Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000011034	ENSGT00940000168329	ENSGT00940000157330 #8	ENSGT00940000155310.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #13	ENSGT00390000002164	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #16	ENSGT00640000091563.a #18	ENSGT00390000007441 #19	ENSGT01030000234667.b #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A #24	ENSGT00940000155237 #25	ENSGT00940000162166 #27	ENSGT00940000162787 #28	ENSGT00950000183181.A.a #29	ENSGT00390000018436.a.b #30	ENSGT00940000157846 #33	ENSGT00390000012017 #34	ENSGT00390000018879 #35	ENSGT00940000155172 #36	ENSGT00940000160069 #37	ENSGT00390000001024	ENSGT00940000159781	ENSGT00530000063168.b
Opossum	MODERN SPECIES	1	ENSMODG00000023273 #7	ENSMODG00000049428 #8	QKI (ENSMODG00000006434) #9	ENSMODG00000006367 #10	PDE10A (ENSMODG00000006355) #11	ENSMODG00000006322 #12	TBXT (ENSMODG00000006318) #13	SFT2D1 (ENSMODG00000025689) #14	ENSMODG00000023271 #15	RPS6KA2 (ENSMODG00000006241) #16	ENSMODG00000006251 #17	RNASET2 (ENSMODG00000006193) #18	ENSMODG00000006175 #19	CCR6 (ENSMODG00000037007) #20	GPR31 (ENSMODG00000006120) #21	ENSMODG00000029483 #22	TTLL2 (ENSMODG00000006111) #23	UNC93A (ENSMODG00000025690) #24	AFDN (ENSMODG00000006062) #25	ENSMODG00000040141 #26	ENSMODG00000037854 #27	ENSMODG00000005865 #28	ENSMODG00000005818 #29	SMOC2 (ENSMODG00000005807) #30	ENSMODG00000005785 #31	ENSMODG00000023269 #32	THBS2 (ENSMODG00000005780) #33	WDR27 (ENSMODG00000005707) #34	C6orf120 (ENSMODG00000023268) #35	PHF10 (ENSMODG00000005689) #36	TCTE3 (ENSMODG00000040827) #37
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000011034	ENSGT00940000168329	ENSGT00940000157330 #8	ENSGT00940000155310.b #9	ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #13	ENSGT00390000002164	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #16	ENSGT00640000091563.a #18	ENSGT00390000007441 #19	ENSGT01030000234667.b #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A.a #24	ENSGT00530000063359.A.b #24	ENSGT00940000155237 #25	ENSGT00940000162166 #27	ENSGT00940000162787 #28	ENSGT00950000183181.A.a #29	ENSGT00390000018436.a.b #30	ENSGT00940000157846 #33	ENSGT00390000012017 #34	ENSGT00390000018879 #35	ENSGT00940000155172 #36	ENSGT00940000160069 #37	ENSGT00390000001024	ENSGT00940000159781
Diprotodontia	ANCESTRAL SPECIES	63					ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #13	ENSGT00390000002164	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #16	ENSGT00640000091563.a #18	ENSGT00390000007441 #19	ENSGT01030000234667.b #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A.a #24	ENSGT00530000063359.A.b #24	ENSGT00940000155237 #25	ENSGT00940000162166 #27	ENSGT00940000162787 #28	ENSGT00950000183181.A.a #29	ENSGT00390000018436.a.b #30	ENSGT00940000157846 #33	ENSGT00390000012017 #34	ENSGT00390000018879 #35	ENSGT00940000155172 #36	ENSGT00940000160069 #37	ENSGT00390000001024	ENSGT00940000159781
Diprotodontia_a	ANCESTRAL SPECIES	61					ENSGT00390000009877 #10	ENSGT00940000156543 #11	ENSGT00940000157912 #13	ENSGT00390000002164	ENSGT00390000018525.a.a #14	ENSGT00510000046988 #15	ENSGT00940000159956 #16	ENSGT00640000091563.a #18	ENSGT00390000007441 #19	ENSGT01030000234667.b #20	ENSGT00990000203619.A.b.b.a #21	ENSGT00530000063927.a.a #22	ENSGT00940000162752 #23	ENSGT00530000063359.A.a #24	ENSGT00530000063359.A.b #24	ENSGT00940000155237 #25	ENSGT00940000162166 #27	ENSGT00940000162787 #28	ENSGT00950000183181.A.a #29	ENSGT00390000018436.a.b #30	ENSGT00940000157846 #33	ENSGT00390000012017 #34	ENSGT00390000018879 #35	ENSGT00940000155172 #36	ENSGT00940000160069 #37	ENSGT00390000001024	ENSGT00940000159781
koala	MODERN SPECIES	204			ENSPCIG00000026880 #10	PDE10A (ENSPCIG00000026876) #11	ENSPCIG00000001855	TBXT (ENSPCIG00000024819) #13	ENSPCIG00000016663	SFT2D1 (ENSPCIG00000016665) #14	MPC1 (ENSPCIG00000016667) #15	RPS6KA2 (ENSPCIG00000000840) #16	ENSPCIG00000000927	ENSPCIG00000000949	RNASET2 (ENSPCIG00000000971) #18	CEP43 (ENSPCIG00000000985) #19	CCR6 (ENSPCIG00000001021) #20	ENSPCIG00000001044 #22	ENSPCIG00000032715 #23	ENSPCIG00000001072 #24	ENSPCIG00000032251 #24	ENSPCIG00000036773 #24	AFDN (ENSPCIG00000012917) #25	KIF25 (ENSPCIG00000012915) #27	FRMD1 (ENSPCIG00000012914) #28	ENSPCIG00000012912 #29
Common wonbat	MODERN SPECIES	1119							TBXT (ENSVURG00010011203) #13	ENSVURG00010011194	SFT2D1 (ENSVURG00010011185) #14	ENSVURG00010011176 #15	RPS6KA2 (ENSVURG00010011160) #16	RNASET2 (ENSVURG00010011146) #18	CEP43 (ENSVURG00010011140) #19	CCR6 (ENSVURG00010011134) #20	GPR31 (ENSVURG00010011126) #21	ENSVURG00010011116 #22	TTLL2 (ENSVURG00010011107) #23	ENSVURG00010011098 #24	ENSVURG00010011091 #24
Tasmanian devil	MODERN SPECIES	3	AGPAT4 (ENSSHAG00000005957)	PACRG (ENSSHAG00000024668) #8	QKI (ENSSHAG00000028391) #9	ENSSHAG00000018375 #10	PDE10A (ENSSHAG00000018469) #11	ENSSHAG00000024973	TBXT (ENSSHAG00000018904) #13	ENSSHAG00000025239	SFT2D1 (ENSSHAG00000027257) #14	ENSSHAG00000022097 #15	RPS6KA2 (ENSSHAG00000006398) #16	RNASET2 (ENSSHAG00000011073) #18	CEP43 (ENSSHAG00000011825) #19	CCR6 (ENSSHAG00000012662) #20	ENSSHAG00000021292 #21	ENSSHAG00000013247 #22	ENSSHAG00000013448 #23	ENSSHAG00000013706 #24	ENSSHAG00000014075 #24	ENSSHAG00000016365 #25	ENSSHAG00000016621 #27	ENSSHAG00000016849 #28	ENSSHAG00000026396 #29	SMOC2 (ENSSHAG00000017999) #30	THBS2 (ENSSHAG00000004947) #33	ENSSHAG00000006847 #34	C6orf120 (ENSSHAG00000024283) #35	PHF10 (ENSSHAG00000009456) #36	DYNLT2 (ENSSHAG00000024623) #37	ERMARD (ENSSHAG00000010147)	DLL1 (ENSSHAG00000014603)