ENSLLTG00000002283) #21	FBXO5 (ENSLLTG00000002288) #22
Indian cobra	MODERN SPECIES		TMEM242 (ENSNNAG00000000057)	ENSNNAG00000000060	ENSNNAG00000000062	NOX3 (ENSNNAG00000000065)	TFB1M (ENSNNAG00000000070)	CLDN20 (ENSNNAG00000000073)	TIAM2 (ENSNNAG00000000085)	SCAF8 (ENSNNAG00000000099)	ENSNNAG00000000107	ENSNNAG00000000113	OPRM1 (ENSNNAG00000000115) #19	ENSNNAG00000000118	ENSNNAG00000000120	RGS17 (ENSNNAG00000000122) #20	MTRF1L (ENSNNAG00000000123) #21	FBXO5 (ENSNNAG00000000132) #22	VIP (ENSNNAG00000000134) #23	MYCT1 (ENSNNAG00000000136) #24	ENSNNAG00000000142	ESR1 (ENSNNAG00000000145) #26	CCDC170 (ENSNNAG00000000148) #27	ARMT1 (ENSNNAG00000000149) #28	RMND1 (ENSNNAG00000000151) #29	ZBTB2 (ENSNNAG00000000152) #30	ENSNNAG00000000153 #31	MTHFD1L (ENSNNAG00000000154) #32	PLEKHG1 (ENSNNAG00000000156) #33	IYD (ENSNNAG00000000160) #34	PPP1R14C (ENSNNAG00000000163) #35	LRP11 (ENSNNAG00000000167) #15	PCMT1 (ENSNNAG00000000170) #14
Lizard	MODERN SPECIES		ENSACAG00000034908	NOX3 (ENSACAG00000005196)	TFB1M (ENSACAG00000045406)	CLDN20 (ENSACAG00000005273)	TIAM2 (ENSACAG00000005274)	SCAF8 (ENSACAG00000005282)	ENSACAG00000005456	ENSACAG00000039263	ENSACAG00000041930	OPRM1 (ENSACAG00000005494) #19	ENSACAG00000039724	ENSACAG00000042018	ENSACAG00000045432	RGS17 (ENSACAG00000005532) #20	MTRF1L (ENSACAG00000005557) #21	FBXO5 (ENSACAG00000005635) #22	VIP (ENSACAG00000005619) #23	MYCT1 (ENSACAG00000005641) #24	ENSACAG00000043733	PLD5 (ENSACAG00000003356)	map1lc3c (ENSACAG00000043121)	EXO1 (ENSACAG00000003422)	WDR64 (ENSACAG00000003432)	OPN3 (ENSACAG00000003462)	ENSACAG00000041950	ENSACAG00000039600	ENSACAG00000043183	ENSACAG00000044583	ENSACAG00000003466	RGS7 (ENSACAG00000003468)	ENSACAG00000028807
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133.j #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Common wall lizard	MODERN SPECIES	11	ZDHHC14 (ENSPMRG00000011013)	ENSPMRG00000011010	ENSPMRG00000011008	TMEM242 (ENSPMRG00000010935)	ARID1B (ENSPMRG00000010882)	NOX3 (ENSPMRG00000010851)	CLDN20 (ENSPMRG00000010841)	TFB1M (ENSPMRG00000010835)	TIAM2 (ENSPMRG00000010821)	SCAF8 (ENSPMRG00000010796)	ENSPMRG00000010784	ENSPMRG00000010775	OPRM1 (ENSPMRG00000010770) #19	RGS17 (ENSPMRG00000010763) #20	MTRF1L (ENSPMRG00000010758) #21	FBXO5 (ENSPMRG00000010755) #22	VIP (ENSPMRG00000010751) #23	MYCT1 (ENSPMRG00000010748) #24	ENSPMRG00000010603	ENSPMRG00000010559	ENSPMRG00000010555	ENSPMRG00000010543	ENSPMRG00000010538 #26	CCDC170 (ENSPMRG00000010531) #27	ENSPMRG00000010528 #28	ENSPMRG00000010523 #28	ENSPMRG00000010520 #28	RMND1 (ENSPMRG00000010516) #29	ZBTB2 (ENSPMRG00000010513) #30	AKAP12 (ENSPMRG00000010510) #31	MTHFD1L (ENSPMRG00000010497) #32
Argentine black and white tegu	MODERN SPECIES	2	ZDHHC14 (ENSSMRG00000022245)	TMEM242 (ENSSMRG00000022247)	ARID1B (ENSSMRG00000022250)	ENSSMRG00000022459	NOX3 (ENSSMRG00000022461)	TFB1M (ENSSMRG00000022468)	CLDN20 (ENSSMRG00000022469)	TIAM2 (ENSSMRG00000022470)	SCAF8 (ENSSMRG00000022475)	ENSSMRG00000022478	ENSSMRG00000022479	OPRM1 (ENSSMRG00000022480) #19	ENSSMRG00000022481	RGS17 (ENSSMRG00000022485) #20	MTRF1L (ENSSMRG00000022486) #21	FBXO5 (ENSSMRG00000022487) #22	VIP (ENSSMRG00000022488) #23	MYCT1 (ENSSMRG00000022489) #24	ENSSMRG00000022490	ENSSMRG00000022621	ESR1 (ENSSMRG00000022622) #26	CCDC170 (ENSSMRG00000022623) #27	ARMT1 (ENSSMRG00000022624) #28	RMND1 (ENSSMRG00000022625) #29	ZBTB2 (ENSSMRG00000022626) #30	AKAP12 (ENSSMRG00000022627) #31	MTHFD1L (ENSSMRG00000022628) #32	PLEKHG1 (ENSSMRG00000022629) #33	IYD (ENSSMRG00000022630) #34	PPP1R14C (ENSSMRG00000022632) #35	LRP11 (ENSSMRG00000022633) #15
tuatara	MODERN SPECIES	1416													ENSSPUG00000014666	RGS17 (ENSSPUG00000014655) #20	MTRF1L (ENSSPUG00000014563) #21	FBXO5 (ENSSPUG00000014516) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000156557	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Aves	ANCESTRAL SPECIES	12	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Anatidae	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501.a	ENSGT00940000160501.b	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Duck	MODERN SPECIES	21	SNX9 (ENSAPLG00000015762)	ZDHHC14 (ENSAPLG00000015573)	TMEM242 (ENSAPLG00000021932)	ARID1B (ENSAPLG00000007574)	ENSAPLG00000029287	NOX3 (ENSAPLG00000006709)	CLDN20 (ENSAPLG00000000733)	TFB1M (ENSAPLG00000006328)	TIAM2 (ENSAPLG00000005802)	SCAF8 (ENSAPLG00000005765)	ENSAPLG00000006234	ENSAPLG00000015652	ENSAPLG00000024843	RGS17 (ENSAPLG00000007077) #20	MTRF1L (ENSAPLG00000007043) #21	FBXO5 (ENSAPLG00000006998) #22	VIP (ENSAPLG00000006708) #23	MYCT1 (ENSAPLG00000020316) #24	ENSAPLG00000006495	ENSAPLG00000029426	ENSAPLG00000017874	ENSAPLG00000020483	ENSAPLG00000027425	ENSAPLG00000019803	ENSAPLG00000017771	ESR1 (ENSAPLG00000004585) #26	CCDC170 (ENSAPLG00000011938) #27	ARMT1 (ENSAPLG00000011927) #28	RMND1 (ENSAPLG00000011834) #29	ZBTB2 (ENSAPLG00000011819) #30	AKAP12 (ENSAPLG00000020224) #31
Pink-footed goose	MODERN SPECIES	2	ZDHHC14 (ENSABRG00000004532)	TMEM242 (ENSABRG00000004553)	ARID1B (ENSABRG00000004619)	ENSABRG00000004777	ENSABRG00000004798	TFB1M (ENSABRG00000004813)	CLDN20 (ENSABRG00000004825)	TIAM2 (ENSABRG00000004837)	SCAF8 (ENSABRG00000004887)	ENSABRG00000004920	ENSABRG00000004935	ENSABRG00000004958	OPRM1 (ENSABRG00000004981) #19	RGS17 (ENSABRG00000005008) #20	MTRF1L (ENSABRG00000005018) #21	FBXO5 (ENSABRG00000005041) #22	VIP (ENSABRG00000005071) #23	MYCT1 (ENSABRG00000005084) #24	SYNE1 (ENSABRG00000005369)	ESR1 (ENSABRG00000008623) #26	CCDC170 (ENSABRG00000008853) #27	ARMT1 (ENSABRG00000008870) #28	RMND1 (ENSABRG00000008884) #29	ZBTB2 (ENSABRG00000008902) #30	AKAP12 (ENSABRG00000008911) #31	MTHFD1L (ENSABRG00000008938) #32	PLEKHG1 (ENSABRG00000008984) #33	IYD (ENSABRG00000009070) #34	PPP1R14C (ENSABRG00000009084) #35	LRP11 (ENSABRG00000009107) #15	PCMT1 (ENSABRG00000009117) #14
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723.y #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723.y #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Chicken	MODERN SPECIES	22	SNX9 (ENSGALG00010006157)	ZDHHC14 (ENSGALG00010006081)	TMEM242 (ENSGALG00010006070)	ARID1B (ENSGALG00010004101)	NOX3 (ENSGALG00010005345)	CLDN20 (ENSGALG00010005328)	TFB1M (ENSGALG00010005322)	TIAM2 (ENSGALG00010005307)	SCAF8 (ENSGALG00010005305)	ENSGALG00010005288	IPCEF1 (ENSGALG00010005277)	OPRM1 (ENSGALG00010005256) #19	ENSGALG00010006635	RGS17 (ENSGALG00010006411) #20	MTRF1L (ENSGALG00010005251) #21	FBXO5 (ENSGALG00010005244) #22	VIP (ENSGALG00010005240) #23	MYCT1 (ENSGALG00010005226) #24	ENSGALG00010007201	ENSGALG00010005224	ENSGALG00010007190	ENSGALG00010005216	ENSGALG00010005213	ENSGALG00010005203	ESR1 (ENSGALG00010005186) #26	CCDC170 (ENSGALG00010005141) #27	ARMT1 (ENSGALG00010005779) #28	RMND1 (ENSGALG00010005752) #29	ZBTB2 (ENSGALG00010005716) #30	AKAP12 (ENSGALG00010005704) #31	MTHFD1L (ENSGALG00010005610) #32
Japanese quail	MODERN SPECIES	21	SERAC1 (ENSCJPG00005008277)	SYNJ2 (ENSCJPG00005007912)	SNX9 (ENSCJPG00005007904)	ZDHHC14 (ENSCJPG00005007862)	TMEM242 (ENSCJPG00005007847)	ARID1B (ENSCJPG00005007834)	NOX3 (ENSCJPG00005007803)	TFB1M (ENSCJPG00005007800)	TIAM2 (ENSCJPG00005007794)	SCAF8 (ENSCJPG00005007787)	ENSCJPG00005007764	ENSCJPG00005007757	OPRM1 (ENSCJPG00005007753) #19	RGS17 (ENSCJPG00005007740) #20	MTRF1L (ENSCJPG00005007734) #21	FBXO5 (ENSCJPG00005007733) #22	VIP (ENSCJPG00005007731) #23	MYCT1 (ENSCJPG00005007730) #24	ENSCJPG00005007605	ENSCJPG00005007549	ESR1 (ENSCJPG00005007531) #26	CCDC170 (ENSCJPG00005007525) #27	RMND1 (ENSCJPG00005007512) #29	ZBTB2 (ENSCJPG00005007510) #30	AKAP12 (ENSCJPG00005007509) #31	MTHFD1L (ENSCJPG00005006446) #32	PLEKHG1 (ENSCJPG00005006423) #33	IYD (ENSCJPG00005006409) #34	PPP1R14C (ENSCJPG00005006377) #35	LRP11 (ENSCJPG00005006308) #15	PCMT1 (ENSCJPG00005006305) #14
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
Golden eagle	MODERN SPECIES	24	SYNJ2 (ENSACCG00020008525)	SNX9 (ENSACCG00020008421)	ZDHHC14 (ENSACCG00020008401)	TMEM242 (ENSACCG00020008388)	ARID1B (ENSACCG00020008028)	NOX3 (ENSACCG00020007609)	CLDN20 (ENSACCG00020007593)	TFB1M (ENSACCG00020007584)	TIAM2 (ENSACCG00020007567)	SCAF8 (ENSACCG00020007542)	ENSACCG00020007527	ENSACCG00020007507	OPRM1 (ENSACCG00020007494) #19	RGS17 (ENSACCG00020007480) #20	MTRF1L (ENSACCG00020007439) #21	FBXO5 (ENSACCG00020007364) #22	VIP (ENSACCG00020007352) #23	MYCT1 (ENSACCG00020007328) #24	SYNE1 (ENSACCG00020006416)	ESR1 (ENSACCG00020005342) #26	CCDC170 (ENSACCG00020005320) #27	ARMT1 (ENSACCG00020005308) #28	RMND1 (ENSACCG00020005297) #29	ZBTB2 (ENSACCG00020005841) #30	AKAP12 (ENSACCG00020005819) #31	MTHFD1L (ENSACCG00020005759) #32	PLEKHG1 (ENSACCG00020005704) #33	IYD (ENSACCG00020005672) #34	PPP1R14C (ENSACCG00020005640) #35	LRP11 (ENSACCG00020005620) #15	PCMT1 (ENSACCG00020005602) #14
Kakapo	MODERN SPECIES	2	SNX9 (ENSSHBG00005011583)	ZDHHC14 (ENSSHBG00005011607)	TMEM242 (ENSSHBG00005011626)	ARID1B (ENSSHBG00005011654)	ENSSHBG00005011723	NOX3 (ENSSHBG00005011761)	TFB1M (ENSSHBG00005011837)	CLDN20 (ENSSHBG00005011859)	TIAM2 (ENSSHBG00005011875)	SCAF8 (ENSSHBG00005011942)	ENSSHBG00005012066	ENSSHBG00005012130	OPRM1 (ENSSHBG00005012145) #19	RGS17 (ENSSHBG00005012171) #20	MTRF1L (ENSSHBG00005012193) #21	FBXO5 (ENSSHBG00005012219) #22	VIP (ENSSHBG00005012244) #23	MYCT1 (ENSSHBG00005012266) #24	SYNE1 (ENSSHBG00005013775)	ESR1 (ENSSHBG00005018449) #26	CCDC170 (ENSSHBG00005018463) #27	ARMT1 (ENSSHBG00005018468) #28	RMND1 (ENSSHBG00005018472) #29	ZBTB2 (ENSSHBG00005018476) #30	AKAP12 (ENSSHBG00005018480) #31	MTHFD1L (ENSSHBG00005018498) #32	ENSSHBG00005018545	PLEKHG1 (ENSSHBG00005018548) #33	IYD (ENSSHBG00005018551) #34	PPP1R14C (ENSSHBG00005018557) #35	LRP11 (ENSSHBG00005018560) #15
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Common canary	MODERN SPECIES	31	SNX9 (ENSSCAG00000014101)	ZDHHC14 (ENSSCAG00000014093)	TMEM242 (ENSSCAG00000014088)	ARID1B (ENSSCAG00000013941)	NOX3 (ENSSCAG00000013853)	CLDN20 (ENSSCAG00000013847)	TFB1M (ENSSCAG00000013838)	ENSSCAG00000013832	TIAM2 (ENSSCAG00000013824)	SCAF8 (ENSSCAG00000013808)	ENSSCAG00000013785	ENSSCAG00000013768	OPRM1 (ENSSCAG00000013760) #19	RGS17 (ENSSCAG00000013756) #20	MTRF1L (ENSSCAG00000013752) #21	FBXO5 (ENSSCAG00000013747) #22	VIP (ENSSCAG00000013737) #23	MYCT1 (ENSSCAG00000013731) #24	SYNE1 (ENSSCAG00000012054)	ESR1 (ENSSCAG00000011670) #26	CCDC170 (ENSSCAG00000011646) #27	ARMT1 (ENSSCAG00000011639) #28	ENSSCAG00000011637	RMND1 (ENSSCAG00000011631) #29	ZBTB2 (ENSSCAG00000011626) #30	AKAP12 (ENSSCAG00000011615) #31	MTHFD1L (ENSSCAG00000011453) #32	PLEKHG1 (ENSSCAG00000011409) #33	IYD (ENSSCAG00000011402) #34	PPP1R14C (ENSSCAG00000011401) #35	LRP11 (ENSSCAG00000011398) #15
Medium ground finch	MODERN SPECIES	19	SERAC1 (ENSGFOG00000000900)	SYNJ2 (ENSGFOG00000000925)	SNX9 (ENSGFOG00000000967)	ZDHHC14 (ENSGFOG00000000987)	TMEM242 (ENSGFOG00000001001)	ARID1B (ENSGFOG00000001017)	NOX3 (ENSGFOG00000001065)	TFB1M (ENSGFOG00000001090)	CLDN20 (ENSGFOG00000001099)	TIAM2 (ENSGFOG00000001112)	ENSGFOG00000001172	ENSGFOG00000001195	OPRM1 (ENSGFOG00000001199) #19	RGS17 (ENSGFOG00000001204) #20	MTRF1L (ENSGFOG00000001223) #21	FBXO5 (ENSGFOG00000001261) #22	VIP (ENSGFOG00000001275) #23	MYCT1 (ENSGFOG00000001280) #24	SYNE1 (ENSGFOG00000001502)	ESR1 (ENSGFOG00000004320) #26
Flycatcher	MODERN SPECIES	21	SERAC1 (ENSFALG00000012595)	SYNJ2 (ENSFALG00000012593)	SNX9 (ENSFALG00000012564)	TMEM242 (ENSFALG00000024202)	ARID1B (ENSFALG00000012529)	NOX3 (ENSFALG00000012508)	TFB1M (ENSFALG00000023934)	CLDN20 (ENSFALG00000014941)	TIAM2 (ENSFALG00000012470)	SCAF8 (ENSFALG00000012433)	ENSFALG00000012421	IPCEF1 (ENSFALG00000026673)	OPRM1 (ENSFALG00000012411) #19	RGS17 (ENSFALG00000012407) #20	MTRF1L (ENSFALG00000012403) #21	FBXO5 (ENSFALG00000012397) #22	VIP (ENSFALG00000024261) #23	MYCT1 (ENSFALG00000015346) #24	SYNE1 (ENSFALG00000012360)	ESR1 (ENSFALG00000012305) #26	CCDC170 (ENSFALG00000012277) #27	ARMT1 (ENSFALG00000023321) #28	RMND1 (ENSFALG00000012263) #29	ZBTB2 (ENSFALG00000027296) #30	AKAP12 (ENSFALG00000012244) #31	MTHFD1L (ENSFALG00000012200) #32	PLEKHG1 (ENSFALG00000012185) #33	IYD (ENSFALG00000012182) #34	ENSFALG00000023388	LRP11 (ENSFALG00000023095) #15	PCMT1 (ENSFALG00000026300) #14
Great tit	MODERN SPECIES	22	SYNJ2 (ENSPMJG00000008772)	SNX9 (ENSPMJG00000008774)	ZDHHC14 (ENSPMJG00000008799)	TMEM242 (ENSPMJG00000008800)	ARID1B (ENSPMJG00000008818)	NOX3 (ENSPMJG00000008851)	TFB1M (ENSPMJG00000008934)	CLDN20 (ENSPMJG00000008935)	TIAM2 (ENSPMJG00000008936)	SCAF8 (ENSPMJG00000008939)	ENSPMJG00000008941	ENSPMJG00000008944	OPRM1 (ENSPMJG00000008946) #19	RGS17 (ENSPMJG00000008950) #20	MTRF1L (ENSPMJG00000008953) #21	FBXO5 (ENSPMJG00000008955) #22	VIP (ENSPMJG00000008960) #23	MYCT1 (ENSPMJG00000008961) #24	ENSPMJG00000008965	ENSPMJG00000009003	ESR1 (ENSPMJG00000009054) #26	CCDC170 (ENSPMJG00000009058) #27	ARMT1 (ENSPMJG00000009061) #28	RMND1 (ENSPMJG00000009063) #29	ZBTB2 (ENSPMJG00000009064) #30	AKAP12 (ENSPMJG00000009097) #31	MTHFD1L (ENSPMJG00000009104) #32	PLEKHG1 (ENSPMJG00000009185) #33	IYD (ENSPMJG00000009205) #34	PPP1R14C (ENSPMJG00000009207) #35	LRP11 (ENSPMJG00000009223) #15
African ostrich	MODERN SPECIES	394														RGS17 (ENSSCUG00000005882) #20	MTRF1L (ENSSCUG00000005885) #21	FBXO5 (ENSSCUG00000005886) #22	VIP (ENSSCUG00000005887) #23	MYCT1 (ENSSCUG00000005889) #24	ENSSCUG00000005891	ENSSCUG00000005898	ESR1 (ENSSCUG00000005902) #26	CCDC170 (ENSSCUG00000005904) #27	ENSSCUG00000005906 #28	ENSSCUG00000005907 #28	RMND1 (ENSSCUG00000005908) #29	ZBTB2 (ENSSCUG00000005909) #30	AKAP12 (ENSSCUG00000005911) #31	MTHFD1L (ENSSCUG00000005958) #32	PLEKHG1 (ENSSCUG00000006059) #33
Australian saltwater crocodile	MODERN SPECIES	60	ZDHHC14 (ENSCPRG00005017985)	TMEM242 (ENSCPRG00005017996)	ARID1B (ENSCPRG00005018008)	NOX3 (ENSCPRG00005018044)	ENSCPRG00005018059	TFB1M (ENSCPRG00005018062)	ENSCPRG00005018064	CLDN20 (ENSCPRG00005018068)	TIAM2 (ENSCPRG00005018071)	SCAF8 (ENSCPRG00005018086)	ENSCPRG00005018098	ENSCPRG00005018107	OPRM1 (ENSCPRG00005018110) #19	RGS17 (ENSCPRG00005018111) #20	MTRF1L (ENSCPRG00005018112) #21	FBXO5 (ENSCPRG00005018113) #22	VIP (ENSCPRG00005018118) #23	MYCT1 (ENSCPRG00005018122) #24	ENSCPRG00005018130	ENSCPRG00005018146	ESR1 (ENSCPRG00005018167) #26	CCDC170 (ENSCPRG00005018179) #27	ARMT1 (ENSCPRG00005018186) #28	RMND1 (ENSCPRG00005018189) #29	ZBTB2 (ENSCPRG00005018192) #30	AKAP12 (ENSCPRG00005018202) #31	MTHFD1L (ENSCPRG00005018210) #32	PLEKHG1 (ENSCPRG00005018218) #33	IYD (ENSCPRG00005018228) #34	PPP1R14C (ENSCPRG00005018235) #35	LRP11 (ENSCPRG00005018237) #15
Cryptodira	ANCESTRAL SPECIES	1	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000154428 #17	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000156557	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15
Emydidae	ANCESTRAL SPECIES		ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35	ENSGT00940000161275 #15	ENSGT00950000183032.B.b.b #14
painted turtle	MODERN SPECIES	12	SYNJ2 (ENSCPBG00000016273)	SNX9 (ENSCPBG00000016279)	ZDHHC14 (ENSCPBG00000016281)	TMEM242 (ENSCPBG00000016288)	ARID1B (ENSCPBG00000016297)	NOX3 (ENSCPBG00000016318)	TFB1M (ENSCPBG00000016320)	CLDN20 (ENSCPBG00000016322)	TIAM2 (ENSCPBG00000016323)	SCAF8 (ENSCPBG00000016330)	ENSCPBG00000016337	ENSCPBG00000016339	OPRM1 (ENSCPBG00000016340) #19	RGS17 (ENSCPBG00000016347) #20	MTRF1L (ENSCPBG00000016349) #21	FBXO5 (ENSCPBG00000016351) #22	VIP (ENSCPBG00000016353) #23	MYCT1 (ENSCPBG00000016354) #24	ENSCPBG00000016384	ENSCPBG00000016476	ESR1 (ENSCPBG00000016495) #26	CCDC170 (ENSCPBG00000016507) #27	ARMT1 (ENSCPBG00000016517) #28	RMND1 (ENSCPBG00000016524) #29	ZBTB2 (ENSCPBG00000016532) #30	AKAP12 (ENSCPBG00000016538) #31	MTHFD1L (ENSCPBG00000016546) #32	PLEKHG1 (ENSCPBG00000016555) #33	IYD (ENSCPBG00000016570) #34	PPP1R14C (ENSCPBG00000016573) #35	LRP11 (ENSCPBG00000016581) #15
Three-toed box turtle	MODERN SPECIES	31	ZDHHC14 (ENSTMTG00000001723)	TMEM242 (ENSTMTG00000001730)	ARID1B (ENSTMTG00000001751)	NOX3 (ENSTMTG00000001834)	TFB1M (ENSTMTG00000001850)	CLDN20 (ENSTMTG00000001859)	TIAM2 (ENSTMTG00000001863)	SCAF8 (ENSTMTG00000001928)	ENSTMTG00000002146	ENSTMTG00000002153	ENSTMTG00000002165	ENSTMTG00000002172 #19	ENSTMTG00000002179 #19	RGS17 (ENSTMTG00000002186) #20	MTRF1L (ENSTMTG00000002218) #21	FBXO5 (ENSTMTG00000002290) #22	VIP (ENSTMTG00000002297) #23	MYCT1 (ENSTMTG00000002308) #24	ENSTMTG00000002319	ENSTMTG00000002339	ENSTMTG00000002347	ENSTMTG00000002405	ESR1 (ENSTMTG00000002657) #26	CCDC170 (ENSTMTG00000002659) #27	ARMT1 (ENSTMTG00000002665) #28	RMND1 (ENSTMTG00000002671) #29	ZBTB2 (ENSTMTG00000002675) #30	AKAP12 (ENSTMTG00000002678) #31	MTHFD1L (ENSTMTG00000002772) #32	ENSTMTG00000004099 #33	IYD (ENSTMTG00000004119) #34
Testudinidae	ANCESTRAL SPECIES	4	ENSGT01030000235099	ENSGT00940000156483	ENSGT00390000008642	ENSGT00940000155634	ENSGT00940000160501	ENSGT00940000161252	ENSGT00950000183142.a.b.a.a	ENSGT00940000157012	ENSGT00530000063946.b	ENSGT00940000163429.D	ENSGT00940000154428 #17	ENSGT00940000163429.A	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133.h #26	ENSGT00940000158133.g #26	ENSGT00390000012924.a #27	ENSGT00530000064023 #28	ENSGT00960000189587	ENSGT00390000013337 #29	ENSGT00940000158401 #30	ENSGT00730000111244 #31	ENSGT00940000157477 #32	ENSGT00940000157723 #33	ENSGT00390000004348 #34	ENSGT00950000182985.b.a #35
Abingdon island giant tortoise	MODERN SPECIES	284														RGS17 (ENSCABG00000007167) #20	MTRF1L (ENSCABG00000007168) #21	FBXO5 (ENSCABG00000007171) #22	VIP (ENSCABG00000007176) #23	MYCT1 (ENSCABG00000007201) #24	ENSCABG00000007204	ENSCABG00000007210	ENSCABG00000007213	ENSCABG00000007218	ENSCABG00000007223	ESR1 (ENSCABG00000007260) #26
Goode s thornscrub tortoise	MODERN SPECIES	17	SNX9 (ENSGEVG00005020443)	ZDHHC14 (ENSGEVG00005020437)	TMEM242 (ENSGEVG00005020433)	ARID1B (ENSGEVG00005020376)	NOX3 (ENSGEVG00005020326)	CLDN20 (ENSGEVG00005020321)	TFB1M (ENSGEVG00005020318)	TIAM2 (ENSGEVG00005020313)	SCAF8 (ENSGEVG00005020295)	ENSGEVG00005020281	ENSGEVG00005020266	ENSGEVG00005020261 #19	ENSGEVG00005020259 #19	RGS17 (ENSGEVG00005020253) #20	MTRF1L (ENSGEVG00005020238) #21	FBXO5 (ENSGEVG00005020230) #22	VIP (ENSGEVG00005020226) #23	MYCT1 (ENSGEVG00005020222) #24	SYNE1 (ENSGEVG00005015272)	ESR1 (ENSGEVG00005013158) #26	CCDC170 (ENSGEVG00005012970) #27	ARMT1 (ENSGEVG00005012940) #28	RMND1 (ENSGEVG00005012911) #29	ZBTB2 (ENSGEVG00005012892) #30	AKAP12 (ENSGEVG00005012759) #31	MTHFD1L (ENSGEVG00005012612) #32	ENSGEVG00005012469 #33	IYD (ENSGEVG00005012422) #34	PPP1R14C (ENSGEVG00005012375) #35	LRP11 (ENSGEVG00005012143) #15	PCMT1 (ENSGEVG00005012105) #14
Chinese turtle	MODERN SPECIES	461	SNX9 (ENSPSIG00000011194)	ENSPSIG00000010386	ZDHHC14 (ENSPSIG00000010163)	TMEM242 (ENSPSIG00000009896)	ENSPSIG00000009413	ENSPSIG00000009333	NOX3 (ENSPSIG00000009070)	TFB1M (ENSPSIG00000006643)	TIAM2 (ENSPSIG00000009045)	SCAF8 (ENSPSIG00000008614)	ENSPSIG00000007371 #17	ENSPSIG00000006391	OPRM1 (ENSPSIG00000005901) #19	RGS17 (ENSPSIG00000005802) #20	MTRF1L (ENSPSIG00000005339) #21	FBXO5 (ENSPSIG00000005294) #22	ENSPSIG00000000120	VIP (ENSPSIG00000004987) #23	MYCT1 (ENSPSIG00000004949) #24	ENSPSIG00000004853	ENSPSIG00000004808	ENSPSIG00000004795	ENSPSIG00000004530	ESR1 (ENSPSIG00000004166) #26	CCDC170 (ENSPSIG00000004116) #27	ARMT1 (ENSPSIG00000004092) #28	RMND1 (ENSPSIG00000018248) #29	ZBTB2 (ENSPSIG00000018246) #30	AKAP12 (ENSPSIG00000018242) #31	MTHFD1L (ENSPSIG00000018016) #32	PLEKHG1 (ENSPSIG00000017610) #33
Anura	ANCESTRAL SPECIES	63	ENSGT00940000162752	ENSGT00940000156258	ENSGT00530000063558.B	ENSGT00390000011877	ENSGT00390000013931	ENSGT01030000234626.B	ENSGT00550000074878	ENSGT00390000013943	ENSGT00940000155089	ENSGT01090000260098.A	ENSGT00390000011342	ENSGT00940000155621	ENSGT00940000158236 #19	ENSGT00940000155393.d #20	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000011642 #24	ENSGT00940000154481.a.b	ENSGT00940000158133 #26	ENSGT00390000012924.a #27	ENSGT00940000158401 #30	ENSGT00950000182906.b.a	ENSGT00390000014904	ENSGT00940000162477	ENSGT01030000234595.A.b	ENSGT00730000111123
Leishan spiny toad	MODERN SPECIES	7	SLC22A2 (ENSLLEG00000019681)	GJE1 (ENSLLEG00000019977)	VTA1 (ENSLLEG00000020067)	ENSLLEG00000020254	ENSLLEG00000020412	ENSLLEG00000022180	ENSLLEG00000022200	ENSLLEG00000022276	OPRM1 (ENSLLEG00000022332) #19	ENSLLEG00000022512	ENSLLEG00000022562	ENSLLEG00000022588	RGS17 (ENSLLEG00000022614) #20	ENSLLEG00000022666	MTRF1L (ENSLLEG00000022723) #21	FBXO5 (ENSLLEG00000022912) #22	VIP (ENSLLEG00000022987) #23	MYCT1 (ENSLLEG00000023136) #24	SYNE1 (ENSLLEG00000023244)	ESR1 (ENSLLEG00000025142) #26	ENSLLEG00000025191	CCDC170 (ENSLLEG00000025215) #27	ENSLLEG00000025397	ZBTB2 (ENSLLEG00000025418) #30	STXBP5 (ENSLLEG00000025451)	ADGB (ENSLLEG00000025721)	RAB32 (ENSLLEG00000026313)	GRM1 (ENSLLEG00000026342)	ENSLLEG00000026410	ENSLLEG00000026498	ENSLLEG00000026758
Frog	MODERN SPECIES	5	utrn (ENSXETG00000022290)	ENSXETG00000048985	epm2a (ENSXETG00000017691)	birc6 (ENSXETG00000017697)	ENSXETG00000043085	ttc27 (ENSXETG00000017701)	ltbp1 (ENSXETG00000019349)	heatr5b (ENSXETG00000019350)	rasgrp3 (ENSXETG00000019354)	ENSXETG00000019357	ENSXETG00000042091	crim1 (ENSXETG00000010373)	gpatch11 (ENSXETG00000018544)	cebpzos (ENSXETG00000038064)	mtrf1l (ENSXETG00000018541) #21	fbxo5 (ENSXETG00000018545) #22	vip (ENSXETG00000027906) #23	myct1 (ENSXETG00000031735) #24	syne1 (ENSXETG00000012367)	esr1 (ENSXETG00000012364) #26	stxbp5 (ENSXETG00000029924)	ccdc170 (ENSXETG00000014590) #27	zbtb2 (ENSXETG00000012362) #30	adgb (ENSXETG00000047736)	rab32 (ENSXETG00000007893)	grm1 (ENSXETG00000007892)	ENSXETG00000045386	shprh (ENSXETG00000025060)	sult6b1.5 (ENSXETG00000030952)	tbc1d32 (ENSXETG00000007886)	sult6b1.2 (ENSXETG00000025065)
Coelacanth	MODERN SPECIES	1749														ENSLACG00000006971	MTRF1L (ENSLACG00000007118) #21	FBXO5 (ENSLACG00000009820) #22
Actinopterygii	ANCESTRAL SPECIES	109															ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000016757	ENSGT00390000003178	ENSGT00940000161693	ENSGT00940000162755	ENSGT00390000007551	ENSGT00390000007701	ENSGT00940000154987	ENSGT00390000001878	ENSGT00940000155129.B	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483	ENSGT00940000159641	ENSGT00940000155423
Neopterygii	ANCESTRAL SPECIES	151															ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a #23	ENSGT00390000016757	ENSGT00390000003178	ENSGT00940000161693	ENSGT00940000159084	ENSGT00390000007551	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.j	ENSGT00940000154987.i.b	ENSGT00390000001878	ENSGT00940000155129.B	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b	ENSGT00390000015299.a.b.b.b.d.a
Osteoglossocephalai	ANCESTRAL SPECIES	120	ENSGT00520000059926	ENSGT00390000001146	ENSGT00940000158246	ENSGT00940000154784.D.a.a.a	ENSGT00940000154784.D.b.c.b	ENSGT00940000154784.D.a.a.b.a.b	ENSGT00940000158672.c	ENSGT00390000001057	ENSGT00530000063402.b	ENSGT00390000001121	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00390000007551	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.j	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.B	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b	ENSGT00390000015299.a.b.b.b.d.a	ENSGT00940000155483	ENSGT00940000159641
Clupeocephala	ANCESTRAL SPECIES	63	ENSGT00950000183133.c.a	ENSGT00950000183133.c.b	ENSGT00390000003349	ENSGT00940000154632	ENSGT00940000158015.k.a	ENSGT00950000183000.d	ENSGT00940000154784.D.b.c.b	ENSGT00940000154784.D.a.a.b.a.b	ENSGT00940000158672.c	ENSGT00390000001121	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00390000003178	ENSGT00940000161693	ENSGT00940000159084	ENSGT00940000159934	ENSGT00940000160678.b	ENSGT00390000011103.A.p	ENSGT00390000005045	ENSGT00940000154864.a.a	ENSGT00940000155564.n	ENSGT00940000154864.b	ENSGT00940000155564.m	ENSGT00940000156568	ENSGT00940000177131
Euteleosteomorpha	ANCESTRAL SPECIES	219													ENSGT00940000155710.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000159084	ENSGT00940000159934	ENSGT00940000160678.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b	ENSGT00940000155564.m	ENSGT00940000156568	ENSGT00940000177131	ENSGT00950000183166.a.a.a.b.f	ENSGT00910000144152	ENSGT00440000033965
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT01000000222063	ENSGT00940000156169.a.b	ENSGT00390000007701	ENSGT00940000154987.j	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b	ENSGT00940000175780	ENSGT00940000156883	ENSGT00510000047589.x	ENSGT01030000234642.a.b.b.d.a.h	ENSGT00940000155710.a	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000159084	ENSGT00940000159934	ENSGT00940000160678.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b	ENSGT00940000155564.m	ENSGT00940000156568	ENSGT00940000177131	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b	ENSGT00440000033965
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	490													ENSGT01030000234642.a.b.b.d.a.h.a	ENSGT00940000155710.a.a	ENSGT00950000182898.a.a.a.a.b.h.e	ENSGT00530000063692.b.e #22	ENSGT00950000183154.a.b.c #23	ENSGT00390000016757	ENSGT00940000178131.b	ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.a.b	ENSGT00940000159084.lb.b.a	ENSGT01030000236912	ENSGT00940000159934.c	ENSGT00940000160678.b.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b.e	ENSGT00940000155564.m.a	ENSGT00940000156568.s.b	ENSGT00940000155559.a.a.p.b	ENSGT00390000014001.j.a	ENSGT00390000018199.b.l.b
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00840000130740.b	ENSGT00940000165311.b.n.b.b	ENSGT00990000211337	ENSGT00390000001878.c.a	ENSGT00940000155129.A.n	ENSGT00390000015299.a.b.b.b.d.b.b	ENSGT00940000155483.f.hb.a	ENSGT00940000163420.d	ENSGT00390000006619	ENSGT00940000175780	ENSGT00510000047589.x	ENSGT01010000222294.c.b.b.b.c.a.a.b.b.a	ENSGT01030000234642.a.b.b.d.a.h.a	ENSGT00940000155710.a.a	ENSGT00950000182898.a.a.a.a.b.h.e	ENSGT00530000063692.b.e #22	ENSGT00950000183154.a.b.c #23	ENSGT00390000016757	ENSGT00940000176022	ENSGT00940000178131.b	ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.a.b	ENSGT00940000159084.lb.b.a	ENSGT00940000159934.c	ENSGT00940000160678.b.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b.e	ENSGT00940000155564.m.a	ENSGT00940000156568.s.b	ENSGT01010000229725	ENSGT00940000155559.a.a.p.b	ENSGT00390000014001.j.a
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00390000008264.c.a	ENSGT00840000130740.b	ENSGT00940000165311.b.n.b.b	ENSGT00390000001878.d	ENSGT00940000155129.A.n	ENSGT00390000015299.a.b.b.b.d.b.b	ENSGT00940000155483.f.hb.a	ENSGT00940000163420.d	ENSGT00390000006619	ENSGT00940000175780	ENSGT00510000047589.x	ENSGT01010000222294.c.b.b.b.c.a.a.b.b.a	ENSGT01030000234642.a.b.b.d.a.h.a	ENSGT00940000155710.a.a	ENSGT00950000182898.a.a.a.a.b.h.e	ENSGT00530000063692.b.e #22	ENSGT00950000183154.a.b.c #23	ENSGT00390000016757	ENSGT00940000176022	ENSGT00940000178131.b	ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.a.b.a	ENSGT00940000159084.lb.b.a	ENSGT00940000159934.c	ENSGT00940000160678.b.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b.e	ENSGT00940000155564.m.a	ENSGT00940000156568.s.b	ENSGT01010000229725	ENSGT00940000155559.a.a.p.b	ENSGT00390000014001.j.a
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT01030000234539.b.b.b.a.b.b.b	ENSGT00390000008264.c.a	ENSGT00940000165311.b.n.b.b	ENSGT00390000001878.d	ENSGT00940000155129.A.m	ENSGT00390000015299.a.b.b.b.d.b.b	ENSGT00940000155483.f.hb.a	ENSGT00940000163420.d	ENSGT00390000006619	ENSGT00940000175780	ENSGT00510000047589.x	ENSGT01010000222294.c.b.b.b.c.a.a.b.b.a	ENSGT01030000234642.a.b.b.d.a.h.a	ENSGT00940000155710.a.a	ENSGT00950000182898.a.a.a.a.b.h.e	ENSGT00530000063692.b.e #22	ENSGT00950000183154.a.b.c #23	ENSGT00390000016757	ENSGT00940000176022	ENSGT00940000178131.b	ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.a.b.a	ENSGT00940000159084.lb.b.a	ENSGT00940000159934.c	ENSGT00940000160678.b.b	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b.e	ENSGT00940000155564.m.a	ENSGT00940000156568.s.b	ENSGT01010000229725	ENSGT00940000155559.a.a.p.b	ENSGT00390000014001.j.a
Chinook salmon	MODERN SPECIES		rps24 (ENSOTSG00005031256)	zmiz1a (ENSOTSG00005031249)	zcchc24 (ENSOTSG00005031246)	ENSOTSG00005031244	mrps5 (ENSOTSG00005031242)	slc8a1b (ENSOTSG00005031209)	MAP4K3 (ENSOTSG00005027514)	ENSOTSG00005027496	ENSOTSG00005027491	galm (ENSOTSG00005027486)	ENSOTSG00005027482	ENSOTSG00005026880	ENSOTSG00005026874	atl2 (ENSOTSG00005021933)	slc29a1a (ENSOTSG00005020385)	fbxo5 (ENSOTSG00005020364) #22	vip (ENSOTSG00005020329) #23	ANAPC1 (ENSOTSG00005020220)	ENSOTSG00005020194	ENSOTSG00005020193	ENSOTSG00005020192	ENSOTSG00005032118	slc30a6 (ENSOTSG00005032090)	ENSOTSG00005032085	ENSOTSG00005032084	SPTBN1 (ENSOTSG00005030613)	EML6 (ENSOTSG00005030436)	ENSOTSG00005030417	ENSOTSG00005030304	rps27a (ENSOTSG00005030299)	CCDC88A (ENSOTSG00005028673)
Coho salmon	MODERN SPECIES	2	zmiz1a (ENSOKIG00005018216)	zcchc24 (ENSOKIG00005018370)	ENSOKIG00005018383	mrps5 (ENSOKIG00005018404)	slc8a1b (ENSOKIG00005018441)	TMEM178A (ENSOKIG00005018483)	ENSOKIG00005018567	ENSOKIG00005019224	morn2 (ENSOKIG00005019240)	galm (ENSOKIG00005019273)	ENSOKIG00005019383	ENSOKIG00005019431	ENSOKIG00005019443	atl2 (ENSOKIG00005019605)	slc29a1a (ENSOKIG00005022427)	fbxo5 (ENSOKIG00005023550) #22	vip (ENSOKIG00005023562) #23	ANAPC1 (ENSOKIG00005023640)	ENSOKIG00005023925	ENSOKIG00005023940	ENSOKIG00005007476	ENSOKIG00005007485	SLC30A6 (ENSOKIG00005007528)	ENSOKIG00005007800	ENSOKIG00005007812	SPTBN1 (ENSOKIG00005007912)	EML6 (ENSOKIG00005008934)	ENSOKIG00005008999	ENSOKIG00005009053	ENSOKIG00005009062	CCDC88A (ENSOKIG00005009514)
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000047704	ENSOMYG00000062358	ENSOMYG00000047697	ENSOMYG00000051875	ENSOMYG00000054396	ENSOMYG00000047688	ENSOMYG00000047685	ENSOMYG00000054983	ENSOMYG00000047662	ENSOMYG00000047616	ENSOMYG00000047619	ENSOMYG00000047610	ENSOMYG00000047603	ENSOMYG00000047585	slc29a1a (ENSOMYG00000047565)	fbxo5 (ENSOMYG00000047543) #22	vip (ENSOMYG00000047540) #23	ENSOMYG00000047529	ENSOMYG00000047507	ENSOMYG00000048364	ENSOMYG00000068926	ENSOMYG00000047504	ENSOMYG00000047502	ENSOMYG00000047494	ENSOMYG00000047485	ENSOMYG00000047482	SPTBN1 (ENSOMYG00000046985)	ENSOMYG00000046365	ENSOMYG00000046305	ENSOMYG00000046297	ENSOMYG00000046292
Salmo	ANCESTRAL SPECIES	23	ENSGT00390000008264.c.a	ENSGT00940000165311.b.n.b.b	ENSGT00990000211337	ENSGT00390000001878.c.a	ENSGT00940000155129.A.n	ENSGT00390000015299.a.b.b.b.d.b.b	ENSGT00940000155483.f.hb.a	ENSGT00940000163420.d	ENSGT00390000006619	ENSGT00940000175780	ENSGT00510000047589.x	ENSGT01010000222294.c.b.b.b.c.a.a.b.b.a	ENSGT01030000234642.a.b.b.d.a.h.a	ENSGT00940000155710.a.a	ENSGT00950000182898.a.a.a.a.b.h.e	ENSGT00530000063692.b.e #22	ENSGT00950000183154.a.b.c #23	ENSGT00390000016757	ENSGT00940000176022	ENSGT00940000178131.b	ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.a.b	ENSGT00940000159084.lb.b.a	ENSGT00940000159934.c	ENSGT00940000160678.b.b	ENSGT00390000011103.A.q.c	ENSGT00940000154864.a.b.e	ENSGT00940000155564.m.a	ENSGT00940000156568.s.b	ENSGT01010000229725	ENSGT00940000155559.a.a.p.b	ENSGT00390000014001.j.a
River trout	MODERN SPECIES	9	zcchc24 (ENSSTUG00000008273)	ENSSTUG00000008247	ENSSTUG00000008229	mrps5 (ENSSTUG00000008207)	slc8a1b (ENSSTUG00000008176)	TMEM178A (ENSSTUG00000008164)	ENSSTUG00000006570	ENSSTUG00000006497	ENSSTUG00000006484	galm (ENSSTUG00000006452)	ENSSTUG00000006446	ENSSTUG00000006429	HNRNPLL (ENSSTUG00000005592)	atl2 (ENSSTUG00000005036)	slc29a1a (ENSSTUG00000004633)	fbxo5 (ENSSTUG00000004609) #22	vip (ENSSTUG00000004552) #23	ANAPC1 (ENSSTUG00000003618)	ENSSTUG00000003544	ENSSTUG00000003542	ENSSTUG00000003535	ENSSTUG00000003521	ENSSTUG00000003483	slc30a6 (ENSSTUG00000003416)	ENSSTUG00000003400	ENSSTUG00000003390	SPTBN1 (ENSSTUG00000002895)	EML6 (ENSSTUG00000002415)	ENSSTUG00000002317	rps27a (ENSSTUG00000001708)	ENSSTUG00000050859
Atlantic salmon	MODERN SPECIES		ENSSSAG00000074209	zcchc24 (ENSSSAG00000099506)	ENSSSAG00000074189	ENSSSAG00000074185	ENSSSAG00000074176	ENSSSAG00000074168	TMEM178A (ENSSSAG00000082532)	MAP4K3 (ENSSSAG00000073966)	ENSSSAG00000073952	morn2 (ENSSSAG00000092989)	galm (ENSSSAG00000073948)	ENSSSAG00000073946	hnrll (ENSSSAG00000072945)	ENSSSAG00000096804	slc29a1a (ENSSSAG00000084437)	fbxo5 (ENSSSAG00000071896) #22	vip (ENSSSAG00000071873) #23	ENSSSAG00000060075	ENSSSAG00000106361	ENSSSAG00000083377	ENSSSAG00000094353	ENSSSAG00000059556	znt6 (ENSSSAG00000059248)	ENSSSAG00000114327	ENSSSAG00000059205	ENSSSAG00000084714	SPTBN1 (ENSSSAG00000056346)	ENSSSAG00000055799	rtn10 (ENSSSAG00000055711)	ENSSSAG00000107836	ENSSSAG00000033263
Huchen	MODERN SPECIES	396			ENSHHUG00000048497	TMEM178A (ENSHHUG00000048501)	MAP4K3 (ENSHHUG00000048512)	ENSHHUG00000048639	ENSHHUG00000048651	ENSHHUG00000048656	ENSHHUG00000048658	ENSHHUG00000048661	galm (ENSHHUG00000048669)	HNRNPLL (ENSHHUG00000048682)	ENSHHUG00000048813	atl2 (ENSHHUG00000048816)	slc29a1a (ENSHHUG00000048884)	fbxo5 (ENSHHUG00000048923) #22	vip (ENSHHUG00000048929) #23	ANAPC1 (ENSHHUG00000048976)	ENSHHUG00000049013	ENSHHUG00000049016	ENSHHUG00000049026	ENSHHUG00000049029	ENSHHUG00000049034
Salmoninae	ANCESTRAL SPECIES	557					ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b.a	ENSGT00940000155483.f.hb.b	ENSGT00940000163420.c	ENSGT00940000175997	ENSGT00940000156883	ENSGT00510000047589.x	ENSGT01030000234642.a.b.b.d.a.h.b	ENSGT00940000155710.a.b	ENSGT00950000182898.a.a.a.a.b.h.f	ENSGT00940000155683 #21	ENSGT00530000063692.b.f #22	ENSGT00950000183154.a.b.d #23	ENSGT00940000178131.a	ENSGT00940000161693	ENSGT00940000159084.lb.b.b	ENSGT00940000159934.d
Huchen	MODERN SPECIES	784												HNRNPLL (ENSHHUG00000030700)	atl2 (ENSHHUG00000030586)	slc29a1a (ENSHHUG00000030538)	MTRF1L (ENSHHUG00000030531) #21	fbxo5 (ENSHHUG00000030525) #22	vip (ENSHHUG00000030469) #23	ENSHHUG00000030464	ENSHHUG00000030458	ENSHHUG00000030456	ENSHHUG00000030450	ACOXL (ENSHHUG00000030413)	ENSHHUG00000030408	SLC30A6 (ENSHHUG00000030404)
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000156169.a.b	ENSGT00390000007701	ENSGT00940000154987.j	ENSGT00390000001878.c.b	ENSGT00940000155129.A.m	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b.a	ENSGT00940000155483.f.hb.b	ENSGT00940000163420.c	ENSGT00940000175997	ENSGT00940000156883	ENSGT01030000234642.a.b.b.d.a.h.b	ENSGT00940000155710.a.b	ENSGT00950000182898.a.a.a.a.b.h.f	ENSGT00940000155683 #21	ENSGT00530000063692.b.f #22	ENSGT00950000183154.a.b.d #23	ENSGT01010000230060	ENSGT00940000178131.a	ENSGT00940000161693	ENSGT00940000159084.lb.b.b	ENSGT00940000159934.d	ENSGT00940000160678.b.a	ENSGT00940000154864.a.b.f	ENSGT00940000155564.m.b	ENSGT00940000156568.s.a	ENSGT00940000177131	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b	ENSGT00440000033965	ENSGT00940000155559.a.a.p.a
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000156169.a.b	ENSGT00390000007701	ENSGT00940000154987.j	ENSGT00390000001878.c.b	ENSGT00940000155129.A.m	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b.a	ENSGT00940000155483.f.hb.b	ENSGT00940000163420.c	ENSGT00940000175997	ENSGT00940000156883	ENSGT01030000234642.a.b.b.d.a.h.b	ENSGT00940000155710.a.b	ENSGT00950000182898.a.a.a.a.b.h.f	ENSGT00940000155683 #21	ENSGT00530000063692.b.f #22	ENSGT00950000183154.a.b.d #23	ENSGT01010000230060	ENSGT00940000178131.a	ENSGT00940000161693	ENSGT00940000159084.lb.b.b	ENSGT00940000159934.d	ENSGT00940000160678.b.a	ENSGT00940000154864.a.b.f	ENSGT00940000155564.m.b	ENSGT00940000156568.s.a	ENSGT00940000177131	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b	ENSGT00440000033965	ENSGT00940000155559.a.a.p.a
River trout	MODERN SPECIES	35	SLC16A12 (ENSSTUG00000000653)	nphp1 (ENSSTUG00000000669)	ENSSTUG00000000744	mrps5 (ENSSTUG00000000754)	slc8a1b (ENSSTUG00000000763)	THUMPD2 (ENSSTUG00000000772)	TMEM178A (ENSSTUG00000000779)	MAP4K3 (ENSSTUG00000000936)	ENSSTUG00000003653	ENSSTUG00000003675	DHX57 (ENSSTUG00000003709)	HNRNPLL (ENSSTUG00000004679)	atl2 (ENSSTUG00000005357)	slc29a1a (ENSSTUG00000009975)	MTRF1L (ENSSTUG00000010192) #21	fbxo5 (ENSSTUG00000010205) #22	vip (ENSSTUG00000010215) #23	ENSSTUG00000010246	ACOXL (ENSSTUG00000010266)	ENSSTUG00000010368	slc30a6 (ENSSTUG00000010409)	ENSSTUG00000010718	SPTBN1 (ENSSTUG00000010750)	EML6 (ENSSTUG00000011309)	ENSSTUG00000011579	CLHC1 (ENSSTUG00000011654)	ENSSTUG00000011665	prorsd1 (ENSSTUG00000011672)	CCDC88A (ENSSTUG00000011831)	PNPT1 (ENSSTUG00000018258)	ppp4r3b (ENSSTUG00000018621)
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000100430	ENSSSAG00000084508	mrps5 (ENSSSAG00000112547)	slc8a1b (ENSSSAG00000053320)	ENSSSAG00000098523	THUMPD2 (ENSSSAG00000107000)	ENSSSAG00000053293	MAP4K3 (ENSSSAG00000008284)	ENSSSAG00000007940	ENSSSAG00000007888	ENSSSAG00000087037	ENSSSAG00000006260	ENSSSAG00000075569	slc29a1a (ENSSSAG00000071913)	MTRF1L (ENSSSAG00000105115) #21	fbxo5 (ENSSSAG00000075380) #22	vip (ENSSSAG00000075350) #23	ENSSSAG00000108298	vip (ENSSSAG00000102013) #23	ENSSSAG00000082999	ENSSSAG00000111437	ENSSSAG00000092701	acoxl (ENSSSAG00000075278)	ENSSSAG00000075267	ENSSSAG00000075237	ENSSSAG00000109360	ENSSSAG00000112323	SPTBN1 (ENSSSAG00000075019)	ENSSSAG00000105890	ENSSSAG00000074922	ENSSSAG00000074891
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000156169.a.b	ENSGT00390000007701	ENSGT00940000154987.j	ENSGT00940000155129.A.m	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b.a	ENSGT00940000155483.f.hb.b	ENSGT00940000163420.c	ENSGT00940000175997	ENSGT00940000156883	ENSGT01020000231038.a.b	ENSGT01030000234642.a.b.b.d.a.h.b	ENSGT00940000155710.a.b	ENSGT00950000182898.a.a.a.a.b.h.f	ENSGT00940000155683 #21	ENSGT00530000063692.b.f #22	ENSGT00950000183154.a.b.d #23	ENSGT01010000230060	ENSGT00940000178131.a	ENSGT00940000161693	ENSGT00940000159084.lb.b.b	ENSGT00940000159934.d	ENSGT00940000160678.b.a	ENSGT00940000154864.a.b.f	ENSGT00940000155564.m.b	ENSGT00940000156568.s.a	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b	ENSGT00440000033965	ENSGT00940000155559.a.a.p.a	ENSGT00390000014001.j.b
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000165311.b.n.b.a	ENSGT00940000156169.a.b	ENSGT00390000007701	ENSGT00940000154987.j	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.d.b.a	ENSGT00940000155483.f.hb.b	ENSGT00940000163420.c	ENSGT00940000175997	ENSGT00940000156883	ENSGT01020000231038.a.b	ENSGT01030000234642.a.b.b.d.a.h.b	ENSGT00940000155710.a.b	ENSGT00950000182898.a.a.a.a.b.h.f	ENSGT00940000155683 #21	ENSGT00530000063692.b.f #22	ENSGT00950000183154.a.b.d #23	ENSGT01010000230060	ENSGT00940000178131.a	ENSGT00940000161693	ENSGT00940000159084.lb.b.b	ENSGT00940000159934.d	ENSGT00940000160678.b.a	ENSGT00940000154864.a.b.f	ENSGT00940000155564.m.b	ENSGT00940000156568.s.a	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b	ENSGT00440000033965	ENSGT00940000155559.a.a.p.a	ENSGT00390000014001.j.b
Coho salmon	MODERN SPECIES	24	MAL (ENSOKIG00005023926)	ENSOKIG00005023891	ENSOKIG00005023882	ENSOKIG00005023829	THUMPD2 (ENSOKIG00005023806)	TMEM178A (ENSOKIG00005023797)	MAP4K3 (ENSOKIG00005021532)	ENSOKIG00005021343	ENSOKIG00005021327	DHX57 (ENSOKIG00005021149)	ENSOKIG00005021125	HNRNPLL (ENSOKIG00005020737)	ATL2 (ENSOKIG00005020388)	slc29a1a (ENSOKIG00005020149)	MTRF1L (ENSOKIG00005020094) #21	fbxo5 (ENSOKIG00005020081) #22	vip (ENSOKIG00005020050) #23	ENSOKIG00005020023	ENSOKIG00005049425	ENSOKIG00005049420	ACOXL (ENSOKIG00005049369)	ENSOKIG00005049359	SLC30A6 (ENSOKIG00005049327)	ENSOKIG00005049305	SPTBN1 (ENSOKIG00005049096)	EML6 (ENSOKIG00005049034)	ENSOKIG00005048955	CLHC1 (ENSOKIG00005048923)	ENSOKIG00005048912	prorsd1 (ENSOKIG00005048909)	ENSOKIG00005048901
Chinook salmon	MODERN SPECIES	30	ENSOTSG00005017890	ENSOTSG00005017889	SLC16A12 (ENSOTSG00005017888)	nphp1 (ENSOTSG00005017884)	slc8a1b (ENSOTSG00005017882)	THUMPD2 (ENSOTSG00005017871)	TMEM178A (ENSOTSG00005017868)	MAP4K3 (ENSOTSG00005016971)	ENSOTSG00005016941	ENSOTSG00005016940	DHX57 (ENSOTSG00005016812)	HNRNPLL (ENSOTSG00005016563)	atl2 (ENSOTSG00005013619)	slc29a1a (ENSOTSG00005013469)	MTRF1L (ENSOTSG00005013456) #21	fbxo5 (ENSOTSG00005013454) #22	vip (ENSOTSG00005013452) #23	ENSOTSG00005013447	ACOXL (ENSOTSG00005013354)	ENSOTSG00005013351	slc30a6 (ENSOTSG00005012853)	ENSOTSG00005012851	SPTBN1 (ENSOTSG00005002238)	EML6 (ENSOTSG00005001179)	ENSOTSG00005000774	CLHC1 (ENSOTSG00005041079)	rps27a (ENSOTSG00005041077)	prorsd1 (ENSOTSG00005041076)	CCDC88A (ENSOTSG00005040057)	PNPT1 (ENSOTSG00005037929)	PPP4R3C (ENSOTSG00005033376)
Rainbow trout	MODERN SPECIES		ENSOMYG00000065648	ENSOMYG00000047328	ENSOMYG00000065709	THUMPD2 (ENSOMYG00000047320)	TMEM178A (ENSOMYG00000047317)	MAP4K3 (ENSOMYG00000047165)	ENSOMYG00000047034	ENSOMYG00000047053	DHX57 (ENSOMYG00000046997)	ENSOMYG00000046973	ENSOMYG00000046960	ENSOMYG00000046944	slc29a1a (ENSOMYG00000046920)	ENSOMYG00000003116	MTRF1L (ENSOMYG00000046907) #21	fbxo5 (ENSOMYG00000046902) #22	vip (ENSOMYG00000046898) #23	ENSOMYG00000057506	ENSOMYG00000046892	ENSOMYG00000046876	ENSOMYG00000046866	ENSOMYG00000046846	ENSOMYG00000046830	SPTBN1 (ENSOMYG00000046731)	EML6 (ENSOMYG00000046597)	rtn4 (ENSOMYG00000046657)	CLHC1 (ENSOMYG00000046613)	ENSOMYG00000068415	ENSOMYG00000046578	ENSOMYG00000068063	CCDC88A (ENSOMYG00000045489)
Northern pike	MODERN SPECIES	5	slc8a1b (ENSELUG00000003701)	THUMPD2 (ENSELUG00000003735)	ENSELUG00000003745	TMEM178A (ENSELUG00000003759)	TMEM178A (ENSELUG00000024901)	MAP4K3 (ENSELUG00000003860)	ENSELUG00000003894	morn2 (ENSELUG00000003911)	DHX57 (ENSELUG00000003961)	galm (ENSELUG00000001530)	HNRNPLL (ENSELUG00000004000)	ENSELUG00000000125	atl2 (ENSELUG00000004041)	slc29a1a (ENSELUG00000004077)	MTRF1L (ENSELUG00000004095) #21	fbxo5 (ENSELUG00000004099) #22	ENSELUG00000033443	vip (ENSELUG00000004119) #23	ANAPC1 (ENSELUG00000004156)	ENSELUG00000004177	ENSELUG00000004193	ACOXL (ENSELUG00000004221)	sult6b1 (ENSELUG00000004250)	slc30a6 (ENSELUG00000004276)	ENSELUG00000001364	ACYP2 (ENSELUG00000004300)	SPTBN1 (ENSELUG00000004379)	EML6 (ENSELUG00000004436)	RTN4 (ENSELUG00000004490)	CLHC1 (ENSELUG00000004519)	rps27a (ENSELUG00000004527)
Acanthomorphata	ANCESTRAL SPECIES	114																ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b.c	ENSGT00940000155483.f
Euacanthomorphacea	ANCESTRAL SPECIES	57			ENSGT00940000157037.b.b.b	ENSGT00940000154372.b	ENSGT00940000155648.B.b	ENSGT00940000157750	ENSGT00940000155896.k	ENSGT00940000153956.a.b	ENSGT00940000163454.a.a.a.b.a.a.b	ENSGT00940000155989.e	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00530000064150	ENSGT00740000116878	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420
Pinecone sodierfish	MODERN SPECIES	6	ENSMMDG00005022010	ENSMMDG00005021957	ARFGEF3 (ENSMMDG00005021925)	ENSMMDG00005021910	ENSMMDG00005021907	ENSMMDG00005021906	ENSMMDG00005021905	ENSMMDG00005021903	lhb (ENSMMDG00005021902)	ENSMMDG00005021900	ENSMMDG00005021898	lhb (ENSMMDG00005021896)	cox20 (ENSMMDG00005021894)	desi2 (ENSMMDG00005021891)	MTRF1L (ENSMMDG00005021887) #21	fbxo5 (ENSMMDG00005021884) #22	vip (ENSMMDG00005021881) #23	ANAPC1 (ENSMMDG00005020391)	ENSMMDG00005020325	ACOXL (ENSMMDG00005020238)	SLC16A12 (ENSMMDG00005020226)	pank1a (ENSMMDG00005020219)	zgc:65997 (ENSMMDG00005020213)	nphp1 (ENSMMDG00005020205)	malb (ENSMMDG00005020197)	malb (ENSMMDG00005020162)	mrps5 (ENSMMDG00005020156)	slc8a1b (ENSMMDG00005020131)	ENSMMDG00005020127	MAP4K3 (ENSMMDG00005019984)	ENSMMDG00005019973
Percomorphaceae	ANCESTRAL SPECIES	46	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b
Tiger tail seahorse	MODERN SPECIES	103	chrna1 (ENSHCOG00000002989)	ENSHCOG00000003004	ENSHCOG00000003010	ENSHCOG00000003047	mtx2 (ENSHCOG00000003068)	ENSHCOG00000003083	SYNPO2L (ENSHCOG00000003093)	MYOZ1 (ENSHCOG00000003097)	hhat (ENSHCOG00000003116)	kcnh1a (ENSHCOG00000003141)	mrpl57 (ENSHCOG00000003154)	cyp3c3 (ENSHCOG00000000090)	desi2 (ENSHCOG00000003191)	MTRF1L (ENSHCOG00000003212) #21	CDT1 (ENSHCOG00000003220)	fbxo5 (ENSHCOG00000003227) #22	vip (ENSHCOG00000003242) #23	ENSHCOG00000003251	ANAPC1 (ENSHCOG00000003512)	ENSHCOG00000003537	GRXCR2 (ENSHCOG00000003564)	PLAC8L1 (ENSHCOG00000003577)	LARS1 (ENSHCOG00000003651)	RBM27 (ENSHCOG00000003684)	pou4f3 (ENSHCOG00000003698)	RAD50 (ENSHCOG00000003765)	drd1b (ENSHCOG00000003799)	msx2b (ENSHCOG00000003812)	nsg2 (ENSHCOG00000003825)	CPEB4 (ENSHCOG00000003846)	ENSHCOG00000003861
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Oryzias	ANCESTRAL SPECIES	6	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.g.a.a	ENSGT00950000182958.b.a.b.g.a.b	ENSGT00950000182958.b.a.b.g.b	ENSGT00950000182958.b.a.b.h	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00940000157037.b.b.b	ENSGT01000000214725.D	ENSGT00940000154372.b	ENSGT00940000155648.B.b	ENSGT00940000157750
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.g.a.a	ENSGT00950000182958.b.a.b.g.a.b	ENSGT00950000182958.b.a.b.g.b	ENSGT00950000182958.b.a.b.h	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00990000207825	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00940000157037.b.b.b	ENSGT01000000214725.D	ENSGT00940000154372.b	ENSGT00940000155648.B.b
Indian medaka	MODERN SPECIES	27	CCDC88A (ENSOMEG00000012458)	CCDC88A (ENSOMEG00000012493)	ENSOMEG00000012683	ENSOMEG00000012730	SYNPO2L (ENSOMEG00000012748)	MYOZ1 (ENSOMEG00000012766)	hhat (ENSOMEG00000012815)	kcnh1a (ENSOMEG00000012867)	mrpl57 (ENSOMEG00000012875)	ENSOMEG00000012892	ENSOMEG00000012937	ENSOMEG00000012978	ENSOMEG00000000329	desi2 (ENSOMEG00000013040)	ENSOMEG00000013067 #21	fbxo5 (ENSOMEG00000013094) #22	vip (ENSOMEG00000013108) #23	ANAPC1 (ENSOMEG00000013202)	SLC16A12 (ENSOMEG00000013287)	pank1a (ENSOMEG00000013382)	zgc:65997 (ENSOMEG00000013417)	nphp1 (ENSOMEG00000013481)	ENSOMEG00000013512	ENSOMEG00000013521	malb (ENSOMEG00000000767)	mrps5 (ENSOMEG00000013610)	slc8a1b (ENSOMEG00000013705)	ENSOMEG00000013760	ENSOMEG00000013787	cuedc1b (ENSOMEG00000013817)	NLRX1 (ENSOMEG00000013878)
Javanese ricefish	MODERN SPECIES	6	ppp4r3b (ENSOJAG00000011569)	PNPT1 (ENSOJAG00000010173)	CCDC88A (ENSOJAG00000009850)	ENSOJAG00000009276	ENSOJAG00000009063	SYNPO2L (ENSOJAG00000009041)	ENSOJAG00000009019	hhat (ENSOJAG00000009008)	kcnh1a (ENSOJAG00000008872)	mrpl57 (ENSOJAG00000008833)	ENSOJAG00000008780	ENSOJAG00000008641	ENSOJAG00000008272	desi2 (ENSOJAG00000008201)	MTRF1L (ENSOJAG00000008184) #21	fbxo5 (ENSOJAG00000008173) #22	vip (ENSOJAG00000008129) #23	ANAPC1 (ENSOJAG00000007662)	SLC16A12 (ENSOJAG00000007524)	pank1a (ENSOJAG00000007501)	zgc:65997 (ENSOJAG00000007479)	ENSOJAG00000007360	malb (ENSOJAG00000007351)	mrps5 (ENSOJAG00000007323)	ENSOJAG00000007234	slc8a1b (ENSOJAG00000006243)	ENSOJAG00000006088	FGFBP3 (ENSOJAG00000006062)	ENSOJAG00000006017	ppp1r3ca (ENSOJAG00000017566)	HECTD2 (ENSOJAG00000017317)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.g.a.a	ENSGT00950000182958.b.a.b.g.a.b	ENSGT00950000182958.b.a.b.g.b	ENSGT00950000182958.b.a.b.h	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a.b	ENSGT00940000154987.i.a.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00940000157037.b.b.b	ENSGT01000000214725.D	ENSGT00940000154372.b	ENSGT00940000155648.B.b
Chinese medaka	MODERN SPECIES	1079	PPP4R3C (ENSOSIG00000013944)	PNPT1 (ENSOSIG00000015998)	CCDC88A (ENSOSIG00000016013)	ENSOSIG00000016034	ENSOSIG00000016618	SYNPO2L (ENSOSIG00000016619)	MYOZ1 (ENSOSIG00000016620)	hhat (ENSOSIG00000016622)	kcnh1a (ENSOSIG00000016627)	mrpl57 (ENSOSIG00000016636)	ENSOSIG00000016654	ENSOSIG00000016985	ENSOSIG00000016991	desi2 (ENSOSIG00000016993)	MTRF1L (ENSOSIG00000016997) #21	fbxo5 (ENSOSIG00000017001) #22	vip (ENSOSIG00000017011) #23	ANAPC1 (ENSOSIG00000017070)	SLC16A12 (ENSOSIG00000017091)	pank1a (ENSOSIG00000017096)	ENSOSIG00000017101	ENSOSIG00000017102	malb (ENSOSIG00000017106)	mrps5 (ENSOSIG00000017117)	ENSOSIG00000017228	slc8a1b (ENSOSIG00000017234)	ENSOSIG00000017258	ENSOSIG00000017260	ENSOSIG00000017262	ppp1r3ca (ENSOSIG00000017263)	HECTD2 (ENSOSIG00000017269)
Japanese Medaka HdrR	MODERN SPECIES	6	CCDC88A (ENSORLG00000004272)	ENSORLG00000004170	ENSORLG00000004101	ENSORLG00000004094	MYOZ1 (ENSORLG00000004086)	hhat (ENSORLG00000004072)	kcnh1a (ENSORLG00000004060)	ENSORLG00000022257	mrpl57 (ENSORLG00000029659)	ENSORLG00000004010	ENSORLG00000003987	ENSORLG00000003976	ENSORLG00000003970	desi2 (ENSORLG00000003945)	MTRF1L (ENSORLG00000003924) #21	fbxo5 (ENSORLG00000003909) #22	vip (ENSORLG00000003905) #23	ENSORLG00000030127	ANAPC1 (ENSORLG00000003899)	SLC16A12 (ENSORLG00000003870)	pank1a (ENSORLG00000003838)	zgc:65997 (ENSORLG00000003827)	nphp1 (ENSORLG00000003818)	ENSORLG00000029066	ENSORLG00000003791	malb (ENSORLG00000022246)	mrps5 (ENSORLG00000003768)	slc8a1b (ENSORLG00000003757)	ENSORLG00000018929	ENSORLG00000018937	ENSORLG00000027800
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.j	ENSGT00950000182958.b.a.b.i	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
NAME_4	ANCESTRAL SPECIES	180	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.j	ENSGT00950000182958.b.a.b.i	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878
Mummichog	MODERN SPECIES	2403	cfap36 (ENSFHEG00000006417)	ppp4r3b (ENSFHEG00000006447)	PNPT1 (ENSFHEG00000006495)	CCDC88A (ENSFHEG00000006673)	CAMK2G (ENSFHEG00000000177)	ENSFHEG00000006775	SYNPO2L (ENSFHEG00000006782)	ENSFHEG00000006785	hhat (ENSFHEG00000006795)	kcnh1a (ENSFHEG00000006827)	ENSFHEG00000006862	ENSFHEG00000006955	ENSFHEG00000006976	desi2 (ENSFHEG00000006996)	MTRF1L (ENSFHEG00000007025) #21	fbxo5 (ENSFHEG00000007034) #22	vip (ENSFHEG00000007059) #23	ANAPC1 (ENSFHEG00000007301)	ENSFHEG00000007329	SLC16A12 (ENSFHEG00000007336)	ENSFHEG00000007388	ENSFHEG00000007392	ENSFHEG00000007400	zgc:65997 (ENSFHEG00000007411)	nphp1 (ENSFHEG00000007415)	ENSFHEG00000007424	malb (ENSFHEG00000007445)	mrps5 (ENSFHEG00000007507)
Sheepshead minnow	MODERN SPECIES	382	cfap36 (ENSCVAG00000009925)	ppp4r3b (ENSCVAG00000009963)	PNPT1 (ENSCVAG00000010037)	CCDC88A (ENSCVAG00000010495)	ENSCVAG00000010691	ENSCVAG00000010743	SYNPO2L (ENSCVAG00000010806)	ENSCVAG00000010813	MYOZ1 (ENSCVAG00000010821)	hhat (ENSCVAG00000010832)	kcnh1a (ENSCVAG00000010872)	mrpl57 (ENSCVAG00000010878)	cyp3c4 (ENSCVAG00000000762)	desi2 (ENSCVAG00000010907)	ENSCVAG00000010936 #21	fbxo5 (ENSCVAG00000010946) #22	vip (ENSCVAG00000010970) #23	ANAPC1 (ENSCVAG00000011099)	ENSCVAG00000011106	SLC16A12 (ENSCVAG00000011130)	pank1a (ENSCVAG00000011164)	zgc:65997 (ENSCVAG00000011180)	nphp1 (ENSCVAG00000011237)
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.j	ENSGT00950000182958.b.a.b.i	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Poecilia	ANCESTRAL SPECIES	11	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00390000000153.h	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.j	ENSGT00950000182958.b.a.b.i	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291.d
NAME_6	ANCESTRAL SPECIES	174												ENSGT00950000182958.b.a.b.j.a	ENSGT00950000182958.b.a.b.i	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291.d
Amazon molly	MODERN SPECIES	292	CCDC88A (ENSPFOG00000009569)	CAMK2G (ENSPFOG00000009317)	ENSPFOG00000009266	ENSPFOG00000009250	SYNPO2L (ENSPFOG00000009227)	MYOZ1 (ENSPFOG00000009200)	hhat (ENSPFOG00000009114)	rps24 (ENSPFOG00000009073)	ENSPFOG00000008972	ENSPFOG00000024839	kcnh1a (ENSPFOG00000009004)	ENSPFOG00000008633	ENSPFOG00000008624	desi2 (ENSPFOG00000008583)	ENSPFOG00000008440 #21	fbxo5 (ENSPFOG00000008399) #22	vip (ENSPFOG00000008366) #23	ANAPC1 (ENSPFOG00000007648)	SLC16A12 (ENSPFOG00000007489)	pank1a (ENSPFOG00000007398)	zgc:65997 (ENSPFOG00000007367)	nphp1 (ENSPFOG00000006938)	ENSPFOG00000006916	malb (ENSPFOG00000006896)	mrps5 (ENSPFOG00000006753)	slc8a1b (ENSPFOG00000006514)	ENSPFOG00000023250	ENSPFOG00000006461	MAP4K3 (ENSPFOG00000005304)	ENSPFOG00000005124	ENSPFOG00000005109
Sailfin molly	MODERN SPECIES	1536															MTRF1L (ENSPLAG00000014010) #21	fbxo5 (ENSPLAG00000014015) #22	vip (ENSPLAG00000014062) #23	ANAPC1 (ENSPLAG00000014227)
Guppy	MODERN SPECIES	445	ppp4r3b (ENSPREG00000003138)	PNPT1 (ENSPREG00000003072)	CCDC88A (ENSPREG00000002964)	CAMK2G (ENSPREG00000002915)	ENSPREG00000002897	SYNPO2L (ENSPREG00000002884)	MYOZ1 (ENSPREG00000002801)	hhat (ENSPREG00000002761)	rps24 (ENSPREG00000002601)	kcnh1a (ENSPREG00000002539)	mrpl57 (ENSPREG00000002528)	ENSPREG00000002452	ENSPREG00000002404	desi2 (ENSPREG00000002373)	MTRF1L (ENSPREG00000002347) #21	fbxo5 (ENSPREG00000002295) #22	vip (ENSPREG00000002280) #23	ANAPC1 (ENSPREG00000002130)	ENSPREG00000002100	SLC16A12 (ENSPREG00000002055)	pank1a (ENSPREG00000002008)	zgc:65997 (ENSPREG00000001977)	nphp1 (ENSPREG00000001951)	ENSPREG00000001842	malb (ENSPREG00000001744)	mrps5 (ENSPREG00000001722)	slc8a1b (ENSPREG00000001659)	ENSPREG00000001603	MAP4K3 (ENSPREG00000001518)	ENSPREG00000001493	slc17a5 (ENSPREG00000001453)
Platyfish	MODERN SPECIES	14	cfap36 (ENSXMAG00000016873)	ppp4r3b (ENSXMAG00000016887)	PNPT1 (ENSXMAG00000016907)	CCDC88A (ENSXMAG00000016937)	CAMK2G (ENSXMAG00000026011)	ENSXMAG00000023549	SYNPO2L (ENSXMAG00000021760)	ENSXMAG00000017039	hhat (ENSXMAG00000017050)	kcnh1a (ENSXMAG00000017065)	ENSXMAG00000017125	ENSXMAG00000026665	ENSXMAG00000024454	desi2 (ENSXMAG00000024233)	MTRF1L (ENSXMAG00000017158) #21	fbxo5 (ENSXMAG00000029459) #22	vip (ENSXMAG00000017180) #23	ANAPC1 (ENSXMAG00000017183)	ENSXMAG00000027713	ENSXMAG00000024064	SLC16A12 (ENSXMAG00000017203)	ENSXMAG00000021263	ENSXMAG00000026492	pank1a (ENSXMAG00000015452)	zgc:65997 (ENSXMAG00000015470)	nphp1 (ENSXMAG00000015471)	ENSXMAG00000029559	malb (ENSXMAG00000023290)	mrps5 (ENSXMAG00000028833)	slc8a1b (ENSXMAG00000017251)	ENSXMAG00000017249
Aplocheiloidei	ANCESTRAL SPECIES	22	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Mangrove rivulus	MODERN SPECIES	3	wnt8b (ENSKMAG00000017528)	scdb (ENSKMAG00000017508)	trmt2b (ENSKMAG00000017504)	PNPT1 (ENSKMAG00000017389)	CCDC88A (ENSKMAG00000017278)	CAMK2G (ENSKMAG00000017204)	ENSKMAG00000017195	SYNPO2L (ENSKMAG00000017186)	MYOZ1 (ENSKMAG00000017172)	hhat (ENSKMAG00000017156)	kcnh1a (ENSKMAG00000017130)	mrpl57 (ENSKMAG00000017113)	cyp3c3 (ENSKMAG00000017055)	desi2 (ENSKMAG00000017030)	MTRF1L (ENSKMAG00000017018) #21	fbxo5 (ENSKMAG00000017000) #22	vip (ENSKMAG00000016983) #23	ANAPC1 (ENSKMAG00000016819)	ENSKMAG00000016777	SLC16A12 (ENSKMAG00000016741)	pank1a (ENSKMAG00000016704)	zgc:65997 (ENSKMAG00000016685)	nphp1 (ENSKMAG00000016651)	ENSKMAG00000016627	ENSKMAG00000016619	malb (ENSKMAG00000016605)	mrps5 (ENSKMAG00000016581)	slc8a1b (ENSKMAG00000016559)	MAP4K3 (ENSKMAG00000016374)	ENSKMAG00000016287	slc17a5 (ENSKMAG00000016240)
Turquoise killifish	MODERN SPECIES	1612	ENSNFUG00015003198	CCDC104 (ENSNFUG00015003213)	CABZ01031887.1 (ENSNFUG00015003227)	PNPT1 (ENSNFUG00015003263)	CCDC88A (ENSNFUG00015003339)	CAMK2G (ENSNFUG00015003704)	ENSNFUG00015005036	SYNPO2L (ENSNFUG00015005042)	MYOZ1 (ENSNFUG00015005058)	HHAT (ENSNFUG00015005067)	kcnh1a (ENSNFUG00015005129)	MRP63 (ENSNFUG00015005293)	cyp3c4 (ENSNFUG00015005316)	DESI2 (ENSNFUG00015005397)	MTRF1L (ENSNFUG00015005418) #21	FBXO5 (ENSNFUG00015005426) #22	vip (ENSNFUG00015005435) #23	ANAPC1 (ENSNFUG00015005485)	ENSNFUG00015005634	ENSNFUG00015005640	SLC16A12 (ENSNFUG00015005645)	PANK1A (ENSNFUG00015005655)	Nfu_g_1_002855 (ENSNFUG00015005680)	NPHP1 (ENSNFUG00015005710)	ENSNFUG00015005763	MAL (ENSNFUG00015005764)	malb (ENSNFUG00015005768)	MRPS5 (ENSNFUG00015005770)	ENSNFUG00015005780	ENSNFUG00015005783	ENSNFUG00015005786
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Pomacentridae	ANCESTRAL SPECIES	115														ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b	ENSGT01050000244827.E
Pomacentridae_A	ANCESTRAL SPECIES	104							ENSGT00940000155345.q	ENSGT00940000157597	ENSGT00940000161234	ENSGT00390000016551	ENSGT00530000063410.a.q.a	ENSGT00940000153464.B.z.b	ENSGT00950000182958.b.a.b.m.a.a.a	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b	ENSGT01050000244827.E
Amphiprion	ANCESTRAL SPECIES	128								ENSGT00940000157597	ENSGT00940000161234	ENSGT00390000016551	ENSGT00530000063410.a.q.a	ENSGT00940000153464.B.z.b	ENSGT00950000182958.b.a.b.m.a.a.a	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b	ENSGT01050000244827.E
Clown anemonefish	MODERN SPECIES	227													ENSAOCG00000009660	desi2 (ENSAOCG00000009685)	MTRF1L (ENSAOCG00000009709) #21	ENSAOCG00000002167 #22	vip (ENSAOCG00000009757) #23
Orange clownfish	MODERN SPECIES	12								ENSAPEG00000023573	EHBP1 (ENSAPEG00000023607)	otx1 (ENSAPEG00000023664)	ENSAPEG00000023677	MDH1 (ENSAPEG00000023690)	ugp2b (ENSAPEG00000023717)	desi2 (ENSAPEG00000023757)	MTRF1L (ENSAPEG00000023778) #21	fbxo5 (ENSAPEG00000023803) #22	vip (ENSAPEG00000023817) #23	ENSAPEG00000000317	ANAPC1 (ENSAPEG00000000359)	ENSAPEG00000000536	ENSAPEG00000000568	ENSAPEG00000000621	pank1a (ENSAPEG00000000663)	zgc:65997 (ENSAPEG00000000758)	nphp1 (ENSAPEG00000000781)	ENSAPEG00000000837	malb (ENSAPEG00000000848)	mrps5 (ENSAPEG00000000853)	slc8a1b (ENSAPEG00000000914)	ENSAPEG00000000981	ENSAPEG00000000987
Spiny chromis	MODERN SPECIES	66								b3gnt2b (ENSAPOG00000005146)	EHBP1 (ENSAPOG00000005245)	otx1 (ENSAPOG00000005278)	WDPCP (ENSAPOG00000005298)	MDH1 (ENSAPOG00000005335)	ugp2b (ENSAPOG00000005410)	desi2 (ENSAPOG00000005457)	MTRF1L (ENSAPOG00000005515) #21	fbxo5 (ENSAPOG00000005525) #22	vip (ENSAPOG00000005552) #23	ANAPC1 (ENSAPOG00000005760)	ENSAPOG00000005801	ENSAPOG00000005837	zgc:65997 (ENSAPOG00000005863)	ENSAPOG00000005883	ENSAPOG00000005898	malb (ENSAPOG00000006001)	mrps5 (ENSAPOG00000006057)
Bicolor damselfish	MODERN SPECIES	1698														desi2 (ENSSPAG00000019736)	MTRF1L (ENSSPAG00000019725) #21	fbxo5 (ENSSPAG00000019720) #22	vip (ENSSPAG00000019578) #23	ANAPC1 (ENSSPAG00000019419)
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.l	ENSGT00940000170782	ENSGT00950000182958.b.a.b.k	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.k.a.b.a.b	ENSGT00950000182958.b.a.b.k.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.l	ENSGT00950000182958.b.a.b.k.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.l	ENSGT00940000170782	ENSGT00950000182958.b.a.b.k.a.a	ENSGT00950000182958.b.a.b.k.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.l	ENSGT00950000182958.b.a.b.k.a.a	ENSGT00950000182958.b.a.b.k.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b.l	ENSGT00950000182958.b.a.b.k.a.a	ENSGT00950000182958.b.a.b.k.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Eastern happy	MODERN SPECIES	4	ENSACLG00000025204	ENSACLG00000025223	SYNPO2L (ENSACLG00000025230)	MYOZ1 (ENSACLG00000025237)	hhat (ENSACLG00000025249)	kcnh1a (ENSACLG00000025280)	mrpl57 (ENSACLG00000025308)	ENSACLG00000025328	ENSACLG00000025446	ENSACLG00000025460	ENSACLG00000025464	ENSACLG00000025483	ENSACLG00000025500	desi2 (ENSACLG00000025520)	MTRF1L (ENSACLG00000025524) #21	fbxo5 (ENSACLG00000025555) #22	vip (ENSACLG00000025564) #23	ANAPC1 (ENSACLG00000025580)	SLC16A12 (ENSACLG00000025645)	pank1a (ENSACLG00000025674)	zgc:65997 (ENSACLG00000025686)	nphp1 (ENSACLG00000025700)	ENSACLG00000025741	malb (ENSACLG00000025748)	mrps5 (ENSACLG00000025759)	slc8a1b (ENSACLG00000025808)	ENSACLG00000025840	MAP4K3 (ENSACLG00000025938)	ENSACLG00000026002	slc17a5 (ENSACLG00000026026)	EEF1A1 (ENSACLG00000026047)
Zebra mbuna	MODERN SPECIES	35										mrpl57 (ENSMZEG00005019837)	ENSMZEG00005019844	ENSMZEG00005019860	ENSMZEG00005019887	desi2 (ENSMZEG00005019892)	MTRF1L (ENSMZEG00005019895) #21	fbxo5 (ENSMZEG00005019902) #22	vip (ENSMZEG00005019906) #23	ANAPC1 (ENSMZEG00005019920)	ENSMZEG00005019965	SLC16A12 (ENSMZEG00005019969)	pank1a (ENSMZEG00005019974)	zgc:65997 (ENSMZEG00005019989)	nphp1 (ENSMZEG00005019994)	ENSMZEG00005020004	malb (ENSMZEG00005020009)	mrps5 (ENSMZEG00005020014)
Burton s mouthbrooder	MODERN SPECIES	578												ENSHBUG00000006217	ENSHBUG00000006227	ENSHBUG00000006274	MTRF1L (ENSHBUG00000006300) #21	fbxo5 (ENSHBUG00000006309) #22	vip (ENSHBUG00000006319) #23	ANAPC1 (ENSHBUG00000006512)	ENSHBUG00000006554	SLC16A12 (ENSHBUG00000006557)	pank1a (ENSHBUG00000006594)	zgc:65997 (ENSHBUG00000006615)	nphp1 (ENSHBUG00000006627)	ENSHBUG00000006640	malb (ENSHBUG00000006648)	mrps5 (ENSHBUG00000006687)	ENSHBUG00000006695
Lyretail cichlid	MODERN SPECIES	295	ppp4r3b (ENSNBRG00000012734)	PNPT1 (ENSNBRG00000012517)	CCDC88A (ENSNBRG00000012428)	ENSNBRG00000012308	ENSNBRG00000012210	SYNPO2L (ENSNBRG00000012197)	ENSNBRG00000012190	hhat (ENSNBRG00000012162)	kcnh1a (ENSNBRG00000012133)	mrpl57 (ENSNBRG00000012130)	ENSNBRG00000012065	ENSNBRG00000012050	ENSNBRG00000012011	ENSNBRG00000011985	MTRF1L (ENSNBRG00000011974) #21	fbxo5 (ENSNBRG00000011953) #22	ANAPC1 (ENSNBRG00000011846)	SLC16A12 (ENSNBRG00000011828)	pank1a (ENSNBRG00000011795)	zgc:65997 (ENSNBRG00000011774)	nphp1 (ENSNBRG00000011708)	ENSNBRG00000011676	malb (ENSNBRG00000011605)	mrps5 (ENSNBRG00000011584)	slc8a1b (ENSNBRG00000011545)	ENSNBRG00000011526	MAP4K3 (ENSNBRG00000011204)	slc17a5 (ENSNBRG00000011078)	ENSNBRG00000011060	ENSNBRG00000011042	ddx43 (ENSNBRG00000010942)
Nile tilapia	MODERN SPECIES	4	PNPT1 (ENSONIG00000000983)	CCDC88A (ENSONIG00000001005)	ENSONIG00000001018	ENSONIG00000036726	ENSONIG00000033842	SYNPO2L (ENSONIG00000042472)	MYOZ1 (ENSONIG00000001028)	hhat (ENSONIG00000001029)	kcnh1a (ENSONIG00000001033)	mrpl57 (ENSONIG00000020728)	ENSONIG00000001039	ENSONIG00000001065	ENSONIG00000027216	desi2 (ENSONIG00000039428)	MTRF1L (ENSONIG00000001104) #21	fbxo5 (ENSONIG00000001110) #22	vip (ENSONIG00000001111) #23	ANAPC1 (ENSONIG00000001115)	ENSONIG00000028050	ENSONIG00000041495	SLC16A12 (ENSONIG00000029210)	pank1a (ENSONIG00000001137)	zgc:65997 (ENSONIG00000001142)	nphp1 (ENSONIG00000029772)	ENSONIG00000001144	malb (ENSONIG00000034164)	mrps5 (ENSONIG00000001150)	slc8a1b (ENSONIG00000001153)	ENSONIG00000001165	MAP4K3 (ENSONIG00000001166)	ENSONIG00000001180
Midas cichlid	MODERN SPECIES	230	ppp4r3b (ENSACIG00000010058)	PNPT1 (ENSACIG00000010140)	CCDC88A (ENSACIG00000010202)	ENSACIG00000010329	ENSACIG00000010806	SYNPO2L (ENSACIG00000010819)	MYOZ1 (ENSACIG00000010857)	hhat (ENSACIG00000010893)	KCNH1 (ENSACIG00000010925)	mrpl57 (ENSACIG00000010952)	ENSACIG00000010969	ENSACIG00000010994	ENSACIG00000011028	desi2 (ENSACIG00000011075)	MTRF1L (ENSACIG00000011084) #21	fbxo5 (ENSACIG00000011105) #22	vip (ENSACIG00000011138) #23	ANAPC1 (ENSACIG00000011160)	ENSACIG00000011251	SLC16A12 (ENSACIG00000011260)	ENSACIG00000011283	zgc:65997 (ENSACIG00000011311)	nphp1 (ENSACIG00000011330)	ENSACIG00000011449	malb (ENSACIG00000011521)	mrps5 (ENSACIG00000011594)	slc8a1b (ENSACIG00000011645)	ENSACIG00000011677	MAP4K3 (ENSACIG00000011728)	slc17a5 (ENSACIG00000011825)	ENSACIG00000011849
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT01030000237580	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT01030000237580	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT01030000237580	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b
Climbing perch	MODERN SPECIES	6	ENSATEG00000011266	ENSATEG00000011549	ENSATEG00000027560	ENSATEG00000011664	ENSATEG00000011677	ENSATEG00000011684	ENSATEG00000011708	ENSATEG00000011738	ENSATEG00000011752	ENSATEG00000011760	ENSATEG00000011806	ENSATEG00000011817	ENSATEG00000011836	ENSATEG00000028176	ENSATEG00000011872 #21	fbxo5 (ENSATEG00000011883) #22	ENSATEG00000011889 #23	ENSATEG00000011919	ENSATEG00000012115	ENSATEG00000025766	ENSATEG00000012155	zgc:65997 (ENSATEG00000012188)	nphp1 (ENSATEG00000012206)	ENSATEG00000012217	ENSATEG00000026083	malb (ENSATEG00000012241)	mrps5 (ENSATEG00000012264)	slc8a1b (ENSATEG00000012293)	ENSATEG00000028108	ENSATEG00000027204	ENSATEG00000012370
Siamese fighting fish	MODERN SPECIES	6	PLD5 (ENSBSLG00000025219)	cfap36 (ENSBSLG00000025220)	ppp4r3b (ENSBSLG00000025239)	PNPT1 (ENSBSLG00000025294)	CCDC88A (ENSBSLG00000025644)	ENSBSLG00000025894	ENSBSLG00000025904	SYNPO2L (ENSBSLG00000025949)	ENSBSLG00000025982	hhat (ENSBSLG00000026006)	kcnh1a (ENSBSLG00000026028)	mrpl57 (ENSBSLG00000026049)	cyp3c3 (ENSBSLG00000026068)	desi2 (ENSBSLG00000026114)	MTRF1L (ENSBSLG00000026122) #21	fbxo5 (ENSBSLG00000026126) #22	vip (ENSBSLG00000026130) #23	ANAPC1 (ENSBSLG00000026182)	ENSBSLG00000026357	SLC16A12 (ENSBSLG00000026359)	pank1a (ENSBSLG00000026363)	nphp1 (ENSBSLG00000026373)	zgc:65997 (ENSBSLG00000026382)	malb (ENSBSLG00000013171)	mrps5 (ENSBSLG00000013218)	slc8a1b (ENSBSLG00000013391)	ENSBSLG00000014213	MAP4K3 (ENSBSLG00000014437)	ENSBSLG00000015485	slc17a5 (ENSBSLG00000015518)	ddx43 (ENSBSLG00000015799)
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000021941	CFAP36 (ENSMAMG00000021946)	ENSMAMG00000021949	PNPT1 (ENSMAMG00000021954)	ENSMAMG00000021965	ENSMAMG00000021979	ENSMAMG00000027241	ENSMAMG00000024687	ENSMAMG00000021986	ENSMAMG00000021988	ENSMAMG00000021993	ENSMAMG00000021998	ENSMAMG00000022004	ENSMAMG00000022012	ENSMAMG00000022015 #21	fbxo5 (ENSMAMG00000022019) #22	ENSMAMG00000022023 #23	ENSMAMG00000022030	ENSMAMG00000022038	ENSMAMG00000022039	ENSMAMG00000022049	zgc:65997 (ENSMAMG00000022058)	nphp1 (ENSMAMG00000022063)	ENSMAMG00000022068	malb (ENSMAMG00000022072)	mrps5 (ENSMAMG00000022074)	slc8a1b (ENSMAMG00000022080)	ENSMAMG00000022090	ENSMAMG00000022108	slc17a5 (ENSMAMG00000022121)	EEF1A1 (ENSMAMG00000004552)
Carangaria	ANCESTRAL SPECIES	19	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b	ENSGT00940000174058
Seriola	ANCESTRAL SPECIES	17	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000166291	ENSGT00950000183029.B.j.c.b
Greater amberjack	MODERN SPECIES	72	ENSSDUG00000018475	cfap36 (ENSSDUG00000018494)	ppp4r3b (ENSSDUG00000018563)	PNPT1 (ENSSDUG00000018584)	CCDC88A (ENSSDUG00000018649)	ENSSDUG00000018986	ENSSDUG00000019023	SYNPO2L (ENSSDUG00000019038)	MYOZ1 (ENSSDUG00000019127)	hhat (ENSSDUG00000019222)	kcnh1a (ENSSDUG00000019253)	mrpl57 (ENSSDUG00000019348)	cyp3c4 (ENSSDUG00000019359)	desi2 (ENSSDUG00000019377)	MTRF1L (ENSSDUG00000019392) #21	fbxo5 (ENSSDUG00000019409) #22	vip (ENSSDUG00000019423) #23	ANAPC1 (ENSSDUG00000019457)	ENSSDUG00000019627	ENSSDUG00000019633	SLC16A12 (ENSSDUG00000019637)	pank1a (ENSSDUG00000019651)	zgc:65997 (ENSSDUG00000019677)	nphp1 (ENSSDUG00000019684)	MAL (ENSSDUG00000019705)	malb (ENSSDUG00000019726)	mrps5 (ENSSDUG00000019792)	slc8a1b (ENSSDUG00000019868)	ENSSDUG00000019898	MAP4K3 (ENSSDUG00000019925)	slc17a5 (ENSSDUG00000020030)
Yellowtail amberjack	MODERN SPECIES	3235	ENSSLDG00000023279	cfap36 (ENSSLDG00000023299)	ppp4r3b (ENSSLDG00000023333)	PNPT1 (ENSSLDG00000023385)	CCDC88A (ENSSLDG00000023493)	ENSSLDG00000023769	ENSSLDG00000023918	SYNPO2L (ENSSLDG00000023921)	MYOZ1 (ENSSLDG00000023930)	hhat (ENSSLDG00000023935)	kcnh1a (ENSSLDG00000023948)	mrpl57 (ENSSLDG00000023968)	cyp3c4 (ENSSLDG00000023977)	desi2 (ENSSLDG00000024008)	MTRF1L (ENSSLDG00000024033) #21	fbxo5 (ENSSLDG00000024046) #22	vip (ENSSLDG00000024058) #23	ENSSLDG00000024072	ANAPC1 (ENSSLDG00000024082)
Barramundi perch	MODERN SPECIES	341									ENSLCAG00010019737	hhat (ENSLCAG00010019740)	kcnh1a (ENSLCAG00010019766)	mrpl57 (ENSLCAG00010019820)	cyp3c4 (ENSLCAG00010019832)	desi2 (ENSLCAG00010019838)	MTRF1L (ENSLCAG00010019841) #21	fbxo5 (ENSLCAG00010019844) #22	vip (ENSLCAG00010019851) #23	ANAPC1 (ENSLCAG00010019861)	ENSLCAG00010019877	SLC16A12 (ENSLCAG00010019878)	pank1a (ENSLCAG00010019886)	zgc:65997 (ENSLCAG00010019902)	nphp1 (ENSLCAG00010019919)	MAL (ENSLCAG00010019955)	malb (ENSLCAG00010019960)	mrps5 (ENSLCAG00010019965)
Pleuronectoidei	ANCESTRAL SPECIES	60						ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT01030000237580	ENSGT00940000166291
Tongue sole	MODERN SPECIES	3	RIMS1 (ENSCSEG00000002334)	ENSCSEG00000002433	asrgl1 (ENSCSEG00000002435)	ENSCSEG00000002446	CAMK2G (ENSCSEG00000002455)	ENSCSEG00000002590	SYNPO2L (ENSCSEG00000002595)	MYOZ1 (ENSCSEG00000002601)	hhat (ENSCSEG00000002610)	KCNH1 (ENSCSEG00000002618)	mrpl57 (ENSCSEG00000002654)	ENSCSEG00000002662	ENSCSEG00000002669	desi2 (ENSCSEG00000002678)	MTRF1L (ENSCSEG00000002684) #21	fbxo5 (ENSCSEG00000002689) #22	vip (ENSCSEG00000002697) #23	ANAPC1 (ENSCSEG00000002709)	ENSCSEG00000002735	ENSCSEG00000002742	ENSCSEG00000002746	HTR7 (ENSCSEG00000002759)	ARFGEF3 (ENSCSEG00000002766)	GPR26 (ENSCSEG00000002783)	nkx1.2la (ENSCSEG00000002788)	EGR2 (ENSCSEG00000002793)	adob (ENSCSEG00000002796)	ZNF365 (ENSCSEG00000002804)	ENSCSEG00000002806	ENSCSEG00000002807	ENSCSEG00000002812
Turbot	MODERN SPECIES	6	ENSSMAG00000001052	ENSSMAG00000001041	cyp17a1 (ENSSMAG00000001013)	ENSSMAG00000001004	nt5c2a (ENSSMAG00000000954)	ENSSMAG00000032721	ENSSMAG00000000880	fgf8a (ENSSMAG00000034015)	ENSSMAG00000019969	ENSSMAG00000019960	ENSSMAG00000037166	ENSSMAG00000019950	slc2a15a (ENSSMAG00000019977)	ENSSMAG00000019908	ENSSMAG00000019886 #21	fbxo5 (ENSSMAG00000019877) #22	vip (ENSSMAG00000033181) #23	ENSSMAG00000019782	ENSSMAG00000019747	ENSSMAG00000019790	ENSSMAG00000019724	zgc:65997 (ENSSMAG00000019711)	nphp1 (ENSSMAG00000019664)	ENSSMAG00000019652	malb (ENSSMAG00000022037)	mrps5 (ENSSMAG00000019624)	slc8a1b (ENSSMAG00000019611)	ENSSMAG00000019604	ENSSMAG00000019378	ENSSMAG00000030081	slc17a5 (ENSSMAG00000019352)
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Fugu	MODERN SPECIES	16	ENSTRUG00000026094	ENSTRUG00000006889	cfap36 (ENSTRUG00000006652)	ENSTRUG00000006119	PNPT1 (ENSTRUG00000005495)	CCDC88A (ENSTRUG00000004190)	CAMK2G (ENSTRUG00000003332)	SYNPO2L (ENSTRUG00000024738)	MYOZ1 (ENSTRUG00000002720)	hhat (ENSTRUG00000002100)	kcnh1a (ENSTRUG00000001725)	mrpl57 (ENSTRUG00000001715)	cyp3c4 (ENSTRUG00000001326)	desi2 (ENSTRUG00000001316)	MTRF1L (ENSTRUG00000001172) #21	fbxo5 (ENSTRUG00000023972) #22	vip (ENSTRUG00000001139) #23	ANAPC1 (ENSTRUG00000001055)	ENSTRUG00000027086	SLC16A12 (ENSTRUG00000027543)	pank1a (ENSTRUG00000026863)	zgc:65997 (ENSTRUG00000032567)	nphp1 (ENSTRUG00000026367)	ENSTRUG00000026056	malb (ENSTRUG00000031016)	mrps5 (ENSTRUG00000030917)	slc8a1b (ENSTRUG00000013345)	MAP4K3 (ENSTRUG00000013107)	ENSTRUG00000026938	slc17a5 (ENSTRUG00000013027)	eef1a1b (ENSTRUG00000012893)
Tetraodon	MODERN SPECIES	9	SRBD1 (ENSTNIG00000007464)	ENSTNIG00000007463	ENSTNIG00000007462	cfap36 (ENSTNIG00000000410)	ppp4r3b (ENSTNIG00000007461)	PNPT1 (ENSTNIG00000007460)	CCDC88A (ENSTNIG00000007459)	CAMK2G (ENSTNIG00000007458)	SYNPO2L (ENSTNIG00000007457)	MYOZ1 (ENSTNIG00000007456)	hhat (ENSTNIG00000007455)	kcnh1a (ENSTNIG00000007454)	cyp3c4 (ENSTNIG00000007453)	desi2 (ENSTNIG00000007452)	MTRF1L (ENSTNIG00000007451) #21	fbxo5 (ENSTNIG00000007450) #22	vip (ENSTNIG00000007449) #23	ANAPC1 (ENSTNIG00000007448)	SLC16A12 (ENSTNIG00000007447)	pank1a (ENSTNIG00000007446)	zgc:65997 (ENSTNIG00000007445)	nphp1 (ENSTNIG00000007444)	ENSTNIG00000007443	ENSTNIG00000009889	slc8a1b (ENSTNIG00000009816)	ENSTNIG00000009817	MAP4K3 (ENSTNIG00000009818)	ENSTNIG00000009819	slc17a5 (ENSTNIG00000009820)	eef1a1b (ENSTNIG00000009821)	ddx43 (ENSTNIG00000009822)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1911															ENSLBEG00000005234 #21	fbxo5 (ENSLBEG00000005219) #22	ENSLBEG00000005194 #23
Ballan wrasse	MODERN SPECIES	476			SYNPO2L (ENSLBEG00000020254)	ENSLBEG00000020284	hhat (ENSLBEG00000020326)	kcnh1a (ENSLBEG00000020433)	mrpl57 (ENSLBEG00000020535)	ENSLBEG00000020562	ENSLBEG00000020605	ENSLBEG00000020647	ENSLBEG00000020757	ENSLBEG00000020781	ENSLBEG00000020822	desi2 (ENSLBEG00000020845)	MTRF1L (ENSLBEG00000020890) #21	fbxo5 (ENSLBEG00000020907) #22	vip (ENSLBEG00000020926) #23	ANAPC1 (ENSLBEG00000020973)
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
European seabass	MODERN SPECIES	1	ENSDLAG00005005517	CFAP36 (ENSDLAG00005005551)	ENSDLAG00005005614	PNPT1 (ENSDLAG00005005895)	ENSDLAG00005007268	ENSDLAG00005031455	ENSDLAG00005008089	ENSDLAG00005008186	ENSDLAG00005008177	ENSDLAG00005008196	ENSDLAG00005008216	ENSDLAG00005008304	ENSDLAG00005008288	ENSDLAG00005034593	ENSDLAG00005031636 #21	fbxo5 (ENSDLAG00005008654) #22	ENSDLAG00005008664 #23	ENSDLAG00005008715	ENSDLAG00005034799	ENSDLAG00005009216	ENSDLAG00005009223	zgc:65997 (ENSDLAG00005026774)	nphp1 (ENSDLAG00005009281)	ENSDLAG00005030126	malb (ENSDLAG00005033757)	mrps5 (ENSDLAG00005009328)	ENSDLAG00005029134	ENSDLAG00005009562	slc8a1b (ENSDLAG00005009574)	ENSDLAG00005009595	ENSDLAG00005009669
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005008102	CFAP36 (ENSLCRG00005008106)	ppp4r3b (ENSLCRG00005008117)	PNPT1 (ENSLCRG00005008174)	ENSLCRG00005008464	ENSLCRG00005008524	ENSLCRG00005008842	SYNPO2L (ENSLCRG00005008846)	ENSLCRG00005008847	hhat (ENSLCRG00005008848)	KCNH1 (ENSLCRG00005008850)	mrpl57 (ENSLCRG00005009347)	ENSLCRG00005009350	desi2 (ENSLCRG00005009787)	MTRF1L (ENSLCRG00005009791) #21	fbxo5 (ENSLCRG00005009794) #22	vip (ENSLCRG00005009797) #23	ANAPC1 (ENSLCRG00005009807)	ENSLCRG00005010726	slc16a12b (ENSLCRG00005010727)	pank1a (ENSLCRG00005010728)	zgc:65997 (ENSLCRG00005010731)	nphp1 (ENSLCRG00005010734)	MAL (ENSLCRG00005010735)	malb (ENSLCRG00005010736)	mrps5 (ENSLCRG00005010739)	slc8a1b (ENSLCRG00005010818)	ENSLCRG00005010828	EML6 (ENSLCRG00005010831)	ENSLCRG00005010853	rbm45 (ENSLCRG00005010854)
Gilthead seabream	MODERN SPECIES	6	CFAP36 (ENSSAUG00010022899)	ppp4r3b (ENSSAUG00010022852)	PNPT1 (ENSSAUG00010022480)	CCDC88A (ENSSAUG00010022375)	ENSSAUG00010016786	ENSSAUG00010016730	SYNPO2L (ENSSAUG00010016728)	MYOZ1 (ENSSAUG00010016727)	hhat (ENSSAUG00010016724)	kcnh1a (ENSSAUG00010016707)	mrpl57 (ENSSAUG00010016702)	ENSSAUG00010016700	cyp3c4 (ENSSAUG00010016331)	desi2 (ENSSAUG00010016325)	MTRF1L (ENSSAUG00010016324) #21	fbxo5 (ENSSAUG00010016323) #22	vip (ENSSAUG00010016320) #23	ANAPC1 (ENSSAUG00010014461)	ENSSAUG00010014416	SLC16A12 (ENSSAUG00010014414)	pank1a (ENSSAUG00010014393)	zgc:65997 (ENSSAUG00010014391)	nphp1 (ENSSAUG00010014386)	MAL (ENSSAUG00010014381)	malb (ENSSAUG00010014376)	pcca (ENSSAUG00010014231)	ENSSAUG00010014221	vps8 (ENSSAUG00010013756)	calhm2.1 (ENSSAUG00010013739)	ncapd3 (ENSSAUG00010013471)	ENSSAUG00010014115
Perciformes	ANCESTRAL SPECIES	17	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT00940000163420	ENSGT00940000166291
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171	ENSGT00950000182958.b.a.b	ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000177019	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701	ENSGT00940000154987.i.a	ENSGT00940000154987.i.b.a.a	ENSGT00390000001878	ENSGT00940000155129.A	ENSGT00530000063557.b	ENSGT00940000155483.f	ENSGT01030000237580	ENSGT00940000166291
Pike perch	MODERN SPECIES	30	CFAP36 (ENSSLUG00000012351)	ppp4r3b (ENSSLUG00000012302)	PNPT1 (ENSSLUG00000011705)	CCDC88A (ENSSLUG00000011599)	ENSSLUG00000011513	ENSSLUG00000011462	SYNPO2L (ENSSLUG00000011442)	ENSSLUG00000011432	hhat (ENSSLUG00000011419)	kcnh1a (ENSSLUG00000011346)	ENSSLUG00000011338	mrpl57 (ENSSLUG00000011337)	ENSSLUG00000010953	desi2 (ENSSLUG00000010920)	MTRF1L (ENSSLUG00000010914) #21	fbxo5 (ENSSLUG00000010911) #22	vip (ENSSLUG00000010901) #23	ANAPC1 (ENSSLUG00000010873)	ENSSLUG00000010851	SLC16A12 (ENSSLUG00000010845)	pank1a (ENSSLUG00000010829)	zgc:65997 (ENSSLUG00000010823)	nphp1 (ENSSLUG00000010797)	ENSSLUG00000010762	ENSSLUG00000010750	malb (ENSSLUG00000010745)	mrps5 (ENSSLUG00000010736)	slc8a1b (ENSSLUG00000010691)	ENSSLUG00000010676	MAP4K3 (ENSSLUG00000009726)	slc17a5 (ENSSLUG00000008576)
Cottioidei	ANCESTRAL SPECIES	100														ENSGT00730000111005	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00940000156169.a.b	ENSGT00940000157373.l	ENSGT00940000165449	ENSGT00390000007701
Stickleback	MODERN SPECIES	163		ENSGACG00000001372	ENSGACG00000001371	apmap (ENSGACG00000001354)	CST7 (ENSGACG00000001353)	elovl6l (ENSGACG00000001349)	ENSGACG00000001345	ENSGACG00000001338	nfkb2 (ENSGACG00000001323)	glud1a (ENSGACG00000001316)	ENSGACG00000001314	ENSGACG00000001309	ENSGACG00000001307	desi2 (ENSGACG00000001304)	MTRF1L (ENSGACG00000001302) #21	ENSGACG00000001299 #22	ENSGACG00000001298 #23	ANAPC1 (ENSGACG00000001281)
Lumpfish	MODERN SPECIES	6	cnrip1b (ENSCLMG00005009450)	ENSCLMG00005009230	ddx43 (ENSCLMG00005009228)	ENSCLMG00005009227	ENSCLMG00005009226	ENSCLMG00005009225	ENSCLMG00005008931	slc17a5 (ENSCLMG00005008183)	ENSCLMG00005002478	ENSCLMG00005002444	slc8a1b (ENSCLMG00005002404)	mrps5 (ENSCLMG00005002398)	MAL (ENSCLMG00005002396)	desi2 (ENSCLMG00005002394)	MTRF1L (ENSCLMG00005002392) #21	fbxo5 (ENSCLMG00005002390) #22	vip (ENSCLMG00005002389) #23	ENSCLMG00005002348	SLC16A12 (ENSCLMG00005002346)	ENSCLMG00005002344	zgc:65997 (ENSCLMG00005002342)	ENSCLMG00005002339	ENSCLMG00005002332	ENSCLMG00005002331	ENSCLMG00005002330	PSD (ENSCLMG00005002327)	GLUD2 (ENSCLMG00005002290)	ENSCLMG00005002282	sncga (ENSCLMG00005002281)	CST7 (ENSCLMG00005002279)	apmap (ENSCLMG00005002277)
Otomorpha	ANCESTRAL SPECIES	110	ENSGT00950000183133.c.a	ENSGT00950000183133.c.b	ENSGT00390000003349	ENSGT00940000154632	ENSGT00940000158015.k.a	ENSGT00950000183000.d	ENSGT00940000154784.D.b.c.b	ENSGT00940000154784.D.a.a.b.a.b	ENSGT00940000158672.c	ENSGT00390000001121	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00390000003178	ENSGT00940000161693	ENSGT00940000159084	ENSGT00940000159934	ENSGT00940000165356	ENSGT00940000160678.b.d.a	ENSGT00390000011103.A.q	ENSGT00940000154864.a.b	ENSGT00940000155564.m	ENSGT00940000156568.r.a	ENSGT00940000177131	ENSGT00950000183166.a.a.a.b.f	ENSGT00940000157820.a.b
Otophysi	ANCESTRAL SPECIES		ENSGT00390000011908	ENSGT01050000244838.C.b	ENSGT00390000014256	ENSGT00530000064150	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000158288	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00390000003178	ENSGT00940000161693	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00940000157396	ENSGT01030000234543.E	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.a.a.a
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00390000011908	ENSGT01050000244838.C.b	ENSGT00390000014256	ENSGT00530000064150	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000158288	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00940000157396	ENSGT01030000234543.E	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.a.a.a
Channel catfish	MODERN SPECIES	22	ENSIPUG00000018959	ENSIPUG00000018947	cyt (ENSIPUG00000018929)	si:dkey-76k16.6 (ENSIPUG00000018921)	ENSIPUG00000018917	glyat (ENSIPUG00000018900)	spred2b (ENSIPUG00000018860)	ENSIPUG00000018807	ENSIPUG00000018796	ENSIPUG00000018776	tsnax (ENSIPUG00000018757)	ENSIPUG00000018751	msh6 (ENSIPUG00000018740)	FBXO11 (ENSIPUG00000018693)	ENSIPUG00000018679	fbxo5 (ENSIPUG00000018666) #22	MTRF1L (ENSIPUG00000018643) #21	ENSIPUG00000018633	VIP (ENSIPUG00000018625) #23	ANAPC1 (ENSIPUG00000018408)	BCL2L11 (ENSIPUG00000018384)	ENSIPUG00000018369	lhcgr (ENSIPUG00000018354)	mertk (ENSIPUG00000018329)	tmem87b (ENSIPUG00000018305)	fbln7 (ENSIPUG00000018282)	ENSIPUG00000018254	ENSIPUG00000018230	itga9 (ENSIPUG00000018145)	golga4 (ENSIPUG00000018043)	ENSIPUG00000018022
Characiphysae_b	ANCESTRAL SPECIES	69	ENSGT00390000011908	ENSGT01050000244838.C.b	ENSGT00390000014256	ENSGT00530000064150	ENSGT00940000168267	ENSGT00940000161285.a	ENSGT00940000158288	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00940000157396	ENSGT01030000234543.E	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.a.a.a
Characoidei	ANCESTRAL SPECIES	180								ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000157084.e.b	ENSGT00390000010094.b.a	ENSGT00390000010094.b.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000161693	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00940000157396	ENSGT01030000234543.E	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.a.a.a
Red-bellied piranha	MODERN SPECIES	85	rnf220a (ENSPNAG00000001027)	tmem53 (ENSPNAG00000008465)	opn4.1 (ENSPNAG00000005448)	ENSPNAG00000001035	ENSPNAG00000001043	ENSPNAG00000008509	myl12.2 (ENSPNAG00000008522)	ccr9a (ENSPNAG00000008529)	zgc:136930 (ENSPNAG00000008546)	fgfr2 (ENSPNAG00000008635)	ATE1 (ENSPNAG00000008723)	TMEM63B (ENSPNAG00000001203)	ENSPNAG00000008835	slc29a1a (ENSPNAG00000008874)	MTRF1L (ENSPNAG00000008890) #21	fbxo5 (ENSPNAG00000008894) #22	vip (ENSPNAG00000005072) #23	ANAPC1 (ENSPNAG00000008965)	ENSPNAG00000005837	ACOXL (ENSPNAG00000009082)	lhcgr (ENSPNAG00000009197)	MERTK (ENSPNAG00000009248)	TMEM87B (ENSPNAG00000009275)	ENSPNAG00000009313	ZC3H6 (ENSPNAG00000009331)	ENSPNAG00000009386	itga9 (ENSPNAG00000001320)	GOLGA4 (ENSPNAG00000009695)	KCNK12 (ENSPNAG00000009732)
Mexicana tetra	MODERN SPECIES	17	lgals3a (ENSAMXG00000041645)	gmfb (ENSAMXG00000040851)	cnih1 (ENSAMXG00000030953)	cdkn3 (ENSAMXG00000038739)	ENSAMXG00000034572	sos2 (ENSAMXG00000021530)	l2hgdh (ENSAMXG00000038535)	mrpl2 (ENSAMXG00000021532)	ENSAMXG00000032735	ATE1 (ENSAMXG00000036766)	ENSAMXG00000044047	fgfr2 (ENSAMXG00000003805)	TMEM63B (ENSAMXG00000006674)	ENSAMXG00000034503	MTRF1L (ENSAMXG00000003666) #21	fbxo5 (ENSAMXG00000003593) #22	vip (ENSAMXG00000003550) #23	ANAPC1 (ENSAMXG00000003464)	ENSAMXG00000040108	ACOXL (ENSAMXG00000003334)	lhcgr (ENSAMXG00000034302)	ENSAMXG00000035726	MERTK (ENSAMXG00000003134)	TMEM87B (ENSAMXG00000003116)	ENSAMXG00000036402	ZC3H6 (ENSAMXG00000013613)	ENSAMXG00000013589	itga9 (ENSAMXG00000013573)	GOLGA4 (ENSAMXG00000013535)	KCNK12 (ENSAMXG00000013483)	ENSAMXG00000037738
Electric eel	MODERN SPECIES	19	klhl31 (ENSEEEG00000021332)	gclc (ENSEEEG00000021342)	elovl5 (ENSEEEG00000021361)	fbxo9 (ENSEEEG00000021367)	ARFGEF3 (ENSEEEG00000021384)	cox20 (ENSEEEG00000021388)	lhb (ENSEEEG00000021389)	PLPP4 (ENSEEEG00000021391)	wdr11 (ENSEEEG00000021398)	fgfr2 (ENSEEEG00000021417)	ATE1 (ENSEEEG00000021549)	TMEM63B (ENSEEEG00000021561)	ENSEEEG00000021655	slc29a1a (ENSEEEG00000021666)	MTRF1L (ENSEEEG00000021688) #21	fbxo5 (ENSEEEG00000021689) #22	vip (ENSEEEG00000021696) #23	ANAPC1 (ENSEEEG00000021720)	ENSEEEG00000021764	ACOXL (ENSEEEG00000021767)	lhcgr (ENSEEEG00000021774)	MERTK (ENSEEEG00000021778)	ENSEEEG00000021780	ENSEEEG00000021782	ENSEEEG00000021785	ZC3H6 (ENSEEEG00000021800)	itga9 (ENSEEEG00000021804)	GOLGA4 (ENSEEEG00000021806)	KCNK12 (ENSEEEG00000021813)	msh6 (ENSEEEG00000021816)	ENSEEEG00000021820
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00390000016613.c.e.a.a	ENSGT00940000157118.c.a	ENSGT01060000248724	ENSGT00390000004923.A.c.b	ENSGT00940000166262	ENSGT00390000009361	ENSGT00940000165880.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000157084.e.b.a	ENSGT00390000010094.b	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00390000003178.c	ENSGT00940000161693	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00690000102227	ENSGT00940000161847.a	ENSGT00940000157396	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424.a	ENSGT00550000075024
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	776									ENSGT00940000155447.p	ENSGT00500000044926.e	ENSGT00940000157084.e.b.a.a	ENSGT00390000010094.b.c	ENSGT00940000164505.b	ENSGT00950000182898.a.a.a.a.b.h.a	ENSGT00940000155683 #21	ENSGT00530000063692.b.i #22	ENSGT00950000183154.a.b.f #23	ENSGT00390000016757.v
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1463											TMEM63B (ENSCARG00000056772)	ENSCARG00000056705	ENSCARG00000056699	slc29a1a (ENSCARG00000056567)	MTRF1L (ENSCARG00000056538) #21	fbxo5 (ENSCARG00000056526) #22	vip (ENSCARG00000056472) #23	ENSCARG00000056440
Goldfish	MODERN SPECIES	4	ENSCARG00000009843	zgc:172136 (ENSCARG00000009859)	fam135a (ENSCARG00000009887)	ENSCARG00000010030	ENSCARG00000010036	lmbrd1 (ENSCARG00000010100)	ADGRB3 (ENSCARG00000010883)	ENSCARG00000015391	zgc:171579 (ENSCARG00000015394)	ENSCARG00000015402	TMEM63B (ENSCARG00000015411)	ENSCARG00000015418	ENSCARG00000013384	slc29a1a (ENSCARG00000013395)	MTRF1L (ENSCARG00000013431) #21	fbxo5 (ENSCARG00000013439) #22	vip (ENSCARG00000013443) #23	ENSCARG00000013449	tmem254 (ENSCARG00000013452)	ENSCARG00000013457	STK32C (ENSCARG00000013531)	PWWP2B (ENSCARG00000014201)	srfb (ENSCARG00000014203)	PTK7 (ENSCARG00000014262)	ENSCARG00000015617	ENSCARG00000015635	lbh (ENSCARG00000015712)	lclat1 (ENSCARG00000015723)	slc30a10 (ENSCARG00000015729)	ypel5 (ENSCARG00000015733)	npas4l (ENSCARG00000015735)
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00530000063692.b.i #22
Golden-line barbel	MODERN SPECIES	3751																fbxo5 (ENSSGRG00000005453) #22
Cyprininae	ANCESTRAL SPECIES	4	ENSGT00950000182844.a.b.e	ENSGT00390000016613.c.e.a.b	ENSGT00940000157118.c.a.f	ENSGT01060000248724.b	ENSGT00390000004923.A.c.b	ENSGT00940000166262.a	ENSGT00390000009361.c	ENSGT00940000165880.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b.a	ENSGT00940000155447.o.a	ENSGT00500000044926.f	ENSGT00940000157084.e.b.a.b	ENSGT00390000010094.b.d	ENSGT00940000177437	ENSGT00950000182898.a.a.a.a.b.h.b	ENSGT00530000063692.b.j #22	ENSGT00950000183154.a.b.e #23	ENSGT00390000016757.u.b	ENSGT00390000003178.c.a.a	ENSGT00940000161693	ENSGT00940000157364.A.b	ENSGT00940000155669.l.b	ENSGT00940000156844.b.f	ENSGT00830000128368.b.d	ENSGT00690000102227.a	ENSGT00940000157396.d.a	ENSGT00940000156503.s.b	ENSGT00940000157364.A.a	ENSGT00940000155669.l.a	ENSGT00940000156844.b.e	ENSGT00830000128368.b.c
Cyprininae_a	ANCESTRAL SPECIES	242	ENSGT00940000157118.c.a.f	ENSGT01060000248724.b	ENSGT00940000155619.j.b.a.a.b	ENSGT00390000004923.A.c.b	ENSGT00940000166262.a	ENSGT00390000009361.c	ENSGT00940000165880.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b.a	ENSGT00940000155447.o.a	ENSGT00500000044926.f	ENSGT00940000157084.e.b.a.b	ENSGT00390000010094.b.d	ENSGT00940000177437	ENSGT00950000182898.a.a.a.a.b.h.b	ENSGT00940000155683.d #21	ENSGT00530000063692.b.j #22	ENSGT00950000183154.a.b.e #23	ENSGT00390000016757.u.b	ENSGT00390000003178.c.a.a	ENSGT00940000157364.A.a	ENSGT00940000155669.l.a	ENSGT00940000156844.b.e	ENSGT00830000128368.b.c	ENSGT00690000102227.b	ENSGT00940000161847.a	ENSGT00940000157396.e	ENSGT00940000156503.t	ENSGT00730000111139.b	ENSGT00940000161424.a.b	ENSGT00550000075024.c	ENSGT00530000063425.a.a.a.b.qd.a.a.a
Golden-line barbel	MODERN SPECIES	3874																fbxo5 (ENSSGRG00000007601) #22
Common carp reference	MODERN SPECIES	48	MACO1 (ENSCCRG00000041764)	ldlrap1b (ENSCCRG00000042817)	ENSCCRG00000042864	ENSCCRG00000082171	ENSCCRG00000042651	olig4 (ENSCCRG00000000358)	bsdc1 (ENSCCRG00000000372)	ENSCCRG00000053067	ENSCCRG00000073093	fgfr2 (ENSCCRG00000009600)	ENSCCRG00000047389	ENSCCRG00000047413	slc29a1a (ENSCCRG00000047472)	ENSCCRG00000047466	ENSCCRG00000073248	fbxo5 (ENSCCRG00000026773) #22	vip (ENSCCRG00000026783) #23	ENSCCRG00000059986	bcl2l11 (ENSCCRG00000024680)	ENSCCRG00000048885	ENSCCRG00000048882	ENSCCRG00000003602	ENSCCRG00000003612	zmp:0000001138 (ENSCCRG00000077405)	zmp:0000001006 (ENSCCRG00000023710)	ENSCCRG00000080190	itga9 (ENSCCRG00000035524)	ENSCCRG00000028161	KCNK12 (ENSCCRG00000062268)	msh6 (ENSCCRG00000062605)	fbxo11a (ENSCCRG00000056435)
Goldfish	MODERN SPECIES	31	fancl (ENSCARG00000038865)	kcns3a (ENSCARG00000038845)	wdr35 (ENSCARG00000038680)	matn3b (ENSCARG00000038571)	mtres1 (ENSCARG00000038554)	bend3 (ENSCARG00000038542)	pdss2 (ENSCARG00000038533)	fgfr2 (ENSCARG00000036312)	marcksl1a (ENSCARG00000036220)	ENSCARG00000036212	fgfr2 (ENSCARG00000018959)	ATE1 (ENSCARG00000018426)	TMEM63B (ENSCARG00000018299)	ENSCARG00000018254	slc29a1a (ENSCARG00000018115)	fbxo5 (ENSCARG00000018093) #22	vip (ENSCARG00000018077) #23	ENSCARG00000017301	ENSCARG00000017176	lhcgr (ENSCARG00000017091)	ENSCARG00000017005	ENSCARG00000016984	ENSCARG00000016981	marcksl1a (ENSCARG00000016966)	bsdc1 (ENSCARG00000016907)	olig4 (ENSCARG00000016897)	FNDC5 (ENSCARG00000016893)	ENSCARG00000016888	ldlrap1b (ENSCARG00000012796)	MACO1 (ENSCARG00000012777)	tmem50a (ENSCARG00000012773)
Zebrafish	MODERN SPECIES	4	ldlrap1b (ENSDARG00000039750)	ENSDARG00000112419	FNDC5 (ENSDARG00000069739)	ENSDARG00000098440	olig4 (ENSDARG00000052610)	bsdc1 (ENSDARG00000052623)	marcksl1a (ENSDARG00000039034)	ENSDARG00000076019	ENSDARG00000052646	fgfr2 (ENSDARG00000058115)	ATE1 (ENSDARG00000103813)	TMEM63B (ENSDARG00000104559)	ENSDARG00000098286	slc29a1a (ENSDARG00000101289)	MTRF1L (ENSDARG00000060005) #21	fbxo5 (ENSDARG00000039020) #22	vip (ENSDARG00000078247) #23	ANAPC1 (ENSDARG00000075687)	bcl2l11 (ENSDARG00000079144)	ACOXL (ENSDARG00000020149)	lhcgr (ENSDARG00000026081)	ENSDARG00000074695	TMEM87B (ENSDARG00000112581)	ENSDARG00000089519	zmp:0000001138 (ENSDARG00000071168)	zmp:0000001006 (ENSDARG00000090839)	ENSDARG00000075165	itga9 (ENSDARG00000032435)	GOLGA4 (ENSDARG00000075331)	KCNK12 (ENSDARG00000074530)	msh6 (ENSDARG00000104541)
Osteoglossiformes	ANCESTRAL SPECIES	3	ENSGT00950000183133.c.a	ENSGT00950000183133.c.b	ENSGT00520000059926	ENSGT00390000003349	ENSGT00940000154632	ENSGT00940000158015.k.a	ENSGT00940000154784.D.b.c.b	ENSGT00940000154784.D.a.a.b.a.b	ENSGT00940000158672.c	ENSGT00390000001057	ENSGT00940000157084.e.b	ENSGT00390000010094.b	ENSGT00940000177437	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000155683 #21	ENSGT00530000063692.b #22	ENSGT00950000183154.a.b #23	ENSGT00390000016757	ENSGT00940000178131	ENSGT00940000159084	ENSGT00940000159934	ENSGT00940000160678.b	ENSGT00390000011103.A.q	ENSGT00390000011103.A.p	ENSGT00390000005045	ENSGT00940000154864.b	ENSGT00940000155564.m	ENSGT00940000156568	ENSGT00940000157820.a.b	ENSGT00900000141103	ENSGT00440000033965
Asian bonytongue	MODERN SPECIES	19	snx5 (ENSSFOG00015031850)	ENSSFOG00015005314	ENSSFOG00015005284	ENSSFOG00015004952	capn2a (ENSSFOG00015004846)	capn1a (ENSSFOG00015004746)	mrps28 (ENSSFOG00015004723)	ENSSFOG00015004692	mrpl14 (ENSSFOG00015026352)	TMEM63B (ENSSFOG00015004603)	ENSSFOG00015004676	ENSSFOG00015029466	ENSSFOG00015025257	slc29a1a (ENSSFOG00015004506)	MTRF1L (ENSSFOG00015004475) #21	fbxo5 (ENSSFOG00015004459) #22	vip (ENSSFOG00015004402) #23	ANAPC1 (ENSSFOG00015004240)	ENSSFOG00015031047	sult6b1 (ENSSFOG00015030002)	slc30a6 (ENSSFOG00015018198)	ENSSFOG00015018187	ACYP2 (ENSSFOG00015027467)	SPTBN1 (ENSSFOG00015018087)	EML6 (ENSSFOG00015017819)	RTN4 (ENSSFOG00015027956)	ENSSFOG00015017748	rps27a (ENSSFOG00015017733)	mtif2 (ENSSFOG00015017713)	prorsd1 (ENSSFOG00015017697)	CCDC88A (ENSSFOG00015017646)
P. kingsleyae	MODERN SPECIES	239										ENSPKIG00000020852	ENSPKIG00000020858	ENSPKIG00000020864	tpk2 (ENSPKIG00000020877)	slc29a1a (ENSPKIG00000020909)	MTRF1L (ENSPKIG00000020934) #21	fbxo5 (ENSPKIG00000020947) #22	vip (ENSPKIG00000020964) #23	ANAPC1 (ENSPKIG00000021019)	ENSPKIG00000021123	sult6b1 (ENSPKIG00000021133)	slc30a6 (ENSPKIG00000021150)	ENSPKIG00000021174	ACYP2 (ENSPKIG00000021191)	SPTBN1 (ENSPKIG00000021235)	EML6 (ENSPKIG00000021373)	rtn4a (ENSPKIG00000021443)	ENSPKIG00000021466	ENSPKIG00000021479	rps27a (ENSPKIG00000021492)	mtif2 (ENSPKIG00000021512)	prorsd1 (ENSPKIG00000021531)
Spotted gar	MODERN SPECIES	654	ABCB10 (ENSLOCG00000015465)	NUP133 (ENSLOCG00000015468)	acta1b (ENSLOCG00000015470)	ccsapb (ENSLOCG00000015472)	rab4a (ENSLOCG00000015475)	rhoua (ENSLOCG00000015476)	pdcd2 (ENSLOCG00000015478)	tbp (ENSLOCG00000015481)	psmb1 (ENSLOCG00000015486)	fam120b (ENSLOCG00000015490)	dld (ENSLOCG00000015493)	phf10 (ENSLOCG00000015494)	zgc:77929 (ENSLOCG00000017353)	ppm1g (ENSLOCG00000015498)	MTRF1L (ENSLOCG00000015502) #21	fbxo5 (ENSLOCG00000015506) #22	vip (ENSLOCG00000015508) #23	ANAPC1 (ENSLOCG00000015510)	ANAPC1 (ENSLOCG00000015511)	ACOXL (ENSLOCG00000015514)	sult6b1 (ENSLOCG00000015518)	slc30a6 (ENSLOCG00000015520)	ENSLOCG00000017354	ENSLOCG00000015524	C2orf73 (ENSLOCG00000015525)	SPTBN1 (ENSLOCG00000015528)	EML6 (ENSLOCG00000015539)	rtn4a (ENSLOCG00000015545)	ENSLOCG00000017355	CLHC1 (ENSLOCG00000015546)	rps27a (ENSLOCG00000015551)
Reedfish	MODERN SPECIES	11	cog2 (ENSECRG00000002358)	pgbd5 (ENSECRG00000002343)	ENSECRG00000002325	lin9 (ENSECRG00000002268)	acbd3 (ENSECRG00000002232)	ENSECRG00000002219	vegfab (ENSECRG00000002185)	mrps18a (ENSECRG00000002145)	rsph9 (ENSECRG00000002130)	rsph9 (ENSECRG00000002101)	rsph9 (ENSECRG00000002067)	tmem63a (ENSECRG00000002026)	lft2 (ENSECRG00000001876)	cdc42bpab (ENSECRG00000001749)	MTRF1L (ENSECRG00000001698) #21	fbxo5 (ENSECRG00000001692) #22	ENSECRG00000001683	vip (ENSECRG00000001669) #23	ENSECRG00000001201	ENSECRG00000001023	ENSECRG00000001002	ENSECRG00000000977	ENSECRG00000000964	ENSECRG00000000940	ENSECRG00000000927	ENSECRG00000000919	ENSECRG00000000903	ENSECRG00000000889	dhrs4 (ENSECRG00000000861)	riox1 (ENSECRG00000000801)	ENSECRG00000000766
Elephant shark	MODERN SPECIES	1644						ENSCMIG00000007910	ENSCMIG00000007905	ltv1 (ENSCMIG00000007902)	ENSCMIG00000007898	sf3b5 (ENSCMIG00000007895)	oprm1 (ENSCMIG00000007862) #19	ENSCMIG00000007852	ENSCMIG00000007851 #20	ENSCMIG00000007848	MTRF1L (ENSCMIG00000007847) #21	ENSCMIG00000007845 #22	ENSCMIG00000007844 #23	ENSCMIG00000007842 #24	COL12A1 (ENSCMIG00000007639)	ENSCMIG00000007567	adat2 (ENSCMIG00000007562)	hivep2a (ENSCMIG00000007558)	AIG1 (ENSCMIG00000007554)	ENSCMIG00000007552	adgrg6 (ENSCMIG00000007546)	vta1 (ENSCMIG00000007541)	NMBR (ENSCMIG00000007536)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063692.b #22
Lamprey	MODERN SPECIES	3862														ENSPMAG00000006412	ENSPMAG00000006409	ENSPMAG00000006408 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063692.a ##22
Gnathostomata	ANCESTRAL SPECIES	666														ENSGT00940000154697	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936
Euteleostomi	ANCESTRAL SPECIES	26	ENSGT00650000093438	ENSGT00390000009631	ENSGT00390000013853	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.a	ENSGT01090000260040.b.a.b	ENSGT00940000157106	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Sarcopterygii	ANCESTRAL SPECIES	37	ENSGT00390000013853	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000158703	ENSGT00940000154697.a.a	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B
Tetrapoda	ANCESTRAL SPECIES	1	ENSGT00390000013853	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00940000169819	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B
Amniota	ANCESTRAL SPECIES	3	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Sauria	ANCESTRAL SPECIES		ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Archosauria	ANCESTRAL SPECIES		ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Aves	ANCESTRAL SPECIES	9	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Neognathae	ANCESTRAL SPECIES		ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Golden eagle	MODERN SPECIES	20	KLF10 (ENSACCG00020000936)	ENSACCG00020000952	UBR5 (ENSACCG00020001028)	RRM2B (ENSACCG00020001110)	NCALD (ENSACCG00020001132)	GRHL2 (ENSACCG00020001184)	ZNF706 (ENSACCG00020001245)	YWHAZ (ENSACCG00020001258)	ENSACCG00020001278	SNX31 (ENSACCG00020001323)	ANKRD46 (ENSACCG00020001341)	RNF19A (ENSACCG00020001363)	ENSACCG00020001393	ENSACCG00020001446	POLR2K (ENSACCG00020001468)	FBXO43 (ENSACCG00020001480) ##22	RGS22 (ENSACCG00020001537)	ENSACCG00020001602	ENSACCG00020001615	VPS13B (ENSACCG00020001758)	OSR2 (ENSACCG00020001813)	STK3 (ENSACCG00020001831)	KCNS2 (ENSACCG00020001844)	NIPAL2 (ENSACCG00020001866)	POP1 (ENSACCG00020001927)	RIDA (ENSACCG00020001973)	RPL30 (ENSACCG00020002001)	MATN2 (ENSACCG00020002048)	LAPTM4B (ENSACCG00020002074)	MTDH (ENSACCG00020002122)	CPQ (ENSACCG00020002156)
Kakapo	MODERN SPECIES		AZIN1 (ENSSHBG00005001390)	KLF10 (ENSSHBG00005001410)	ENSSHBG00005001422	UBR5 (ENSSHBG00005001451)	RRM2B (ENSSHBG00005001510)	NCALD (ENSSHBG00005001526)	GRHL2 (ENSSHBG00005001579)	ZNF706 (ENSSHBG00005001607)	YWHAZ (ENSSHBG00005001617)	ENSSHBG00005001643	SNX31 (ENSSHBG00005001685)	ANKRD46 (ENSSHBG00005001715)	RNF19A (ENSSHBG00005001737)	ENSSHBG00005001773	ENSSHBG00005001799	FBXO43 (ENSSHBG00005001820) ##22	ENSSHBG00005001842	ENSSHBG00005001870	VPS13B (ENSSHBG00005002000)	OSR2 (ENSSHBG00005002071)	STK3 (ENSSHBG00005002130)	KCNS2 (ENSSHBG00005002261)	ENSSHBG00005002272	ENSSHBG00005002282	POP1 (ENSSHBG00005002300)	RIDA (ENSSHBG00005002325)	ENSSHBG00005002337	MATN2 (ENSSHBG00005002362)	LAPTM4B (ENSSHBG00005002393)	MTDH (ENSSHBG00005002419)	CPQ (ENSSHBG00005002449)
Passeriformes	ANCESTRAL SPECIES		ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000168212	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Zebra finch	MODERN SPECIES	12	ATP6V1C1 (ENSTGUG00000012137)	AZIN1 (ENSTGUG00000012128)	KLF10 (ENSTGUG00000012120)	ENSTGUG00000012119	UBR5 (ENSTGUG00000012099)	RRM2B (ENSTGUG00000012093)	NCALD (ENSTGUG00000022354)	GRHL2 (ENSTGUG00000012086)	ZNF706 (ENSTGUG00000020385)	YWHAZ (ENSTGUG00000012078)	PABPC1 (ENSTGUG00000012067)	ANKRD46 (ENSTGUG00000026399)	RNF19A (ENSTGUG00000012061)	SPAG1 (ENSTGUG00000012055)	POLR2K (ENSTGUG00000012051)	FBXO43 (ENSTGUG00000012050) ##22	COX6C (ENSTGUG00000012043)	RGS22 (ENSTGUG00000026099)	VPS13B (ENSTGUG00000012030)	OSR2 (ENSTGUG00000012027)	KCNS2 (ENSTGUG00000022432)	STK3 (ENSTGUG00000012023)	NIPAL2 (ENSTGUG00000012018)	POP1 (ENSTGUG00000012011)	RIDA (ENSTGUG00000022311)	RPL30 (ENSTGUG00000019169)	MATN2 (ENSTGUG00000011992)	LAPTM4B (ENSTGUG00000011987)	MTDH (ENSTGUG00000011979)	CPQ (ENSTGUG00000011977)	ENSTGUG00000022372
Common canary	MODERN SPECIES		ATP6V1C1 (ENSSCAG00000006085)	AZIN1 (ENSSCAG00000006075)	KLF10 (ENSSCAG00000006068)	ENSSCAG00000006053	UBR5 (ENSSCAG00000004762)	RRM2B (ENSSCAG00000004465)	NCALD (ENSSCAG00000004435)	GRHL2 (ENSSCAG00000004431)	ZNF706 (ENSSCAG00000004420)	YWHAZ (ENSSCAG00000004408)	ENSSCAG00000004402	ANKRD46 (ENSSCAG00000004395)	RNF19A (ENSSCAG00000004382)	SPAG1 (ENSSCAG00000004335)	POLR2K (ENSSCAG00000004326)	FBXO43 (ENSSCAG00000004321) ##22	RGS22 (ENSSCAG00000004280)	ENSSCAG00000004258	VPS13B (ENSSCAG00000004201)	OSR2 (ENSSCAG00000004150)	STK3 (ENSSCAG00000004146)	KCNS2 (ENSSCAG00000004119)	NIPAL2 (ENSSCAG00000004107)	POP1 (ENSSCAG00000004093)	RIDA (ENSSCAG00000004086)	ENSSCAG00000004079	MATN2 (ENSSCAG00000004036)	LAPTM4B (ENSSCAG00000004000)	MTDH (ENSSCAG00000003983)	CPQ (ENSSCAG00000003970)	SDC2 (ENSSCAG00000003964)
Medium ground finch	MODERN SPECIES	56	BAALC (ENSGFOG00000013201)	ATP6V1C1 (ENSGFOG00000013195)	AZIN1 (ENSGFOG00000013190)	KLF10 (ENSGFOG00000013188)	UBR5 (ENSGFOG00000013101)	RRM2B (ENSGFOG00000013079)	NCALD (ENSGFOG00000013073)	GRHL2 (ENSGFOG00000013066)	ZNF706 (ENSGFOG00000013062)	YWHAZ (ENSGFOG00000013060)	ENSGFOG00000012811	ANKRD46 (ENSGFOG00000012778)	RNF19A (ENSGFOG00000012773)	SPAG1 (ENSGFOG00000012762)	POLR2K (ENSGFOG00000012756)	FBXO43 (ENSGFOG00000012748) ##22	RGS22 (ENSGFOG00000012743)	ENSGFOG00000012739	VPS13B (ENSGFOG00000012717)	OSR2 (ENSGFOG00000012706)	STK3 (ENSGFOG00000012684)	KCNS2 (ENSGFOG00000012673)	NIPAL2 (ENSGFOG00000012666)	POP1 (ENSGFOG00000012661)	RIDA (ENSGFOG00000012658)	RPL30 (ENSGFOG00000012649)	MATN2 (ENSGFOG00000012616)	LAPTM4B (ENSGFOG00000012597)	MTDH (ENSGFOG00000012594)	CPQ (ENSGFOG00000012591)
Flycatcher	MODERN SPECIES	11	FZD6 (ENSFALG00000005942)	ATP6V1C1 (ENSFALG00000005922)	AZIN1 (ENSFALG00000005919)	KLF10 (ENSFALG00000005917)	UBR5 (ENSFALG00000005901)	RRM2B (ENSFALG00000005893)	NCALD (ENSFALG00000005886)	GRHL2 (ENSFALG00000005879)	ZNF706 (ENSFALG00000024075)	YWHAZ (ENSFALG00000005860)	ENSFALG00000005841	ANKRD46 (ENSFALG00000024541)	RNF19A (ENSFALG00000005815)	SPAG1 (ENSFALG00000005801)	POLR2K (ENSFALG00000025497)	FBXO43 (ENSFALG00000005784) ##22	ENSFALG00000025247	RGS22 (ENSFALG00000005772)	ENSFALG00000005766	VPS13B (ENSFALG00000005746)	OSR2 (ENSFALG00000023196)	STK3 (ENSFALG00000005725)	KCNS2 (ENSFALG00000014931)	NIPAL2 (ENSFALG00000005720)	POP1 (ENSFALG00000005711)	RIDA (ENSFALG00000005704)	RPL30 (ENSFALG00000005701)	MATN2 (ENSFALG00000005691)	LAPTM4B (ENSFALG00000027232)	MTDH (ENSFALG00000005676)	CPQ (ENSFALG00000005663)
Great tit	MODERN SPECIES	11	BAALC (ENSPMJG00000010206)	ATP6V1C1 (ENSPMJG00000010205)	AZIN1 (ENSPMJG00000010153)	KLF10 (ENSPMJG00000010151)	UBR5 (ENSPMJG00000007967)	RRM2B (ENSPMJG00000007563)	NCALD (ENSPMJG00000007538)	GRHL2 (ENSPMJG00000007536)	ZNF706 (ENSPMJG00000007434)	YWHAZ (ENSPMJG00000007432)	PABPC1 (ENSPMJG00000007428)	ANKRD46 (ENSPMJG00000007399)	RNF19A (ENSPMJG00000007391)	SPAG1 (ENSPMJG00000007386)	ENSPMJG00000007382	FBXO43 (ENSPMJG00000007381) ##22	ENSPMJG00000007372	ENSPMJG00000007351	VPS13B (ENSPMJG00000007299)	OSR2 (ENSPMJG00000007232)	KCNS2 (ENSPMJG00000007144)	STK3 (ENSPMJG00000007134)	NIPAL2 (ENSPMJG00000007131)	POP1 (ENSPMJG00000007114)	RIDA (ENSPMJG00000007110)	ENSPMJG00000007105	MATN2 (ENSPMJG00000007065)	LAPTM4B (ENSPMJG00000007059)	MTDH (ENSPMJG00000007046)	CPQ (ENSPMJG00000006995)	SDC2 (ENSPMJG00000006968)
Galloanserae	ANCESTRAL SPECIES		ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Anatidae	ANCESTRAL SPECIES	3	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Pink-footed goose	MODERN SPECIES	29	AZIN1 (ENSABRG00000008498)	KLF10 (ENSABRG00000008484)	ENSABRG00000008475	UBR5 (ENSABRG00000004318)	RRM2B (ENSABRG00000003953)	NCALD (ENSABRG00000003874)	GRHL2 (ENSABRG00000003859)	ZNF706 (ENSABRG00000003849)	YWHAZ (ENSABRG00000003841)	ENSABRG00000002585	SNX31 (ENSABRG00000002490)	ANKRD46 (ENSABRG00000002470)	RNF19A (ENSABRG00000002458)	SPAG1 (ENSABRG00000002446)	ENSABRG00000002428	FBXO43 (ENSABRG00000002410) ##22	RGS22 (ENSABRG00000002360)	ENSABRG00000002340	VPS13B (ENSABRG00000002016)	OSR2 (ENSABRG00000001956)	STK3 (ENSABRG00000001920)	KCNS2 (ENSABRG00000001895)	NIPAL2 (ENSABRG00000001809)	POP1 (ENSABRG00000001452)	RIDA (ENSABRG00000000756)	ENSABRG00000000669	MATN2 (ENSABRG00000000565)	LAPTM4B (ENSABRG00000000543)	MTDH (ENSABRG00000000437)	CPQ (ENSABRG00000000332)	SDC2 (ENSABRG00000000305)
Duck	MODERN SPECIES	10	ENSAPLG00000004191	ODF1 (ENSAPLG00000001670)	ENSAPLG00000027038	RRM2B (ENSAPLG00000005483)	ENSAPLG00000024625	NCALD (ENSAPLG00000009495)	GRHL2 (ENSAPLG00000002882)	ZNF706 (ENSAPLG00000022331)	YWHAZ (ENSAPLG00000002635)	ENSAPLG00000001129	SNX31 (ENSAPLG00000024380)	ANKRD46 (ENSAPLG00000017801)	RNF19A (ENSAPLG00000015669)	SPAG1 (ENSAPLG00000015431)	POLR2K (ENSAPLG00000027673)	FBXO43 (ENSAPLG00000015403) ##22	RGS22 (ENSAPLG00000016769)	ENSAPLG00000015371	VPS13B (ENSAPLG00000014920)	OSR2 (ENSAPLG00000031149)	STK3 (ENSAPLG00000014803)	KCNS2 (ENSAPLG00000000829)	NIPAL2 (ENSAPLG00000014788)	POP1 (ENSAPLG00000014418)	RIDA (ENSAPLG00000014330)	MATN2 (ENSAPLG00000014019)	LAPTM4B (ENSAPLG00000013874)	MTDH (ENSAPLG00000013199)	CPQ (ENSAPLG00000013098)	SDC2 (ENSAPLG00000030427)	PTDSS1 (ENSAPLG00000012776)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Japanese quail	MODERN SPECIES	11	DCAF13 (ENSCJPG00005001143)	RIMS2 (ENSCJPG00005001055)	DCSTAMP (ENSCJPG00005001023)	DPYS (ENSCJPG00005001007)	LRP12 (ENSCJPG00005000976)	ENSCJPG00005000971	NCALD (ENSCJPG00005000962)	GRHL2 (ENSCJPG00005000936)	ZNF706 (ENSCJPG00005000899)	ENSCJPG00005000868	ENSCJPG00005000858	ANKRD46 (ENSCJPG00005000855)	RNF19A (ENSCJPG00005000841)	SPAG1 (ENSCJPG00005000826)	ENSCJPG00005000818	FBXO43 (ENSCJPG00005000815) ##22	RGS22 (ENSCJPG00005000775)	ENSCJPG00005000767	VPS13B (ENSCJPG00005000759)	OSR2 (ENSCJPG00005000750)	STK3 (ENSCJPG00005000746)	KCNS2 (ENSCJPG00005000740)	NIPAL2 (ENSCJPG00005000735)	POP1 (ENSCJPG00005000733)	RIDA (ENSCJPG00005000704)	ENSCJPG00005000701	ENSCJPG00005000694	MATN2 (ENSCJPG00005000677)	LAPTM4B (ENSCJPG00005000674)	MTDH (ENSCJPG00005000660)	CPQ (ENSCJPG00005000656)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Chicken	MODERN SPECIES	11	AZIN1 (ENSGALG00010012061)	KLF10 (ENSGALG00010012052)	ODF1 (ENSGALG00010012039)	UBR5 (ENSGALG00010012024)	RRM2B (ENSGALG00010011915)	ENSGALG00010013415	NCALD (ENSGALG00010011885)	GRHL2 (ENSGALG00010011772)	ZNF706 (ENSGALG00010011751)	YWHAZ (ENSGALG00010011703)	PABPC1 (ENSGALG00010011414)	ANKRD46 (ENSGALG00010011401)	RNF19A (ENSGALG00010011359)	SPAG1 (ENSGALG00010010894)	ENSGALG00010010876	FBXO43 (ENSGALG00010010872) ##22	RGS22 (ENSGALG00010011347)	COX6C (ENSGALG00010011326)	VPS13B (ENSGALG00010011312)	OSR2 (ENSGALG00010011297)	STK3 (ENSGALG00010011982)	KCNS2 (ENSGALG00010011874)	NIPAL2 (ENSGALG00010011683)	POP1 (ENSGALG00010011673)	RIDA (ENSGALG00010011662)	RPL30 (ENSGALG00010011650)	MATN2 (ENSGALG00010011628)	LAPTM4B (ENSGALG00010011556)	MTDH (ENSGALG00010011531)	CPQ (ENSGALG00010011497)	SDC2 (ENSGALG00010011477)
Turkey	MODERN SPECIES	22	ENSMGAG00000018130	ATP6V1C1 (ENSMGAG00000012335)	AZIN1 (ENSMGAG00000012325)	KLF10 (ENSMGAG00000012319)	UBR5 (ENSMGAG00000012296)	RRM2B (ENSMGAG00000012288)	NCALD (ENSMGAG00000012286)	GRHL2 (ENSMGAG00000012259)	ZNF706 (ENSMGAG00000021301)	YWHAZ (ENSMGAG00000012251)	ENSMGAG00000012239	ANKRD46 (ENSMGAG00000012230)	RNF19A (ENSMGAG00000012214)	SPAG1 (ENSMGAG00000012211)	ENSMGAG00000012237	FBXO43 (ENSMGAG00000012227) ##22	RGS22 (ENSMGAG00000012217)	ENSMGAG00000012208	VPS13B (ENSMGAG00000012184)	KCNS2 (ENSMGAG00000015861)	STK3 (ENSMGAG00000012178)	NIPAL2 (ENSMGAG00000012174)	POP1 (ENSMGAG00000012167)	RIDA (ENSMGAG00000012165)	RPL30 (ENSMGAG00000012160)	MATN2 (ENSMGAG00000012141)	LAPTM4B (ENSMGAG00000012136)	MTDH (ENSMGAG00000012128)	CPQ (ENSMGAG00000012125)	SDC2 (ENSMGAG00000012122)	PTDSS1 (ENSMGAG00000012113)
African ostrich	MODERN SPECIES	642	ENSSCUG00000009407	STRADA (ENSSCUG00000009412)	CCDC47 (ENSSCUG00000009422)	DDX42 (ENSSCUG00000009431)	ENSSCUG00000009441	ENSSCUG00000009442	ENSSCUG00000009445	CDC27 (ENSSCUG00000009449)	YWHAZ (ENSSCUG00000009459)	ENSSCUG00000009462	SNX31 (ENSSCUG00000009466)	ANKRD46 (ENSSCUG00000009469)	RNF19A (ENSSCUG00000009475)	SPAG1 (ENSSCUG00000009477)	POLR2K (ENSSCUG00000009482)	FBXO43 (ENSSCUG00000009483) ##22	ENSSCUG00000009487	ENSSCUG00000009491	VPS13B (ENSSCUG00000009502)	OSR2 (ENSSCUG00000009523)	STK3 (ENSSCUG00000009524)	KCNS2 (ENSSCUG00000009525)	NIPAL2 (ENSSCUG00000009527)	POP1 (ENSSCUG00000009532)	RIDA (ENSSCUG00000009535)	RPL30 (ENSSCUG00000009540)	MATN2 (ENSSCUG00000009542)	LAPTM4B (ENSSCUG00000009550)	MTDH (ENSSCUG00000009552)	CPQ (ENSSCUG00000009555)	SDC2 (ENSSCUG00000009559)
Australian saltwater crocodile	MODERN SPECIES		AZIN1 (ENSCPRG00005005161)	KLF10 (ENSCPRG00005005151)	ODF1 (ENSCPRG00005005123)	UBR5 (ENSCPRG00005004043)	RRM2B (ENSCPRG00005003945)	NCALD (ENSCPRG00005003858)	GRHL2 (ENSCPRG00005003804)	ZNF706 (ENSCPRG00005003778)	ENSCPRG00005003741	YWHAZ (ENSCPRG00005003738)	PABPC1 (ENSCPRG00005003706)	ANKRD46 (ENSCPRG00005003674)	RNF19A (ENSCPRG00005003612)	SPAG1 (ENSCPRG00005003579)	ENSCPRG00005003572	FBXO43 (ENSCPRG00005003564) ##22	RGS22 (ENSCPRG00005003536)	ENSCPRG00005003531	ENSCPRG00005003526	ENSCPRG00005003522	VPS13B (ENSCPRG00005003244)	OSR2 (ENSCPRG00005003096)	STK3 (ENSCPRG00005003092)	KCNS2 (ENSCPRG00005003027)	NIPAL2 (ENSCPRG00005003016)	POP1 (ENSCPRG00005002970)	RIDA (ENSCPRG00005002964)	ENSCPRG00005002960	MATN2 (ENSCPRG00005002948)	LAPTM4B (ENSCPRG00005002911)	MTDH (ENSCPRG00005002854)
Cryptodira	ANCESTRAL SPECIES	22	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Testudinoidea	ANCESTRAL SPECIES	16	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00990000205100.H	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C.j	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Emydidae	ANCESTRAL SPECIES	15	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT01000000217029	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00990000205100.H	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C.j	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
painted turtle	MODERN SPECIES	703												ENSCPBG00000008103	RNF19A (ENSCPBG00000008095)	SPAG1 (ENSCPBG00000008076)	ENSCPBG00000008066	FBXO43 (ENSCPBG00000008062) ##22	ENSCPBG00000008052	RGS22 (ENSCPBG00000007988)	ENSCPBG00000007962	VPS13B (ENSCPBG00000007691)	ENSCPBG00000007553	OSR2 (ENSCPBG00000007541)	ENSCPBG00000007539	ENSCPBG00000006403	KCNS2 (ENSCPBG00000006391)	NIPAL2 (ENSCPBG00000006386)	POP1 (ENSCPBG00000006373)	RIDA (ENSCPBG00000006365)	ENSCPBG00000006360	MATN2 (ENSCPBG00000006344)	LAPTM4B (ENSCPBG00000006332)
Three-toed box turtle	MODERN SPECIES	24	KLF10 (ENSTMTG00000002842)	ENSTMTG00000002838	UBR5 (ENSTMTG00000002244)	RRM2B (ENSTMTG00000002077)	NCALD (ENSTMTG00000002064)	GRHL2 (ENSTMTG00000001993)	ZNF706 (ENSTMTG00000001982)	YWHAZ (ENSTMTG00000001978)	ENSTMTG00000001967	SNX31 (ENSTMTG00000001953)	ANKRD46 (ENSTMTG00000001947)	ENSTMTG00000001938	RNF19A (ENSTMTG00000001927)	SPAG1 (ENSTMTG00000001874)	ENSTMTG00000001861	FBXO43 (ENSTMTG00000001856) ##22	ENSTMTG00000001847	RGS22 (ENSTMTG00000001683)	ENSTMTG00000001627	VPS13B (ENSTMTG00000001596)	OSR2 (ENSTMTG00000001562)	STK3 (ENSTMTG00000001542)	KCNS2 (ENSTMTG00000001531)	NIPAL2 (ENSTMTG00000001501)	POP1 (ENSTMTG00000001351)	RIDA (ENSTMTG00000001302)	ENSTMTG00000001285	MATN2 (ENSTMTG00000001240)	LAPTM4B (ENSTMTG00000001222)	MTDH (ENSTMTG00000001203)	CPQ (ENSTMTG00000001190)
Testudinidae	ANCESTRAL SPECIES	27	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00990000205100.H	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C.j	ENSGT00940000154984.C.i.b	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Goode s thornscrub tortoise	MODERN SPECIES	11	AZIN1 (ENSGEVG00005010085)	KLF10 (ENSGEVG00005010064)	UBR5 (ENSGEVG00005009817)	RRM2B (ENSGEVG00005009750)	NCALD (ENSGEVG00005009663)	GRHL2 (ENSGEVG00005009254)	ZNF706 (ENSGEVG00005009200)	YWHAZ (ENSGEVG00005009162)	ENSGEVG00005009075	SNX31 (ENSGEVG00005009016)	ANKRD46 (ENSGEVG00005008978)	RNF19A (ENSGEVG00005008938)	ENSGEVG00005008915	ENSGEVG00005003911	POLR2K (ENSGEVG00005003900)	FBXO43 (ENSGEVG00005003892) ##22	ENSGEVG00005003886	RGS22 (ENSGEVG00005003839)	ENSGEVG00005003811	VPS13B (ENSGEVG00005003667)	OSR2 (ENSGEVG00005003609)	STK3 (ENSGEVG00005003589)	KCNS2 (ENSGEVG00005003581)	NIPAL2 (ENSGEVG00005003534)	POP1 (ENSGEVG00005003506)	RIDA (ENSGEVG00005003496)	ENSGEVG00005003487	MATN2 (ENSGEVG00005003446)	LAPTM4B (ENSGEVG00005003428)	MTDH (ENSGEVG00005003413)	ENSGEVG00005003404
Abingdon island giant tortoise	MODERN SPECIES	149							ENSCABG00000010027	COPS5 (ENSCABG00000009861)	ENSCABG00000007865	SNX31 (ENSCABG00000007827)	ANKRD46 (ENSCABG00000007824)	RNF19A (ENSCABG00000007813)	ENSCABG00000007801	ENSCABG00000007798	ENSCABG00000007796	FBXO43 (ENSCABG00000007794) ##22	RGS22 (ENSCABG00000007785)
Chinese turtle	MODERN SPECIES	1043	AZIN1 (ENSPSIG00000009936)	KLF10 (ENSPSIG00000012678)	ENSPSIG00000000031	UBR5 (ENSPSIG00000013244)	RRM2B (ENSPSIG00000016761)	NCALD (ENSPSIG00000003638)	GRHL2 (ENSPSIG00000003669)	ZNF706 (ENSPSIG00000003699)	YWHAZ (ENSPSIG00000003703)	ENSPSIG00000003719	SNX31 (ENSPSIG00000003962)	ANKRD46 (ENSPSIG00000003995)	RNF19A (ENSPSIG00000004011)	SPAG1 (ENSPSIG00000004026)	POLR2K (ENSPSIG00000004097)	FBXO43 (ENSPSIG00000004104) ##22	RGS22 (ENSPSIG00000004174)	ENSPSIG00000004452	ENSPSIG00000004457
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Episquamata	ANCESTRAL SPECIES	1	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Laterata	ANCESTRAL SPECIES	5	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Common wall lizard	MODERN SPECIES	15	ODF1 (ENSPMRG00000020203)	UBR5 (ENSPMRG00000020286)	RRM2B (ENSPMRG00000020530)	NCALD (ENSPMRG00000020540)	GRHL2 (ENSPMRG00000020548)	ZNF706 (ENSPMRG00000020581)	ENSPMRG00000020587	ENSPMRG00000020682	ENSPMRG00000021054	SNX31 (ENSPMRG00000021056)	ENSPMRG00000021063	ENSPMRG00000021071	RNF19A (ENSPMRG00000021080)	SPAG1 (ENSPMRG00000021093)	POLR2K (ENSPMRG00000021106)	FBXO43 (ENSPMRG00000021113) ##22	RGS22 (ENSPMRG00000021151)	ENSPMRG00000021224	VPS13B (ENSPMRG00000021254)	ENSPMRG00000021318	OSR2 (ENSPMRG00000021333)	STK3 (ENSPMRG00000021340)	ENSPMRG00000021346	KCNS2 (ENSPMRG00000021350)	NIPAL2 (ENSPMRG00000021352)	POP1 (ENSPMRG00000021364)	ENSPMRG00000021376	ENSPMRG00000021385	ENSPMRG00000021391	MATN2 (ENSPMRG00000021402)	LAPTM4B (ENSPMRG00000021414)
Argentine black and white tegu	MODERN SPECIES	13	AZIN1 (ENSSMRG00000021142)	KLF10 (ENSSMRG00000021143)	ODF1 (ENSSMRG00000021144)	UBR5 (ENSSMRG00000021145)	RRM2B (ENSSMRG00000021146)	NCALD (ENSSMRG00000021147)	GRHL2 (ENSSMRG00000021148)	ZNF706 (ENSSMRG00000021151)	YWHAZ (ENSSMRG00000021154)	ENSSMRG00000021155	SNX31 (ENSSMRG00000021156)	ANKRD46 (ENSSMRG00000021157)	RNF19A (ENSSMRG00000021161)	SPAG1 (ENSSMRG00000021163)	ENSSMRG00000021166	FBXO43 (ENSSMRG00000021167) ##22	RGS22 (ENSSMRG00000021168)	ENSSMRG00000021170	OXR1 (ENSSMRG00000021171)	ABRA (ENSSMRG00000021172)	ENSSMRG00000021173	ANGPT1 (ENSSMRG00000021397)	ENSSMRG00000021398	RSPO2 (ENSSMRG00000021399)	EIF3E (ENSSMRG00000021400)	EMC2 (ENSSMRG00000021402)	TMEM74 (ENSSMRG00000021403)	TRHR (ENSSMRG00000021404)	NUDCD1 (ENSSMRG00000021405)	ENY2 (ENSSMRG00000021406)	EBAG9 (ENSSMRG00000021407)
Toxicofera	ANCESTRAL SPECIES	8	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Elapidae	ANCESTRAL SPECIES	8	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00990000212994	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Elapidae_a	ANCESTRAL SPECIES	27														ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00990000212994	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a.f	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Acanthophiinae	ANCESTRAL SPECIES	15	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.d	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703.a	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00990000212994	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a.f	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Mainland tiger snake	MODERN SPECIES	5	AZIN1 (ENSNSUG00000012421)	KLF10 (ENSNSUG00000012422)	ODF1 (ENSNSUG00000012423)	UBR5 (ENSNSUG00000012424)	RRM2B (ENSNSUG00000012425)	NCALD (ENSNSUG00000012426)	GRHL2 (ENSNSUG00000012442)	ZNF706 (ENSNSUG00000012473)	YWHAZ (ENSNSUG00000012474)	ENSNSUG00000012475	ANKRD46 (ENSNSUG00000012476)	ENSNSUG00000012477	RNF19A (ENSNSUG00000012478)	ENSNSUG00000012479	POLR2K (ENSNSUG00000012481)	FBXO43 (ENSNSUG00000012482) ##22	RGS22 (ENSNSUG00000012483)	ENSNSUG00000012484	VPS13B (ENSNSUG00000012485)	OSR2 (ENSNSUG00000012665)	STK3 (ENSNSUG00000012667)	KCNS2 (ENSNSUG00000012670)	ENSNSUG00000012671	POP1 (ENSNSUG00000012672)	RIDA (ENSNSUG00000012673)	ENSNSUG00000012675	MATN2 (ENSNSUG00000012677)	LAPTM4B (ENSNSUG00000012686)	MTDH (ENSNSUG00000012721)	CPQ (ENSNSUG00000012722)	SDC2 (ENSNSUG00000012725)
Eastern brown snake	MODERN SPECIES	914																FBXO43 (ENSPTXG00000015258) ##22
Blue-lipped sea krait	MODERN SPECIES	8322														ENSLLTG00000017573	ENSLLTG00000017576	FBXO43 (ENSLLTG00000017578) ##22
Indian cobra	MODERN SPECIES	2	AZIN1 (ENSNNAG00000011907)	KLF10 (ENSNNAG00000011882)	ODF1 (ENSNNAG00000011845)	UBR5 (ENSNNAG00000010476)	RRM2B (ENSNNAG00000010292)	NCALD (ENSNNAG00000010259)	GRHL2 (ENSNNAG00000010205)	ZNF706 (ENSNNAG00000010167)	YWHAZ (ENSNNAG00000010134)	ENSNNAG00000010036	SNX31 (ENSNNAG00000010009)	ANKRD46 (ENSNNAG00000009986)	RNF19A (ENSNNAG00000009943)	SPAG1 (ENSNNAG00000009874)	POLR2K (ENSNNAG00000009858)	FBXO43 (ENSNNAG00000009835) ##22	ENSNNAG00000009816	ENSNNAG00000009754	VPS13B (ENSNNAG00000009432)	OSR2 (ENSNNAG00000009287)	STK3 (ENSNNAG00000009221)	KCNS2 (ENSNNAG00000009173)	NIPAL2 (ENSNNAG00000009062)	POP1 (ENSNNAG00000008748)	RIDA (ENSNNAG00000008700)	ENSNNAG00000008659	MATN2 (ENSNNAG00000008599)	LAPTM4B (ENSNNAG00000008558)	MTDH (ENSNNAG00000008450)	CPQ (ENSNNAG00000008320)	SDC2 (ENSNNAG00000008271)
Lizard	MODERN SPECIES	1007									ENSACAG00000016470	SNX31 (ENSACAG00000016431)	ANKRD46 (ENSACAG00000016427)	RNF19A (ENSACAG00000016401)	ENSACAG00000028868	ENSACAG00000044886	ENSACAG00000020961	FBXO43 (ENSACAG00000016378) ##22	RGS22 (ENSACAG00000016376)	ENSACAG00000041646	VPS13B (ENSACAG00000016301)	OSR2 (ENSACAG00000016280)
Mammalia	ANCESTRAL SPECIES	3	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222
Theria	ANCESTRAL SPECIES	7	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00940000168918	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00940000168918	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a.j	ENSGT00940000168918	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Diprotodontia	ANCESTRAL SPECIES	36	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT01090000260040.a.a.a	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a.j	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Diprotodontia_a	ANCESTRAL SPECIES	35	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT01090000260040.a.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000167005	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00940000168918	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Common wonbat	MODERN SPECIES	569	ENSVURG00010007234	KLF10 (ENSVURG00010007227)	ODF1 (ENSVURG00010007216)	UBR5 (ENSVURG00010007168)	RRM2B (ENSVURG00010007127)	NCALD (ENSVURG00010007102)	GRHL2 (ENSVURG00010007080)	ZNF706 (ENSVURG00010007040)	ENSVURG00010007014	ENSVURG00010007000	SNX31 (ENSVURG00010006979)	ANKRD46 (ENSVURG00010006974)	RNF19A (ENSVURG00010006960)	SPAG1 (ENSVURG00010006930)	ENSVURG00010006920	FBXO43 (ENSVURG00010006915) ##22	RGS22 (ENSVURG00010006828)	ENSVURG00010006812	VPS13B (ENSVURG00010006729)	OSR2 (ENSVURG00010006697)	STK3 (ENSVURG00010006666)	KCNS2 (ENSVURG00010006648)	NIPAL2 (ENSVURG00010006625)	POP1 (ENSVURG00010006606)	RIDA (ENSVURG00010006598)	ENSVURG00010006590	ENSVURG00010006560	MATN2 (ENSVURG00010006515)	LAPTM4B (ENSVURG00010006500)	MTDH (ENSVURG00010006472)	CPQ (ENSVURG00010006454)
koala	MODERN SPECIES	7	KLF10 (ENSPCIG00000025820)	ENSPCIG00000036257	ODF1 (ENSPCIG00000029967)	UBR5 (ENSPCIG00000006962)	RRM2B (ENSPCIG00000019054)	NCALD (ENSPCIG00000034283)	GRHL2 (ENSPCIG00000004799)	ZNF706 (ENSPCIG00000033089)	YWHAZ (ENSPCIG00000004775)	ENSPCIG00000000267	SNX31 (ENSPCIG00000006584)	ANKRD46 (ENSPCIG00000000126)	RNF19A (ENSPCIG00000000069)	SPAG1 (ENSPCIG00000000080)	ENSPCIG00000000145	FBXO43 (ENSPCIG00000000297) ##22	RGS22 (ENSPCIG00000000320)	ENSPCIG00000000378	VPS13B (ENSPCIG00000000396)	OSR2 (ENSPCIG00000000464)	STK3 (ENSPCIG00000000136)	KCNS2 (ENSPCIG00000000251)	NIPAL2 (ENSPCIG00000012213)	POP1 (ENSPCIG00000012216)	RIDA (ENSPCIG00000012218)	ENSPCIG00000012220	ENSPCIG00000012225	MATN2 (ENSPCIG00000012233)	LAPTM4B (ENSPCIG00000028330)	MTDH (ENSPCIG00000028335)	ENSPCIG00000028341
Tasmanian devil	MODERN SPECIES		ENSSHAG00000028599	ENSSHAG00000029341	UBR5 (ENSSHAG00000017701)	RRM2B (ENSSHAG00000017628)	NCALD (ENSSHAG00000028894)	GRHL2 (ENSSHAG00000015849)	ENSSHAG00000014486	ENSSHAG00000012671	ENSSHAG00000025066	SNX31 (ENSSHAG00000010486)	ANKRD46 (ENSSHAG00000023496)	RNF19A (ENSSHAG00000007661)	ENSSHAG00000025709	SPAG1 (ENSSHAG00000006506)	POLR2K (ENSSHAG00000022682)	FBXO43 (ENSSHAG00000026851) ##22	RGS22 (ENSSHAG00000000912)	ENSSHAG00000006581	VPS13B (ENSSHAG00000030906)	OSR2 (ENSSHAG00000007793)	STK3 (ENSSHAG00000029839)	KCNS2 (ENSSHAG00000029074)	NIPAL2 (ENSSHAG00000004100)	POP1 (ENSSHAG00000000296)	ENSSHAG00000001004	ENSSHAG00000023594	MATN2 (ENSSHAG00000004130)	LAPTM4B (ENSSHAG00000002018)	MTDH (ENSSHAG00000000065)	CPQ (ENSSHAG00000009615)	SDC2 (ENSSHAG00000008389)
Opossum	MODERN SPECIES	2	KLF10 (ENSMODG00000005896)	ODF1 (ENSMODG00000005901)	UBR5 (ENSMODG00000005976)	RRM2B (ENSMODG00000005993)	NCALD (ENSMODG00000006010)	GRHL2 (ENSMODG00000006048)	ENSMODG00000006054	ENSMODG00000048967	ENSMODG00000006158	ENSMODG00000006222	SNX31 (ENSMODG00000006262)	ANKRD46 (ENSMODG00000006275)	RNF19A (ENSMODG00000006288)	SPAG1 (ENSMODG00000051124)	POLR2K (ENSMODG00000050878)	FBXO43 (ENSMODG00000006320) ##22	RGS22 (ENSMODG00000006332)	ENSMODG00000006336	VPS13B (ENSMODG00000006415)	ENSMODG00000037594	ENSMODG00000040637	STK3 (ENSMODG00000006474)	KCNS2 (ENSMODG00000006520)	NIPAL2 (ENSMODG00000006534)	POP1 (ENSMODG00000006561)	RIDA (ENSMODG00000006575)	ENSMODG00000027679	ENSMODG00000006778	ENSMODG00000006804	MATN2 (ENSMODG00000006840)	LAPTM4B (ENSMODG00000006848)
Eutheria	ANCESTRAL SPECIES	15	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Boreoeutheria	ANCESTRAL SPECIES	19	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00900000143156	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00960000187108	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a
Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.a	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j.b	ENSGT00960000187108	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a
Primates	ANCESTRAL SPECIES	20	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000158862	ENSGT00390000002944.f	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.a.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00390000010391.w.b	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Hominidae	ANCESTRAL SPECIES	15	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00390000002944.f	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00390000010391.w.b	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000158862	ENSGT00390000002944.f	ENSGT00940000155788	ENSGT00390000003465.b.b.p	ENSGT01090000260040.a.a.b	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b.o.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00390000010391.w.b	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000166912	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071
Gorilla	MODERN SPECIES	21	UBR5 (ENSGGOG00000003058)	ENSGGOG00000040864	RRM2B (ENSGGOG00000003053)	ENSGGOG00000022704	NCALD (ENSGGOG00000021945)	GRHL2 (ENSGGOG00000004401)	ENSGGOG00000025511	ZNF706 (ENSGGOG00000043557)	ENSGGOG00000022133	PABPC1 (ENSGGOG00000006785)	SNX31 (ENSGGOG00000023807)	ANKRD46 (ENSGGOG00000012039)	RNF19A (ENSGGOG00000026234)	SPAG1 (ENSGGOG00000010949)	POLR2K (ENSGGOG00000024539)	FBXO43 (ENSGGOG00000000296) ##22	RGS22 (ENSGGOG00000039315)	COX6C (ENSGGOG00000013771)	VPS13B (ENSGGOG00000034850)	ENSGGOG00000039991	ENSGGOG00000006716	ENSGGOG00000025398	STK3 (ENSGGOG00000034989)	KCNS2 (ENSGGOG00000002797)	ENSGGOG00000028028	NIPAL2 (ENSGGOG00000002387)	POP1 (ENSGGOG00000003176)	RIDA (ENSGGOG00000001185)	ERICH5 (ENSGGOG00000001184)	RPL30 (ENSGGOG00000005502)	ENSGGOG00000037587
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000158862	ENSGT00390000002944.f	ENSGT00940000155788	ENSGT00390000003465.b.b.p	ENSGT01090000260040.a.a.b	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b.o.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00390000010391.w.b	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000166912	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Pan	ANCESTRAL SPECIES	11	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00390000002944.f	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b.o.a	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000166912	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Bonobo	MODERN SPECIES	21	ODF1 (ENSPPAG00000038012)	UBR5 (ENSPPAG00000040534)	RRM2B (ENSPPAG00000029998)	NCALD (ENSPPAG00000038921)	GRHL2 (ENSPPAG00000042743)	ENSPPAG00000003654	ENSPPAG00000027115	ENSPPAG00000038734	ENSPPAG00000037498	SNX31 (ENSPPAG00000037934)	ANKRD46 (ENSPPAG00000028250)	RNF19A (ENSPPAG00000034676)	ENSPPAG00000033843	SPAG1 (ENSPPAG00000025949)	POLR2K (ENSPPAG00000040441)	FBXO43 (ENSPPAG00000029949) ##22	RGS22 (ENSPPAG00000012382)	COX6C (ENSPPAG00000042115)	VPS13B (ENSPPAG00000033105)	ENSPPAG00000032547	ENSPPAG00000040796	STK3 (ENSPPAG00000040970)	KCNS2 (ENSPPAG00000004420)	ENSPPAG00000036120	NIPAL2 (ENSPPAG00000021828)	POP1 (ENSPPAG00000018410)	RIDA (ENSPPAG00000029672)	ERICH5 (ENSPPAG00000044093)	RPL30 (ENSPPAG00000038382)	ENSPPAG00000028070	MATN2 (ENSPPAG00000034929)
Chimpanzee	MODERN SPECIES	21	UBR5 (ENSPTRG00000020482)	RRM2B (ENSPTRG00000020481)	NCALD (ENSPTRG00000052014)	ENSPTRG00000049988	GRHL2 (ENSPTRG00000020479)	ENSPTRG00000043738	ZNF706 (ENSPTRG00000051229)	ENSPTRG00000048115	PABPC1 (ENSPTRG00000047939)	SNX31 (ENSPTRG00000020474)	ANKRD46 (ENSPTRG00000020473)	RNF19A (ENSPTRG00000020472)	ENSPTRG00000046118	SPAG1 (ENSPTRG00000020471)	POLR2K (ENSPTRG00000020470)	FBXO43 (ENSPTRG00000020469) ##22	RGS22 (ENSPTRG00000020468)	COX6C (ENSPTRG00000020467)	ENSPTRG00000044726	VPS13B (ENSPTRG00000020464)	OSR2 (ENSPTRG00000020463)	ENSPTRG00000046155	STK3 (ENSPTRG00000020462)	KCNS2 (ENSPTRG00000039728)	ENSPTRG00000044772	NIPAL2 (ENSPTRG00000045973)	POP1 (ENSPTRG00000020458)	RIDA (ENSPTRG00000020457)	ERICH5 (ENSPTRG00000020456)	RPL30 (ENSPTRG00000020454)	ENSPTRG00000044251
Human	MODERN SPECIES	20	AZIN1 (ENSG00000155096)	KLF10 (ENSG00000155090)	ODF1 (ENSG00000155087)	UBR5 (ENSG00000104517)	RRM2B (ENSG00000048392)	NCALD (ENSG00000104490)	GRHL2 (ENSG00000083307)	ZNF706 (ENSG00000120963)	YWHAZ (ENSG00000164924)	PABPC1 (ENSG00000070756)	SNX31 (ENSG00000174226)	ANKRD46 (ENSG00000186106)	RNF19A (ENSG00000034677)	SPAG1 (ENSG00000104450)	POLR2K (ENSG00000147669)	FBXO43 (ENSG00000156509) ##22	RGS22 (ENSG00000132554)	COX6C (ENSG00000164919)	VPS13B (ENSG00000132549)	OSR2 (ENSG00000164920)	KCNS2 (ENSG00000156486)	STK3 (ENSG00000104375)	NIPAL2 (ENSG00000104361)	POP1 (ENSG00000104356)	RIDA (ENSG00000132541)	ERICH5 (ENSG00000177459)	RPL30 (ENSG00000156482)	MATN2 (ENSG00000132561)	LAPTM4B (ENSG00000104341)	MTDH (ENSG00000147649)	TSPYL5 (ENSG00000180543)
Orangutan	MODERN SPECIES	21	ODF1 (ENSPPYG00000018799)	UBR5 (ENSPPYG00000018797)	RRM2B (ENSPPYG00000018796)	NCALD (ENSPPYG00000018795)	GRHL2 (ENSPPYG00000018794)	ENSPPYG00000033958	ENSPPYG00000035143	ENSPPYG00000018792	YWHAZ (ENSPPYG00000018791)	PABPC1 (ENSPPYG00000018790)	SNX31 (ENSPPYG00000018789)	ANKRD46 (ENSPPYG00000018788)	RNF19A (ENSPPYG00000039695)	SPAG1 (ENSPPYG00000018787)	POLR2K (ENSPPYG00000018786)	FBXO43 (ENSPPYG00000018785) ##22	RGS22 (ENSPPYG00000018784)	COX6C (ENSPPYG00000030699)	VPS13B (ENSPPYG00000018782)	ENSPPYG00000018781	STK3 (ENSPPYG00000018780)	KCNS2 (ENSPPYG00000018779)	NIPAL2 (ENSPPYG00000018778)	POP1 (ENSPPYG00000018777)	RIDA (ENSPPYG00000018776)	ERICH5 (ENSPPYG00000018775)	RPL30 (ENSPPYG00000018774)	MATN2 (ENSPPYG00000018773)	ENSPPYG00000018772	ENSPPYG00000038790	ENSPPYG00000018771
Gibbon	MODERN SPECIES	6	ENSNLEG00000030326	NCALD (ENSNLEG00000003344)	ENSNLEG00000030983	GRHL2 (ENSNLEG00000003271)	ENSNLEG00000018390	ZNF706 (ENSNLEG00000003260)	YWHAZ (ENSNLEG00000030006)	ENSNLEG00000003142	SNX31 (ENSNLEG00000003099)	ANKRD46 (ENSNLEG00000028498)	ENSNLEG00000029724	RNF19A (ENSNLEG00000003030)	ENSNLEG00000030526	SPAG1 (ENSNLEG00000002998)	ENSNLEG00000002993	FBXO43 (ENSNLEG00000002980) ##22	RGS22 (ENSNLEG00000002877)	COX6C (ENSNLEG00000002864)	ENSNLEG00000029708	ENSNLEG00000002742	ENSNLEG00000002725	ENSNLEG00000027654	STK3 (ENSNLEG00000002668)	ENSNLEG00000030963	NIPAL2 (ENSNLEG00000002626)	POP1 (ENSNLEG00000002541)	RIDA (ENSNLEG00000027254)	ERICH5 (ENSNLEG00000002460)	ASPH (ENSNLEG00000002208)	CLVS1 (ENSNLEG00000002146)	ENSNLEG00000002143
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008
Vervet Monkey	MODERN SPECIES	27	KLF10 (ENSCSAG00000011934)	ODF1 (ENSCSAG00000011938)	UBR5 (ENSCSAG00000011959)	RRM2B (ENSCSAG00000011973)	ENSCSAG00000018603	NCALD (ENSCSAG00000011979)	GRHL2 (ENSCSAG00000011989)	ZNF706 (ENSCSAG00000011997)	YWHAZ (ENSCSAG00000012007)	PABPC1 (ENSCSAG00000012017)	SNX31 (ENSCSAG00000012041)	ANKRD46 (ENSCSAG00000012085)	RNF19A (ENSCSAG00000012091)	SPAG1 (ENSCSAG00000012110)	POLR2K (ENSCSAG00000012163)	FBXO43 (ENSCSAG00000012174) ##22	RGS22 (ENSCSAG00000012276)	VPS13B (ENSCSAG00000012302)	OSR2 (ENSCSAG00000012312)	STK3 (ENSCSAG00000012319)	KCNS2 (ENSCSAG00000018602)	NIPAL2 (ENSCSAG00000012328)	POP1 (ENSCSAG00000012340)	ERICH5 (ENSCSAG00000012345)	RPL30 (ENSCSAG00000012353)	MATN2 (ENSCSAG00000012367)	LAPTM4B (ENSCSAG00000012372)	MTDH (ENSCSAG00000012378)	ENSCSAG00000018600	TSPYL5 (ENSCSAG00000018598)	CPQ (ENSCSAG00000012387)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00390000011196.f	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071
Macaca	ANCESTRAL SPECIES	14	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00390000011196.f	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000158854	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00910000147071
Pig-tailed macaque	MODERN SPECIES	535	KLF10 (ENSMNEG00000032838)	ODF1 (ENSMNEG00000040981)	UBR5 (ENSMNEG00000028834)	ENSMNEG00000039535	NCALD (ENSMNEG00000029033)	GRHL2 (ENSMNEG00000038814)	ENSMNEG00000034441	ZNF706 (ENSMNEG00000029722)	ENSMNEG00000041365	PABPC1 (ENSMNEG00000009340)	SNX31 (ENSMNEG00000041333)	ANKRD46 (ENSMNEG00000032302)	RNF19A (ENSMNEG00000030685)	SPAG1 (ENSMNEG00000028691)	ENSMNEG00000042506	FBXO43 (ENSMNEG00000036160) ##22	RGS22 (ENSMNEG00000043087)	COX6C (ENSMNEG00000030335)	VPS13B (ENSMNEG00000029094)	ENSMNEG00000034864	OSR2 (ENSMNEG00000028787)	ENSMNEG00000036946	STK3 (ENSMNEG00000028293)	KCNS2 (ENSMNEG00000023430)	NIPAL2 (ENSMNEG00000036093)	POP1 (ENSMNEG00000036870)	ENSMNEG00000038879	ERICH5 (ENSMNEG00000036206)	ENSMNEG00000037277	MATN2 (ENSMNEG00000040955)	ENSMNEG00000042996
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b.t.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00390000011196.f	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT01030000234916
Olive baboon	MODERN SPECIES	18	ENSPANG00000046286	ENSPANG00000044594	ENSPANG00000040788	ENSPANG00000020171	ENSPANG00000010317	ENSPANG00000000142	ENSPANG00000050505	ENSPANG00000048393	ENSPANG00000041498	PABPC1 (ENSPANG00000010645)	SNX31 (ENSPANG00000018545)	ANKRD46 (ENSPANG00000000325)	RNF19A (ENSPANG00000021913)	SPAG1 (ENSPANG00000018546)	POLR2K (ENSPANG00000031381)	FBXO43 (ENSPANG00000006694) ##22	ENSPANG00000047102	RGS22 (ENSPANG00000006695)	ENSPANG00000037459	COX6C (ENSPANG00000031090)	ENSPANG00000042660	VPS13B (ENSPANG00000007131)	OSR2 (ENSPANG00000012764)	ENSPANG00000018676	ENSPANG00000040621	STK3 (ENSPANG00000018589)	KCNS2 (ENSPANG00000024000)	NIPAL2 (ENSPANG00000005207)	POP1 (ENSPANG00000009704)	RIDA (ENSPANG00000030103)	ERICH5 (ENSPANG00000006288)
Cercopithecinae_d	ANCESTRAL SPECIES	92	ENSGT00390000013305.a.b	ENSGT00940000154295.y.a.a	ENSGT00940000158862	ENSGT00940000155788	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b.t.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00390000011196.f	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00910000147071
Drill	MODERN SPECIES	1507											ENSMLEG00000033568	ANKRD46 (ENSMLEG00000037450)	RNF19A (ENSMLEG00000033564)	SPAG1 (ENSMLEG00000032957)	ENSMLEG00000038200	FBXO43 (ENSMLEG00000030635) ##22	RGS22 (ENSMLEG00000022615)	ENSMLEG00000039839	COX6C (ENSMLEG00000034839)	ENSMLEG00000029977
Sooty mangabey	MODERN SPECIES	658	KLF10 (ENSCATG00000042287)	ODF1 (ENSCATG00000040837)	UBR5 (ENSCATG00000035969)	RRM2B (ENSCATG00000026045)	NCALD (ENSCATG00000043115)	GRHL2 (ENSCATG00000023707)	ENSCATG00000032859	ZNF706 (ENSCATG00000031731)	ENSCATG00000024186	PABPC1 (ENSCATG00000039184)	SNX31 (ENSCATG00000035665)	ANKRD46 (ENSCATG00000035515)	RNF19A (ENSCATG00000037706)	SPAG1 (ENSCATG00000037794)	POLR2K (ENSCATG00000007143)	FBXO43 (ENSCATG00000040501) ##22	RGS22 (ENSCATG00000037557)	COX6C (ENSCATG00000041529)	VPS13B (ENSCATG00000035674)	OSR2 (ENSCATG00000044939)	ENSCATG00000001750	STK3 (ENSCATG00000026061)	KCNS2 (ENSCATG00000017758)	NIPAL2 (ENSCATG00000036767)	POP1 (ENSCATG00000040916)	ENSCATG00000035684	ERICH5 (ENSCATG00000032257)	RPL30 (ENSCATG00000027534)	ENSCATG00000026374	MATN2 (ENSCATG00000015517)	ENSCATG00000030012
Rhinopithecus	ANCESTRAL SPECIES	71	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000002944.f	ENSGT00440000033468.c.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b.u	ENSGT00940000153773.a.b.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000163468	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.q.e	ENSGT00960000187108	ENSGT00390000012138.a.b.t	ENSGT00910000147071	ENSGT00940000158008	ENSGT00550000074784.a.b
Black snub-nosed monkey	MODERN SPECIES	2000	UBR5 (ENSRBIG00000038821)	ENSRBIG00000002104	RRM2B (ENSRBIG00000032299)	NCALD (ENSRBIG00000044706)	GRHL2 (ENSRBIG00000023592)	ENSRBIG00000040580	ENSRBIG00000033733	ZNF706 (ENSRBIG00000017868)	ENSRBIG00000035734	ENSRBIG00000029759	SNX31 (ENSRBIG00000037977)	ANKRD46 (ENSRBIG00000043708)	RNF19A (ENSRBIG00000042666)	SPAG1 (ENSRBIG00000033092)	ENSRBIG00000035082	FBXO43 (ENSRBIG00000032986) ##22
Golden snub-nosed monkey	MODERN SPECIES	1779				NCALD (ENSRROG00000044296)	ENSRROG00000030696	GRHL2 (ENSRROG00000007872)	ENSRROG00000035017	ZNF706 (ENSRROG00000033465)	ENSRROG00000032856	ENSRROG00000042796	SNX31 (ENSRROG00000035914)	ANKRD46 (ENSRROG00000043205)	RNF19A (ENSRROG00000034781)	SPAG1 (ENSRROG00000040225)	ENSRROG00000043844	FBXO43 (ENSRROG00000043955) ##22	RGS22 (ENSRROG00000037971)
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b.s	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00390000010391.w.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.a.a.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Cebidae	ANCESTRAL SPECIES	19	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00390000010391.w.b	ENSGT00940000164643	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.a.a.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Cebidae_a	ANCESTRAL SPECIES	120									ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00390000010391.w.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.a.a.a.a
Bolivian squirrel monkey	MODERN SPECIES	214								ENSSBOG00000031022	PABPC1 (ENSSBOG00000022216)	SNX31 (ENSSBOG00000024845)	ANKRD46 (ENSSBOG00000024414)	RNF19A (ENSSBOG00000035134)	SPAG1 (ENSSBOG00000029976)	ENSSBOG00000029490	ENSSBOG00000022710	FBXO43 (ENSSBOG00000027482) ##22	RGS22 (ENSSBOG00000023420)	ENSSBOG00000022499	ENSSBOG00000024423	VPS13B (ENSSBOG00000027822)	OSR2 (ENSSBOG00000035052)	STK3 (ENSSBOG00000027109)	KCNS2 (ENSSBOG00000018618)	NIPAL2 (ENSSBOG00000026543)	POP1 (ENSSBOG00000020830)	ENSSBOG00000022742	ERICH5 (ENSSBOG00000029799)	RPL30 (ENSSBOG00000031109)	MATN2 (ENSSBOG00000002029)	ENSSBOG00000032260
Capuchin	MODERN SPECIES	331													RNF19A (ENSCCAG00000028958)	SPAG1 (ENSCCAG00000027750)	ENSCCAG00000019633	FBXO43 (ENSCCAG00000019811) ##22	RGS22 (ENSCCAG00000026508)	COX6C (ENSCCAG00000033132)	VPS13B (ENSCCAG00000032804)	OSR2 (ENSCCAG00000034941)	ENSCCAG00000029710	ENSCCAG00000001352	STK3 (ENSCCAG00000025276)	KCNS2 (ENSCCAG00000032229)	NIPAL2 (ENSCCAG00000000911)	POP1 (ENSCCAG00000018939)	RIDA (ENSCCAG00000023149)	ERICH5 (ENSCCAG00000028817)	RPL30 (ENSCCAG00000027523)	MATN2 (ENSCCAG00000029967)	ENSCCAG00000029765
Marmoset	MODERN SPECIES	7	NCALD (ENSCJAG00000062445)	GRHL2 (ENSCJAG00000015886)	ENSCJAG00000053333	ZNF706 (ENSCJAG00000039779)	YWHAZ (ENSCJAG00000015844)	ENSCJAG00000085316	PABPC1 (ENSCJAG00000015833)	SNX31 (ENSCJAG00000015820)	ANKRD46 (ENSCJAG00000015816)	ENSCJAG00000067452	ENSCJAG00000079952	RNF19A (ENSCJAG00000015794)	ENSCJAG00000066551	SPAG1 (ENSCJAG00000015770)	ENSCJAG00000080456	FBXO43 (ENSCJAG00000015760) ##22	RGS22 (ENSCJAG00000015721)	ENSCJAG00000076638	VPS13B (ENSCJAG00000015651)	OSR2 (ENSCJAG00000015627)	STK3 (ENSCJAG00000015597)	KCNS2 (ENSCJAG00000045971)	NIPAL2 (ENSCJAG00000040562)	POP1 (ENSCJAG00000015567)	RIDA (ENSCJAG00000015560)	ERICH5 (ENSCJAG00000015555)	ENSCJAG00000015549	MATN2 (ENSCJAG00000015501)	ENSCJAG00000069717	ENSCJAG00000082247	MTDH (ENSCJAG00000005059)
Mas night monkey	MODERN SPECIES	857	UBR5 (ENSANAG00000032305)	RRM2B (ENSANAG00000036526)	ENSANAG00000021053	ENSANAG00000021418	NCALD (ENSANAG00000004991)	GRHL2 (ENSANAG00000030068)	ZNF706 (ENSANAG00000030246)	ENSANAG00000027160	PABPC1 (ENSANAG00000033352)	SNX31 (ENSANAG00000033471)	ANKRD46 (ENSANAG00000033967)	RNF19A (ENSANAG00000030347)	SPAG1 (ENSANAG00000028676)	ENSANAG00000035009	ENSANAG00000030050	FBXO43 (ENSANAG00000021154) ##22	RGS22 (ENSANAG00000036785)	COX6C (ENSANAG00000030830)	VPS13B (ENSANAG00000019941)	ENSANAG00000019944	OSR2 (ENSANAG00000034242)	STK3 (ENSANAG00000028447)	ENSANAG00000023767	KCNS2 (ENSANAG00000008286)	NIPAL2 (ENSANAG00000031601)	POP1 (ENSANAG00000026360)	RIDA (ENSANAG00000024491)	ERICH5 (ENSANAG00000037689)	ENSANAG00000035820	MATN2 (ENSANAG00000032694)
Tarsier	MODERN SPECIES	5801													RNF19A (ENSTSYG00000029101)	SPAG1 (ENSTSYG00000000424)	POLR2K (ENSTSYG00000003640)	FBXO43 (ENSTSYG00000008181) ##22	RGS22 (ENSTSYG00000008139)	ENSTSYG00000000843	ENSTSYG00000029453	VPS13B (ENSTSYG00000002291)
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00730000111146.p	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Lemuriformes_a	ANCESTRAL SPECIES	46	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT00940000169819	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00960000187108	ENSGT00730000111146.p	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Coquerels sifaka	MODERN SPECIES	288	KLF10 (ENSPCOG00000013939)	ODF1 (ENSPCOG00000024654)	UBR5 (ENSPCOG00000014399)	RRM2B (ENSPCOG00000003459)	NCALD (ENSPCOG00000002430)	GRHL2 (ENSPCOG00000003815)	ENSPCOG00000028386	ZNF706 (ENSPCOG00000028713)	YWHAZ (ENSPCOG00000027987)	PABPC1 (ENSPCOG00000020234)	SNX31 (ENSPCOG00000017253)	ENSPCOG00000028413	RNF19A (ENSPCOG00000003000)	SPAG1 (ENSPCOG00000021388)	ENSPCOG00000019331	FBXO43 (ENSPCOG00000022956) ##22	RGS22 (ENSPCOG00000018902)	COX6C (ENSPCOG00000028763)	VPS13B (ENSPCOG00000027260)	OSR2 (ENSPCOG00000026580)	STK3 (ENSPCOG00000021841)	KCNS2 (ENSPCOG00000003471)	NIPAL2 (ENSPCOG00000015818)	POP1 (ENSPCOG00000019420)	ENSPCOG00000014936	ENSPCOG00000013438	ENSPCOG00000022716	RPL30 (ENSPCOG00000016608)	MATN2 (ENSPCOG00000028802)	LAPTM4B (ENSPCOG00000024247)	MTDH (ENSPCOG00000014642)
Greater bamboo lemur	MODERN SPECIES	13			RRM2B (ENSPSMG00000012857)	NCALD (ENSPSMG00000012837)	GRHL2 (ENSPSMG00000012819)	ENSPSMG00000012800	ENSPSMG00000012798	ENSPSMG00000012795	ENSPSMG00000012736	PABPC1 (ENSPSMG00000012609)	SNX31 (ENSPSMG00000012537)	ANKRD46 (ENSPSMG00000012518)	RNF19A (ENSPSMG00000012490)	SPAG1 (ENSPSMG00000012471)	POLR2K (ENSPSMG00000012451)	FBXO43 (ENSPSMG00000012438) ##22	RGS22 (ENSPSMG00000012424)	ENSPSMG00000012355	VPS13B (ENSPSMG00000012326)	OSR2 (ENSPSMG00000012178)	STK3 (ENSPSMG00000012165)	KCNS2 (ENSPSMG00000012114)	NIPAL2 (ENSPSMG00000012103)	POP1 (ENSPSMG00000012091)	RIDA (ENSPSMG00000012066)	ENSPSMG00000012047	ENSPSMG00000012039	ENSPSMG00000012033	MATN2 (ENSPSMG00000011943)	LAPTM4B (ENSPSMG00000011676)	MTDH (ENSPSMG00000011621)
Mouse lemur	MODERN SPECIES	31	KLF10 (ENSMICG00000037141)	ODF1 (ENSMICG00000005796)	UBR5 (ENSMICG00000014824)	RRM2B (ENSMICG00000033193)	NCALD (ENSMICG00000045417)	GRHL2 (ENSMICG00000014771)	ENSMICG00000034184	ENSMICG00000045227	ENSMICG00000034946	PABPC1 (ENSMICG00000009121)	SNX31 (ENSMICG00000010234)	ANKRD46 (ENSMICG00000038072)	RNF19A (ENSMICG00000034867)	SPAG1 (ENSMICG00000007495)	POLR2K (ENSMICG00000044624)	FBXO43 (ENSMICG00000041879) ##22	RGS22 (ENSMICG00000038466)	ENSMICG00000004456	VPS13B (ENSMICG00000004392)	OSR2 (ENSMICG00000004390)	STK3 (ENSMICG00000004379)	KCNS2 (ENSMICG00000047216)	NIPAL2 (ENSMICG00000004367)	ENSMICG00000038757	POP1 (ENSMICG00000004361)	ENSMICG00000046083	ERICH5 (ENSMICG00000043438)	ENSMICG00000036228	RPL30 (ENSMICG00000004620)	MATN2 (ENSMICG00000006923)	ENSMICG00000044005
Bushbaby	MODERN SPECIES	119	KLF10 (ENSOGAG00000014528)	ODF1 (ENSOGAG00000014525)	UBR5 (ENSOGAG00000004491)	RRM2B (ENSOGAG00000004487)	NCALD (ENSOGAG00000034513)	GRHL2 (ENSOGAG00000004751)	ENSOGAG00000032973	ENSOGAG00000027151	ENSOGAG00000033497	PABPC1 (ENSOGAG00000007921)	SNX31 (ENSOGAG00000012237)	ANKRD46 (ENSOGAG00000012234)	RNF19A (ENSOGAG00000007137)	ENSOGAG00000008426	ENSOGAG00000008422	FBXO43 (ENSOGAG00000008418) ##22	RGS22 (ENSOGAG00000008411)	VPS13B (ENSOGAG00000007929)	ENSOGAG00000034274	OSR2 (ENSOGAG00000007928)	STK3 (ENSOGAG00000016347)	KCNS2 (ENSOGAG00000029674)	NIPAL2 (ENSOGAG00000024518)	POP1 (ENSOGAG00000001466)	ENSOGAG00000001465	ERICH5 (ENSOGAG00000001464)	MATN2 (ENSOGAG00000000513)	ENSOGAG00000000512	MTDH (ENSOGAG00000002065)	TSPYL5 (ENSOGAG00000025044)	CPQ (ENSOGAG00000014871)
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Glires	ANCESTRAL SPECIES	20	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Rodentia	ANCESTRAL SPECIES	19	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Muroidea	ANCESTRAL SPECIES	14	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Northern American deer mouse	MODERN SPECIES	12	Odf1 (ENSPEMG00000023346)	Ubr5 (ENSPEMG00000020823)	Rrm2b (ENSPEMG00000008451)	ENSPEMG00000014682	Ncald (ENSPEMG00000027351)	Grhl2 (ENSPEMG00000010802)	Zfp706 (ENSPEMG00000027958)	ENSPEMG00000021714	ENSPEMG00000014998	Snx31 (ENSPEMG00000012435)	Ankrd46 (ENSPEMG00000028516)	ENSPEMG00000026775	Rnf19a (ENSPEMG00000010959)	Spag1 (ENSPEMG00000010823)	ENSPEMG00000012015	Fbxo43 (ENSPEMG00000009599) ##22	Rgs22 (ENSPEMG00000001987)	ENSPEMG00000023434	Vps13b (ENSPEMG00000021894)	ENSPEMG00000022768	Osr2 (ENSPEMG00000023942)	ENSPEMG00000022099	Kcns2 (ENSPEMG00000030882)	Nipal2 (ENSPEMG00000022571)	Pop1 (ENSPEMG00000023633)	Rida (ENSPEMG00000021792)	Erich5 (ENSPEMG00000021961)	ENSPEMG00000022132	Matn2 (ENSPEMG00000022322)	ENSPEMG00000031351	Laptm4b (ENSPEMG00000021641)
Prairie vole	MODERN SPECIES	112	Azin1 (ENSMOCG00000002805)	Klf10 (ENSMOCG00000016358)	Odf1 (ENSMOCG00000003072)	Ubr5 (ENSMOCG00000019809)	Rrm2b (ENSMOCG00000004169)	Ncald (ENSMOCG00000017199)	Grhl2 (ENSMOCG00000001176)	Zfp706 (ENSMOCG00000008648)	ENSMOCG00000006605	ENSMOCG00000018191	Snx31 (ENSMOCG00000009981)	Ankrd46 (ENSMOCG00000009913)	Rnf19a (ENSMOCG00000003595)	Spag1 (ENSMOCG00000003182)	Polr2k (ENSMOCG00000009880)	Fbxo43 (ENSMOCG00000019801) ##22	Rgs22 (ENSMOCG00000008860)	Cox6c (ENSMOCG00000021318)	Vps13b (ENSMOCG00000019739)	Osr2 (ENSMOCG00000003261)	Stk3 (ENSMOCG00000012460)	Kcns2 (ENSMOCG00000001182)	Nipal2 (ENSMOCG00000019111)	Pop1 (ENSMOCG00000006356)	Rida (ENSMOCG00000014887)	Erich5 (ENSMOCG00000015882)	Rpl30 (ENSMOCG00000006624)	Matn2 (ENSMOCG00000002507)	Laptm4b (ENSMOCG00000019392)	Mtdh (ENSMOCG00000008389)	Tspyl5 (ENSMOCG00000021860)
Cricetinae	ANCESTRAL SPECIES	38	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110
Chinese hamster chok1gshd	MODERN SPECIES	207	Azin1 (ENSCGRG00001002023)	Klf10 (ENSCGRG00001015251)	Odf1 (ENSCGRG00001015547)	Ubr5 (ENSCGRG00001002960)	ENSCGRG00001002761	Ncald (ENSCGRG00001004067)	Grhl2 (ENSCGRG00001011532)	Zfp706 (ENSCGRG00001011764)	ENSCGRG00001014131	ENSCGRG00001015235	ENSCGRG00001022067	Snx31 (ENSCGRG00001007695)	Ankrd46 (ENSCGRG00001011445)	Rnf19a (ENSCGRG00001012317)	Spag1 (ENSCGRG00001013037)	Fbxo43 (ENSCGRG00001022414) ##22	Rgs22 (ENSCGRG00001023210)	Cox6c (ENSCGRG00001001774)	Vps13b (ENSCGRG00001019154)	Osr2 (ENSCGRG00001011416)	Stk3 (ENSCGRG00001014280)	Kcns2 (ENSCGRG00001014130)	Nipal2 (ENSCGRG00001015512)	Pop1 (ENSCGRG00001017308)	Rida (ENSCGRG00001019905)	Rpl30 (ENSCGRG00001020021)	Matn2 (ENSCGRG00001022796)	Laptm4b (ENSCGRG00001006505)	Mtdh (ENSCGRG00001010894)	Tspyl5 (ENSCGRG00001012646)	ENSCGRG00001013803
Golden Hamster	MODERN SPECIES	651	Odf1 (ENSMAUG00000009381)	Ubr5 (ENSMAUG00000018902)	Rrm2b (ENSMAUG00000018657)	Ncald (ENSMAUG00000000793)	ENSMAUG00000005244	ENSMAUG00000000279	Zfp706 (ENSMAUG00000000628)	Ywhaz (ENSMAUG00000001602)	ENSMAUG00000008936	ENSMAUG00000003523	Snx31 (ENSMAUG00000014120)	Ankrd46 (ENSMAUG00000012258)	Rnf19a (ENSMAUG00000010432)	Spag1 (ENSMAUG00000003740)	Polr2k (ENSMAUG00000010288)	Fbxo43 (ENSMAUG00000011238) ##22	Rgs22 (ENSMAUG00000005717)	Vps13b (ENSMAUG00000013877)	Osr2 (ENSMAUG00000010756)	Stk3 (ENSMAUG00000016665)	Kcns2 (ENSMAUG00000016680)	Nipal2 (ENSMAUG00000012882)	ENSMAUG00000016175	Pop1 (ENSMAUG00000017537)	Rida (ENSMAUG00000000274)	Rpl30 (ENSMAUG00000006886)	Matn2 (ENSMAUG00000000454)	Laptm4b (ENSMAUG00000014122)	Mtdh (ENSMAUG00000001085)	ENSMAUG00000002158	Tspyl5 (ENSMAUG00000007134)
Murinae	ANCESTRAL SPECIES	10	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Mus	ANCESTRAL SPECIES	11	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00860000135657	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT00860000135649	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00700000106136	ENSGT00390000012138.a.a.j.b	ENSGT00940000158008	ENSGT00940000153446.a.a
Mus_A	ANCESTRAL SPECIES	13	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00860000135657	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT00860000135649	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b.o.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00700000106136	ENSGT00390000012138.a.a.j.b	ENSGT00940000158008	ENSGT00940000153446.a.a.k
Mus_B	ANCESTRAL SPECIES	12	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00860000135657	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT00860000135649	ENSGT01090000260040.a.a.a.r	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b.o.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00700000106136	ENSGT00390000012138.a.a.j.b	ENSGT00940000158008	ENSGT00940000153446.a.a.k
Mouse	MODERN SPECIES	6	Azin1 (ENSMUSG00000037458)	Klf10 (ENSMUSG00000037465)	Odf1 (ENSMUSG00000061923)	Ubr5 (ENSMUSG00000037487)	Rrm2b (ENSMUSG00000022292)	Ncald (ENSMUSG00000051359)	Grhl2 (ENSMUSG00000022286)	Zfp706 (ENSMUSG00000062397)	Ywhaz (ENSMUSG00000022285)	Pabpc1 (ENSMUSG00000022283)	Snx31 (ENSMUSG00000013611)	Ankrd46 (ENSMUSG00000048307)	Rnf19a (ENSMUSG00000022280)	Spag1 (ENSMUSG00000037617)	Polr2k (ENSMUSG00000045996)	Fbxo43 (ENSMUSG00000048230) ##22	Rgs22 (ENSMUSG00000037627)	Cox6c (ENSMUSG00000014313)	Vps13b (ENSMUSG00000037646)	Osr2 (ENSMUSG00000022330)	Stk3 (ENSMUSG00000022329)	Kcns2 (ENSMUSG00000050963)	Nipal2 (ENSMUSG00000038879)	Pop1 (ENSMUSG00000022325)	Rida (ENSMUSG00000022323)	Erich5 (ENSMUSG00000044726)	Rpl30 (ENSMUSG00000058600)	9430069I07Rik (ENSMUSG00000094447)	Matn2 (ENSMUSG00000022324)	Laptm4b (ENSMUSG00000022257)	Mtdh (ENSMUSG00000022255)
Mus_C	ANCESTRAL SPECIES	28	ENSGT00390000013305.a.b	ENSGT00860000135657	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT00860000135649	ENSGT01090000260040.a.a.a.r	ENSGT00510000046985.i.b.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00390000008918.b.o.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a.k	ENSGT00940000154181.a	ENSGT00940000162862
spretus	MODERN SPECIES	6	Ubr5 (MGP_SPRETEiJ_G0020645)	Rrm2b (MGP_SPRETEiJ_G0020644)	MGP_SPRETEiJ_G0020643	Ncald (MGP_SPRETEiJ_G0020642)	Grhl2 (MGP_SPRETEiJ_G0020641)	Zfp706 (MGP_SPRETEiJ_G0020640)	MGP_SPRETEiJ_G0020639	Ywhaz (MGP_SPRETEiJ_G0020638)	MGP_SPRETEiJ_G0020637	Pabpc1 (MGP_SPRETEiJ_G0020636)	Snx31 (MGP_SPRETEiJ_G0020635)	Ankrd46 (MGP_SPRETEiJ_G0020634)	Rnf19a (MGP_SPRETEiJ_G0020633)	Spag1 (MGP_SPRETEiJ_G0020632)	Polr2k (MGP_SPRETEiJ_G0020631)	Fbxo43 (MGP_SPRETEiJ_G0020630) ##22	Rgs22 (MGP_SPRETEiJ_G0020629)	Cox6c (MGP_SPRETEiJ_G0020628)	Vps13b (MGP_SPRETEiJ_G0020627)	Osr2 (MGP_SPRETEiJ_G0020626)	Stk3 (MGP_SPRETEiJ_G0020625)	Kcns2 (MGP_SPRETEiJ_G0020624)	Nipal2 (MGP_SPRETEiJ_G0020623)	Pop1 (MGP_SPRETEiJ_G0020622)	Rida (MGP_SPRETEiJ_G0020621)	Erich5 (MGP_SPRETEiJ_G0020620)	Rpl30 (MGP_SPRETEiJ_G0020619)	MGP_SPRETEiJ_G0020618	Matn2 (MGP_SPRETEiJ_G0020617)	Laptm4b (MGP_SPRETEiJ_G0020616)	Mtdh (MGP_SPRETEiJ_G0020615)
Steppe mouse	MODERN SPECIES	3308	Ncald (ENSMSIG00000015269)	ENSMSIG00000015305	Grhl2 (ENSMSIG00000015315)	ENSMSIG00000015430	ENSMSIG00000015453	ENSMSIG00000015497	Ywhaz (ENSMSIG00000015504)	ENSMSIG00000015546	ENSMSIG00000015548	Pabpc1 (ENSMSIG00000015570)	Snx31 (ENSMSIG00000015612)	ENSMSIG00000015663	Rnf19a (ENSMSIG00000015703)	Spag1 (ENSMSIG00000015763)	ENSMSIG00000015808	Fbxo43 (ENSMSIG00000015840) ##22	Rgs22 (ENSMSIG00000015850)	ENSMSIG00000015927	Cox6c (ENSMSIG00000015963)	Vps13b (ENSMSIG00000016021)	Osr2 (ENSMSIG00000016289)	Stk3 (ENSMSIG00000016310)	Kcns2 (ENSMSIG00000016369)	Nipal2 (ENSMSIG00000016374)	Pop1 (ENSMSIG00000016402)	Rida (ENSMSIG00000016480)	Erich5 (ENSMSIG00000016520)	ENSMSIG00000016533	Matn2 (ENSMSIG00000016562)	9430069I07Rik (ENSMSIG00000016655)	Laptm4b (ENSMSIG00000016687)
Ryukyu mouse	MODERN SPECIES	6	Odf1 (MGP_CAROLIEiJ_G0019749)	Ubr5 (MGP_CAROLIEiJ_G0019748)	Rrm2b (MGP_CAROLIEiJ_G0019747)	MGP_CAROLIEiJ_G0019746	Ncald (MGP_CAROLIEiJ_G0019745)	Grhl2 (MGP_CAROLIEiJ_G0019744)	Zfp706 (MGP_CAROLIEiJ_G0019743)	MGP_CAROLIEiJ_G0019742	Ywhaz (MGP_CAROLIEiJ_G0019741)	Pabpc1 (MGP_CAROLIEiJ_G0019740)	Snx31 (MGP_CAROLIEiJ_G0019739)	Ankrd46 (MGP_CAROLIEiJ_G0019738)	Rnf19a (MGP_CAROLIEiJ_G0019737)	Spag1 (MGP_CAROLIEiJ_G0019736)	Polr2k (MGP_CAROLIEiJ_G0019735)	Fbxo43 (MGP_CAROLIEiJ_G0019734) ##22	Rgs22 (MGP_CAROLIEiJ_G0019733)	Cox6c (MGP_CAROLIEiJ_G0019732)	Vps13b (MGP_CAROLIEiJ_G0019731)	Osr2 (MGP_CAROLIEiJ_G0019730)	Stk3 (MGP_CAROLIEiJ_G0019729)	Kcns2 (MGP_CAROLIEiJ_G0019728)	Nipal2 (MGP_CAROLIEiJ_G0019727)	Pop1 (MGP_CAROLIEiJ_G0019726)	Rida (MGP_CAROLIEiJ_G0019725)	Erich5 (MGP_CAROLIEiJ_G0019724)	Rpl30 (MGP_CAROLIEiJ_G0019723)	MGP_CAROLIEiJ_G0019722	Matn2 (MGP_CAROLIEiJ_G0019721)	Laptm4b (MGP_CAROLIEiJ_G0019720)	Mtdh (MGP_CAROLIEiJ_G0019719)
Shrew mouse	MODERN SPECIES	8	Odf1 (MGP_PahariEiJ_G0019758)	Ubr5 (MGP_PahariEiJ_G0019757)	Rrm2b (MGP_PahariEiJ_G0019756)	MGP_PahariEiJ_G0019755	Ncald (MGP_PahariEiJ_G0019754)	Grhl2 (MGP_PahariEiJ_G0019753)	Zfp706 (MGP_PahariEiJ_G0019752)	MGP_PahariEiJ_G0019751	MGP_PahariEiJ_G0019750	Pabpc1 (MGP_PahariEiJ_G0019749)	Snx31 (MGP_PahariEiJ_G0019748)	Ankrd46 (MGP_PahariEiJ_G0019747)	Rnf19a (MGP_PahariEiJ_G0019746)	Spag1 (MGP_PahariEiJ_G0019745)	MGP_PahariEiJ_G0019744	Fbxo43 (MGP_PahariEiJ_G0019743) ##22	Rgs22 (MGP_PahariEiJ_G0019742)	Cox6c (MGP_PahariEiJ_G0019741)	Vps13b (MGP_PahariEiJ_G0019740)	Osr2 (MGP_PahariEiJ_G0019739)	Stk3 (MGP_PahariEiJ_G0019738)	Kcns2 (MGP_PahariEiJ_G0019737)	Nipal2 (MGP_PahariEiJ_G0019736)	Pop1 (MGP_PahariEiJ_G0019735)	Rida (MGP_PahariEiJ_G0019734)	Erich5 (MGP_PahariEiJ_G0019733)	Rpl30 (MGP_PahariEiJ_G0019732)	MGP_PahariEiJ_G0019731	Matn2 (MGP_PahariEiJ_G0019730)	Laptm4b (MGP_PahariEiJ_G0019729)	Mtdh (MGP_PahariEiJ_G0019728)
Rat	MODERN SPECIES	17	ENSRNOG00000066702	Ubr5 (ENSRNOG00000006816)	Rrm2b (ENSRNOG00000025454)	Ncald (ENSRNOG00000042978)	Grhl2 (ENSRNOG00000007000)	Zfp706 (ENSRNOG00000060956)	Ywhaz (ENSRNOG00000008195)	LOC362901 (ENSRNOG00000031383)	Pabpc1 (ENSRNOG00000008639)	Snx31 (ENSRNOG00000025501)	Ankrd46 (ENSRNOG00000025504)	Rnf19a (ENSRNOG00000009658)	ENSRNOG00000064780	Spag1 (ENSRNOG00000010078)	Polr2k (ENSRNOG00000010408)	Fbxo43 (ENSRNOG00000010459) ##22	ENSRNOG00000063604	Rgs22 (ENSRNOG00000025551)	RGD1565056 (ENSRNOG00000026873)	Cox6c (ENSRNOG00000010807)	Vps13b (ENSRNOG00000066252)	Osr2 (ENSRNOG00000011136)	Stk3 (ENSRNOG00000011278)	Kcns2 (ENSRNOG00000066111)	Nipal2 (ENSRNOG00000005190)	Pop1 (ENSRNOG00000005243)	Rida (ENSRNOG00000005437)	Erich5 (ENSRNOG00000005956)	Matn2 (ENSRNOG00000006060)	Laptm4b (ENSRNOG00000006766)	ENSRNOG00000068626
Upper Galilee mountains blind mole rat	MODERN SPECIES	760							Zfp706 (ENSNGAG00000012379)	ENSNGAG00000010111	ENSNGAG00000006289	ENSNGAG00000000996	Snx31 (ENSNGAG00000021124)	Ankrd46 (ENSNGAG00000018485)	Rnf19a (ENSNGAG00000006667)	Spag1 (ENSNGAG00000023969)	Polr2k (ENSNGAG00000020950)	Fbxo43 (ENSNGAG00000015827) ##22	Rgs22 (ENSNGAG00000022745)	Cox6c (ENSNGAG00000020308)	Vps13b (ENSNGAG00000013908)	Osr2 (ENSNGAG00000022766)	ENSNGAG00000021406	Kcns2 (ENSNGAG00000004621)	Nipal2 (ENSNGAG00000021423)	Pop1 (ENSNGAG00000001582)	Rida (ENSNGAG00000024030)	Erich5 (ENSNGAG00000013838)	ENSNGAG00000015276	Matn2 (ENSNGAG00000013927)	Laptm4b (ENSNGAG00000004954)	Mtdh (ENSNGAG00000011464)	ENSNGAG00000020936
Lesser Egyptian jerboa	MODERN SPECIES	96	Klf10 (ENSJJAG00000002095)	Odf1 (ENSJJAG00000004566)	Ubr5 (ENSJJAG00000013619)	Rrm2b (ENSJJAG00000015803)	Ncald (ENSJJAG00000017643)	Grhl2 (ENSJJAG00000021484)	Zfp706 (ENSJJAG00000000146)	ENSJJAG00000002258	ENSJJAG00000010886	ENSJJAG00000015918	Snx31 (ENSJJAG00000018446)	Ankrd46 (ENSJJAG00000001029)	Rnf19a (ENSJJAG00000012255)	Spag1 (ENSJJAG00000014363)	ENSJJAG00000000271	Fbxo43 (ENSJJAG00000007559) ##22	Rgs22 (ENSJJAG00000011143)	ENSJJAG00000019740	Vps13b (ENSJJAG00000017780)	Osr2 (ENSJJAG00000012336)	ENSJJAG00000012640	Stk3 (ENSJJAG00000019016)	Kcns2 (ENSJJAG00000021215)	Nipal2 (ENSJJAG00000000450)	ENSJJAG00000010693	Pop1 (ENSJJAG00000013325)	ENSJJAG00000020177	ENSJJAG00000021232	Matn2 (ENSJJAG00000022386)	ENSJJAG00000012241	ENSJJAG00000014247
Kangaroo rat	MODERN SPECIES	336	Azin1 (ENSDORG00000004402)	Klf10 (ENSDORG00000015269)	Odf1 (ENSDORG00000003568)	Ubr5 (ENSDORG00000007058)	Rrm2b (ENSDORG00000007056)	Ncald (ENSDORG00000025691)	Grhl2 (ENSDORG00000007051)	Zfp706 (ENSDORG00000015819)	Ywhaz (ENSDORG00000011156)	Pabpc1 (ENSDORG00000013935)	Snx31 (ENSDORG00000014406)	Ankrd46 (ENSDORG00000012247)	Rnf19a (ENSDORG00000000701)	Spag1 (ENSDORG00000000699)	Polr2k (ENSDORG00000028386)	Fbxo43 (ENSDORG00000000697) ##22	Cox6c (ENSDORG00000000009)	Vps13b (ENSDORG00000012357)	Osr2 (ENSDORG00000011823)	Stk3 (ENSDORG00000007089)	Kcns2 (ENSDORG00000007088)	Nipal2 (ENSDORG00000013257)	Pop1 (ENSDORG00000015384)	Rida (ENSDORG00000015382)	ENSDORG00000012384	ENSDORG00000026515	Matn2 (ENSDORG00000001226)	Laptm4b (ENSDORG00000026371)	Mtdh (ENSDORG00000004411)	Tspyl5 (ENSDORG00000015407)	Cpq (ENSDORG00000015406)
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00940000159740	ENSGT00520000055634.a	ENSGT00390000004040	ENSGT00940000157594	ENSGT00390000011748	ENSGT00390000007776	ENSGT01100000263484.B.b.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094.hb	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00940000159740	ENSGT00520000055634.a	ENSGT00390000004040	ENSGT00940000157594	ENSGT00390000011748	ENSGT00390000007776	ENSGT01100000263484.B.b.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094.hb	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Hystricomorpha_b	ANCESTRAL SPECIES	25	ENSGT00940000159740	ENSGT00520000055634.a	ENSGT00390000004040	ENSGT00940000157594	ENSGT00390000011748	ENSGT00390000007776	ENSGT01100000263484.B.b.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094.hb	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Long-tailed chinchilla	MODERN SPECIES	124	SYBU (ENSCLAG00000009904)	EBAG9 (ENSCLAG00000007984)	PKHD1L1 (ENSCLAG00000004469)	ENY2 (ENSCLAG00000006159)	NUDCD1 (ENSCLAG00000005542)	TRHR (ENSCLAG00000005381)	ZNF706 (ENSCLAG00000005214)	ENSCLAG00000005116	YWHAZ (ENSCLAG00000004303)	PABPC1 (ENSCLAG00000009676)	SNX31 (ENSCLAG00000011888)	ENSCLAG00000017008	RNF19A (ENSCLAG00000015646)	SPAG1 (ENSCLAG00000013379)	POLR2K (ENSCLAG00000010033)	FBXO43 (ENSCLAG00000007471) ##22	RGS22 (ENSCLAG00000004565)	COX6C (ENSCLAG00000004170)	VPS13B (ENSCLAG00000004590)	OSR2 (ENSCLAG00000012733)	STK3 (ENSCLAG00000012018)	KCNS2 (ENSCLAG00000018060)	NIPAL2 (ENSCLAG00000008008)	POP1 (ENSCLAG00000007208)	RIDA (ENSCLAG00000006938)	ERICH5 (ENSCLAG00000006781)	RPL30 (ENSCLAG00000006288)	MATN2 (ENSCLAG00000005911)	LAPTM4B (ENSCLAG00000005642)	MTDH (ENSCLAG00000007884)	ENSCLAG00000007799
Guinea pig	MODERN SPECIES		KCNV1 (ENSCPOG00000005491)	SYBU (ENSCPOG00000023014)	EBAG9 (ENSCPOG00000030274)	PKHD1L1 (ENSCPOG00000019466)	ENY2 (ENSCPOG00000010988)	NUDCD1 (ENSCPOG00000036228)	TRHR (ENSCPOG00000011339)	ZNF706 (ENSCPOG00000037379)	YWHAZ (ENSCPOG00000040522)	PABPC1 (ENSCPOG00000012917)	SNX31 (ENSCPOG00000012914)	ANKRD46 (ENSCPOG00000032374)	RNF19A (ENSCPOG00000007313)	SPAG1 (ENSCPOG00000002162)	POLR2K (ENSCPOG00000036717)	FBXO43 (ENSCPOG00000002160) ##22	RGS22 (ENSCPOG00000002153)	COX6C (ENSCPOG00000014456)	VPS13B (ENSCPOG00000014447)	ENSCPOG00000019380	OSR2 (ENSCPOG00000020572)	STK3 (ENSCPOG00000010689)	KCNS2 (ENSCPOG00000026156)	NIPAL2 (ENSCPOG00000032021)	POP1 (ENSCPOG00000002901)	RIDA (ENSCPOG00000036991)	RPL30 (ENSCPOG00000030315)	MATN2 (ENSCPOG00000003062)	LAPTM4B (ENSCPOG00000020368)	MTDH (ENSCPOG00000037219)	CPQ (ENSCPOG00000007260)
Naked mole-rat female	MODERN SPECIES	13	ENSHGLG00000034595	ENSHGLG00000013414	ENSHGLG00000012690	ENSHGLG00000016503	TRHR (ENSHGLG00000016486)	ENSHGLG00000047813	ENSHGLG00000033770	ENSHGLG00000009040	PABPC1 (ENSHGLG00000007713)	SNX31 (ENSHGLG00000005963)	ANKRD46 (ENSHGLG00000004526)	ENSHGLG00000004487	RNF19A (ENSHGLG00000004447)	SPAG1 (ENSHGLG00000004354)	ENSHGLG00000004285	FBXO43 (ENSHGLG00000017578) ##22	ENSHGLG00000018671	RGS22 (ENSHGLG00000018462)	COX6C (ENSHGLG00000017404)	VPS13B (ENSHGLG00000012549)	OSR2 (ENSHGLG00000011216)	STK3 (ENSHGLG00000008473)	KCNS2 (ENSHGLG00000039128)	NIPAL2 (ENSHGLG00000040382)	ENSHGLG00000047572	POP1 (ENSHGLG00000006029)	HRSP12 (ENSHGLG00000035354)	ERICH5 (ENSHGLG00000005192)	RPL30 (ENSHGLG00000034047)	ENSHGLG00000033730	ENSHGLG00000010022
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j.b	ENSGT00390000012138.a.b.s.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Marmotini	ANCESTRAL SPECIES	10	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.a.r	ENSGT00900000143156.a	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Arctic ground squirrel	MODERN SPECIES	1	ODF1 (ENSUPAG00010012459)	UBR5 (ENSUPAG00010012476)	RRM2B (ENSUPAG00010012580)	NCALD (ENSUPAG00010012610)	GRHL2 (ENSUPAG00010012657)	ENSUPAG00010012678	YWHAZ (ENSUPAG00010012698)	PABPC1 (ENSUPAG00010012731)	SNX31 (ENSUPAG00010012764)	ENSUPAG00010012795	ANKRD46 (ENSUPAG00010012805)	RNF19A (ENSUPAG00010012809)	ENSUPAG00010012820	ENSUPAG00010012851	ENSUPAG00010012856	FBXO43 (ENSUPAG00010012872) ##22	RGS22 (ENSUPAG00010012884)	ENSUPAG00010012936	VPS13B (ENSUPAG00010012963)	ENSUPAG00010013083	ENSUPAG00010013097	ENSUPAG00010013107	ENSUPAG00010013114	OSR2 (ENSUPAG00010013120)	STK3 (ENSUPAG00010013132)	KCNS2 (ENSUPAG00010013167)	NIPAL2 (ENSUPAG00010013172)	POP1 (ENSUPAG00010013195)	RIDA (ENSUPAG00010013221)	ERICH5 (ENSUPAG00010013227)	ENSUPAG00010013235
Squirrel	MODERN SPECIES	70	UBR5 (ENSSTOG00000005328)	RRM2B (ENSSTOG00000008543)	NCALD (ENSSTOG00000013760)	GRHL2 (ENSSTOG00000001498)	ENSSTOG00000030933	ENSSTOG00000031885	ZNF706 (ENSSTOG00000022580)	ENSSTOG00000023864	ENSSTOG00000034817	PABPC1 (ENSSTOG00000016395)	SNX31 (ENSSTOG00000016392)	ENSSTOG00000024280	RNF19A (ENSSTOG00000006177)	SPAG1 (ENSSTOG00000006135)	POLR2K (ENSSTOG00000006123)	FBXO43 (ENSSTOG00000027663) ##22	RGS22 (ENSSTOG00000015674)	COX6C (ENSSTOG00000015672)	VPS13B (ENSSTOG00000015651)	ENSSTOG00000027003	OSR2 (ENSSTOG00000021263)	ENSSTOG00000029048	STK3 (ENSSTOG00000000651)	KCNS2 (ENSSTOG00000024646)	NIPAL2 (ENSSTOG00000000646)	POP1 (ENSSTOG00000011455)	ENSSTOG00000011452	ERICH5 (ENSSTOG00000011450)	ENSSTOG00000030813	MATN2 (ENSSTOG00000011440)	LAPTM4B (ENSSTOG00000022846)
Alpin marmot	MODERN SPECIES	18	AZIN1 (ENSMMMG00000016403)	KLF10 (ENSMMMG00000016396)	ODF1 (ENSMMMG00000016389)	UBR5 (ENSMMMG00000016293)	RRM2B (ENSMMMG00000016263)	NCALD (ENSMMMG00000016254)	GRHL2 (ENSMMMG00000016231)	ENSMMMG00000016188	PABPC1 (ENSMMMG00000016183)	SNX31 (ENSMMMG00000016151)	ANKRD46 (ENSMMMG00000016148)	RNF19A (ENSMMMG00000016129)	ENSMMMG00000016121	ENSMMMG00000016116	ENSMMMG00000016111	FBXO43 (ENSMMMG00000016105) ##22	RGS22 (ENSMMMG00000016089)	COX6C (ENSMMMG00000016076)	VPS13B (ENSMMMG00000016018)	OSR2 (ENSMMMG00000015987)	STK3 (ENSMMMG00000015954)	KCNS2 (ENSMMMG00000015951)	NIPAL2 (ENSMMMG00000015942)	POP1 (ENSMMMG00000015905)	RIDA (ENSMMMG00000015899)	ENSMMMG00000015872	MATN2 (ENSMMMG00000015779)	LAPTM4B (ENSMMMG00000015757)	ENSMMMG00000015749	MTDH (ENSMMMG00000015702)
Eurasian red squirrel	MODERN SPECIES		ODF1 (ENSSVLG00005000313)	ENSSVLG00005000294	RRM2B (ENSSVLG00005000261)	NCALD (ENSSVLG00005000221)	GRHL2 (ENSSVLG00005000203)	ENSSVLG00005003378	ENSSVLG00005003357	ENSSVLG00005003330	PABPC1 (ENSSVLG00005003305)	SNX31 (ENSSVLG00005003271)	ENSSVLG00005003243	RNF19A (ENSSVLG00005003226)	ENSSVLG00005003189	ENSSVLG00005003160	ENSSVLG00005003136	FBXO43 (ENSSVLG00005003116) ##22	RGS22 (ENSSVLG00005002884)	ENSSVLG00005002835	ENSSVLG00005002823	ENSSVLG00005002811	ENSSVLG00005002798	ENSSVLG00005002791	VPS13B (ENSSVLG00005002505)	OSR2 (ENSSVLG00005002406)	STK3 (ENSSVLG00005002365)	KCNS2 (ENSSVLG00005002345)	NIPAL2 (ENSSVLG00005002294)	POP1 (ENSSVLG00005002246)	ENSSVLG00005002234	ERICH5 (ENSSVLG00005002215)	ENSSVLG00005002202
Lagomorpha	ANCESTRAL SPECIES	20	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.s.b	ENSGT00390000012138.a.b.s.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a.d
Rabbit	MODERN SPECIES	14	KLF10 (ENSOCUG00000016141)	ODF1 (ENSOCUG00000017222)	ENSOCUG00000030455	UBR5 (ENSOCUG00000008549)	RRM2B (ENSOCUG00000008545)	NCALD (ENSOCUG00000009431)	GRHL2 (ENSOCUG00000004750)	ZNF706 (ENSOCUG00000008661)	YWHAZ (ENSOCUG00000000734)	ENSOCUG00000004354	SNX31 (ENSOCUG00000009781)	ANKRD46 (ENSOCUG00000009778)	RNF19A (ENSOCUG00000001892)	SPAG1 (ENSOCUG00000001879)	ENSOCUG00000029376	FBXO43 (ENSOCUG00000008776) ##22	RGS22 (ENSOCUG00000031074)	ENSOCUG00000039216	VPS13B (ENSOCUG00000008725)	OSR2 (ENSOCUG00000022383)	ENSOCUG00000011503	STK3 (ENSOCUG00000004545)	KCNS2 (ENSOCUG00000004540)	ENSOCUG00000017407	POP1 (ENSOCUG00000017400)	ENSOCUG00000035058	ENSOCUG00000017391	RPL30 (ENSOCUG00000017386)	MATN2 (ENSOCUG00000017377)	LAPTM4B (ENSOCUG00000013689)	MTDH (ENSOCUG00000011400)
Pika	MODERN SPECIES	2433										PABPC1 (ENSOPRG00000009667)	SNX31 (ENSOPRG00000009639)	ANKRD46 (ENSOPRG00000009629)	RNF19A (ENSOPRG00000009614)	SPAG1 (ENSOPRG00000009566)	ENSOPRG00000009562	FBXO43 (ENSOPRG00000009549) ##22
Tree shrew	MODERN SPECIES	1449												ENSTBEG00000011202	ENSTBEG00000011079	SPAG1 (ENSTBEG00000010731)	ENSTBEG00000010260	FBXO43 (ENSTBEG00000009744) ##22	RGS22 (ENSTBEG00000017185)
Laurasiatheria	ANCESTRAL SPECIES	18	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00900000143156	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00960000187108	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a
Eulipotyphla	ANCESTRAL SPECIES	2391															ENSGT00390000008918.b	ENSGT00530000063692.a ##22
Hedgehog	MODERN SPECIES	5061																FBXO43 (ENSEEUG00000008183) ##22
Common shrew	MODERN SPECIES	3906															POLR2K (ENSSARG00000001557)	ENSSARG00000001544 ##22
Laurasiatheria_a	ANCESTRAL SPECIES	20	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Suina	ANCESTRAL SPECIES	26	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.a.a	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Chacoan peccary	MODERN SPECIES	114	KLF10 (ENSCWAG00000016499)	ODF1 (ENSCWAG00000016464)	UBR5 (ENSCWAG00000016332)	RRM2B (ENSCWAG00000016018)	NCALD (ENSCWAG00000015972)	GRHL2 (ENSCWAG00000015813)	ZNF706 (ENSCWAG00000015780)	YWHAZ (ENSCWAG00000015721)	ENSCWAG00000015686	PABPC1 (ENSCWAG00000015652)	SNX31 (ENSCWAG00000015544)	ANKRD46 (ENSCWAG00000015507)	RNF19A (ENSCWAG00000015454)	SPAG1 (ENSCWAG00000015290)	ENSCWAG00000015246	FBXO43 (ENSCWAG00000015183) ##22	RGS22 (ENSCWAG00000014458)	ENSCWAG00000014359
Pig	MODERN SPECIES	12	ODF1 (ENSSSCG00000006056)	UBR5 (ENSSSCG00000022479)	RRM2B (ENSSSCG00000036139)	NCALD (ENSSSCG00000006059)	ENSSSCG00000050468	GRHL2 (ENSSSCG00000006060)	ZNF706 (ENSSSCG00000056174)	ENSSSCG00000006062	ENSSSCG00000060547	PABPC1 (ENSSSCG00000006063)	SNX31 (ENSSSCG00000006064)	ANKRD46 (ENSSSCG00000006065)	RNF19A (ENSSSCG00000006066)	SPAG1 (ENSSSCG00000027587)	POLR2K (ENSSSCG00000021180)	FBXO43 (ENSSSCG00000053859) ##22	RGS22 (ENSSSCG00000006069)	ENSSSCG00000031418	COX6C (ENSSSCG00000060790)	VPS13B (ENSSSCG00000006071)	ENSSSCG00000042557	OSR2 (ENSSSCG00000006073)	STK3 (ENSSSCG00000006074)	ENSSSCG00000041004	KCNS2 (ENSSSCG00000031917)	NIPAL2 (ENSSSCG00000031267)	POP1 (ENSSSCG00000006078)	RIDA (ENSSSCG00000006079)	ENSSSCG00000050707	ENSSSCG00000006081	ENSSSCG00000045692
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00900000143156	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Cetacea	ANCESTRAL SPECIES	17	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT01060000248806.b	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00950000183123.g.b.b.g.a	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000155144.j
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00980000199387.d.b	ENSGT00950000183212.A	ENSGT01060000248806.b	ENSGT00940000157094	ENSGT00940000155384.a.h	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00950000183123.g.b.b.g.a	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.j	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000155144.j
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00980000199387.d.b	ENSGT00390000018433.s.a.b.b	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT01060000248806.b	ENSGT00940000157094	ENSGT00940000155384.a.h	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00950000183123.g.b.b.g.a	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.j.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00980000199387.d.b	ENSGT00950000183212.A	ENSGT01060000248806.b	ENSGT00940000157094	ENSGT00940000155384.a.h	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00950000183123.g.b.b.g.a	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.j.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00980000199387.d.b	ENSGT00950000183212.A	ENSGT01060000248806.b	ENSGT00940000157094	ENSGT00940000155384.a.h	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00950000183123.g.b.b.g.a	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.j.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Beluga whale	MODERN SPECIES	9	NCALD (ENSDLEG00000002477)	ENSDLEG00000002486	ENSDLEG00000002509	ZNF706 (ENSDLEG00000002515)	YWHAZ (ENSDLEG00000002530)	ENSDLEG00000002547	PABPC1 (ENSDLEG00000002559)	ENSDLEG00000002593	SNX31 (ENSDLEG00000002608)	ENSDLEG00000002666	ANKRD46 (ENSDLEG00000002673)	ENSDLEG00000002678	RNF19A (ENSDLEG00000002682)	ENSDLEG00000002689	ENSDLEG00000002697	FBXO43 (ENSDLEG00000002702) ##22	RGS22 (ENSDLEG00000002729)	ENSDLEG00000002867	COX6C (ENSDLEG00000002879)	VPS13B (ENSDLEG00000002897)	OSR2 (ENSDLEG00000002946)	STK3 (ENSDLEG00000002957)	KCNS2 (ENSDLEG00000002962)	NIPAL2 (ENSDLEG00000002965)	POP1 (ENSDLEG00000002977)	RIDA (ENSDLEG00000002988)	ERICH5 (ENSDLEG00000003002)	RPL30 (ENSDLEG00000003007)	MATN2 (ENSDLEG00000003028)	ENSDLEG00000003063	ENSDLEG00000003070
Narwhal	MODERN SPECIES	300	UBR5 (ENSMMNG00015011329)	RRM2B (ENSMMNG00015011450)	NCALD (ENSMMNG00015011492)	GRHL2 (ENSMMNG00015011509)	ENSMMNG00015011534	YWHAZ (ENSMMNG00015011551)	PABPC1 (ENSMMNG00015011589)	ENSMMNG00015011651	SNX31 (ENSMMNG00015011665)	ENSMMNG00015011690	ANKRD46 (ENSMMNG00015011697)	ENSMMNG00015011711	RNF19A (ENSMMNG00015011729)	SPAG1 (ENSMMNG00015011766)	ENSMMNG00015011790	FBXO43 (ENSMMNG00015011798) ##22	RGS22 (ENSMMNG00015011847)	COX6C (ENSMMNG00015012045)	VPS13B (ENSMMNG00015012082)	ENSMMNG00015012128	OSR2 (ENSMMNG00015012148)	STK3 (ENSMMNG00015012175)	KCNS2 (ENSMMNG00015012202)	NIPAL2 (ENSMMNG00015012229)	POP1 (ENSMMNG00015012259)	ENSMMNG00015012305	ERICH5 (ENSMMNG00015012317)	ENSMMNG00015012331	MATN2 (ENSMMNG00015012438)	LAPTM4B (ENSMMNG00015012560)	MTDH (ENSMMNG00015012582)
Vaquita	MODERN SPECIES	8	KLF10 (ENSPSNG00000019897)	ODF1 (ENSPSNG00000019864)	UBR5 (ENSPSNG00000019200)	RRM2B (ENSPSNG00000019033)	NCALD (ENSPSNG00000018982)	GRHL2 (ENSPSNG00000018751)	ENSPSNG00000018705	ENSPSNG00000018640	PABPC1 (ENSPSNG00000018503)	ENSPSNG00000018450	ENSPSNG00000018412	SNX31 (ENSPSNG00000018275)	ANKRD46 (ENSPSNG00000018238)	RNF19A (ENSPSNG00000018200)	SPAG1 (ENSPSNG00000018122)	FBXO43 (ENSPSNG00000018045) ##22	RGS22 (ENSPSNG00000017084)	COX6C (ENSPSNG00000016995)	VPS13B (ENSPSNG00000016812)	OSR2 (ENSPSNG00000016679)	STK3 (ENSPSNG00000016511)	KCNS2 (ENSPSNG00000016474)	NIPAL2 (ENSPSNG00000016364)	POP1 (ENSPSNG00000016227)	ENSPSNG00000016171	ERICH5 (ENSPSNG00000016114)	ENSPSNG00000016013	MATN2 (ENSPSNG00000015000)	ENSPSNG00000014848	MTDH (ENSPSNG00000014659)	TSPYL5 (ENSPSNG00000014593)
Dolphin	MODERN SPECIES	1565													RNF19A (ENSTTRG00000007491)	SPAG1 (ENSTTRG00000007490)	POLR2K (ENSTTRG00000007489)	FBXO43 (ENSTTRG00000007487) ##22	RGS22 (ENSTTRG00000007486)	ENSTTRG00000007485	VPS13B (ENSTTRG00000007479)	OSR2 (ENSTTRG00000007477)
Sperm whale	MODERN SPECIES	6	UBR5 (ENSPCTG00005004433)	RRM2B (ENSPCTG00005004528)	NCALD (ENSPCTG00005004769)	GRHL2 (ENSPCTG00005004802)	ZNF706 (ENSPCTG00005004868)	YWHAZ (ENSPCTG00005004878)	PABPC1 (ENSPCTG00005004891)	ENSPCTG00005004943	SNX31 (ENSPCTG00005004964)	ENSPCTG00005005029	ENSPCTG00005005042	ENSPCTG00005005052	RNF19A (ENSPCTG00005005074)	SPAG1 (ENSPCTG00005005112)	POLR2K (ENSPCTG00005005138)	FBXO43 (ENSPCTG00005005173) ##22	RGS22 (ENSPCTG00005005192)	ENSPCTG00005005212	ENSPCTG00005005225	VPS13B (ENSPCTG00005005254)	OSR2 (ENSPCTG00005005444)	STK3 (ENSPCTG00005005481)	KCNS2 (ENSPCTG00005005533)	NIPAL2 (ENSPCTG00005005566)	POP1 (ENSPCTG00005005626)	RIDA (ENSPCTG00005005680)	ERICH5 (ENSPCTG00005005712)	RPL30 (ENSPCTG00005005738)	MATN2 (ENSPCTG00005005898)	LAPTM4B (ENSPCTG00005006269)	ENSPCTG00005006300
Blue whale	MODERN SPECIES	8	KLF10 (ENSBMSG00010017375)	ODF1 (ENSBMSG00010017393)	ENSBMSG00010017415	RRM2B (ENSBMSG00010017492)	NCALD (ENSBMSG00010017668)	GRHL2 (ENSBMSG00010017745)	ENSBMSG00010017870	ENSBMSG00010017889	YWHAZ (ENSBMSG00010017904)	PABPC1 (ENSBMSG00010017940)	SNX31 (ENSBMSG00010018001)	ENSBMSG00010018067	ANKRD46 (ENSBMSG00010018073)	RNF19A (ENSBMSG00010018105)	SPAG1 (ENSBMSG00010018129)	FBXO43 (ENSBMSG00010018245) ##22	RGS22 (ENSBMSG00010018309)	COX6C (ENSBMSG00010018531)	VPS13B (ENSBMSG00010018620)	ENSBMSG00010019262	OSR2 (ENSBMSG00010013955)	STK3 (ENSBMSG00010014023)	ENSBMSG00010014104	KCNS2 (ENSBMSG00010014119)	NIPAL2 (ENSBMSG00010014151)	POP1 (ENSBMSG00010014249)	ENSBMSG00010014294	ERICH5 (ENSBMSG00010014315)	ENSBMSG00010014363	MATN2 (ENSBMSG00010014488)	LAPTM4B (ENSBMSG00010014706)
Pecora	ANCESTRAL SPECIES	20	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01010000222946	ENSGT01090000260040.a.a.a	ENSGT00900000143156	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Percora_a	ANCESTRAL SPECIES	23	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01010000222946	ENSGT01090000260040.a.a.a	ENSGT00900000143156	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.a.j	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a
Bovidae	ANCESTRAL SPECIES	22	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01010000222946.d.b	ENSGT01090000260040.a.a.a	ENSGT00900000143156	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a	ENSGT00940000154181.a	ENSGT00940000162862
Caprinae	ANCESTRAL SPECIES	18	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01010000222946.d.b	ENSGT01090000260040.a.a.a	ENSGT00900000143156	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.f	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.f	ENSGT00940000154181.a	ENSGT00940000153288.a.a.d.h.b
Goat	MODERN SPECIES	5	ODF1 (ENSCHIG00000024723)	UBR5 (ENSCHIG00000020937)	RRM2B (ENSCHIG00000022467)	ENSCHIG00000006508	NCALD (ENSCHIG00000008263)	GRHL2 (ENSCHIG00000017724)	ENSCHIG00000007167	ENSCHIG00000020223	ENSCHIG00000017005	PABPC1 (ENSCHIG00000023714)	SNX31 (ENSCHIG00000014508)	ANKRD46 (ENSCHIG00000020276)	RNF19A (ENSCHIG00000014198)	SPAG1 (ENSCHIG00000018545)	ENSCHIG00000012813	FBXO43 (ENSCHIG00000008303) ##22	RGS22 (ENSCHIG00000013238)	ENSCHIG00000016789	ENSCHIG00000022299	ENSCHIG00000006748	OSR2 (ENSCHIG00000019458)	STK3 (ENSCHIG00000010771)	KCNS2 (ENSCHIG00000004644)	ENSCHIG00000004977	NIPAL2 (ENSCHIG00000015486)	POP1 (ENSCHIG00000017066)	RIDA (ENSCHIG00000012463)	ENSCHIG00000021324	RPL30 (ENSCHIG00000016945)	MATN2 (ENSCHIG00000022338)	ENSCHIG00000007841
Rambouillet Sheep	MODERN SPECIES	25	ODF1 (ENSOARG00020020904)	UBR5 (ENSOARG00020020960)	RRM2B (ENSOARG00020021787)	ENSOARG00020021952	NCALD (ENSOARG00020021967)	GRHL2 (ENSOARG00020021997)	ZNF706 (ENSOARG00020022100)	YWHAZ (ENSOARG00020022136)	ENSOARG00020022202	PABPC1 (ENSOARG00020022236)	SNX31 (ENSOARG00020022297)	ANKRD46 (ENSOARG00020022374)	RNF19A (ENSOARG00020022413)	SPAG1 (ENSOARG00020022463)	POLR2K (ENSOARG00020022599)	FBXO43 (ENSOARG00020022615) ##22	RGS22 (ENSOARG00020022670)	ENSOARG00020023270	VPS13B (ENSOARG00020023325)	OSR2 (ENSOARG00020023989)	STK3 (ENSOARG00020024012)	KCNS2 (ENSOARG00020024063)	NIPAL2 (ENSOARG00020024078)	POP1 (ENSOARG00020024170)	RIDA (ENSOARG00020024188)	ENSOARG00020024208	ENSOARG00020024228	MATN2 (ENSOARG00020024259)	ENSOARG00020024346	MTDH (ENSOARG00020024390)	ENSOARG00020003057
Bovinae	ANCESTRAL SPECIES	18	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.c.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.a	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a
Bos	ANCESTRAL SPECIES	21	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.c.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00940000162862.c
Bos_a	ANCESTRAL SPECIES	42	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.c.a	ENSGT00390000010783	ENSGT00960000187108	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.a.b
Wild yak	MODERN SPECIES	41						NCALD (ENSBMUG00000025597)	GRHL2 (ENSBMUG00000025584)	ZNF706 (ENSBMUG00000025573)	YWHAZ (ENSBMUG00000025566)	ENSBMUG00000025558	SNX31 (ENSBMUG00000025543)	ANKRD46 (ENSBMUG00000025537)	RNF19A (ENSBMUG00000025530)	SPAG1 (ENSBMUG00000025521)	POLR2K (ENSBMUG00000025513)	FBXO43 (ENSBMUG00000025512) ##22
Domestic yak	MODERN SPECIES	9	ENSBGRG00000008125	ODF1 (ENSBGRG00000008140)	UBR5 (ENSBGRG00000008227)	RRM2B (ENSBGRG00000009124)	NCALD (ENSBGRG00000009429)	GRHL2 (ENSBGRG00000009497)	ZNF706 (ENSBGRG00000009675)	YWHAZ (ENSBGRG00000009704)	PABPC1 (ENSBGRG00000009759)	SNX31 (ENSBGRG00000009869)	ENSBGRG00000009947	ANKRD46 (ENSBGRG00000009988)	RNF19A (ENSBGRG00000010272)	SPAG1 (ENSBGRG00000010452)	POLR2K (ENSBGRG00000010705)	FBXO43 (ENSBGRG00000010794) ##22	RGS22 (ENSBGRG00000010982)	ENSBGRG00000012009	ENSBGRG00000003826	ENSBGRG00000003863	ENSBGRG00000003904	OSR2 (ENSBGRG00000004042)	STK3 (ENSBGRG00000004102)	KCNS2 (ENSBGRG00000004341)	NIPAL2 (ENSBGRG00000004376)	ENSBGRG00000004577	ENSBGRG00000004591	POP1 (ENSBGRG00000004614)	ENSBGRG00000004680	ERICH5 (ENSBGRG00000004723)	RPL30 (ENSBGRG00000004783)
Bos_b	ANCESTRAL SPECIES	25	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT01100000263481.n.a.b.a.b.a.b.a.a.a.b.b	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.x.b.a.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.c.a	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00950000182901.a.a.b.b.a.b.a.a.b.b.b
Cow	MODERN SPECIES	5	ODF1 (ENSBTAG00000003445)	UBR5 (ENSBTAG00000021209)	RRM2B (ENSBTAG00000021208)	NCALD (ENSBTAG00000026963)	GRHL2 (ENSBTAG00000004518)	ZNF706 (ENSBTAG00000008054)	YWHAZ (ENSBTAG00000000236)	PABPC1 (ENSBTAG00000046358)	SNX31 (ENSBTAG00000011271)	ANKRD46 (ENSBTAG00000001254)	ENSBTAG00000054554	RNF19A (ENSBTAG00000017833)	ENSBTAG00000050156	SPAG1 (ENSBTAG00000032544)	POLR2K (ENSBTAG00000022539)	FBXO43 (ENSBTAG00000019795) ##22	RGS22 (ENSBTAG00000019793)	COX6C (ENSBTAG00000014130)	VPS13B (ENSBTAG00000012357)	OSR2 (ENSBTAG00000013213)	STK3 (ENSBTAG00000026234)	KCNS2 (ENSBTAG00000007768)	NIPAL2 (ENSBTAG00000018206)	POP1 (ENSBTAG00000012596)	RIDA (ENSBTAG00000012595)	ERICH5 (ENSBTAG00000018493)	RPL30 (ENSBTAG00000016278)	MATN2 (ENSBTAG00000017165)	LAPTM4B (ENSBTAG00000016959)	MTDH (ENSBTAG00000003098)	ENSBTAG00000032432
Hybrid Bos Indicus	MODERN SPECIES	5	RRM2B (ENSBIXG00005012510)	ENSBIXG00005012396	NCALD (ENSBIXG00005012381)	ENSBIXG00005001314	GRHL2 (ENSBIXG00005012342)	ENSBIXG00005012298	ENSBIXG00005001276	PABPC1 (ENSBIXG00005005823)	SNX31 (ENSBIXG00005012055)	ENSBIXG00005012042	ANKRD46 (ENSBIXG00005001241)	ENSBIXG00005011975	RNF19A (ENSBIXG00005001214)	SPAG1 (ENSBIXG00005011906)	POLR2K (ENSBIXG00005011816)	FBXO43 (ENSBIXG00005011794) ##22	ENSBIXG00005011746	ENSBIXG00005007522	VPS13B (ENSBIXG00005011378)	OSR2 (ENSBIXG00005001075)	STK3 (ENSBIXG00005011245)	ENSBIXG00005001042	KCNS2 (ENSBIXG00005011199)	NIPAL2 (ENSBIXG00005011182)	POP1 (ENSBIXG00005011155)	ENSBIXG00005011123	ERICH5 (ENSBIXG00005011096)	RPL30 (ENSBIXG00005011081)	MATN2 (ENSBIXG00005011025)	ENSBIXG00005010944	ENSBIXG00005000590
American bison	MODERN SPECIES	3348	KLF10 (ENSBBBG00000013572)	ODF1 (ENSBBBG00000009052)	ENSBBBG00000013565	RRM2B (ENSBBBG00000002801)	NCALD (ENSBBBG00000002770)	GRHL2 (ENSBBBG00000013495)	ZNF706 (ENSBBBG00000013456)	YWHAZ (ENSBBBG00000013437)	ENSBBBG00000001561	SNX31 (ENSBBBG00000013373)	ANKRD46 (ENSBBBG00000013348)	RNF19A (ENSBBBG00000002715)	ENSBBBG00000013317	ENSBBBG00000013304	POLR2K (ENSBBBG00000013298)	FBXO43 (ENSBBBG00000008147) ##22	RGS22 (ENSBBBG00000001626)	COX6C (ENSBBBG00000013243)	ENSBBBG00000002668	ENSBBBG00000013208	OSR2 (ENSBBBG00000013191)	STK3 (ENSBBBG00000008905)	KCNS2 (ENSBBBG00000013171)	ENSBBBG00000013166	POP1 (ENSBBBG00000002653)	ENSBBBG00000006940	ENSBBBG00000013121	RPL30 (ENSBBBG00000013116)	MATN2 (ENSBBBG00000013106)	ENSBBBG00000008284	MTDH (ENSBBBG00000012966)
Siberian musk deer	MODERN SPECIES	174	ODF1 (ENSMMSG00000002925)	UBR5 (ENSMMSG00000002891)	RRM2B (ENSMMSG00000002803)	ENSMMSG00000002782	NCALD (ENSMMSG00000002766)	GRHL2 (ENSMMSG00000002727)	ENSMMSG00000002708	ENSMMSG00000002702	YWHAZ (ENSMMSG00000002669)	PABPC1 (ENSMMSG00000002644)	SNX31 (ENSMMSG00000002585)	ANKRD46 (ENSMMSG00000002557)	ENSMMSG00000002542	SPAG1 (ENSMMSG00000002500)	POLR2K (ENSMMSG00000002483)	FBXO43 (ENSMMSG00000002471) ##22	RGS22 (ENSMMSG00000002098)	ENSMMSG00000002049	ENSMMSG00000002027	VPS13B (ENSMMSG00000001947)	OSR2 (ENSMMSG00000001927)	STK3 (ENSMMSG00000001896)	KCNS2 (ENSMMSG00000001883)	NIPAL2 (ENSMMSG00000001867)	POP1 (ENSMMSG00000001856)	RIDA (ENSMMSG00000001842)	ERICH5 (ENSMMSG00000001834)	ENSMMSG00000001823	ENSMMSG00000001801	MATN2 (ENSMMSG00000001772)	LAPTM4B (ENSMMSG00000001732)
Yarkand deer	MODERN SPECIES	13	KLF10 (ENSCHYG00000017815)	ODF1 (ENSCHYG00000017848)	UBR5 (ENSCHYG00000017895)	RRM2B (ENSCHYG00000018392)	NCALD (ENSCHYG00000018626)	GRHL2 (ENSCHYG00000018706)	ENSCHYG00000018871	ENSCHYG00000018994	ENSCHYG00000019129	PABPC1 (ENSCHYG00000019189)	SNX31 (ENSCHYG00000019663)	ANKRD46 (ENSCHYG00000019909)	RNF19A (ENSCHYG00000020042)	SPAG1 (ENSCHYG00000020151)	POLR2K (ENSCHYG00000020234)	FBXO43 (ENSCHYG00000020294) ##22	RGS22 (ENSCHYG00000020409)	ENSCHYG00000021549	ENSCHYG00000021569	VPS13B (ENSCHYG00000021656)	ENSCHYG00000021931	OSR2 (ENSCHYG00000021949)	ENSCHYG00000022054	STK3 (ENSCHYG00000022075)	KCNS2 (ENSCHYG00000022187)	NIPAL2 (ENSCHYG00000022205)	POP1 (ENSCHYG00000022354)	ENSCHYG00000005063	ERICH5 (ENSCHYG00000005099)	RPL30 (ENSCHYG00000005137)	MATN2 (ENSCHYG00000005216)
Camelidae	ANCESTRAL SPECIES	19	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b.sb	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00960000187108	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Arabian camel	MODERN SPECIES	17	AZIN1 (ENSCDRG00005016170)	KLF10 (ENSCDRG00005016136)	ODF1 (ENSCDRG00005016109)	UBR5 (ENSCDRG00005015977)	RRM2B (ENSCDRG00005015807)	NCALD (ENSCDRG00005015766)	GRHL2 (ENSCDRG00005015641)	ENSCDRG00005015606	YWHAZ (ENSCDRG00005015550)	PABPC1 (ENSCDRG00005014736)	SNX31 (ENSCDRG00005014587)	ANKRD46 (ENSCDRG00005014490)	RNF19A (ENSCDRG00005014425)	SPAG1 (ENSCDRG00005014075)	POLR2K (ENSCDRG00005013986)	FBXO43 (ENSCDRG00005013952) ##22	RGS22 (ENSCDRG00005013115)	COX6C (ENSCDRG00005013053)	VPS13B (ENSCDRG00005010763)	OSR2 (ENSCDRG00005010609)	STK3 (ENSCDRG00005010463)	KCNS2 (ENSCDRG00005010446)	NIPAL2 (ENSCDRG00005010293)	POP1 (ENSCDRG00005009525)	ENSCDRG00005009475	RIDA (ENSCDRG00005009431)	ENSCDRG00005009388	RPL30 (ENSCDRG00005009291)	MATN2 (ENSCDRG00005008941)	MTDH (ENSCDRG00005021271)	TSPYL5 (ENSCDRG00005021266)
Laurasiatheria_b	ANCESTRAL SPECIES	20	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.a	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Carnivora	ANCESTRAL SPECIES	22	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Caniformia	ANCESTRAL SPECIES	23	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.l	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Caniformia_b	ANCESTRAL SPECIES	22	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Ursidae	ANCESTRAL SPECIES	26	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.e	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.l	ENSGT00940000154612.m.b.c	ENSGT00950000186261	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.l	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008.l
Ursus	ANCESTRAL SPECIES	46	ENSGT00940000156357.e	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.e	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00390000015797.c.b	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000154697.b	ENSGT00390000008918.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154612.m.b.c	ENSGT00950000186261	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.l	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008.l	ENSGT00940000153446.a.a.b
American black bear	MODERN SPECIES	2896																FBXO43 (ENSUAMG00000021242) ##22
Polar bear	MODERN SPECIES	157	UBR5 (ENSUMAG00000017960)	RRM2B (ENSUMAG00000017611)	NCALD (ENSUMAG00000017598)	ENSUMAG00000017593	ENSUMAG00000017592	ENSUMAG00000017587	ZNF706 (ENSUMAG00000017579)	ENSUMAG00000017568	PABPC1 (ENSUMAG00000017554)	SNX31 (ENSUMAG00000017541)	ANKRD46 (ENSUMAG00000017536)	ENSUMAG00000017530	RNF19A (ENSUMAG00000017523)	ENSUMAG00000017512	POLR2K (ENSUMAG00000017508)	FBXO43 (ENSUMAG00000017505) ##22	ENSUMAG00000017503	RGS22 (ENSUMAG00000017490)	COX6C (ENSUMAG00000017482)	ENSUMAG00000017478	ENSUMAG00000017470	VPS13B (ENSUMAG00000017073)	OSR2 (ENSUMAG00000016994)	STK3 (ENSUMAG00000016985)	KCNS2 (ENSUMAG00000016978)	NIPAL2 (ENSUMAG00000016967)	POP1 (ENSUMAG00000016952)	RIDA (ENSUMAG00000016949)	ERICH5 (ENSUMAG00000016948)	ENSUMAG00000016917	MATN2 (ENSUMAG00000016897)
Giant Panda	MODERN SPECIES	19	KLF10 (ENSAMEG00000014775)	ODF1 (ENSAMEG00000014784)	UBR5 (ENSAMEG00000014808)	RRM2B (ENSAMEG00000014883)	NCALD (ENSAMEG00000025395)	GRHL2 (ENSAMEG00000000278)	ZNF706 (ENSAMEG00000000327)	YWHAZ (ENSAMEG00000000328)	PABPC1 (ENSAMEG00000000348)	SNX31 (ENSAMEG00000000387)	ANKRD46 (ENSAMEG00000023515)	ENSAMEG00000025599	RNF19A (ENSAMEG00000000411)	ENSAMEG00000000429	POLR2K (ENSAMEG00000027296)	FBXO43 (ENSAMEG00000000454) ##22	RGS22 (ENSAMEG00000000468)	ENSAMEG00000000477	ENSAMEG00000028591	ENSAMEG00000023839	VPS13B (ENSAMEG00000000478)	OSR2 (ENSAMEG00000000519)	STK3 (ENSAMEG00000000520)	KCNS2 (ENSAMEG00000019744)	NIPAL2 (ENSAMEG00000000545)	POP1 (ENSAMEG00000000556)	RIDA (ENSAMEG00000000575)	ERICH5 (ENSAMEG00000000603)	RPL30 (ENSAMEG00000000605)	MATN2 (ENSAMEG00000000609)	LAPTM4B (ENSAMEG00000000664)
Mustelinae	ANCESTRAL SPECIES	70	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00960000187108	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Ferret	MODERN SPECIES	302	AZIN1 (ENSMPUG00000015128)	KLF10 (ENSMPUG00000015132)	ODF1 (ENSMPUG00000015134)	UBR5 (ENSMPUG00000015136)	RRM2B (ENSMPUG00000015147)	NCALD (ENSMPUG00000015152)	GRHL2 (ENSMPUG00000015153)	ENSMPUG00000019752	YWHAZ (ENSMPUG00000015158)	ENSMPUG00000015161	PABPC1 (ENSMPUG00000015163)	SNX31 (ENSMPUG00000015195)	ANKRD46 (ENSMPUG00000015198)	RNF19A (ENSMPUG00000015199)	SPAG1 (ENSMPUG00000015217)	FBXO43 (ENSMPUG00000015226) ##22	RGS22 (ENSMPUG00000015232)	VPS13B (ENSMPUG00000015235)	OSR2 (ENSMPUG00000015246)	STK3 (ENSMPUG00000015247)	KCNS2 (ENSMPUG00000019753)	NIPAL2 (ENSMPUG00000015248)	POP1 (ENSMPUG00000015250)	RIDA (ENSMPUG00000015253)	ERICH5 (ENSMPUG00000015254)	MATN2 (ENSMPUG00000015257)
American mink	MODERN SPECIES	10	ODF1 (ENSNVIG00000001125)	UBR5 (ENSNVIG00000000967)	ENSNVIG00000000956	NCALD (ENSNVIG00000000941)	GRHL2 (ENSNVIG00000000748)	ENSNVIG00000000737	ZNF706 (ENSNVIG00000000720)	ENSNVIG00000000688	PABPC1 (ENSNVIG00000000651)	SNX31 (ENSNVIG00000000636)	ANR46 (ENSNVIG00000000557)	RN19A (ENSNVIG00000000513)	SPAG1 (ENSNVIG00000000482)	POLR2K (ENSNVIG00000000467)	ENSNVIG00000000441	FBXO43 (ENSNVIG00000000429) ##22	RGS22 (ENSNVIG00000000412)	ENSNVIG00000000371	ENSNVIG00000000364	VPS13B (ENSNVIG00000000017)	OSR2 (ENSNVIG00000000004)	ENSNVIG00000024359	STK3 (ENSNVIG00000024356)	KCNS2 (ENSNVIG00000024354)	NIPAL2 (ENSNVIG00000024352)	POP1 (ENSNVIG00000024345)	RIDA (ENSNVIG00000024343)	ENSNVIG00000024341	ENSNVIG00000024337	MATN2 (ENSNVIG00000024321)	LAPTM4B (ENSNVIG00000024315)
Canidae	ANCESTRAL SPECIES	33	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT01090000260040.a.a.a.d	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.l	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788.f	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a.d	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00940000154697.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b.l.a.a	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00390000000970.a.b.b
Dingo	MODERN SPECIES	88	ENSCAFG00020002920	UBR5 (ENSCAFG00020000901)	ENSCAFG00020000716	RRM2B (ENSCAFG00020000711)	NCALD (ENSCAFG00020000694)	GRHL2 (ENSCAFG00020000549)	ENSCAFG00020000521	ENSCAFG00020000447	PABPC1 (ENSCAFG00020000440)	SNX31 (ENSCAFG00020000435)	ANKRD46 (ENSCAFG00020000425)	RNF19A (ENSCAFG00020000406)	ENSCAFG00020000369	ENSCAFG00020000328	POLR2K (ENSCAFG00020000296)	FBXO43 (ENSCAFG00020000269) ##22	ENSCAFG00020000266	RGS22 (ENSCAFG00020000232)	ENSCAFG00020000205	ENSCAFG00020026813	VPS13B (ENSCAFG00020026800)	OSR2 (ENSCAFG00020026780)	STK3 (ENSCAFG00020026777)	KCNS2 (ENSCAFG00020026776)	NIPAL2 (ENSCAFG00020026774)	POP1 (ENSCAFG00020026765)	RIDA (ENSCAFG00020026760)	ERICH5 (ENSCAFG00020026757)	ENSCAFG00020026754	MATN2 (ENSCAFG00020026751)	LAPTM4B (ENSCAFG00020026749)
Dog	MODERN SPECIES	4	ODF1 (ENSCAFG00845007988)	ENSCAFG00845007963	ENSCAFG00845007937	UBR5 (ENSCAFG00845007659)	RRM2B (ENSCAFG00845007500)	NCALD (ENSCAFG00845007325)	GRHL2 (ENSCAFG00845007182)	ZNF706 (ENSCAFG00845029017)	ENSCAFG00845028981	ENSCAFG00845028920	PABPC1 (ENSCAFG00845028663)	ANKRD46 (ENSCAFG00845028398)	RNF19A (ENSCAFG00845028274)	SPAG1 (ENSCAFG00845028134)	POLR2K (ENSCAFG00845028044)	FBXO43 (ENSCAFG00845028017) ##22	RGS22 (ENSCAFG00845026776)	ENSCAFG00845026489	VPS13B (ENSCAFG00845025516)	OSR2 (ENSCAFG00845025411)	ENSCAFG00845025372	STK3 (ENSCAFG00845025019)	KCNS2 (ENSCAFG00845024934)	NIPAL2 (ENSCAFG00845024702)	POP1 (ENSCAFG00845024573)	RIDA (ENSCAFG00845024508)	ENSCAFG00845024433	RPL30 (ENSCAFG00845024366)	ENSCAFG00845023761	LAPTM4B (ENSCAFG00845023537)	ENSCAFG00845023447
Red fox	MODERN SPECIES	17	RRM2B (ENSVVUG00000013296)	ENSVVUG00000013282	NCALD (ENSVVUG00000013269)	GRHL2 (ENSVVUG00000013233)	ZNF706 (ENSVVUG00000013199)	YWHAZ (ENSVVUG00000013173)	PABPC1 (ENSVVUG00000013156)	ENSVVUG00000013146	SNX31 (ENSVVUG00000013135)	ANKRD46 (ENSVVUG00000013128)	ENSVVUG00000013124	ENSVVUG00000013118	RNF19A (ENSVVUG00000013101)	SPAG1 (ENSVVUG00000013065)	ENSVVUG00000013043	FBXO43 (ENSVVUG00000013029) ##22	RGS22 (ENSVVUG00000012931)	ENSVVUG00000012916	VPS13B (ENSVVUG00000012344)	OSR2 (ENSVVUG00000012285)	ENSVVUG00000011079	KCNS2 (ENSVVUG00000011018)	NIPAL2 (ENSVVUG00000011005)	POP1 (ENSVVUG00000010994)	RIDA (ENSVVUG00000010986)	ENSVVUG00000010985	ENSVVUG00000010973	ENSVVUG00000010967	MATN2 (ENSVVUG00000010873)	LAPTM4B (ENSVVUG00000010834)
Felidae	ANCESTRAL SPECIES	22	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Panthera	ANCESTRAL SPECIES	16	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Panthera_a	ANCESTRAL SPECIES	16	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089.b	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00960000187108	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
lion	MODERN SPECIES	509	AZIN1 (ENSPLOG00000009568)	KLF10 (ENSPLOG00000009593)	ODF1 (ENSPLOG00000009637)	UBR5 (ENSPLOG00000009716)	RRM2B (ENSPLOG00000010208)	NCALD (ENSPLOG00000010356)	GRHL2 (ENSPLOG00000010390)	ENSPLOG00000010547	YWHAZ (ENSPLOG00000010570)	PABPC1 (ENSPLOG00000010602)	SNX31 (ENSPLOG00000010676)	ANKRD46 (ENSPLOG00000010763)	ENSPLOG00000010796	SPAG1 (ENSPLOG00000010871)	ENSPLOG00000010920	FBXO43 (ENSPLOG00000010951) ##22	RGS22 (ENSPLOG00000011076)	ENSPLOG00000011861	ENSPLOG00000011907	VPS13B (ENSPLOG00000012044)	OSR2 (ENSPLOG00000013256)	STK3 (ENSPLOG00000000034)	KCNS2 (ENSPLOG00000000040)	ENSPLOG00000000045	NIPAL2 (ENSPLOG00000000049)	POP1 (ENSPLOG00000000059)	RIDA (ENSPLOG00000000070)	ENSPLOG00000000076	ENSPLOG00000000083	MATN2 (ENSPLOG00000000101)	LAPTM4B (ENSPLOG00000000138)
leopard	MODERN SPECIES	52	UBR5 (ENSPPRG00000001290)	RRM2B (ENSPPRG00000010745)	NCALD (ENSPPRG00000008846)	GRHL2 (ENSPPRG00000008056)	ENSPPRG00000006486	ENSPPRG00000006131	ZNF706 (ENSPPRG00000005777)	YWHAZ (ENSPPRG00000005314)	ENSPPRG00000004097	PABPC1 (ENSPPRG00000003755)	SNX31 (ENSPPRG00000001393)	ANKRD46 (ENSPPRG00000000092)	RNF19A (ENSPPRG00000023075)	SPAG1 (ENSPPRG00000023559)	ENSPPRG00000024679	FBXO43 (ENSPPRG00000020083) ##22	RGS22 (ENSPPRG00000018641)	ENSPPRG00000009927	VPS13B (ENSPPRG00000009033)	OSR2 (ENSPPRG00000007822)	STK3 (ENSPPRG00000007099)	KCNS2 (ENSPPRG00000014270)	NIPAL2 (ENSPPRG00000005743)	POP1 (ENSPPRG00000005002)	RIDA (ENSPPRG00000004025)	ENSPPRG00000003614	ENSPPRG00000003481	MATN2 (ENSPPRG00000002691)	LAPTM4B (ENSPPRG00000000122)	MTDH (ENSPPRG00000023252)	TSPYL5 (ENSPPRG00000022349)
Tiger	MODERN SPECIES	17						NCALD (ENSPTIG00000001883)	GRHL2 (ENSPTIG00000021606)	ZNF706 (ENSPTIG00000021515)	ENSPTIG00000021410	PABPC1 (ENSPTIG00000021083)	SNX31 (ENSPTIG00000020831)	ANKRD46 (ENSPTIG00000020561)	RNF19A (ENSPTIG00000020344)	ENSPTIG00000020272	ENSPTIG00000020210	FBXO43 (ENSPTIG00000020120) ##22	RGS22 (ENSPTIG00000019122)	ENSPTIG00000018907	VPS13B (ENSPTIG00000017938)	OSR2 (ENSPTIG00000017237)	STK3 (ENSPTIG00000017116)	KCNS2 (ENSPTIG00000009540)	NIPAL2 (ENSPTIG00000016793)	POP1 (ENSPTIG00000016527)	RIDA (ENSPTIG00000016283)	ERICH5 (ENSPTIG00000016261)	RPL30 (ENSPTIG00000016098)	MATN2 (ENSPTIG00000015210)	LAPTM4B (ENSPTIG00000015012)	MTDH (ENSPTIG00000014696)	CPQ (ENSPTIG00000014176)
Cat	MODERN SPECIES	249	KLF10 (ENSFCAG00000026958)	ODF1 (ENSFCAG00000042534)	UBR5 (ENSFCAG00000011214)	RRM2B (ENSFCAG00000028214)	NCALD (ENSFCAG00000026528)	GRHL2 (ENSFCAG00000004963)	ZNF706 (ENSFCAG00000046823)	YWHAZ (ENSFCAG00000037073)	PABPC1 (ENSFCAG00000001874)	SNX31 (ENSFCAG00000001873)	ANKRD46 (ENSFCAG00000023210)	RNF19A (ENSFCAG00000001871)	ENSFCAG00000042618	SPAG1 (ENSFCAG00000001870)	POLR2K (ENSFCAG00000039453)	FBXO43 (ENSFCAG00000001868) ##22	ENSFCAG00000047384	RGS22 (ENSFCAG00000029761)	ENSFCAG00000038141	VPS13B (ENSFCAG00000011045)	OSR2 (ENSFCAG00000014220)	STK3 (ENSFCAG00000022780)	KCNS2 (ENSFCAG00000029606)	NIPAL2 (ENSFCAG00000031093)	POP1 (ENSFCAG00000002168)	RIDA (ENSFCAG00000002167)	ENSFCAG00000041699	ENSFCAG00000002165	MATN2 (ENSFCAG00000002164)	LAPTM4B (ENSFCAG00000040131)	MTDH (ENSFCAG00000022136)
Laurasiatheria_c	ANCESTRAL SPECIES	19	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Chiroptera	ANCESTRAL SPECIES	27	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Microchiroptera	ANCESTRAL SPECIES	27	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862
Greater horseshoe bat	MODERN SPECIES	5	UBR5 (ENSRFEG00010019728)	RRM2B (ENSRFEG00010019621)	NCALD (ENSRFEG00010019578)	GRHL2 (ENSRFEG00010019555)	ENSRFEG00010019533	ENSRFEG00010019510	ENSRFEG00010019469	ZNF706 (ENSRFEG00010019443)	YWHAZ (ENSRFEG00010019368)	PABPC1 (ENSRFEG00010018981)	SNX31 (ENSRFEG00010018757)	ANKRD46 (ENSRFEG00010018712)	RNF19A (ENSRFEG00010018669)	SPAG1 (ENSRFEG00010018396)	ENSRFEG00010018329	FBXO43 (ENSRFEG00010018248) ##22	RGS22 (ENSRFEG00010017161)	ENSRFEG00010017088	VPS13B (ENSRFEG00010016767)	OSR2 (ENSRFEG00010016629)	STK3 (ENSRFEG00010016550)	KCNS2 (ENSRFEG00010016528)	NIPAL2 (ENSRFEG00010016437)	POP1 (ENSRFEG00010016389)	ENSRFEG00010016340	ERICH5 (ENSRFEG00010016246)	RPL30 (ENSRFEG00010016148)	ENSRFEG00010016135	MATN2 (ENSRFEG00010016062)	LAPTM4B (ENSRFEG00010015916)	MTDH (ENSRFEG00010015577)
Microbat	MODERN SPECIES	1231														RNF19A (ENSMLUG00000008606)	SPAG1 (ENSMLUG00000008559)	FBXO43 (ENSMLUG00000008544) ##22	RGS22 (ENSMLUG00000005800)	COX6C (ENSMLUG00000014896)	VPS13B (ENSMLUG00000001663)	ENSMLUG00000028149	OSR2 (ENSMLUG00000013412)	STK3 (ENSMLUG00000002928)	KCNS2 (ENSMLUG00000002923)	NIPAL2 (ENSMLUG00000023973)
Megabat	MODERN SPECIES	567													RNF19A (ENSPVAG00000009995)	SPAG1 (ENSPVAG00000009992)	POLR2K (ENSPVAG00000009991)	FBXO43 (ENSPVAG00000009990) ##22	RGS22 (ENSPVAG00000009988)
Atlantogenata	ANCESTRAL SPECIES	20	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b.g	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Afrotheria	ANCESTRAL SPECIES	10	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b.g	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00530000063692.a ##22	ENSGT00390000008918.b	ENSGT00500000044936	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a
Afrotheria_a	ANCESTRAL SPECIES	10	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00440000038909	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.b.g	ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00530000063692.a ##22	ENSGT00940000162275	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000010783	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110
Elephant	MODERN SPECIES	567	KLF10 (ENSLAFG00000000037)	ODF1 (ENSLAFG00000006099)	ENSLAFG00000028819	ENSLAFG00000026912	RRM2B (ENSLAFG00000014771)	NCALD (ENSLAFG00000026012)	GRHL2 (ENSLAFG00000010356)	ZNF706 (ENSLAFG00000002570)	YWHAZ (ENSLAFG00000004944)	ENSLAFG00000026949	PABPC1 (ENSLAFG00000013994)	SNX31 (ENSLAFG00000013988)	ANKRD46 (ENSLAFG00000013984)	RNF19A (ENSLAFG00000004783)	SPAG1 (ENSLAFG00000014900)	FBXO43 (ENSLAFG00000009433) ##22	COX6C (ENSLAFG00000009430)	VPS13B (ENSLAFG00000009422)	OSR2 (ENSLAFG00000009420)	STK3 (ENSLAFG00000005346)	NIPAL2 (ENSLAFG00000007053)	POP1 (ENSLAFG00000010770)	RIDA (ENSLAFG00000002078)	ERICH5 (ENSLAFG00000021626)	ENSLAFG00000002077	MATN2 (ENSLAFG00000005628)	LAPTM4B (ENSLAFG00000005622)	MTDH (ENSLAFG00000003855)	TSPYL5 (ENSLAFG00000001732)	CPQ (ENSLAFG00000018608)	SDC2 (ENSLAFG00000011079)
Xenarthra	ANCESTRAL SPECIES	314										ENSGT00940000153773.a.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.b	ENSGT00940000164643	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000163089	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344
Sloth	MODERN SPECIES	2530																FBXO43 (ENSCHOG00000004350) ##22	RGS22 (ENSCHOG00000004322)
Armadillo	MODERN SPECIES	1435										PABPC1 (ENSDNOG00000008718)	SNX31 (ENSDNOG00000014662)	ANKRD46 (ENSDNOG00000039180)	RNF19A (ENSDNOG00000004532)	ENSDNOG00000047429	ENSDNOG00000007079	FBXO43 (ENSDNOG00000015241) ##22	RGS22 (ENSDNOG00000007052)	ENSDNOG00000039386	VPS13B (ENSDNOG00000006649)	OSR2 (ENSDNOG00000012011)	ENSDNOG00000044727	STK3 (ENSDNOG00000040284)	KCNS2 (ENSDNOG00000014067)
Platypus	MODERN SPECIES	15	KLF10 (ENSOANG00000013800)	ODF1 (ENSOANG00000046954)	UBR5 (ENSOANG00000013340)	RRM2B (ENSOANG00000001870)	NCALD (ENSOANG00000051353)	GRHL2 (ENSOANG00000004305)	ZNF706 (ENSOANG00000042992)	YWHAZ (ENSOANG00000036791)	ENSOANG00000007307	SNX31 (ENSOANG00000022318)	ANKRD46 (ENSOANG00000040223)	ENSOANG00000041897	RNF19A (ENSOANG00000001803)	SPAG1 (ENSOANG00000021884)	POLR2K (ENSOANG00000038344)	FBXO43 (ENSOANG00000008449) ##22	RGS22 (ENSOANG00000013268)	ENSOANG00000042924	VPS13B (ENSOANG00000013271)	OSR2 (ENSOANG00000041485)	STK3 (ENSOANG00000021991)	KCNS2 (ENSOANG00000047278)	NIPAL2 (ENSOANG00000049265)	POP1 (ENSOANG00000001278)	RIDA (ENSOANG00000021532)	ENSOANG00000047660	MATN2 (ENSOANG00000003682)	LAPTM4B (ENSOANG00000003683)	MTDH (ENSOANG00000003684)	CPQ (ENSOANG00000029705)	SDC2 (ENSOANG00000046175)
Anura	ANCESTRAL SPECIES	10	ENSGT00390000004263.a	ENSGT00950000182995.e.b	ENSGT00940000159405	ENSGT00940000156357	ENSGT00390000013305.a.b	ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.b	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000157094	ENSGT00940000158703	ENSGT00940000154697.a.b	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000165514	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.a	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110
Frog	MODERN SPECIES	6	rpl30 (ENSXETG00000036866)	rida (ENSXETG00000037413)	pop1 (ENSXETG00000039843)	nipal2 (ENSXETG00000038198)	KCNS2 (ENSXETG00000045694)	stk3 (ENSXETG00000017844)	osr2 (ENSXETG00000017850)	vps13b (ENSXETG00000017855)	cox6c (ENSXETG00000025937)	rgs22 (ENSXETG00000017863)	snx31 (ENSXETG00000017864)	ankrd46 (ENSXETG00000030822)	rnf19a (ENSXETG00000017873)	ENSXETG00000046785	spag1 (ENSXETG00000017876)	fbxo43 (ENSXETG00000017882) ##22	frat1 (ENSXETG00000035190)	polr2k (ENSXETG00000025929)	esrp1 (ENSXETG00000014667)	cibar1 (ENSXETG00000014666)	virma (ENSXETG00000014668)	ENSXETG00000015384	FSBP (ENSXETG00000048890)	rad54b (ENSXETG00000025924)	gem (ENSXETG00000014678)	cdh17 (ENSXETG00000014682)	ENSXETG00000039850	pdp1 (ENSXETG00000041992)	tmem67 (ENSXETG00000014689)	rbm12b.1 (ENSXETG00000025920)	rbm12b.2 (ENSXETG00000014696)
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000022926	ENSLLEG00000022875	GRHL2 (ENSLLEG00000021795)	ENSLLEG00000021698	ENSLLEG00000021668	ZNF706 (ENSLLEG00000021612)	ENSLLEG00000021423	ENSLLEG00000020957	SNX31 (ENSLLEG00000020694)	ANKRD46 (ENSLLEG00000020629)	ENSLLEG00000020599	RNF19A (ENSLLEG00000020333)	ENSLLEG00000020293	SPAG1 (ENSLLEG00000019184)	ENSLLEG00000019053	FBXO43 (ENSLLEG00000018985) ##22	RGS22 (ENSLLEG00000018029)	ENSLLEG00000017948	ENSLLEG00000017840	VPS13B (ENSLLEG00000017351)	OSR2 (ENSLLEG00000017230)	STK3 (ENSLLEG00000015996)	ENSLLEG00000015849	ENSLLEG00000015828	AGO2 (ENSLLEG00000015411)	ENSLLEG00000015343	PTK2 (ENSLLEG00000013830)	DENND3 (ENSLLEG00000013633)	ENSLLEG00000013580	ENSLLEG00000013555	ENSLLEG00000013531
Coelacanth	MODERN SPECIES	477													RNF19A (ENSLACG00000016189)	ENSLACG00000015827	POLR2K (ENSLACG00000015753)	FBXO43 (ENSLACG00000015541) ##22	RGS22 (ENSLACG00000015158)	ENSLACG00000013793	ENSLACG00000012367	ENSLACG00000006190	OSR2 (ENSLACG00000005426)	stk3 (ENSLACG00000001756)
Actinopterygii	ANCESTRAL SPECIES	93							ENSGT00940000158862	ENSGT00940000155788	ENSGT00390000003465.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000153773.b	ENSGT00950000183212.A	ENSGT00940000158703	ENSGT00940000154697.a.a	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.C	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.b	ENSGT00390000018110	ENSGT00940000157222.a
Neopterygii	ANCESTRAL SPECIES	90	ENSGT00390000005711	ENSGT00920000149145	ENSGT00390000018094	ENSGT00940000158485	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00390000008918	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.A	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.b
Osteoglossocephalai	ANCESTRAL SPECIES	44	ENSGT00390000018094	ENSGT00940000158485	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.A	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b	ENSGT00940000159405
Osteoglossiformes	ANCESTRAL SPECIES	20	ENSGT00510000048187	ENSGT00940000153393.A.o	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435.a.b	ENSGT00940000158862.e	ENSGT00940000155788.k	ENSGT00940000169819	ENSGT01090000260040.b.b.a.a.b	ENSGT00940000160311.a.a	ENSGT00940000158703.k.b	ENSGT00390000003465.b.b.a	ENSGT01090000260040.b.b.a.b	ENSGT00940000158703.l	ENSGT00940000154697.a.a.a.b	ENSGT00530000063692.a ##22	ENSGT00940000172596	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000154984.A	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.a.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b	ENSGT00940000156357.j	ENSGT00940000159405
Asian bonytongue	MODERN SPECIES	9	fam210ab (ENSSFOG00015026874)	ldlrad4b (ENSSFOG00015027111)	SEH1L (ENSSFOG00015025567)	ptpn2a (ENSSFOG00015006429)	ENSSFOG00015029655	cep76 (ENSSFOG00015006465)	id4 (ENSSFOG00015029880)	ncalda (ENSSFOG00015006538)	grhl2a (ENSSFOG00015006560)	ENSSFOG00015006571	ENSSFOG00015006587	ENSSFOG00015006617	pabpc1a (ENSSFOG00015006662)	rnf19a (ENSSFOG00015006845)	spag1a (ENSSFOG00015026571)	fbxo43 (ENSSFOG00015007114) ##22	RGS22 (ENSSFOG00015007128)	ENSSFOG00015007305	VPS13B (ENSSFOG00015007142)	osr2 (ENSSFOG00015007324)	stk3 (ENSSFOG00015007339)	KCNS2 (ENSSFOG00015007382)	NIPAL2 (ENSSFOG00015007400)	POP1 (ENSSFOG00015007429)	RIDA (ENSSFOG00015025214)	rpl30 (ENSSFOG00015007474)	MATN2 (ENSSFOG00015026308)	LAPTM4B (ENSSFOG00015007531)	mtdha (ENSSFOG00015033320)	KLF10 (ENSSFOG00015007589)	azin1b (ENSSFOG00015007644)
P. kingsleyae	MODERN SPECIES	1	ENSPKIG00000017245	ptpn2a (ENSPKIG00000017135)	cep76 (ENSPKIG00000017067)	ID4 (ENSPKIG00000017036)	ncalda (ENSPKIG00000017001)	grhl2a (ENSPKIG00000016954)	znf706 (ENSPKIG00000016927)	ENSPKIG00000016882	ENSPKIG00000016868	ENSPKIG00000016850	ENSPKIG00000016835	ENSPKIG00000016810	ENSPKIG00000016801	rnf19a (ENSPKIG00000016770)	spag1a (ENSPKIG00000016729)	FBXO43 (ENSPKIG00000016709) ##22	ENSPKIG00000016686	ENSPKIG00000016656	VPS13B (ENSPKIG00000016567)	osr2 (ENSPKIG00000016499)	KCNS2 (ENSPKIG00000016468)	stk3 (ENSPKIG00000016383)	POP1 (ENSPKIG00000016325)	RIDA (ENSPKIG00000016300)	rpl30 (ENSPKIG00000016284)	MATN2 (ENSPKIG00000016233)	LAPTM4B (ENSPKIG00000016191)	ENSPKIG00000016174	ubr5 (ENSPKIG00000016015)	ENSPKIG00000015931	azin1b (ENSPKIG00000015901)
Clupeocephala	ANCESTRAL SPECIES	24	ENSGT00390000018094	ENSGT00940000158485	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00390000012138.a.b.c.b	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab
Otomorpha	ANCESTRAL SPECIES	80														ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00390000008918	ENSGT00940000154984.A	ENSGT00420000029792.qb.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00390000012138.a.b.c.b	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a
Clupeiformes	ANCESTRAL SPECIES		ENSGT00520000055567.b	ENSGT01060000248591.b.b	ENSGT00940000153560.b.a.b	ENSGT00390000004322	ENSGT00940000167238	ENSGT00390000018821	ENSGT01050000245031	ENSGT00940000161250	ENSGT00940000159540.d	ENSGT00510000046803.b.a.a	ENSGT01100000263524.B.a.a.e	ENSGT00940000160311.a.a	ENSGT00940000158703.r	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a.m	ENSGT00390000012138.a.b.c.b	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000013853.c
Atlantic herring	MODERN SPECIES	2	ENSCHAG00000011360	ENSCHAG00000011416	ENSCHAG00000011446	zgc:158689 (ENSCHAG00000011456)	ndufa3 (ENSCHAG00000011495)	tfpt (ENSCHAG00000011499)	mrpl51 (ENSCHAG00000011504)	ENSCHAG00000011511	tnfrsf1a (ENSCHAG00000011522)	IFFO1 (ENSCHAG00000011536)	opn9 (ENSCHAG00000011543)	pabpc1a (ENSCHAG00000011573)	RNF19A (ENSCHAG00000012117)	ENSCHAG00000012132	ENSCHAG00000012191	fbxo43 (ENSCHAG00000012222) ##22	ENSCHAG00000012233	osr2 (ENSCHAG00000012333)	stk3 (ENSCHAG00000012365)	KCNS2 (ENSCHAG00000012541)	NIPAL2 (ENSCHAG00000012549)	POP1 (ENSCHAG00000012569)	elp6 (ENSCHAG00000012581)	ENSCHAG00000012613	SMARCC1 (ENSCHAG00000012695)	ENSCHAG00000015377	ENSCHAG00000015386	ENSCHAG00000015449	ENSCHAG00000015477	ENSCHAG00000015708	ENSCHAG00000015731
Denticle herring	MODERN SPECIES	15	ENSDCDG00000020084	ENSDCDG00000020088	ENSDCDG00000020102	zgc:158689 (ENSDCDG00000020105)	ndufa3 (ENSDCDG00000020123)	tfpt (ENSDCDG00000020125)	mrpl51 (ENSDCDG00000020127)	ENSDCDG00000020128	ENSDCDG00000020131	tnfrsf1a (ENSDCDG00000020137)	IFFO1 (ENSDCDG00000020155)	opn9 (ENSDCDG00000020159)	pabpc1a (ENSDCDG00000020188)	RNF19A (ENSDCDG00000020403)	ENSDCDG00000020656	FBXO43 (ENSDCDG00000020657) ##22	RGS22 (ENSDCDG00000020660)	osr2 (ENSDCDG00000020670)	ENSDCDG00000020676	STK3 (ENSDCDG00000020678)	ENSDCDG00000020679	KCNS2 (ENSDCDG00000020681)	NIPAL2 (ENSDCDG00000020687)	RIDA (ENSDCDG00000020699)	ENSDCDG00000020705	MATN2 (ENSDCDG00000020717)	LAPTM4B (ENSDCDG00000020725)	ENSDCDG00000020727	ubr5 (ENSDCDG00000020743)	KLF10 (ENSDCDG00000020793)	azin1a (ENSDCDG00000020805)
Otophysi	ANCESTRAL SPECIES	285						ENSGT00390000015035	ENSGT00510000047412.a	ENSGT00390000010641.i.a	ENSGT00940000160219	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT01060000248708.a	ENSGT00940000154947.l	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000158485
Characiphysae	ANCESTRAL SPECIES	49	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a	ENSGT00690000103873	ENSGT00940000157062	ENSGT00940000160806	ENSGT00940000154947.l	ENSGT01060000248708.a	ENSGT00940000161506	ENSGT00390000008859.b.c	ENSGT00940000154743.A.a.a	ENSGT00940000160219	ENSGT00390000010641.i.a	ENSGT00510000047412.a	ENSGT00390000015035	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936
Characiphysae_b	ANCESTRAL SPECIES	105	ENSGT00940000157473.b.b	ENSGT00950000183084.b.a.a.a	ENSGT00690000103873	ENSGT00940000157062	ENSGT00940000160806	ENSGT00940000154947.l	ENSGT01060000248708.a	ENSGT00940000161506	ENSGT00390000008859.b.c	ENSGT00940000154743.A.a.a	ENSGT00940000160219	ENSGT00390000010641.i.a	ENSGT00510000047412.a	ENSGT00390000015035	ENSGT00940000154697.a.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936
Characoidei	ANCESTRAL SPECIES	95			ENSGT00690000103873	ENSGT00940000157062	ENSGT00940000160806	ENSGT00940000154947.l	ENSGT01060000248708.a	ENSGT00940000161506	ENSGT00390000008859.b.c	ENSGT00940000154743.A.a.a	ENSGT00940000160219	ENSGT00390000010641.i.a	ENSGT00510000047412.a	ENSGT00390000015035	ENSGT00940000154697.a.a.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000160837	ENSGT00940000157657.d	ENSGT00950000183207.a	ENSGT00940000155829	ENSGT00940000159846.a.b	ENSGT00940000159742.sb	ENSGT01060000248931	ENSGT00940000154805.b.g.e.a.f	ENSGT00940000154805.b.g.e.a.e	ENSGT00940000160959	ENSGT00940000167861	ENSGT01030000234528.B.b.a.a.b	ENSGT00390000005979.a	ENSGT00920000149157.d
Red-bellied piranha	MODERN SPECIES	200	ENSPNAG00000005336	ENSPNAG00000021549	SLC39A1 (ENSPNAG00000021565)	ENSPNAG00000021582	ENSPNAG00000021591	ENSPNAG00000021600	clk2b (ENSPNAG00000021616)	cyp11c1 (ENSPNAG00000021651)	pklr (ENSPNAG00000021759)	ENSPNAG00000003703	zbtb7b (ENSPNAG00000022036)	NDUFV1 (ENSPNAG00000022076)	khdc4 (ENSPNAG00000022091)	malsu1 (ENSPNAG00000022117)	ENSPNAG00000022145	fbxo43 (ENSPNAG00000022193) ##22	ENSPNAG00000022222	GFOD1 (ENSPNAG00000022248)	SLC12A7 (ENSPNAG00000022341)	aoc1 (ENSPNAG00000022370)	ENSPNAG00000022666	KCNH2 (ENSPNAG00000022778)	ENSPNAG00000022827	MYH6 (ENSPNAG00000026307)	ENSPNAG00000026549	ENSPNAG00000026704	ENSPNAG00000026734	ENSPNAG00000004100	ENSPNAG00000026917	ENSPNAG00000026980	cebp1 (ENSPNAG00000026993)
Electric eel	MODERN SPECIES	6									ENSEEEG00000008378	ENSEEEG00000008377	ENSEEEG00000008367	TMEM14C (ENSEEEG00000008363)	pak1ip1 (ENSEEEG00000008357)	pck2 (ENSEEEG00000007517)	psme1 (ENSEEEG00000007469)	fbxo43 (ENSEEEG00000007468) ##22	spint1b (ENSEEEG00000007467)	si:dkey-174m14.3 (ENSEEEG00000007465)	ENSEEEG00000007461	ENSEEEG00000007460	kcnk5b (ENSEEEG00000007457)	ENSEEEG00000007454	ENSEEEG00000007453	timd4 (ENSEEEG00000007451)	ENSEEEG00000007449	fam53c (ENSEEEG00000007446)	slbp2 (ENSEEEG00000007444)	zmat2 (ENSEEEG00000007442)	lcp2a (ENSEEEG00000007439)	foxi3a (ENSEEEG00000007438)	nhp2 (ENSEEEG00000007437)
Channel catfish	MODERN SPECIES									khdc4 (ENSIPUG00000000039)	ENSIPUG00000000041	pklr (ENSIPUG00000000042)	cyp11c1 (ENSIPUG00000000043)	ENSIPUG00000000044	clk2b (ENSIPUG00000000045)	malsu1 (ENSIPUG00000000046)	spag1b (ENSIPUG00000000047)	fbxo43 (ENSIPUG00000000048) ##22	CREB3L4 (ENSIPUG00000000049)	ENSIPUG00000000050	ENSIPUG00000000051	C1R (ENSIPUG00000000052)	rbp5 (ENSIPUG00000000053)	PTPN6 (ENSIPUG00000000054)	ENSIPUG00000000055	ENSIPUG00000000056	ENSIPUG00000000057	wnt4b (ENSIPUG00000000059)	phc1 (ENSIPUG00000000060)	rps9 (ENSIPUG00000000061)	ENSIPUG00000000062	ENSIPUG00000000063	ENSIPUG00000000064
Cyprinoidei	ANCESTRAL SPECIES	182	ENSGT00940000158485	ENSGT00390000017478	ENSGT00940000159321	ENSGT00940000160344	ENSGT00940000160530	ENSGT00940000154684	ENSGT00500000044936	ENSGT00390000015035	ENSGT00510000047412.a	ENSGT00940000160219	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT00940000154947.l	ENSGT00940000154697.b	ENSGT00530000063692.a ##22
Cyprininae	ANCESTRAL SPECIES	929											ENSGT00390000010652.A.a.a.s	ENSGT00940000154947.l	ENSGT01060000248708.a	ENSGT00940000160219.c	ENSGT00510000047412.a.h	ENSGT00530000063692.a ##22
Cyprininae_a	ANCESTRAL SPECIES	740												ENSGT00390000010652.A.a.a.s	ENSGT00940000154947.l	ENSGT00940000160219.c	ENSGT00510000047412.a.h	ENSGT00530000063692.a ##22
Common carp reference	MODERN SPECIES	47	ENSCCRG00000070223	ENSCCRG00000077715	ENSCCRG00000055145	ENSCCRG00000065514	ENSCCRG00000069116	ENSCCRG00000021417	ENSCCRG00000075267	ENSCCRG00000003135	ENSCCRG00000063406	ENSCCRG00000080775	ENSCCRG00000008901	ENSCCRG00000059795	ENSCCRG00000002397	ENSCCRG00000068847	ENSCCRG00000027575	ENSCCRG00000027566 ##22	ENSCCRG00000004221	ENSCCRG00000025937
Golden-line barbel	MODERN SPECIES	994											ENSSGRG00000032704	HDGFL3 (ENSSGRG00000032695)	zbtb7b (ENSSGRG00000032690)	khdc4 (ENSSGRG00000032685)	spag1b (ENSSGRG00000032678)	fbxo43 (ENSSGRG00000032677) ##22	ENSSGRG00000032676	osr2 (ENSSGRG00000032670)	KCNS2 (ENSSGRG00000032668)	ENSSGRG00000032666
Goldfish	MODERN SPECIES	7	ENSCARG00000020434	ENSCARG00000020450	ENSCARG00000020503	ENSCARG00000001982	ENSCARG00000001990	ENSCARG00000002012	DENND4B (ENSCARG00000002069)	ENSCARG00000002245	ENSCARG00000002258	clk2b (ENSCARG00000002335)	ENSCARG00000002517	pklr (ENSCARG00000002571)	ENSCARG00000002835	zbtb7b (ENSCARG00000002850)	khdc4 (ENSCARG00000002856)	fbxo43 (ENSCARG00000002861) ##22	ENSCARG00000002878	osr2 (ENSCARG00000002909)	ENSCARG00000002911	ENSCARG00000002915	ENSCARG00000002922	DCSTAMP (ENSCARG00000002928)	RIMS2 (ENSCARG00000003057)	ENSCARG00000004291	FAM83A (ENSCARG00000004312)	ENSCARG00000004322	upk1a (ENSCARG00000004329)	ENSCARG00000004347	ENSCARG00000004369	rbm42 (ENSCARG00000004435)	cd22 (ENSCARG00000004451)
Zebrafish	MODERN SPECIES	7	znrf2b (ENSDARG00000098792)	fzd1 (ENSDARG00000106062)	cdk14 (ENSDARG00000074665)	ENSDARG00000113801	xrcc1 (ENSDARG00000009494)	drd2l (ENSDARG00000014858)	ethe1 (ENSDARG00000005713)	ENSDARG00000100043	osr2 (ENSDARG00000038006)	pklr (ENSDARG00000042010)	cyp11c1 (ENSDARG00000042014)	clk2b (ENSDARG00000059870)	fzd6 (ENSDARG00000104874)	DENND4B (ENSDARG00000102914)	spag1b (ENSDARG00000069499)	fbxo43 (ENSDARG00000104186) ##22	ENSDARG00000102087	ENSDARG00000102438	malsu1 (ENSDARG00000091079)	khdc4 (ENSDARG00000035023)	zbtb7b (ENSDARG00000021891)	pabpc1a (ENSDARG00000017219)	nr0b2a (ENSDARG00000044685)	ENSDARG00000079834	tpbgl (ENSDARG00000114338)	tmem222a (ENSDARG00000069589)	wdtc1 (ENSDARG00000059760)	cndp1 (ENSDARG00000069583)	ENSDARG00000077559	azi2 (ENSDARG00000102419)	cmc1 (ENSDARG00000103670)
Euteleosteomorpha	ANCESTRAL SPECIES	127	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT01090000260040.b.b.a.d	ENSGT01090000260061.c.a.d	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.x	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a
Acanthomorphata	ANCESTRAL SPECIES	52	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT01090000260040.b.b.a.d	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Euacanthomorphacea	ANCESTRAL SPECIES	28	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT01090000260040.b.b.a.d	ENSGT01090000260061.c.a.d.b.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Tiger tail seahorse	MODERN SPECIES	480											ncalda (ENSHCOG00000013434)	ENSHCOG00000013467	pabpc1a (ENSHCOG00000013502)	rnf19a (ENSHCOG00000013534)	ENSHCOG00000013540	FBXO43 (ENSHCOG00000013550) ##22	ENSHCOG00000013646	VPS13B (ENSHCOG00000013804)	osr2 (ENSHCOG00000013823)	KCNS2 (ENSHCOG00000013836)	NIPAL2 (ENSHCOG00000013854)	POP1 (ENSHCOG00000013888)	ENSHCOG00000013907	ENSHCOG00000013917	ubr5 (ENSHCOG00000014022)	azin1a (ENSHCOG00000014039)	atp6v1c1a (ENSHCOG00000014045)	ENSHCOG00000014059	ENSHCOG00000014070	rnf144b (ENSHCOG00000014090)	sqlea (ENSHCOG00000014116)
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Aplocheiloidei	ANCESTRAL SPECIES	26	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Mangrove rivulus	MODERN SPECIES	24	ldlrad4b (ENSKMAG00000000186)	ENSKMAG00000000230	ENSKMAG00000000278	CEP192 (ENSKMAG00000000312)	seh1l (ENSKMAG00000000335)	ptpn2a (ENSKMAG00000000396)	cep76 (ENSKMAG00000000418)	id4 (ENSKMAG00000000493)	ncalda (ENSKMAG00000000498)	grhl2a (ENSKMAG00000000522)	ZNF706 (ENSKMAG00000000533)	ENSKMAG00000000559	pabpc1a (ENSKMAG00000000605)	rnf19a (ENSKMAG00000000690)	ENSKMAG00000000753	FBXO43 (ENSKMAG00000000766) ##22	ENSKMAG00000000808	VPS13B (ENSKMAG00000000961)	osr2 (ENSKMAG00000001273)	ENSKMAG00000001313	KCNS2 (ENSKMAG00000001318)	NIPAL2 (ENSKMAG00000001326)	POP1 (ENSKMAG00000001346)	rida (ENSKMAG00000001365)	ENSKMAG00000001378	MATN2 (ENSKMAG00000001389)	LAPTM4B (ENSKMAG00000001399)	ENSKMAG00000001420	ubr5 (ENSKMAG00000001452)	ENSKMAG00000001692	azin1a (ENSKMAG00000001732)
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015008608	seh1l (ENSNFUG00015008618)	PTPN2A (ENSNFUG00015008624)	cep76 (ENSNFUG00015008630)	ID4 (ENSNFUG00015008674)	NCALDA (ENSNFUG00015008676)	ENSNFUG00015008681	ZNF706 (ENSNFUG00015008683)	Nfu_g_1_017359 (ENSNFUG00015008685)	ENSNFUG00015008722	RNF19A (ENSNFUG00015008883)	ENSNFUG00015008956	ENSNFUG00015008973	ENSNFUG00015008984	ENSNFUG00015008999	FBXO43 (ENSNFUG00015009021) ##22	ENSNFUG00015009102	ENSNFUG00015009125	VPS13B (ENSNFUG00015009212)	ENSNFUG00015009308	ENSNFUG00015009321	osr2 (ENSNFUG00015009326)	ENSNFUG00015009333	KCNS2 (ENSNFUG00015009346)	LAPTM4B (ENSNFUG00015009371)	ENSNFUG00015009383	ENSNFUG00015009387	ubr5 (ENSNFUG00015009582)	AZIN1A (ENSNFUG00015013283)	atp6v1c1a (ENSNFUG00015013291)	sqlea (ENSNFUG00015013380)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Poeciliinae	ANCESTRAL SPECIES	22	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.t	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Poecilia	ANCESTRAL SPECIES		ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008.f.a	ENSGT00940000158008.f.b	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.t	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a
NAME_6	ANCESTRAL SPECIES	90	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008.f.a	ENSGT00940000158008.f.b	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.t	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a
Sailfin molly	MODERN SPECIES	563								id4 (ENSPLAG00000004153)	ncalda (ENSPLAG00000004142)	grhl2a (ENSPLAG00000004132)	ZNF706 (ENSPLAG00000004124)	ENSPLAG00000004121	pabpc1a (ENSPLAG00000004114)	rnf19a (ENSPLAG00000004107)	ENSPLAG00000004082	ENSPLAG00000004077 ##22	ENSPLAG00000000071
Guppy	MODERN SPECIES	446	ADCK2 (ENSPREG00000019168)	DENND2A (ENSPREG00000019191)	TEAD4 (ENSPREG00000019275)	ENSPREG00000019295	mrps35 (ENSPREG00000019306)	ENSPREG00000019323	ENSPREG00000019345	ncalda (ENSPREG00000019365)	grhl2a (ENSPREG00000019373)	ENSPREG00000019387	ENSPREG00000019398	pabpc1a (ENSPREG00000019595)	rnf19a (ENSPREG00000020677)	ENSPREG00000020693	ENSPREG00000020712	FBXO43 (ENSPREG00000020741) ##22	ENSPREG00000020775	VPS13B (ENSPREG00000020825)	osr2 (ENSPREG00000020911)	KCNS2 (ENSPREG00000020923)	NIPAL2 (ENSPREG00000020935)	POP1 (ENSPREG00000020951)	rida (ENSPREG00000020963)	ENSPREG00000020984
Platyfish	MODERN SPECIES	17	ENSXMAG00000028472	fam210ab (ENSXMAG00000013813)	ldlrad4b (ENSXMAG00000002640)	CEP192 (ENSXMAG00000002611)	seh1l (ENSXMAG00000002610)	ptpn2a (ENSXMAG00000002596)	cep76 (ENSXMAG00000002590)	id4 (ENSXMAG00000027976)	ncalda (ENSXMAG00000024227)	ENSXMAG00000002574	ZNF706 (ENSXMAG00000003736)	ywhabl (ENSXMAG00000002570)	pabpc1a (ENSXMAG00000002555)	rnf19a (ENSXMAG00000002545)	ENSXMAG00000002533	FBXO43 (ENSXMAG00000029248) ##22	RGS22 (ENSXMAG00000002513)	VPS13B (ENSXMAG00000002500)	osr2 (ENSXMAG00000002498)	KCNS2 (ENSXMAG00000020015)	NIPAL2 (ENSXMAG00000021565)	POP1 (ENSXMAG00000002472)	rida (ENSXMAG00000028764)	MATN2 (ENSXMAG00000003255)	LAPTM4B (ENSXMAG00000003242)	ENSXMAG00000011490	ubr5 (ENSXMAG00000002429)	ENSXMAG00000002425	azin1a (ENSXMAG00000002403)	atp6v1c1a (ENSXMAG00000002385)	ENSXMAG00000002369
NAME_4	ANCESTRAL SPECIES	42	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.a.a.a	ENSGT00940000169819	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Mummichog	MODERN SPECIES	2302	fam210ab (ENSFHEG00000018678)	ldlrad4b (ENSFHEG00000018685)	ENSFHEG00000018691	ENSFHEG00000018729	seh1l (ENSFHEG00000018771)	ptpn2a (ENSFHEG00000018813)	cep76 (ENSFHEG00000018879)	ENSFHEG00000018895	id4 (ENSFHEG00000018904)	ENSFHEG00000000489	ENSFHEG00000018930	ywhaz (ENSFHEG00000018966)	pabpc1a (ENSFHEG00000018979)	RNF19A (ENSFHEG00000019039)	ENSFHEG00000019049	FBXO43 (ENSFHEG00000019058) ##22	RGS22 (ENSFHEG00000019070)	ENSFHEG00000019086	VPS13B (ENSFHEG00000019437)	osr2 (ENSFHEG00000019470)	KCNS2 (ENSFHEG00000019484)	NIPAL2 (ENSFHEG00000019502)	POP1 (ENSFHEG00000019518)	rida (ENSFHEG00000019554)	MATN2 (ENSFHEG00000019565)	LAPTM4B (ENSFHEG00000019602)	ENSFHEG00000019630	ubr5 (ENSFHEG00000019770)	ENSFHEG00000019783	azin1a (ENSFHEG00000019800)	atp6v1c1a (ENSFHEG00000019895)
Sheepshead minnow	MODERN SPECIES	1334													ENSCVAG00000014969	rnf19a (ENSCVAG00000014951)	ENSCVAG00000014906	ENSCVAG00000014843 ##22	ENSCVAG00000014816
Oryzias	ANCESTRAL SPECIES	66					ENSGT00940000158416.q.a	ENSGT00940000154686.b	ENSGT00390000000781.a	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703.t	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.u	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Oryzias_b	ANCESTRAL SPECIES	84					ENSGT00940000158416.q.a	ENSGT00940000154686.b	ENSGT00390000000781.a	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703.t	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.u	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Javanese ricefish	MODERN SPECIES	7	tpbgb (ENSOJAG00000002834)	ADCY3 (ENSOJAG00000002873)	zufsp (ENSOJAG00000003169)	WDR26 (ENSOJAG00000003253)	gprc6a (ENSOJAG00000004068)	ptpn2a (ENSOJAG00000004105)	cep76 (ENSOJAG00000004177)	id4 (ENSOJAG00000004258)	ncalda (ENSOJAG00000004279)	grhl2a (ENSOJAG00000004325)	ZNF706 (ENSOJAG00000004341)	ENSOJAG00000004390	pabpc1a (ENSOJAG00000004585)	rnf19a (ENSOJAG00000005063)	ENSOJAG00000005084	FBXO43 (ENSOJAG00000005098) ##22	RGS22 (ENSOJAG00000005106)	VPS13B (ENSOJAG00000005133)	osr2 (ENSOJAG00000005242)	ENSOJAG00000005272	KCNS2 (ENSOJAG00000005290)	ccng1 (ENSOJAG00000005297)	NIPAL2 (ENSOJAG00000005316)	rida (ENSOJAG00000005336)	ENSOJAG00000005349	MATN2 (ENSOJAG00000005428)	LAPTM4B (ENSOJAG00000005771)	ENSOJAG00000005787	ENSOJAG00000009806	azin1a (ENSOJAG00000009830)	atp6v1c1a (ENSOJAG00000009889)
Indian medaka	MODERN SPECIES	15	morf4l1 (ENSOMEG00000019799)	PIAS1 (ENSOMEG00000019860)	skor1b (ENSOMEG00000019886)	zgc:162898 (ENSOMEG00000019899)	iqch (ENSOMEG00000019948)	aagab (ENSOMEG00000019971)	smad3b (ENSOMEG00000020016)	smad6b (ENSOMEG00000020048)	ncalda (ENSOMEG00000020074)	ENSOMEG00000000761	ZNF706 (ENSOMEG00000020130)	ENSOMEG00000020153	pabpc1a (ENSOMEG00000020219)	rnf19a (ENSOMEG00000020280)	ENSOMEG00000020303	ENSOMEG00000020330 ##22	ENSOMEG00000020379	WDR26 (ENSOMEG00000020409)	zufsp (ENSOMEG00000020495)	ADCY3 (ENSOMEG00000020521)	cnot10 (ENSOMEG00000020550)	ano10a (ENSOMEG00000020591)	snrka (ENSOMEG00000000657)	si:ch211-198c19.1 (ENSOMEG00000020633)	dtnbp1a (ENSOMEG00000020674)	cndp1 (ENSOMEG00000020720)	ENSOMEG00000020732	ENSOMEG00000020747	pigu (ENSOMEG00000020777)	gmppb (ENSOMEG00000020863)	pde12 (ENSOMEG00000020900)
Oryzias_a	ANCESTRAL SPECIES	38	ENSGT01030000234527.A.a.a.a	ENSGT00940000153634.b.a	ENSGT00940000166924	ENSGT00940000158416.q.a	ENSGT00940000154686.b	ENSGT00390000000781.a	ENSGT00940000157742.a.h.a.a.a.b.a	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703.t	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357.v	ENSGT00940000156357.u	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a
Chinese medaka	MODERN SPECIES	116				zufsp (ENSOSIG00000017334)	gprc6a (ENSOSIG00000017331)	ptpn2a (ENSOSIG00000017329)	cep76 (ENSOSIG00000017076)	ENSOSIG00000016838	id4 (ENSOSIG00000016815)	ncalda (ENSOSIG00000016792)	ENSOSIG00000016784	ZNF706 (ENSOSIG00000016777)	ENSOSIG00000016773	pabpc1a (ENSOSIG00000013218)	ENSOSIG00000013182	FBXO43 (ENSOSIG00000013181) ##22	VPS13B (ENSOSIG00000013176)	osr2 (ENSOSIG00000013173)	KCNS2 (ENSOSIG00000013171)	NIPAL2 (ENSOSIG00000013169)	POP1 (ENSOSIG00000013167)	rida (ENSOSIG00000013165)	MATN2 (ENSOSIG00000013123)	LAPTM4B (ENSOSIG00000013122)	ENSOSIG00000013121	ENSOSIG00000013119	azin1a (ENSOSIG00000013103)	atp6v1c1a (ENSOSIG00000013047)	ENSOSIG00000013036	rnf144b (ENSOSIG00000013034)	sqlea (ENSOSIG00000011469)
Japanese Medaka HdrR	MODERN SPECIES	7	ptpn2a (ENSORLG00000002542)	cep76 (ENSORLG00000002558)	ENSORLG00000022446	ENSORLG00000028438	id4 (ENSORLG00000002567)	ENSORLG00000028340	ncalda (ENSORLG00000002589)	ENSORLG00000028383	ENSORLG00000002613	ZNF706 (ENSORLG00000002621)	ENSORLG00000002646	pabpc1a (ENSORLG00000002691)	rnf19a (ENSORLG00000002707)	ENSORLG00000002743	ENSORLG00000027468	FBXO43 (ENSORLG00000002759) ##22	ENSORLG00000002763	VPS13B (ENSORLG00000026747)	ENSORLG00000029997	osr2 (ENSORLG00000002797)	KCNS2 (ENSORLG00000002804)	NIPAL2 (ENSORLG00000002818)	POP1 (ENSORLG00000002839)	rida (ENSORLG00000022285)	MATN2 (ENSORLG00000002891)	LAPTM4B (ENSORLG00000002899)	ENSORLG00000002933	ubr5 (ENSORLG00000003009)	ENSORLG00000003025	azin1a (ENSORLG00000003069)	atp6v1c1a (ENSORLG00000003111)
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Pomacentridae	ANCESTRAL SPECIES	23	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187.db	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Pomacentridae_A	ANCESTRAL SPECIES	36	ENSGT00390000000724.c.b.c	ENSGT00510000048187.eb	ENSGT00510000048187.db	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781.c	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Amphiprion	ANCESTRAL SPECIES	109	ENSGT00390000000724.c.b.c	ENSGT00510000048187.eb	ENSGT00510000048187.db	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781.c	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000155982.f	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Clown anemonefish	MODERN SPECIES	999						ENSAOCG00000011885	ENSAOCG00000011872	ENSAOCG00000011752	ncalda (ENSAOCG00000011730)	ENSAOCG00000011708	ZNF706 (ENSAOCG00000011688)	ENSAOCG00000011675	pabpc1a (ENSAOCG00000011656)	rnf19a (ENSAOCG00000011632)	ENSAOCG00000011582	FBXO43 (ENSAOCG00000011555) ##22	ENSAOCG00000000719	VPS13B (ENSAOCG00000011440)	osr2 (ENSAOCG00000000699)	KCNS2 (ENSAOCG00000011007)	NIPAL2 (ENSAOCG00000010998)	POP1 (ENSAOCG00000010991)	rida (ENSAOCG00000000693)	MATN2 (ENSAOCG00000010914)	LAPTM4B (ENSAOCG00000010616)	ENSAOCG00000010593	ENSAOCG00000010576	ENSAOCG00000010546	azin1a (ENSAOCG00000010516)	atp6v1c1a (ENSAOCG00000010485)	ENSAOCG00000000648
Orange clownfish	MODERN SPECIES	21	ldlrad4b (ENSAPEG00000006574)	ENSAPEG00000006607	ENSAPEG00000006621	seh1l (ENSAPEG00000006662)	ptpn2a (ENSAPEG00000006677)	cep76 (ENSAPEG00000006733)	id4 (ENSAPEG00000006776)	ncalda (ENSAPEG00000006812)	ENSAPEG00000006832	ZNF706 (ENSAPEG00000006927)	ENSAPEG00000006949	pabpc1a (ENSAPEG00000006963)	rnf19a (ENSAPEG00000007034)	ENSAPEG00000007079	ENSAPEG00000007113	FBXO43 (ENSAPEG00000007154) ##22	ENSAPEG00000007220	VPS13B (ENSAPEG00000007328)	ENSAPEG00000007540	osr2 (ENSAPEG00000007554)	KCNS2 (ENSAPEG00000007565)	NIPAL2 (ENSAPEG00000007576)	POP1 (ENSAPEG00000007607)	rida (ENSAPEG00000007659)	MATN2 (ENSAPEG00000007695)	LAPTM4B (ENSAPEG00000007833)	ENSAPEG00000007869	ubr5 (ENSAPEG00000007895)	ENSAPEG00000008057	azin1a (ENSAPEG00000008065)	atp6v1c1a (ENSAPEG00000008090)
Spiny chromis	MODERN SPECIES	180															ENSAPOG00000008803	FBXO43 (ENSAPOG00000000234) ##22	ENSAPOG00000008686	VPS13B (ENSAPOG00000008624)	osr2 (ENSAPOG00000008249)	KCNS2 (ENSAPOG00000008220)	NIPAL2 (ENSAPOG00000008210)	POP1 (ENSAPOG00000008198)	rida (ENSAPOG00000008174)	MATN2 (ENSAPOG00000008131)	LAPTM4B (ENSAPOG00000007897)	ENSAPOG00000007844	ubr5 (ENSAPOG00000007770)	ENSAPOG00000007569	azin1a (ENSAPOG00000007545)	atp6v1c1a (ENSAPOG00000007513)	ENSAPOG00000007415
Bicolor damselfish	MODERN SPECIES	254	fam210ab (ENSSPAG00000014230)	ldlrad4b (ENSSPAG00000014241)	ENSSPAG00000014272	seh1l (ENSSPAG00000014300)	ptpn2a (ENSSPAG00000014311)	cep76 (ENSSPAG00000014361)	id4 (ENSSPAG00000014386)	ncalda (ENSSPAG00000014394)	grhl2a (ENSSPAG00000014408)	ZNF706 (ENSSPAG00000014430)	ENSSPAG00000014442	ENSSPAG00000014453	rnf19a (ENSSPAG00000014484)	ENSSPAG00000014530	ENSSPAG00000014549	FBXO43 (ENSSPAG00000014558) ##22	ENSSPAG00000014600	VPS13B (ENSSPAG00000014655)	ENSSPAG00000014901	ENSSPAG00000014912	osr2 (ENSSPAG00000014921)	KCNS2 (ENSSPAG00000014933)	NIPAL2 (ENSSPAG00000014941)	POP1 (ENSSPAG00000014955)	rida (ENSSPAG00000014984)	MATN2 (ENSSPAG00000015024)	LAPTM4B (ENSSPAG00000015048)	ENSSPAG00000015100	ubr5 (ENSSPAG00000015131)	ENSSPAG00000015244	azin1a (ENSSPAG00000015281)
Cichlidae	ANCESTRAL SPECIES	26	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00940000162287.A.j
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00940000162287.A.j
Haplochromini	ANCESTRAL SPECIES	58	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT01020000230438.A.e.a.m.b.b
Burton s mouthbrooder	MODERN SPECIES	384	fam210ab (ENSHBUG00000019900)	ldlrad4b (ENSHBUG00000000592)	ENSHBUG00000019948	ENSHBUG00000019958	seh1l (ENSHBUG00000020222)	ptpn2a (ENSHBUG00000020237)	cep76 (ENSHBUG00000020279)	id4 (ENSHBUG00000020288)	ncalda (ENSHBUG00000020311)	GRHL2 (ENSHBUG00000020365)	ZNF706 (ENSHBUG00000020382)	ENSHBUG00000020420	pabpc1a (ENSHBUG00000020487)	rnf19a (ENSHBUG00000020532)	ENSHBUG00000020541	FBXO43 (ENSHBUG00000020549) ##22	RGS22 (ENSHBUG00000020569)	VPS13B (ENSHBUG00000021487)	osr2 (ENSHBUG00000000903)	KCNS2 (ENSHBUG00000021560)	NIPAL2 (ENSHBUG00000021570)	POP1 (ENSHBUG00000021583)	rida (ENSHBUG00000021604)	MATN2 (ENSHBUG00000021616)	LAPTM4B (ENSHBUG00000021666)	ENSHBUG00000021690	ubr5 (ENSHBUG00000021803)	ENSHBUG00000000677	azin1a (ENSHBUG00000021900)	atp6v1c1a (ENSHBUG00000021972)	ENSHBUG00000021996
Haplochromini_A	ANCESTRAL SPECIES	64	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008.g.a	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT01020000230438.A.e.a.m.b.b
P. nyererei	MODERN SPECIES	420	fam210ab (ENSPNYG00000005534)	ldlrad4b (ENSPNYG00000005514)	CEP192 (ENSPNYG00000005466)	seh1l (ENSPNYG00000005432)	ptpn2a (ENSPNYG00000005413)	cep76 (ENSPNYG00000005376)	id4 (ENSPNYG00000005362)	ncalda (ENSPNYG00000005340)	grhl2a (ENSPNYG00000005293)	ZNF706 (ENSPNYG00000005282)	ENSPNYG00000005256	pabpc1a (ENSPNYG00000005192)	rnf19a (ENSPNYG00000005150)	ENSPNYG00000005119	ENSPNYG00000005080	FBXO43 (ENSPNYG00000005054) ##22	RGS22 (ENSPNYG00000004942)	VPS13B (ENSPNYG00000004591)	osr2 (ENSPNYG00000004536)	KCNS2 (ENSPNYG00000004524)	NIPAL2 (ENSPNYG00000004507)	POP1 (ENSPNYG00000004476)	rida (ENSPNYG00000004442)	MATN2 (ENSPNYG00000004311)	LAPTM4B (ENSPNYG00000004282)	ENSPNYG00000004272	ubr5 (ENSPNYG00000004164)	ENSPNYG00000004113	azin1a (ENSPNYG00000004085)	atp6v1c1a (ENSPNYG00000004031)	ENSPNYG00000004011
Haplochromini_B	ANCESTRAL SPECIES	79	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008.g.a	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00390000004263.a.d.a	ENSGT01020000230438.A.e.a.m.b.b
Eastern happy	MODERN SPECIES	2	fam210ab (ENSACLG00000008719)	ldlrad4b (ENSACLG00000008722)	ENSACLG00000009081	seh1l (ENSACLG00000009131)	ptpn2a (ENSACLG00000009154)	cep76 (ENSACLG00000009210)	ENSACLG00000009243	id4 (ENSACLG00000009338)	ncalda (ENSACLG00000009345)	ENSACLG00000009350	ZNF706 (ENSACLG00000009359)	ENSACLG00000009366	pabpc1a (ENSACLG00000009399)	rnf19a (ENSACLG00000009452)	ENSACLG00000010098	FBXO43 (ENSACLG00000010112) ##22	RGS22 (ENSACLG00000010123)	VPS13B (ENSACLG00000010710)	ENSACLG00000010887	osr2 (ENSACLG00000010895)	KCNS2 (ENSACLG00000010926)	NIPAL2 (ENSACLG00000010936)	POP1 (ENSACLG00000010951)	rida (ENSACLG00000010985)	MATN2 (ENSACLG00000011012)	LAPTM4B (ENSACLG00000011029)	ENSACLG00000011043	ubr5 (ENSACLG00000011122)	ENSACLG00000011325	azin1a (ENSACLG00000011317)	atp6v1c1a (ENSACLG00000011333)
Zebra mbuna	MODERN SPECIES	1093	mc5rb (ENSMZEG00005025396)	fam210ab (ENSMZEG00005025397)	ldlrad4b (ENSMZEG00005025398)	ENSMZEG00005025401	seh1l (ENSMZEG00005025403)	ptpn2a (ENSMZEG00005025406)	cep76 (ENSMZEG00005025408)	id4 (ENSMZEG00005025411)	ncalda (ENSMZEG00005025412)	ENSMZEG00005025413	ZNF706 (ENSMZEG00005025414)	ENSMZEG00005025415	pabpc1a (ENSMZEG00005025416)	rnf19a (ENSMZEG00005025419)	ENSMZEG00005025420	FBXO43 (ENSMZEG00005025422) ##22	ENSMZEG00005025423	VPS13B (ENSMZEG00005025428)	osr2 (ENSMZEG00005025443)	KCNS2 (ENSMZEG00005025444)	NIPAL2 (ENSMZEG00005025445)	POP1 (ENSMZEG00005025448)	rida (ENSMZEG00005025450)	MATN2 (ENSMZEG00005025451)	LAPTM4B (ENSMZEG00005025455)	ENSMZEG00005025457	ubr5 (ENSMZEG00005025460)	ENSMZEG00005025465	azin1a (ENSMZEG00005025463)	atp6v1c1a (ENSMZEG00005025467)	ENSMZEG00005025470
Lyretail cichlid	MODERN SPECIES	331	fam210ab (ENSNBRG00000003395)	ldlrad4b (ENSNBRG00000003381)	ENSNBRG00000003337	ENSNBRG00000003304	ENSNBRG00000003290	ptpn2a (ENSNBRG00000003283)	cep76 (ENSNBRG00000003246)	id4 (ENSNBRG00000003231)	ncalda (ENSNBRG00000003212)	ENSNBRG00000003159	ZNF706 (ENSNBRG00000003150)	ENSNBRG00000003138	ENSNBRG00000003068	rnf19a (ENSNBRG00000003021)	ENSNBRG00000002935	ENSNBRG00000002829 ##22	RGS22 (ENSNBRG00000002706)	VPS13B (ENSNBRG00000002486)	osr2 (ENSNBRG00000002444)	KCNS2 (ENSNBRG00000002432)	NIPAL2 (ENSNBRG00000002403)	POP1 (ENSNBRG00000002356)	rida (ENSNBRG00000002321)	MATN2 (ENSNBRG00000002186)	LAPTM4B (ENSNBRG00000002138)	ENSNBRG00000002125	ubr5 (ENSNBRG00000001982)	ENSNBRG00000001956	AZIN1 (ENSNBRG00000001916)	atp6v1c1a (ENSNBRG00000001891)	ENSNBRG00000001883
Nile tilapia	MODERN SPECIES	2	ldlrad4 (ENSONIG00000031466)	ENSONIG00000042725	ENSONIG00000038613	CEP192 (ENSONIG00000006896)	seh1l (ENSONIG00000006895)	ptpn2a (ENSONIG00000006890)	cep76 (ENSONIG00000006884)	id4 (ENSONIG00000006883)	ncalda (ENSONIG00000006880)	ENSONIG00000006874	ZNF706 (ENSONIG00000035397)	ENSONIG00000006873	ENSONIG00000006871	rnf19a (ENSONIG00000006869)	ENSONIG00000006867	FBXO43 (ENSONIG00000006866) ##22	RGS22 (ENSONIG00000006864)	VPS13B (ENSONIG00000006860)	osr2 (ENSONIG00000006859)	KCNS2 (ENSONIG00000020489)	NIPAL2 (ENSONIG00000031276)	POP1 (ENSONIG00000016445)	rida (ENSONIG00000016443)	MATN2 (ENSONIG00000016442)	LAPTM4B (ENSONIG00000016440)	ENSONIG00000016436	ubr5 (ENSONIG00000016431)	ENSONIG00000016428	azin1a (ENSONIG00000016427)	atp6v1c1a (ENSONIG00000016425)	ENSONIG00000031867
Midas cichlid	MODERN SPECIES	549	mc5rb (ENSACIG00000005051)	fam210ab (ENSACIG00000004995)	ldlrad4b (ENSACIG00000004981)	ENSACIG00000004956	seh1l (ENSACIG00000004838)	ptpn2a (ENSACIG00000004814)	cep76 (ENSACIG00000004785)	id4 (ENSACIG00000004781)	ncalda (ENSACIG00000004771)	grhl2a (ENSACIG00000004735)	ZNF706 (ENSACIG00000004726)	ENSACIG00000004711	pabpc1a (ENSACIG00000004685)	ENSACIG00000004667	ENSACIG00000004523	FBXO43 (ENSACIG00000004494) ##22	ENSACIG00000004438	VPS13B (ENSACIG00000004317)	osr2 (ENSACIG00000004285)	KCNS2 (ENSACIG00000004273)	NIPAL2 (ENSACIG00000004220)	POP1 (ENSACIG00000004169)	rida (ENSACIG00000004145)	MATN2 (ENSACIG00000004026)	LAPTM4B (ENSACIG00000003966)	ENSACIG00000003943	ubr5 (ENSACIG00000003786)	ENSACIG00000003767	azin1a (ENSACIG00000003639)	atp6v1c1a (ENSACIG00000003433)	ENSACIG00000003419
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Tetraodontidae	ANCESTRAL SPECIES	14	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00940000158819	ENSGT00390000017094	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357
Tetraodon	MODERN SPECIES	23			mc5rb (ENSTNIG00000013316)	fam210ab (ENSTNIG00000013315)	ldlrad4b (ENSTNIG00000000459)	ENSTNIG00000013314	seh1l (ENSTNIG00000013313)	ptpn2a (ENSTNIG00000013312)	ENSTNIG00000013311	ncalda (ENSTNIG00000013310)	GRHL2 (ENSTNIG00000013309)	ENSTNIG00000013308	pabpc1a (ENSTNIG00000013307)	rnf19a (ENSTNIG00000013306)	ENSTNIG00000013305	FBXO43 (ENSTNIG00000013304) ##22	VPS13B (ENSTNIG00000013303)	ENSTNIG00000001089	ENSTNIG00000001594	ENSTNIG00000013302	osr2 (ENSTNIG00000013301)	ENSTNIG00000013300	KCNS2 (ENSTNIG00000013299)	NIPAL2 (ENSTNIG00000013298)	POP1 (ENSTNIG00000013297)	MATN2 (ENSTNIG00000013295)	ENSTNIG00000013294	ENSTNIG00000013293	ubr5 (ENSTNIG00000013292)	azin1a (ENSTNIG00000005306)	rida (ENSTNIG00000013296)
Fugu	MODERN SPECIES	19	ENSTRUG00000030393	ENSTRUG00000027748	ENSTRUG00000030051	seh1l (ENSTRUG00000022150)	ptpn2 (ENSTRUG00000012316)	cep76 (ENSTRUG00000012223)	id4 (ENSTRUG00000025562)	ncalda (ENSTRUG00000024736)	ENSTRUG00000011936	ZNF706 (ENSTRUG00000011931)	ENSTRUG00000011774	ENSTRUG00000011577	rnf19a (ENSTRUG00000011384)	ENSTRUG00000019678	ENSTRUG00000011262	FBXO43 (ENSTRUG00000020193) ##22	ENSTRUG00000011182	VPS13B (ENSTRUG00000011132)	osr2 (ENSTRUG00000011070)	KCNS2 (ENSTRUG00000011051)	NIPAL2 (ENSTRUG00000023606)	POP1 (ENSTRUG00000010856)	rida (ENSTRUG00000010847)	MATN2 (ENSTRUG00000010697)	LAPTM4B (ENSTRUG00000010627)	ENSTRUG00000010517	ubr5 (ENSTRUG00000010399)	rnf144b (ENSTRUG00000009323)	oxr1b (ENSTRUG00000008898)	ENSTRUG00000020895	zfpm2a (ENSTRUG00000008754)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Ballan wrasse	MODERN SPECIES	116	ldlrad4b (ENSLBEG00000023662)	ENSLBEG00000023693	ENSLBEG00000023718	seh1l (ENSLBEG00000023762)	ptpn2a (ENSLBEG00000023795)	cep76 (ENSLBEG00000023818)	ENSLBEG00000023856	id4 (ENSLBEG00000023873)	ncalda (ENSLBEG00000023891)	ENSLBEG00000023915	ZNF706 (ENSLBEG00000023957)	ENSLBEG00000023978	ENSLBEG00000024002	rnf19a (ENSLBEG00000024036)	ENSLBEG00000024070	fbxo43 (ENSLBEG00000024161) ##22	ENSLBEG00000024193	VPS13B (ENSLBEG00000024272)	osr2 (ENSLBEG00000024396)	KCNS2 (ENSLBEG00000024412)	NIPAL2 (ENSLBEG00000024429)	POP1 (ENSLBEG00000024457)	ENSLBEG00000024487	ubr5 (ENSLBEG00000024613)	ENSLBEG00000024983	cyb5r4 (ENSLBEG00000025027)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Pike perch	MODERN SPECIES	40									ncalda (ENSSLUG00000008098)	ENSSLUG00000008050	ZNF706 (ENSSLUG00000008041)	ENSSLUG00000008033	pabpc1a (ENSSLUG00000006845)	rnf19a (ENSSLUG00000006701)	ENSSLUG00000006668	FBXO43 (ENSSLUG00000006655) ##22	ENSSLUG00000006632	VPS13B (ENSSLUG00000006563)	osr2 (ENSSLUG00000006539)	KCNS2 (ENSSLUG00000006535)	NIPAL2 (ENSSLUG00000006526)	POP1 (ENSSLUG00000006514)	rida (ENSSLUG00000006497)	MATN2 (ENSSLUG00000006481)	LAPTM4B (ENSSLUG00000006470)	ENSSLUG00000006459	ubr5 (ENSSLUG00000006281)	ENSSLUG00000006242	AZIN1 (ENSSLUG00000006230)	atp6v1c1a (ENSSLUG00000006176)	ENSSLUG00000006140
Channel bull blenny	MODERN SPECIES	7	fam210ab (ENSCGOG00000018605)	ldlrad4b (ENSCGOG00000018603)	CEP192 (ENSCGOG00000018596)	seh1l (ENSCGOG00000018538)	ptpn2a (ENSCGOG00000018531)	cep76 (ENSCGOG00000018443)	ENSCGOG00000018437	id4 (ENSCGOG00000018435)	ncalda (ENSCGOG00000018428)	GRHL2 (ENSCGOG00000018419)	ENSCGOG00000018415	pabpc1a (ENSCGOG00000017125)	rnf19a (ENSCGOG00000017068)	ENSCGOG00000017061	ENSCGOG00000017057	FBXO43 (ENSCGOG00000017056) ##22	ENSCGOG00000017054	VPS13B (ENSCGOG00000016378)	osr2 (ENSCGOG00000016352)	KCNS2 (ENSCGOG00000016350)	NIPAL2 (ENSCGOG00000016346)	POP1 (ENSCGOG00000016303)	rida (ENSCGOG00000016260)	ENSCGOG00000016257	MATN2 (ENSCGOG00000016249)	LAPTM4B (ENSCGOG00000016246)	ENSCGOG00000016242	ENSCGOG00000016235	ENSCGOG00000015624	azin1a (ENSCGOG00000015602)	ATP6V1C1 (ENSCGOG00000014890)
Cottioidei	ANCESTRAL SPECIES	29	ENSGT01030000234510.a.a.a.a.a.a.r	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a
Lumpfish	MODERN SPECIES	17	mc5rb (ENSCLMG00005006650)	fam210ab (ENSCLMG00005006638)	ldlrad4b (ENSCLMG00005006621)	ENSCLMG00005006620	seh1l (ENSCLMG00005006616)	ptpn2a (ENSCLMG00005006613)	cep76 (ENSCLMG00005006612)	id4 (ENSCLMG00005006610)	ncalda (ENSCLMG00005006609)	GRHL2 (ENSCLMG00005006544)	ENSCLMG00005006540	pabpc1a (ENSCLMG00005005905)	rnf19a (ENSCLMG00005005884)	ENSCLMG00005005878	ENSCLMG00005005876	FBXO43 (ENSCLMG00005005873) ##22	ENSCLMG00005005871	VPS13B (ENSCLMG00005005826)	osr2 (ENSCLMG00005005821)	KCNS2 (ENSCLMG00005005819)	NIPAL2 (ENSCLMG00005005818)	POP1 (ENSCLMG00005005817)	rida (ENSCLMG00005005814)	MATN2 (ENSCLMG00005005704)	LAPTM4B (ENSCLMG00005005701)	cep162 (ENSCLMG00005005699)	si:ch211-198c19.1 (ENSCLMG00005005697)	ADGRB1 (ENSCLMG00005005682)	ENSCLMG00005005675	ENSCLMG00005005674	cdk14 (ENSCLMG00005005673)
Stickleback	MODERN SPECIES	19	mc2r (ENSGACG00000003743)	mc5rb (ENSGACG00000003733)	fam210ab (ENSGACG00000003729)	ldlrad4b (ENSGACG00000003727)	ENSGACG00000003712	seh1l (ENSGACG00000003696)	ptpn2a (ENSGACG00000003692)	cep76 (ENSGACG00000003686)	id4 (ENSGACG00000003679)	ncalda (ENSGACG00000003671)	GRHL2 (ENSGACG00000003655)	ENSGACG00000003590	pabpc1a (ENSGACG00000003572)	rnf19a (ENSGACG00000003557)	ENSGACG00000003545	FBXO43 (ENSGACG00000003541) ##22	ENSGACG00000003538	ENSGACG00000003534	ENSGACG00000003528	ENSGACG00000003526	osr2 (ENSGACG00000003524)	KCNS2 (ENSGACG00000003519)	NIPAL2 (ENSGACG00000003506)	POP1 (ENSGACG00000003499)	ENSGACG00000003496	ENSGACG00000003494	ENSGACG00000003492	rps19 (ENSGACG00000003476)	apoc2 (ENSGACG00000003473)	apoa2 (ENSGACG00000003467)	ENSGACG00000003461
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT01030000234510.a.a.a.a.a.a.r	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT01030000234510.a.a.a.a.a.a.r	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Large yellow croaker	MODERN SPECIES	484	mc5rb (ENSLCRG00005002783)	fam210ab (ENSLCRG00005002776)	ldlrad4b (ENSLCRG00005002767)	CEP192 (ENSLCRG00005002740)	seh1l (ENSLCRG00005002172)	ptpn2a (ENSLCRG00005002163)	cep76 (ENSLCRG00005001780)	id4 (ENSLCRG00005001726)	ncalda (ENSLCRG00005001697)	grhl2a (ENSLCRG00005001373)	ZNF706 (ENSLCRG00005001367)	ENSLCRG00005001365	pabpc1a (ENSLCRG00005001129)	rnf19a (ENSLCRG00005000929)	ENSLCRG00005000903	FBXO43 (ENSLCRG00005000896) ##22	ENSLCRG00005000882	VPS13B (ENSLCRG00005000725)	osr2 (ENSLCRG00005000644)	KCNS2 (ENSLCRG00005000636)	NIPAL2 (ENSLCRG00005016376)	POP1 (ENSLCRG00005016340)	rida (ENSLCRG00005016328)	MATN2 (ENSLCRG00005016318)	LAPTM4B (ENSLCRG00005016308)	ENSLCRG00005016293	ubr5 (ENSLCRG00005015962)	ENSLCRG00005015850	azin1a (ENSLCRG00005015829)	atp6v1c1a (ENSLCRG00005015803)	ENSLCRG00005015746
Gilthead seabream	MODERN SPECIES	8	pop4 (ENSSAUG00010011696)	fam210ab (ENSSAUG00010011697)	ldlrad4b (ENSSAUG00010009084)	CEP192 (ENSSAUG00010009092)	seh1l (ENSSAUG00010009113)	ptpn2a (ENSSAUG00010009121)	cep76 (ENSSAUG00010009129)	id4 (ENSSAUG00010009383)	ncalda (ENSSAUG00010009385)	grhl2a (ENSSAUG00010009391)	ZNF706 (ENSSAUG00010009400)	ywhabl (ENSSAUG00010009404)	pabpc1a (ENSSAUG00010009407)	rnf19a (ENSSAUG00010009764)	ENSSAUG00010009765	FBXO43 (ENSSAUG00010009766) ##22	ENSSAUG00010009767	VPS13B (ENSSAUG00010009787)	osr2 (ENSSAUG00010009827)	KCNS2 (ENSSAUG00010009828)	NIPAL2 (ENSSAUG00010009830)	POP1 (ENSSAUG00010009832)	rida (ENSSAUG00010009834)	MATN2 (ENSSAUG00010009835)	LAPTM4B (ENSSAUG00010009838)	ENSSAUG00010009842	ubr5 (ENSSAUG00010009851)	ENSSAUG00010009903	azin1a (ENSSAUG00010009917)	atp6v1c1a (ENSSAUG00010009948)	ENSSAUG00010009998
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Carangaria	ANCESTRAL SPECIES	1	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Pleuronectoidei	ANCESTRAL SPECIES	36	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT01090000260061.c.a.d.b.a.a	ENSGT00940000160311.a.a.d	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Turbot	MODERN SPECIES		fam210ab (ENSSMAG00000013530)	ldlrad4b (ENSSMAG00000024611)	ENSSMAG00000022451	CEP192 (ENSSMAG00000010573)	SEH1L (ENSSMAG00000010604)	ptpn2a (ENSSMAG00000010638)	cep76 (ENSSMAG00000010648)	id4 (ENSSMAG00000035497)	ncalda (ENSSMAG00000028156)	GRHL2 (ENSSMAG00000010755)	ENSSMAG00000025081	ENSSMAG00000010803	RNF19A (ENSSMAG00000010882)	ENSSMAG00000011020	ENSSMAG00000029794	FBXO43 (ENSSMAG00000011089) ##22	ENSSMAG00000011117	VPS13B (ENSSMAG00000011345)	OSR2 (ENSSMAG00000011794)	KCNS2 (ENSSMAG00000010538)	NIPAL2 (ENSSMAG00000010528)	POP1 (ENSSMAG00000010467)	RIDA (ENSSMAG00000010449)	MATN2 (ENSSMAG00000010420)	LAPTM4B (ENSSMAG00000010374)	ENSSMAG00000010329	ubr5 (ENSSMAG00000010194)	ENSSMAG00000010181	atp6v1c1a (ENSSMAG00000010166)	ENSSMAG00000010080	ENSSMAG00000010035
Tongue sole	MODERN SPECIES	4	fzd6 (ENSCSEG00000013537)	klhl32 (ENSCSEG00000013512)	mms22l (ENSCSEG00000013481)	ldlrad4b (ENSCSEG00000013462)	ENSCSEG00000013450	seh1l (ENSCSEG00000013427)	ptpn2a (ENSCSEG00000013419)	cep76 (ENSCSEG00000013384)	id4 (ENSCSEG00000013378)	ncalda (ENSCSEG00000013364)	grhl2a (ENSCSEG00000013351)	ENSCSEG00000013338	pabpc1a (ENSCSEG00000013324)	rnf19a (ENSCSEG00000013313)	ENSCSEG00000013303	ENSCSEG00000013298 ##22	ENSCSEG00000013266	fam210ab (ENSCSEG00000013259)	mc5rb (ENSCSEG00000013252)	mc2r (ENSCSEG00000013247)	zdhhc3a (ENSCSEG00000013228)	ENSCSEG00000013214	ENSCSEG00000012987	stt3b (ENSCSEG00000012945)	ENSCSEG00000012931	popdc3 (ENSCSEG00000012927)	bves (ENSCSEG00000012920)	HACE1 (ENSCSEG00000012879)	GRIK2 (ENSCSEG00000012858)	ASCC3 (ENSCSEG00000012811)	sim1a (ENSCSEG00000012800)
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Seriola	ANCESTRAL SPECIES	16	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00990000204549
Greater amberjack	MODERN SPECIES	75	ldlrad4b (ENSSDUG00000006435)	ENSSDUG00000006461	seh1l (ENSSDUG00000006500)	ptpn2a (ENSSDUG00000006527)	cep76 (ENSSDUG00000006567)	id4 (ENSSDUG00000006581)	ncalda (ENSSDUG00000006591)	ENSSDUG00000006613	ZNF706 (ENSSDUG00000006637)	ENSSDUG00000006653	pabpc1a (ENSSDUG00000006675)	rnf19a (ENSSDUG00000006712)	ENSSDUG00000006777	VPS13B (ENSSDUG00000006879)	ENSSDUG00000007642	FBXO43 (ENSSDUG00000007668) ##22	ENSSDUG00000007732	osr2 (ENSSDUG00000007760)	KCNS2 (ENSSDUG00000007774)	NIPAL2 (ENSSDUG00000007789)	POP1 (ENSSDUG00000007817)	rida (ENSSDUG00000007850)	MATN2 (ENSSDUG00000007898)	LAPTM4B (ENSSDUG00000008032)	ENSSDUG00000008044	ubr5 (ENSSDUG00000008072)	ENSSDUG00000008161	azin1a (ENSSDUG00000008171)	atp6v1c1a (ENSSDUG00000008212)	ENSSDUG00000008249	ENSSDUG00000008256
Barramundi perch	MODERN SPECIES	103	fam210ab (ENSLCAG00010020020)	ldlrad4b (ENSLCAG00010020027)	ENSLCAG00010020039	seh1l (ENSLCAG00010020067)	ptpn2a (ENSLCAG00010020071)	cep76 (ENSLCAG00010020075)	id4 (ENSLCAG00010020081)	ncalda (ENSLCAG00010020088)	ENSLCAG00010020095	ZNF706 (ENSLCAG00010020097)	ENSLCAG00010020103	ENSLCAG00010020170	rnf19a (ENSLCAG00010020556)	ENSLCAG00010020606	ENSLCAG00010020613	FBXO43 (ENSLCAG00010020623) ##22	ENSLCAG00010020636	VPS13B (ENSLCAG00010020658)	osr2 (ENSLCAG00010020691)	KCNS2 (ENSLCAG00010020697)	NIPAL2 (ENSLCAG00010020699)	POP1 (ENSLCAG00010020706)	rida (ENSLCAG00010020711)	MATN2 (ENSLCAG00010020723)	LAPTM4B (ENSLCAG00010020735)	ENSLCAG00010020742	ubr5 (ENSLCAG00010021057)	ENSLCAG00010021666	AZIN1 (ENSLCAG00010021669)	ENSLCAG00010021673
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00940000154697.b	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.a	ENSGT00390000000724.c.b.c	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.b	ENSGT00390000000781	ENSGT00940000162435	ENSGT00940000158862	ENSGT00940000155788.k	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.c.b	ENSGT00940000160311.a.a	ENSGT00940000158703	ENSGT00940000154697.a.a.a.a	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000158008	ENSGT00940000153446.a.a.w.a	ENSGT00940000154181.b.a	ENSGT00940000156357	ENSGT00940000159405	ENSGT00950000182995.e.b.ab	ENSGT00390000004263.a.d.a	ENSGT00390000003058.b.a.a.a.b
Climbing perch	MODERN SPECIES	7	mc5rb (ENSATEG00000024886)	fam210ab (ENSATEG00000024885)	ldlrad4b (ENSATEG00000024880)	CEP192 (ENSATEG00000024873)	SEH1L (ENSATEG00000024870)	ptpn2a (ENSATEG00000024866)	cep76 (ENSATEG00000024863)	id4 (ENSATEG00000024861)	ncalda (ENSATEG00000024860)	ENSATEG00000024857	ZNF706 (ENSATEG00000024855)	ENSATEG00000026792	ENSATEG00000024852	ENSATEG00000024849	ENSATEG00000024848	FBXO43 (ENSATEG00000028162) ##22	ENSATEG00000024842	VPS13B (ENSATEG00000024830)	OSR2 (ENSATEG00000024821)	KCNS2 (ENSATEG00000024818)	NIPAL2 (ENSATEG00000024816)	POP1 (ENSATEG00000024814)	RIDA (ENSATEG00000026544)	MATN2 (ENSATEG00000024806)	LAPTM4B (ENSATEG00000024803)	ENSATEG00000024800	ubr5 (ENSATEG00000024796)	ENSATEG00000024793	AZIN1 (ENSATEG00000027011)	atp6v1c1a (ENSATEG00000024785)	ENSATEG00000024783
Siamese fighting fish	MODERN SPECIES	7	mc5rb (ENSBSLG00000004521)	fam210ab (ENSBSLG00000004519)	ldlrad4b (ENSBSLG00000004516)	ENSBSLG00000004514	ptpn2a (ENSBSLG00000004511)	cep76 (ENSBSLG00000004504)	id4 (ENSBSLG00000004501)	ENSBSLG00000004499	ncalda (ENSBSLG00000004497)	ENSBSLG00000004496	ZNF706 (ENSBSLG00000004490)	ENSBSLG00000004489	pabpc1a (ENSBSLG00000004365)	rnf19a (ENSBSLG00000004287)	ENSBSLG00000004276	FBXO43 (ENSBSLG00000004274) ##22	ENSBSLG00000004262	ENSBSLG00000004259	VPS13B (ENSBSLG00000004223)	osr2 (ENSBSLG00000004216)	KCNS2 (ENSBSLG00000024975)	NIPAL2 (ENSBSLG00000024962)	POP1 (ENSBSLG00000024944)	rida (ENSBSLG00000024938)	MATN2 (ENSBSLG00000024860)	LAPTM4B (ENSBSLG00000024837)	ENSBSLG00000024827	ubr5 (ENSBSLG00000024663)	ENSBSLG00000024648	azin1a (ENSBSLG00000024637)	fbl (ENSBSLG00000024634)
Zig-zag eel	MODERN SPECIES	7	fam210ab (ENSMAMG00000028202)	ldlrad4b (ENSMAMG00000004835)	CEP192 (ENSMAMG00000026160)	SEH1L (ENSMAMG00000004727)	ptpn2a (ENSMAMG00000004707)	cep76 (ENSMAMG00000004649)	id4 (ENSMAMG00000025429)	ncalda (ENSMAMG00000004627)	ENSMAMG00000004611	ZNF706 (ENSMAMG00000004595)	ENSMAMG00000004573	ENSMAMG00000004502	ENSMAMG00000004450	ENSMAMG00000004428	ENSMAMG00000028132	FBXO43 (ENSMAMG00000004388) ##22	RGS22 (ENSMAMG00000004365)	VPS13B (ENSMAMG00000004113)	OSR2 (ENSMAMG00000004078)	KCNS2 (ENSMAMG00000004066)	NIPAL2 (ENSMAMG00000028191)	POP1 (ENSMAMG00000004040)	RIDA (ENSMAMG00000025913)	MATN2 (ENSMAMG00000003989)	LAPTM4B (ENSMAMG00000003959)	ENSMAMG00000003934	ubr5 (ENSMAMG00000003764)	ENSMAMG00000003737	AZIN1 (ENSMAMG00000003682)	atp6v1c1a (ENSMAMG00000003662)	ENSMAMG00000003616
Pinecone sodierfish	MODERN SPECIES	7	mc5rb (ENSMMDG00005019607)	fam210ab (ENSMMDG00005019620)	ldlrad4b (ENSMMDG00005019622)	CEP192 (ENSMMDG00005019625)	seh1l (ENSMMDG00005019627)	ptpn2a (ENSMMDG00005019628)	cep76 (ENSMMDG00005019632)	id4 (ENSMMDG00005019647)	ncalda (ENSMMDG00005019649)	ENSMMDG00005019656	ZNF706 (ENSMMDG00005019659)	ywhabl (ENSMMDG00005019660)	pabpc1a (ENSMMDG00005019665)	RNF19A (ENSMMDG00005019727)	ENSMMDG00005019729	FBXO43 (ENSMMDG00005019742) ##22	ENSMMDG00005019744	VPS13B (ENSMMDG00005019751)	osr2 (ENSMMDG00005019759)	KCNS2 (ENSMMDG00005019762)	NIPAL2 (ENSMMDG00005019765)	POP1 (ENSMMDG00005019767)	rida (ENSMMDG00005019771)	MATN2 (ENSMMDG00005019776)	LAPTM4B (ENSMMDG00005019780)	ENSMMDG00005019783	ubr5 (ENSMMDG00005019800)	KLF10 (ENSMMDG00005019829)	azin1a (ENSMMDG00005019831)	atp6v1c1a (ENSMMDG00005019843)	ENSMMDG00005019885
Cod	MODERN SPECIES	2	ldlrad4b (ENSGMOG00000027185)	ENSGMOG00000023843	ENSGMOG00000013565	ENSGMOG00000034566	ENSGMOG00000032926	SEH1L (ENSGMOG00000013550)	ptpn2a (ENSGMOG00000013532)	cep76 (ENSGMOG00000013513)	id4 (ENSGMOG00000022166)	ncalda (ENSGMOG00000027021)	ENSGMOG00000013469	ENSGMOG00000013462	ENSGMOG00000013448	ENSGMOG00000013437	ENSGMOG00000013417	FBXO43 (ENSGMOG00000026792) ##22	RGS22 (ENSGMOG00000013353)	VPS13B (ENSGMOG00000031884)	OSR2 (ENSGMOG00000016368)	KCNS2 (ENSGMOG00000019787)	NIPAL2 (ENSGMOG00000000696)	POP1 (ENSGMOG00000000659)	RIDA (ENSGMOG00000000589)	ENSGMOG00000028137	MATN2 (ENSGMOG00000010960)	LAPTM4B (ENSGMOG00000010950)	ENSGMOG00000018533	UBR5 (ENSGMOG00000018440)	ENSGMOG00000018418	ATP6V1C1 (ENSGMOG00000018397)	ENSGMOG00000018367
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00530000063692.a ##22	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000154697.a.a.a.a	ENSGT00940000158703	ENSGT00940000160311.a.a	ENSGT01090000260040.b.b.a.d	ENSGT00940000155788.k	ENSGT00940000158862	ENSGT00940000162435	ENSGT00390000000781
Salmoninae	ANCESTRAL SPECIES	2	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137	ENSGT00940000164859	ENSGT00950000182986.a.b.b.l.a.b	ENSGT00940000159198.g	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b	ENSGT00530000063692.a ##22	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000154697.a.a.a.a
Salmoninae_a	ANCESTRAL SPECIES	53	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a ##22	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a	ENSGT00940000154697.a.a.a.a	ENSGT00940000158703	ENSGT00940000160311.a.a.a.b	ENSGT00940000160311.a.a.a.a	ENSGT01090000260040.b.b.a.d	ENSGT00940000155788.k.a	ENSGT00940000158862.n	ENSGT00940000162435
Salmo	ANCESTRAL SPECIES	192		ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137	ENSGT00990000211233	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a ##22	ENSGT00500000044936.c.b
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	252						ENSSSAG00000094228	ENSSSAG00000105764	fbxo32 (ENSSSAG00000026564)	ENSSSAG00000091421	ENSSSAG00000089278	ENSSSAG00000112755	ENSSSAG00000104075	ENSSSAG00000085775	ENSSSAG00000120366	RL30 (ENSSSAG00000104893)	ENSSSAG00000035464 ##22	ENSSSAG00000090359
Atlantic salmon	MODERN SPECIES	251							ENSSSAG00000004294	fbxo32 (ENSSSAG00000086795)	ENSSSAG00000099588	ENSSSAG00000100880	elovl4a (ENSSSAG00000084450)	ENSSSAG00000009619	si:ch211-151o1.4 (ENSSSAG00000092952)	ENSSSAG00000106101	ENSSSAG00000014512	ENSSSAG00000103383 ##22	ENSSSAG00000059868
River trout	DUPLICATION
River trout	MODERN SPECIES	439	ENSSTUG00000025985	zgc:110410 (ENSSTUG00000025991)	ANKIB1 (ENSSTUG00000026039)	eomesb (ENSSTUG00000026559)	cmc1 (ENSSTUG00000026574)	azi2 (ENSSTUG00000026589)	ENSSTUG00000026599	ENSSTUG00000026605	fbxo32 (ENSSTUG00000026611)	ENSSTUG00000026674	elovl4a (ENSSTUG00000026696)	SOGA3 (ENSSTUG00000026706)	SOGA3 (ENSSTUG00000026731)	ENSSTUG00000026739	rpl30 (ENSSTUG00000026756)	fbxo43 (ENSSTUG00000026764) ##22	ENSSTUG00000026773	ENSSTUG00000026781	ENSSTUG00000026799	fbxo43 (ENSSTUG00000026804) ##22	rpl30 (ENSSTUG00000026826)	ENSSTUG00000026835	pabpc1a (ENSSTUG00000026847)	ENSSTUG00000027223	ENSSTUG00000027233	RNF19A (ENSSTUG00000027288)	ENSSTUG00000027345	ENSSTUG00000027349	ENSSTUG00000027357	rida (ENSSTUG00000027374)	POP1 (ENSSTUG00000027386)
River trout	MODERN SPECIES	439	rida (ENSSTUG00000027504)	POP1 (ENSSTUG00000027478)	NIPAL2 (ENSSTUG00000027469)	NIPAL2 (ENSSTUG00000027461)	POP1 (ENSSTUG00000027386)	rida (ENSSTUG00000027374)	ENSSTUG00000027357	ENSSTUG00000027349	ENSSTUG00000027345	RNF19A (ENSSTUG00000027288)	ENSSTUG00000027233	ENSSTUG00000027223	pabpc1a (ENSSTUG00000026847)	ENSSTUG00000026835	rpl30 (ENSSTUG00000026826)	fbxo43 (ENSSTUG00000026804) ##22	ENSSTUG00000026799	ENSSTUG00000026781	ENSSTUG00000026773	fbxo43 (ENSSTUG00000026764) ##22	rpl30 (ENSSTUG00000026756)	ENSSTUG00000026739	SOGA3 (ENSSTUG00000026731)	SOGA3 (ENSSTUG00000026706)	elovl4a (ENSSTUG00000026696)	ENSSTUG00000026674	fbxo32 (ENSSTUG00000026611)	ENSSTUG00000026605	ENSSTUG00000026599	azi2 (ENSSTUG00000026589)	cmc1 (ENSSTUG00000026574)
Oncorhynchus	ANCESTRAL SPECIES	100	ENSGT00940000154655.a.i.a	ENSGT00940000155321.e.k	ENSGT00940000155321.d.a	ENSGT00390000011137	ENSGT00940000164859	ENSGT00940000159198.g.l	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.C.c.a.g	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a ##22	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a.e.a	ENSGT00940000154697.a.a.a.a	ENSGT00940000162435	ENSGT00390000000781.g	ENSGT00940000154686.b.e.a	ENSGT00390000000724.c.b.c	ENSGT00940000156554.a	ENSGT01030000234510.a.a.b	ENSGT00950000183199.b.n
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000059968	ENSOMYG00000047907	ENSOMYG00000023106	ENSOMYG00000054998	ENSOMYG00000074908	ENSOMYG00000052788	ENSOMYG00000027996	ENSOMYG00000060832	ENSOMYG00000074461	ENSOMYG00000063820	elovl4a (ENSOMYG00000024737)	ENSOMYG00000047968	si:ch211-151o1.4 (ENSOMYG00000052485)	ENSOMYG00000030225	RL30 (ENSOMYG00000025458)	FBXO43 (ENSOMYG00000057769) ##22	RGS22 (ENSOMYG00000067468)	VPS13B (ENSOMYG00000064938)	ENSOMYG00000073433	ENSOMYG00000024763	OSR2 (ENSOMYG00000050135)	ENSOMYG00000048893	KCNS2 (ENSOMYG00000051289)	NIPAL2 (ENSOMYG00000069985)	ENSOMYG00000049524	ENSOMYG00000059470	POP1 (ENSOMYG00000069502)	RIDA (ENSOMYG00000035169)	ENSOMYG00000068668	ENSOMYG00000066946	ENSOMYG00000054979
Oncorhynchus_a	ANCESTRAL SPECIES	142			ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.e.k	ENSGT00390000011137	ENSGT00940000164859	ENSGT00940000159198.g.l	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a ##22	ENSGT00500000044936.c.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478	ENSGT00420000029792.qb.a.e.a	ENSGT00940000154697.a.a.a.a	ENSGT00940000162435	ENSGT00390000000781.g	ENSGT00940000154686.b.e.a
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	1460													ENSOKIG00005032242	ENSOKIG00005032247	ENSOKIG00005032257	ENSOKIG00005032296 ##22	ENSOKIG00005032305
Coho salmon	MODERN SPECIES	31	ENSOKIG00005017110	ENSOKIG00005017136	EIF3H (ENSOKIG00005017148)	ENSOKIG00005017213	EXT1 (ENSOKIG00005017266)	washc5 (ENSOKIG00005017362)	nsmce2 (ENSOKIG00005017448)	LRATD2 (ENSOKIG00005017509)	KLHL38 (ENSOKIG00005017514)	FBXO32 (ENSOKIG00005017524)	PRELID3A (ENSOKIG00005017542)	ELOVL4 (ENSOKIG00005017648)	SOGA3 (ENSOKIG00005017670)	ENSOKIG00005017690	ENSOKIG00005017700	fbxo43 (ENSOKIG00005017727) ##22	ENSOKIG00005017737	ENSOKIG00005017765	ENSOKIG00005017774	OSR2 (ENSOKIG00005017820)	KCNS2 (ENSOKIG00005017842)	NIPAL2 (ENSOKIG00005017847)	RIDA (ENSOKIG00005017858)	POP1 (ENSOKIG00005017872)	ENSOKIG00005017899	RNF19A (ENSOKIG00005017957)	ENSOKIG00005017976	ENSOKIG00005017998	ENSOKIG00005018205	ENSOKIG00005018355	ncalda (ENSOKIG00005018360)
Chinook salmon	MODERN SPECIES	876													ENSOTSG00005018213	ECHDC1 (ENSOTSG00005018214)	ENSOTSG00005018215	ENSOTSG00005018216 ##22
Huchen	MODERN SPECIES	8210														ECHDC1 (ENSHHUG00000003801)	rpl30 (ENSHHUG00000003792)	ENSHHUG00000003786 ##22
Northern pike	MODERN SPECIES	15	ENSELUG00000032866	ENSELUG00000031654	eif3ha (ENSELUG00000003129)	rad21a (ENSELUG00000003181)	ext1a (ENSELUG00000003201)	washc5 (ENSELUG00000003237)	nsmce2 (ENSELUG00000003259)	LRATD2 (ENSELUG00000003267)	KLHL38 (ENSELUG00000003275)	fbxo32 (ENSELUG00000003297)	PRELID3A (ENSELUG00000003312)	elovl4a (ENSELUG00000003322)	SOGA3 (ENSELUG00000003336)	si:ch211-151o1.4 (ENSELUG00000001588)	ECHDC1 (ENSELUG00000003366)	fbxo43 (ENSELUG00000003389) ##22	ENSELUG00000003417	VPS13B (ENSELUG00000003468)	ENSELUG00000030603	ENSELUG00000027765	osr2 (ENSELUG00000003493)	ENSELUG00000033955	KCNS2 (ENSELUG00000003500)	NIPAL2 (ENSELUG00000003504)	POP1 (ENSELUG00000003526)	rida (ENSELUG00000003537)	ENSELUG00000003573	ENSELUG00000003588	pabpc1a (ENSELUG00000003614)	ENSELUG00000003632	grhl2a (ENSELUG00000003646)
Spotted gar	MODERN SPECIES	649	CEP192 (ENSLOCG00000009581)	seh1l (ENSLOCG00000009595)	ptpn2a (ENSLOCG00000009609)	psmg2 (ENSLOCG00000009625)	cep76 (ENSLOCG00000009631)	id4 (ENSLOCG00000009639)	ncalda (ENSLOCG00000009644)	grhl2b (ENSLOCG00000009655)	znf706 (ENSLOCG00000009661)	ywhaz (ENSLOCG00000009671)	PABPC3 (ENSLOCG00000009681)	SNX31 (ENSLOCG00000009692)	rnf19a (ENSLOCG00000009704)	spag1a (ENSLOCG00000009713)	polr2k (ENSLOCG00000009730)	FBXO43 (ENSLOCG00000009732) ##22	RGS22 (ENSLOCG00000009743)	VPS13B (ENSLOCG00000009760)	osr2 (ENSLOCG00000009790)	stk3 (ENSLOCG00000009795)	KCNS2 (ENSLOCG00000018341)	NIPAL2 (ENSLOCG00000009809)	POP1 (ENSLOCG00000009817)	rida (ENSLOCG00000009827)	rpl30 (ENSLOCG00000009836)	MATN2 (ENSLOCG00000009845)	laptm4b (ENSLOCG00000009853)	mtdha (ENSLOCG00000009864)	rrm2b (ENSLOCG00000009872)	ubr5 (ENSLOCG00000009882)	azin1b (ENSLOCG00000009927)
Reedfish	MODERN SPECIES	4	ENSECRG00000013634	ZDHHC11 (ENSECRG00000013586)	ENSECRG00000013577	brd9 (ENSECRG00000013541)	trip13 (ENSECRG00000013508)	NKD2 (ENSECRG00000013488)	edn1 (ENSECRG00000013477)	HIVEP1 (ENSECRG00000013456)	ADTRP (ENSECRG00000013320)	TMEM170B (ENSECRG00000013265)	nedd9 (ENSECRG00000013229)	smim13 (ENSECRG00000013208)	ZHX1 (ENSECRG00000013180)	ENSECRG00000013150	rida (ENSECRG00000013123)	FBXO43 (ENSECRG00000013102) ##22	ENSECRG00000013067	ENSECRG00000013041	osr2 (ENSECRG00000013009)	STK3 (ENSECRG00000012858)	KCNS2 (ENSECRG00000012811)	NIPAL2 (ENSECRG00000012791)	POP1 (ENSECRG00000012759)	POLR2K (ENSECRG00000012744)	azin1b (ENSECRG00000012722)	KLF10 (ENSECRG00000012708)	ubr5 (ENSECRG00000012450)	CDKAL1 (ENSECRG00000012402)	ENSECRG00000012391	sox4b (ENSECRG00000012380)	ENSECRG00000012353
Elephant shark	MODERN SPECIES	1533	mtfr1 (ENSCMIG00000019093)	pde7a (ENSCMIG00000000208)	ENSCMIG00000000301	ENSCMIG00000000329	crhb (ENSCMIG00000000350)	rrs1 (ENSCMIG00000000355)	adhfe1 (ENSCMIG00000000364)	ENSCMIG00000000390	MYBL1 (ENSCMIG00000000426)	VCPIP1 (ENSCMIG00000000495)	sgk3 (ENSCMIG00000000609)	ENSCMIG00000000900	ADGRB1 (ENSCMIG00000001012)	SPAG1 (ENSCMIG00000001331)	ENSCMIG00000001336	FBXO43 (ENSCMIG00000001345) ##22	ENSCMIG00000001347	ENSCMIG00000001351	snx16 (ENSCMIG00000001357)	ENSCMIG00000001362	zfand1 (ENSCMIG00000001370)	SLC10A5 (ENSCMIG00000001374)	IMPA1 (ENSCMIG00000001376)	ENSCMIG00000001391	ENSCMIG00000001408	ENSCMIG00000001450	PAG1 (ENSCMIG00000001468)	znf704 (ENSCMIG00000001480)	ENSCMIG00000001488	ENSCMIG00000001492	TPD52 (ENSCMIG00000001501)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063692.a ##22
Lamprey	MODERN SPECIES	1159															lypla1 (ENSPMAG00000008247)	ENSPMAG00000008259 ##22	ENSPMAG00000008265