Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##19 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##19 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT01050000244868.a.a.a.a.a.b ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Pecora ANCESTRAL SPECIES 5 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000166736 ENSGT00940000157589 #36 Percora_a ANCESTRAL SPECIES 27 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000166736 ENSGT00940000157589 #36 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000166736 ENSGT00940000157589 #36 Bovinae ANCESTRAL SPECIES 4 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000166736 ENSGT00940000157589 #36 Bos ANCESTRAL SPECIES 5 ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00390000015224.c.a.a.b.e.a.a ##18 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Bos_b ANCESTRAL SPECIES 16 ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00390000015224.c.a.a.b.e.a.a ##18 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Cow MODERN SPECIES 2 CARD9 (ENSBTAG00000006572) #7 SNAPC4 (ENSBTAG00000000054) #8 ENTR1 (ENSBTAG00000001352) #9 PMPCA (ENSBTAG00000001353) #10 INPP5E (ENSBTAG00000001354) #11 SEC16A (ENSBTAG00000023933) #12 NOTCH1 (ENSBTAG00000022799) #13 ENSBTAG00000049379 #14 EGFL7 (ENSBTAG00000030278) #15 AGPAT2 (ENSBTAG00000025161) #16 DIPK1B (ENSBTAG00000021928) #17 ENSBTAG00000030281 #18 ABO (ENSBTAG00000012525) #19 SURF6 (ENSBTAG00000011554) #20 MED22 (ENSBTAG00000011556) #21 RPL7A (ENSBTAG00000011559) #22 SURF1 (ENSBTAG00000030384) #23 SURF2 (ENSBTAG00000000046) #24 SURF4 (ENSBTAG00000051352) #25 STKLD1 (ENSBTAG00000004140) #26 REXO4 (ENSBTAG00000019721) #27 ADAMTS13 (ENSBTAG00000015093) #28 ENSBTAG00000051781 #29 CACFD1 (ENSBTAG00000015097) #30 SLC2A6 (ENSBTAG00000001824) #31 MYMK (ENSBTAG00000013242) #32 ADAMTSL2 (ENSBTAG00000007492) #33 FAM163B (ENSBTAG00000051577) #34 DBH (ENSBTAG00000004508) #35 SARDH (ENSBTAG00000004510) #36 VAV2 (ENSBTAG00000004511) #37 Hybrid Bos Indicus MODERN SPECIES 2 CARD9 (ENSBIXG00005008353) #7 SNAPC4 (ENSBIXG00005008329) #8 ENTR1 (ENSBIXG00005008201) #9 PMPCA (ENSBIXG00005008108) #10 INPP5E (ENSBIXG00005000112) #11 SEC16A (ENSBIXG00005007954) #12 NOTCH1 (ENSBIXG00005029490) #13 ENSBIXG00005029555 #15 ENSBIXG00005029589 #16 DIPK1B (ENSBIXG00005029611) #17 ENSBIXG00005029644 ##18 ENSBIXG00005029668 #19 ENSBIXG00005029686 SURF6 (ENSBIXG00005029689) #20 MED22 (ENSBIXG00005029700) #21 ENSBIXG00005029716 #22 SURF1 (ENSBIXG00005029756) #23 SURF2 (ENSBIXG00005029782) #24 SURF4 (ENSBIXG00005029795) #25 STKLD1 (ENSBIXG00005029843) #26 REXO4 (ENSBIXG00005029874) #27 ADAMTS13 (ENSBIXG00005029885) #28 CACFD1 (ENSBIXG00005029903) #30 SLC2A6 (ENSBIXG00005029919) #31 MYMK (ENSBIXG00005029930) #32 ADAMTSL2 (ENSBIXG00005029943) #33 FAM163B (ENSBIXG00005029953) #34 DBH (ENSBIXG00005029981) #35 SARDH (ENSBIXG00005030013) #36 VAV2 (ENSBIXG00005030069) #37 ENSBIXG00005030113 Bos_a ANCESTRAL SPECIES 23 ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00390000015224.c.a.a.b.e.a.a ##18 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 28 CARD9 (ENSBGRG00000025118) #7 SNAPC4 (ENSBGRG00000025195) #8 ENSBGRG00000025344 ENTR1 (ENSBGRG00000025355) #9 PMPCA (ENSBGRG00000025447) #10 INPP5E (ENSBGRG00000025512) #11 SEC16A (ENSBGRG00000025640) #12 NOTCH1 (ENSBGRG00000025848) #13 ENSBGRG00000025875 #15 AGPAT2 (ENSBGRG00000025897) #16 DIPK1B (ENSBGRG00000025911) #17 ENSBGRG00000025928 ##18 ENSBGRG00000025935 #19 SURF6 (ENSBGRG00000025947) #20 MED22 (ENSBGRG00000025954) #21 ENSBGRG00000025968 #22 SURF1 (ENSBGRG00000003459) #23 SURF2 (ENSBGRG00000003491) #24 SURF4 (ENSBGRG00000003520) #25 STKLD1 (ENSBGRG00000003549) #26 REXO4 (ENSBGRG00000003644) #27 ADAMTS13 (ENSBGRG00000003687) #28 CACFD1 (ENSBGRG00000003856) #30 SLC2A6 (ENSBGRG00000003941) #31 MYMK (ENSBGRG00000003992) #32 ADAMTSL2 (ENSBGRG00000004026) #33 ENSBGRG00000004188 #34 ENSBGRG00000004221 #34 DBH (ENSBGRG00000004235) #35 SARDH (ENSBGRG00000004368) #36 VAV2 (ENSBGRG00000004554) #37 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 23 PIK3CG (ENSBGRG00000007268) ENSBGRG00000007454 ENSBGRG00000007323 ##14 ENSBGRG00000007347 NAMPT (ENSBGRG00000007410) ENSBGRG00000007872 ENSBGRG00000007936 ENSBGRG00000007980 CDHR3 (ENSBGRG00000008038) ATXN7L1 (ENSBGRG00000008420) EFCAB10 (ENSBGRG00000008616) RINT1 (ENSBGRG00000008849) PUS7 (ENSBGRG00000008910) SRPK2 (ENSBGRG00000009007) ENSBGRG00000009238 ENSBGRG00000009259 #22 ENSBGRG00000009299 #22 KMT2E (ENSBGRG00000009356) ENSBGRG00000009439 ORC5 (ENSBGRG00000009573) RELN (ENSBGRG00000009814) SLC26A5 (ENSBGRG00000010133) PSMC2 (ENSBGRG00000010387) DNAJC2 (ENSBGRG00000010632) PMPCB (ENSBGRG00000010796) NAPEPLD (ENSBGRG00000011018) ENSBGRG00000011123 FBXL13 (ENSBGRG00000011795) LRRC17 (ENSBGRG00000013432) FAM185A (ENSBGRG00000013552) CCDC146 (ENSBGRG00000013877) Domestic yak MODERN SPECIES 23 ENSBGRG00000007454 ENSBGRG00000007323 ##14 ENSBGRG00000007347 NAMPT (ENSBGRG00000007410) ENSBGRG00000007872 ENSBGRG00000007936 ENSBGRG00000007980 CDHR3 (ENSBGRG00000008038) ATXN7L1 (ENSBGRG00000008420) EFCAB10 (ENSBGRG00000008616) RINT1 (ENSBGRG00000008849) PUS7 (ENSBGRG00000008910) SRPK2 (ENSBGRG00000009007) ENSBGRG00000009238 ENSBGRG00000009259 #22 ENSBGRG00000009299 #22 KMT2E (ENSBGRG00000009356) ENSBGRG00000009439 ORC5 (ENSBGRG00000009573) RELN (ENSBGRG00000009814) SLC26A5 (ENSBGRG00000010133) PSMC2 (ENSBGRG00000010387) DNAJC2 (ENSBGRG00000010632) PMPCB (ENSBGRG00000010796) NAPEPLD (ENSBGRG00000011018) ENSBGRG00000011123 FBXL13 (ENSBGRG00000011795) LRRC17 (ENSBGRG00000013432) FAM185A (ENSBGRG00000013552) CCDC146 (ENSBGRG00000013877) FGL2 (ENSBGRG00000014055) Domestic yak MODERN SPECIES 25 GUF1 (ENSBGRG00000001851) KCTD8 (ENSBGRG00000001931) GRXCR1 (ENSBGRG00000001939) ATP8A1 (ENSBGRG00000001965) ENSBGRG00000002087 ENSBGRG00000002096 SHISA3 (ENSBGRG00000002113) BEND4 (ENSBGRG00000002120) SLC30A9 (ENSBGRG00000002141) TMEM33 (ENSBGRG00000002211) PHOX2B (ENSBGRG00000002236) LIMCH1 (ENSBGRG00000002320) UCHL1 (ENSBGRG00000002608) ENSBGRG00000002669 ##14 APBB2 (ENSBGRG00000002693) ENSBGRG00000002737 #22 NSUN7 (ENSBGRG00000002761) RBM47 (ENSBGRG00000002798) CHRNA9 (ENSBGRG00000002828) RHOH (ENSBGRG00000002839) N4BP2 (ENSBGRG00000002859) ENSBGRG00000002884 PDS5A (ENSBGRG00000002901) UBE2K (ENSBGRG00000002976) ENSBGRG00000003067 SMIM14 (ENSBGRG00000003070) UGDH (ENSBGRG00000003085) LIAS (ENSBGRG00000003188) ENSBGRG00000003539 #18 KLB (ENSBGRG00000003576) RFC1 (ENSBGRG00000003610) Wild yak DUPLICATION Wild yak MODERN SPECIES 901 ENSBMUG00000022315 #19 SURF6 (ENSBMUG00000022330) #20 MED22 (ENSBMUG00000022342) #21 ENSBMUG00000022365 #22 SURF1 (ENSBMUG00000022409) #23 SURF2 (ENSBMUG00000022437) #24 SURF4 (ENSBMUG00000022452) #25 STKLD1 (ENSBMUG00000022473) #26 ENSBMUG00000000198 #28 ENSBMUG00000000248 #29 CACFD1 (ENSBMUG00000000339) #30 SLC2A6 (ENSBMUG00000000398) #31 MYMK (ENSBMUG00000000420) #32 ADAMTSL2 (ENSBMUG00000000460) #33 FAM163B (ENSBMUG00000000479) #34 DBH (ENSBMUG00000000502) #35 SARDH (ENSBMUG00000000658) #36 VAV2 (ENSBMUG00000000763) #37 Wild yak MODERN SPECIES 1290 ENSBMUG00000007977 ENSBMUG00000007994 PRKAR2B (ENSBMUG00000008012) PIK3CG (ENSBMUG00000008035) NAMPT (ENSBMUG00000008064) ENSBMUG00000008079 SYPL1 (ENSBMUG00000008094) CDHR3 (ENSBMUG00000008131) ATXN7L1 (ENSBMUG00000008158) EFCAB10 (ENSBMUG00000008197) RINT1 (ENSBMUG00000008230) PUS7 (ENSBMUG00000008264) SRPK2 (ENSBMUG00000008402) ENSBMUG00000008522 ENSBMUG00000008529 ENSBMUG00000008533 #22 KMT2E (ENSBMUG00000008563) LHFPL3 (ENSBMUG00000008594) ORC5 (ENSBMUG00000008608) Wild yak MODERN SPECIES 1350 ENSBMUG00000015744 ENSBMUG00000015784 UCHL1 (ENSBMUG00000015872) APBB2 (ENSBMUG00000015958) ENSBMUG00000015982 #22 NSUN7 (ENSBMUG00000016034) RBM47 (ENSBMUG00000016101) CHRNA9 (ENSBMUG00000016124) RHOH (ENSBMUG00000016136) N4BP2 (ENSBMUG00000016163) PDS5A (ENSBMUG00000016193) UBE2K (ENSBMUG00000016253) American bison DUPLICATION American bison MODERN SPECIES 2049 MED22 (ENSBBBG00000023316) ##21 ENSBBBG00000008410 #22 SURF1 (ENSBBBG00000023257) #23 ENSBBBG00000023246 #24 SURF4 (ENSBBBG00000023235) #25 American bison MODERN SPECIES 3311 YIPF7 (ENSBBBG00000004951) KCTD8 (ENSBBBG00000019216) GRXCR1 (ENSBBBG00000004958) ENSBBBG00000019226 ATP8A1 (ENSBBBG00000005012) ENSBBBG00000007510 SHISA3 (ENSBBBG00000019329) BEND4 (ENSBBBG00000019344) ENSBBBG00000008606 ENSBBBG00000005070 SLC30A9 (ENSBBBG00000005105) TMEM33 (ENSBBBG00000005136) ENSBBBG00000005144 LIMCH1 (ENSBBBG00000019691) UCHL1 (ENSBBBG00000019749) ENSBBBG00000007915 #22 APBB2 (ENSBBBG00000005383) NSUN7 (ENSBBBG00000019942) RBM47 (ENSBBBG00000005396) CHRNA9 (ENSBBBG00000019966) RHOH (ENSBBBG00000019980) N4BP2 (ENSBBBG00000019991) Caprinae ANCESTRAL SPECIES 27 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Goat DUPLICATION Goat MODERN SPECIES 2 ENSCHIG00000017713 DNLZ (ENSCHIG00000019744) CARD9 (ENSCHIG00000013779) #7 SNAPC4 (ENSCHIG00000013796) #8 ENTR1 (ENSCHIG00000018825) #9 PMPCA (ENSCHIG00000013065) #10 INPP5E (ENSCHIG00000004726) #11 SEC16A (ENSCHIG00000020286) #12 NOTCH1 (ENSCHIG00000021033) #13 EGFL7 (ENSCHIG00000023457) #15 AGPAT2 (ENSCHIG00000014858) #16 DIPK1B (ENSCHIG00000014246) #17 ENSCHIG00000016256 #19 SURF6 (ENSCHIG00000025220) #20 MED22 (ENSCHIG00000025808) #21 ENSCHIG00000003945 #22 SURF1 (ENSCHIG00000005972) #23 SURF2 (ENSCHIG00000022633) #24 SURF4 (ENSCHIG00000016835) #25 REXO4 (ENSCHIG00000009517) #27 ADAMTS13 (ENSCHIG00000025823) #28 CACFD1 (ENSCHIG00000022694) #30 SLC2A6 (ENSCHIG00000022381) #31 MYMK (ENSCHIG00000025700) #32 ADAMTSL2 (ENSCHIG00000010630) #33 FAM163B (ENSCHIG00000017935) #34 DBH (ENSCHIG00000015269) #35 SARDH (ENSCHIG00000017015) #36 VAV2 (ENSCHIG00000021915) #37 BRD3 (ENSCHIG00000007578) WDR5 (ENSCHIG00000023578) Goat MODERN SPECIES 26 FBN2 (ENSCHIG00000013312) SLC12A2 (ENSCHIG00000027061) CCDC192 (ENSCHIG00000016359) CTXN3 (ENSCHIG00000007407) PRRC1 (ENSCHIG00000026659) MEGF10 (ENSCHIG00000025358) C5orf63 (ENSCHIG00000023331) ENSCHIG00000010842 MARCHF3 (ENSCHIG00000024023) ENSCHIG00000008661 LMNB1 (ENSCHIG00000013615) TEX43 (ENSCHIG00000019799) PHAX (ENSCHIG00000019187) ALDH7A1 (ENSCHIG00000008246) GRAMD2B (ENSCHIG00000025691) ENSCHIG00000010010 #22 ZNF608 (ENSCHIG00000026647) CSNK1G3 (ENSCHIG00000025226) ENSCHIG00000009675 CEP120 (ENSCHIG00000011238) PRDM6 (ENSCHIG00000025154) ENSCHIG00000011061 PPIC (ENSCHIG00000015045) ENSCHIG00000007585 SNX2 (ENSCHIG00000007248) SNCAIP (ENSCHIG00000013060) ENSCHIG00000008598 LOX (ENSCHIG00000017030) SRFBP1 (ENSCHIG00000019724) FTMT (ENSCHIG00000004660) ENSCHIG00000011744 Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020004267 CARD9 (ENSOARG00020004236) #7 SNAPC4 (ENSOARG00020003067) #8 ENTR1 (ENSOARG00020002831) #9 PMPCA (ENSOARG00020002792) #10 INPP5E (ENSOARG00020002704) #11 NOTCH1 (ENSOARG00020002622) #13 ENSOARG00020002602 ENSOARG00020002591 EGFL7 (ENSOARG00020002558) #15 ENSOARG00020002513 #16 DIPK1B (ENSOARG00020002483) #17 ENSOARG00020002455 #19 SURF6 (ENSOARG00020002448) #20 MED22 (ENSOARG00020002441) #21 ENSOARG00020002423 #22 SURF1 (ENSOARG00020002412) #23 SURF2 (ENSOARG00020002406) #24 SURF4 (ENSOARG00020002392) #25 STKLD1 (ENSOARG00020002366) #26 ENSOARG00020002341 #28 ENSOARG00020002327 #29 CACFD1 (ENSOARG00020002308) #30 SLC2A6 (ENSOARG00020002270) #31 MYMK (ENSOARG00020002247) #32 ADAMTSL2 (ENSOARG00020002211) #33 FAM163B (ENSOARG00020002181) #34 DBH (ENSOARG00020002153) #35 SARDH (ENSOARG00020001993) #36 VAV2 (ENSOARG00020001789) #37 ENSOARG00020001755 Siberian musk deer MODERN SPECIES 1178 ENSMMSG00000017799 GPSM1 (ENSMMSG00000017853) DNLZ (ENSMMSG00000018005) CARD9 (ENSMMSG00000018040) #7 SNAPC4 (ENSMMSG00000018179) #8 ENTR1 (ENSMMSG00000018277) #9 PMPCA (ENSMMSG00000018461) #10 INPP5E (ENSMMSG00000018533) #11 SEC16A (ENSMMSG00000018596) #12 NOTCH1 (ENSMMSG00000018769) #13 EGFL7 (ENSMMSG00000018878) #15 AGPAT2 (ENSMMSG00000018937) #16 DIPK1B (ENSMMSG00000018999) #17 SURF6 (ENSMMSG00000019063) #20 MED22 (ENSMMSG00000019115) #21 ENSMMSG00000017005 #22 ENSMMSG00000017048 #23 SURF2 (ENSMMSG00000017092) #24 SURF4 (ENSMMSG00000017110) #25 REXO4 (ENSMMSG00000017141) #27 ENSMMSG00000017170 #28 ENSMMSG00000017237 #29 CACFD1 (ENSMMSG00000017256) #30 SLC2A6 (ENSMMSG00000017296) #31 MYMK (ENSMMSG00000017340) #32 ADAMTSL2 (ENSMMSG00000017376) #33 FAM163B (ENSMMSG00000017414) #34 DBH (ENSMMSG00000017445) #35 SARDH (ENSMMSG00000017534) #36 VAV2 (ENSMMSG00000017731) #37 ENSMMSG00000018028 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES COPB1 (ENSCHYG00000000002) PSMA1 (ENSCHYG00000018665) ENSCHYG00000018606 PDE3B (ENSCHYG00000018075) ENSCHYG00000018022 CYP2R1 (ENSCHYG00000017908) ENSCHYG00000017748 ENSCHYG00000017694 ENSCHYG00000017642 ENSCHYG00000017547 INSC (ENSCHYG00000017107) ENSCHYG00000017074 SOX6 (ENSCHYG00000016309) C11orf58 (ENSCHYG00000016095) PLEKHA7 (ENSCHYG00000015374) ENSCHYG00000015259 #22 PIK3C2A (ENSCHYG00000014721) NUCB2 (ENSCHYG00000014573) ENSCHYG00000014538 KCNJ11 (ENSCHYG00000014523) ABCC8 (ENSCHYG00000013838) USH1C (ENSCHYG00000013383) OTOG (ENSCHYG00000013158) MYOD1 (ENSCHYG00000013095) KCNC1 (ENSCHYG00000013038) SERGEF (ENSCHYG00000012902) TPH1 (ENSCHYG00000012793) SAAL1 (ENSCHYG00000012719) ENSCHYG00000012579 ZNF202 (ENSCHYG00000012502) SCN3B (ENSCHYG00000012415) Yarkand deer MODERN SPECIES 2 ENSCHYG00000006716 GPSM1 (ENSCHYG00000006855) CARD9 (ENSCHYG00000006923) #7 SNAPC4 (ENSCHYG00000007022) #8 ENTR1 (ENSCHYG00000007198) #9 PMPCA (ENSCHYG00000007436) #10 INPP5E (ENSCHYG00000007535) #11 SEC16A (ENSCHYG00000007686) #12 NOTCH1 (ENSCHYG00000008626) #13 ENSCHYG00000008811 #15 AGPAT2 (ENSCHYG00000009123) #16 DIPK1B (ENSCHYG00000009252) #17 ENSCHYG00000009352 #19 SURF6 (ENSCHYG00000009401) #20 MED22 (ENSCHYG00000009429) #21 ENSCHYG00000009488 #22 SURF1 (ENSCHYG00000009643) #23 SURF2 (ENSCHYG00000009850) #24 SURF4 (ENSCHYG00000009955) #25 ENSCHYG00000010174 REXO4 (ENSCHYG00000010246) #27 ADAMTS13 (ENSCHYG00000010317) #28 CACFD1 (ENSCHYG00000010507) #30 SLC2A6 (ENSCHYG00000010600) #31 MYMK (ENSCHYG00000010712) #32 ADAMTSL2 (ENSCHYG00000010768) #33 ENSCHYG00000011166 #34 DBH (ENSCHYG00000011205) #35 SARDH (ENSCHYG00000011277) #36 VAV2 (ENSCHYG00000011531) #37 ENSCHYG00000012265 Cetacea ANCESTRAL SPECIES 9 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##19 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00950000182858.A.a.a #19 ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Odontoceti ANCESTRAL SPECIES 8 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379.e.a #28 ENSGT00940000158379.e.b #28 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Sperm whale MODERN SPECIES 501 MED22 (ENSPCTG00005020972) #21 RPL7A (ENSPCTG00005020995) #22 SURF1 (ENSPCTG00005021027) #23 SURF2 (ENSPCTG00005021040) #24 SURF4 (ENSPCTG00005021058) #25 Odontoceti_a ANCESTRAL SPECIES 19 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379.e.a #28 ENSGT00940000158379.e.b #28 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379.e.a #28 ENSGT00940000158379.e.b #28 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Vaquita MODERN SPECIES 17 GPSM1 (ENSPSNG00000003585) ENSPSNG00000003644 QSOX2 (ENSPSNG00000003669) LHX3 (ENSPSNG00000003704) TMEM250 (ENSPSNG00000003733) NACC2 (ENSPSNG00000003746) UBAC1 (ENSPSNG00000003773) CAMSAP1 (ENSPSNG00000003852) ENSPSNG00000003959 KCNT1 (ENSPSNG00000004784) ENSPSNG00000006678 ENSPSNG00000006708 ENSPSNG00000006760 SURF6 (ENSPSNG00000006826) #20 MED22 (ENSPSNG00000006857) #21 ENSPSNG00000006905 #22 SURF1 (ENSPSNG00000007027) #23 SURF2 (ENSPSNG00000007081) #24 ENSPSNG00000007113 #25 ENSPSNG00000007227 #27 ADAMTS13 (ENSPSNG00000007316) #28 CACFD1 (ENSPSNG00000007556) #30 SLC2A6 (ENSPSNG00000007615) #31 MYMK (ENSPSNG00000007679) #32 ADAMTSL2 (ENSPSNG00000007726) #33 FAM163B (ENSPSNG00000007849) #34 DBH (ENSPSNG00000007879) #35 SARDH (ENSPSNG00000007978) #36 VAV2 (ENSPSNG00000008237) #37 BRD3 (ENSPSNG00000008397) WDR5 (ENSPSNG00000008438) Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000008220 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #20 ENSGT00390000004339.f #21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379.e.a #28 ENSGT00940000158379.e.b #28 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Narwhal MODERN SPECIES 312 GPSM1 (ENSMMNG00015017768) ENSMMNG00015017632 QSOX2 (ENSMMNG00015017566) LHX3 (ENSMMNG00015017493) TMEM250 (ENSMMNG00015017465) NACC2 (ENSMMNG00015017441) UBAC1 (ENSMMNG00015017402) CAMSAP1 (ENSMMNG00015017305) KCNT1 (ENSMMNG00015015607) ENSMMNG00015015234 ENSMMNG00015015219 ENSMMNG00015015203 SURF6 (ENSMMNG00015015192) #20 MED22 (ENSMMNG00015015176) #21 ENSMMNG00015015148 ENSMMNG00015015131 #22 SURF1 (ENSMMNG00015015113) #23 SURF2 (ENSMMNG00015015101) #24 ENSMMNG00015015083 #25 STKLD1 (ENSMMNG00015015057) #26 ENSMMNG00015015033 #27 ADAMTS13 (ENSMMNG00015014897) #28 SLC2A6 (ENSMMNG00015014833) #31 MYMK (ENSMMNG00015014813) #32 ADAMTSL2 (ENSMMNG00015014791) #33 FAM163B (ENSMMNG00015014778) #34 DBH (ENSMMNG00015014752) #35 SARDH (ENSMMNG00015014691) #36 VAV2 (ENSMMNG00015014535) #37 ENSMMNG00015014467 BRD3 (ENSMMNG00015014410) Camelidae ANCESTRAL SPECIES 65 ENSGT00940000154667.a ENSGT00390000008220.c ENSGT00940000160570 #7 ENSGT00940000160404 #8 ENSGT00390000000560 #9 ENSGT00940000156724 #10 ENSGT00940000158199 #11 ENSGT00940000159324 #12 ENSGT00940000157157.b #13 ENSGT00940000160015 #15 ENSGT00390000008726.h.a #16 ENSGT00390000006452.b.a #17 ENSGT00950000182858.A.a.a #19 ENSGT00940000170286 ENSGT00390000004339.e.b ##21 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #23 ENSGT00390000016800 #24 ENSGT00530000064123 #25 ENSGT00390000018038 #26 ENSGT00940000159607 #27 ENSGT00940000158379 #28 ENSGT00940000178229 #29 ENSGT00390000000529 #30 ENSGT00940000159976 #31 ENSGT00940000160710 #32 ENSGT00940000159447 #33 ENSGT00940000159387 #34 ENSGT00530000063085.B #35 ENSGT00940000157589 #36 ENSGT00940000159718 #37 Arabian camel MODERN SPECIES 30 GPSM1 (ENSCDRG00005001642) ENSCDRG00005001626 CARD9 (ENSCDRG00005001608) #7 SNAPC4 (ENSCDRG00005001573) #8 ENTR1 (ENSCDRG00005001472) #9 PMPCA (ENSCDRG00005001401) #10 INPP5E (ENSCDRG00005001361) #11 SEC16A (ENSCDRG00005001240) #12 NOTCH1 (ENSCDRG00005001130) #13 ENSCDRG00005001079 #15 AGPAT2 (ENSCDRG00005001034) #16 DIPK1B (ENSCDRG00005001006) #17 ENSCDRG00005000956 #19 ENSCDRG00005000937 ENSCDRG00005000916 ##21 ENSCDRG00005000860 #22 SURF1 (ENSCDRG00005000843) #23 ENSCDRG00005000827 SURF2 (ENSCDRG00005000808) #24 ENSCDRG00005000794 #25 STKLD1 (ENSCDRG00005000727) #26 REXO4 (ENSCDRG00005000665) #27 ENSCDRG00005000643 #28 ENSCDRG00005000622 #29 CACFD1 (ENSCDRG00005000601) #30 SLC2A6 (ENSCDRG00005000573) #31 MYMK (ENSCDRG00005000556) #32 ADAMTSL2 (ENSCDRG00005000516) #33 FAM163B (ENSCDRG00005000485) #34 DBH (ENSCDRG00005000427) #35 SARDH (ENSCDRG00005000337) #36