Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Glires	ANCESTRAL SPECIES	5	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Rodentia	ANCESTRAL SPECIES	6	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Muroidea	ANCESTRAL SPECIES	22	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.r #15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.r #15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237.d #25	ENSGT00940000162166 #26	ENSGT00940000160886.p.a.b.a.a #27	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024.e #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.r #15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237.d #25	ENSGT00940000162166 #26	ENSGT00940000160886.p.a.b.a.a #27	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024.e #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Agpat4 (ENSCGRG00001024340)	Prkn (ENSCGRG00001011980)	ENSCGRG00001009195	Pacrg (ENSCGRG00001010865) #7	Qki (ENSCGRG00001012114) #8	Pabpc6 (ENSCGRG00001007983) #9	1700010I14Rik (ENSCGRG00001014965) #10	Pde10a (ENSCGRG00001016395) #11	ENSCGRG00001024700 #12	ENSCGRG00001024817 #14	ENSCGRG00001024881 ##15	ENSCGRG00001024749 #18	Rps6ka2 (ENSCGRG00001024721) #20	ENSCGRG00001024787	Gpr31b (ENSCGRG00001006182) #21	ENSCGRG00001000721 #22	Ttll2 (ENSCGRG00001024844) #23	ENSCGRG00001024904 #24	ENSCGRG00001007918 ##27	Afdn (ENSCGRG00001013153) #25	ENSCGRG00001010432 #26	ENSCGRG00001010553 #27	Dact2 (ENSCGRG00001007356) #28	Smoc2 (ENSCGRG00001000600) #29	Thbs2 (ENSCGRG00001023457) #30	Wdr27 (ENSCGRG00001024854) #31	Phf10 (ENSCGRG00001004025) #33	1600012H06Rik (ENSCGRG00001008745) #32	ENSCGRG00001024607 #34	ENSCGRG00001024849 #35	Dll1 (ENSCGRG00001014863) #36
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.r #15	ENSGT01030000234667.b #16	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237.d #25	ENSGT00940000162166 #26	ENSGT00940000160886.p.a.b.a.a #27	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024.e #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Northern American deer mouse	MODERN SPECIES	7	ENSPEMG00000028613	ENSPEMG00000025332	Pacrg (ENSPEMG00000008420) #7	Qki (ENSPEMG00000007765) #8	Pabpc6 (ENSPEMG00000028235) #9	1700010I14Rik (ENSPEMG00000009028) #10	Pde10a (ENSPEMG00000013375) #11	T (ENSPEMG00000015655) #12	ENSPEMG00000027563	Prr18 (ENSPEMG00000014412) #13	ENSPEMG00000017376 #14	ENSPEMG00000018400 ##15	ENSPEMG00000011035 #18	Rps6ka2 (ENSPEMG00000008858) #20	Gpr31b (ENSPEMG00000029005) #21	ENSPEMG00000006421 #22	Ttll2 (ENSPEMG00000012262) #23	ENSPEMG00000017052 #24	Afdn (ENSPEMG00000009605) #25	ENSPEMG00000025001 #26	ENSPEMG00000031076 #27	Dact2 (ENSPEMG00000006283) #28	Smoc2 (ENSPEMG00000018849) #29	Thbs2 (ENSPEMG00000006363) #30	Wdr27 (ENSPEMG00000016488) #31	1600012H06Rik (ENSPEMG00000024738) #32	Phf10 (ENSPEMG00000017299) #33	ENSPEMG00000013043 #34	ENSPEMG00000018453 #35	ENSPEMG00000024556 ##35	Dll1 (ENSPEMG00000003760) #36
Prairie vole	MODERN SPECIES	358	Map3k4 (ENSMOCG00000015705)	Agpat4 (ENSMOCG00000002544)	Prkn (ENSMOCG00000000910)	Pacrg (ENSMOCG00000018703) #7	Qki (ENSMOCG00000008370) #8	1700010I14Rik (ENSMOCG00000011216) #10	Pde10a (ENSMOCG00000016596) #11	T (ENSMOCG00000016940) #12	Prr18 (ENSMOCG00000014100) #13	ENSMOCG00000012383 #14	ENSMOCG00000003155 #15	Ccr6 (ENSMOCG00000022621) #16	ENSMOCG00000014231	ENSMOCG00000016647 #18	Rps6ka2 (ENSMOCG00000011166) #20	ENSMOCG00000019493 #22	ENSMOCG00000016335 #24	ENSMOCG00000011368	Afdn (ENSMOCG00000017063) #25	Dact2 (ENSMOCG00000011813) #28	Smoc2 (ENSMOCG00000007672) #29	Thbs2 (ENSMOCG00000020846) #30	Wdr27 (ENSMOCG00000001650) #31	1600012H06Rik (ENSMOCG00000002884) #32	Phf10 (ENSMOCG00000000325) #33	ENSMOCG00000017393 #34	ENSMOCG00000009758 #35	Dll1 (ENSMOCG00000001279) #36	Fam120b (ENSMOCG00000014257) #37	Psmb1 (ENSMOCG00000010751)	Tbp (ENSMOCG00000006234)
Murinae	ANCESTRAL SPECIES	29	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.q.b ##15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035	ENSGT00940000157474
Rat	MODERN SPECIES		Pacrg (ENSRNOG00000068261) #7	Qki (ENSRNOG00000048297) #8	Pabpc6 (ENSRNOG00000017367) #9	MGC94891 (ENSRNOG00000011243) #10	Pde10a (ENSRNOG00000011310) #11	Tbxt (ENSRNOG00000012229) #12	T2 (ENSRNOG00000024172)	ENSRNOG00000066810	Prr18 (ENSRNOG00000070586) #13	Sft2d1 (ENSRNOG00000024140) #14	Mpc1 (ENSRNOG00000012415) ##15	Ccr6 (ENSRNOG00000012964) #16	Cep43 (ENSRNOG00000055093) #17	Rnaset2 (ENSRNOG00000013190) #18	Rps6ka2 (ENSRNOG00000013194) #20	Tcp10b (ENSRNOG00000013374) #22	Ttll2 (ENSRNOG00000033901) #23	Unc93a (ENSRNOG00000047027) #24	RGD1560718 (ENSRNOG00000059551) ##27	LOC102546375 (ENSRNOG00000063775) ##27	Smok2a (ENSRNOG00000052093) ##27	LOC120100105 (ENSRNOG00000068967) ##27	AABR07001592.2 (ENSRNOG00000058564)	Afdn (ENSRNOG00000023753) #25	LOC102556715 (ENSRNOG00000065613) ##27	Vom2r7 (ENSRNOG00000033775)	ENSRNOG00000069666	Vom1r1 (ENSRNOG00000070889)	Vom2r8 (ENSRNOG00000065638)	Vom2r9 (ENSRNOG00000013671)	ENSRNOG00000069390
Mus	ANCESTRAL SPECIES	21	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988.q.b ##15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00970000194611	ENSGT00940000155237 #25	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Shrew mouse	DUPLICATION
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	13	Pde10a (MGP_PahariEiJ_G0023376) #11	MGP_PahariEiJ_G0023377	T (MGP_PahariEiJ_G0023378) #12	MGP_PahariEiJ_G0023379 #14	Prr18 (MGP_PahariEiJ_G0023380) #13	MGP_PahariEiJ_G0023381 #14	MGP_PahariEiJ_G0023382 ##15	Ccr6 (MGP_PahariEiJ_G0023383) #16	Cep43 (MGP_PahariEiJ_G0023384) #17	MGP_PahariEiJ_G0023385 #18	MGP_PahariEiJ_G0023386 #18	MGP_PahariEiJ_G0023387 #19	MGP_PahariEiJ_G0023388 #19	Rps6ka2 (MGP_PahariEiJ_G0023389) #20	Gpr31b (MGP_PahariEiJ_G0023390) #21	MGP_PahariEiJ_G0023391 #22	MGP_PahariEiJ_G0023392 #22	MGP_PahariEiJ_G0023393 #22	Ttll2 (MGP_PahariEiJ_G0023394) #23	MGP_PahariEiJ_G0023395 #24	MGP_PahariEiJ_G0023396 #24	MGP_PahariEiJ_G0023397	Afdn (MGP_PahariEiJ_G0023398) #25	Dact2 (MGP_PahariEiJ_G0023399) #28	Smoc2 (MGP_PahariEiJ_G0023400) #29	Thbs2 (MGP_PahariEiJ_G0023401) #30	Wdr27 (MGP_PahariEiJ_G0023402) #31	1600012H06Rik (MGP_PahariEiJ_G0023403) #32	Phf10 (MGP_PahariEiJ_G0023404) #33	MGP_PahariEiJ_G0023405 #34	MGP_PahariEiJ_G0023406 #34
Shrew mouse	MODERN SPECIES	13	T (MGP_PahariEiJ_G0023378) #12	MGP_PahariEiJ_G0023379 #14	Prr18 (MGP_PahariEiJ_G0023380) #13	MGP_PahariEiJ_G0023381 #14	MGP_PahariEiJ_G0023382 ##15	Ccr6 (MGP_PahariEiJ_G0023383) #16	Cep43 (MGP_PahariEiJ_G0023384) #17	MGP_PahariEiJ_G0023385 #18	MGP_PahariEiJ_G0023386 #18	MGP_PahariEiJ_G0023387 #19	MGP_PahariEiJ_G0023388 #19	Rps6ka2 (MGP_PahariEiJ_G0023389) #20	Gpr31b (MGP_PahariEiJ_G0023390) #21	MGP_PahariEiJ_G0023391 #22	MGP_PahariEiJ_G0023392 #22	MGP_PahariEiJ_G0023393 #22	Ttll2 (MGP_PahariEiJ_G0023394) #23	MGP_PahariEiJ_G0023395 #24	MGP_PahariEiJ_G0023396 #24	MGP_PahariEiJ_G0023397	Afdn (MGP_PahariEiJ_G0023398) #25	Dact2 (MGP_PahariEiJ_G0023399) #28	Smoc2 (MGP_PahariEiJ_G0023400) #29	Thbs2 (MGP_PahariEiJ_G0023401) #30	Wdr27 (MGP_PahariEiJ_G0023402) #31	1600012H06Rik (MGP_PahariEiJ_G0023403) #32	Phf10 (MGP_PahariEiJ_G0023404) #33	MGP_PahariEiJ_G0023405 #34	MGP_PahariEiJ_G0023406 #34	MGP_PahariEiJ_G0023407 #35	Dll1 (MGP_PahariEiJ_G0023408) #36
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023377	T (MGP_PahariEiJ_G0023378) #12	MGP_PahariEiJ_G0023379 #14	Prr18 (MGP_PahariEiJ_G0023380) #13	MGP_PahariEiJ_G0023381 #14	MGP_PahariEiJ_G0023382 ##15	Ccr6 (MGP_PahariEiJ_G0023383) #16	Cep43 (MGP_PahariEiJ_G0023384) #17	MGP_PahariEiJ_G0023385 #18	MGP_PahariEiJ_G0023386 #18	MGP_PahariEiJ_G0023387 #19	MGP_PahariEiJ_G0023388 #19	Rps6ka2 (MGP_PahariEiJ_G0023389) #20	Gpr31b (MGP_PahariEiJ_G0023390) #21	MGP_PahariEiJ_G0023391 #22	MGP_PahariEiJ_G0023392 #22	MGP_PahariEiJ_G0023393 #22	Ttll2 (MGP_PahariEiJ_G0023394) #23	MGP_PahariEiJ_G0023395 #24	MGP_PahariEiJ_G0023396 #24	MGP_PahariEiJ_G0023397	Afdn (MGP_PahariEiJ_G0023398) #25	Dact2 (MGP_PahariEiJ_G0023399) #28	Smoc2 (MGP_PahariEiJ_G0023400) #29	Thbs2 (MGP_PahariEiJ_G0023401) #30	Wdr27 (MGP_PahariEiJ_G0023402) #31	1600012H06Rik (MGP_PahariEiJ_G0023403) #32	Phf10 (MGP_PahariEiJ_G0023404) #33	MGP_PahariEiJ_G0023405 #34	MGP_PahariEiJ_G0023406 #34	MGP_PahariEiJ_G0023407 #35
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000155310.b #8	ENSGT00940000153773.a.a.b.e.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a.j #14	ENSGT00510000046988.q.b ##15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000160886.p.a.b.b.b ##27	ENSGT00970000194611	ENSGT00940000155237 #25	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Ryukyu mouse	DUPLICATION
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	8	1700010I14Rik (MGP_CAROLIEiJ_G0021059) #10	Pde10a (MGP_CAROLIEiJ_G0021060) #11	T (MGP_CAROLIEiJ_G0021061) #12	Sft2d1 (MGP_CAROLIEiJ_G0021062) #14	Prr18 (MGP_CAROLIEiJ_G0021063) #13	MGP_CAROLIEiJ_G0021064 #14	MGP_CAROLIEiJ_G0021065 ##15	Ccr6 (MGP_CAROLIEiJ_G0021066) #16	Cep43 (MGP_CAROLIEiJ_G0021067) #17	MGP_CAROLIEiJ_G0021068 #18	MGP_CAROLIEiJ_G0021069 #18	Rps6ka2 (MGP_CAROLIEiJ_G0021070) #20	Gpr31b (MGP_CAROLIEiJ_G0021071) #21	MGP_CAROLIEiJ_G0021072 #22	MGP_CAROLIEiJ_G0021073 #22	MGP_CAROLIEiJ_G0021074 #22	Ttll2 (MGP_CAROLIEiJ_G0021075) #23	MGP_CAROLIEiJ_G0021076 #24	MGP_CAROLIEiJ_G0021077 #24	MGP_CAROLIEiJ_G0021078	MGP_CAROLIEiJ_G0021079 ##27	MGP_CAROLIEiJ_G0021080 ##27	MGP_CAROLIEiJ_G0021081 ##27	MGP_CAROLIEiJ_G0021082 ##27	Afdn (MGP_CAROLIEiJ_G0021083) #25	Dact2 (MGP_CAROLIEiJ_G0021084) #28	Smoc2 (MGP_CAROLIEiJ_G0021085) #29	Thbs2 (MGP_CAROLIEiJ_G0021086) #30	Wdr27 (MGP_CAROLIEiJ_G0021087) #31	1600012H06Rik (MGP_CAROLIEiJ_G0021088) #32	Phf10 (MGP_CAROLIEiJ_G0021089) #33
Ryukyu mouse	MODERN SPECIES	8	Qki (MGP_CAROLIEiJ_G0021057) #8	Pabpc6 (MGP_CAROLIEiJ_G0021058) #9	1700010I14Rik (MGP_CAROLIEiJ_G0021059) #10	Pde10a (MGP_CAROLIEiJ_G0021060) #11	T (MGP_CAROLIEiJ_G0021061) #12	Sft2d1 (MGP_CAROLIEiJ_G0021062) #14	Prr18 (MGP_CAROLIEiJ_G0021063) #13	MGP_CAROLIEiJ_G0021064 #14	MGP_CAROLIEiJ_G0021065 ##15	Ccr6 (MGP_CAROLIEiJ_G0021066) #16	Cep43 (MGP_CAROLIEiJ_G0021067) #17	MGP_CAROLIEiJ_G0021068 #18	MGP_CAROLIEiJ_G0021069 #18	Rps6ka2 (MGP_CAROLIEiJ_G0021070) #20	Gpr31b (MGP_CAROLIEiJ_G0021071) #21	MGP_CAROLIEiJ_G0021072 #22	MGP_CAROLIEiJ_G0021073 #22	MGP_CAROLIEiJ_G0021074 #22	Ttll2 (MGP_CAROLIEiJ_G0021075) #23	MGP_CAROLIEiJ_G0021076 #24	MGP_CAROLIEiJ_G0021077 #24	MGP_CAROLIEiJ_G0021078	MGP_CAROLIEiJ_G0021079 ##27	MGP_CAROLIEiJ_G0021080 ##27	MGP_CAROLIEiJ_G0021081 ##27	MGP_CAROLIEiJ_G0021082 ##27	Afdn (MGP_CAROLIEiJ_G0021083) #25	Dact2 (MGP_CAROLIEiJ_G0021084) #28	Smoc2 (MGP_CAROLIEiJ_G0021085) #29	Thbs2 (MGP_CAROLIEiJ_G0021086) #30	Wdr27 (MGP_CAROLIEiJ_G0021087) #31
Ryukyu mouse	MODERN SPECIES	8	Pabpc6 (MGP_CAROLIEiJ_G0021058) #9	1700010I14Rik (MGP_CAROLIEiJ_G0021059) #10	Pde10a (MGP_CAROLIEiJ_G0021060) #11	T (MGP_CAROLIEiJ_G0021061) #12	Sft2d1 (MGP_CAROLIEiJ_G0021062) #14	Prr18 (MGP_CAROLIEiJ_G0021063) #13	MGP_CAROLIEiJ_G0021064 #14	MGP_CAROLIEiJ_G0021065 ##15	Ccr6 (MGP_CAROLIEiJ_G0021066) #16	Cep43 (MGP_CAROLIEiJ_G0021067) #17	MGP_CAROLIEiJ_G0021068 #18	MGP_CAROLIEiJ_G0021069 #18	Rps6ka2 (MGP_CAROLIEiJ_G0021070) #20	Gpr31b (MGP_CAROLIEiJ_G0021071) #21	MGP_CAROLIEiJ_G0021072 #22	MGP_CAROLIEiJ_G0021073 #22	MGP_CAROLIEiJ_G0021074 #22	Ttll2 (MGP_CAROLIEiJ_G0021075) #23	MGP_CAROLIEiJ_G0021076 #24	MGP_CAROLIEiJ_G0021077 #24	MGP_CAROLIEiJ_G0021078	MGP_CAROLIEiJ_G0021079 ##27	MGP_CAROLIEiJ_G0021080 ##27	MGP_CAROLIEiJ_G0021081 ##27	MGP_CAROLIEiJ_G0021082 ##27	Afdn (MGP_CAROLIEiJ_G0021083) #25	Dact2 (MGP_CAROLIEiJ_G0021084) #28	Smoc2 (MGP_CAROLIEiJ_G0021085) #29	Thbs2 (MGP_CAROLIEiJ_G0021086) #30	Wdr27 (MGP_CAROLIEiJ_G0021087) #31	1600012H06Rik (MGP_CAROLIEiJ_G0021088) #32
Mus_B	ANCESTRAL SPECIES	9	ENSGT00700000105447.b.a	ENSGT00940000154721.db.a	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000002164 #13	ENSGT00390000018525.a.a.j #14	ENSGT00510000046988.q.b.b.a ##15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000160886.p.a.b.b.b.e.b ##27	ENSGT00940000160886.p.a.b.b.b.f ##27	ENSGT00970000194611	ENSGT00940000155237 #25	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36
Mouse	DUPLICATION
Mouse	DUPLICATION
Mouse	MODERN SPECIES	8	Plg (ENSMUSG00000059481)	Slc22a3 (ENSMUSG00000023828)	Slc22a2 (ENSMUSG00000040966)	Slc22a1 (ENSMUSG00000023829)	Igf2r (ENSMUSG00000023830)	Mas1 (ENSMUSG00000068037)	Mrgprh (ENSMUSG00000059408)	Pnldc1 (ENSMUSG00000073460)	Mrpl18 (ENSMUSG00000057388)	Tcp1 (ENSMUSG00000068039)	Acat3 (ENSMUSG00000062480)	Acat2 (ENSMUSG00000023832)	Wtap (ENSMUSG00000060475)	Sod2 (ENSMUSG00000006818)	Gpr31b (ENSMUSG00000071311) #21	Tcp10b (ENSMUSG00000055602) #22	Unc93a (ENSMUSG00000067049) #24	Smok2a (ENSMUSG00000073458) ##27	Smok2b (ENSMUSG00000073457) ##27	Tcp10c (ENSMUSG00000052469) #22	Afdn (ENSMUSG00000068036) #25	Gm7168 (ENSMUSG00000067941) ##27	Gm7356 (ENSMUSG00000101307) ##27	Gm7358 (ENSMUSG00000101361) ##27	Dact2 (ENSMUSG00000048826) #28	Smoc2 (ENSMUSG00000023886) #29	Thbs2 (ENSMUSG00000023885) #30	Wdr27 (ENSMUSG00000046991) #31	1600012H06Rik (ENSMUSG00000050088) #32	Phf10 (ENSMUSG00000023883) #33	Dynlt2a3 (ENSMUSG00000116780) #34
Mouse	MODERN SPECIES	8	Igf2r (ENSMUSG00000023830)	Mas1 (ENSMUSG00000068037)	Mrgprh (ENSMUSG00000059408)	Pnldc1 (ENSMUSG00000073460)	Mrpl18 (ENSMUSG00000057388)	Tcp1 (ENSMUSG00000068039)	Acat3 (ENSMUSG00000062480)	Acat2 (ENSMUSG00000023832)	Wtap (ENSMUSG00000060475)	Sod2 (ENSMUSG00000006818)	Gpr31b (ENSMUSG00000071311) #21	Tcp10b (ENSMUSG00000055602) #22	Unc93a (ENSMUSG00000067049) #24	Smok2a (ENSMUSG00000073458) ##27	Smok2b (ENSMUSG00000073457) ##27	Tcp10c (ENSMUSG00000052469) #22	Afdn (ENSMUSG00000068036) #25	Gm7168 (ENSMUSG00000067941) ##27	Gm7356 (ENSMUSG00000101307) ##27	Gm7358 (ENSMUSG00000101361) ##27	Dact2 (ENSMUSG00000048826) #28	Smoc2 (ENSMUSG00000023886) #29	Thbs2 (ENSMUSG00000023885) #30	Wdr27 (ENSMUSG00000046991) #31	1600012H06Rik (ENSMUSG00000050088) #32	Phf10 (ENSMUSG00000023883) #33	Dynlt2a3 (ENSMUSG00000116780) #34	9030025P20Rik (ENSMUSG00000116953) #35	Dynlt2a2 (ENSMUSG00000079710) #34	Gm3435 (ENSMUSG00000116895) #35	Dynlt2a1 (ENSMUSG00000079707) #34
Mouse	MODERN SPECIES	8	Serac1 (ENSMUSG00000015659)	Gtf2h5 (ENSMUSG00000034345)	Tulp4 (ENSMUSG00000034377)	Tmem181a (ENSMUSG00000038141)	Dynlt1a (ENSMUSG00000092074)	Dynlt1b (ENSMUSG00000096255)	Dynlt1c (ENSMUSG00000000579)	Dynlt1f (ENSMUSG00000095677)	Sytl3 (ENSMUSG00000041831)	Ezr (ENSMUSG00000052397)	Rsph3b (ENSMUSG00000023806)	Tagap1 (ENSMUSG00000052031)	Rnaset2b (ENSMUSG00000094724) #18	Gm1604b (ENSMUSG00000094083) #19	Rps6ka2 (ENSMUSG00000023809) #20	Tcp10a (ENSMUSG00000071322) #22	Ttll2 (ENSMUSG00000079722) #23	Gm49630 (ENSMUSG00000116672)	Unc93a2 (ENSMUSG00000056133) #24	Fndc1 (ENSMUSG00000071984)	Tagap (ENSMUSG00000033450)	Rsph3a (ENSMUSG00000073471)	Rnaset2a (ENSMUSG00000095687) #18	Cep43 (ENSMUSG00000069135) #17	Ccr6 (ENSMUSG00000040899) #16	Mpc1 (ENSMUSG00000023861) ##15	Sft2d1 (ENSMUSG00000073468) #14	Prr18 (ENSMUSG00000055945) #13	T2 (ENSMUSG00000058159)	T (ENSMUSG00000062327) #12	Pde10a (ENSMUSG00000023868) #11
Mus_C	ANCESTRAL SPECIES	34				ENSGT00960000191666	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a.j #14	ENSGT00510000046988.q.b.b.a ##15	ENSGT00510000046988.q.b.a ##15	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063558.B	ENSGT00940000157993.j	ENSGT00940000157993.i	ENSGT00390000004172	ENSGT01090000260082.d.b	ENSGT00940000160610	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913	ENSGT00390000004028	ENSGT00390000003560	ENSGT00940000160715	ENSGT00940000156557	ENSGT00940000156483
spretus	DUPLICATION
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0021960	MGP_SPRETEiJ_G0021959	T (MGP_SPRETEiJ_G0021958) #12	Prr18 (MGP_SPRETEiJ_G0021957) #13	MGP_SPRETEiJ_G0021956 #14	Sft2d1 (MGP_SPRETEiJ_G0021955) #14	MGP_SPRETEiJ_G0021954 ##15	Ccr6 (MGP_SPRETEiJ_G0021953) #16	Cep43 (MGP_SPRETEiJ_G0021952) #17	MGP_SPRETEiJ_G0021951 #18	MGP_SPRETEiJ_G0021950 #18	MGP_SPRETEiJ_G0021949 #19	MGP_SPRETEiJ_G0021948 #19	Rps6ka2 (MGP_SPRETEiJ_G0021947) #20	Gpr31b (MGP_SPRETEiJ_G0021946) #21	MGP_SPRETEiJ_G0021945 #22	MGP_SPRETEiJ_G0021944 #22	Ttll2 (MGP_SPRETEiJ_G0021943) #23	Fndc1 (MGP_SPRETEiJ_G0021942)	Tagap (MGP_SPRETEiJ_G0021941)	Tagap1 (MGP_SPRETEiJ_G0021940)	MGP_SPRETEiJ_G0021939	MGP_SPRETEiJ_G0021938	Ezr (MGP_SPRETEiJ_G0021937)	MGP_SPRETEiJ_G0021936	Tmem181a (MGP_SPRETEiJ_G0021935)	Tulp4 (MGP_SPRETEiJ_G0021934)	Gtf2h5 (MGP_SPRETEiJ_G0021933)	Serac1 (MGP_SPRETEiJ_G0021932)	Synj2 (MGP_SPRETEiJ_G0021931)	Snx9 (MGP_SPRETEiJ_G0021930)
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0021959	T (MGP_SPRETEiJ_G0021958) #12	Prr18 (MGP_SPRETEiJ_G0021957) #13	MGP_SPRETEiJ_G0021956 #14	Sft2d1 (MGP_SPRETEiJ_G0021955) #14	MGP_SPRETEiJ_G0021954 ##15	Ccr6 (MGP_SPRETEiJ_G0021953) #16	Cep43 (MGP_SPRETEiJ_G0021952) #17	MGP_SPRETEiJ_G0021951 #18	MGP_SPRETEiJ_G0021950 #18	MGP_SPRETEiJ_G0021949 #19	MGP_SPRETEiJ_G0021948 #19	Rps6ka2 (MGP_SPRETEiJ_G0021947) #20	Gpr31b (MGP_SPRETEiJ_G0021946) #21	MGP_SPRETEiJ_G0021945 #22	MGP_SPRETEiJ_G0021944 #22	Ttll2 (MGP_SPRETEiJ_G0021943) #23	Fndc1 (MGP_SPRETEiJ_G0021942)	Tagap (MGP_SPRETEiJ_G0021941)	Tagap1 (MGP_SPRETEiJ_G0021940)	MGP_SPRETEiJ_G0021939	MGP_SPRETEiJ_G0021938	Ezr (MGP_SPRETEiJ_G0021937)	MGP_SPRETEiJ_G0021936	Tmem181a (MGP_SPRETEiJ_G0021935)	Tulp4 (MGP_SPRETEiJ_G0021934)	Gtf2h5 (MGP_SPRETEiJ_G0021933)	Serac1 (MGP_SPRETEiJ_G0021932)	Synj2 (MGP_SPRETEiJ_G0021931)	Snx9 (MGP_SPRETEiJ_G0021930)	Zdhhc14 (MGP_SPRETEiJ_G0021929)
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	136																ENSMSIG00000004882 #22	ENSMSIG00000004874 #22	Ttll2 (ENSMSIG00000004867) #23
Steppe mouse	MODERN SPECIES	136															ENSMSIG00000004882 #22	ENSMSIG00000004874 #22	Ttll2 (ENSMSIG00000004867) #23
Steppe mouse	MODERN SPECIES	1154																ENSMSIG00000005793 #22
Upper Galilee mountains blind mole rat	MODERN SPECIES	906							Pde10a (ENSNGAG00000006185) #11	ENSNGAG00000016587 #12	ENSNGAG00000013272 #14	ENSNGAG00000003126 #15	Rps6ka2 (ENSNGAG00000017074) #20	ENSNGAG00000015365	ENSNGAG00000014822 #18	Cep43 (ENSNGAG00000013354) #17	Ccr6 (ENSNGAG00000020176) #16	ENSNGAG00000007143 #22	Ttll2 (ENSNGAG00000012987) #23	ENSNGAG00000012008 #24
Lesser Egyptian jerboa	MODERN SPECIES	44	Tbp (ENSJJAG00000005220)	Psmb1 (ENSJJAG00000019394)	ENSJJAG00000009475	ENSJJAG00000009562	Fam120b (ENSJJAG00000017465) #37	Dll1 (ENSJJAG00000008249) #36	ENSJJAG00000018062 #35	ENSJJAG00000020281 #34	Phf10 (ENSJJAG00000010002) #33	1600012H06Rik (ENSJJAG00000009779) #32	Wdr27 (ENSJJAG00000018913) #31	Thbs2 (ENSJJAG00000005730) #30	ENSJJAG00000022960	Smoc2 (ENSJJAG00000009559) #29	Dact2 (ENSJJAG00000006451) #28	ENSJJAG00000015043 #22	ENSJJAG00000011658 #24	Afdn (ENSJJAG00000011148) #25	ENSJJAG00000020398	Cep43 (ENSJJAG00000024342) #17	ENSJJAG00000013485 #18	Rps6ka2 (ENSJJAG00000005765) #20	ENSJJAG00000020707 #15	ENSJJAG00000023581 #14	ENSJJAG00000022568 #12	Pde10a (ENSJJAG00000010428) #11	ENSJJAG00000005686 #10	ENSJJAG00000010987	ENSJJAG00000017023	Pabpc6 (ENSJJAG00000019230) #9	Qki (ENSJJAG00000022765) #8
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Marmotini	ANCESTRAL SPECIES	11	ENSGT00390000015545.v	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063359.A #24	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035.r
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00390000015545.v	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063359.A #24	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35
Arctic ground squirrel	MODERN SPECIES	683											MPC1 (ENSUPAG00010000652) #15	RPS6KA2 (ENSUPAG00010000574) #20	RNASET2 (ENSUPAG00010000562) #18	CEP43 (ENSUPAG00010000510) #17	CCR6 (ENSUPAG00010000493) #16	ENSUPAG00010000480 #22
Squirrel	MODERN SPECIES	89	AGPAT4 (ENSSTOG00000002544)	PRKN (ENSSTOG00000021965)	ENSSTOG00000034364	PACRG (ENSSTOG00000010375) #7	QKI (ENSSTOG00000009113) #8	C6orf118 (ENSSTOG00000020468) #10	PDE10A (ENSSTOG00000001947) #11	TBXT (ENSSTOG00000028238) #12	SFT2D1 (ENSSTOG00000031211) #14	MPC1 (ENSSTOG00000024720) #15	RPS6KA2 (ENSSTOG00000005318) #20	RNASET2 (ENSSTOG00000010853) #18	CEP43 (ENSSTOG00000028679) #17	CCR6 (ENSSTOG00000022381) #16	GPR31 (ENSSTOG00000002401) #21	ENSSTOG00000025800 #22	ENSSTOG00000002281 #24	FRMD1 (ENSSTOG00000019365)	KIF25 (ENSSTOG00000027308) #26	AFDN (ENSSTOG00000014943) #25	DACT2 (ENSSTOG00000028857) #28	SMOC2 (ENSSTOG00000011824) #29	THBS2 (ENSSTOG00000028868) #30	WDR27 (ENSSTOG00000021993) #31	C6orf120 (ENSSTOG00000021666) #32	PHF10 (ENSSTOG00000022892) #33	DYNLT2 (ENSSTOG00000011284) #34	ERMARD (ENSSTOG00000011287) #35
Alpin marmot	MODERN SPECIES	55	MAP3K4 (ENSMMMG00000009318)	AGPAT4 (ENSMMMG00000009306)	ENSMMMG00000009285	PRKN (ENSMMMG00000009240)	PACRG (ENSMMMG00000009213) #7	QKI (ENSMMMG00000009192) #8	ENSMMMG00000009166 #10	PDE10A (ENSMMMG00000009083) #11	TBXT (ENSMMMG00000009058) #12	ENSMMMG00000009041	MPC1 (ENSMMMG00000009012) #15	RPS6KA2 (ENSMMMG00000008982) #20	RNASET2 (ENSMMMG00000008966) #18	ENSMMMG00000008953 #17	CCR6 (ENSMMMG00000008925) #16	ENSMMMG00000008905 #22	FRMD1 (ENSMMMG00000008833)	KIF25 (ENSMMMG00000008818) #26	AFDN (ENSMMMG00000008187) #25	UNC93A (ENSMMMG00000008150) #24	DACT2 (ENSMMMG00000008118) #28	SMOC2 (ENSMMMG00000008070) #29	ENSMMMG00000008062	THBS2 (ENSMMMG00000008020) #30	WDR27 (ENSMMMG00000007956) #31	C6orf120 (ENSMMMG00000007952) #32	PHF10 (ENSMMMG00000007949) #33	ERMARD (ENSMMMG00000007893) #35	DLL1 (ENSMMMG00000007861) #36	FAM120B (ENSMMMG00000007838) #37	ENSMMMG00000007812
Eurasian red squirrel	MODERN SPECIES	16	QKI (ENSSVLG00005011023) #8	C6orf118 (ENSSVLG00005010851) #10	PDE10A (ENSSVLG00005010372) #11	ENSSVLG00005010236	TBXT (ENSSVLG00005010149) #12	PRR18 (ENSSVLG00005010120) #13	SFT2D1 (ENSSVLG00005010090) #14	MPC1 (ENSSVLG00005009984) #15	ENSSVLG00005009943	ENSSVLG00005009919	ENSSVLG00005009894	RPS6KA2 (ENSSVLG00005009658) #20	RNASET2 (ENSSVLG00005009530) #18	CEP43 (ENSSVLG00005009283) #17	CCR6 (ENSSVLG00005009206) #16	ENSSVLG00005009071 #22	TTLL2 (ENSSVLG00005009051) #23	UNC93A (ENSSVLG00005008938) #24	ENSSVLG00005008872	AFDN (ENSSVLG00005008595) #25	KIF25 (ENSSVLG00005008516) #26	DACT2 (ENSSVLG00005008476) #28	SMOC2 (ENSSVLG00005008335) #29	THBS2 (ENSSVLG00005008075) #30	ENSSVLG00005010185	WDR27 (ENSSVLG00005010073) #31	ENSSVLG00005010029 #32	PHF10 (ENSSVLG00005009963) #33	ENSSVLG00005009866 #35	DYNLT2 (ENSSVLG00005009825) #34	ENSSVLG00005009783
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT00880000138034	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00390000014904	ENSGT00950000182906.b.a	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00880000138034	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00390000014904	ENSGT00950000182906.b.a	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00940000155208	ENSGT00880000138034	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00390000014904	ENSGT00950000182906.b.a	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388	ENSGT00940000156283	ENSGT00390000008373	ENSGT00940000156638	ENSGT00940000157684	ENSGT00390000004803	ENSGT00950000183032.B.b.b
Long-tailed chinchilla	MODERN SPECIES	146	ENSCLAG00000002399	MAP3K4 (ENSCLAG00000008769)	AGPAT4 (ENSCLAG00000008421)	PRKN (ENSCLAG00000008284)	PACRG (ENSCLAG00000008105) #7	ENSCLAG00000006238 #8	C6orf118 (ENSCLAG00000006108) #10	PDE10A (ENSCLAG00000004872) #11	TBXT (ENSCLAG00000002632) #12	SFT2D1 (ENSCLAG00000002586) #14	MPC1 (ENSCLAG00000002442) #15	RPS6KA2 (ENSCLAG00000002285) #20	RNASET2 (ENSCLAG00000005811) #18	CEP43 (ENSCLAG00000005200) #17	CCR6 (ENSCLAG00000005134) #16	ENSCLAG00000004820 #22	UNC93A (ENSCLAG00000004396) #24	AFDN (ENSCLAG00000003013) #25	ADGB (ENSCLAG00000004642)	STXBP5 (ENSCLAG00000004159)	SASH1 (ENSCLAG00000003367)	UST (ENSCLAG00000003051)	TAB2 (ENSCLAG00000002977)	ZC3H12D (ENSCLAG00000002831)	PPIL4 (ENSCLAG00000003991)	GINM1 (ENSCLAG00000003584)	KATNA1 (ENSCLAG00000003505)	LATS1 (ENSCLAG00000003449)	NUP43 (ENSCLAG00000003394)	PCMT1 (ENSCLAG00000003224)	ENSCLAG00000003173
Guinea pig	MODERN SPECIES	60	AGPAT4 (ENSCPOG00000006135)	PRKN (ENSCPOG00000006136)	PACRG (ENSCPOG00000013410) #7	QKI (ENSCPOG00000003424) #8	C6orf118 (ENSCPOG00000008774) #10	PDE10A (ENSCPOG00000008783) #11	TBXT (ENSCPOG00000001358) #12	ENSCPOG00000000167	SFT2D1 (ENSCPOG00000031625) #14	MPC1 (ENSCPOG00000005208) #15	RPS6KA2 (ENSCPOG00000005210) #20	RNASET2 (ENSCPOG00000007899) #18	CEP43 (ENSCPOG00000036620) #17	CCR6 (ENSCPOG00000034828) #16	GPR31 (ENSCPOG00000001786) #21	ENSCPOG00000009004 #22	UNC93A (ENSCPOG00000031556) #24	AFDN (ENSCPOG00000008268) #25	ENSCPOG00000002358 #26	ENSCPOG00000002354	STXBP5 (ENSCPOG00000013005)	SAMD5 (ENSCPOG00000036984)	SASH1 (ENSCPOG00000001861)	UST (ENSCPOG00000004092)	TAB2 (ENSCPOG00000015012)	ZC3H12D (ENSCPOG00000014608)	PPIL4 (ENSCPOG00000032871)	GINM1 (ENSCPOG00000008152)	KATNA1 (ENSCPOG00000020826)	LATS1 (ENSCPOG00000003577)	ENSCPOG00000010815
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a #22
Rabbit	MODERN SPECIES	265																ENSOCUG00000031043 #22
Primates	ANCESTRAL SPECIES	5	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Bushbaby	MODERN SPECIES	171	MAP3K4 (ENSOGAG00000004556)	AGPAT4 (ENSOGAG00000004567)	PRKN (ENSOGAG00000010979)	PACRG (ENSOGAG00000004947) #7	QKI (ENSOGAG00000003634) #8	C6orf118 (ENSOGAG00000007625) #10	PDE10A (ENSOGAG00000007629) #11	TBXT (ENSOGAG00000007863) #12	PRR18 (ENSOGAG00000030765) #13	SFT2D1 (ENSOGAG00000006302) #14	RPS6KA2 (ENSOGAG00000006306) #20	ENSOGAG00000033842	RNASET2 (ENSOGAG00000006308) #18	CEP43 (ENSOGAG00000006310) #17	CCR6 (ENSOGAG00000025164) #16	ENSOGAG00000033331 #22	TTLL2 (ENSOGAG00000033615) #23	UNC93A (ENSOGAG00000027493) #24	AFDN (ENSOGAG00000003132) #25	KIF25 (ENSOGAG00000001753) #26	DACT2 (ENSOGAG00000005520) #28	SMOC2 (ENSOGAG00000009845) #29	THBS2 (ENSOGAG00000015677) #30	WDR27 (ENSOGAG00000014376) #31	C6orf120 (ENSOGAG00000014390) #32	PHF10 (ENSOGAG00000014391) #33	DYNLT2 (ENSOGAG00000014395) #34	ERMARD (ENSOGAG00000014725) #35	DLL1 (ENSOGAG00000033932) #36	FAM120B (ENSOGAG00000003357) #37	PSMB1 (ENSOGAG00000011331)
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00940000155310.b #8
Macaca	ANCESTRAL SPECIES	9	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00940000155310.b #8
Macaca_a	ANCESTRAL SPECIES	26	ENSGT00530000063168.b #37	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000155310.b #8	ENSGT00940000157330 #7
Rhesus	MODERN SPECIES	14	DLL1 (ENSMMUG00000021144) #36	ERMARD (ENSMMUG00000015341) #35	DYNLT2 (ENSMMUG00000015340) #34	ENSMMUG00000057888	PHF10 (ENSMMUG00000015335) #33	C4H6orf120 (ENSMMUG00000043752) #32	WDR27 (ENSMMUG00000015331) #31	THBS2 (ENSMMUG00000051514) #30	ENSMMUG00000057577	SMOC2 (ENSMMUG00000014474) #29	DACT2 (ENSMMUG00000004230) #28	FRMD1 (ENSMMUG00000020445)	KIF25 (ENSMMUG00000020444) #26	AFDN (ENSMMUG00000021044) #25	ENSMMUG00000062443	ENSMMUG00000029352 #22	TTLL2 (ENSMMUG00000005680) #23	UNC93A (ENSMMUG00000008228) #24	GPR31 (ENSMMUG00000060558) #21	CCR6 (ENSMMUG00000005676) #16	CEP43 (ENSMMUG00000005674) #17	RNASET2 (ENSMMUG00000005673) #18	RPS6KA2 (ENSMMUG00000005670) #20	MPC1 (ENSMMUG00000011739) #15	SFT2D1 (ENSMMUG00000011736) #14	PRR18 (ENSMMUG00000011700) #13	TBXT (ENSMMUG00000017047) #12	PDE10A (ENSMMUG00000023614) #11	C4H6orf118 (ENSMMUG00000023613) #10	ENSMMUG00000055955	QKI (ENSMMUG00000000428) #8
Crab-eating macaque	MODERN SPECIES	14	DLL1 (ENSMFAG00000002701) #36	ERMARD (ENSMFAG00000040535) #35	DYNLT2 (ENSMFAG00000000092) #34	PHF10 (ENSMFAG00000044678) #33	C6orf120 (ENSMFAG00000052899) #32	WDR27 (ENSMFAG00000031361) #31	THBS2 (ENSMFAG00000038327) #30	SMOC2 (ENSMFAG00000003901) #29	ENSMFAG00000061364	ENSMFAG00000054920 #28	ENSMFAG00000032095	FRMD1 (ENSMFAG00000002385)	ENSMFAG00000028175 #26	AFDN (ENSMFAG00000044776) #25	ENSMFAG00000047394	ENSMFAG00000032754 #22	TTLL2 (ENSMFAG00000041604) #23	UNC93A (ENSMFAG00000035470) #24	CCR6 (ENSMFAG00000062524) #16	CEP43 (ENSMFAG00000040151) #17	ENSMFAG00000049160	RNASET2 (ENSMFAG00000039774) #18	ENSMFAG00000051223	RPS6KA2 (ENSMFAG00000032453) #20	MPC1 (ENSMFAG00000003954) #15	SFT2D1 (ENSMFAG00000039956) #14	ENSMFAG00000059048 #13	ENSMFAG00000049559	TBXT (ENSMFAG00000030026) #12	PDE10A (ENSMFAG00000046132) #11	C6orf118 (ENSMFAG00000031329) #10
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000009405.b.c.a.a.d.a.a.a.a	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b.d #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00940000155310.b #8
Olive baboon	MODERN SPECIES	16	C6orf120 (ENSPANG00000013138) #32	WDR27 (ENSPANG00000017856) #31	THBS2 (ENSPANG00000010325) #30	ENSPANG00000046894	ENSPANG00000011796 #29	ENSPANG00000041762 #29	DACT2 (ENSPANG00000047307) #28	ENSPANG00000039413	ENSPANG00000051384	ENSPANG00000044048	FRMD1 (ENSPANG00000016089)	KIF25 (ENSPANG00000006177) #26	ENSPANG00000037433	AFDN (ENSPANG00000022297) #25	ENSPANG00000042736	ENSPANG00000008429 #22	UNC93A (ENSPANG00000022873) #24	GPR31 (ENSPANG00000045312) #21	CCR6 (ENSPANG00000038558) #16	CEP43 (ENSPANG00000008430) #17	RNASET2 (ENSPANG00000022370) #18	ENSPANG00000041620	RPS6KA2 (ENSPANG00000018198) #20	MPC1 (ENSPANG00000030766) #15	SFT2D1 (ENSPANG00000000460) #14	PRR18 (ENSPANG00000035337) #13	TBXT (ENSPANG00000005068) #12	PDE10A (ENSPANG00000019045) #11	C6orf118 (ENSPANG00000010211) #10	ENSPANG00000047222	QKI (ENSPANG00000006711) #8
Cercopithecinae_d	ANCESTRAL SPECIES	133	ENSGT00390000009405.b.c.a.a.d.a.a.a.a	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b.d #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00910000148244	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00940000157912 #12	ENSGT00390000012628.a.a.d.d.d.a	ENSGT00940000165037	ENSGT00910000147801	ENSGT00910000146857	ENSGT00940000156543 #11
Drill	DUPLICATION
Drill	MODERN SPECIES	1309	DOC2B (ENSMLEG00000000713)	ERMARD (ENSMLEG00000024927) #35	DYNLT2 (ENSMLEG00000039082) #34	PHF10 (ENSMLEG00000032564) #33	C6orf120 (ENSMLEG00000025329) #32	WDR27 (ENSMLEG00000035653) #31	THBS2 (ENSMLEG00000007131) #30	ENSMLEG00000038317	SMOC2 (ENSMLEG00000018210) #29	DACT2 (ENSMLEG00000005917) #28	ENSMLEG00000036011	FRMD1 (ENSMLEG00000040855)	KIF25 (ENSMLEG00000043513) #26	AFDN (ENSMLEG00000026403) #25	ENSMLEG00000037970 #22	ENSMLEG00000016774 #22	ENSMLEG00000024803	TTLL2 (ENSMLEG00000028265) #23	UNC93A (ENSMLEG00000033154) #24	CCR6 (ENSMLEG00000040801) #16	CEP43 (ENSMLEG00000030168) #17	RNASET2 (ENSMLEG00000020984) #18	RPS6KA2 (ENSMLEG00000018321) #20	ENSMLEG00000024978	MPC1 (ENSMLEG00000040167) #15	SFT2D1 (ENSMLEG00000036233) #14	TBXT (ENSMLEG00000028132) #12	ENSMLEG00000035760	ENSMLEG00000039755	ENSMLEG00000032182	ENSMLEG00000004880
Drill	MODERN SPECIES	1309	RPH3AL (ENSMLEG00000033754)	DOC2B (ENSMLEG00000000713)	ERMARD (ENSMLEG00000024927) #35	DYNLT2 (ENSMLEG00000039082) #34	PHF10 (ENSMLEG00000032564) #33	C6orf120 (ENSMLEG00000025329) #32	WDR27 (ENSMLEG00000035653) #31	THBS2 (ENSMLEG00000007131) #30	ENSMLEG00000038317	SMOC2 (ENSMLEG00000018210) #29	DACT2 (ENSMLEG00000005917) #28	ENSMLEG00000036011	FRMD1 (ENSMLEG00000040855)	KIF25 (ENSMLEG00000043513) #26	AFDN (ENSMLEG00000026403) #25	ENSMLEG00000037970 #22	ENSMLEG00000016774 #22	ENSMLEG00000024803	TTLL2 (ENSMLEG00000028265) #23	UNC93A (ENSMLEG00000033154) #24	CCR6 (ENSMLEG00000040801) #16	CEP43 (ENSMLEG00000030168) #17	RNASET2 (ENSMLEG00000020984) #18	RPS6KA2 (ENSMLEG00000018321) #20	ENSMLEG00000024978	MPC1 (ENSMLEG00000040167) #15	SFT2D1 (ENSMLEG00000036233) #14	TBXT (ENSMLEG00000028132) #12	ENSMLEG00000035760	ENSMLEG00000039755	ENSMLEG00000032182
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	601															ENSCATG00000030196 #22	ENSCATG00000029309 #22	ENSCATG00000042642	TTLL2 (ENSCATG00000036959) #23	UNC93A (ENSCATG00000020918) #24
Sooty mangabey	MODERN SPECIES	601																ENSCATG00000030196 #22	ENSCATG00000029309 #22	ENSCATG00000042642	TTLL2 (ENSCATG00000036959) #23	UNC93A (ENSCATG00000020918) #24
Rhinopithecus	ANCESTRAL SPECIES	324		ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1771																ENSRROG00000045395 #22	TTLL2 (ENSRROG00000039272) #23	UNC93A (ENSRROG00000007145) #24	ENSRROG00000044016 #22	ENSRROG00000041983 #22
Golden snub-nosed monkey	MODERN SPECIES	1771															ENSRROG00000041983 #22	ENSRROG00000044016 #22	UNC93A (ENSRROG00000007145) #24	TTLL2 (ENSRROG00000039272) #23	ENSRROG00000045395 #22
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172.d #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000154957.B.s.b	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172.d #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00580000082081	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000154957.B.s.b	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172.d #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00580000082081	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a.a #18	ENSGT00940000154957.B.s.b	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Gorilla	MODERN SPECIES	19	PRKN (ENSGGOG00000041961)	PACRG (ENSGGOG00000014095) #7	QKI (ENSGGOG00000000733) #8	C6orf118 (ENSGGOG00000014415) #10	ENSGGOG00000003914 #11	TBXT (ENSGGOG00000007693) #12	ENSGGOG00000028089 #13	SFT2D1 (ENSGGOG00000024304) #14	ENSGGOG00000038590 #15	RPS6KA2 (ENSGGOG00000004934) #20	ENSGGOG00000041475	RNASET2 (ENSGGOG00000000498) #18	CEP43 (ENSGGOG00000024970) #17	CCR6 (ENSGGOG00000040098) #16	GPR31 (ENSGGOG00000007378) #21	ENSGGOG00000040061 #22	ENSGGOG00000011740 #24	TTLL2 (ENSGGOG00000014857) #23	ENSGGOG00000011747 #22	AFDN (ENSGGOG00000007655) #25	ENSGGOG00000037096	KIF25 (ENSGGOG00000010256) #26	FRMD1 (ENSGGOG00000010265)	ENSGGOG00000028273	DACT2 (ENSGGOG00000024682) #28	SMOC2 (ENSGGOG00000012868) #29	THBS2 (ENSGGOG00000002892) #30	WDR27 (ENSGGOG00000034862) #31	C6orf120 (ENSGGOG00000015234) #32	PHF10 (ENSGGOG00000015238) #33	ENSGGOG00000041996
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172.d #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00580000082081	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a.a #18	ENSGT00940000154957.B.s.b	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Pan	ANCESTRAL SPECIES	5	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172.d #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00580000082081	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a.a #18	ENSGT00940000154957.B.s.b	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857	ENSGT00940000156543 #11
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	19	DLL1 (ENSPTRG00000018824) #36	ERMARD (ENSPTRG00000018821) #35	DYNLT2 (ENSPTRG00000018820) #34	ENSPTRG00000045102	PHF10 (ENSPTRG00000018819) #33	C6H6orf120 (ENSPTRG00000029334) #32	WDR27 (ENSPTRG00000018817) #31	THBS2 (ENSPTRG00000047585) #30	SMOC2 (ENSPTRG00000018815) #29	DACT2 (ENSPTRG00000029335) #28	FRMD1 (ENSPTRG00000018813)	KIF25 (ENSPTRG00000051777) #26	ENSPTRG00000050527	AFDN (ENSPTRG00000018810) #25	ENSPTRG00000047620 #22	ENSPTRG00000047252 #22	TTLL2 (ENSPTRG00000018805) #23	UNC93A (ENSPTRG00000018803) #24	ENSPTRG00000018802 #22	GPR31 (ENSPTRG00000018800) #21	CEP43 (ENSPTRG00000033965) #17	RNASET2 (ENSPTRG00000018796) #18	ENSPTRG00000047422	RPS6KA2 (ENSPTRG00000018793) #20	MPC1 (ENSPTRG00000024084) #15	SFT2D1 (ENSPTRG00000023700) #14	PRR18 (ENSPTRG00000018790) #13	TBXT (ENSPTRG00000018789) #12	PDE10A (ENSPTRG00000018787) #11	C6H6orf118 (ENSPTRG00000018786) #10	QKI (ENSPTRG00000018785) #8
Chimpanzee	MODERN SPECIES	19	FAM120B (ENSPTRG00000018825) #37	DLL1 (ENSPTRG00000018824) #36	ERMARD (ENSPTRG00000018821) #35	DYNLT2 (ENSPTRG00000018820) #34	ENSPTRG00000045102	PHF10 (ENSPTRG00000018819) #33	C6H6orf120 (ENSPTRG00000029334) #32	WDR27 (ENSPTRG00000018817) #31	THBS2 (ENSPTRG00000047585) #30	SMOC2 (ENSPTRG00000018815) #29	DACT2 (ENSPTRG00000029335) #28	FRMD1 (ENSPTRG00000018813)	KIF25 (ENSPTRG00000051777) #26	ENSPTRG00000050527	AFDN (ENSPTRG00000018810) #25	ENSPTRG00000047620 #22	ENSPTRG00000047252 #22	TTLL2 (ENSPTRG00000018805) #23	UNC93A (ENSPTRG00000018803) #24	ENSPTRG00000018802 #22	GPR31 (ENSPTRG00000018800) #21	CEP43 (ENSPTRG00000033965) #17	RNASET2 (ENSPTRG00000018796) #18	ENSPTRG00000047422	RPS6KA2 (ENSPTRG00000018793) #20	MPC1 (ENSPTRG00000024084) #15	SFT2D1 (ENSPTRG00000023700) #14	PRR18 (ENSPTRG00000018790) #13	TBXT (ENSPTRG00000018789) #12	PDE10A (ENSPTRG00000018787) #11	C6H6orf118 (ENSPTRG00000018786) #10
Bonobo	MODERN SPECIES	19	PACRG (ENSPPAG00000000755) #7	ENSPPAG00000038059 #8	C6orf118 (ENSPPAG00000032502) #10	ENSPPAG00000034143 #11	ENSPPAG00000025444	TBXT (ENSPPAG00000030203) #12	SFT2D1 (ENSPPAG00000001173) #14	ENSPPAG00000034758 #15	RPS6KA2 (ENSPPAG00000038721) #20	ENSPPAG00000038016	RNASET2 (ENSPPAG00000031557) #18	CEP43 (ENSPPAG00000039127) #17	CCR6 (ENSPPAG00000035908) #16	GPR31 (ENSPPAG00000013225) #21	ENSPPAG00000028331 #22	ENSPPAG00000031294 #22	UNC93A (ENSPPAG00000034812) #24	TTLL2 (ENSPPAG00000043935) #23	ENSPPAG00000040260 #22	ENSPPAG00000025522	AFDN (ENSPPAG00000018981) #25	ENSPPAG00000024492	KIF25 (ENSPPAG00000031142) #26	FRMD1 (ENSPPAG00000026820)	ENSPPAG00000037243	DACT2 (ENSPPAG00000041516) #28	SMOC2 (ENSPPAG00000037853) #29	THBS2 (ENSPPAG00000040021) #30	WDR27 (ENSPPAG00000025177) #31	C6orf120 (ENSPPAG00000024959) #32	PHF10 (ENSPPAG00000001816) #33
Gibbon	MODERN SPECIES	18	DLL1 (ENSNLEG00000000274) #36	ERMARD (ENSNLEG00000000248) #35	DYNLT2 (ENSNLEG00000000245) #34	ENSNLEG00000034285	PHF10 (ENSNLEG00000000230) #33	C6orf120 (ENSNLEG00000000227) #32	ENSNLEG00000000221 #31	THBS2 (ENSNLEG00000001271) #30	ENSNLEG00000001270	SMOC2 (ENSNLEG00000001262) #29	ENSNLEG00000029660 #28	ENSNLEG00000033655	FRMD1 (ENSNLEG00000000364)	KIF25 (ENSNLEG00000000354) #26	AFDN (ENSNLEG00000000333) #25	ENSNLEG00000033899 #22	TTLL2 (ENSNLEG00000031278) #23	UNC93A (ENSNLEG00000011647) #24	ENSNLEG00000011641 #22	CCR6 (ENSNLEG00000032795) #16	CEP43 (ENSNLEG00000011605) #17	RNASET2 (ENSNLEG00000027795) #18	ENSNLEG00000034042	RPS6KA2 (ENSNLEG00000011560) #20	ENSNLEG00000032002 #15	SFT2D1 (ENSNLEG00000031636) #14	TBXT (ENSNLEG00000011552) #12	ENSNLEG00000033543	ENSNLEG00000011508 #11	C6orf118 (ENSNLEG00000011493) #10	ENSNLEG00000011478 #8
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.n.b.a #22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.n.b.a #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.n.b.a #22
Orangutan	MODERN SPECIES	19	FAM120B (ENSPPYG00000017190) #37	DLL1 (ENSPPYG00000017189) #36	ERMARD (ENSPPYG00000017186) #35	DYNLT2 (ENSPPYG00000017187) #34	PHF10 (ENSPPYG00000017185) #33	C6orf120 (ENSPPYG00000030948) #32	WDR27 (ENSPPYG00000017183) #31	THBS2 (ENSPPYG00000017264) #30	SMOC2 (ENSPPYG00000017182) #29	DACT2 (ENSPPYG00000017181) #28	FRMD1 (ENSPPYG00000017180)	ENSPPYG00000017178	ENSPPYG00000017179 #26	AFDN (ENSPPYG00000017176) #25	ENSPPYG00000017174	ENSPPYG00000017172 #22	TTLL2 (ENSPPYG00000017171) #23	UNC93A (ENSPPYG00000017170) #24	GPR31 (ENSPPYG00000017169) #21	CCR6 (ENSPPYG00000017168) #16	CEP43 (ENSPPYG00000032640) #17	RNASET2 (ENSPPYG00000037542) #18	RPS6KA2 (ENSPPYG00000017167) #20	ENSPPYG00000017166 #15	ENSPPYG00000017165 #14	PRR18 (ENSPPYG00000017164) #13	ENSPPYG00000032308	TBXT (ENSPPYG00000017163) #12	PDE10A (ENSPPYG00000017162) #11	C6orf118 (ENSPPYG00000017161) #10	QKI (ENSPPYG00000017160) #8
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00910000146892	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00910000146893
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00910000146892	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172.d #33	ENSGT00910000146893
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00580000082081	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172.d #33	ENSGT00910000146893
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00580000082081	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172.d #33	ENSGT00910000146893
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00580000082081	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172.d #33	ENSGT00910000146893
Pan	ANCESTRAL SPECIES	5	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00580000082081	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172.d #33	ENSGT00910000146893
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	19	PRKN (ENSPPAG00000034661)	PACRG (ENSPPAG00000000755) #7	ENSPPAG00000038059 #8	C6orf118 (ENSPPAG00000032502) #10	ENSPPAG00000034143 #11	ENSPPAG00000025444	TBXT (ENSPPAG00000030203) #12	SFT2D1 (ENSPPAG00000001173) #14	ENSPPAG00000034758 #15	RPS6KA2 (ENSPPAG00000038721) #20	ENSPPAG00000038016	RNASET2 (ENSPPAG00000031557) #18	CEP43 (ENSPPAG00000039127) #17	CCR6 (ENSPPAG00000035908) #16	GPR31 (ENSPPAG00000013225) #21	ENSPPAG00000028331 #22	ENSPPAG00000031294 #22	UNC93A (ENSPPAG00000034812) #24	TTLL2 (ENSPPAG00000043935) #23	ENSPPAG00000040260 #22	ENSPPAG00000025522	AFDN (ENSPPAG00000018981) #25	ENSPPAG00000024492	KIF25 (ENSPPAG00000031142) #26	FRMD1 (ENSPPAG00000026820)	ENSPPAG00000037243	DACT2 (ENSPPAG00000041516) #28	SMOC2 (ENSPPAG00000037853) #29	THBS2 (ENSPPAG00000040021) #30	WDR27 (ENSPPAG00000025177) #31	C6orf120 (ENSPPAG00000024959) #32
Bonobo	MODERN SPECIES	19	ERMARD (ENSPPAG00000041843) #35	DYNLT2 (ENSPPAG00000030827) #34	ENSPPAG00000028171	PHF10 (ENSPPAG00000001816) #33	C6orf120 (ENSPPAG00000024959) #32	WDR27 (ENSPPAG00000025177) #31	THBS2 (ENSPPAG00000040021) #30	SMOC2 (ENSPPAG00000037853) #29	DACT2 (ENSPPAG00000041516) #28	ENSPPAG00000037243	FRMD1 (ENSPPAG00000026820)	KIF25 (ENSPPAG00000031142) #26	ENSPPAG00000024492	AFDN (ENSPPAG00000018981) #25	ENSPPAG00000025522	ENSPPAG00000040260 #22	TTLL2 (ENSPPAG00000043935) #23	UNC93A (ENSPPAG00000034812) #24	ENSPPAG00000031294 #22	ENSPPAG00000028331 #22	GPR31 (ENSPPAG00000013225) #21	CCR6 (ENSPPAG00000035908) #16	CEP43 (ENSPPAG00000039127) #17	RNASET2 (ENSPPAG00000031557) #18	ENSPPAG00000038016	RPS6KA2 (ENSPPAG00000038721) #20	ENSPPAG00000034758 #15	SFT2D1 (ENSPPAG00000001173) #14	TBXT (ENSPPAG00000030203) #12	ENSPPAG00000025444	ENSPPAG00000034143 #11
Chimpanzee	MODERN SPECIES	19	AGPAT4 (ENSPTRG00000018779)	PRKN (ENSPTRG00000018781)	PACRG (ENSPTRG00000048824) #7	QKI (ENSPTRG00000018785) #8	C6H6orf118 (ENSPTRG00000018786) #10	PDE10A (ENSPTRG00000018787) #11	TBXT (ENSPTRG00000018789) #12	PRR18 (ENSPTRG00000018790) #13	SFT2D1 (ENSPTRG00000023700) #14	MPC1 (ENSPTRG00000024084) #15	RPS6KA2 (ENSPTRG00000018793) #20	ENSPTRG00000047422	RNASET2 (ENSPTRG00000018796) #18	CEP43 (ENSPTRG00000033965) #17	GPR31 (ENSPTRG00000018800) #21	ENSPTRG00000018802 #22	UNC93A (ENSPTRG00000018803) #24	TTLL2 (ENSPTRG00000018805) #23	ENSPTRG00000047252 #22	ENSPTRG00000047620 #22	AFDN (ENSPTRG00000018810) #25	ENSPTRG00000050527	KIF25 (ENSPTRG00000051777) #26	FRMD1 (ENSPTRG00000018813)	DACT2 (ENSPTRG00000029335) #28	SMOC2 (ENSPTRG00000018815) #29	THBS2 (ENSPTRG00000047585) #30	WDR27 (ENSPTRG00000018817) #31	C6H6orf120 (ENSPTRG00000029334) #32	PHF10 (ENSPTRG00000018819) #33	ENSPTRG00000045102
Gorilla	MODERN SPECIES	19	FAM120B (ENSGGOG00000005207) #37	DLL1 (ENSGGOG00000005504) #36	ERMARD (ENSGGOG00000017025) #35	ENSGGOG00000041996	PHF10 (ENSGGOG00000015238) #33	C6orf120 (ENSGGOG00000015234) #32	WDR27 (ENSGGOG00000034862) #31	THBS2 (ENSGGOG00000002892) #30	SMOC2 (ENSGGOG00000012868) #29	DACT2 (ENSGGOG00000024682) #28	ENSGGOG00000028273	FRMD1 (ENSGGOG00000010265)	KIF25 (ENSGGOG00000010256) #26	ENSGGOG00000037096	AFDN (ENSGGOG00000007655) #25	ENSGGOG00000011747 #22	TTLL2 (ENSGGOG00000014857) #23	ENSGGOG00000011740 #24	ENSGGOG00000040061 #22	GPR31 (ENSGGOG00000007378) #21	CCR6 (ENSGGOG00000040098) #16	CEP43 (ENSGGOG00000024970) #17	RNASET2 (ENSGGOG00000000498) #18	ENSGGOG00000041475	RPS6KA2 (ENSGGOG00000004934) #20	ENSGGOG00000038590 #15	SFT2D1 (ENSGGOG00000024304) #14	ENSGGOG00000028089 #13	TBXT (ENSGGOG00000007693) #12	ENSGGOG00000003914 #11	C6orf118 (ENSGGOG00000014415) #10
Gibbon	MODERN SPECIES	18	ENSNLEG00000011464	PRKN (ENSNLEG00000011473)	PACRG (ENSNLEG00000011474) #7	ENSNLEG00000011478 #8	C6orf118 (ENSNLEG00000011493) #10	ENSNLEG00000011508 #11	ENSNLEG00000033543	TBXT (ENSNLEG00000011552) #12	SFT2D1 (ENSNLEG00000031636) #14	ENSNLEG00000032002 #15	RPS6KA2 (ENSNLEG00000011560) #20	ENSNLEG00000034042	RNASET2 (ENSNLEG00000027795) #18	CEP43 (ENSNLEG00000011605) #17	CCR6 (ENSNLEG00000032795) #16	ENSNLEG00000011641 #22	UNC93A (ENSNLEG00000011647) #24	TTLL2 (ENSNLEG00000031278) #23	ENSNLEG00000033899 #22	AFDN (ENSNLEG00000000333) #25	KIF25 (ENSNLEG00000000354) #26	FRMD1 (ENSNLEG00000000364)	ENSNLEG00000033655	ENSNLEG00000029660 #28	SMOC2 (ENSNLEG00000001262) #29	ENSNLEG00000001270	THBS2 (ENSNLEG00000001271) #30	ENSNLEG00000000221 #31	C6orf120 (ENSNLEG00000000227) #32	PHF10 (ENSNLEG00000000230) #33	ENSNLEG00000034285
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00910000146857	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00910000146892	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00400000024673 #19	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00910000146892	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00910000146893
Vervet Monkey	MODERN SPECIES	4	PRKN (ENSCSAG00000012267)	QKI (ENSCSAG00000012257) #8	ENSCSAG00000012244	C6orf118 (ENSCSAG00000012234) #10	PDE10A (ENSCSAG00000012225) #11	ENSCSAG00000012208	TBXT (ENSCSAG00000012200) #12	PRR18 (ENSCSAG00000012184) #13	SFT2D1 (ENSCSAG00000012180) #14	RPS6KA2 (ENSCSAG00000012167) #20	ENSCSAG00000012150 #19	RNASET2 (ENSCSAG00000012144) #18	CEP43 (ENSCSAG00000012128) #17	CCR6 (ENSCSAG00000012111) #16	GPR31 (ENSCSAG00000018984) #21	ENSCSAG00000012101 #22	UNC93A (ENSCSAG00000012079) #24	TTLL2 (ENSCSAG00000012063) #23	ENSCSAG00000012055	AFDN (ENSCSAG00000012040) #25	KIF25 (ENSCSAG00000012027) #26	FRMD1 (ENSCSAG00000012014)	DACT2 (ENSCSAG00000011983) #28	SMOC2 (ENSCSAG00000011975) #29	WDR27 (ENSCSAG00000011948) #31	C6orf120 (ENSCSAG00000018985) #32	PHF10 (ENSCSAG00000011872) #33	DYNLT2 (ENSCSAG00000011862) #34	ERMARD (ENSCSAG00000011852) #35	PDCD2 (ENSCSAG00000011842)	TBP (ENSCSAG00000011839)
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00940000162756.n	ENSGT00730000111539	ENSGT00730000111511	ENSGT00550000076318	ENSGT00390000001157.A.a	ENSGT00940000159077
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00730000111141.i	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00950000183564	ENSGT00730000111463	ENSGT00390000015202	ENSGT00530000064274	ENSGT01090000260341	ENSGT00840000130947
Hominidae	ANCESTRAL SPECIES	25	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00910000148274	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00950000183564	ENSGT00730000111463	ENSGT00390000015202	ENSGT00530000064274	ENSGT01090000260341	ENSGT00840000130947
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00390000010806.u.a.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00910000148274	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00950000183564	ENSGT00730000111463	ENSGT00390000015202	ENSGT00530000064274	ENSGT01090000260341
Gorilla	MODERN SPECIES	12	ATP5PO (ENSGGOG00000012611)	ITSN1 (ENSGGOG00000012580)	CRYZL1 (ENSGGOG00000041978)	DONSON (ENSGGOG00000012322)	SON (ENSGGOG00000010481)	GART (ENSGGOG00000010461)	ENSGGOG00000026021	TMEM50B (ENSGGOG00000034844)	IFNGR2 (ENSGGOG00000007591)	IFNAR1 (ENSGGOG00000022174)	IL10RB (ENSGGOG00000012242)	IFNAR2 (ENSGGOG00000039376)	ENSGGOG00000009078	PAXBP1 (ENSGGOG00000016944)	SYNJ1 (ENSGGOG00000015945)	TCP10L (ENSGGOG00000042620) #22	EVA1C (ENSGGOG00000005797)	URB1 (ENSGGOG00000000285)	MRAP (ENSGGOG00000000284)	MIS18A (ENSGGOG00000004831)	HUNK (ENSGGOG00000016651)	SCAF4 (ENSGGOG00000015557)	SOD1 (ENSGGOG00000015554)	ENSGGOG00000024857	TIAM1 (ENSGGOG00000014747)	KRTAP7-1 (ENSGGOG00000041734)	KRTAP8-1 (ENSGGOG00000026820)	KRTAP21-2 (ENSGGOG00000023357)	KRTAP20-3 (ENSGGOG00000038558)	KRTAP20-4 (ENSGGOG00000040267)	KRTAP20-1 (ENSGGOG00000023946)
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00390000010806.u.a.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00910000148274	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00950000183564	ENSGT00730000111463	ENSGT00390000015202	ENSGT00530000064274	ENSGT01090000260341
Pan	ANCESTRAL SPECIES	27	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00390000010806.u.a.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00910000148274	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00950000183564	ENSGT00730000111463	ENSGT00390000015202	ENSGT00530000064274	ENSGT01090000260341
Bonobo	MODERN SPECIES	12	SON (ENSPPAG00000033712)	GART (ENSPPAG00000030199)	DNAJC28 (ENSPPAG00000032964)	ENSPPAG00000029021	TMEM50B (ENSPPAG00000028426)	IFNGR2 (ENSPPAG00000025558)	ENSPPAG00000021540	IFNAR1 (ENSPPAG00000014398)	IL10RB (ENSPPAG00000010535)	IFNAR2 (ENSPPAG00000035117)	ENSPPAG00000034805	ENSPPAG00000034697	PAXBP1 (ENSPPAG00000034585)	SYNJ1 (ENSPPAG00000026784)	ENSPPAG00000009038	TCP10L (ENSPPAG00000007355) #22	EVA1C (ENSPPAG00000005532)	URB1 (ENSPPAG00000003423)	MRAP (ENSPPAG00000002893)	MIS18A (ENSPPAG00000001292)	HUNK (ENSPPAG00000032225)	SCAF4 (ENSPPAG00000028535)	ENSPPAG00000027217	ENSPPAG00000026185	TIAM1 (ENSPPAG00000033381)	ENSPPAG00000030797	KRTAP19-8 (ENSPPAG00000032522)	KRTAP11-1 (ENSPPAG00000032405)	KRTAP7-1 (ENSPPAG00000032653)	KRTAP8-1 (ENSPPAG00000032139)	KRTAP21-1 (ENSPPAG00000030330)
Chimpanzee	MODERN SPECIES	12	DNAJC28 (ENSPTRG00000013870)	ENSPTRG00000045137	TMEM50B (ENSPTRG00000013869)	IFNGR2 (ENSPTRG00000013868)	ENSPTRG00000047250	IFNAR1 (ENSPTRG00000013867)	ENSPTRG00000013866	IFNAR2 (ENSPTRG00000013865)	ENSPTRG00000049835	ENSPTRG00000051983	ENSPTRG00000051353	C21H21orf62 (ENSPTRG00000013862)	PAXBP1 (ENSPTRG00000013861)	SYNJ1 (ENSPTRG00000023787)	CFAP298 (ENSPTRG00000013857)	TCP10L (ENSPTRG00000013856) #22	EVA1C (ENSPTRG00000013854)	URB1 (ENSPTRG00000013852)	MRAP (ENSPTRG00000013851)	MIS18A (ENSPTRG00000013850)	HUNK (ENSPTRG00000013849)	SCAF4 (ENSPTRG00000013848)	SOD1 (ENSPTRG00000013847)	TIAM1 (ENSPTRG00000013846)	ENSPTRG00000044292	KRTAP19-8 (ENSPTRG00000031445)	KRTAP11-1 (ENSPTRG00000013844)	KRTAP7-1 (ENSPTRG00000052397)	KRTAP8-1 (ENSPTRG00000013843)	KRTAP21-1 (ENSPTRG00000013842)	KRTAP21-3 (ENSPTRG00000041998)
Human	MODERN SPECIES	13	SON (ENSG00000159140)	GART (ENSG00000159131)	DNAJC28 (ENSG00000177692)	TMEM50B (ENSG00000142188)	IFNGR2 (ENSG00000159128)	IFNAR1 (ENSG00000142166)	IL10RB (ENSG00000243646)	IFNAR2-IL10RB (ENSG00000249624)	IFNAR2 (ENSG00000159110)	OLIG1 (ENSG00000184221)	OLIG2 (ENSG00000205927)	C21orf62 (ENSG00000205929)	PAXBP1 (ENSG00000159086)	SYNJ1 (ENSG00000159082)	CFAP298 (ENSG00000159079)	TCP10L (ENSG00000242220) #22	EVA1C (ENSG00000166979)	CFAP298-TCP10L (ENSG00000265590)	URB1 (ENSG00000142207)	MRAP (ENSG00000170262)	MIS18A (ENSG00000159055)	HUNK (ENSG00000142149)	SCAF4 (ENSG00000156304)	SOD1 (ENSG00000142168)	TIAM1 (ENSG00000156299)	KRTAP19-8 (ENSG00000206102)	KRTAP11-1 (ENSG00000182591)	KRTAP7-1 (ENSG00000274749)	KRTAP8-1 (ENSG00000183640)	KRTAP21-1 (ENSG00000187005)	KRTAP21-2 (ENSG00000187026)
Orangutan	MODERN SPECIES	12	GART (ENSPPYG00000011379)	DNAJC28 (ENSPPYG00000011378)	TMEM50B (ENSPPYG00000011377)	IFNGR2 (ENSPPYG00000029536)	ENSPPYG00000011375	IFNAR1 (ENSPPYG00000011374)	IL10RB (ENSPPYG00000011373)	IFNAR2 (ENSPPYG00000011372)	OLIG1 (ENSPPYG00000011370)	OLIG2 (ENSPPYG00000011369)	ENSPPYG00000011368	PAXBP1 (ENSPPYG00000011366)	ENSPPYG00000036409	ENSPPYG00000011365	CFAP298 (ENSPPYG00000011364)	ENSPPYG00000011363 #22	EVA1C (ENSPPYG00000011361)	URB1 (ENSPPYG00000011359)	MRAP (ENSPPYG00000011358)	ENSPPYG00000011357	HUNK (ENSPPYG00000011356)	SCAF4 (ENSPPYG00000011355)	SOD1 (ENSPPYG00000011354)	TIAM1 (ENSPPYG00000011351)	KRTAP19-8 (ENSPPYG00000037907)	KRTAP11-1 (ENSPPYG00000011349)	KRTAP8-1 (ENSPPYG00000011348)	KRTAP21-2 (ENSPPYG00000011347)	KRTAP21-3 (ENSPPYG00000011346)	KRTAP20-2 (ENSPPYG00000011345)	KRTAP20-1 (ENSPPYG00000011549)
Gibbon	MODERN SPECIES	17	DONSON (ENSNLEG00000004043)	SON (ENSNLEG00000004002)	GART (ENSNLEG00000003903)	DNAJC28 (ENSNLEG00000003899)	ENSNLEG00000033116	ENSNLEG00000003887	IFNGR2 (ENSNLEG00000003878)	IFNAR1 (ENSNLEG00000003846)	IL10RB (ENSNLEG00000003835)	IFNAR2 (ENSNLEG00000003834)	OLIG2 (ENSNLEG00000003822)	ENSNLEG00000003819	PAXBP1 (ENSNLEG00000003751)	ENSNLEG00000003734	CFAP298 (ENSNLEG00000030059)	TCP10L (ENSNLEG00000031925) #22	EVA1C (ENSNLEG00000003679)	URB1 (ENSNLEG00000026872)	MRAP (ENSNLEG00000003671)	MIS18A (ENSNLEG00000003662)	HUNK (ENSNLEG00000036238)	SCAF4 (ENSNLEG00000003569)	SOD1 (ENSNLEG00000003545)	ENSNLEG00000028524	TIAM1 (ENSNLEG00000003443)	KRTAP7-1 (ENSNLEG00000018513)	KRTAP8-1 (ENSNLEG00000018512)	KRTAP21-1 (ENSNLEG00000003439)	KRTAP20-3 (ENSNLEG00000032887)	KRTAP20-2 (ENSNLEG00000003437)	KRTAP20-1 (ENSNLEG00000018510)
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00940000159781 #36	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b.b.a #22	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00400000024673 #19	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00910000146857
Rhinopithecus	ANCESTRAL SPECIES	324			ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24
Golden snub-nosed monkey	MODERN SPECIES	2456													FRMD1 (ENSRROG00000041890)	KIF25 (ENSRROG00000031374) #26	AFDN (ENSRROG00000029936) #25	ENSRROG00000039308 #22
Black snub-nosed monkey	MODERN SPECIES	122	RADIL (ENSRBIG00000033281)	ENSRBIG00000033873	ERMARD (ENSRBIG00000040263) #35	DYNLT2 (ENSRBIG00000037613) #34	PHF10 (ENSRBIG00000038851) #33	ENSRBIG00000036112	C6orf120 (ENSRBIG00000030217) #32	WDR27 (ENSRBIG00000039911) #31	THBS2 (ENSRBIG00000031348) #30	ENSRBIG00000024955	SMOC2 (ENSRBIG00000032102) #29	ENSRBIG00000041229 #28	FRMD1 (ENSRBIG00000033925)	KIF25 (ENSRBIG00000029247) #26	AFDN (ENSRBIG00000038335) #25	ENSRBIG00000044780 #22	TTLL2 (ENSRBIG00000029475) #23	UNC93A (ENSRBIG00000032627) #24
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.n.b.b.b.a #22
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000009405.b.c.a.a.d.a.a.a.a	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000153095.g.b.a.a.a.b.b.b
Macaca	ANCESTRAL SPECIES	9	ENSGT00390000009405.b.c.a.a.d.a.a.a.a	ENSGT00390000001024 #35	ENSGT00940000160069 #34	ENSGT00910000146893	ENSGT00940000155172 #33	ENSGT00390000018879 #32	ENSGT00390000012017 #31	ENSGT00940000157846 #30	ENSGT00910000146892	ENSGT00390000018436.a.b #29	ENSGT00950000183181.A.a #28	ENSGT00950000182767.b.b.d.hb.a.a.a.a.b	ENSGT00940000162787	ENSGT00940000162166 #26	ENSGT00940000155237 #25	ENSGT00530000063927.a.a.n.b.b.b.a #22	ENSGT00530000063927.a.a.n.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00990000203619.A.b.b.a #21	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543 #11	ENSGT00390000009877 #10	ENSGT00940000153095.g.b.a.a.a.b.b.b
Pig-tailed macaque	MODERN SPECIES	139	ENSMNEG00000003909	ERMARD (ENSMNEG00000034869) #35	DYNLT2 (ENSMNEG00000038700) #34	ENSMNEG00000038520	PHF10 (ENSMNEG00000026524) #33	C6orf120 (ENSMNEG00000015607) #32	WDR27 (ENSMNEG00000040662) #31	THBS2 (ENSMNEG00000039912) #30	ENSMNEG00000036760	SMOC2 (ENSMNEG00000020280) #29	DACT2 (ENSMNEG00000039050) #28	ENSMNEG00000030291	FRMD1 (ENSMNEG00000042258)	KIF25 (ENSMNEG00000040085) #26	AFDN (ENSMNEG00000030609) #25	ENSMNEG00000035667 #22	TTLL2 (ENSMNEG00000043374) #23	UNC93A (ENSMNEG00000033918) #24	CCR6 (ENSMNEG00000033597) #16	CEP43 (ENSMNEG00000044780) #17	RNASET2 (ENSMNEG00000033732) #18	RPS6KA2 (ENSMNEG00000028453) #20	MPC1 (ENSMNEG00000030001) #15	SFT2D1 (ENSMNEG00000034299) #14	TBXT (ENSMNEG00000040011) #12	ENSMNEG00000037990	ENSMNEG00000022920	ENSMNEG00000038868	PDE10A (ENSMNEG00000027445) #11	C6orf118 (ENSMNEG00000036512) #10	ENSMNEG00000026836
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.i.b	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00940000162756.n	ENSGT00730000111539	ENSGT00730000111511	ENSGT00550000076318
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT00940000162756.n.c	ENSGT00730000111539	ENSGT00730000111511	ENSGT00550000076318
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.i.b	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00910000148238	ENSGT00550000076318	ENSGT00940000159077	ENSGT00940000162550	ENSGT00940000156253
Macaca	ANCESTRAL SPECIES	3	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00940000158406.g	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00390000009366.c.b	ENSGT00940000156294	ENSGT00910000148238	ENSGT00550000076318	ENSGT00940000159077	ENSGT00940000162550	ENSGT00940000156253
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00390000000447.g.b	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.j	ENSGT00940000160503	ENSGT00940000158406.g	ENSGT00940000158231	ENSGT00940000158406.h	ENSGT00510000049322	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT01100000263493.a.a.a.b.a.b.a.b.b.b	ENSGT01100000263539.b.a.a.a.b.b.b.a.a.a.a.b	ENSGT01100000263493.a.b.a.a.b.a.b.a.a	ENSGT00940000156294	ENSGT00390000006922.m.b.b.b.b	ENSGT00730000111463	ENSGT00940000162109.A	ENSGT00940000162756.m.a
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000028965	SON (ENSMFAG00000034427)	GART (ENSMFAG00000037958)	ENSMFAG00000053974	DNAJC28 (ENSMFAG00000030067)	TMEM50B (ENSMFAG00000057725)	IFNGR2 (ENSMFAG00000001717)	IFNAR1 (ENSMFAG00000043614)	IL10RB (ENSMFAG00000039570)	OLIG2 (ENSMFAG00000048902)	ENSMFAG00000065085	C21orf62 (ENSMFAG00000036953)	PAXBP1 (ENSMFAG00000002885)	SYNJ1 (ENSMFAG00000018883)	CFAP298 (ENSMFAG00000037088)	TCP10L (ENSMFAG00000045781) #22	EVA1C (ENSMFAG00000034125)	URB1 (ENSMFAG00000034391)	MRAP (ENSMFAG00000000802)	MIS18A (ENSMFAG00000033702)	HUNK (ENSMFAG00000043007)	SOD1 (ENSMFAG00000041240)	SCAF4 (ENSMFAG00000037668)	ENSMFAG00000049480	ENSMFAG00000063674	ENSMFAG00000065247	TIAM1 (ENSMFAG00000002250)	ENSMFAG00000051140	KRTAP11-1 (ENSMFAG00000060023)	ENSMFAG00000044254	KRTAP13-4 (ENSMFAG00000061177)
Pig-tailed macaque	MODERN SPECIES	503	SON (ENSMNEG00000031671)	GART (ENSMNEG00000037254)	DNAJC28 (ENSMNEG00000024298)	ENSMNEG00000015660	IFNGR2 (ENSMNEG00000034803)	ENSMNEG00000033464	IL10RB (ENSMNEG00000030377)	IFNAR2 (ENSMNEG00000041434)	OLIG1 (ENSMNEG00000026267)	OLIG2 (ENSMNEG00000040394)	C21orf62 (ENSMNEG00000018708)	PAXBP1 (ENSMNEG00000031929)	ENSMNEG00000010802	SYNJ1 (ENSMNEG00000040077)	CFAP298 (ENSMNEG00000030779)	TCP10L (ENSMNEG00000039234) #22	EVA1C (ENSMNEG00000035226)	URB1 (ENSMNEG00000032981)	MRAP (ENSMNEG00000013893)	MIS18A (ENSMNEG00000028369)	HUNK (ENSMNEG00000044157)	SCAF4 (ENSMNEG00000032966)	SOD1 (ENSMNEG00000007968)	ENSMNEG00000040507	ENSMNEG00000044900	TIAM1 (ENSMNEG00000044871)	ENSMNEG00000041828	KRTAP21-1 (ENSMNEG00000035289)	ENSMNEG00000044081	KRTAP6-1 (ENSMNEG00000043342)	KRTAP6-2 (ENSMNEG00000037108)
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.i.b	ENSGT00940000160503	ENSGT00940000158406.j	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00940000156294	ENSGT00910000148238	ENSGT00550000076318	ENSGT00940000159077	ENSGT00940000162550	ENSGT00940000156253	ENSGT00940000158923
Olive baboon	MODERN SPECIES	14	DONSON (ENSPANG00000016795)	SON (ENSPANG00000024077)	GART (ENSPANG00000008639)	DNAJC28 (ENSPANG00000017491)	TMEM50B (ENSPANG00000018699)	IFNGR2 (ENSPANG00000024564)	IFNAR1 (ENSPANG00000007665)	IL10RB (ENSPANG00000021145)	IFNAR2 (ENSPANG00000022203)	OLIG2 (ENSPANG00000040767)	ENSPANG00000047617	C21orf62 (ENSPANG00000017134)	PAXBP1 (ENSPANG00000022535)	SYNJ1 (ENSPANG00000022531)	CFAP298 (ENSPANG00000022530)	TCP10L (ENSPANG00000021143) #22	EVA1C (ENSPANG00000015096)	URB1 (ENSPANG00000021964)	MRAP (ENSPANG00000011261)	MIS18A (ENSPANG00000019589)	HUNK (ENSPANG00000022529)	SOD1 (ENSPANG00000022109)	SCAF4 (ENSPANG00000017332)	TIAM1 (ENSPANG00000016520)	ENSPANG00000006687	KRTAP11-1 (ENSPANG00000051150)	KRTAP7-1 (ENSPANG00000035065)	KRTAP8-1 (ENSPANG00000038315)	ENSPANG00000035982	ENSPANG00000045506	KRTAP20-2 (ENSPANG00000046975)
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.i.b	ENSGT00940000160503	ENSGT00940000158406.j	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00910000147901	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00940000156294	ENSGT00910000148238	ENSGT00390000015202	ENSGT01090000260341	ENSGT00950000183372	ENSGT00950000183416
Sooty mangabey	MODERN SPECIES	465	SON (ENSCATG00000029812)	GART (ENSCATG00000037670)	DNAJC28 (ENSCATG00000014045)	TMEM50B (ENSCATG00000038801)	IFNGR2 (ENSCATG00000023151)	IFNAR1 (ENSCATG00000038339)	IL10RB (ENSCATG00000031730)	IFNAR2 (ENSCATG00000018593)	OLIG1 (ENSCATG00000018778)	OLIG2 (ENSCATG00000044610)	C21orf62 (ENSCATG00000043153)	PAXBP1 (ENSCATG00000030287)	ENSCATG00000016391	SYNJ1 (ENSCATG00000033891)	CFAP298 (ENSCATG00000037049)	TCP10L (ENSCATG00000010454) #22	EVA1C (ENSCATG00000027012)	URB1 (ENSCATG00000042630)	MRAP (ENSCATG00000042418)	MIS18A (ENSCATG00000034951)	HUNK (ENSCATG00000028680)	SCAF4 (ENSCATG00000030379)	SOD1 (ENSCATG00000040821)	ENSCATG00000040145	TIAM1 (ENSCATG00000015629)	ENSCATG00000042584	ENSCATG00000039770	KRTAP7-1 (ENSCATG00000011966)	KRTAP21-1 (ENSCATG00000034414)	KRTAP6-1 (ENSCATG00000045292)	KRTAP6-2 (ENSCATG00000036799)
Drill	MODERN SPECIES	998										OLIG2 (ENSMLEG00000006770)	C21orf62 (ENSMLEG00000034397)	PAXBP1 (ENSMLEG00000033450)	ENSMLEG00000025731	SYNJ1 (ENSMLEG00000037029)	CFAP298 (ENSMLEG00000028996)	TCP10L (ENSMLEG00000032376) #22	EVA1C (ENSMLEG00000031085)	URB1 (ENSMLEG00000041435)	MRAP (ENSMLEG00000033382)	MIS18A (ENSMLEG00000038072)	HUNK (ENSMLEG00000038042)	SCAF4 (ENSMLEG00000039674)	SOD1 (ENSMLEG00000034867)	ENSMLEG00000033917	TIAM1 (ENSMLEG00000033214)	ENSMLEG00000033272	KRTAP7-1 (ENSMLEG00000003571)	KRTAP21-1 (ENSMLEG00000035329)
Vervet Monkey	MODERN SPECIES	11	DONSON (ENSCSAG00000009862)	SON (ENSCSAG00000009823)	GART (ENSCSAG00000009808)	DNAJC28 (ENSCSAG00000018685)	TMEM50B (ENSCSAG00000009794)	IFNGR2 (ENSCSAG00000009779)	IFNAR1 (ENSCSAG00000009748)	IL10RB (ENSCSAG00000009740)	IFNAR2 (ENSCSAG00000009735)	OLIG1 (ENSCSAG00000018686)	OLIG2 (ENSCSAG00000018687)	C21orf62 (ENSCSAG00000018688)	PAXBP1 (ENSCSAG00000009717)	SYNJ1 (ENSCSAG00000009654)	CFAP298 (ENSCSAG00000009638)	TCP10L (ENSCSAG00000009632) #22	EVA1C (ENSCSAG00000009625)	URB1 (ENSCSAG00000009584)	MRAP (ENSCSAG00000009456)	MIS18A (ENSCSAG00000009453)	HUNK (ENSCSAG00000009448)	SCAF4 (ENSCSAG00000009438)	TIAM1 (ENSCSAG00000009418)	KRTAP11-1 (ENSCSAG00000018689)	KRTAP8-1 (ENSCSAG00000018690)	ENSCSAG00000009398	ENSCSAG00000009387	ENSCSAG00000018691	KRTAP20-3 (ENSCSAG00000018692)	ENSCSAG00000018693	ENSCSAG00000018694
Rhinopithecus	ANCESTRAL SPECIES	70	ENSGT00390000000447	ENSGT00730000111141	ENSGT00390000000292.C	ENSGT00940000154065.b	ENSGT00940000155131.i.b	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000162722	ENSGT00940000161651	ENSGT00390000016499	ENSGT00390000000455.a	ENSGT00940000157964	ENSGT00390000006278	ENSGT00530000063927.a.a.n.b.b.b.b #22	ENSGT00940000162103	ENSGT00390000014210	ENSGT00650000093475	ENSGT00940000154267.B	ENSGT00940000161070	ENSGT00530000063946.a	ENSGT00940000155551	ENSGT00940000155898.d	ENSGT00940000156294	ENSGT00940000155050.c.b	ENSGT01000000215755	ENSGT00950000183372	ENSGT00950000183416	ENSGT01100000263699
Black snub-nosed monkey	MODERN SPECIES	741	ENSRBIG00000032684	DONSON (ENSRBIG00000002546)	ENSRBIG00000044269	GART (ENSRBIG00000044178)	ENSRBIG00000030889	IFNGR2 (ENSRBIG00000032595)	IFNAR1 (ENSRBIG00000036473)	IL10RB (ENSRBIG00000034310)	IFNAR2 (ENSRBIG00000044541)	OLIG1 (ENSRBIG00000025302)	OLIG2 (ENSRBIG00000044608)	C21orf62 (ENSRBIG00000029872)	PAXBP1 (ENSRBIG00000041633)	SYNJ1 (ENSRBIG00000034477)	CFAP298 (ENSRBIG00000026515)	TCP10L (ENSRBIG00000033081) #22	EVA1C (ENSRBIG00000034927)	URB1 (ENSRBIG00000033122)	MRAP (ENSRBIG00000040139)	MIS18A (ENSRBIG00000038961)	HUNK (ENSRBIG00000031500)	SCAF4 (ENSRBIG00000040007)	SOD1 (ENSRBIG00000029804)	TIAM1 (ENSRBIG00000033361)	ENSRBIG00000039717	ENSRBIG00000014035
Golden snub-nosed monkey	MODERN SPECIES	3327	CRYZL1 (ENSRROG00000042116)	DONSON (ENSRROG00000041828)	SON (ENSRROG00000042156)	GART (ENSRROG00000031998)	DNAJC28 (ENSRROG00000017528)	TMEM50B (ENSRROG00000036102)	IFNGR2 (ENSRROG00000034676)	IFNAR1 (ENSRROG00000033842)	IL10RB (ENSRROG00000030503)	IFNAR2 (ENSRROG00000033750)	OLIG2 (ENSRROG00000043658)	C21orf62 (ENSRROG00000006711)	PAXBP1 (ENSRROG00000003787)	SYNJ1 (ENSRROG00000039256)	CFAP298 (ENSRROG00000037887)	TCP10L (ENSRROG00000026998) #22	EVA1C (ENSRROG00000036246)	URB1 (ENSRROG00000040237)	MRAP (ENSRROG00000037714)	MIS18A (ENSRROG00000037936)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543.e #11	ENSGT00910000146857	ENSGT00940000156543.f.b #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00530000063927.a.a.n.b #22	ENSGT00530000063359.A #24	ENSGT00940000162752 #23	ENSGT00530000063927.a.a.o.b #22
Cebidae	ANCESTRAL SPECIES	5	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543.e #11	ENSGT00910000146857	ENSGT00940000156543.f.b #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00530000063927.a.a.n.b #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Marmoset	DUPLICATION
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	16	TBXT (ENSCJAG00000012508) #12	PRR18 (ENSCJAG00000012527) #13	SFT2D1 (ENSCJAG00000012533) #14	ENSCJAG00000012552 #15	RPS6KA2 (ENSCJAG00000000462) #20	ENSCJAG00000077718	ENSCJAG00000000469 #18	ENSCJAG00000053408	ENSCJAG00000073948	CEP43 (ENSCJAG00000000473) #17	ENSCJAG00000076555	ENSCJAG00000077314	ENSCJAG00000082139	CCR6 (ENSCJAG00000076944) #16	ENSCJAG00000082400 #22	ENSCJAG00000077331 #22	TTLL2 (ENSCJAG00000012870) #23	UNC93A (ENSCJAG00000012850) #24	ENSCJAG00000080705 #22	AFDN (ENSCJAG00000014702) #25	FRMD1 (ENSCJAG00000084557)	ENSCJAG00000082788	DACT2 (ENSCJAG00000003529) #28	SMOC2 (ENSCJAG00000043849) #29	ENSCJAG00000072855	ENSCJAG00000070516	THBS2 (ENSCJAG00000003506) #30	WDR27 (ENSCJAG00000003481) #31	C6orf120 (ENSCJAG00000072984) #32	PHF10 (ENSCJAG00000003436) #33	DYNLT2 (ENSCJAG00000003429) #34
Marmoset	MODERN SPECIES	16	PDE10A (ENSCJAG00000012410) #11	TBXT (ENSCJAG00000012508) #12	PRR18 (ENSCJAG00000012527) #13	SFT2D1 (ENSCJAG00000012533) #14	ENSCJAG00000012552 #15	RPS6KA2 (ENSCJAG00000000462) #20	ENSCJAG00000077718	ENSCJAG00000000469 #18	ENSCJAG00000053408	ENSCJAG00000073948	CEP43 (ENSCJAG00000000473) #17	ENSCJAG00000076555	ENSCJAG00000077314	ENSCJAG00000082139	CCR6 (ENSCJAG00000076944) #16	ENSCJAG00000082400 #22	ENSCJAG00000077331 #22	TTLL2 (ENSCJAG00000012870) #23	UNC93A (ENSCJAG00000012850) #24	ENSCJAG00000080705 #22	AFDN (ENSCJAG00000014702) #25	FRMD1 (ENSCJAG00000084557)	ENSCJAG00000082788	DACT2 (ENSCJAG00000003529) #28	SMOC2 (ENSCJAG00000043849) #29	ENSCJAG00000072855	ENSCJAG00000070516	THBS2 (ENSCJAG00000003506) #30	WDR27 (ENSCJAG00000003481) #31	C6orf120 (ENSCJAG00000072984) #32	PHF10 (ENSCJAG00000003436) #33
Marmoset	MODERN SPECIES	16	DLL1 (ENSCJAG00000020658) #36	ENSCJAG00000059991	ERMARD (ENSCJAG00000003391) #35	DYNLT2 (ENSCJAG00000003429) #34	PHF10 (ENSCJAG00000003436) #33	C6orf120 (ENSCJAG00000072984) #32	WDR27 (ENSCJAG00000003481) #31	THBS2 (ENSCJAG00000003506) #30	ENSCJAG00000070516	ENSCJAG00000072855	SMOC2 (ENSCJAG00000043849) #29	DACT2 (ENSCJAG00000003529) #28	ENSCJAG00000082788	FRMD1 (ENSCJAG00000084557)	AFDN (ENSCJAG00000014702) #25	ENSCJAG00000080705 #22	UNC93A (ENSCJAG00000012850) #24	TTLL2 (ENSCJAG00000012870) #23	ENSCJAG00000077331 #22	ENSCJAG00000082400 #22	CCR6 (ENSCJAG00000076944) #16	ENSCJAG00000082139	ENSCJAG00000077314	ENSCJAG00000076555	CEP43 (ENSCJAG00000000473) #17	ENSCJAG00000073948	ENSCJAG00000053408	ENSCJAG00000000469 #18	ENSCJAG00000077718	RPS6KA2 (ENSCJAG00000000462) #20	ENSCJAG00000012552 #15
Mas night monkey	MODERN SPECIES	1228								TBXT (ENSANAG00000035431) #12	PRR18 (ENSANAG00000020254) #13	SFT2D1 (ENSANAG00000019628) #14	MPC1 (ENSANAG00000025179) #15	RPS6KA2 (ENSANAG00000036583) #20	RNASET2 (ENSANAG00000025875) #18	CEP43 (ENSANAG00000027428) #17	CCR6 (ENSANAG00000024393) #16	ENSANAG00000021339 #22	UNC93A (ENSANAG00000021160) #24
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	36	ENSGT00390000003152.j	ENSGT00940000159161	ENSGT00940000153139.A	ENSGT00390000016366	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.j	ENSGT01030000234513.B.b.i	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a.o.a #22	ENSGT00530000063927.a.b ##22	ENSGT00940000157559	ENSGT00940000159259.b
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000159161	ENSGT00940000153139.A	ENSGT00390000016366	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.j	ENSGT01030000234513.B.b.i	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000182415	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a.o.a #22
Mas night monkey	MODERN SPECIES	339																ENSANAG00000029806 #22	ENSANAG00000025499 ##22	RNF17 (ENSANAG00000029969)	ENSANAG00000025485	ENSANAG00000035801	TEKT4 (ENSANAG00000028852)	ENSANAG00000018980	ATP12A (ENSANAG00000034276)
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000159161	ENSGT00940000153139.A	ENSGT00390000016366	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.j	ENSGT01030000234513.B.b.i	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000182415	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a.o.a #22
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00500000045005	ENSGT00390000003152.j.vb	ENSGT00940000159161	ENSGT00940000153139.A	ENSGT00390000016366	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.j	ENSGT01030000234513.B.b.i	ENSGT00940000157028	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.a.o.a #22
Capuchin	MODERN SPECIES	204	ENSCCAG00000030799	XPO4 (ENSCCAG00000020123)	EEF1AKMT1 (ENSCCAG00000026801)	IL17D (ENSCCAG00000037480)	IFT88 (ENSCCAG00000032883)	CRYL1 (ENSCCAG00000027310)	GJB6 (ENSCCAG00000031996)	GJB2 (ENSCCAG00000032636)	ZMYM2 (ENSCCAG00000029184)	ENSCCAG00000001171	ZMYM5 (ENSCCAG00000031521)	ENSCCAG00000019454	PSPC1 (ENSCCAG00000033498)	MPHOSPH8 (ENSCCAG00000034840)	PARP4 (ENSCCAG00000032863)	ENSCCAG00000025463 #22	ENSCCAG00000027047
Simiiformes	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.o.b #22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.o.b #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.o.b #22
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.o.b #22
Golden snub-nosed monkey	MODERN SPECIES	1771																ENSRROG00000041983 #22	ENSRROG00000044016 #22	UNC93A (ENSRROG00000007145) #24	TTLL2 (ENSRROG00000039272) #23	ENSRROG00000045395 #22
Platyrrhini	ANCESTRAL SPECIES	2																ENSGT00530000063927.a.a.o.b #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00530000063927.a.a.n.b #22	ENSGT01030000234667.b #16	ENSGT00390000007441 #17	ENSGT00640000091563.a #18	ENSGT00940000159956 #20	ENSGT00510000046988 #15	ENSGT00390000018525.a.a #14	ENSGT00390000002164 #13	ENSGT00940000157912 #12	ENSGT00940000156543.f.b #11	ENSGT00910000146857	ENSGT00940000156543.e #11	ENSGT00390000009877 #10
Cebidae	ANCESTRAL SPECIES																	ENSGT00530000063927.a.a.o.b #22
Cebidae_a	ANCESTRAL SPECIES	181																ENSGT00530000063927.a.a.o.b #22	ENSGT00940000162752 #23
Capuchin	MODERN SPECIES	927																TCP10L2 (ENSCCAG00000021619) #22	TTLL2 (ENSCCAG00000021700) #23
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Suina	ANCESTRAL SPECIES	18	ENSGT00940000155208	ENSGT00880000138034	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Pig	MODERN SPECIES		PRKN (ENSSSCG00000004032)	ENSSSCG00000047165	PACRG (ENSSSCG00000038153) #7	QKI (ENSSSCG00000004029) #8	ENSSSCG00000051306	PDE10A (ENSSSCG00000004027) #11	TBXT (ENSSSCG00000036609) #12	SFT2D1 (ENSSSCG00000004020) #14	ENSSSCG00000032916 #15	RPS6KA2 (ENSSSCG00000004022) #20	ENSSSCG00000004024 #18	CEP43 (ENSSSCG00000004023) #17	ENSSSCG00000034196	CCR6 (ENSSSCG00000024562) #16	GPR31 (ENSSSCG00000062590) #21	ENSSSCG00000032403 #22	UNC93A (ENSSSCG00000027404) #24	AFDN (ENSSSCG00000004018) #25	ENSSSCG00000004016 #26	FRMD1 (ENSSSCG00000004017)	DACT2 (ENSSSCG00000031703) #28	SMOC2 (ENSSSCG00000004013) #29	THBS2 (ENSSSCG00000004012) #30	WDR27 (ENSSSCG00000004008) #31	C6orf120 (ENSSSCG00000038931) #32	PHF10 (ENSSSCG00000030155) #33	DYNLT2 (ENSSSCG00000004009) #34	ERMARD (ENSSSCG00000004010) #35	DLL1 (ENSSSCG00000027726) #36	ENSSSCG00000049216	FAM120B (ENSSSCG00000029697) #37
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00390000011034	ENSGT00950000186343	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Pecora	ANCESTRAL SPECIES	19	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00940000162994.f.d.k.b	ENSGT00940000163337.b	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35
Yarkand deer	MODERN SPECIES	18	AGPAT4 (ENSCHYG00000025772)	PRKN (ENSCHYG00000025824)	PACRG (ENSCHYG00000025979) #7	QKI (ENSCHYG00000026014) #8	C6orf118 (ENSCHYG00000026045) #10	PDE10A (ENSCHYG00000026108) #11	ENSCHYG00000026255	TBXT (ENSCHYG00000026275) #12	SFT2D1 (ENSCHYG00000026311) #14	MPC1 (ENSCHYG00000026331) #15	RPS6KA2 (ENSCHYG00000026381) #20	RNASET2 (ENSCHYG00000026522) #18	ENSCHYG00000026541 #17	CCR6 (ENSCHYG00000026557) #16	GPR31 (ENSCHYG00000026561) #21	ENSCHYG00000026568 #22	TTLL2 (ENSCHYG00000026577) #23	UNC93A (ENSCHYG00000026589) #24	AFDN (ENSCHYG00000026646) #25	ENSCHYG00000026733 #26	FRMD1 (ENSCHYG00000026739)	ENSCHYG00000026752	ENSCHYG00000026761	ENSCHYG00000026774 #28	SMOC2 (ENSCHYG00000026811) #29	THBS2 (ENSCHYG00000026871) #30	WDR27 (ENSCHYG00000026908) #31	C6orf120 (ENSCHYG00000026921) #32	PHF10 (ENSCHYG00000026928) #33	DYNLT2 (ENSCHYG00000026938) #34	ERMARD (ENSCHYG00000026945) #35
Percora_a	ANCESTRAL SPECIES	21	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Bovidae	ANCESTRAL SPECIES	21	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Bovinae	ANCESTRAL SPECIES	35	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Bos	ANCESTRAL SPECIES	19	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT00960000189610	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017.fb #31	ENSGT00390000012017.gb #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36
Bos_b	ANCESTRAL SPECIES	42	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT00960000189610	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017.fb #31	ENSGT00390000012017.gb #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36
Hybrid Bos Indicus	MODERN SPECIES	28	PRKN (ENSBIXG00005007712)	PACRG (ENSBIXG00005013833) #7	ENSBIXG00005013801	QKI (ENSBIXG00005007533) ##8	ENSBIXG00005001665	C6orf118 (ENSBIXG00005013567) #10	PDE10A (ENSBIXG00005013474) #11	TBXT (ENSBIXG00005013358) #12	SFT2D1 (ENSBIXG00005013324) #14	MPC1 (ENSBIXG00005006802) #15	RPS6KA2 (ENSBIXG00005013242) #20	RNASET2 (ENSBIXG00005013120) #18	CEP43 (ENSBIXG00005013080) #17	CCR6 (ENSBIXG00005007110) #16	GPR31 (ENSBIXG00005012976) #21	ENSBIXG00005012953 #22	TTLL2 (ENSBIXG00005001456) #23	UNC93A (ENSBIXG00005012929) #24	AFDN (ENSBIXG00005012820) #25	ENSBIXG00005001388 #26	ENSBIXG00005001381	ENSBIXG00005012456 #28	SMOC2 (ENSBIXG00005012408) #29	THBS2 (ENSBIXG00005006211) #30	WDR27 (ENSBIXG00005012263) #31	ENSBIXG00005012226	ENSBIXG00005012212	PHF10 (ENSBIXG00005001259) #33	DYNLT2 (ENSBIXG00005012132) #34	ERMARD (ENSBIXG00005012059) #35	DLL1 (ENSBIXG00005011768) #36
Caprinae	ANCESTRAL SPECIES		ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a.c.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Goat	DUPLICATION
Goat	MODERN SPECIES	28	ENSCHIG00000015636 #7	QKI (ENSCHIG00000018891) #8	ENSCHIG00000012121	C6orf118 (ENSCHIG00000013027) #10	PDE10A (ENSCHIG00000022822) #11	ENSCHIG00000021845	ENSCHIG00000005334	ENSCHIG00000021177	TBXT (ENSCHIG00000011143) #12	ENSCHIG00000010788 #14	MPC1 (ENSCHIG00000016041) #15	RPS6KA2 (ENSCHIG00000016479) #20	RNASET2 (ENSCHIG00000021432) #18	CEP43 (ENSCHIG00000023724) #17	CCR6 (ENSCHIG00000025437) #16	ENSCHIG00000025672 #22	ENSCHIG00000010837 #22	TTLL2 (ENSCHIG00000023826) #23	AFDN (ENSCHIG00000022083) #25	ENSCHIG00000008025 #26	SMOC2 (ENSCHIG00000024776) #29	THBS2 (ENSCHIG00000016627) #30	WDR27 (ENSCHIG00000014042) #31	PHF10 (ENSCHIG00000020859) #33	C6orf120 (ENSCHIG00000005386) #32	DYNLT2 (ENSCHIG00000004372) #34	ERMARD (ENSCHIG00000017737) #35	DLL1 (ENSCHIG00000020787) #36	FAM120B (ENSCHIG00000026475) #37	PSMB1 (ENSCHIG00000026669)	ENSCHIG00000008033
Goat	MODERN SPECIES	28	QKI (ENSCHIG00000018891) #8	ENSCHIG00000012121	C6orf118 (ENSCHIG00000013027) #10	PDE10A (ENSCHIG00000022822) #11	ENSCHIG00000021845	ENSCHIG00000005334	ENSCHIG00000021177	TBXT (ENSCHIG00000011143) #12	ENSCHIG00000010788 #14	MPC1 (ENSCHIG00000016041) #15	RPS6KA2 (ENSCHIG00000016479) #20	RNASET2 (ENSCHIG00000021432) #18	CEP43 (ENSCHIG00000023724) #17	CCR6 (ENSCHIG00000025437) #16	ENSCHIG00000025672 #22	ENSCHIG00000010837 #22	TTLL2 (ENSCHIG00000023826) #23	AFDN (ENSCHIG00000022083) #25	ENSCHIG00000008025 #26	SMOC2 (ENSCHIG00000024776) #29	THBS2 (ENSCHIG00000016627) #30	WDR27 (ENSCHIG00000014042) #31	PHF10 (ENSCHIG00000020859) #33	C6orf120 (ENSCHIG00000005386) #32	DYNLT2 (ENSCHIG00000004372) #34	ERMARD (ENSCHIG00000017737) #35	DLL1 (ENSCHIG00000020787) #36	FAM120B (ENSCHIG00000026475) #37	PSMB1 (ENSCHIG00000026669)	ENSCHIG00000008033	PDCD2 (ENSCHIG00000017776)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988.i.a #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Equus	ANCESTRAL SPECIES	46	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00690000103860	ENSGT00390000018525.a.a #14	ENSGT00510000046988.i.a #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035
Horse	MODERN SPECIES	24	AGPAT4 (ENSECAG00000001189)	PRKN (ENSECAG00000004645)	PACRG (ENSECAG00000014308) #7	QKI (ENSECAG00000017504) #8	C31H6orf118 (ENSECAG00000000126) #10	PDE10A (ENSECAG00000008004) #11	TBXT (ENSECAG00000007994) #12	ENSECAG00000028989	SFT2D1 (ENSECAG00000019479) #14	MPC1 (ENSECAG00000020275) #15	RPS6KA2 (ENSECAG00000020508) #20	RNASET2 (ENSECAG00000038762) #18	CEP43 (ENSECAG00000019040) #17	CCR6 (ENSECAG00000005185) #16	GPR31 (ENSECAG00000005409) #21	ENSECAG00000003447 #22	UNC93A (ENSECAG00000008764) #24	AFDN (ENSECAG00000014680) #25	KIF25 (ENSECAG00000008965) #26	FRMD1 (ENSECAG00000010465)	ENSECAG00000056197	DACT2 (ENSECAG00000013363) #28	SMOC2 (ENSECAG00000014155) #29	THBS2 (ENSECAG00000021122) #30	WDR27 (ENSECAG00000014636) #31	C6orf120 (ENSECAG00000045604) #32	PHF10 (ENSECAG00000018858) #33	ERMARD (ENSECAG00000010933) #35	DLL1 (ENSECAG00000014357) #36	FAM120B (ENSECAG00000018901) #37	PSMB1 (ENSECAG00000021637)
Donkey	MODERN SPECIES	20	PRKN (ENSEASG00005019721)	PACRG (ENSEASG00005019723) #7	QKI (ENSEASG00005019724) #8	C6orf118 (ENSEASG00005019727) #10	PDE10A (ENSEASG00005019729) #11	TBXT (ENSEASG00005000114) #12	ENSEASG00005000239	ENSEASG00005011917	SFT2D1 (ENSEASG00005028687) #14	ENSEASG00005029716 #15	RPS6KA2 (ENSEASG00005000339) #20	RNASET2 (ENSEASG00005000345) #18	CEP43 (ENSEASG00005000363) #17	CCR6 (ENSEASG00005028790) #16	ENSEASG00005027533 #21	ENSEASG00005026055 #22	ENSEASG00005000398 #24	AFDN (ENSEASG00005000410) #25	ENSEASG00005000454 #26	ENSEASG00005000482	ENSEASG00005000507 #28	ENSEASG00005028919	SMOC2 (ENSEASG00005000517) #29	THBS2 (ENSEASG00005000536) #30	WDR27 (ENSEASG00005000548) #31	C6orf120 (ENSEASG00005038227) #32	PHF10 (ENSEASG00005000584) #33	DYNLT2 (ENSEASG00005000589) #34	ERMARD (ENSEASG00005000625) #35	ENSEASG00005032829	DLL1 (ENSEASG00005000906) #36
Carnivora	ANCESTRAL SPECIES	4	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #12	ENSGT00390000002164 #13	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Caniformia	ANCESTRAL SPECIES	3	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Ursidae	ANCESTRAL SPECIES	22	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37
Ursus	ANCESTRAL SPECIES	81	ENSGT00390000011034	ENSGT00970000197976	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017 #31	ENSGT00390000018879 #32	ENSGT00940000155172 #33	ENSGT00940000160069 #34	ENSGT00390000001024 #35	ENSGT00940000159781 #36	ENSGT00530000063168.b #37	ENSGT00550000075035.o.a	ENSGT00940000157474
Polar bear	MODERN SPECIES	150	ENSUMAG00000011681 #7	ENSUMAG00000011678 #7	QKI (ENSUMAG00000011658) #8	ENSUMAG00000011639	C6orf118 (ENSUMAG00000011626) #10	PDE10A (ENSUMAG00000011612) #11	ENSUMAG00000011603	TBXT (ENSUMAG00000011569) #12	ENSUMAG00000011556 #14	MPC1 (ENSUMAG00000011553) #15	RPS6KA2 (ENSUMAG00000011529) #20	ENSUMAG00000011501 #18	CEP43 (ENSUMAG00000011487) #17	CCR6 (ENSUMAG00000011482) #16	GPR31 (ENSUMAG00000011480) #21	ENSUMAG00000011474 #22	UNC93A (ENSUMAG00000011469) #24	AFDN (ENSUMAG00000009347) #25	ENSUMAG00000009159 #26	SMOC2 (ENSUMAG00000009131) #29	THBS2 (ENSUMAG00000008727) #30	WDR27 (ENSUMAG00000008657) #31	C6orf120 (ENSUMAG00000008635) #32	PHF10 (ENSUMAG00000008629) #33	DYNLT2 (ENSUMAG00000008622) #34	ERMARD (ENSUMAG00000008594) #35	DLL1 (ENSUMAG00000008582) #36	FAM120B (ENSUMAG00000008556) #37	PSMB1 (ENSUMAG00000008538)	ENSUMAG00000008535	TBP (ENSUMAG00000008530)
American black bear	MODERN SPECIES	1500														CCR6 (ENSUAMG00000022267) #16	ENSUAMG00000022266	ENSUAMG00000022265 #22	UNC93A (ENSUAMG00000022264) #24
Giant Panda	MODERN SPECIES	1	PACRG (ENSAMEG00000008449) #7	QKI (ENSAMEG00000008459) #8	ENSAMEG00000027289 #8	ENSAMEG00000028308	C6orf118 (ENSAMEG00000008271) #10	PDE10A (ENSAMEG00000008225) #11	TBXT (ENSAMEG00000009278) #12	SFT2D1 (ENSAMEG00000009311) #14	MPC1 (ENSAMEG00000009318) #15	RPS6KA2 (ENSAMEG00000009322) #20	ENSAMEG00000009376	ENSAMEG00000009382 #18	ENSAMEG00000009406 #17	CCR6 (ENSAMEG00000028123) #16	ENSAMEG00000009418 #21	ENSAMEG00000024255 #22	ENSAMEG00000009444 #23	ENSAMEG00000009446 #24	ENSAMEG00000009474 #25	ENSAMEG00000009494 #26	FRMD1 (ENSAMEG00000009505)	ENSAMEG00000027619 #28	SMOC2 (ENSAMEG00000005089) #29	THBS2 (ENSAMEG00000004995) #30	WDR27 (ENSAMEG00000016953) #31	C6orf120 (ENSAMEG00000018825) #32	PHF10 (ENSAMEG00000016962) #33	DYNLT2 (ENSAMEG00000016986) #34	ERMARD (ENSAMEG00000016991) #35	DLL1 (ENSAMEG00000017019) #36	FAM120B (ENSAMEG00000017036) #37
Canidae	ANCESTRAL SPECIES	34	ENSGT00950000182836.b.b.b.b	ENSGT00390000011034	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017.ib #31	ENSGT00390000012017.hb #31	ENSGT00390000006522.b	ENSGT01030000234610.a.a	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b	ENSGT01030000234610.b.b
Red fox	MODERN SPECIES	119	ENSVVUG00000001531 #7	ENSVVUG00000001516 #7	QKI (ENSVVUG00000001467) #8	ENSVVUG00000001421	CUNH6orf118 (ENSVVUG00000001400) #10	PDE10A (ENSVVUG00000001300) #11	ENSVVUG00000021701	TBXT (ENSVVUG00000021698) #12	SFT2D1 (ENSVVUG00000021697) #14	MPC1 (ENSVVUG00000021696) #15	RPS6KA2 (ENSVVUG00000021694) #20	RNASET2 (ENSVVUG00000021691) #18	CEP43 (ENSVVUG00000021689) #17	CCR6 (ENSVVUG00000021685) #16	GPR31 (ENSVVUG00000021684) #21	ENSVVUG00000021683 #22	TTLL2 (ENSVVUG00000021682) #23	UNC93A (ENSVVUG00000021681) #24	AFDN (ENSVVUG00000021664) #25	ENSVVUG00000021657 #26	FRMD1 (ENSVVUG00000021653)	ENSVVUG00000021651 #28
Canis_lupus	ANCESTRAL SPECIES		ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.a.b.b	ENSGT00940000157330 #7	ENSGT00940000155310.b #8	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000171186	ENSGT00940000157912 #12	ENSGT00390000003582.q.a.b.b.b	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #20	ENSGT00640000091563.a #18	ENSGT00390000007441 #17	ENSGT01030000234667.b #16	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00950000185354	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #26	ENSGT00940000162787	ENSGT00950000183181.A.a #28	ENSGT00390000018436.a.b #29	ENSGT00940000157846 #30	ENSGT00390000012017.ib #31	ENSGT00390000012017.hb #31	ENSGT00390000006522.b	ENSGT01030000234610.a.a	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b
Dog	DUPLICATION
Dog	MODERN SPECIES		QKI (ENSCAFG00845002617) #8	ENSCAFG00845004368	C6orf118 (ENSCAFG00845004390) #10	PDE10A (ENSCAFG00845004510) #11	ENSCAFG00845004656	TBXT (ENSCAFG00845004679) #12	ENSCAFG00845004701	SFT2D1 (ENSCAFG00845004712) #14	MPC1 (ENSCAFG00845004722) #15	RPS6KA2 (ENSCAFG00845004742) #20	RNASET2 (ENSCAFG00845004774) #18	CEP43 (ENSCAFG00845004808) #17	ENSCAFG00845004827	CCR6 (ENSCAFG00845004836) #16	GPR31 (ENSCAFG00845004842) #21	ENSCAFG00845004845 #22	ENSCAFG00845004856 #22	ENSCAFG00845004865	ENSCAFG00845004871 #23	UNC93A (ENSCAFG00845004882) #24	ENSCAFG00845004891	ENSCAFG00845004971 #25	ENSCAFG00845005088 #26	FRMD1 (ENSCAFG00845005116)	DACT2 (ENSCAFG00845005143) #28	SMOC2 (ENSCAFG00845005168) #29	THBS2 (ENSCAFG00845005227) #30	ENSCAFG00845005366 #31	DSE (ENSCAFG00845005500)	CALHM6 (ENSCAFG00845005516)	TRAPPC3L (ENSCAFG00845005532)
Dog	MODERN SPECIES		ENSCAFG00845004368	C6orf118 (ENSCAFG00845004390) #10	PDE10A (ENSCAFG00845004510) #11	ENSCAFG00845004656	TBXT (ENSCAFG00845004679) #12	ENSCAFG00845004701	SFT2D1 (ENSCAFG00845004712) #14	MPC1 (ENSCAFG00845004722) #15	RPS6KA2 (ENSCAFG00845004742) #20	RNASET2 (ENSCAFG00845004774) #18	CEP43 (ENSCAFG00845004808) #17	ENSCAFG00845004827	CCR6 (ENSCAFG00845004836) #16	GPR31 (ENSCAFG00845004842) #21	ENSCAFG00845004845 #22	ENSCAFG00845004856 #22	ENSCAFG00845004865	ENSCAFG00845004871 #23	UNC93A (ENSCAFG00845004882) #24	ENSCAFG00845004891	ENSCAFG00845004971 #25	ENSCAFG00845005088 #26	FRMD1 (ENSCAFG00845005116)	DACT2 (ENSCAFG00845005143) #28	SMOC2 (ENSCAFG00845005168) #29	THBS2 (ENSCAFG00845005227) #30	ENSCAFG00845005366 #31	DSE (ENSCAFG00845005500)	CALHM6 (ENSCAFG00845005516)	TRAPPC3L (ENSCAFG00845005532)	CALHM5 (ENSCAFG00845005557)