Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00390000014818 ENSGT00940000153294.n ##22 ENSGT00530000064194 #24 ENSGT00940000153294.m.a ##22 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00850000133605 ENSGT01050000244868.a.a.a.b.b ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.a ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00940000153294.m.a.c.b ##22 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Primates ANCESTRAL SPECIES 9 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.b ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Haplorrhini ANCESTRAL SPECIES 9 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.b ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Simiiformes ANCESTRAL SPECIES 11 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.b.p ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 13 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00940000153294.m.a.c.b.p ##22 ENSGT00390000014818 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00910000147066 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00910000147066 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.f #22 Macaca ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.f #22 Macaca_a ANCESTRAL SPECIES 10 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00940000164691.a.a.a.a.b.a.b #21 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00940000153294.m.b.s.f #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT00940000153385.b.a.a #37 Rhesus MODERN SPECIES 6 DDX31 (ENSMMUG00000004590) #7 GTF3C4 (ENSMMUG00000009915) #8 AK8 (ENSMMUG00000009916) #9 SPACA9 (ENSMMUG00000021158) #10 TSC1 (ENSMMUG00000009918) #11 GFI1B (ENSMMUG00000005948) #12 GTF3C5 (ENSMMUG00000001267) #13 CEL (ENSMMUG00000001272) #14 RALGDS (ENSMMUG00000015274) #15 ENSMMUG00000054901 #16 ENSMMUG00000050399 #17 ABO (ENSMMUG00000015100) #18 WDR5 (ENSMMUG00000014159) #19 ENSMMUG00000065260 #20 ENSMMUG00000065261 #21 RPL7A (ENSMMUG00000022341) #22 SURF6 (ENSMMUG00000022339) #23 SURF1 (ENSMMUG00000022344) #24 SURF2 (ENSMMUG00000022346) #25 SURF4 (ENSMMUG00000022348) #26 STKLD1 (ENSMMUG00000000934) #27 REXO4 (ENSMMUG00000000935) #28 ADAMTS13 (ENSMMUG00000000937) #29 SLC2A6 (ENSMMUG00000010981) #30 MYMK (ENSMMUG00000017202) #31 ADAMTSL2 (ENSMMUG00000017203) #32 FAM163B (ENSMMUG00000040914) #33 DBH (ENSMMUG00000017207) #34 SARDH (ENSMMUG00000017210) #35 VAV2 (ENSMMUG00000017214) #36 BRD3 (ENSMMUG00000005463) #37 Crab-eating macaque MODERN SPECIES 14 SLC17A4 (ENSMFAG00000036410) ENSMFAG00000060597 H2BC1 (ENSMFAG00000051470) SCGN (ENSMFAG00000000166) CARMIL1 (ENSMFAG00000040204) ENSMFAG00000035592 RIPOR2 (ENSMFAG00000045840) ARMH2 (ENSMFAG00000000821) GMNN (ENSMFAG00000031787) C6orf62 (ENSMFAG00000039257) ENSMFAG00000064618 ENSMFAG00000035886 ENSMFAG00000064382 TDP2 (ENSMFAG00000045296) KIAA0319 (ENSMFAG00000041252) ENSMFAG00000063461 #22 ALDH5A1 (ENSMFAG00000044209) GPLD1 (ENSMFAG00000045533) MRS2 (ENSMFAG00000038058) ENSMFAG00000050294 ENSMFAG00000017743 DCDC2 (ENSMFAG00000001295) NRSN1 (ENSMFAG00000036989) ENSMFAG00000059419 ENSMFAG00000052064 ENSMFAG00000059385 PRL (ENSMFAG00000000707) ENSMFAG00000052589 ENSMFAG00000053681 ENSMFAG00000060959 ENSMFAG00000052080 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.a ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000153524.b.a.a.k.a ENSGT00940000158251 ENSGT00940000163898 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT00940000153294.m.b.s.f #22 ENSGT00390000014818.g.b.a.a.a.b.b ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 ENSGT00940000157713 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 19 RASSF9 (ENSPANG00000023605) ENSPANG00000018370 ENSPANG00000044234 ENSPANG00000049251 ALX1 (ENSPANG00000005930) ENSPANG00000003192 TSPAN19 (ENSPANG00000016556) LRRIQ1 (ENSPANG00000020393) SLC6A15 (ENSPANG00000011238) ENSPANG00000005733 ENSPANG00000049628 TMTC2 (ENSPANG00000008622) ENSPANG00000032275 METTL25 (ENSPANG00000033969) CCDC59 (ENSPANG00000023011) ENSPANG00000049322 #22 ENSPANG00000042647 ENSPANG00000035488 PPFIA2 (ENSPANG00000019704) ACSS3 (ENSPANG00000019084) LIN7A (ENSPANG00000005931) MYF5 (ENSPANG00000020394) MYF6 (ENSPANG00000044306) ENSPANG00000005319 PTPRQ (ENSPANG00000014456) OTOGL (ENSPANG00000012907) ENSPANG00000047805 PPP1R12A (ENSPANG00000026354) PAWR (ENSPANG00000009557) SYT1 (ENSPANG00000009048) ENSPANG00000040020 Olive baboon MODERN SPECIES 14 NAMPT (ENSPANG00000025368) SYPL1 (ENSPANG00000015695) ENSPANG00000045478 ENSPANG00000050232 ATXN7L1 (ENSPANG00000009777) ENSPANG00000049053 EFCAB10 (ENSPANG00000021182) RINT1 (ENSPANG00000019820) PUS7 (ENSPANG00000014230) SRPK2 (ENSPANG00000026449) KMT2E (ENSPANG00000005214) LHFPL3 (ENSPANG00000030052) ORC5 (ENSPANG00000007067) ENSPANG00000037310 RELN (ENSPANG00000009099) ENSPANG00000034951 #22 ENSPANG00000043672 SLC26A5 (ENSPANG00000012991) PSMC2 (ENSPANG00000021273) DNAJC2 (ENSPANG00000019301) PMPCB (ENSPANG00000011795) NAPEPLD (ENSPANG00000006176) ARMC10 (ENSPANG00000000473) FBXL13 (ENSPANG00000018070) LRRC17 (ENSPANG00000005425) FAM185A (ENSPANG00000007609) CCDC146 (ENSPANG00000020437) FGL2 (ENSPANG00000019822) GSAP (ENSPANG00000009852) ENSPANG00000045115 PTPN12 (ENSPANG00000000974) Cercopithecinae_d ANCESTRAL SPECIES 3 ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000153524.b.a.a.k.a ENSGT00940000158251 ENSGT00940000163898 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT00940000153294.m.b.s.f #22 ENSGT00390000014818.g.b.a.a.a.b.a ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000155142.i.a.a ENSGT00390000003133.i.a ENSGT00940000163914.c.a ENSGT01100000263748 Sooty mangabey MODERN SPECIES 582 MGAT4C (ENSCATG00000019157) NTS (ENSCATG00000039653) RASSF9 (ENSCATG00000038528) ENSCATG00000038524 ALX1 (ENSCATG00000041762) LRRIQ1 (ENSCATG00000037866) TSPAN19 (ENSCATG00000034141) SLC6A15 (ENSCATG00000041025) ENSCATG00000022828 TMTC2 (ENSCATG00000040764) METTL25 (ENSCATG00000044852) CCDC59 (ENSCATG00000044760) ENSCATG00000034351 #22 ENSCATG00000031323 ENSCATG00000038856 PPFIA2 (ENSCATG00000040747) ACSS3 (ENSCATG00000030914) LIN7A (ENSCATG00000029939) MYF5 (ENSCATG00000042162) MYF6 (ENSCATG00000029151) PTPRQ (ENSCATG00000039610) OTOGL (ENSCATG00000038125) PPP1R12A (ENSCATG00000038278) PAWR (ENSCATG00000034935) SYT1 (ENSCATG00000033541) ENSCATG00000044466 ENSCATG00000040529 ENSCATG00000017337 Drill DUPLICATION Drill MODERN SPECIES 1667 GDF11 (ENSMLEG00000032721) CD63 (ENSMLEG00000037224) RDH5 (ENSMLEG00000028776) ITGA7 (ENSMLEG00000002509) METTL7B (ENSMLEG00000033453) ENSMLEG00000031889 ENSMLEG00000032453 OR10P1 (ENSMLEG00000021983) OR6C4 (ENSMLEG00000021441) OR6C2 (ENSMLEG00000027980) OR6C65 (ENSMLEG00000036650) ENSMLEG00000043588 #22 OR6C75 (ENSMLEG00000022612) OR6C3 (ENSMLEG00000036806) OR6C74 (ENSMLEG00000017829) OR10A7 (ENSMLEG00000043713) ENSMLEG00000027776 OR9K2 (ENSMLEG00000027603) ENSMLEG00000003880 NEUROD4 (ENSMLEG00000027380) TESPA1 (ENSMLEG00000039181) ENSMLEG00000043278 Drill MODERN SPECIES 328 ENSMLEG00000036838 #22 ENSMLEG00000027098 ENSMLEG00000026917 ENSMLEG00000029879 CDKN2B (ENSMLEG00000037377) CDKN2A (ENSMLEG00000033190) MTAP (ENSMLEG00000032984) IFNE (ENSMLEG00000040652) ENSMLEG00000030280 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Macaca ANCESTRAL SPECIES 10 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Pig-tailed macaque MODERN SPECIES 490 SH3RF3 (ENSMNEG00000033434) ENSMNEG00000030947 EDAR (ENSMNEG00000042159) CCDC138 (ENSMNEG00000005767) RANBP2 (ENSMNEG00000043706) ENSMNEG00000024372 ENSMNEG00000003332 GCC2 (ENSMNEG00000022989) ENSMNEG00000032891 SULT1C4 (ENSMNEG00000040683) SULT1C2 (ENSMNEG00000039439) SULT1C3 (ENSMNEG00000038187) SURF6 (ENSMNEG00000033787) #23 MED22 (ENSMNEG00000031626) ENSMNEG00000028959 ENSMNEG00000039240 ##22 SURF1 (ENSMNEG00000044047) #24 SURF2 (ENSMNEG00000039327) #25 SURF4 (ENSMNEG00000001598) #26 STKLD1 (ENSMNEG00000029920) #27 REXO4 (ENSMNEG00000031604) #28 ADAMTS13 (ENSMNEG00000034336) #29 CACFD1 (ENSMNEG00000028887) SLC2A6 (ENSMNEG00000036657) #30 MYMK (ENSMNEG00000042261) #31 ADAMTSL2 (ENSMNEG00000037641) #32 FAM163B (ENSMNEG00000033369) #33 DBH (ENSMNEG00000035550) #34 SARDH (ENSMNEG00000002204) #35 VAV2 (ENSMNEG00000035639) #36 BRD3OS (ENSMNEG00000019590) Macaca_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.e.a ##22 Crab-eating macaque MODERN SPECIES 4 TIA1 (ENSMFAG00000045951) C2orf42 (ENSMFAG00000046692) PCBP1 (ENSMFAG00000055458) ENSMFAG00000036184 ASPRV1 (ENSMFAG00000027875) ENSMFAG00000061563 MXD1 (ENSMFAG00000043046) ENSMFAG00000040656 GMCL1 (ENSMFAG00000003922) ANXA4 (ENSMFAG00000033651) AAK1 (ENSMFAG00000032641) ENSMFAG00000063272 NFU1 (ENSMFAG00000033270) GFPT1 (ENSMFAG00000003721) ANTXR1 (ENSMFAG00000044025) ENSMFAG00000047324 ##22 GKN1 (ENSMFAG00000032957) GKN2 (ENSMFAG00000044673) BMP10 (ENSMFAG00000038780) ARHGAP25 (ENSMFAG00000001418) PROKR1 (ENSMFAG00000043932) APLF (ENSMFAG00000045051) FBXO48 (ENSMFAG00000038551) PLEK (ENSMFAG00000054603) CNRIP1 (ENSMFAG00000035167) PPP3R1 (ENSMFAG00000031560) PNO1 (ENSMFAG00000043544) ENSMFAG00000064848 DNAAF10 (ENSMFAG00000042360) ENSMFAG00000034261 ENSMFAG00000056299 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Olive baboon MODERN SPECIES 4 DDX31 (ENSPANG00000025987) #7 GTF3C4 (ENSPANG00000026029) #8 AK8 (ENSPANG00000026030) #9 SPACA9 (ENSPANG00000026038) #10 TSC1 (ENSPANG00000026037) #11 GFI1B (ENSPANG00000024216) #12 GTF3C5 (ENSPANG00000021827) #13 ENSPANG00000046372 RALGDS (ENSPANG00000018172) #15 GBGT1 (ENSPANG00000034220) ##18 ENSPANG00000015132 ENSPANG00000026111 ABO (ENSPANG00000003775) #18 SURF6 (ENSPANG00000026036) #23 MED22 (ENSPANG00000046839) ENSPANG00000026035 ##22 ENSPANG00000026034 #24 SURF2 (ENSPANG00000026033) #25 SURF4 (ENSPANG00000026032) #26 STKLD1 (ENSPANG00000026031) #27 REXO4 (ENSPANG00000026040) #28 ADAMTS13 (ENSPANG00000026041) #29 ENSPANG00000026049 SLC2A6 (ENSPANG00000026048) #30 MYMK (ENSPANG00000026047) #31 ADAMTSL2 (ENSPANG00000026046) #32 FAM163B (ENSPANG00000026045) #33 ENSPANG00000026044 #34 ENSPANG00000051385 MRPS2 (ENSPANG00000045207) PIERCE1 (ENSPANG00000032034) Cercopithecinae_d ANCESTRAL SPECIES 59 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Sooty mangabey MODERN SPECIES 572 SURF6 (ENSCATG00000042004) #23 MED22 (ENSCATG00000043740) ENSCATG00000037024 ENSCATG00000037203 ##22 SURF1 (ENSCATG00000042888) #24 SURF2 (ENSCATG00000044351) #25 SURF4 (ENSCATG00000034398) #26 STKLD1 (ENSCATG00000045287) #27 REXO4 (ENSCATG00000028646) #28 ADAMTS13 (ENSCATG00000045040) #29 CACFD1 (ENSCATG00000037924) SLC2A6 (ENSCATG00000044478) #30 MYMK (ENSCATG00000040737) #31 ADAMTSL2 (ENSCATG00000041168) #32 FAM163B (ENSCATG00000029804) #33 DBH (ENSCATG00000016222) #34 SARDH (ENSCATG00000032494) #35 VAV2 (ENSCATG00000036350) #36 BRD3OS (ENSCATG00000022029) Drill MODERN SPECIES 237 SURF6 (ENSMLEG00000028750) #23 ENSMLEG00000030500 MED22 (ENSMLEG00000037247) ENSMLEG00000025192 ##22 SURF1 (ENSMLEG00000031073) #24 SURF2 (ENSMLEG00000042010) #25 SURF4 (ENSMLEG00000029570) #26 STKLD1 (ENSMLEG00000041760) #27 REXO4 (ENSMLEG00000037716) #28 ADAMTS13 (ENSMLEG00000043762) #29 CACFD1 (ENSMLEG00000036516) SLC2A6 (ENSMLEG00000035419) #30 MYMK (ENSMLEG00000011155) #31 ADAMTSL2 (ENSMLEG00000028870) #32 FAM163B (ENSMLEG00000027334) #33 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.e.b ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.e.b ##22 Cercopithecinae_d ANCESTRAL SPECIES 149 ENSGT00390000006225 ENSGT00940000160618 ENSGT00390000006925 ENSGT00390000010354 ENSGT00910000146971 ENSGT00940000157211 ENSGT00940000153095.g.b.a.a.a.a ENSGT00940000156332 ENSGT00940000163000 ENSGT00940000155984 ENSGT00910000147009 ENSGT00940000159862 ENSGT00940000159213 ENSGT00940000159158 ENSGT00940000154817.b.b.b ENSGT00940000153294.m.b.s.e.b ##22 ENSGT00390000014818.g.b.a.b ENSGT00390000011515.d ENSGT00940000153568.B ENSGT00940000164023 ENSGT00940000160532 Sooty mangabey MODERN SPECIES 129 SCTR (ENSCATG00000035610) ENSCATG00000032201 CFAP221 (ENSCATG00000020702) ENSCATG00000014934 ENSCATG00000012333 PTPN4 (ENSCATG00000030920) ENSCATG00000035581 EPB41L5 (ENSCATG00000040081) ENSCATG00000036400 RALB (ENSCATG00000039216) ENSCATG00000006617 INHBB (ENSCATG00000010576) GLI2 (ENSCATG00000034671) TFCP2L1 (ENSCATG00000044361) CLASP1 (ENSCATG00000039063) ENSCATG00000043420 ##22 ENSCATG00000043436 NIFK (ENSCATG00000015239) TSN (ENSCATG00000032155) ENSCATG00000032734 Drill MODERN SPECIES 871 C2orf76 (ENSMLEG00000039378) DBI (ENSMLEG00000001896) TMEM37 (ENSMLEG00000033060) SCTR (ENSMLEG00000029227) CFAP221 (ENSMLEG00000042134) ENSMLEG00000041704 PTPN4 (ENSMLEG00000040178) ENSMLEG00000039838 EPB41L5 (ENSMLEG00000032344) ENSMLEG00000027991 RALB (ENSMLEG00000008823) ENSMLEG00000042162 GLI2 (ENSMLEG00000000952) TFCP2L1 (ENSMLEG00000019949) CLASP1 (ENSMLEG00000044177) ENSMLEG00000017424 ##22 NIFK (ENSMLEG00000043516) TSN (ENSMLEG00000038656) ENSMLEG00000005825 CNTNAP5 (ENSMLEG00000030564) Macaca ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.e.b ##22 Macaca_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.s.e.b ##22 Crab-eating macaque MODERN SPECIES 3 ENSMFAG00000002195 TMEM37 (ENSMFAG00000028075) ENSMFAG00000051758 SCTR (ENSMFAG00000003037) CFAP221 (ENSMFAG00000026339) TMEM177 (ENSMFAG00000049249) ENSMFAG00000044614 PTPN4 (ENSMFAG00000037071) EPB41L5 (ENSMFAG00000000388) TMEM185B (ENSMFAG00000016061) ENSMFAG00000060262 RALB (ENSMFAG00000038532) INHBB (ENSMFAG00000043042) GLI2 (ENSMFAG00000003477) TFCP2L1 (ENSMFAG00000013698) ENSMFAG00000049923 ##22 CLASP1 (ENSMFAG00000032753) NIFK (ENSMFAG00000031270) TSN (ENSMFAG00000044217) CNTNAP5 (ENSMFAG00000042003) ENSMFAG00000003980 TEX51 (ENSMFAG00000000535) BIN1 (ENSMFAG00000031946) CYP27C1 (ENSMFAG00000041958) ERCC3 (ENSMFAG00000003370) MAP3K2 (ENSMFAG00000037837) ENSMFAG00000051897 ENSMFAG00000058484 PROC (ENSMFAG00000044923) IWS1 (ENSMFAG00000016975) ENSMFAG00000062671 Rhinopithecus ANCESTRAL SPECIES 2 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00910000147066 ENSGT00390000004339 ENSGT00390000014818.h ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Black snub-nosed monkey MODERN SPECIES 130 DDX31 (ENSRBIG00000042353) #7 GTF3C4 (ENSRBIG00000026348) #8 AK8 (ENSRBIG00000031522) #9 SPACA9 (ENSRBIG00000035119) #10 ENSRBIG00000030505 TSC1 (ENSRBIG00000035693) #11 GFI1B (ENSRBIG00000032113) #12 GTF3C5 (ENSRBIG00000031213) #13 CEL (ENSRBIG00000011705) #14 RALGDS (ENSRBIG00000040046) #15 GBGT1 (ENSRBIG00000032070) ##18 ABO (ENSRBIG00000041187) #18 SURF6 (ENSRBIG00000028268) #23 MED22 (ENSRBIG00000012741) ENSRBIG00000042922 ENSRBIG00000029545 #22 SURF1 (ENSRBIG00000039669) #24 SURF2 (ENSRBIG00000037030) #25 SURF4 (ENSRBIG00000044124) #26 STKLD1 (ENSRBIG00000037451) #27 REXO4 (ENSRBIG00000037515) #28 ADAMTS13 (ENSRBIG00000040768) #29 CACFD1 (ENSRBIG00000040728) SLC2A6 (ENSRBIG00000030115) #30 MYMK (ENSRBIG00000037991) #31 ADAMTSL2 (ENSRBIG00000035951) #32 FAM163B (ENSRBIG00000042372) #33 DBH (ENSRBIG00000039871) #34 SARDH (ENSRBIG00000039189) #35 VAV2 (ENSRBIG00000006768) #36 BRD3OS (ENSRBIG00000009048) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1695 DDX31 (ENSRROG00000044427) #7 GTF3C4 (ENSRROG00000011474) #8 AK8 (ENSRROG00000007267) #9 SPACA9 (ENSRROG00000035888) #10 TSC1 (ENSRROG00000040517) #11 GFI1B (ENSRROG00000032600) #12 GTF3C5 (ENSRROG00000038857) #13 CEL (ENSRROG00000043926) #14 RALGDS (ENSRROG00000039481) #15 ENSRROG00000035030 ##18 ABO (ENSRROG00000041717) #18 SURF6 (ENSRROG00000012667) #23 ENSRROG00000045021 MED22 (ENSRROG00000034974) ENSRROG00000031476 ENSRROG00000033341 #22 SURF1 (ENSRROG00000041375) #24 SURF2 (ENSRROG00000028551) #25 SURF4 (ENSRROG00000037683) #26 STKLD1 (ENSRROG00000028757) #27 REXO4 (ENSRROG00000028864) #28 ADAMTS13 (ENSRROG00000040887) #29 CACFD1 (ENSRROG00000013285) SLC2A6 (ENSRROG00000038890) #30 MYMK (ENSRROG00000034647) #31 ADAMTSL2 (ENSRROG00000037111) #32 FAM163B (ENSRROG00000042558) #33 DBH (ENSRROG00000044901) #34 SARDH (ENSRROG00000036454) #35 VAV2 (ENSRROG00000031220) #36 BRD3OS (ENSRROG00000003747) Golden snub-nosed monkey MODERN SPECIES 1460 CTPS2 (ENSRROG00000008962) S100G (ENSRROG00000038305) ENSRROG00000022850 #22 SYAP1 (ENSRROG00000044395) TXLNG (ENSRROG00000040582) ENSRROG00000044936 RBBP7 (ENSRROG00000041791) REPS2 (ENSRROG00000026327) Golden snub-nosed monkey MODERN SPECIES 3131 MAP3K1 (ENSRROG00000035924) SETD9 (ENSRROG00000041808) MIER3 (ENSRROG00000041892) ENSRROG00000041132 #22 GPBP1 (ENSRROG00000032693) ACTBL2 (ENSRROG00000006201) Hominoidea ANCESTRAL SPECIES 19 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Gibbon MODERN SPECIES 6 NIPAL2 (ENSNLEG00000002626) POP1 (ENSNLEG00000002541) RIDA (ENSNLEG00000027254) ERICH5 (ENSNLEG00000002460) ASPH (ENSNLEG00000002208) CLVS1 (ENSNLEG00000002146) ENSNLEG00000002143 ENSNLEG00000033932 ENSNLEG00000035467 ENSNLEG00000033557 CHD7 (ENSNLEG00000002027) RAB2A (ENSNLEG00000036148) ENSNLEG00000029912 CA8 (ENSNLEG00000001830) TOX (ENSNLEG00000001791) ENSNLEG00000035613 #22 ENSNLEG00000032927 NSMAF (ENSNLEG00000001542) SDCBP (ENSNLEG00000001408) CYP7A1 (ENSNLEG00000001373) ENSNLEG00000034722 UBXN2B (ENSNLEG00000033129) BPNT2 (ENSNLEG00000001322) ENSNLEG00000029194 PENK (ENSNLEG00000001307) SDR16C5 (ENSNLEG00000001266) ENSNLEG00000001238 PLAG1 (ENSNLEG00000031521) MOS (ENSNLEG00000018389) ENSNLEG00000001214 ENSNLEG00000001213 Hominidae ANCESTRAL SPECIES 10 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.d ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Orangutan MODERN SPECIES 22 AK8 (ENSPPYG00000019715) #9 ENSPPYG00000019716 #10 TSC1 (ENSPPYG00000019717) #11 GFI1B (ENSPPYG00000019718) #12 GTF3C5 (ENSPPYG00000019719) #13 ENSPPYG00000019720 ENSPPYG00000037482 #14 RALGDS (ENSPPYG00000019723) #15 ENSPPYG00000019724 OBP2B (ENSPPYG00000019725) ENSPPYG00000031612 ABO (ENSPPYG00000032466) #18 ENSPPYG00000034398 SURF6 (ENSPPYG00000031162) #23 MED22 (ENSPPYG00000031224) ENSPPYG00000019730 #22 ENSPPYG00000019731 #24 ENSPPYG00000019732 #25 SURF4 (ENSPPYG00000019733) #26 STKLD1 (ENSPPYG00000019734) #27 REXO4 (ENSPPYG00000019735) #28 ADAMTS13 (ENSPPYG00000019736) #29 CACFD1 (ENSPPYG00000019737) SLC2A6 (ENSPPYG00000019738) #30 MYMK (ENSPPYG00000019739) #31 ADAMTSL2 (ENSPPYG00000019740) #32 FAM163B (ENSPPYG00000019741) #33 DBH (ENSPPYG00000019742) #34 SARDH (ENSPPYG00000019743) #35 VAV2 (ENSPPYG00000019744) #36 BRD3OS (ENSPPYG00000038396) Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.c ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Gorilla MODERN SPECIES 22 DDX31 (ENSGGOG00000008314) #7 GTF3C4 (ENSGGOG00000008326) #8 AK8 (ENSGGOG00000002135) #9 SPACA9 (ENSGGOG00000002138) #10 TSC1 (ENSGGOG00000002139) #11 GFI1B (ENSGGOG00000015828) #12 GTF3C5 (ENSGGOG00000015837) #13 ENSGGOG00000015855 #14 RALGDS (ENSGGOG00000003440) #15 GBGT1 (ENSGGOG00000003448) ##18 ENSGGOG00000009459 ENSGGOG00000006193 ABO (ENSGGOG00000011353) #18 SURF6 (ENSGGOG00000014426) #23 MED22 (ENSGGOG00000014437) ENSGGOG00000014442 #22 ENSGGOG00000024950 SURF1 (ENSGGOG00000039195) #24 SURF2 (ENSGGOG00000014467) #25 SURF4 (ENSGGOG00000014456) #26 STKLD1 (ENSGGOG00000014486) #27 REXO4 (ENSGGOG00000014508) #28 ADAMTS13 (ENSGGOG00000012541) #29 ENSGGOG00000012563 SLC2A6 (ENSGGOG00000012569) #30 MYMK (ENSGGOG00000014738) #31 ADAMTSL2 (ENSGGOG00000011127) #32 FAM163B (ENSGGOG00000040732) #33 DBH (ENSGGOG00000016022) #34 SARDH (ENSGGOG00000016030) #35 VAV2 (ENSGGOG00000007911) #36 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.d ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Pan ANCESTRAL SPECIES 18 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.c ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Chimpanzee MODERN SPECIES ELK4 (ENSPTRG00000001902) SLC45A3 (ENSPTRG00000001903) NUCKS1 (ENSPTRG00000048501) RAB29 (ENSPTRG00000001905) SLC41A1 (ENSPTRG00000001906) PM20D1 (ENSPTRG00000001907) SLC26A9 (ENSPTRG00000001908) RAB7B (ENSPTRG00000048926) CTSE (ENSPTRG00000022821) RHEX (ENSPTRG00000023332) AVPR1B (ENSPTRG00000023708) ENSPTRG00000023098 SRGAP2 (ENSPTRG00000001909) IKBKE (ENSPTRG00000001910) RASSF5 (ENSPTRG00000001912) ENSPTRG00000048979 #22 EIF2D (ENSPTRG00000001913) DYRK3 (ENSPTRG00000001914) MAPKAPK2 (ENSPTRG00000001915) ENSPTRG00000049056 IL10 (ENSPTRG00000001916) IL19 (ENSPTRG00000001917) IL20 (ENSPTRG00000001918) IL24 (ENSPTRG00000001919) FCMR (ENSPTRG00000001920) PIGR (ENSPTRG00000001921) FCAMR (ENSPTRG00000001922) C1H1orf116 (ENSPTRG00000001923) YOD1 (ENSPTRG00000045303) PFKFB2 (ENSPTRG00000001925) C4BPB (ENSPTRG00000001926) Bonobo DUPLICATION Bonobo MODERN SPECIES SLC45A3 (ENSPPAG00000042471) NUCKS1 (ENSPPAG00000031082) ENSPPAG00000014956 RAB29 (ENSPPAG00000013675) SLC41A1 (ENSPPAG00000033980) PM20D1 (ENSPPAG00000042310) SLC26A9 (ENSPPAG00000013194) RAB7B (ENSPPAG00000037308) CTSE (ENSPPAG00000037615) RHEX (ENSPPAG00000025324) AVPR1B (ENSPPAG00000036422) ENSPPAG00000002734 SRGAP2 (ENSPPAG00000040467) IKBKE (ENSPPAG00000038774) RASSF5 (ENSPPAG00000030157) ENSPPAG00000031189 #22 EIF2D (ENSPPAG00000034016) DYRK3 (ENSPPAG00000036822) ENSPPAG00000027637 MAPKAPK2 (ENSPPAG00000036203) IL10 (ENSPPAG00000008601) ENSPPAG00000035187 IL20 (ENSPPAG00000029055) IL24 (ENSPPAG00000036282) FCMR (ENSPPAG00000041511) PIGR (ENSPPAG00000035924) FCAMR (ENSPPAG00000031523) C1orf116 (ENSPPAG00000000106) YOD1 (ENSPPAG00000033947) PFKFB2 (ENSPPAG00000041619) C4BPB (ENSPPAG00000034105) Bonobo MODERN SPECIES 22 DDX31 (ENSPPAG00000027761) #7 GTF3C4 (ENSPPAG00000014319) #8 AK8 (ENSPPAG00000035422) #9 SPACA9 (ENSPPAG00000028794) #10 TSC1 (ENSPPAG00000035459) #11 GFI1B (ENSPPAG00000030105) #12 GTF3C5 (ENSPPAG00000029135) #13 CEL (ENSPPAG00000034136) #14 RALGDS (ENSPPAG00000041413) #15 GBGT1 (ENSPPAG00000025608) ##18 ENSPPAG00000040239 ENSPPAG00000039342 ABO (ENSPPAG00000035877) #18 SURF6 (ENSPPAG00000032305) #23 MED22 (ENSPPAG00000042477) ENSPPAG00000018940 #22 SURF1 (ENSPPAG00000028495) #24 SURF2 (ENSPPAG00000031707) #25 SURF4 (ENSPPAG00000028946) #26 STKLD1 (ENSPPAG00000040907) #27 REXO4 (ENSPPAG00000027911) #28 ADAMTS13 (ENSPPAG00000030531) #29 ENSPPAG00000011930 SLC2A6 (ENSPPAG00000036854) #30 MYMK (ENSPPAG00000032051) #31 ADAMTSL2 (ENSPPAG00000028971) #32 FAM163B (ENSPPAG00000037328) #33 DBH (ENSPPAG00000036112) #34 SARDH (ENSPPAG00000027059) #35 VAV2 (ENSPPAG00000037516) #36 BRD3OS (ENSPPAG00000003967) Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Macaca ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Macaca_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Crab-eating macaque MODERN SPECIES 19 FGF8 (ENSMFAG00000003751) FBXW4 (ENSMFAG00000044810) DPCD (ENSMFAG00000036058) POLL (ENSMFAG00000043080) BTRC (ENSMFAG00000005295) TLX1 (ENSMFAG00000045878) KAZALD1 (ENSMFAG00000063924) SFXN3 (ENSMFAG00000035501) PDZD7 (ENSMFAG00000037794) LZTS2 (ENSMFAG00000048904) TWNK (ENSMFAG00000032824) MRPL43 (ENSMFAG00000036954) SEMA4G (ENSMFAG00000038405) SLF2 (ENSMFAG00000042449) PAX2 (ENSMFAG00000041514) ENSMFAG00000004864 ##22 HIF1AN (ENSMFAG00000043376) ENSMFAG00000040760 SEC31B (ENSMFAG00000043520) WNT8B (ENSMFAG00000035598) ENSMFAG00000040755 PKD2L1 (ENSMFAG00000030987) ENSMFAG00000031202 CHUK (ENSMFAG00000000426) ENSMFAG00000062447 ERLIN1 (ENSMFAG00000042046) ENSMFAG00000041054 CPN1 (ENSMFAG00000007369) DNMBP (ENSMFAG00000002036) ABCC2 (ENSMFAG00000042907) CUTC (ENSMFAG00000031857) Vervet Monkey MODERN SPECIES 17 NPL (ENSCSAG00000012535) RGS8 (ENSCSAG00000012525) RGS16 (ENSCSAG00000012520) RNASEL (ENSCSAG00000012514) RGSL1 (ENSCSAG00000012503) TEDDM1 (ENSCSAG00000000242) ENSCSAG00000000241 GLUL (ENSCSAG00000012490) ZNF648 (ENSCSAG00000000240) CACNA1E (ENSCSAG00000012479) IER5 (ENSCSAG00000000239) MR1 (ENSCSAG00000012455) STX6 (ENSCSAG00000012445) KIAA1614 (ENSCSAG00000012424) XPR1 (ENSCSAG00000012398) ENSCSAG00000000238 ##22 ACBD6 (ENSCSAG00000012394) LHX4 (ENSCSAG00000012389) QSOX1 (ENSCSAG00000012360) CEP350 (ENSCSAG00000012261) TOR1AIP1 (ENSCSAG00000012246) TOR1AIP2 (ENSCSAG00000012239) FAM163A (ENSCSAG00000012230) TDRD5 (ENSCSAG00000012216) NPHS2 (ENSCSAG00000012172) AXDND1 (ENSCSAG00000012156) SOAT1 (ENSCSAG00000012108) ABL2 (ENSCSAG00000012097) TOR3A (ENSCSAG00000012093) FAM20B (ENSCSAG00000012087) RALGPS2 (ENSCSAG00000012075) Hominoidea ANCESTRAL SPECIES 19 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Hominidae ANCESTRAL SPECIES 10 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.d ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b.c ENSGT01050000244868.a.a.a.a.b.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.s #22 ENSGT00390000014818.j ENSGT00940000153294.m.b.r.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607.a #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Pan ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.a ##22 Chimpanzee MODERN SPECIES 22 CFAP77 (ENSPTRG00000021497) BARHL1 (ENSPTRG00000021499) DDX31 (ENSPTRG00000021500) #7 GTF3C4 (ENSPTRG00000021501) #8 AK8 (ENSPTRG00000021502) #9 SPACA9 (ENSPTRG00000022917) #10 TSC1 (ENSPTRG00000021504) #11 GFI1B (ENSPTRG00000021505) #12 GTF3C5 (ENSPTRG00000021506) #13 RALGDS (ENSPTRG00000021509) #15 GBGT1 (ENSPTRG00000021510) ##18 ENSPTRG00000021511 ENSPTRG00000044289 SURF6 (ENSPTRG00000021514) #23 MED22 (ENSPTRG00000021515) RPL7A (ENSPTRG00000051833) ##22 SURF1 (ENSPTRG00000021517) #24 SURF2 (ENSPTRG00000021518) #25 SURF4 (ENSPTRG00000021519) #26 STKLD1 (ENSPTRG00000024153) #27 REXO4 (ENSPTRG00000023363) #28 ADAMTS13 (ENSPTRG00000022942) #29 CACFD1 (ENSPTRG00000024267) SLC2A6 (ENSPTRG00000023818) #30 MYMK (ENSPTRG00000023019) #31 ADAMTSL2 (ENSPTRG00000022572) #32 FAM163B (ENSPTRG00000047128) #33 DBH (ENSPTRG00000021521) #34 SARDH (ENSPTRG00000021522) #35 VAV2 (ENSPTRG00000021525) #36 BRD3OS (ENSPTRG00000047397) Gorilla MODERN SPECIES 9 ST8SIA5 (ENSGGOG00000013794) LOXHD1 (ENSGGOG00000005588) RNF165 (ENSGGOG00000005584) HAUS1 (ENSGGOG00000010098) ATP5F1A (ENSGGOG00000016560) ENSGGOG00000041127 PSTPIP2 (ENSGGOG00000025030) EPG5 (ENSGGOG00000007816) SIGLEC15 (ENSGGOG00000007810) SLC14A1 (ENSGGOG00000008152) SLC14A2 (ENSGGOG00000001047) SETBP1 (ENSGGOG00000014151) SYT4 (ENSGGOG00000006097) RIT2 (ENSGGOG00000005603) PIK3C3 (ENSGGOG00000015471) ENSGGOG00000023088 ##22 CELF4 (ENSGGOG00000013920) KIAA1328 (ENSGGOG00000011074) ENSGGOG00000011061 FHOD3 (ENSGGOG00000011046) MOCOS (ENSGGOG00000009642) ELP2 (ENSGGOG00000004679) SLC39A6 (ENSGGOG00000010347) RPRD1A (ENSGGOG00000007369) C18orf21 (ENSGGOG00000026334) ENSGGOG00000036755 GALNT1 (ENSGGOG00000006840) INO80C (ENSGGOG00000026291) ZNF396 (ENSGGOG00000023692) ZNF24 (ENSGGOG00000041313) ENSGGOG00000016098 Catarrhini ANCESTRAL SPECIES 13 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00940000153294.m.a.c.b.p ##22 ENSGT00390000014818 ENSGT00940000153294.m.b.s #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153294.m.b.r.b ##22 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Macaca ANCESTRAL SPECIES 10 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00910000147066 ENSGT00940000153294.m.b.s.e.a ##22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000159729 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00940000164691.a.a.a.a.b.a.b #21 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b.r.b ##22 ENSGT00940000153294.m.b.s.f #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Crab-eating macaque MODERN SPECIES 6 CFAP77 (ENSMFAG00000001992) BARHL1 (ENSMFAG00000001005) DDX31 (ENSMFAG00000036342) #7 GTF3C4 (ENSMFAG00000041984) #8 AK8 (ENSMFAG00000032283) #9 SPACA9 (ENSMFAG00000033110) #10 TSC1 (ENSMFAG00000007299) #11 GFI1B (ENSMFAG00000043346) #12 GTF3C5 (ENSMFAG00000041901) #13 ENSMFAG00000050859 CEL (ENSMFAG00000042247) #14 RALGDS (ENSMFAG00000043674) #15 ENSMFAG00000058803 ENSMFAG00000048334 #21 SURF6 (ENSMFAG00000047763) #23 ENSMFAG00000036880 ##22 MED22 (ENSMFAG00000042665) SURF1 (ENSMFAG00000032426) #24 SURF2 (ENSMFAG00000031802) #25 SURF4 (ENSMFAG00000045368) #26 ENSMFAG00000057657 STKLD1 (ENSMFAG00000041753) #27 REXO4 (ENSMFAG00000042425) #28 ADAMTS13 (ENSMFAG00000000040) #29 ENSMFAG00000038988 SLC2A6 (ENSMFAG00000035331) #30 MYMK (ENSMFAG00000033845) #31 ADAMTSL2 (ENSMFAG00000001650) #32 FAM163B (ENSMFAG00000042458) #33 DBH (ENSMFAG00000041482) #34 SARDH (ENSMFAG00000038559) #35 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000153294.m.b.p #22 Cebidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.p #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.p #22 Capuchin MODERN SPECIES 266 EHD2 (ENSCCAG00000035777) BICRA (ENSCCAG00000026467) ZNF541 (ENSCCAG00000037140) NAPA (ENSCCAG00000033321) KPTN (ENSCCAG00000027753) SLC8A2 (ENSCCAG00000014965) MEIS3 (ENSCCAG00000003816) DHX34 (ENSCCAG00000028675) C5AR1 (ENSCCAG00000035091) CCDC9 (ENSCCAG00000028908) ENSCCAG00000026596 SAE1 (ENSCCAG00000031780) ZC3H4 (ENSCCAG00000037597) TMEM160 (ENSCCAG00000031011) NPAS1 (ENSCCAG00000032406) ENSCCAG00000021097 #22 ARHGAP35 (ENSCCAG00000022601) AP2S1 (ENSCCAG00000028431) SLC1A5 (ENSCCAG00000033717) FKRP (ENSCCAG00000015087) STRN4 (ENSCCAG00000034066) PRKD2 (ENSCCAG00000032043) DACT3 (ENSCCAG00000008006) GNG8 (ENSCCAG00000029845) PTGIR (ENSCCAG00000021110) ENSCCAG00000033630 Bolivian squirrel monkey MODERN SPECIES 42 ENSSBOG00000014231 FRY (ENSSBOG00000024918) RXFP2 (ENSSBOG00000014035) ENSSBOG00000024650 B3GLCT (ENSSBOG00000027304) HSPH1 (ENSSBOG00000021221) ENSSBOG00000023117 #22 TEX26 (ENSSBOG00000029547) MEDAG (ENSSBOG00000014983) ALOX5AP (ENSSBOG00000035529) USPL1 (ENSSBOG00000028053) ENSSBOG00000024496 ENSSBOG00000023208 KATNAL1 (ENSSBOG00000009792) ENSSBOG00000020013 ##22 UBL3 (ENSSBOG00000009211) ENSSBOG00000028866 SLC7A1 (ENSSBOG00000020061) MTUS2 (ENSSBOG00000026505) ENSSBOG00000019071 SLC46A3 (ENSSBOG00000025396) POMP (ENSSBOG00000032229) Platyrrhini ANCESTRAL SPECIES ENSGT00940000153294.m.b.q #22 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 649 ENSANAG00000035878 NLRP1 (ENSANAG00000000698) ENSANAG00000009039 MIS12 (ENSANAG00000015438) ENSANAG00000031099 DHX33 (ENSANAG00000037748) ENSANAG00000032527 RPAIN (ENSANAG00000028660) NUP88 (ENSANAG00000032703) RABEP1 (ENSANAG00000028248) SCIMP (ENSANAG00000033409) ZNF594 (ENSANAG00000023997) ZNF232 (ENSANAG00000037004) ZFP3 (ENSANAG00000019832) SLC52A1 (ENSANAG00000024730) ENSANAG00000033130 #22 KIF1C (ENSANAG00000029960) INCA1 (ENSANAG00000038026) CAMTA2 (ENSANAG00000031565) SPAG7 (ENSANAG00000020862) ENSANAG00000020318 PFN1 (ENSANAG00000002125) RNF167 (ENSANAG00000034776) SLC25A11 (ENSANAG00000034058) ENSANAG00000032025 C17orf107 (ENSANAG00000032134) CHRNE (ENSANAG00000037518) MINK1 (ENSANAG00000024571) PLD2 (ENSANAG00000022528) C17orf114 (ENSANAG00000021901) PSMB6 (ENSANAG00000032934) Mas night monkey MODERN SPECIES 728 PHKB (ENSANAG00000034968) ENSANAG00000031204 ITFG1 (ENSANAG00000025551) ENSANAG00000030138 ENSANAG00000024441 #22 DNAJA2 (ENSANAG00000036069) ENSANAG00000028948 GPT2 (ENSANAG00000024936) C16orf87 (ENSANAG00000027251) Cebidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.q #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000153294.m.b.q #22 Bolivian squirrel monkey MODERN SPECIES 66 ENSSBOG00000035760 SCAF4 (ENSSBOG00000024068) HUNK (ENSSBOG00000026563) MIS18A (ENSSBOG00000033176) MRAP (ENSSBOG00000029482) URB1 (ENSSBOG00000027672) EVA1C (ENSSBOG00000028646) CFAP298 (ENSSBOG00000019656) SYNJ1 (ENSSBOG00000021001) PAXBP1 (ENSSBOG00000030172) C21orf62 (ENSSBOG00000021330) ENSSBOG00000016676 OLIG2 (ENSSBOG00000033043) OLIG1 (ENSSBOG00000023447) IFNAR2 (ENSSBOG00000031096) ENSSBOG00000018437 #22 IFNAR1 (ENSSBOG00000021344) ENSSBOG00000019424 IFNGR2 (ENSSBOG00000019645) TMEM50B (ENSSBOG00000012972) DNAJC28 (ENSSBOG00000035319) GART (ENSSBOG00000027956) SON (ENSSBOG00000020885) ENSSBOG00000034050 CRYZL1 (ENSSBOG00000022246) ITSN1 (ENSSBOG00000026172) ENSSBOG00000029690 SLC5A3 (ENSSBOG00000019154) MRPS6 (ENSSBOG00000034972) SMIM11 (ENSSBOG00000032382) ENSSBOG00000029680 Tarsier MODERN SPECIES 5939 FYB1 (ENSTSYG00000006519) C9 (ENSTSYG00000009398) ENSTSYG00000036235 #22 DAB2 (ENSTSYG00000003683) LRP4 (ENSTSYG00000010791) ENSTSYG00000027636 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.d #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Bushbaby MODERN SPECIES 202 CARD9 (ENSOGAG00000024499) SNAPC4 (ENSOGAG00000015861) ENSOGAG00000015872 PMPCA (ENSOGAG00000015875) ENSOGAG00000007682 ENSOGAG00000024858 INPP5E (ENSOGAG00000015883) SEC16A (ENSOGAG00000015887) NOTCH1 (ENSOGAG00000015908) EGFL7 (ENSOGAG00000007178) AGPAT2 (ENSOGAG00000025726) DIPK1B (ENSOGAG00000008561) ABO (ENSOGAG00000029319) #18 SURF6 (ENSOGAG00000027199) #23 MED22 (ENSOGAG00000014026) ENSOGAG00000014027 #22 ENSOGAG00000024295 #26 SURF2 (ENSOGAG00000031360) #25 STKLD1 (ENSOGAG00000014034) #27 REXO4 (ENSOGAG00000014040) #28 ENSOGAG00000014043 #29 SLC2A6 (ENSOGAG00000014051) #30 MYMK (ENSOGAG00000025687) #31 ADAMTSL2 (ENSOGAG00000014056) #32 FAM163B (ENSOGAG00000006830) #33 DBH (ENSOGAG00000006832) #34 SARDH (ENSOGAG00000006836) #35 VAV2 (ENSOGAG00000028052) #36 ENSOGAG00000031006 BRD3 (ENSOGAG00000004568) #37 WDR5 (ENSOGAG00000008960) #19 Lemuriformes ANCESTRAL SPECIES 12 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.d #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Mouse lemur MODERN SPECIES 1 GPSM1 (ENSMICG00000033412) DNLZ (ENSMICG00000027594) CARD9 (ENSMICG00000005799) SNAPC4 (ENSMICG00000005804) ENSMICG00000005829 PMPCA (ENSMICG00000005847) INPP5E (ENSMICG00000005855) SEC16A (ENSMICG00000005865) NOTCH1 (ENSMICG00000009527) EGFL7 (ENSMICG00000047232) AGPAT2 (ENSMICG00000017382) DIPK1B (ENSMICG00000015407) ABO (ENSMICG00000012209) #18 SURF6 (ENSMICG00000046077) #23 MED22 (ENSMICG00000028119) ENSMICG00000036165 #22 SURF1 (ENSMICG00000007597) #24 SURF2 (ENSMICG00000007604) #25 SURF4 (ENSMICG00000037009) #26 STKLD1 (ENSMICG00000008399) #27 REXO4 (ENSMICG00000008422) #28 ENSMICG00000047114 #29 ENSMICG00000011799 #29 CACFD1 (ENSMICG00000031108) SLC2A6 (ENSMICG00000012653) #30 MYMK (ENSMICG00000038732) #31 ADAMTSL2 (ENSMICG00000031225) #32 FAM163B (ENSMICG00000028608) #33 DBH (ENSMICG00000015378) #34 ENSMICG00000031652 #35 GLT6D1 (ENSMICG00000047100) ##18 Lemuriformes_a ANCESTRAL SPECIES 2 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.d #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Greater bamboo lemur MODERN SPECIES 1540 ABO (ENSPSMG00000010904) #18 SURF6 (ENSPSMG00000010916) #23 MED22 (ENSPSMG00000010937) ENSPSMG00000010946 #22 SURF1 (ENSPSMG00000010994) #24 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 1004 ENSPCOG00000012156 ABO (ENSPCOG00000015940) #18 SURF6 (ENSPCOG00000015707) #23 MED22 (ENSPCOG00000021507) ENSPCOG00000022601 #22 SURF1 (ENSPCOG00000021726) #24 SURF2 (ENSPCOG00000020075) #25 SURF4 (ENSPCOG00000023265) #26 STKLD1 (ENSPCOG00000021306) #27 REXO4 (ENSPCOG00000025466) #28 ADAMTS13 (ENSPCOG00000027644) #29 CACFD1 (ENSPCOG00000021787) SLC2A6 (ENSPCOG00000020805) #30 MYMK (ENSPCOG00000016450) #31 ADAMTSL2 (ENSPCOG00000022674) #32 FAM163B (ENSPCOG00000020821) #33 DBH (ENSPCOG00000023145) #34 SARDH (ENSPCOG00000018819) #35 VAV2 (ENSPCOG00000015147) #36 Coquerels sifaka MODERN SPECIES 128 EMG1 (ENSPCOG00000028560) LPCAT3 (ENSPCOG00000021530) C1S (ENSPCOG00000018942) C1R (ENSPCOG00000021412) C1RL (ENSPCOG00000025155) RBP5 (ENSPCOG00000024308) CLSTN3 (ENSPCOG00000022319) PEX5 (ENSPCOG00000017563) CD163L1 (ENSPCOG00000001924) CD163 (ENSPCOG00000015026) CLEC4E (ENSPCOG00000017330) CLEC4D (ENSPCOG00000023414) CLEC6A (ENSPCOG00000016396) CLEC4A (ENSPCOG00000017101) NECAP1 (ENSPCOG00000019762) ENSPCOG00000026746 #22 FOXJ2 (ENSPCOG00000005417) ENSPCOG00000009702 ENSPCOG00000025681 ENSPCOG00000019057 DPPA3 (ENSPCOG00000022180) GDF3 (ENSPCOG00000025144) APOBEC1 (ENSPCOG00000013957) ENSPCOG00000019228 MFAP5 (ENSPCOG00000023526) RIMKLB (ENSPCOG00000015009) A2ML1 (ENSPCOG00000023058) PHC1 (ENSPCOG00000021640) M6PR (ENSPCOG00000014985) KLRG1 (ENSPCOG00000018705) A2M (ENSPCOG00000021109) Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.a ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00940000153294.m.a.c.b ##22 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Glires ANCESTRAL SPECIES 9 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.a ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00940000153294.m.a.c.b ##22 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Rodentia ANCESTRAL SPECIES 9 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.a ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00940000153294.m.a.c.b ##22 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT01050000248521 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 Rodentia_B ANCESTRAL SPECIES 85 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Kangaroo rat MODERN SPECIES 437 Surf6 (ENSDORG00000010761) #23 Med22 (ENSDORG00000006469) ENSDORG00000006471 #22 Surf1 (ENSDORG00000025934) #24 Surf2 (ENSDORG00000026726) #25 Surf4 (ENSDORG00000006186) #26 Stkld1 (ENSDORG00000006187) #27 Rexo4 (ENSDORG00000006190) #28 Adamts13 (ENSDORG00000004424) #29 Cacfd1 (ENSDORG00000028197) Slc2a6 (ENSDORG00000004429) #30 Mymk (ENSDORG00000010902) #31 Adamtsl2 (ENSDORG00000010903) #32 Fam163b (ENSDORG00000026782) #33 Dbh (ENSDORG00000015677) #34 Sardh (ENSDORG00000015678) #35 Vav2 (ENSDORG00000011913) #36 Brd3 (ENSDORG00000012653) #37 Myomorpha ANCESTRAL SPECIES 101 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Muroidea ANCESTRAL SPECIES 122 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Muroidea_A ANCESTRAL SPECIES 65 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Murinae ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 13 Rpl9-ps31 (ENSRNOG00000030476) ENSRNOG00000067433 Abo3 (ENSRNOG00000039906) #18 ENSRNOG00000064101 LOC681385 (ENSRNOG00000030708) ENSRNOG00000069598 LOC681385 (ENSRNOG00000043494) Abo2 (ENSRNOG00000045801) #18 ENSRNOG00000070414 AABR07051348.1 (ENSRNOG00000059455) AABR07051348.2 (ENSRNOG00000060791) Rps13 (ENSRNOG00000067444) Abo (ENSRNOG00000046958) #18 Surf6 (ENSRNOG00000005031) #23 Med22 (ENSRNOG00000005059) Rpl7a (ENSRNOG00000070974) #22 Surf4 (ENSRNOG00000060005) #26 Surf1 (ENSRNOG00000005247) #26 Surf2 (ENSRNOG00000066832) #25 Stkld1 (ENSRNOG00000027911) #27 Rexo4 (ENSRNOG00000027867) #28 Adamts13 (ENSRNOG00000005780) #29 Cacfd1 (ENSRNOG00000005840) Slc2a6 (ENSRNOG00000005900) #30 Gm13398 (ENSRNOG00000070103) Mymk (ENSRNOG00000006142) Adamtsl2 (ENSRNOG00000027742) #32 Fam163b (ENSRNOG00000065438) #33 Dbh (ENSRNOG00000006641) #34 Sardh (ENSRNOG00000006916) #35 Vav2 (ENSRNOG00000007422) #36 Rat MODERN SPECIES 9 ENSRNOG00000062351 ENSRNOG00000069260 Dsc1 (ENSRNOG00000056258) Dsc2 (ENSRNOG00000039969) Dsc3 (ENSRNOG00000017159) Cdh2 (ENSRNOG00000015602) AC118833.1 (ENSRNOG00000038412) Chst9 (ENSRNOG00000015867) Aqp4 (ENSRNOG00000016043) Rpl39 (ENSRNOG00000034237) Kctd1 (ENSRNOG00000016467) Taf4b (ENSRNOG00000026023) Psma8 (ENSRNOG00000030363) Ss18 (ENSRNOG00000016800) Zfp521 (ENSRNOG00000016874) LOC108349606 (ENSRNOG00000031244) #22 Hrh4 (ENSRNOG00000016887) Impact (ENSRNOG00000045844) Osbpl1a (ENSRNOG00000054058) Cabyr (ENSRNOG00000047436) Ttc39c (ENSRNOG00000050949) Lama3 (ENSRNOG00000011300) Ankrd29 (ENSRNOG00000046744) Npc1 (ENSRNOG00000012016) Rmc1 (ENSRNOG00000012597) Riok3 (ENSRNOG00000023376) Tmem241 (ENSRNOG00000023412) Cables1 (ENSRNOG00000012795) Rbbp8 (ENSRNOG00000012899) Gata6 (ENSRNOG00000023433) ENSRNOG00000071008 Rat MODERN SPECIES LOC681006 (ENSRNOG00000025953) Hspa12a (ENSRNOG00000018019) ENSRNOG00000068353 Eno4 (ENSRNOG00000018310) Shtn1 (ENSRNOG00000018350) Vax1 (ENSRNOG00000008824) Kcnk18 (ENSRNOG00000032706) Slc18a2 (ENSRNOG00000008890) Pdzd8 (ENSRNOG00000009460) Emx2 (ENSRNOG00000009482) Rab11fip2 (ENSRNOG00000009523) Fam204a (ENSRNOG00000009830) Prlhr (ENSRNOG00000009922) Cacul1 (ENSRNOG00000009954) LOC100359574 (ENSRNOG00000025154) AABR07007121.1 (ENSRNOG00000033843) #22 Nanos1 (ENSRNOG00000025060) Eif3a (ENSRNOG00000010117) Dennd10 (ENSRNOG00000010230) Sfxn4 (ENSRNOG00000036572) Prdx3 (ENSRNOG00000010958) Grk5 (ENSRNOG00000011439) LOC102550291 (ENSRNOG00000032668) LOC102550729 (ENSRNOG00000066489) RGD1563099 (ENSRNOG00000051496) Ces2i (ENSRNOG00000012034) Ces2c (ENSRNOG00000036571) Rat DUPLICATION Rat MODERN SPECIES 14 Vom1r74 (ENSRNOG00000063497) Vom1r73 (ENSRNOG00000062405) Vom1r72 (ENSRNOG00000062606) Vom1r71 (ENSRNOG00000047851) Vom1r69 (ENSRNOG00000063291) Vom1r68 (ENSRNOG00000062765) ENSRNOG00000067683 Vom1r66 (ENSRNOG00000063440) Vom1r67 (ENSRNOG00000070293) Vom1r65 (ENSRNOG00000057387) Nt5c3a (ENSRNOG00000005981) Fkbp9 (ENSRNOG00000005478) Kbtbd2 (ENSRNOG00000013809) Avl9 (ENSRNOG00000013314) Lsm5 (ENSRNOG00000042126) ENSRNOG00000069707 #22 Pde1c (ENSRNOG00000012337) Ppp1r17 (ENSRNOG00000012235) Itprid1 (ENSRNOG00000012165) Neurod6 (ENSRNOG00000026055) Adcyap1r1 (ENSRNOG00000012098) Ghrhr (ENSRNOG00000011808) Aqp1 (ENSRNOG00000011648) Mindy4 (ENSRNOG00000011530) Inmt (ENSRNOG00000011250) Crhr2 (ENSRNOG00000011145) Gars1 (ENSRNOG00000011052) AABR07060610.1 (ENSRNOG00000033748) Ggct (ENSRNOG00000034084) Nod1 (ENSRNOG00000010629) Znrf2 (ENSRNOG00000049057) Rat MODERN SPECIES 1 Smurf2 (ENSRNOG00000014623) Kpna2 (ENSRNOG00000015329) C10h17orf58 (ENSRNOG00000043295) Bptf (ENSRNOG00000047296) Nol11 (ENSRNOG00000052934) Pitpnc1 (ENSRNOG00000069160) RGD1359290 (ENSRNOG00000027271) ENSRNOG00000065925 Psmd12 (ENSRNOG00000003117) Helz (ENSRNOG00000003213) Cacng1 (ENSRNOG00000003245) Cacng4 (ENSRNOG00000003262) Cacng5 (ENSRNOG00000003288) Prkca (ENSRNOG00000003491) Apoh (ENSRNOG00000003566) AABR07030630.1 (ENSRNOG00000052124) #22 Cep112 (ENSRNOG00000024557) Axin2 (ENSRNOG00000055010) RGD1565459 (ENSRNOG00000033613) Rgs9 (ENSRNOG00000003800) AC106648.1 (ENSRNOG00000042252) Gna13 (ENSRNOG00000063135) Amz2 (ENSRNOG00000000246) Slc16a6 (ENSRNOG00000000245) Arsg (ENSRNOG00000003931) Wipi1 (ENSRNOG00000003827) Prkar1a (ENSRNOG00000049876) Fam20a (ENSRNOG00000003969) RGD1559578 (ENSRNOG00000024233) Abca8 (ENSRNOG00000004040) Abca8a (ENSRNOG00000004147) Rat MODERN SPECIES 6 LOC120096939 (ENSRNOG00000065418) ENSRNOG00000070413 Ptgdr (ENSRNOG00000031535) LOC100363427 (ENSRNOG00000066375) ENSRNOG00000063234 AABR07017236.2 (ENSRNOG00000057837) AABR07017236.1 (ENSRNOG00000024504) Flnb (ENSRNOG00000009470) LOC108353015 (ENSRNOG00000061275) Dnase1l3 (ENSRNOG00000009291) Abhd6 (ENSRNOG00000008167) Rpp14 (ENSRNOG00000039829) Rpp14 (ENSRNOG00000063660) Pxk (ENSRNOG00000008024) Pdhb (ENSRNOG00000007895) AABR07072440.1 (ENSRNOG00000033030) #22 ENSRNOG00000028821 Kctd6 (ENSRNOG00000007817) Acox2 (ENSRNOG00000007378) Fam107a (ENSRNOG00000033261) Fam3d (ENSRNOG00000007320) ENSRNOG00000070952 Cfap20dc (ENSRNOG00000007206) Fhit (ENSRNOG00000064939) Tpt1-ps2 (ENSRNOG00000070732) Ptprg (ENSRNOG00000009419) LOC103693281 (ENSRNOG00000063454) RGD1306063 (ENSRNOG00000039871) Fezf2 (ENSRNOG00000009206) Cadps (ENSRNOG00000008570) ENSRNOG00000068103 Mus ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Shrew mouse MODERN SPECIES 16 Card9 (MGP_PahariEiJ_G0024769) Snapc4 (MGP_PahariEiJ_G0024770) Entr1 (MGP_PahariEiJ_G0024771) Pmpca (MGP_PahariEiJ_G0024772) Inpp5e (MGP_PahariEiJ_G0024773) Sec16a (MGP_PahariEiJ_G0024774) Notch1 (MGP_PahariEiJ_G0024775) Egfl7 (MGP_PahariEiJ_G0024776) MGP_PahariEiJ_G0024777 Agpat2 (MGP_PahariEiJ_G0024778) Dipk1b (MGP_PahariEiJ_G0024779) Lcn4 (MGP_PahariEiJ_G0024780) Abo (MGP_PahariEiJ_G0024781) #18 Surf6 (MGP_PahariEiJ_G0024782) #23 Med22 (MGP_PahariEiJ_G0024783) MGP_PahariEiJ_G0024784 #22 Surf1 (MGP_PahariEiJ_G0024785) #24 Surf2 (MGP_PahariEiJ_G0024786) #25 Surf4 (MGP_PahariEiJ_G0024787) #26 Stkld1 (MGP_PahariEiJ_G0024788) #27 Rexo4 (MGP_PahariEiJ_G0024789) #28 Adamts13 (MGP_PahariEiJ_G0024790) #29 Cacfd1 (MGP_PahariEiJ_G0024791) Slc2a6 (MGP_PahariEiJ_G0024792) #30 Mymk (MGP_PahariEiJ_G0024793) #31 Adamtsl2 (MGP_PahariEiJ_G0024794) #32 Fam163b (MGP_PahariEiJ_G0024795) #33 Dbh (MGP_PahariEiJ_G0024796) #34 Sardh (MGP_PahariEiJ_G0024797) #35 Vav2 (MGP_PahariEiJ_G0024798) #36 Brd3 (MGP_PahariEiJ_G0024799) #37 Mus_A ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Mus_B ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Mus_C ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 35 Hecw1 (ENSMSIG00000017159) ENSMSIG00000017216 #22 Arid4b (ENSMSIG00000017230) Ggps1 (ENSMSIG00000017308) Tbce (ENSMSIG00000017330) B3galnt2 (ENSMSIG00000017362) ENSMSIG00000017641 Gng4 (ENSMSIG00000017646) Steppe mouse MODERN SPECIES 3234 Crem (ENSMSIG00000021310) Cul2 (ENSMSIG00000021240) ENSMSIG00000021213 #15 Bambi (ENSMSIG00000021200) ENSMSIG00000021196 ENSMSIG00000021191 ENSMSIG00000021186 Map3k8 (ENSMSIG00000021174) Mtpap (ENSMSIG00000021163) Jcad (ENSMSIG00000021144) ENSMSIG00000021138 #22 Svil (ENSMSIG00000019710) Zfp438 (ENSMSIG00000019631) Zeb1 (ENSMSIG00000019545) Arhgap12 (ENSMSIG00000019302) Kif5b (ENSMSIG00000019257) Epc1 (ENSMSIG00000019175) Cricetidae ANCESTRAL SPECIES 71 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 1 Pja2 (ENSCGRG00001011203) Fer (ENSCGRG00001004390) Fbxl17 (ENSCGRG00001011618) Efna5 (ENSCGRG00001003426) ENSCGRG00001006211 ENSCGRG00001011066 Nudt12 (ENSCGRG00001006711) ENSCGRG00001003228 Macir (ENSCGRG00001009855) Ppip5k2 (ENSCGRG00001002274) Gin1 (ENSCGRG00001004458) Pam (ENSCGRG00001011006) ENSCGRG00001010780 Slco4c1 (ENSCGRG00001010874) ENSCGRG00001003799 ENSCGRG00001004644 #22 St8sia4 (ENSCGRG00001004612) ENSCGRG00001010345 Fam174a (ENSCGRG00001002695) Pdcd1 (ENSCGRG00001002477) Neu4 (ENSCGRG00001009931) ENSCGRG00001000728 D2hgdh (ENSCGRG00001002513) Ing5 (ENSCGRG00001004863) Dtymk (ENSCGRG00001000666) Atg4b (ENSCGRG00001001760) ENSCGRG00001006751 Thap4 (ENSCGRG00001002632) Bok (ENSCGRG00001024808) Stk25 (ENSCGRG00001005671) Farp2 (ENSCGRG00001003923) Chinese hamster chok1gshd MODERN SPECIES 16 Steep1 (ENSCGRG00001022334) ENSCGRG00001007178 Slc25a43 (ENSCGRG00001003699) Akap17b (ENSCGRG00001018171) Pgrmc1 (ENSCGRG00001019069) ENSCGRG00001000825 Lonrf3 (ENSCGRG00001002226) Zcchc12 (ENSCGRG00001011149) Il13ra1 (ENSCGRG00001020150) Dock11 (ENSCGRG00001021213) Wdr44 (ENSCGRG00001022218) Klhl13 (ENSCGRG00001021812) ENSCGRG00001015227 ENSCGRG00001010136 Slc6a14 (ENSCGRG00001016499) ENSCGRG00001015787 #22 Agtr2 (ENSCGRG00001009526) ENSCGRG00001017952 ENSCGRG00001019114 Pls3 (ENSCGRG00001011289) ENSCGRG00001004444 Lrch2 (ENSCGRG00001020464) Il13ra2 (ENSCGRG00001001265) Htr2c (ENSCGRG00001017187) ENSCGRG00001012570 ENSCGRG00001019270 ENSCGRG00001021667 Amot (ENSCGRG00001022119) Lhfpl1 (ENSCGRG00001022195) Rtl4 (ENSCGRG00001001788) Trpc5 (ENSCGRG00001002419) Cricetidae_B ANCESTRAL SPECIES 103 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 353 Klhl7 (ENSMOCG00000014969) Nupl2 (ENSMOCG00000014431) Gpnmb (ENSMOCG00000017232) Malsu1 (ENSMOCG00000011177) Igf2bp3 (ENSMOCG00000001740) ENSMOCG00000014464 ENSMOCG00000007609 Ccdc126 (ENSMOCG00000004033) Fam221a (ENSMOCG00000005873) Stk31 (ENSMOCG00000005284) Plekha8 (ENSMOCG00000012638) Fkbp14 (ENSMOCG00000002920) Scrn1 (ENSMOCG00000001909) Wipf3 (ENSMOCG00000016079) Prr15 (ENSMOCG00000008900) ENSMOCG00000006975 #22 Chn2 (ENSMOCG00000020808) ENSMOCG00000002376 Cpvl (ENSMOCG00000021500) Tril (ENSMOCG00000001138) Creb5 (ENSMOCG00000012076) Jazf1 (ENSMOCG00000019670) Tax1bp1 (ENSMOCG00000011041) Hibadh (ENSMOCG00000020758) Mturn (ENSMOCG00000019319) ENSMOCG00000008922 Nod1 (ENSMOCG00000022664) Ggct (ENSMOCG00000001055) Gars (ENSMOCG00000017680) Crhr2 (ENSMOCG00000019712) Inmt (ENSMOCG00000015765) Prairie vole MODERN SPECIES 354 Inpp5d (ENSMOCG00000020774) Atg16l1 (ENSMOCG00000022107) Sag (ENSMOCG00000010548) Dgkd (ENSMOCG00000013358) Usp40 (ENSMOCG00000013866) Dnajb3 (ENSMOCG00000005295) Ugt1a1 (ENSMOCG00000006377) Mroh2a (ENSMOCG00000016439) Hjurp (ENSMOCG00000013256) Trpm8 (ENSMOCG00000011314) Spp2 (ENSMOCG00000019546) Arl4c (ENSMOCG00000006232) Sh3bp4 (ENSMOCG00000008692) Agap1 (ENSMOCG00000017793) Gbx2 (ENSMOCG00000000815) ENSMOCG00000022588 #22 Asb18 (ENSMOCG00000021264) Iqca (ENSMOCG00000001121) Ackr3 (ENSMOCG00000011622) ENSMOCG00000010460 Col6a3 (ENSMOCG00000012323) Mlph (ENSMOCG00000002134) Prlh (ENSMOCG00000018025) Rab17 (ENSMOCG00000006448) ENSMOCG00000017590 Rbm44 (ENSMOCG00000001523) Ramp1 (ENSMOCG00000020434) Ube2f (ENSMOCG00000015739) Scly (ENSMOCG00000000935) Espnl (ENSMOCG00000004560) Klhl30 (ENSMOCG00000014281) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 Cdk13 (ENSPEMG00000020703) ENSPEMG00000027212 Rala (ENSPEMG00000026406) Yae1d1 (ENSPEMG00000026901) ENSPEMG00000020563 Vps41 (ENSPEMG00000022150) Amph (ENSPEMG00000001572) ENSPEMG00000030093 ENSPEMG00000030898 Stard3nl (ENSPEMG00000012415) Epdr1 (ENSPEMG00000028013) Sfrp4 (ENSPEMG00000023817) Nme8 (ENSPEMG00000021510) Gpr141b (ENSPEMG00000029118) Gpr141 (ENSPEMG00000004105) ENSPEMG00000027404 #22 Elmo1 (ENSPEMG00000018278) Aoah (ENSPEMG00000010535) Or2p2 (ENSPEMG00000005086) ENSPEMG00000022745 Or2ad1 (ENSPEMG00000001338) Trim27 (ENSPEMG00000022731) Gpx5 (ENSPEMG00000022573) Gpx6 (ENSPEMG00000013981) Or2b28 (ENSPEMG00000027072) ENSPEMG00000026606 Zkscan3 (ENSPEMG00000030234) Zscan26 (ENSPEMG00000021720) Nkapl (ENSPEMG00000027175) Zkscan4 (ENSPEMG00000002530) ENSPEMG00000030945 Northern American deer mouse MODERN SPECIES 7 Bend3 (ENSPEMG00000031300) Mtres1 (ENSPEMG00000019114) ENSPEMG00000029014 ENSPEMG00000009329 Qrsl1 (ENSPEMG00000009855) Rtn4ip1 (ENSPEMG00000009749) Crybg1 (ENSPEMG00000006428) Atg5 (ENSPEMG00000023746) Prdm1 (ENSPEMG00000023622) Prep (ENSPEMG00000015306) Popdc3 (ENSPEMG00000012534) Bves (ENSPEMG00000014540) Lin28b (ENSPEMG00000015724) Hace1 (ENSPEMG00000006907) ENSPEMG00000025768 ENSPEMG00000028199 #22 ENSPEMG00000024704 Grik2 (ENSPEMG00000016459) ENSPEMG00000013305 Ascc3 (ENSPEMG00000015319) Sim1 (ENSPEMG00000029968) Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.b ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT01050000248521 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 Hystricomorpha ANCESTRAL SPECIES 7 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a.c.b ##22 ENSGT00940000155193.a.a.f ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT01050000248521 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Hystricomorpha_a ANCESTRAL SPECIES 5 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT01050000244868.a.a.a.a.a.b.l ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01090000263159 Hystricomorpha_b ANCESTRAL SPECIES 36 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT01050000244868.a.a.a.a.a.b.l ENSGT01050000244868.a.a.a.a.a.b.k.b ENSGT01050000244868.a.a.a.a.a.b.k.a ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01090000263159 Long-tailed chinchilla MODERN SPECIES 220 BARHL1 (ENSCLAG00000013082) DDX31 (ENSCLAG00000008431) #7 GTF3C4 (ENSCLAG00000009930) #8 AK8 (ENSCLAG00000010073) #9 SPACA9 (ENSCLAG00000013602) #10 TSC1 (ENSCLAG00000012367) #11 GFI1B (ENSCLAG00000009914) #12 GTF3C5 (ENSCLAG00000011273) #13 CEL (ENSCLAG00000009166) #14 RALGDS (ENSCLAG00000004723) #15 GBGT1 (ENSCLAG00000005202) ##18 ENSCLAG00000005378 ENSCLAG00000005902 SURF6 (ENSCLAG00000004429) #23 MED22 (ENSCLAG00000004487) ENSCLAG00000006800 #22 SURF1 (ENSCLAG00000008095) #24 SURF2 (ENSCLAG00000009277) #25 SURF4 (ENSCLAG00000010537) #26 STKLD1 (ENSCLAG00000011038) #27 REXO4 (ENSCLAG00000006919) #28 ADAMTS13 (ENSCLAG00000007542) #29 CACFD1 (ENSCLAG00000008418) SLC2A6 (ENSCLAG00000005054) #30 MYMK (ENSCLAG00000006416) #31 ADAMTSL2 (ENSCLAG00000009177) #32 FAM163B (ENSCLAG00000014453) #33 DBH (ENSCLAG00000011674) #34 SARDH (ENSCLAG00000004708) #35 VAV2 (ENSCLAG00000004486) #36 ENSCLAG00000017720 Degu DUPLICATION Degu MODERN SPECIES 164 GPSM1 (ENSODEG00000015347) DNLZ (ENSODEG00000015199) CARD9 (ENSODEG00000015926) ENSODEG00000015531 ENSODEG00000015730 PMPCA (ENSODEG00000014945) INPP5E (ENSODEG00000015384) SEC16A (ENSODEG00000015396) NOTCH1 (ENSODEG00000015576) EGFL7 (ENSODEG00000016479) AGPAT2 (ENSODEG00000015549) DIPK1B (ENSODEG00000015451) ENSODEG00000015745 SURF6 (ENSODEG00000015789) #23 MED22 (ENSODEG00000015723) ENSODEG00000016465 #22 SURF1 (ENSODEG00000016201) #24 SURF2 (ENSODEG00000015768) #25 SURF4 (ENSODEG00000015392) #26 STKLD1 (ENSODEG00000015481) #27 REXO4 (ENSODEG00000015721) #28 ADAMTS13 (ENSODEG00000016041) #29 CACFD1 (ENSODEG00000015773) SLC2A6 (ENSODEG00000016923) #30 MYMK (ENSODEG00000015871) #31 ADAMTSL2 (ENSODEG00000015642) #32 FAM163B (ENSODEG00000015539) #33 DBH (ENSODEG00000015985) #34 SARDH (ENSODEG00000016561) #35 VAV2 (ENSODEG00000015817) #36 BRD3 (ENSODEG00000016350) #37 Degu MODERN SPECIES 147 ROBO1 (ENSODEG00000002460) ROBO2 (ENSODEG00000002784) LIPI (ENSODEG00000003255) HSPA13 (ENSODEG00000000402) SAMSN1 (ENSODEG00000000435) ENSODEG00000018579 #22 NRIP1 (ENSODEG00000018584) USP25 (ENSODEG00000000485) ENSODEG00000000631 CXADR (ENSODEG00000000658) ENSODEG00000000738 C21orf91 (ENSODEG00000000761) CHODL (ENSODEG00000000802) TMPRSS15 (ENSODEG00000000865) ENSODEG00000000936 Sciuridae ANCESTRAL SPECIES 6 ENSGT00940000159729 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Eurasian red squirrel MODERN SPECIES 6 QSOX2 (ENSSVLG00005025160) LHX3 (ENSSVLG00005025119) TMEM250 (ENSSVLG00005025103) NACC2 (ENSSVLG00005025091) UBAC1 (ENSSVLG00005025073) CAMSAP1 (ENSSVLG00005025049) KCNT1 (ENSSVLG00005024585) LCN9 (ENSSVLG00005024137) GLT6D1 (ENSSVLG00005024094) ##18 ENSSVLG00005024053 ENSSVLG00005024035 ENSSVLG00005024000 ENSSVLG00005023982 SURF6 (ENSSVLG00005023958) #23 MED22 (ENSSVLG00005023932) ENSSVLG00005023881 #22 SURF1 (ENSSVLG00005023857) #24 SURF2 (ENSSVLG00005023844) #25 SURF4 (ENSSVLG00005023794) #26 STKLD1 (ENSSVLG00005023713) #27 REXO4 (ENSSVLG00005023657) #28 ENSSVLG00005023604 #29 ENSSVLG00005023576 CACFD1 (ENSSVLG00005023540) SLC2A6 (ENSSVLG00005023408) #30 MYMK (ENSSVLG00005023355) #31 ADAMTSL2 (ENSSVLG00005023256) #32 FAM163B (ENSSVLG00005023227) #33 DBH (ENSSVLG00005023140) #34 SARDH (ENSSVLG00005023038) #35 VAV2 (ENSSVLG00005022963) #36 Marmotini ANCESTRAL SPECIES 1 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Marmotini_b ANCESTRAL SPECIES 2 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Squirrel MODERN SPECIES 269 SURF6 (ENSSTOG00000020164) #23 MED22 (ENSSTOG00000029035) ENSSTOG00000003671 #22 SURF1 (ENSSTOG00000003694) #24 SURF2 (ENSSTOG00000003709) #25 SURF4 (ENSSTOG00000003719) #26 STKLD1 (ENSSTOG00000003731) #27 REXO4 (ENSSTOG00000003754) #28 ADAMTS13 (ENSSTOG00000003765) #29 ENSSTOG00000029752 CACFD1 (ENSSTOG00000003808) SLC2A6 (ENSSTOG00000003816) #30 MYMK (ENSSTOG00000025119) #31 ADAMTSL2 (ENSSTOG00000019622) #32 FAM163B (ENSSTOG00000020618) #33 DBH (ENSSTOG00000025607) #34 SARDH (ENSSTOG00000004316) #35 VAV2 (ENSSTOG00000028773) #36 Arctic ground squirrel MODERN SPECIES 156 CFAP77 (ENSUPAG00010011437) BARHL1 (ENSUPAG00010011426) DDX31 (ENSUPAG00010011408) #7 ENSUPAG00010011403 #8 AK8 (ENSUPAG00010011364) #9 SPACA9 (ENSUPAG00010011343) #10 TSC1 (ENSUPAG00010011312) #11 GFI1B (ENSUPAG00010011298) #12 GTF3C5 (ENSUPAG00010011268) #13 CEL (ENSUPAG00010011253) #14 RALGDS (ENSUPAG00010009287) #15 GBGT1 (ENSUPAG00010009274) ##18 ENSUPAG00010009264 SURF6 (ENSUPAG00010009255) #23 MED22 (ENSUPAG00010009242) ENSUPAG00010009198 #22 SURF1 (ENSUPAG00010009179) #24 ENSUPAG00010009151 #25 SURF4 (ENSUPAG00010009141) #26 STKLD1 (ENSUPAG00010009115) #27 REXO4 (ENSUPAG00010008958) #28 ADAMTS13 (ENSUPAG00010008908) #29 ENSUPAG00010008892 CACFD1 (ENSUPAG00010008860) SLC2A6 (ENSUPAG00010008783) #30 MYMK (ENSUPAG00010008772) #31 ADAMTSL2 (ENSUPAG00010008744) #32 FAM163B (ENSUPAG00010008738) #33 DBH (ENSUPAG00010008724) #34 SARDH (ENSUPAG00010008680) #35 VAV2 (ENSUPAG00010008660) #36 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 1 NDUFB1 (ENSMMMG00000021282) ATXN3 (ENSMMMG00000021276) ENSMMMG00000021267 FBLN5 (ENSMMMG00000021250) TC2N (ENSMMMG00000021222) ENSMMMG00000021215 ENSMMMG00000021204 PPP4R3A (ENSMMMG00000021190) CCDC88C (ENSMMMG00000020527) GPR68 (ENSMMMG00000020514) RPS6KA5 (ENSMMMG00000020471) TTC7B (ENSMMMG00000020445) CALM1 (ENSMMMG00000020416) NRDE2 (ENSMMMG00000020400) PSMC1 (ENSMMMG00000020391) ENSMMMG00000020367 #22 KCNK13 (ENSMMMG00000020361) TDP1 (ENSMMMG00000020339) EFCAB11 (ENSMMMG00000020326) FOXN3 (ENSMMMG00000020285) TTC8 (ENSMMMG00000020231) EML5 (ENSMMMG00000020125) ZC3H14 (ENSMMMG00000020046) ENSMMMG00000020019 SPATA7 (ENSMMMG00000019962) KCNK10 (ENSMMMG00000019948) GPR65 (ENSMMMG00000019938) GALC (ENSMMMG00000019834) FLRT2 (ENSMMMG00000019832) ENSMMMG00000019815 SEL1L (ENSMMMG00000019769) Alpin marmot MODERN SPECIES 106 MED22 (ENSMMMG00000013316) ENSMMMG00000013289 #22 SURF1 (ENSMMMG00000013272) #24 SURF2 (ENSMMMG00000013265) #25 SURF4 (ENSMMMG00000013258) #26 STKLD1 (ENSMMMG00000013221) #27 REXO4 (ENSMMMG00000013212) #28 ADAMTS13 (ENSMMMG00000013143) #29 CACFD1 (ENSMMMG00000013114) SLC2A6 (ENSMMMG00000013088) #30 MYMK (ENSMMMG00000013077) #31 ADAMTSL2 (ENSMMMG00000013058) #32 FAM163B (ENSMMMG00000013054) #33 DBH (ENSMMMG00000013038) #34 SARDH (ENSMMMG00000013013) #35 VAV2 (ENSMMMG00000012975) #36 ENSMMMG00000012966 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT00940000170286 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.n ##22 ENSGT00940000153294.m.a ##22 ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000166736 ENSGT00940000157589 #35 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.n ##22 ENSGT00940000153294.m.a ##22 ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z.b #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a.m #18 ENSGT00950000182858.A.a.a.n #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.n ##22 ENSGT00940000153294.m.a ##22 ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Carnivora ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Felidae ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Panthera ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153294.m.b #22 leopard MODERN SPECIES 4 MRPS14 (ENSPPRG00000002784) CACYBP (ENSPPRG00000003167) ENSPPRG00000004959 RABGAP1L (ENSPPRG00000006701) RC3H1 (ENSPPRG00000009007) ENSPPRG00000009111 SERPINC1 (ENSPPRG00000009289) ZBTB37 (ENSPPRG00000009652) DARS2 (ENSPPRG00000010631) CENPL (ENSPPRG00000011158) KLHL20 (ENSPPRG00000011339) TEX50 (ENSPPRG00000011560) ANKRD45 (ENSPPRG00000011813) SLC9C2 (ENSPPRG00000014266) PRDX6 (ENSPPRG00000016047) ENSPPRG00000016936 #22 ENSPPRG00000017713 TNFSF18 (ENSPPRG00000018325) FASLG (ENSPPRG00000020589) SUCO (ENSPPRG00000000565) PIGC (ENSPPRG00000016328) C1orf105 (ENSPPRG00000000954) ENSPPRG00000001133 DNM3 (ENSPPRG00000004896) METTL13 (ENSPPRG00000006545) VAMP4 (ENSPPRG00000007465) MYOC (ENSPPRG00000007616) PRRC2C (ENSPPRG00000011842) FMO4 (ENSPPRG00000012099) FMO1 (ENSPPRG00000012807) FMO2 (ENSPPRG00000013227) Caniformia ANCESTRAL SPECIES 106 ENSGT00940000153294.m.b #22 ENSGT00390000014818.p Caniformia_b ANCESTRAL SPECIES 118 ENSGT00940000153294.m.b #22 ENSGT00390000014818.p Ursidae ANCESTRAL SPECIES 142 ENSGT00940000153294.m.b #22 ENSGT00390000014818.p Giant Panda MODERN SPECIES 1734 ENSAMEG00000027937 #22 ENSAMEG00000019001 Canidae DUPLICATION Canidae DUPLICATION Canidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.v.a #22 Red fox MODERN SPECIES 173 GMDS (ENSVVUG00000019130) RPLP2 (ENSVVUG00000019125) MYLK4 (ENSVVUG00000019119) WRNIP1 (ENSVVUG00000019115) SERPINB1 (ENSVVUG00000019110) SERPINB9 (ENSVVUG00000019101) ENSVVUG00000019088 NQO2 (ENSVVUG00000019083) RIPK1 (ENSVVUG00000019070) ENSVVUG00000019068 ENSVVUG00000019060 ENSVVUG00000019059 TUBB2B (ENSVVUG00000019054) SLC22A23 (ENSVVUG00000019044) PXDC1 (ENSVVUG00000019041) ENSVVUG00000019034 #22 PRPF4B (ENSVVUG00000019025) FAM217A (ENSVVUG00000019019) ENSVVUG00000019015 ECI2 (ENSVVUG00000019007) CDYL (ENSVVUG00000018989) Canis_lupus ANCESTRAL SPECIES ENSGT00940000153294.m.b.v.a #22 Dingo MODERN SPECIES 411 GMDS (ENSCAFG00020000552) MYLK4 (ENSCAFG00020000493) WRNIP1 (ENSCAFG00020000482) SERPINB1 (ENSCAFG00020000473) SERPINB9 (ENSCAFG00020000463) ENSCAFG00020000462 NQO2 (ENSCAFG00020000450) ENSCAFG00020000437 RIPK1 (ENSCAFG00020000428) BPHL (ENSCAFG00020000419) TUBB2B (ENSCAFG00020000389) ENSCAFG00020000376 SLC22A23 (ENSCAFG00020000148) ENSCAFG00020000138 ENSCAFG00020000131 ENSCAFG00020000116 #22 ENSCAFG00020000097 PRPF4B (ENSCAFG00020013403) FAM217A (ENSCAFG00020013397) ENSCAFG00020013395 ECI2 (ENSCAFG00020013391) ENSCAFG00020013385 CDYL (ENSCAFG00020013382) RPP40 (ENSCAFG00020013380) ENSCAFG00020013366 LYRM4 (ENSCAFG00020013362) FARS2 (ENSCAFG00020013360) NRN1 (ENSCAFG00020013359) F13A1 (ENSCAFG00020013298) LY86 (ENSCAFG00020013271) RREB1 (ENSCAFG00020013260) Canidae ANCESTRAL SPECIES ENSGT00940000153294.m.b.v.b #22 Red fox MODERN SPECIES 164 MOSPD3 (ENSVVUG00000023456) TFR2 (ENSVVUG00000023458) ACTL6B (ENSVVUG00000023465) GNB2 (ENSVVUG00000023466) GIGYF1 (ENSVVUG00000023468) POP7 (ENSVVUG00000023472) EPO (ENSVVUG00000023476) ZAN (ENSVVUG00000023487) EPHB4 (ENSVVUG00000023535) SLC12A9 (ENSVVUG00000023538) TRIP6 (ENSVVUG00000023541) SRRT (ENSVVUG00000023572) UFSP1 (ENSVVUG00000023576) ACHE (ENSVVUG00000023577) ENSVVUG00000023594 ENSVVUG00000023598 #22 TRIM56 (ENSVVUG00000023601) SERPINE1 (ENSVVUG00000023603) AP1S1 (ENSVVUG00000023608) VGF (ENSVVUG00000023612) MOGAT3 (ENSVVUG00000023616) PLOD3 (ENSVVUG00000023620) ZNHIT1 (ENSVVUG00000023627) CLDN15 (ENSVVUG00000023633) FIS1 (ENSVVUG00000023650) IFT22 (ENSVVUG00000023654) COL26A1 (ENSVVUG00000023661) MYL10 (ENSVVUG00000023673) ENSVVUG00000023688 PRKRIP1 (ENSVVUG00000023702) ORAI2 (ENSVVUG00000023703) Canidae ANCESTRAL SPECIES 2 ENSGT00940000156880 ENSGT00390000000656 ENSGT00940000173695 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##18 ENSGT00850000133605 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.a.b ENSGT00950000182858.A.a.a.m #18 ENSGT00950000182858.A.a.a.n #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a ##22 ENSGT00390000014818.o.b ENSGT00940000153294.m.b.w #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT00940000153385.b.a.a #37 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT00940000173695 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##18 ENSGT00850000133605 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.a.b ENSGT00950000182858.A.a.a.m #18 ENSGT00390000006980.g #23 ENSGT00390000004339 ENSGT00940000153294.m.a ##22 ENSGT00390000014818.o.b ENSGT00940000153294.m.b.w #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT00940000153385.b.a.a #37 Dog MODERN SPECIES 37 UBAC1 (ENSCAFG00845007292) CAMSAP1 (ENSCAFG00845007447) KCNT1 (ENSCAFG00845007891) ENSCAFG00845008842 ENSCAFG00845008904 CANF2 (ENSCAFG00845008996) ENSCAFG00845009057 GLT6D1 (ENSCAFG00845009120) ##18 ENSCAFG00845009255 ENSCAFG00845009349 ENSCAFG00845009473 OBP2B (ENSCAFG00845009522) ABO (ENSCAFG00845009581) #18 ENSCAFG00845009696 #23 MED22 (ENSCAFG00845009735) RPL7A (ENSCAFG00845009780) #22 SURF1 (ENSCAFG00845009922) #24 SURF2 (ENSCAFG00845010002) #25 SURF4 (ENSCAFG00845010041) #26 STKLD1 (ENSCAFG00845010122) #27 REXO4 (ENSCAFG00845010293) #28 ADAMTS13 (ENSCAFG00845010483) #29 CACFD1 (ENSCAFG00845010594) SLC2A6 (ENSCAFG00845010650) #30 MYMK (ENSCAFG00845010708) #31 ADAMTSL2 (ENSCAFG00845010741) #32 FAM163B (ENSCAFG00845010779) #33 DBH (ENSCAFG00845010802) #34 SARDH (ENSCAFG00845010972) #35 VAV2 (ENSCAFG00845011337) #36 BRD3 (ENSCAFG00845011912) #37 Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z.b #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a.m #18 ENSGT00950000182858.A.a.a.n #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Equus ANCESTRAL SPECIES 30 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z.b #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a.m #18 ENSGT00950000182858.A.a.a.n #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 ENSGT01030000235088 Donkey MODERN SPECIES 1 BARHL1 (ENSEASG00005009842) DDX31 (ENSEASG00005009845) #7 GTF3C4 (ENSEASG00005009846) #8 AK8 (ENSEASG00005009847) #9 SPACA9 (ENSEASG00005009848) #10 TSC1 (ENSEASG00005009849) #11 GFI1B (ENSEASG00005009852) #12 GTF3C5 (ENSEASG00005009855) #13 CEL (ENSEASG00005009861) #14 RALGDS (ENSEASG00005009872) #15 GBGT1 (ENSEASG00005009878) ##18 ABO (ENSEASG00005038246) #18 ENSEASG00005031108 #18 SURF6 (ENSEASG00005024763) #23 MED22 (ENSEASG00005027340) ENSEASG00005009897 #22 SURF1 (ENSEASG00005009904) #24 SURF2 (ENSEASG00005030289) #25 SURF4 (ENSEASG00005009909) #26 STKLD1 (ENSEASG00005009912) #27 REXO4 (ENSEASG00005026586) #28 ADAMTS13 (ENSEASG00005009916) #29 CACFD1 (ENSEASG00005009921) SLC2A6 (ENSEASG00005009925) #30 MYMK (ENSEASG00005009928) #31 ADAMTSL2 (ENSEASG00005009931) #32 FAM163B (ENSEASG00005038016) #33 DBH (ENSEASG00005009935) #34 SARDH (ENSEASG00005009944) #35 VAV2 (ENSEASG00005010031) #36 BRD3OS (ENSEASG00005036145) Horse MODERN SPECIES 17 BARHL1 (ENSECAG00000021032) GTF3C4 (ENSECAG00000019248) #8 AK8 (ENSECAG00000006330) #9 SPACA9 (ENSECAG00000008353) #10 TSC1 (ENSECAG00000009564) #11 GFI1B (ENSECAG00000008127) #12 GTF3C5 (ENSECAG00000008807) #13 CEL (ENSECAG00000013218) #14 RALGDS (ENSECAG00000021996) #15 GBGT1 (ENSECAG00000012442) ##18 ENSECAG00000048478 ENSECAG00000058413 ABO (ENSECAG00000014463) #18 SURF6 (ENSECAG00000021229) #23 MED22 (ENSECAG00000004668) RPL7A (ENSECAG00000008548) #22 SURF1 (ENSECAG00000039267) #24 SURF2 (ENSECAG00000020897) #25 SURF4 (ENSECAG00000031341) #26 STKLD1 (ENSECAG00000022240) #27 REXO4 (ENSECAG00000007896) #28 ADAMTS13 (ENSECAG00000008699) #29 CACFD1 (ENSECAG00000036846) SLC2A6 (ENSECAG00000029514) #30 ADAMTSL2 (ENSECAG00000011887) #32 MYMK (ENSECAG00000011675) #31 DBH (ENSECAG00000019582) #34 SARDH (ENSECAG00000007936) #35 VAV2 (ENSECAG00000015126) #36 BRD3 (ENSECAG00000021276) #37 WDR5 (ENSECAG00000017389) #19 Chiroptera ANCESTRAL SPECIES 8 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z.b #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a.m #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Microchiroptera ANCESTRAL SPECIES 7 ENSGT00390000014476 ENSGT00940000160428 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z.b #15 ENSGT00950000182858.A.b.b ##18 ENSGT00950000182858.A.a.a.m #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Microbat MODERN SPECIES 285 ENSMLUG00000004674 ENSMLUG00000004666 #22 SURF1 (ENSMLUG00000004677) #24 Greater horseshoe bat MODERN SPECIES 4 ENSRFEG00010005726 MRPL19 (ENSRFEG00010005699) GCFC2 (ENSRFEG00010005629) ENSRFEG00010005599 LRRTM4 (ENSRFEG00010005568) ENSRFEG00010005543 ENSRFEG00010014244 ENSRFEG00010014177 LRRTM1 (ENSRFEG00010013989) CTNNA2 (ENSRFEG00010013591) ENSRFEG00010013508 SUCLG1 (ENSRFEG00010013453) DNAH6 (ENSRFEG00010012455) TMSB10 (ENSRFEG00010012256) KCMF1 (ENSRFEG00010012206) ENSRFEG00010012190 #22 TCF7L1 (ENSRFEG00010012140) ENSRFEG00010012085 RETSAT (ENSRFEG00010012053) ELMOD3 (ENSRFEG00010011983) CAPG (ENSRFEG00010011887) ENSRFEG00010011863 MAT2A (ENSRFEG00010011814) GGCX (ENSRFEG00010011702) VAMP8 (ENSRFEG00010011634) ENSRFEG00010011487 TMEM150A (ENSRFEG00010011398) C2orf68 (ENSRFEG00010011347) USP39 (ENSRFEG00010010822) SFTPB (ENSRFEG00010010754) ENSRFEG00010010730 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b ENSGT01050000244868.a.a.a.b.b.d ENSGT01050000244868.a.a.a.b.b.c ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.a ##22 ENSGT00390000014818 ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Suina ANCESTRAL SPECIES 37 ENSGT00550000075041 #7 ENSGT00390000011873 #8 ENSGT00940000161613 #9 ENSGT00390000007746 #10 ENSGT00390000014148 #11 ENSGT00940000160010 #12 ENSGT00390000004458 #13 ENSGT00940000156231 #14 ENSGT00940000153181.z #15 ENSGT00950000182858.A.b.b ##18 ENSGT01050000244868.a.a.a.a.a.b ENSGT01050000244868.a.a.a.a.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339 ENSGT00940000153294.m.b #22 ENSGT00940000153294.m.a ##22 ENSGT00390000014818 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 Chacoan peccary MODERN SPECIES 73 ABO (ENSCWAG00000008383) #18 SURF6 (ENSCWAG00000008447) #23 MED22 (ENSCWAG00000008475) ENSCWAG00000008528 #22 ENSCWAG00000008661 SURF1 (ENSCWAG00000008692) #24 SURF2 (ENSCWAG00000008726) #25 SURF4 (ENSCWAG00000008810) #26 STKLD1 (ENSCWAG00000008904) #27 REXO4 (ENSCWAG00000009058) #28 ENSCWAG00000009103 #29 ENSCWAG00000009240 CACFD1 (ENSCWAG00000009282) SLC2A6 (ENSCWAG00000009309) #30 MYMK (ENSCWAG00000009374) #31 ADAMTSL2 (ENSCWAG00000009412) #32 FAM163B (ENSCWAG00000009448) #33 DBH (ENSCWAG00000009472) #34 SARDH (ENSCWAG00000009573) #35 Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##18 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT01050000244868.a.a.a.a.a.b ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Camelidae ANCESTRAL SPECIES 65 ENSGT00940000154667.a ENSGT00390000008220.c ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00940000170286 ENSGT00390000004339.e.b ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Arabian camel MODERN SPECIES 30 GPSM1 (ENSCDRG00005001642) ENSCDRG00005001626 CARD9 (ENSCDRG00005001608) SNAPC4 (ENSCDRG00005001573) ENTR1 (ENSCDRG00005001472) PMPCA (ENSCDRG00005001401) INPP5E (ENSCDRG00005001361) SEC16A (ENSCDRG00005001240) NOTCH1 (ENSCDRG00005001130) ENSCDRG00005001079 AGPAT2 (ENSCDRG00005001034) DIPK1B (ENSCDRG00005001006) ENSCDRG00005000956 #18 ENSCDRG00005000937 ENSCDRG00005000916 ENSCDRG00005000860 #22 SURF1 (ENSCDRG00005000843) #24 ENSCDRG00005000827 SURF2 (ENSCDRG00005000808) #25 ENSCDRG00005000794 #26 STKLD1 (ENSCDRG00005000727) #27 REXO4 (ENSCDRG00005000665) #28 ENSCDRG00005000643 #29 ENSCDRG00005000622 CACFD1 (ENSCDRG00005000601) SLC2A6 (ENSCDRG00005000573) #30 MYMK (ENSCDRG00005000556) #31 ADAMTSL2 (ENSCDRG00005000516) #32 FAM163B (ENSCDRG00005000485) #33 DBH (ENSCDRG00005000427) #34 SARDH (ENSCDRG00005000337) #35 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##18 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT01050000244868.a.a.a.a.a.b ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Pecora ANCESTRAL SPECIES 5 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000166736 ENSGT00940000157589 #35 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES COPB1 (ENSCHYG00000000002) PSMA1 (ENSCHYG00000018665) ENSCHYG00000018606 PDE3B (ENSCHYG00000018075) ENSCHYG00000018022 CYP2R1 (ENSCHYG00000017908) ENSCHYG00000017748 ENSCHYG00000017694 ENSCHYG00000017642 ENSCHYG00000017547 INSC (ENSCHYG00000017107) ENSCHYG00000017074 SOX6 (ENSCHYG00000016309) C11orf58 (ENSCHYG00000016095) PLEKHA7 (ENSCHYG00000015374) ENSCHYG00000015259 #22 PIK3C2A (ENSCHYG00000014721) NUCB2 (ENSCHYG00000014573) ENSCHYG00000014538 KCNJ11 (ENSCHYG00000014523) ABCC8 (ENSCHYG00000013838) USH1C (ENSCHYG00000013383) OTOG (ENSCHYG00000013158) MYOD1 (ENSCHYG00000013095) KCNC1 (ENSCHYG00000013038) SERGEF (ENSCHYG00000012902) TPH1 (ENSCHYG00000012793) SAAL1 (ENSCHYG00000012719) ENSCHYG00000012579 ZNF202 (ENSCHYG00000012502) SCN3B (ENSCHYG00000012415) Yarkand deer MODERN SPECIES 2 ENSCHYG00000006716 GPSM1 (ENSCHYG00000006855) CARD9 (ENSCHYG00000006923) SNAPC4 (ENSCHYG00000007022) ENTR1 (ENSCHYG00000007198) PMPCA (ENSCHYG00000007436) INPP5E (ENSCHYG00000007535) SEC16A (ENSCHYG00000007686) NOTCH1 (ENSCHYG00000008626) ENSCHYG00000008811 AGPAT2 (ENSCHYG00000009123) DIPK1B (ENSCHYG00000009252) ENSCHYG00000009352 #18 SURF6 (ENSCHYG00000009401) #23 MED22 (ENSCHYG00000009429) ENSCHYG00000009488 #22 SURF1 (ENSCHYG00000009643) #24 SURF2 (ENSCHYG00000009850) #25 SURF4 (ENSCHYG00000009955) #26 ENSCHYG00000010174 REXO4 (ENSCHYG00000010246) #28 ADAMTS13 (ENSCHYG00000010317) #29 CACFD1 (ENSCHYG00000010507) SLC2A6 (ENSCHYG00000010600) #30 MYMK (ENSCHYG00000010712) #31 ADAMTSL2 (ENSCHYG00000010768) #32 ENSCHYG00000011166 #33 DBH (ENSCHYG00000011205) #34 SARDH (ENSCHYG00000011277) #35 VAV2 (ENSCHYG00000011531) #36 ENSCHYG00000012265 Percora_a ANCESTRAL SPECIES 27 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000166736 ENSGT00940000157589 #35 Siberian musk deer MODERN SPECIES 1178 ENSMMSG00000017799 GPSM1 (ENSMMSG00000017853) DNLZ (ENSMMSG00000018005) CARD9 (ENSMMSG00000018040) SNAPC4 (ENSMMSG00000018179) ENTR1 (ENSMMSG00000018277) PMPCA (ENSMMSG00000018461) INPP5E (ENSMMSG00000018533) SEC16A (ENSMMSG00000018596) NOTCH1 (ENSMMSG00000018769) EGFL7 (ENSMMSG00000018878) AGPAT2 (ENSMMSG00000018937) DIPK1B (ENSMMSG00000018999) SURF6 (ENSMMSG00000019063) #23 MED22 (ENSMMSG00000019115) ENSMMSG00000017005 #22 ENSMMSG00000017048 #24 SURF2 (ENSMMSG00000017092) #25 SURF4 (ENSMMSG00000017110) #26 REXO4 (ENSMMSG00000017141) #28 ENSMMSG00000017170 #29 ENSMMSG00000017237 CACFD1 (ENSMMSG00000017256) SLC2A6 (ENSMMSG00000017296) #30 MYMK (ENSMMSG00000017340) #31 ADAMTSL2 (ENSMMSG00000017376) #32 FAM163B (ENSMMSG00000017414) #33 DBH (ENSMMSG00000017445) #34 SARDH (ENSMMSG00000017534) #35 VAV2 (ENSMMSG00000017731) #36 ENSMMSG00000018028 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000166736 ENSGT00940000157589 #35 Caprinae ANCESTRAL SPECIES 27 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Goat DUPLICATION Goat MODERN SPECIES 2 ENSCHIG00000017713 DNLZ (ENSCHIG00000019744) CARD9 (ENSCHIG00000013779) SNAPC4 (ENSCHIG00000013796) ENTR1 (ENSCHIG00000018825) PMPCA (ENSCHIG00000013065) INPP5E (ENSCHIG00000004726) SEC16A (ENSCHIG00000020286) NOTCH1 (ENSCHIG00000021033) EGFL7 (ENSCHIG00000023457) AGPAT2 (ENSCHIG00000014858) DIPK1B (ENSCHIG00000014246) ENSCHIG00000016256 #18 SURF6 (ENSCHIG00000025220) #23 MED22 (ENSCHIG00000025808) ENSCHIG00000003945 #22 SURF1 (ENSCHIG00000005972) #24 SURF2 (ENSCHIG00000022633) #25 SURF4 (ENSCHIG00000016835) #26 REXO4 (ENSCHIG00000009517) #28 ADAMTS13 (ENSCHIG00000025823) #29 CACFD1 (ENSCHIG00000022694) SLC2A6 (ENSCHIG00000022381) #30 MYMK (ENSCHIG00000025700) #31 ADAMTSL2 (ENSCHIG00000010630) #32 FAM163B (ENSCHIG00000017935) #33 DBH (ENSCHIG00000015269) #34 SARDH (ENSCHIG00000017015) #35 VAV2 (ENSCHIG00000021915) #36 BRD3 (ENSCHIG00000007578) #37 WDR5 (ENSCHIG00000023578) #19 Goat MODERN SPECIES 26 FBN2 (ENSCHIG00000013312) SLC12A2 (ENSCHIG00000027061) CCDC192 (ENSCHIG00000016359) CTXN3 (ENSCHIG00000007407) PRRC1 (ENSCHIG00000026659) MEGF10 (ENSCHIG00000025358) C5orf63 (ENSCHIG00000023331) ENSCHIG00000010842 MARCHF3 (ENSCHIG00000024023) ENSCHIG00000008661 LMNB1 (ENSCHIG00000013615) TEX43 (ENSCHIG00000019799) PHAX (ENSCHIG00000019187) ALDH7A1 (ENSCHIG00000008246) GRAMD2B (ENSCHIG00000025691) ENSCHIG00000010010 #22 ZNF608 (ENSCHIG00000026647) CSNK1G3 (ENSCHIG00000025226) ENSCHIG00000009675 CEP120 (ENSCHIG00000011238) PRDM6 (ENSCHIG00000025154) ENSCHIG00000011061 PPIC (ENSCHIG00000015045) ENSCHIG00000007585 SNX2 (ENSCHIG00000007248) SNCAIP (ENSCHIG00000013060) ENSCHIG00000008598 LOX (ENSCHIG00000017030) SRFBP1 (ENSCHIG00000019724) FTMT (ENSCHIG00000004660) ENSCHIG00000011744 Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020004267 CARD9 (ENSOARG00020004236) SNAPC4 (ENSOARG00020003067) ENTR1 (ENSOARG00020002831) PMPCA (ENSOARG00020002792) INPP5E (ENSOARG00020002704) NOTCH1 (ENSOARG00020002622) ENSOARG00020002602 ENSOARG00020002591 EGFL7 (ENSOARG00020002558) ENSOARG00020002513 DIPK1B (ENSOARG00020002483) ENSOARG00020002455 #18 SURF6 (ENSOARG00020002448) #23 MED22 (ENSOARG00020002441) ENSOARG00020002423 #22 SURF1 (ENSOARG00020002412) #24 SURF2 (ENSOARG00020002406) #25 SURF4 (ENSOARG00020002392) #26 STKLD1 (ENSOARG00020002366) #27 ENSOARG00020002341 #29 ENSOARG00020002327 CACFD1 (ENSOARG00020002308) SLC2A6 (ENSOARG00020002270) #30 MYMK (ENSOARG00020002247) #31 ADAMTSL2 (ENSOARG00020002211) #32 FAM163B (ENSOARG00020002181) #33 DBH (ENSOARG00020002153) #34 SARDH (ENSOARG00020001993) #35 VAV2 (ENSOARG00020001789) #36 ENSOARG00020001755 Bovinae ANCESTRAL SPECIES 4 ENSGT00940000154667.a ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000166736 ENSGT00940000157589 #35 American bison DUPLICATION American bison MODERN SPECIES 2049 MED22 (ENSBBBG00000023316) ENSBBBG00000008410 #22 SURF1 (ENSBBBG00000023257) #24 ENSBBBG00000023246 #25 SURF4 (ENSBBBG00000023235) #26 American bison MODERN SPECIES 3311 YIPF7 (ENSBBBG00000004951) KCTD8 (ENSBBBG00000019216) GRXCR1 (ENSBBBG00000004958) ENSBBBG00000019226 ATP8A1 (ENSBBBG00000005012) ENSBBBG00000007510 SHISA3 (ENSBBBG00000019329) BEND4 (ENSBBBG00000019344) ENSBBBG00000008606 ENSBBBG00000005070 SLC30A9 (ENSBBBG00000005105) TMEM33 (ENSBBBG00000005136) ENSBBBG00000005144 LIMCH1 (ENSBBBG00000019691) UCHL1 (ENSBBBG00000019749) ENSBBBG00000007915 #22 APBB2 (ENSBBBG00000005383) NSUN7 (ENSBBBG00000019942) RBM47 (ENSBBBG00000005396) CHRNA9 (ENSBBBG00000019966) RHOH (ENSBBBG00000019980) N4BP2 (ENSBBBG00000019991) Bos ANCESTRAL SPECIES 5 ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000015224.c.a.a.b.e.a.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Bos_b ANCESTRAL SPECIES 16 ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000015224.c.a.a.b.e.a.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Cow MODERN SPECIES 2 CARD9 (ENSBTAG00000006572) SNAPC4 (ENSBTAG00000000054) ENTR1 (ENSBTAG00000001352) PMPCA (ENSBTAG00000001353) INPP5E (ENSBTAG00000001354) SEC16A (ENSBTAG00000023933) NOTCH1 (ENSBTAG00000022799) ENSBTAG00000049379 EGFL7 (ENSBTAG00000030278) AGPAT2 (ENSBTAG00000025161) DIPK1B (ENSBTAG00000021928) ENSBTAG00000030281 ABO (ENSBTAG00000012525) #18 SURF6 (ENSBTAG00000011554) #23 MED22 (ENSBTAG00000011556) RPL7A (ENSBTAG00000011559) #22 SURF1 (ENSBTAG00000030384) #24 SURF2 (ENSBTAG00000000046) #25 SURF4 (ENSBTAG00000051352) #26 STKLD1 (ENSBTAG00000004140) #27 REXO4 (ENSBTAG00000019721) #28 ADAMTS13 (ENSBTAG00000015093) #29 ENSBTAG00000051781 CACFD1 (ENSBTAG00000015097) SLC2A6 (ENSBTAG00000001824) #30 MYMK (ENSBTAG00000013242) #31 ADAMTSL2 (ENSBTAG00000007492) #32 FAM163B (ENSBTAG00000051577) #33 DBH (ENSBTAG00000004508) #34 SARDH (ENSBTAG00000004510) #35 VAV2 (ENSBTAG00000004511) #36 Hybrid Bos Indicus MODERN SPECIES 2 CARD9 (ENSBIXG00005008353) SNAPC4 (ENSBIXG00005008329) ENTR1 (ENSBIXG00005008201) PMPCA (ENSBIXG00005008108) INPP5E (ENSBIXG00005000112) SEC16A (ENSBIXG00005007954) NOTCH1 (ENSBIXG00005029490) ENSBIXG00005029555 ENSBIXG00005029589 DIPK1B (ENSBIXG00005029611) ENSBIXG00005029644 ENSBIXG00005029668 #18 ENSBIXG00005029686 SURF6 (ENSBIXG00005029689) #23 MED22 (ENSBIXG00005029700) ENSBIXG00005029716 #22 SURF1 (ENSBIXG00005029756) #24 SURF2 (ENSBIXG00005029782) #25 SURF4 (ENSBIXG00005029795) #26 STKLD1 (ENSBIXG00005029843) #27 REXO4 (ENSBIXG00005029874) #28 ADAMTS13 (ENSBIXG00005029885) #29 CACFD1 (ENSBIXG00005029903) SLC2A6 (ENSBIXG00005029919) #30 MYMK (ENSBIXG00005029930) #31 ADAMTSL2 (ENSBIXG00005029943) #32 FAM163B (ENSBIXG00005029953) #33 DBH (ENSBIXG00005029981) #34 SARDH (ENSBIXG00005030013) #35 VAV2 (ENSBIXG00005030069) #36 ENSBIXG00005030113 Bos_a ANCESTRAL SPECIES 23 ENSGT00390000008220 ENSGT00940000160570 ENSGT00940000160404 ENSGT00390000000560 ENSGT00940000156724 ENSGT00940000158199 ENSGT00940000159324 ENSGT00940000157157.b ENSGT00940000160015 ENSGT00390000008726.h.a ENSGT00390000006452.b.a ENSGT00390000015224.c.a.a.b.e.a.a ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 28 CARD9 (ENSBGRG00000025118) SNAPC4 (ENSBGRG00000025195) ENSBGRG00000025344 ENTR1 (ENSBGRG00000025355) PMPCA (ENSBGRG00000025447) INPP5E (ENSBGRG00000025512) SEC16A (ENSBGRG00000025640) NOTCH1 (ENSBGRG00000025848) ENSBGRG00000025875 AGPAT2 (ENSBGRG00000025897) DIPK1B (ENSBGRG00000025911) ENSBGRG00000025928 ENSBGRG00000025935 #18 SURF6 (ENSBGRG00000025947) #23 MED22 (ENSBGRG00000025954) ENSBGRG00000025968 #22 SURF1 (ENSBGRG00000003459) #24 SURF2 (ENSBGRG00000003491) #25 SURF4 (ENSBGRG00000003520) #26 STKLD1 (ENSBGRG00000003549) #27 REXO4 (ENSBGRG00000003644) #28 ADAMTS13 (ENSBGRG00000003687) #29 CACFD1 (ENSBGRG00000003856) SLC2A6 (ENSBGRG00000003941) #30 MYMK (ENSBGRG00000003992) #31 ADAMTSL2 (ENSBGRG00000004026) #32 ENSBGRG00000004188 #33 ENSBGRG00000004221 #33 DBH (ENSBGRG00000004235) #34 SARDH (ENSBGRG00000004368) #35 VAV2 (ENSBGRG00000004554) #36 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 23 PIK3CG (ENSBGRG00000007268) ENSBGRG00000007454 ENSBGRG00000007323 ENSBGRG00000007347 NAMPT (ENSBGRG00000007410) ENSBGRG00000007872 ENSBGRG00000007936 ENSBGRG00000007980 CDHR3 (ENSBGRG00000008038) ATXN7L1 (ENSBGRG00000008420) EFCAB10 (ENSBGRG00000008616) RINT1 (ENSBGRG00000008849) PUS7 (ENSBGRG00000008910) SRPK2 (ENSBGRG00000009007) ENSBGRG00000009238 ENSBGRG00000009259 #22 ENSBGRG00000009299 #22 KMT2E (ENSBGRG00000009356) ENSBGRG00000009439 ORC5 (ENSBGRG00000009573) RELN (ENSBGRG00000009814) SLC26A5 (ENSBGRG00000010133) PSMC2 (ENSBGRG00000010387) DNAJC2 (ENSBGRG00000010632) PMPCB (ENSBGRG00000010796) NAPEPLD (ENSBGRG00000011018) ENSBGRG00000011123 FBXL13 (ENSBGRG00000011795) LRRC17 (ENSBGRG00000013432) FAM185A (ENSBGRG00000013552) CCDC146 (ENSBGRG00000013877) Domestic yak MODERN SPECIES 23 ENSBGRG00000007454 ENSBGRG00000007323 ENSBGRG00000007347 NAMPT (ENSBGRG00000007410) ENSBGRG00000007872 ENSBGRG00000007936 ENSBGRG00000007980 CDHR3 (ENSBGRG00000008038) ATXN7L1 (ENSBGRG00000008420) EFCAB10 (ENSBGRG00000008616) RINT1 (ENSBGRG00000008849) PUS7 (ENSBGRG00000008910) SRPK2 (ENSBGRG00000009007) ENSBGRG00000009238 ENSBGRG00000009259 #22 ENSBGRG00000009299 #22 KMT2E (ENSBGRG00000009356) ENSBGRG00000009439 ORC5 (ENSBGRG00000009573) RELN (ENSBGRG00000009814) SLC26A5 (ENSBGRG00000010133) PSMC2 (ENSBGRG00000010387) DNAJC2 (ENSBGRG00000010632) PMPCB (ENSBGRG00000010796) NAPEPLD (ENSBGRG00000011018) ENSBGRG00000011123 FBXL13 (ENSBGRG00000011795) LRRC17 (ENSBGRG00000013432) FAM185A (ENSBGRG00000013552) CCDC146 (ENSBGRG00000013877) FGL2 (ENSBGRG00000014055) Domestic yak MODERN SPECIES 25 GUF1 (ENSBGRG00000001851) KCTD8 (ENSBGRG00000001931) GRXCR1 (ENSBGRG00000001939) ATP8A1 (ENSBGRG00000001965) ENSBGRG00000002087 ENSBGRG00000002096 SHISA3 (ENSBGRG00000002113) BEND4 (ENSBGRG00000002120) SLC30A9 (ENSBGRG00000002141) TMEM33 (ENSBGRG00000002211) PHOX2B (ENSBGRG00000002236) LIMCH1 (ENSBGRG00000002320) UCHL1 (ENSBGRG00000002608) ENSBGRG00000002669 APBB2 (ENSBGRG00000002693) ENSBGRG00000002737 #22 NSUN7 (ENSBGRG00000002761) RBM47 (ENSBGRG00000002798) CHRNA9 (ENSBGRG00000002828) RHOH (ENSBGRG00000002839) N4BP2 (ENSBGRG00000002859) ENSBGRG00000002884 PDS5A (ENSBGRG00000002901) UBE2K (ENSBGRG00000002976) ENSBGRG00000003067 SMIM14 (ENSBGRG00000003070) UGDH (ENSBGRG00000003085) LIAS (ENSBGRG00000003188) ENSBGRG00000003539 KLB (ENSBGRG00000003576) RFC1 (ENSBGRG00000003610) Wild yak DUPLICATION Wild yak MODERN SPECIES 901 ENSBMUG00000022315 #18 SURF6 (ENSBMUG00000022330) #23 MED22 (ENSBMUG00000022342) ENSBMUG00000022365 #22 SURF1 (ENSBMUG00000022409) #24 SURF2 (ENSBMUG00000022437) #25 SURF4 (ENSBMUG00000022452) #26 STKLD1 (ENSBMUG00000022473) #27 ENSBMUG00000000198 #29 ENSBMUG00000000248 CACFD1 (ENSBMUG00000000339) SLC2A6 (ENSBMUG00000000398) #30 MYMK (ENSBMUG00000000420) #31 ADAMTSL2 (ENSBMUG00000000460) #32 FAM163B (ENSBMUG00000000479) #33 DBH (ENSBMUG00000000502) #34 SARDH (ENSBMUG00000000658) #35 VAV2 (ENSBMUG00000000763) #36 Wild yak MODERN SPECIES 1290 ENSBMUG00000007977 ENSBMUG00000007994 PRKAR2B (ENSBMUG00000008012) PIK3CG (ENSBMUG00000008035) NAMPT (ENSBMUG00000008064) ENSBMUG00000008079 SYPL1 (ENSBMUG00000008094) CDHR3 (ENSBMUG00000008131) ATXN7L1 (ENSBMUG00000008158) EFCAB10 (ENSBMUG00000008197) RINT1 (ENSBMUG00000008230) PUS7 (ENSBMUG00000008264) SRPK2 (ENSBMUG00000008402) ENSBMUG00000008522 ENSBMUG00000008529 ENSBMUG00000008533 #22 KMT2E (ENSBMUG00000008563) LHFPL3 (ENSBMUG00000008594) ORC5 (ENSBMUG00000008608) Wild yak MODERN SPECIES 1350 ENSBMUG00000015744 ENSBMUG00000015784 UCHL1 (ENSBMUG00000015872) APBB2 (ENSBMUG00000015958) ENSBMUG00000015982 #22 NSUN7 (ENSBMUG00000016034) RBM47 (ENSBMUG00000016101) CHRNA9 (ENSBMUG00000016124) RHOH (ENSBMUG00000016136) N4BP2 (ENSBMUG00000016163) PDS5A (ENSBMUG00000016193) UBE2K (ENSBMUG00000016253) Cetacea ANCESTRAL SPECIES 9 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.a.b ENSGT00950000182858.B.a.c ##18 ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00950000182858.A.a.a #18 ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379 #29 ENSGT00940000178229 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Odontoceti ANCESTRAL SPECIES 8 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.e.a #29 ENSGT00940000158379.e.b #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Sperm whale MODERN SPECIES 501 MED22 (ENSPCTG00005020972) RPL7A (ENSPCTG00005020995) #22 SURF1 (ENSPCTG00005021027) #24 SURF2 (ENSPCTG00005021040) #25 SURF4 (ENSPCTG00005021058) #26 Odontoceti_a ANCESTRAL SPECIES 19 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.e.a #29 ENSGT00940000158379.e.b #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.c ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.e.a #29 ENSGT00940000158379.e.b #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Vaquita MODERN SPECIES 17 GPSM1 (ENSPSNG00000003585) ENSPSNG00000003644 QSOX2 (ENSPSNG00000003669) LHX3 (ENSPSNG00000003704) TMEM250 (ENSPSNG00000003733) NACC2 (ENSPSNG00000003746) UBAC1 (ENSPSNG00000003773) CAMSAP1 (ENSPSNG00000003852) ENSPSNG00000003959 KCNT1 (ENSPSNG00000004784) ENSPSNG00000006678 ENSPSNG00000006708 ENSPSNG00000006760 SURF6 (ENSPSNG00000006826) #23 MED22 (ENSPSNG00000006857) ENSPSNG00000006905 #22 SURF1 (ENSPSNG00000007027) #24 SURF2 (ENSPSNG00000007081) #25 ENSPSNG00000007113 #26 ENSPSNG00000007227 #28 ADAMTS13 (ENSPSNG00000007316) #29 CACFD1 (ENSPSNG00000007556) SLC2A6 (ENSPSNG00000007615) #30 MYMK (ENSPSNG00000007679) #31 ADAMTSL2 (ENSPSNG00000007726) #32 FAM163B (ENSPSNG00000007849) #33 DBH (ENSPSNG00000007879) #34 SARDH (ENSPSNG00000007978) #35 VAV2 (ENSPSNG00000008237) #36 BRD3 (ENSPSNG00000008397) #37 WDR5 (ENSPSNG00000008438) #19 Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000008220 ENSGT00940000154667.a ENSGT00530000065015 ENSGT00940000159734 ENSGT00940000160316 ENSGT00560000078707 ENSGT00940000159244 ENSGT00390000014658 ENSGT00950000182975.a.a.b ENSGT00940000156880 ENSGT00390000000656 ENSGT01050000244868.a.a.a.b.a.a.a ENSGT01050000244868.a.a.a.b.b.d ENSGT00390000006980 #23 ENSGT00390000004339.f ENSGT00940000153294.m.b #22 ENSGT00530000064194 #24 ENSGT00390000016800 #25 ENSGT00530000064123 #26 ENSGT00390000018038 #27 ENSGT00940000159607 #28 ENSGT00940000158379.e.a #29 ENSGT00940000158379.e.b #29 ENSGT00390000000529 ENSGT00940000159976 #30 ENSGT00940000160710 #31 ENSGT00940000159447 #32 ENSGT00940000159387 #33 ENSGT00530000063085.B #34 ENSGT00940000157589 #35 ENSGT00940000159718 #36 Narwhal MODERN SPECIES 312 GPSM1 (ENSMMNG00015017768) ENSMMNG00015017632 QSOX2 (ENSMMNG00015017566) LHX3 (ENSMMNG00015017493) TMEM250 (ENSMMNG00015017465) NACC2 (ENSMMNG00015017441) UBAC1 (ENSMMNG00015017402) CAMSAP1 (ENSMMNG00015017305) KCNT1 (ENSMMNG00015015607) ENSMMNG00015015234 ENSMMNG00015015219 ENSMMNG00015015203 SURF6 (ENSMMNG00015015192) #23 MED22 (ENSMMNG00015015176) ENSMMNG00015015148 ENSMMNG00015015131 #22 SURF1 (ENSMMNG00015015113) #24 SURF2 (ENSMMNG00015015101) #25 ENSMMNG00015015083 #26 STKLD1 (ENSMMNG00015015057) #27 ENSMMNG00015015033 #28 ADAMTS13 (ENSMMNG00015014897) #29 SLC2A6 (ENSMMNG00015014833) #30 MYMK (ENSMMNG00015014813) #31 ADAMTSL2 (ENSMMNG00015014791) #32 FAM163B (ENSMMNG00015014778) #33 DBH (ENSMMNG00015014752) #34 SARDH (ENSMMNG00015014691) #35 VAV2 (ENSMMNG00015014535) #36 ENSMMNG00015014467 BRD3 (ENSMMNG00015014410) #37