Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Primates	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.b.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.b.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Hominidae	ANCESTRAL SPECIES	7	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.b.a.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00490000044126	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000008818 #8	ENSGT00910000144277.b.a.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00490000044126	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.l #16	ENSGT00940000161608.k #17	ENSGT00950000183170.b.a.m #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866.i.a ##28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000008818 #8	ENSGT00910000144277.b.a.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00490000044126	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.l #16	ENSGT00940000161608.k #17	ENSGT00950000183170.b.a.m #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866.i.a ##28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Human	MODERN SPECIES	17	LRRC14B (ENSG00000185028) #7	CCDC127 (ENSG00000164366) #8	SDHA (ENSG00000073578) #9	PDCD6 (ENSG00000249915) #10	AHRR (ENSG00000063438) #11	EXOC3 (ENSG00000180104) #12	SLC9A3 (ENSG00000066230) #13	CEP72 (ENSG00000112877) #14	TPPP (ENSG00000171368) #15	ZDHHC11B (ENSG00000206077) #16	ZDHHC11 (ENSG00000188818) #17	BRD9 (ENSG00000028310) #18	TRIP13 (ENSG00000071539) #19	NKD2 (ENSG00000145506) #20	SLC12A7 (ENSG00000113504) #21	SLC6A19 (ENSG00000174358) #22	SLC6A18 (ENSG00000164363) #23	TERT (ENSG00000164362) #24	CLPTM1L (ENSG00000049656) #25	SLC6A3 (ENSG00000142319) #26	LPCAT1 (ENSG00000153395) #27	MRPL36 (ENSG00000171421) #28	NDUFS6 (ENSG00000145494) #29	IRX4 (ENSG00000113430) #30	IRX2 (ENSG00000170561) #31	IRX1 (ENSG00000170549) #32	ADAMTS16 (ENSG00000145536) #33	ICE1 (ENSG00000164151) #34	MED10 (ENSG00000133398) #35	UBE2QL1 (ENSG00000215218) #36	NSUN2 (ENSG00000037474) #37
Pan	ANCESTRAL SPECIES	21	ENSGT00910000144277.b.a.a.a #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT00950000186162	ENSGT01030000234613.a.a #12	ENSGT00490000044126	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.k #17	ENSGT00950000183170.b.a.n ##18	ENSGT00950000183170.b.a.m #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531.g #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866.i.a ##28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Bonobo	MODERN SPECIES	18			PLEKHG4B (ENSPPAG00000028493)	LRRC14B (ENSPPAG00000036625) #7	CCDC127 (ENSPPAG00000029438) #8	SDHA (ENSPPAG00000035300) #9	ENSPPAG00000043814 #10	AHRR (ENSPPAG00000028758) #11	ENSPPAG00000016504	EXOC3 (ENSPPAG00000033467) #12	SLC9A3 (ENSPPAG00000032817) #13	CEP72 (ENSPPAG00000027914) #14	TPPP (ENSPPAG00000029524) #15	NKD2 (ENSPPAG00000034599) #20	SLC12A7 (ENSPPAG00000029396) #21	SLC6A19 (ENSPPAG00000038033) #22	SLC6A18 (ENSPPAG00000031319) #23	TERT (ENSPPAG00000029560) #24	CLPTM1L (ENSPPAG00000015621) #25	SLC6A3 (ENSPPAG00000027557) #26	LPCAT1 (ENSPPAG00000041910) #27	MRPL36 (ENSPPAG00000012362) ##28	ENSPPAG00000038799 #29	IRX4 (ENSPPAG00000008767) #30	ENSPPAG00000035929	ENSPPAG00000031042	IRX1 (ENSPPAG00000038233) #32	ENSPPAG00000039847	ADAMTS16 (ENSPPAG00000041798) #33	ICE1 (ENSPPAG00000039831) #34	MED10 (ENSPPAG00000031009) #35
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000048810	IRX1 (ENSPTRG00000016709) #32	ENSPTRG00000050428	IRX2-DT (ENSPTRG00000028783)	IRX2 (ENSPTRG00000016708) #31	IRX4 (ENSPTRG00000046893) #30	NDUFS6 (ENSPTRG00000016706) #29	MRPL36 (ENSPTRG00000016705) ##28	ENSPTRG00000051244	LPCAT1 (ENSPTRG00000016701) #27	ENSPTRG00000045264	SLC6A3 (ENSPTRG00000016699) #26	TERT (ENSPTRG00000016696) #24	ENSPTRG00000044900 #24	SLC6A18 (ENSPTRG00000016695) #23	SLC6A19 (ENSPTRG00000016694) #22	SLC12A7 (ENSPTRG00000016692) #21	NKD2 (ENSPTRG00000016691) #20	TRIP13 (ENSPTRG00000016689) #19	ENSPTRG00000049307 ##18	ENSPTRG00000051847 #17	TPPP (ENSPTRG00000048240) #15	CEP72 (ENSPTRG00000016685) #14	SLC9A3 (ENSPTRG00000016682) #13	ENSPTRG00000050611	EXOC3 (ENSPTRG00000016680) #12	ENSPTRG00000038919	ENSPTRG00000043303	PDCD6 (ENSPTRG00000028788) #11	SDHA (ENSPTRG00000016677) #9	CCDC127 (ENSPTRG00000016674) #8
Gorilla	MODERN SPECIES	8	CCDC127 (ENSGGOG00000002664) #8	ENSGGOG00000037863	ENSGGOG00000022307	AHRR (ENSGGOG00000013694) #11	EXOC3 (ENSGGOG00000013711) #12	ENSGGOG00000013795	SLC9A3 (ENSGGOG00000013801) #13	CEP72 (ENSGGOG00000010622) #14	TPPP (ENSGGOG00000000348) #15	ZDHHC11B (ENSGGOG00000000349) #16	ENSGGOG00000022375 #17	BRD9 (ENSGGOG00000034974) #18	ENSGGOG00000011642 #19	NKD2 (ENSGGOG00000004478) #20	SLC12A7 (ENSGGOG00000009629) #21	SLC6A19 (ENSGGOG00000007544) #22	ENSGGOG00000038696 #23	TERT (ENSGGOG00000002607) #24	CLPTM1L (ENSGGOG00000015622) #25	SLC6A3 (ENSGGOG00000015631) #26	LPCAT1 (ENSGGOG00000015639) #27	ENSGGOG00000016949 ##28	NDUFS6 (ENSGGOG00000016951) #29	ENSGGOG00000039292 #30	IRX2 (ENSGGOG00000015712) #31	ENSGGOG00000015708	ENSGGOG00000040574	ENSGGOG00000042850 #32	ENSGGOG00000042745 #32	ENSGGOG00000039993	ADAMTS16 (ENSGGOG00000014865) #33
Orangutan	MODERN SPECIES	18	SDHA (ENSPPYG00000015298) #9	PDCD6 (ENSPPYG00000015299) #10	ENSPPYG00000041521 #11	ENSPPYG00000033507 #11	ENSPPYG00000033712	EXOC3 (ENSPPYG00000015301) #12	ENSPPYG00000031699	SLC9A3 (ENSPPYG00000015303) #13	CEP72 (ENSPPYG00000015304) #14	TPPP (ENSPPYG00000015305) #15	ENSPPYG00000015307 #17	BRD9 (ENSPPYG00000015308) #18	TRIP13 (ENSPPYG00000015309) #19	NKD2 (ENSPPYG00000015311) #20	SLC12A7 (ENSPPYG00000015312) #21	SLC6A19 (ENSPPYG00000015313) #22	SLC6A18 (ENSPPYG00000015314) #23	ENSPPYG00000015315 #24	ENSPPYG00000039637 #24	CLPTM1L (ENSPPYG00000015316) #25	SLC6A3 (ENSPPYG00000015318) #26	LPCAT1 (ENSPPYG00000015319) #27	ENSPPYG00000031434	MRPL36 (ENSPPYG00000015322) #28	ENSPPYG00000015323 #29	IRX4 (ENSPPYG00000015324) #30	IRX2 (ENSPPYG00000015325) #31	ENSPPYG00000015326	ENSPPYG00000015327 #32	ADAMTS16 (ENSPPYG00000015328) #33	ICE1 (ENSPPYG00000015329) #34
Gibbon	MODERN SPECIES	21				PLEKHG4B (ENSNLEG00000010753)	ENSNLEG00000010759 #7	CCDC127 (ENSNLEG00000033464) #8	AHRR (ENSNLEG00000010815) #11	EXOC3 (ENSNLEG00000010866) #12	SLC9A3 (ENSNLEG00000010872) #13	CEP72 (ENSNLEG00000010880) #14	ENSNLEG00000035791 #17	BRD9 (ENSNLEG00000010924) #18	TRIP13 (ENSNLEG00000010974) #19	ENSNLEG00000011012 #20	SLC12A7 (ENSNLEG00000011016) #21	SLC6A19 (ENSNLEG00000026638) #22	SLC6A18 (ENSNLEG00000011105) #23	TERT (ENSNLEG00000011118) #24	CLPTM1L (ENSNLEG00000011133) #25	SLC6A3 (ENSNLEG00000011157) #26	LPCAT1 (ENSNLEG00000011167) #27	MRPL36 (ENSNLEG00000011197) #28	ENSNLEG00000011199 #29	ENSNLEG00000011213 #30	IRX2 (ENSNLEG00000011219) #31	ENSNLEG00000011229	ENSNLEG00000027652	ADAMTS16 (ENSNLEG00000011241) #33	ICE1 (ENSNLEG00000011296) #34	MED10 (ENSNLEG00000034999) #35	NSUN2 (ENSNLEG00000011344) #37
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.a ##9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.a ##9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.a ##9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00960000188468	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33	ENSGT00950000183199.b #34
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00390000015775 #29	ENSGT00390000010866 #28	ENSGT00960000188468	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00910000144277.b.b.a.a.b ##9	ENSGT00390000008818 #8	ENSGT01030000234531.C #7	ENSGT00940000162507.A
Cercopithecinae_d	ANCESTRAL SPECIES	193											ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00910000144277.b.b.a.a.b ##9	ENSGT00390000008818 #8	ENSGT01030000234531.C #7	ENSGT00940000162507.A
Drill	MODERN SPECIES	1434											ENSMLEG00000032658 #17	BRD9 (ENSMLEG00000033210) #18	TRIP13 (ENSMLEG00000036069) #19	NKD2 (ENSMLEG00000036751) #20	SLC12A7 (ENSMLEG00000001781) #21	SLC6A19 (ENSMLEG00000032607) #22	SLC6A18 (ENSMLEG00000023403) #23	ENSMLEG00000031745 #24	CLPTM1L (ENSMLEG00000038799) #25	SLC6A3 (ENSMLEG00000035108) #26	ENSMLEG00000026613 #27	ENSMLEG00000039044 ##9	CCDC127 (ENSMLEG00000000748) #8
Sooty mangabey	MODERN SPECIES	331												BRD9 (ENSCATG00000020812) #18	TRIP13 (ENSCATG00000029566) #19	NKD2 (ENSCATG00000034477) #20	SLC12A7 (ENSCATG00000038088) #21	SLC6A19 (ENSCATG00000036906) #22	TERT (ENSCATG00000036594) #24	CLPTM1L (ENSCATG00000030496) #25	SLC6A3 (ENSCATG00000003841) #26	LPCAT1 (ENSCATG00000034258) #27	ENSCATG00000036041 ##9
Olive baboon	MODERN SPECIES	15	MED10 (ENSPANG00000016714) #35	ICE1 (ENSPANG00000050694) #34	ADAMTS16 (ENSPANG00000014911) #33	IRX1 (ENSPANG00000019076) #32	ENSPANG00000004028	IRX2 (ENSPANG00000003730) #31	ENSPANG00000039393	IRX4 (ENSPANG00000014386) #30	NDUFS6 (ENSPANG00000021407) #29	MRPL36 (ENSPANG00000046315) #28	ENSPANG00000023865	BRD9 (ENSPANG00000004217) #18	TRIP13 (ENSPANG00000020838) #19	NKD2 (ENSPANG00000012309) #20	SLC12A7 (ENSPANG00000025613) #21	SLC6A19 (ENSPANG00000012179) #22	SLC6A18 (ENSPANG00000014913) #23	TERT (ENSPANG00000026074) #24	CLPTM1L (ENSPANG00000007000) #25	SLC6A3 (ENSPANG00000014160) #26	LPCAT1 (ENSPANG00000014387) #27
Macaca	ANCESTRAL SPECIES	7	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.a ##9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00960000188468	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33
Pig-tailed macaque	MODERN SPECIES	330											ENSMNEG00000031215 #17	BRD9 (ENSMNEG00000027548) #18	TRIP13 (ENSMNEG00000009697) #19	NKD2 (ENSMNEG00000005782) #20	SLC12A7 (ENSMNEG00000002426) #21	SLC6A19 (ENSMNEG00000000294) #22	SLC6A18 (ENSMNEG00000035364) #23	TERT (ENSMNEG00000041254) #24	CLPTM1L (ENSMNEG00000038901) #25	SLC6A3 (ENSMNEG00000033539) #26	LPCAT1 (ENSMNEG00000031253) #27	ENSMNEG00000028348 ##9	CCDC127 (ENSMNEG00000043314) #8	LRRC14B (ENSMNEG00000042735) #7	PLEKHG4B (ENSMNEG00000032213)
Macaca_a	ANCESTRAL SPECIES	8	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277.a ##9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.n #17	ENSGT00940000161608.m #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00960000188468	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT01100000263493.a.b.a.b.a.b.a.a.a.a.b	ENSGT00940000160429 #32	ENSGT00910000147015	ENSGT00940000159433 #33
Crab-eating macaque	MODERN SPECIES	16	CCDC127 (ENSMFAG00000033953) #8	ENSMFAG00000010720 ##9	PDCD6 (ENSMFAG00000060093) #10	ENSMFAG00000060094 #11	AHRR (ENSMFAG00000050747) #11	EXOC3 (ENSMFAG00000029713) #12	SLC9A3 (ENSMFAG00000003512) #13	CEP72 (ENSMFAG00000032507) #14	ENSMFAG00000003548 #15	ENSMFAG00000053545 #17	ENSMFAG00000039221 #17	BRD9 (ENSMFAG00000040715) #18	TRIP13 (ENSMFAG00000003891) #19	NKD2 (ENSMFAG00000046329) #20	SLC12A7 (ENSMFAG00000027549) #21	SLC6A19 (ENSMFAG00000031540) #22	SLC6A18 (ENSMFAG00000029794) #23	TERT (ENSMFAG00000033142) #24	CLPTM1L (ENSMFAG00000039815) #25	ENSMFAG00000065048	SLC6A3 (ENSMFAG00000003977) #26	ENSMFAG00000064340 ##9	ENSMFAG00000047980	ENSMFAG00000049680 #28	NDUFS6 (ENSMFAG00000032708) #29	IRX4 (ENSMFAG00000044841) #30	IRX2 (ENSMFAG00000064595) #31	ENSMFAG00000047364	ENSMFAG00000055380	IRX1 (ENSMFAG00000001989) #32	ENSMFAG00000052395
Rhesus	MODERN SPECIES	16		PLEKHG4B (ENSMMUG00000064521)	LRRC14B (ENSMMUG00000052713) #7	ENSMMUG00000058997	CCDC127 (ENSMMUG00000063025) #8	SDHA (ENSMMUG00000014452) ##9	AHRR (ENSMMUG00000000752) #11	EXOC3 (ENSMMUG00000003787) #12	SLC9A3 (ENSMMUG00000003789) #13	CEP72 (ENSMMUG00000003791) #14	TPPP (ENSMMUG00000061096) #15	BRD9 (ENSMMUG00000014738) #18	TRIP13 (ENSMMUG00000014740) #19	NKD2 (ENSMMUG00000019439) #20	SLC12A7 (ENSMMUG00000019441) #21	SLC6A19 (ENSMMUG00000010935) #22	SLC6A18 (ENSMMUG00000010938) #23	TERT (ENSMMUG00000010940) #24	CLPTM1L (ENSMMUG00000005193) #25	SLC6A3 (ENSMMUG00000005198) #26	LPCAT1 (ENSMMUG00000005199) #27	ENSMMUG00000059497 ##9	MRPL36 (ENSMMUG00000004451) #28	NDUFS6 (ENSMMUG00000004447) #29	IRX4 (ENSMMUG00000004220) #30	ENSMMUG00000057427	IRX2 (ENSMMUG00000005802) #31	ENSMMUG00000015889	ENSMMUG00000050148	IRX1 (ENSMMUG00000002613) #32	ADAMTS16 (ENSMMUG00000019205) #33
Vervet Monkey	MODERN SPECIES	23	LRRC14B (ENSCSAG00000017440) #7	CCDC127 (ENSCSAG00000017439) #8	PDCD6 (ENSCSAG00000017437) #10	AHRR (ENSCSAG00000017432) #11	EXOC3 (ENSCSAG00000017428) #12	SLC9A3 (ENSCSAG00000017425) #13	CEP72 (ENSCSAG00000017424) #14	TPPP (ENSCSAG00000017421) #15	ENSCSAG00000017419	ENSCSAG00000017418 #17	BRD9 (ENSCSAG00000017415) #18	TRIP13 (ENSCSAG00000017410) #19	ENSCSAG00000017408	NKD2 (ENSCSAG00000017405) #20	SLC12A7 (ENSCSAG00000017399) #21	SLC6A19 (ENSCSAG00000017393) #22	SLC6A18 (ENSCSAG00000017392) #23	TERT (ENSCSAG00000017381) #24	CLPTM1L (ENSCSAG00000017368) #25	SLC6A3 (ENSCSAG00000017367) #26	LPCAT1 (ENSCSAG00000017363) #27	MRPL36 (ENSCSAG00000018986) #28	NDUFS6 (ENSCSAG00000017360) #29	IRX4 (ENSCSAG00000017357) #30	IRX2 (ENSCSAG00000017353) #31	ENSCSAG00000017351	IRX1 (ENSCSAG00000017349) #32	ADAMTS16 (ENSCSAG00000017347) #33	ICE1 (ENSCSAG00000017344) #34	MED10 (ENSCSAG00000017342) #35	UBE2QL1 (ENSCSAG00000017341) #36
Rhinopithecus	ANCESTRAL SPECIES	385												ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00910000144277.a ##9	ENSGT00390000008818 #8	ENSGT01030000234531.C #7	ENSGT00940000162507.A
Golden snub-nosed monkey	MODERN SPECIES	1601												BRD9 (ENSRROG00000036960) #18	TRIP13 (ENSRROG00000042943) #19	NKD2 (ENSRROG00000045048) #20	SLC12A7 (ENSRROG00000045108) #21	SLC6A19 (ENSRROG00000037264) #22	SLC6A18 (ENSRROG00000033156) #23	TERT (ENSRROG00000032554) #24	CLPTM1L (ENSRROG00000030446) #25	SLC6A3 (ENSRROG00000031315) #26	LPCAT1 (ENSRROG00000032009) #27	ENSRROG00000038083 ##9	CCDC127 (ENSRROG00000035879) #8	LRRC14B (ENSRROG00000029577) #7	PLEKHG4B (ENSRROG00000043871)
Black snub-nosed monkey	MODERN SPECIES	1467												BRD9 (ENSRBIG00000042384) #18	TRIP13 (ENSRBIG00000028516) #19	NKD2 (ENSRBIG00000029861) #20	SLC12A7 (ENSRBIG00000030721) #21	SLC6A19 (ENSRBIG00000038147) #22	SLC6A18 (ENSRBIG00000034395) #23	TERT (ENSRBIG00000032252) #24	CLPTM1L (ENSRBIG00000029329) #25	SLC6A3 (ENSRBIG00000031678) #26	LPCAT1 (ENSRBIG00000042380) #27
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Marmoset	MODERN SPECIES	11	PDCD6 (ENSCJAG00000017613) #10	ENSCJAG00000066243	AHRR (ENSCJAG00000061622) #11	ENSCJAG00000058861	EXOC3 (ENSCJAG00000017659) #12	ENSCJAG00000081609	SLC9A3 (ENSCJAG00000017670) #13	ENSCJAG00000084490	CEP72 (ENSCJAG00000015720) #14	ENSCJAG00000081432 #15	ENSCJAG00000018670	BRD9 (ENSCJAG00000003867) #18	TRIP13 (ENSCJAG00000003849) #19	NKD2 (ENSCJAG00000043259) #20	SLC12A7 (ENSCJAG00000077601) #21	SLC6A19 (ENSCJAG00000011196) #22	SLC6A18 (ENSCJAG00000036709) #23	TERT (ENSCJAG00000048026) #24	ENSCJAG00000047667 #25	SLC6A3 (ENSCJAG00000011089) #26	LPCAT1 (ENSCJAG00000011062) #27	ENSCJAG00000083587 #28	ENSCJAG00000075297 #29	IRX4 (ENSCJAG00000009376) #30	IRX2 (ENSCJAG00000008516) #31	IRX1 (ENSCJAG00000039020) #32	ENSCJAG00000086287	ADAMTS16 (ENSCJAG00000008588) #33	ICE1 (ENSCJAG00000008637) #34	MED10 (ENSCJAG00000008674) #35	UBE2QL1 (ENSCJAG00000008686) #36
Cebidae_a	ANCESTRAL SPECIES	82	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37	ENSGT00950000182886.b.b
Capuchin	MODERN SPECIES	565										TPPP (ENSCCAG00000025814) #15	ENSCCAG00000023315 #17	BRD9 (ENSCCAG00000030358) #18	TRIP13 (ENSCCAG00000036398) #19	NKD2 (ENSCCAG00000024905) #20	SLC12A7 (ENSCCAG00000026806) #21	SLC6A19 (ENSCCAG00000030671) #22	SLC6A18 (ENSCCAG00000033077) #23	TERT (ENSCCAG00000030949) #24	CLPTM1L (ENSCCAG00000033112) #25	SLC6A3 (ENSCCAG00000023820) #26	LPCAT1 (ENSCCAG00000020616) #27	NDUFS6 (ENSCCAG00000022747) #29	IRX4 (ENSCCAG00000026621) #30
Bolivian squirrel monkey	MODERN SPECIES	92	PLEKHG4B (ENSSBOG00000031830)	LRRC14B (ENSSBOG00000030057) #7	CCDC127 (ENSSBOG00000031596) #8	SDHA (ENSSBOG00000024262) #9	AHRR (ENSSBOG00000024176) #11	EXOC3 (ENSSBOG00000030936) #12	SLC9A3 (ENSSBOG00000030362) #13	ENSSBOG00000033295	CEP72 (ENSSBOG00000024985) #14	TPPP (ENSSBOG00000026704) #15	ENSSBOG00000025272 #17	BRD9 (ENSSBOG00000003529) #18	TRIP13 (ENSSBOG00000026544) #19	NKD2 (ENSSBOG00000027973) #20	SLC12A7 (ENSSBOG00000021997) #21	SLC6A19 (ENSSBOG00000024736) #22	SLC6A18 (ENSSBOG00000025040) #23	TERT (ENSSBOG00000030569) #24	CLPTM1L (ENSSBOG00000027261) #25	SLC6A3 (ENSSBOG00000018794) #26	LPCAT1 (ENSSBOG00000021403) #27	NDUFS6 (ENSSBOG00000029679) #29	IRX4 (ENSSBOG00000035465) #30	IRX1 (ENSSBOG00000031823) #32	ADAMTS16 (ENSSBOG00000031786) #33	ICE1 (ENSSBOG00000018773) #34	MED10 (ENSSBOG00000030219) #35	UBE2QL1 (ENSSBOG00000025393) #36	NSUN2 (ENSSBOG00000035262) #37	SRD5A1 (ENSSBOG00000032790)	TENT4A (ENSSBOG00000035549)
Mas night monkey	MODERN SPECIES	837								AHRR (ENSANAG00000023430) #11	EXOC3 (ENSANAG00000017201) #12	SLC9A3 (ENSANAG00000032397) #13	TPPP (ENSANAG00000024282) #15	BRD9 (ENSANAG00000025731) #18	TRIP13 (ENSANAG00000029679) #19	NKD2 (ENSANAG00000018792) #20	SLC12A7 (ENSANAG00000033651) #21	SLC6A19 (ENSANAG00000030219) #22	SLC6A18 (ENSANAG00000031192) #23	TERT (ENSANAG00000032128) #24	CLPTM1L (ENSANAG00000027142) #25	SLC6A3 (ENSANAG00000027816) #26	LPCAT1 (ENSANAG00000027756) #27	NDUFS6 (ENSANAG00000009591) #29	IRX4 (ENSANAG00000023256) #30	IRX2 (ENSANAG00000023050) #31	ENSANAG00000036927	ENSANAG00000019516	IRX1 (ENSANAG00000032866) #32	ADAMTS16 (ENSANAG00000025438) #33	ICE1 (ENSANAG00000023554) #34	ENSANAG00000018766	MED10 (ENSANAG00000030701) #35
Tarsier	MODERN SPECIES	4896																SLC6A19 (ENSTSYG00000036580) #22	SLC6A18 (ENSTSYG00000031900) #23
Strepsirrhini	ANCESTRAL SPECIES	5		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Lemuriformes	ANCESTRAL SPECIES	47			ENSGT00940000153875.c #15	ENSGT00530000063884.a #14	ENSGT00940000158616 #13	ENSGT01030000234613.a.a #12	ENSGT00940000154486.a.b #11	ENSGT00940000160982 #10	ENSGT00910000144277 #9	ENSGT00390000008818 #8	ENSGT01030000234531.C #7	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Mouse lemur	MODERN SPECIES	3	ENSMICG00000032729	TPPP (ENSMICG00000042217) #15	CEP72 (ENSMICG00000041644) #14	SLC9A3 (ENSMICG00000017074) #13	EXOC3 (ENSMICG00000001847) #12	AHRR (ENSMICG00000047925) #11	ENSMICG00000030881	PDCD6 (ENSMICG00000026451) #10	SDHA (ENSMICG00000008421) #9	CCDC127 (ENSMICG00000008417) #8	LRRC14B (ENSMICG00000040725) #7	BRD9 (ENSMICG00000004306) #18	TRIP13 (ENSMICG00000028604) #19	NKD2 (ENSMICG00000029997) #20	SLC12A7 (ENSMICG00000028719) #21	SLC6A19 (ENSMICG00000033849) #22	SLC6A18 (ENSMICG00000010877) #23	TERT (ENSMICG00000010883) #24	CLPTM1L (ENSMICG00000000301) #25	SLC6A3 (ENSMICG00000017612) #26	LPCAT1 (ENSMICG00000032744) #27	NDUFS6 (ENSMICG00000014038) #29	IRX4 (ENSMICG00000029233) #30	IRX2 (ENSMICG00000013531) #31	IRX1 (ENSMICG00000011730) #32	ADAMTS16 (ENSMICG00000010718) #33	ICE1 (ENSMICG00000028221) #34	MED10 (ENSMICG00000013856) #35	UBE2QL1 (ENSMICG00000042851) #36	NSUN2 (ENSMICG00000016549) #37	SRD5A1 (ENSMICG00000016557)
Lemuriformes_a	ANCESTRAL SPECIES	135			ENSGT00940000153875.c #15	ENSGT00530000063884.a #14	ENSGT00940000158616 #13	ENSGT01030000234613.a.a #12	ENSGT00940000154486.a.b #11	ENSGT00940000160982 #10	ENSGT00910000144277 #9	ENSGT00390000008818 #8	ENSGT01030000234531.C #7	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Coquerels sifaka	MODERN SPECIES	948													ENSPCOG00000008162	NKD2 (ENSPCOG00000022727) #20	SLC12A7 (ENSPCOG00000022808) #21	SLC6A19 (ENSPCOG00000002620) #22	SLC6A18 (ENSPCOG00000013868) #23	ENSPCOG00000008503 #24	ENSPCOG00000024942 #24	CLPTM1L (ENSPCOG00000028163) #25	SLC6A3 (ENSPCOG00000014041) #26
Greater bamboo lemur	MODERN SPECIES	11								ENSPSMG00000010938	SDHA (ENSPSMG00000010830) #9	CCDC127 (ENSPSMG00000010615) #8	LRRC14B (ENSPSMG00000010614) #7	BRD9 (ENSPSMG00000010563) #18	ENSPSMG00000010472 #19	NKD2 (ENSPSMG00000010442) #20	SLC12A7 (ENSPSMG00000010422) #21	SLC6A19 (ENSPSMG00000010402) #22	SLC6A18 (ENSPSMG00000010391) #23	ENSPSMG00000010376 #24	ENSPSMG00000010372	CLPTM1L (ENSPSMG00000010152) #25	SLC6A3 (ENSPSMG00000009991) #26	LPCAT1 (ENSPSMG00000009909) #27	NDUFS6 (ENSPSMG00000009866) #29	IRX4 (ENSPSMG00000009857) #30	IRX2 (ENSPSMG00000009849) #31	IRX1 (ENSPSMG00000009843) #32	ADAMTS16 (ENSPSMG00000009836) #33	ICE1 (ENSPSMG00000009793) #34	MED10 (ENSPSMG00000009767) #35	UBE2QL1 (ENSPSMG00000009761) #36	NSUN2 (ENSPSMG00000009727) #37
Bushbaby	MODERN SPECIES	341		LRRC14B (ENSOGAG00000029649) #7	CCDC127 (ENSOGAG00000010354) #8	SDHA (ENSOGAG00000010357) #9	PDCD6 (ENSOGAG00000032623) #10	AHRR (ENSOGAG00000010416) #11	EXOC3 (ENSOGAG00000008272) #12	SLC9A3 (ENSOGAG00000009995) #13	CEP72 (ENSOGAG00000008802) #14	TPPP (ENSOGAG00000008805) #15	ENSOGAG00000004014 #17	BRD9 (ENSOGAG00000008809) #18	TRIP13 (ENSOGAG00000008813) #19	NKD2 (ENSOGAG00000031525) #20	SLC12A7 (ENSOGAG00000012359) #21	SLC6A19 (ENSOGAG00000013166) #22	SLC6A18 (ENSOGAG00000013173) #23	TERT (ENSOGAG00000026171) #24	CLPTM1L (ENSOGAG00000013183) #25	SLC6A3 (ENSOGAG00000000448) #26	LPCAT1 (ENSOGAG00000000452) #27	MRPL36 (ENSOGAG00000032891) #28	NDUFS6 (ENSOGAG00000001319) #29	IRX4 (ENSOGAG00000030171) #30	IRX2 (ENSOGAG00000012910) #31
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Tree shrew	MODERN SPECIES	3970																ENSTBEG00000013799 #22
Glires	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Rodentia	ANCESTRAL SPECIES	7		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Rodentia_A	ANCESTRAL SPECIES	7		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Sciuridae	ANCESTRAL SPECIES	32		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Marmotini	ANCESTRAL SPECIES	75		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Marmotini_b	ANCESTRAL SPECIES	181		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30
Arctic ground squirrel	MODERN SPECIES	720																SLC6A19 (ENSUPAG00010011277) #22	SLC6A18 (ENSUPAG00010011288) #23	TERT (ENSUPAG00010011341) #24	CLPTM1L (ENSUPAG00010011411) #25	SLC6A3 (ENSUPAG00010011424) #26	LPCAT1 (ENSUPAG00010011438) #27	ENSUPAG00010011481 #28	ENSUPAG00010011486 #29	IRX4 (ENSUPAG00010011496) #30
Squirrel	MODERN SPECIES	415	ENSSTOG00000031540	LRRC14B (ENSSTOG00000008872) #7	CCDC127 (ENSSTOG00000025952) #8	SDHA (ENSSTOG00000003740) #9	PDCD6 (ENSSTOG00000028872) #10	ENSSTOG00000019733 #11	EXOC3 (ENSSTOG00000002915) #12	SLC9A3 (ENSSTOG00000022373) #13	CEP72 (ENSSTOG00000009770) #14	TPPP (ENSSTOG00000028319) #15	ENSSTOG00000023956 #17	BRD9 (ENSSTOG00000026869) #18	TRIP13 (ENSSTOG00000016032) #19	NKD2 (ENSSTOG00000025001) #20	SLC12A7 (ENSSTOG00000027230) #21	SLC6A19 (ENSSTOG00000014810) #22	SLC6A18 (ENSSTOG00000024668) #23	TERT (ENSSTOG00000023072) #24	CLPTM1L (ENSSTOG00000004683) #25	SLC6A3 (ENSSTOG00000025968) #26	LPCAT1 (ENSSTOG00000027644) #27	ENSSTOG00000031957 #28	NDUFS6 (ENSSTOG00000003715) #29	IRX4 (ENSSTOG00000019849) #30
Alpin marmot	MODERN SPECIES	27	LRRC14B (ENSMMMG00000016008) #7	CCDC127 (ENSMMMG00000016016) #8	SDHA (ENSMMMG00000016022) #9	PDCD6 (ENSMMMG00000016043) #10	AHRR (ENSMMMG00000016051) #11	EXOC3 (ENSMMMG00000016061) #12	SLC9A3 (ENSMMMG00000016064) #13	CEP72 (ENSMMMG00000016131) #14	TPPP (ENSMMMG00000016142) #15	ENSMMMG00000016146	ENSMMMG00000016163 #17	BRD9 (ENSMMMG00000016174) #18	TRIP13 (ENSMMMG00000016193) #19	NKD2 (ENSMMMG00000016197) #20	SLC12A7 (ENSMMMG00000016228) #21	SLC6A19 (ENSMMMG00000016250) #22	SLC6A18 (ENSMMMG00000016257) #23	TERT (ENSMMMG00000016292) #24	CLPTM1L (ENSMMMG00000016350) #25	SLC6A3 (ENSMMMG00000016359) #26	LPCAT1 (ENSMMMG00000016379) #27	ENSMMMG00000016387 #28	NDUFS6 (ENSMMMG00000016391) #29	IRX4 (ENSMMMG00000016398) #30	IRX2 (ENSMMMG00000016418) #31	IRX1 (ENSMMMG00000016428) #32	ADAMTS16 (ENSMMMG00000016445) #33	ICE1 (ENSMMMG00000016467) #34	MED10 (ENSMMMG00000016704) #35	UBE2QL1 (ENSMMMG00000016713) #36	NSUN2 (ENSMMMG00000016722) #37
Eurasian red squirrel	MODERN SPECIES	15	LRRC14B (ENSSVLG00005009009) #7	CCDC127 (ENSSVLG00005008989) #8	SDHA (ENSSVLG00005008902) #9	ENSSVLG00005008792 #10	ENSSVLG00005008762 #11	ENSSVLG00005008693 #11	EXOC3 (ENSSVLG00005008659) #12	SLC9A3 (ENSSVLG00005008403) #13	CEP72 (ENSSVLG00005008307) #14	TPPP (ENSSVLG00005008280) #15	ENSSVLG00005008236 #17	BRD9 (ENSSVLG00005008077) #18	TRIP13 (ENSSVLG00005008053) #19	NKD2 (ENSSVLG00005007994) #20	SLC12A7 (ENSSVLG00005007858) #21	SLC6A19 (ENSSVLG00005007759) #22	SLC6A18 (ENSSVLG00005007675) #23	TERT (ENSSVLG00005007516) #24	CLPTM1L (ENSSVLG00005007406) #25	SLC6A3 (ENSSVLG00005007330) #26	ENSSVLG00005007261 #27	ENSSVLG00005007224 #28	NDUFS6 (ENSSVLG00005007209) #29	IRX4 (ENSSVLG00005007188) #30	IRX2 (ENSSVLG00005007175) #31	ENSSVLG00005007165	IRX1 (ENSSVLG00005007138) #32	ENSSVLG00005007115	ADAMTS16 (ENSSVLG00005006885) #33	ICE1 (ENSSVLG00005006497) #34	MED10 (ENSSVLG00005006416) #35
Hystricomorpha	ANCESTRAL SPECIES	31		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Hystricomorpha_a	ANCESTRAL SPECIES	29		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	60		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Long-tailed chinchilla	MODERN SPECIES	211		LRRC14B (ENSCLAG00000006094) #7	CCDC127 (ENSCLAG00000006232) #8	SDHA (ENSCLAG00000002734) #9	PDCD6 (ENSCLAG00000003275) #10	AHRR (ENSCLAG00000003468) #11	EXOC3 (ENSCLAG00000003834) #12	SLC9A3 (ENSCLAG00000004296) #13	CEP72 (ENSCLAG00000004221) #14	TPPP (ENSCLAG00000005029) #15	ENSCLAG00000005177 #17	BRD9 (ENSCLAG00000005681) #18	TRIP13 (ENSCLAG00000003450) #19	NKD2 (ENSCLAG00000003738) #20	SLC12A7 (ENSCLAG00000004556) #21	SLC6A19 (ENSCLAG00000005488) #22	SLC6A18 (ENSCLAG00000004695) #23	TERT (ENSCLAG00000006143) #24	CLPTM1L (ENSCLAG00000006371) #25	SLC6A3 (ENSCLAG00000006703) #26	LPCAT1 (ENSCLAG00000007581) #27	NDUFS6 (ENSCLAG00000007890) #29	IRX4 (ENSCLAG00000013236) #30	IRX2 (ENSCLAG00000010848) #31	IRX1 (ENSCLAG00000011133) #32	ADAMTS16 (ENSCLAG00000011357) #33	ICE1 (ENSCLAG00000006995) #34	MED10 (ENSCLAG00000003135) #35	NSUN2 (ENSCLAG00000003188) #37	SRD5A1 (ENSCLAG00000003581)	TENT4A (ENSCLAG00000003733)
Degu	MODERN SPECIES	49	LRRC14B (ENSODEG00000018256) #7	CCDC127 (ENSODEG00000018314) #8	SDHA (ENSODEG00000018317) #9	PDCD6 (ENSODEG00000018264) #10	ENSODEG00000018234	AHRR (ENSODEG00000018258) #11	EXOC3 (ENSODEG00000018394) #12	SLC9A3 (ENSODEG00000018282) #13	CEP72 (ENSODEG00000018348) #14	TPPP (ENSODEG00000018262) #15	ENSODEG00000018341 #17	ENSODEG00000018289 #18	TRIP13 (ENSODEG00000018401) #19	NKD2 (ENSODEG00000018297) #20	SLC12A7 (ENSODEG00000018252) #21	SLC6A19 (ENSODEG00000018254) #22	SLC6A18 (ENSODEG00000018351) #23	TERT (ENSODEG00000018274) #24	CLPTM1L (ENSODEG00000018435) #25	SLC6A3 (ENSODEG00000018337) #26	LPCAT1 (ENSODEG00000018339) #27	ENSODEG00000018308 #28	NDUFS6 (ENSODEG00000018267) #29	IRX4 (ENSODEG00000018434) #30	IRX2 (ENSODEG00000018250) #31	IRX1 (ENSODEG00000018349) #32	ADAMTS16 (ENSODEG00000018405) #33	ENSODEG00000018278 #34	ENSODEG00000018433	MED10 (ENSODEG00000018285) #35	UBE2QL1 (ENSODEG00000018284) #36
Guinea pig	MODERN SPECIES	150	ENSCPOG00000032688	LRRC14B (ENSCPOG00000006132) #7	CCDC127 (ENSCPOG00000030881) #8	SDHA (ENSCPOG00000008921) #9	PDCD6 (ENSCPOG00000024481) #10	AHRR (ENSCPOG00000005984) #11	EXOC3 (ENSCPOG00000005988) #12	SLC9A3 (ENSCPOG00000005992) #13	CEP72 (ENSCPOG00000008862) #14	TPPP (ENSCPOG00000035664) #15	ENSCPOG00000033864 #17	BRD9 (ENSCPOG00000004075) #18	TRIP13 (ENSCPOG00000004081) #19	NKD2 (ENSCPOG00000039687) #20	SLC12A7 (ENSCPOG00000006679) #21	SLC6A19 (ENSCPOG00000010563) #22	SLC6A18 (ENSCPOG00000010570) #23	TERT (ENSCPOG00000015559) #24	CLPTM1L (ENSCPOG00000007900) #25	SLC6A3 (ENSCPOG00000024044) #26	LPCAT1 (ENSCPOG00000038535) #27	MRPL36 (ENSCPOG00000039695) #28	NDUFS6 (ENSCPOG00000003772) #29	IRX4 (ENSCPOG00000023150) #30	IRX2 (ENSCPOG00000000858) #31	IRX1 (ENSCPOG00000021147) #32
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000039718	ENSHGLG00000018864 #7	ENSHGLG00000018579 #8	SDHA (ENSHGLG00000012160) #9	PDCD6 (ENSHGLG00000004728) #10	AHRR (ENSHGLG00000004877) #11	EXOC3 (ENSHGLG00000006821) #12	SLC9A3 (ENSHGLG00000008808) #13	TPPP (ENSHGLG00000046346) #15	ENSHGLG00000046861	ENSHGLG00000007391 #17	BRD9 (ENSHGLG00000008352) #18	TRIP13 (ENSHGLG00000009370) #19	ENSHGLG00000045939 #20	SLC12A7 (ENSHGLG00000003575) #21	SLC6A19 (ENSHGLG00000003886) #22	SLC6A18 (ENSHGLG00000005033) #23	ENSHGLG00000006828 #24	ENSHGLG00000049333	CLPTM1L (ENSHGLG00000007809) #25	ENSHGLG00000003913	SLC6A3 (ENSHGLG00000006047) #26	LPCAT1 (ENSHGLG00000003422) #27	ENSHGLG00000004189 #28	NDUFS6 (ENSHGLG00000004998) #29	ENSHGLG00000034949 #30	ENSHGLG00000038329	ENSHGLG00000049495	ENSHGLG00000036167	ENSHGLG00000010639	ENSHGLG00000044835
Rodentia_B	ANCESTRAL SPECIES	4		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Kangaroo rat	MODERN SPECIES	340	Prdm9 (ENSDORG00000001048)	Lrrc14b (ENSDORG00000001054) #7	Ccdc127 (ENSDORG00000023859) #8	Sdha (ENSDORG00000023147) #9	ENSDORG00000029717 #10	Ahrr (ENSDORG00000024523) #11	Exoc3 (ENSDORG00000007060) #12	Slc9a3 (ENSDORG00000024087) #13	Cep72 (ENSDORG00000014412) #14	Tppp (ENSDORG00000000450) #15	Zdhhc11 (ENSDORG00000003485) #17	Brd9 (ENSDORG00000003483) #18	Trip13 (ENSDORG00000003482) #19	Nkd2 (ENSDORG00000012275) #20	Slc12a7 (ENSDORG00000012278) #21	Slc6a19 (ENSDORG00000029059) #22	Slc6a18 (ENSDORG00000011176) #23	Clptm1l (ENSDORG00000010439) #25	Slc6a3 (ENSDORG00000001501) #26	Lpcat1 (ENSDORG00000012382) #27	Ndufs6 (ENSDORG00000024296) #29	Irx4 (ENSDORG00000015537) #30	Adamts16 (ENSDORG00000013854) #33	ENSDORG00000025435 #34	ENSDORG00000008413 #35	Ube2ql1 (ENSDORG00000026589) #36	Nsun2 (ENSDORG00000010247) #37	Srd5a1 (ENSDORG00000010248)	Tent4a (ENSDORG00000023216)	Adcy2 (ENSDORG00000010924)	Cfap90 (ENSDORG00000013670)
Myomorpha	ANCESTRAL SPECIES	5		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Lesser Egyptian jerboa	MODERN SPECIES	128	Pik3r1 (ENSJJAG00000020326)	Slc30a5 (ENSJJAG00000000942)	Ccnb1 (ENSJJAG00000007280)	Hsd17b4 (ENSJJAG00000013321)	ENSJJAG00000015095	ENSJJAG00000017113	ENSJJAG00000020042	Slc9a3 (ENSJJAG00000020607) #13	Cep72 (ENSJJAG00000008837) #14	Tppp (ENSJJAG00000010294) #15	Zdhhc11 (ENSJJAG00000011440) #17	Brd9 (ENSJJAG00000001706) #18	Trip13 (ENSJJAG00000016963) #19	Nkd2 (ENSJJAG00000022067) #20	Slc12a7 (ENSJJAG00000013362) #21	Slc6a19 (ENSJJAG00000013014) #22	Slc6a18 (ENSJJAG00000013974) #23	Tert (ENSJJAG00000015110) #24	Clptm1l (ENSJJAG00000017514) #25	Slc6a3 (ENSJJAG00000018113) #26	Lpcat1 (ENSJJAG00000004764) #27	Mrpl36 (ENSJJAG00000017543) #28	Ndufs6 (ENSJJAG00000018200) #29	Irx4 (ENSJJAG00000000181) #30	Irx2 (ENSJJAG00000010684) #31	ENSJJAG00000012959	Irx1 (ENSJJAG00000021563) #32
Muroidea	ANCESTRAL SPECIES	4		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1637		ENSNGAG00000016954	Lrrc14b (ENSNGAG00000000023) #7	Ccdc127 (ENSNGAG00000001714) #8	Sdha (ENSNGAG00000005141) #9	Pdcd6 (ENSNGAG00000004643) #10	Ahrr (ENSNGAG00000007294) #11	Exoc3 (ENSNGAG00000014567) #12	Slc9a3 (ENSNGAG00000015393) #13	Tppp (ENSNGAG00000009996) #15	Zdhhc11 (ENSNGAG00000011093) #17	Brd9 (ENSNGAG00000001695) #18	Trip13 (ENSNGAG00000016476) #19	Nkd2 (ENSNGAG00000002099) #20	Slc12a7 (ENSNGAG00000012867) #21	Slc6a19 (ENSNGAG00000017071) #22	Slc6a18 (ENSNGAG00000000073) #23	Tert (ENSNGAG00000000359) #24	Clptm1l (ENSNGAG00000014230) #25	Slc6a3 (ENSNGAG00000010441) #26	Lpcat1 (ENSNGAG00000015191) #27	ENSNGAG00000016928	Mrpl36 (ENSNGAG00000000723) #28	Ndufs6 (ENSNGAG00000001134) #29	Irx4 (ENSNGAG00000001660) #30	Irx2 (ENSNGAG00000011270) #31	Irx1 (ENSNGAG00000014877) #32
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.v.b #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775.d.a #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Lrrc14b (ENSCGRG00001012753) #7	Ccdc127 (ENSCGRG00001012397) #8	Sdha (ENSCGRG00001000553) #9	Pdcd6 (ENSCGRG00001009329) #10	Ahrr (ENSCGRG00001007683) #11	Exoc3 (ENSCGRG00001012716) #12	Slc9a3 (ENSCGRG00001022559) #13	Cep72 (ENSCGRG00001003306) #14	Tppp (ENSCGRG00001013743) #15	Zdhhc11 (ENSCGRG00001008203) #17	Brd9 (ENSCGRG00001005749) #18	Trip13 (ENSCGRG00001003568) #19	Nkd2 (ENSCGRG00001013334) #20	Slc12a7 (ENSCGRG00001015337) #21	ENSCGRG00001012265	Slc6a19 (ENSCGRG00001011943) #22	Slc6a18 (ENSCGRG00001012926) #23	Tert (ENSCGRG00001012546) #24	Clptm1l (ENSCGRG00001016619) #25	Slc6a3 (ENSCGRG00001006359) #26	Lpcat1 (ENSCGRG00001005110) #27	Mrpl36 (ENSCGRG00001008138) #28	ENSCGRG00001016119 #29	Irx4 (ENSCGRG00001014881) #30	Irx2 (ENSCGRG00001014435) #31	ENSCGRG00001013677	Irx1 (ENSCGRG00001000951) #32	Adamts16 (ENSCGRG00001024673) #33	ENSCGRG00001024420 #34	ENSCGRG00001013263	MED10 (ENSCGRG00001014842) #35
Golden Hamster	MODERN SPECIES	619	ENSMAUG00000005436	Tmx3 (ENSMAUG00000020916)	Zfp72 (ENSMAUG00000020123)	Lrrc14b (ENSMAUG00000013534) #7	Ccdc127 (ENSMAUG00000019954) #8	Sdha (ENSMAUG00000020809) #9	ENSMAUG00000008435 #10	Ahrr (ENSMAUG00000017965) #11	Exoc3 (ENSMAUG00000021411) #12	Slc9a3 (ENSMAUG00000020856) #13	Cep72 (ENSMAUG00000004918) #14	Brd9 (ENSMAUG00000015050) #18	Trip13 (ENSMAUG00000018209) #19	Nkd2 (ENSMAUG00000011293) #20	Slc12a7 (ENSMAUG00000001535) #21	Slc6a19 (ENSMAUG00000021816) #22	Slc6a18 (ENSMAUG00000007818) #23	Tert (ENSMAUG00000008230) #24	Clptm1l (ENSMAUG00000011502) #25	Lpcat1 (ENSMAUG00000020192) #27	Ndufs6 (ENSMAUG00000011653) #29	Irx4 (ENSMAUG00000002904) #30	Irx2 (ENSMAUG00000014773) #31	ENSMAUG00000009392	Irx1 (ENSMAUG00000001495) #32	Adamts16 (ENSMAUG00000014925) #33	ENSMAUG00000008753 #34	ENSMAUG00000010296 #35	Ube2ql1 (ENSMAUG00000008423) #36	Nsun2 (ENSMAUG00000014207) #37	Srd5a1 (ENSMAUG00000020995)
Cricetidae_B	ANCESTRAL SPECIES	37	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.v.b #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Prairie vole	MODERN SPECIES	6	ENSMOCG00000000846	Lrrc14b (ENSMOCG00000015632) #7	Ccdc127 (ENSMOCG00000015017) #8	Sdha (ENSMOCG00000000203) #9	ENSMOCG00000020217 #10	Ahrr (ENSMOCG00000006297) #11	Exoc3 (ENSMOCG00000017441) #12	Slc9a3 (ENSMOCG00000016773) #13	Cep72 (ENSMOCG00000020226) #14	Tppp (ENSMOCG00000018815) #15	Zdhhc11 (ENSMOCG00000011165) #17	Brd9 (ENSMOCG00000012173) #18	Trip13 (ENSMOCG00000001629) #19	Nkd2 (ENSMOCG00000020604) #20	Slc12a7 (ENSMOCG00000005766) #21	Slc6a19 (ENSMOCG00000022361) #22	Slc6a18 (ENSMOCG00000014604) #23	Tert (ENSMOCG00000002105) #24	Clptm1l (ENSMOCG00000006930) #25	Slc6a3 (ENSMOCG00000000701) #26	Lpcat1 (ENSMOCG00000020107) #27	Mrpl36 (ENSMOCG00000004885) #28	Ndufs6 (ENSMOCG00000020730) #29	Irx4 (ENSMOCG00000003602) #30	Irx2 (ENSMOCG00000002016) #31	Irx1 (ENSMOCG00000001127) #32	Adamts16 (ENSMOCG00000006653) #33	ENSMOCG00000001781 #34	ENSMOCG00000016447	ENSMOCG00000012521 #35	ENSMOCG00000010244 #36
Northern American deer mouse	MODERN SPECIES	6	Zfp72 (ENSPEMG00000008140)	Lrrc14b (ENSPEMG00000030149) #7	Ccdc127 (ENSPEMG00000007618) #8	Sdha (ENSPEMG00000018520) #9	Pdcd6 (ENSPEMG00000008592) #10	Ahrr (ENSPEMG00000014987) #11	Exoc3 (ENSPEMG00000009178) #12	Slc9a3 (ENSPEMG00000013325) #13	Cep72 (ENSPEMG00000009656) #14	Tppp (ENSPEMG00000024974) #15	Zdhhc11 (ENSPEMG00000007387) #17	Brd9 (ENSPEMG00000000924) #18	Trip13 (ENSPEMG00000006165) #19	Nkd2 (ENSPEMG00000009852) #20	Slc12a7 (ENSPEMG00000009080) #21	Slc6a19 (ENSPEMG00000016690) #22	Slc6a18 (ENSPEMG00000008103) #23	Tert (ENSPEMG00000013643) #24	Clptm1l (ENSPEMG00000007565) #25	Slc6a3 (ENSPEMG00000017495) #26	Lpcat1 (ENSPEMG00000015897) #27	Mrpl36 (ENSPEMG00000006495) #28	Ndufs6 (ENSPEMG00000012127) #29	Irx4 (ENSPEMG00000007372) #30	Irx2 (ENSPEMG00000000903) #31	Irx1 (ENSPEMG00000016721) #32	Adamts16 (ENSPEMG00000001407) #33	Ice1 (ENSPEMG00000029176) #34	ENSPEMG00000021408 #35	Ube2ql1 (ENSPEMG00000025343) #36	Nsun2 (ENSPEMG00000021790) #37
Murinae	ANCESTRAL SPECIES	39	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Rat	MODERN SPECIES		Rpl26-ps2 (ENSRNOG00000069113)	Lrrc14b (ENSRNOG00000028357) #7	Ccdc127 (ENSRNOG00000066093) #8	Sdha (ENSRNOG00000013331) #9	Pdcd6 (ENSRNOG00000014485) #10	Ahrr (ENSRNOG00000014721) #11	Exoc3 (ENSRNOG00000039776) #12	Slc9a3 (ENSRNOG00000015159) #13	Cep72 (ENSRNOG00000015465) #14	Tppp (ENSRNOG00000028261) #15	Zdhhc11 (ENSRNOG00000039743) #17	Brd9 (ENSRNOG00000015676) #18	Trip13 (ENSRNOG00000015810) #19	Nkd2 (ENSRNOG00000016103) #20	Slc12a7 (ENSRNOG00000016372) #21	Slc6a19 (ENSRNOG00000026501) #22	Slc6a18 (ENSRNOG00000016253) #23	Tert (ENSRNOG00000025327) #24	Clptm1l (ENSRNOG00000016923) #25	Slc6a3 (ENSRNOG00000017302) #26	Lpcat1 (ENSRNOG00000017930) #27	Mrpl36 (ENSRNOG00000023407) #28	Ndufs6l1 (ENSRNOG00000062531) #29	Irx4 (ENSRNOG00000012720) #30	Irx2 (ENSRNOG00000012742) #31	Irx1 (ENSRNOG00000033609) #32	Adamts16 (ENSRNOG00000016812) #33	Ice1 (ENSRNOG00000023053) #34	Dlat-ps1 (ENSRNOG00000017095)	Med10 (ENSRNOG00000017150) #35	Ube2ql1 (ENSRNOG00000034075) #36
Mus	ANCESTRAL SPECIES	22	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.v.a #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00860000135976	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Shrew mouse	MODERN SPECIES	2	Zfp72 (MGP_PahariEiJ_G0015803)	Lrrc14b (MGP_PahariEiJ_G0015802) #7	Ccdc127 (MGP_PahariEiJ_G0015801) #8	Sdha (MGP_PahariEiJ_G0015800) #9	Pdcd6 (MGP_PahariEiJ_G0015799) #10	Ahrr (MGP_PahariEiJ_G0015798) #11	Exoc3 (MGP_PahariEiJ_G0015797) #12	Slc9a3 (MGP_PahariEiJ_G0015796) #13	Cep72 (MGP_PahariEiJ_G0015795) #14	Tppp (MGP_PahariEiJ_G0015794) #15	Zdhhc11 (MGP_PahariEiJ_G0015793) #17	Brd9 (MGP_PahariEiJ_G0015792) #18	Trip13 (MGP_PahariEiJ_G0015791) #19	Nkd2 (MGP_PahariEiJ_G0015790) #20	Slc12a7 (MGP_PahariEiJ_G0015789) #21	Slc6a19 (MGP_PahariEiJ_G0015788) #22	Slc6a18 (MGP_PahariEiJ_G0015787) #23	Tert (MGP_PahariEiJ_G0015786) #24	Clptm1l (MGP_PahariEiJ_G0015785) #25	Slc6a3 (MGP_PahariEiJ_G0015784) #26	Lpcat1 (MGP_PahariEiJ_G0015783) #27	Mrpl36 (MGP_PahariEiJ_G0015782) #28	Ndufs6 (MGP_PahariEiJ_G0015781) #29	Irx4 (MGP_PahariEiJ_G0015780) #30	Irx2 (MGP_PahariEiJ_G0015779) #31	Irx1 (MGP_PahariEiJ_G0015778) #32	MGP_PahariEiJ_G0015777	Adamts16 (MGP_PahariEiJ_G0015776) #33	Ice1 (MGP_PahariEiJ_G0015775) #34	MGP_PahariEiJ_G0015774 #35	Ube2ql1 (MGP_PahariEiJ_G0015773) #36
Mus_A	DUPLICATION
Mus_A	ANCESTRAL SPECIES																	ENSGT00940000154896.a #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000154896.a #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00940000154896.a #22
Steppe mouse	MODERN SPECIES	548																ENSMSIG00000006513 #22
Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.b #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00860000135976	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.w #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.b #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866.m #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00860000135976	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982.v.b #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.b #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866.m #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00860000135976	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
spretus	MODERN SPECIES	4	Lrrc14b (MGP_SPRETEiJ_G0019606) #7	MGP_SPRETEiJ_G0019605	Sdha (MGP_SPRETEiJ_G0019604) #9	Pdcd6 (MGP_SPRETEiJ_G0019603) #10	Ahrr (MGP_SPRETEiJ_G0019602) #11	Exoc3 (MGP_SPRETEiJ_G0019601) #12	Slc9a3 (MGP_SPRETEiJ_G0019600) #13	Cep72 (MGP_SPRETEiJ_G0019599) #14	Tppp (MGP_SPRETEiJ_G0019598) #15	MGP_SPRETEiJ_G0019597	Zdhhc11 (MGP_SPRETEiJ_G0019596) #17	Brd9 (MGP_SPRETEiJ_G0019595) #18	Trip13 (MGP_SPRETEiJ_G0019594) #19	Nkd2 (MGP_SPRETEiJ_G0019593) #20	Slc12a7 (MGP_SPRETEiJ_G0019592) #21	Slc6a19 (MGP_SPRETEiJ_G0019591) #22	Slc6a18 (MGP_SPRETEiJ_G0019590) #23	Tert (MGP_SPRETEiJ_G0019589) #24	Clptm1l (MGP_SPRETEiJ_G0019588) #25	Slc6a3 (MGP_SPRETEiJ_G0019587) #26	Lpcat1 (MGP_SPRETEiJ_G0019586) #27	Mrpl36 (MGP_SPRETEiJ_G0019585) #28	Ndufs6 (MGP_SPRETEiJ_G0019584) #29	Irx4 (MGP_SPRETEiJ_G0019583) #30	Irx2 (MGP_SPRETEiJ_G0019582) #31	Irx1 (MGP_SPRETEiJ_G0019581) #32	MGP_SPRETEiJ_G0019580	Adamts16 (MGP_SPRETEiJ_G0019579) #33	Ice1 (MGP_SPRETEiJ_G0019578) #34	MGP_SPRETEiJ_G0019577 #35	MGP_SPRETEiJ_G0019576 #36
Steppe mouse	MODERN SPECIES	3330	Ccdc127 (ENSMSIG00000015569) #8	Sdha (ENSMSIG00000015586) #9	Pdcd6 (ENSMSIG00000015609) #10	Ahrr (ENSMSIG00000015635) #11	Exoc3 (ENSMSIG00000015690) #12	Slc9a3 (ENSMSIG00000015760) #13	Cep72 (ENSMSIG00000015901) #14	Tppp (ENSMSIG00000015921) #15	Zdhhc11 (ENSMSIG00000015943) #17	ENSMSIG00000015988	ENSMSIG00000016004 #18	Trip13 (ENSMSIG00000016051) #19	Nkd2 (ENSMSIG00000016110) #20	Slc12a7 (ENSMSIG00000016137) #21	ENSMSIG00000016283	Slc6a19 (ENSMSIG00000016300) #22	Slc6a18 (ENSMSIG00000016330) #23	Tert (ENSMSIG00000016999) #24	Clptm1l (ENSMSIG00000017023) #25	Slc6a3 (ENSMSIG00000017069) #26	Lpcat1 (ENSMSIG00000017129) #27	Mrpl36 (ENSMSIG00000017166) #28	Ndufs6 (ENSMSIG00000017174) #29	Irx4 (ENSMSIG00000017201) #30	Irx2 (ENSMSIG00000017231) #31	Irx1 (ENSMSIG00000017250) #32	ENSMSIG00000017283	Adamts16 (ENSMSIG00000017303) #33	Ice1 (ENSMSIG00000017478) #34	ENSMSIG00000017532	ENSMSIG00000017563 #35
Mouse	MODERN SPECIES	4	Zfp72 (ENSMUSG00000069184)	Lrrc14b (ENSMUSG00000021579) #7	Ccdc127 (ENSMUSG00000021578) #8	Sdha (ENSMUSG00000021577) #9	Pdcd6 (ENSMUSG00000021576) #10	Ahrr (ENSMUSG00000021575) #11	Exoc3 (ENSMUSG00000034152) #12	Slc9a3 (ENSMUSG00000036123) #13	Cep72 (ENSMUSG00000021572) #14	Tppp (ENSMUSG00000021573) #15	Zdhhc11 (ENSMUSG00000069189) #17	Brd9 (ENSMUSG00000057649) #18	Trip13 (ENSMUSG00000021569) #19	Nkd2 (ENSMUSG00000021567) #20	Slc12a7 (ENSMUSG00000017756) #21	Slc6a19 (ENSMUSG00000021565) #22	Slc6a18 (ENSMUSG00000021612) #23	Tert (ENSMUSG00000021611) #24	Clptm1l (ENSMUSG00000021610) #25	Slc6a3 (ENSMUSG00000021609) #26	Lpcat1 (ENSMUSG00000021608) #27	Mrpl36 (ENSMUSG00000021607) #28	Ndufs6 (ENSMUSG00000021606) #29	Irx4 (ENSMUSG00000021604) #30	Irx2 (ENSMUSG00000001504) #31	Irx1 (ENSMUSG00000060969) #32	Adamts16 (ENSMUSG00000049538) #33	Ice1 (ENSMUSG00000034525) #34	Med10 (ENSMUSG00000021598)	Ube2ql1 (ENSMUSG00000052981) #36	Srd5a1 (ENSMUSG00000021594)
Ryukyu mouse	MODERN SPECIES	4	Lrrc14b (MGP_CAROLIEiJ_G0018722) #7	Ccdc127 (MGP_CAROLIEiJ_G0018721) #8	Sdha (MGP_CAROLIEiJ_G0018720) #9	Pdcd6 (MGP_CAROLIEiJ_G0018719) #10	Ahrr (MGP_CAROLIEiJ_G0018718) #11	Exoc3 (MGP_CAROLIEiJ_G0018717) #12	Slc9a3 (MGP_CAROLIEiJ_G0018716) #13	Cep72 (MGP_CAROLIEiJ_G0018715) #14	Tppp (MGP_CAROLIEiJ_G0018714) #15	MGP_CAROLIEiJ_G0018713	Zdhhc11 (MGP_CAROLIEiJ_G0018712) #17	Brd9 (MGP_CAROLIEiJ_G0018711) #18	Trip13 (MGP_CAROLIEiJ_G0018710) #19	Nkd2 (MGP_CAROLIEiJ_G0018709) #20	Slc12a7 (MGP_CAROLIEiJ_G0018708) #21	Slc6a19 (MGP_CAROLIEiJ_G0018707) #22	Slc6a18 (MGP_CAROLIEiJ_G0018706) #23	Tert (MGP_CAROLIEiJ_G0018705) #24	Clptm1l (MGP_CAROLIEiJ_G0018704) #25	Slc6a3 (MGP_CAROLIEiJ_G0018703) #26	Lpcat1 (MGP_CAROLIEiJ_G0018702) #27	Mrpl36 (MGP_CAROLIEiJ_G0018701) #28	Ndufs6 (MGP_CAROLIEiJ_G0018700) #29	Irx4 (MGP_CAROLIEiJ_G0018699) #30	Irx2 (MGP_CAROLIEiJ_G0018698) #31	Irx1 (MGP_CAROLIEiJ_G0018697) #32	MGP_CAROLIEiJ_G0018696	Adamts16 (MGP_CAROLIEiJ_G0018695) #33	Ice1 (MGP_CAROLIEiJ_G0018694) #34	MGP_CAROLIEiJ_G0018693 #35	Ube2ql1 (MGP_CAROLIEiJ_G0018692) #36
Lagomorpha	ANCESTRAL SPECIES	504																ENSGT00940000154896 #22	ENSGT00940000158906 #23
Pika	MODERN SPECIES	3545																SLC6A19 (ENSOPRG00000008011) #22	SLC6A18 (ENSOPRG00000008030) #23
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	1313																SLC6A19 (ENSOCUG00000007875) #22	ENSOCUG00000022924 #23
Rabbit	MODERN SPECIES	706															ENSOCUG00000037476	ENSOCUG00000017357 #22	ENSOCUG00000035601
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Eulipotyphla	ANCESTRAL SPECIES	1608																ENSGT00940000154896 #22	ENSGT00940000158906 #23
Common shrew	MODERN SPECIES	5418																ENSSARG00000009368 #22	ENSSARG00000009378 #23
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000153665.a #37	ENSGT00950000182886.b.b
Ursidae	ANCESTRAL SPECIES	24	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00940000166335	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Ursus	ANCESTRAL SPECIES	114	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00940000166335	ENSGT00940000161612 #36	ENSGT00940000153665.a #37	ENSGT00950000182886.b.b	ENSGT00940000157811	ENSGT00940000156424
American black bear	MODERN SPECIES	634																SLC6A19 (ENSUAMG00000013992) #22	SLC6A18 (ENSUAMG00000013979) #23	TERT (ENSUAMG00000013975) #24	CLPTM1L (ENSUAMG00000013974) #25	SLC6A3 (ENSUAMG00000013965) #26	LPCAT1 (ENSUAMG00000013960) #27	ENSUAMG00000013957 #28	ENSUAMG00000013955
Polar bear	MODERN SPECIES	324	CCDC127 (ENSUMAG00000022596) #8	ENSUMAG00000022591	SDHA (ENSUMAG00000022271) #9	PDCD6 (ENSUMAG00000022171) #10	ENSUMAG00000022162 #11	ENSUMAG00000022156 #11	EXOC3 (ENSUMAG00000022153) #12	SLC9A3 (ENSUMAG00000022137) #13	CEP72 (ENSUMAG00000022135) #14	TPPP (ENSUMAG00000022129) #15	ENSUMAG00000022124 #17	BRD9 (ENSUMAG00000022112) #18	TRIP13 (ENSUMAG00000022041) #19	ENSUMAG00000022013 #20	SLC12A7 (ENSUMAG00000021868) #21	SLC6A19 (ENSUMAG00000021799) #22	SLC6A18 (ENSUMAG00000021793) #23	CLPTM1L (ENSUMAG00000021602) #25	SLC6A3 (ENSUMAG00000021572) #26	LPCAT1 (ENSUMAG00000021535) #27	ENSUMAG00000021510 #28	ENSUMAG00000021508 #29	ADAMTS16 (ENSUMAG00000021427) #33	ICE1 (ENSUMAG00000021400) #34	ENSUMAG00000021395	NSUN2 (ENSUMAG00000021149) #37	SRD5A1 (ENSUMAG00000021097)	TENT4A (ENSUMAG00000021088)	ADCY2 (ENSUMAG00000020819)
Giant Panda	MODERN SPECIES	13		ENSAMEG00000008542	LRRC14B (ENSAMEG00000008539) #7	CCDC127 (ENSAMEG00000008532) #8	ENSAMEG00000027043	SDHA (ENSAMEG00000008480) #9	PDCD6 (ENSAMEG00000008464) #10	AHRR (ENSAMEG00000008443) #11	EXOC3 (ENSAMEG00000008403) #12	SLC9A3 (ENSAMEG00000008339) #13	CEP72 (ENSAMEG00000008333) #14	ENSAMEG00000008326 #15	ENSAMEG00000029733 #17	BRD9 (ENSAMEG00000008289) #18	ENSAMEG00000008267 #19	ENSAMEG00000010356 #22	SLC6A18 (ENSAMEG00000010403) #23	TERT (ENSAMEG00000010578) #24	CLPTM1L (ENSAMEG00000010640) #25	SLC6A3 (ENSAMEG00000010690) #26	LPCAT1 (ENSAMEG00000010885) #27	NDUFS6 (ENSAMEG00000010930) #29	IRX4 (ENSAMEG00000010933) #30	IRX2 (ENSAMEG00000030165) #31	IRX1 (ENSAMEG00000001629) #32	ENSAMEG00000005402 #33	ICE1 (ENSAMEG00000005383) #34	NSUN2 (ENSAMEG00000002744) #37	SRD5A1 (ENSAMEG00000002796)	TENT4A (ENSAMEG00000002806)	ENSAMEG00000013734
Mustelinae	ANCESTRAL SPECIES	127		ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000153665.a #37	ENSGT00950000182886.b.b	ENSGT00940000157811
American mink	MODERN SPECIES	131	LRRC14B (ENSNVIG00000022319) #7	CCDC127 (ENSNVIG00000022321) #8	SDHA (ENSNVIG00000022331) #9	PDCD6 (ENSNVIG00000022350) #10	ENSNVIG00000022374 #11	ENSNVIG00000022379	EXOC3 (ENSNVIG00000022384) #12	SLC9A3 (ENSNVIG00000022416) #13	CEP72 (ENSNVIG00000022425) #14	TPPP (ENSNVIG00000022432) #15	ENSNVIG00000022438 #17	BRD9 (ENSNVIG00000022450) #18	TRIP13 (ENSNVIG00000022459) #19	ENSNVIG00000022473	SLC12A7 (ENSNVIG00000022621) #21	SLC6A19 (ENSNVIG00000024286) #22	SLC6A18 (ENSNVIG00000024290) #23	TERT (ENSNVIG00000024328) #24	CLPTM1L (ENSNVIG00000024366) #25	SLC6A3 (ENSNVIG00000024373) #26	LPCAT1 (ENSNVIG00000024375) #27	NDUFS6 (ENSNVIG00000024379) #29	IRX4 (ENSNVIG00000024384) #30	IRX2 (ENSNVIG00000000014) #31	ENSNVIG00000000020	IRX1 (ENSNVIG00000000063) #32	ADAMTS16 (ENSNVIG00000000104) #33	ICE1 (ENSNVIG00000000134) #34	MED10 (ENSNVIG00000000179) #35
Ferret	MODERN SPECIES	296	ENSMPUG00000010331	SDHA (ENSMPUG00000010324) #9	PDCD6 (ENSMPUG00000010275) #10	AHRR (ENSMPUG00000010246) #11	EXOC3 (ENSMPUG00000010237) #12	SLC9A3 (ENSMPUG00000010219) #13	ENSMPUG00000010213	CEP72 (ENSMPUG00000010195) #14	TPPP (ENSMPUG00000010167) #15	ENSMPUG00000010149 #17	BRD9 (ENSMPUG00000010082) #18	TRIP13 (ENSMPUG00000010073) #19	ENSMPUG00000019812	SLC12A7 (ENSMPUG00000009280) #21	ENSMPUG00000009276	SLC6A19 (ENSMPUG00000008940) #22	SLC6A18 (ENSMPUG00000008930) #23	TERT (ENSMPUG00000008917) #24	CLPTM1L (ENSMPUG00000008908) #25	ENSMPUG00000008903	SLC6A3 (ENSMPUG00000007672) #26	LPCAT1 (ENSMPUG00000007662) #27	ENSMPUG00000019810	IRX4 (ENSMPUG00000007656) #30	IRX2 (ENSMPUG00000007647) #31	ENSMPUG00000007644	IRX1 (ENSMPUG00000007638) #32	ENSMPUG00000007631	ENSMPUG00000007624	ENSMPUG00000007621	ENSMPUG00000007616
Canidae	ANCESTRAL SPECIES	62	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00390000013811.b.d	ENSGT00950000183199.b #34	ENSGT00950000186221	ENSGT00390000014501 #35
Canis_lupus	ANCESTRAL SPECIES	49	ENSGT01030000234531.C #7	ENSGT00390000010779.a.b.b.e.b.a	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00390000013811.b.d	ENSGT00950000183199.b #34	ENSGT00950000186221	ENSGT00390000014501 #35
Dingo	MODERN SPECIES	159	CCDC127 (ENSCAFG00020023080) #8	SDHA (ENSCAFG00020023074) #9	ENSCAFG00020023071 #10	ENSCAFG00020023068 #11	AHRR (ENSCAFG00020023063) #11	EXOC3 (ENSCAFG00020023060) #12	SLC9A3 (ENSCAFG00020023055) #13	CEP72 (ENSCAFG00020023049) #14	TPPP (ENSCAFG00020023047) #15	ENSCAFG00020023043 #17	ENSCAFG00020023045 #17	BRD9 (ENSCAFG00020023040) #18	TRIP13 (ENSCAFG00020023035) #19	NKD2 (ENSCAFG00020023031) #20	SLC12A7 (ENSCAFG00020023026) #21	SLC6A19 (ENSCAFG00020023014) #22	SLC6A18 (ENSCAFG00020022926) #23	TERT (ENSCAFG00020022919) #24	CLPTM1L (ENSCAFG00020022917) #25	SLC6A3 (ENSCAFG00020022906) #26	LPCAT1 (ENSCAFG00020022903) #27	MRPL36 (ENSCAFG00020022901) #28	NDUFS6 (ENSCAFG00020022900) #29	IRX4 (ENSCAFG00020022896) #30	IRX2 (ENSCAFG00020022893) #31	IRX1 (ENSCAFG00020022891) #32	ADAMTS16 (ENSCAFG00020022881) #33	ENSCAFG00020022878	ENSCAFG00020022877 #34	ENSCAFG00020022874	MED10 (ENSCAFG00020022869) #35
Dog	MODERN SPECIES	27	ENSCAFG00845015302	LRRC14B (ENSCAFG00845015253) #7	ENSCAFG00845015223	CCDC127 (ENSCAFG00845015192) #8	SDHA (ENSCAFG00845015100) #9	PDCD6 (ENSCAFG00845014967) #10	AHRR (ENSCAFG00845014897) #11	EXOC3 (ENSCAFG00845027965) #12	SLC9A3 (ENSCAFG00845027782) #13	CEP72 (ENSCAFG00845027639) #14	ENSCAFG00845027566 #17	BRD9 (ENSCAFG00845027387) #18	TRIP13 (ENSCAFG00845027144) #19	NKD2 (ENSCAFG00845027016) #20	SLC12A7 (ENSCAFG00845026600) #21	SLC6A19 (ENSCAFG00845026397) #22	SLC6A18 (ENSCAFG00845026287) #23	TERT (ENSCAFG00845025817) #24	CLPTM1L (ENSCAFG00845025532) #25	SLC6A3 (ENSCAFG00845025384) #26	LPCAT1 (ENSCAFG00845025093) #27	MRPL36 (ENSCAFG00845025034) #28	ENSCAFG00845024996 #29	IRX4 (ENSCAFG00845024941) #30	IRX2 (ENSCAFG00845024864) #31	IRX1 (ENSCAFG00845024655) #32	ADAMTS16 (ENSCAFG00845024365) #33	ENSCAFG00845024318	ICE1 (ENSCAFG00845024182) #34	ENSCAFG00845024145	MED10 (ENSCAFG00845024101) #35
Red fox	MODERN SPECIES	162	CCDC127 (ENSVVUG00000021997) #8	SDHA (ENSVVUG00000021998) #9	ENSVVUG00000022001 #10	ENSVVUG00000022002 #10	ENSVVUG00000022006 #11	AHRR (ENSVVUG00000022010) #11	EXOC3 (ENSVVUG00000022015) #12	SLC9A3 (ENSVVUG00000022048) #13	CEP72 (ENSVVUG00000022173) #14	TPPP (ENSVVUG00000022176) #15	ENSVVUG00000022177 #17	BRD9 (ENSVVUG00000022181) #18	TRIP13 (ENSVVUG00000022187) #19	NKD2 (ENSVVUG00000022191) #20	SLC12A7 (ENSVVUG00000022193) #21	SLC6A19 (ENSVVUG00000022214) #22	SLC6A18 (ENSVVUG00000022215) #23	TERT (ENSVVUG00000022219) #24	ENSVVUG00000022302 #25	SLC6A3 (ENSVVUG00000022318) #26	LPCAT1 (ENSVVUG00000022326) #27	ENSVVUG00000022337 #29	ENSVVUG00000022342 #28	IRX4 (ENSVVUG00000022348) #30	IRX2 (ENSVVUG00000022361) #31	ADAMTS16 (ENSVVUG00000022388) #33	ENSVVUG00000022447
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES	6	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Panthera	ANCESTRAL SPECIES	6	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00390000002752.w.a.a	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.n #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00390000002752.w.a.a	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.n #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
lion	MODERN SPECIES		CCDC127 (ENSPLOG00000002900) #8	SDHA (ENSPLOG00000002936) #9	ENSPLOG00000002995	PDCD6 (ENSPLOG00000003034) #10	ENSPLOG00000003112 #11	ENSPLOG00000003084 #11	EXOC3 (ENSPLOG00000003127) #12	SLC9A3 (ENSPLOG00000003168) #13	CEP72 (ENSPLOG00000003205) #14	TPPP (ENSPLOG00000003226) #15	ENSPLOG00000003257 #17	BRD9 (ENSPLOG00000003277) #18	TRIP13 (ENSPLOG00000003312) #19	NKD2 (ENSPLOG00000003335) #20	SLC12A7 (ENSPLOG00000003362) #21	SLC6A19 (ENSPLOG00000003408) #22	SLC6A18 (ENSPLOG00000003576) #23	TERT (ENSPLOG00000003847) #24	CLPTM1L (ENSPLOG00000003877) #25	SLC6A3 (ENSPLOG00000003913) #26	LPCAT1 (ENSPLOG00000003938) #27	ENSPLOG00000003949 #28	NDUFS6 (ENSPLOG00000003955) #29	IRX4 (ENSPLOG00000003963) #30	IRX2 (ENSPLOG00000003976) #31	ENSPLOG00000003986	IRX1 (ENSPLOG00000003994) #32	ADAMTS16 (ENSPLOG00000004010) #33	ICE1 (ENSPLOG00000004038) #34	MED10 (ENSPLOG00000004055) #35	UBE2QL1 (ENSPLOG00000004071) #36
leopard	MODERN SPECIES	19																ENSPPRG00000011435 #22	SLC6A18 (ENSPPRG00000011628) #23	TERT (ENSPPRG00000006427) #24	CLPTM1L (ENSPPRG00000016169) #25	SLC6A3 (ENSPPRG00000018924) #26	LPCAT1 (ENSPPRG00000021187) #27	NDUFS6 (ENSPPRG00000022405) #29	IRX4 (ENSPPRG00000024448) #30	IRX2 (ENSPPRG00000024401) #31	ENSPPRG00000024272	IRX1 (ENSPPRG00000024209) #32	ADAMTS16 (ENSPPRG00000023920) #33	ENSPPRG00000022666 #34	MED10 (ENSPPRG00000000589) #35	UBE2QL1 (ENSPPRG00000000629) #36	NSUN2 (ENSPPRG00000001946) #37
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Panthera	ANCESTRAL SPECIES	6	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00390000002752.w.a.a	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.n #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Tiger	MODERN SPECIES	509												BRD9 (ENSPTIG00000020502) #18	TRIP13 (ENSPTIG00000002005) #19	ENSPTIG00000004749 #20	SLC12A7 (ENSPTIG00000005358) #21	ENSPTIG00000006453 #22
Panthera_a	ANCESTRAL SPECIES	3	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00390000002752.w.a.a	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.n #15	ENSGT00940000161608.g.a #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896.f #22	ENSGT00940000154896.e #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
leopard	MODERN SPECIES	228	LRRC14B (ENSPPRG00000003472) #7	CCDC127 (ENSPPRG00000003413) #8	SDHA (ENSPPRG00000003291) #9	ENSPPRG00000002949	ENSPPRG00000002870 #10	AHRR (ENSPPRG00000002696) #11	EXOC3 (ENSPPRG00000002370) #12	SLC9A3 (ENSPPRG00000002356) #13	CEP72 (ENSPPRG00000002120) #14	TPPP (ENSPPRG00000002056) #15	ENSPPRG00000002044 #17	BRD9 (ENSPPRG00000002004) #18	TRIP13 (ENSPPRG00000001817) #19	NKD2 (ENSPPRG00000001801) #20	SLC12A7 (ENSPPRG00000001609) #21	ENSPPRG00000001565 #22
Cat	MODERN SPECIES		CCDC127 (ENSFCAG00000027428) #8	ENSFCAG00000034012	SDHA (ENSFCAG00000030558) #9	PDCD6 (ENSFCAG00000041352) #10	ENSFCAG00000047255 #11	AHRR (ENSFCAG00000015430) #11	EXOC3 (ENSFCAG00000015431) #12	SLC9A3 (ENSFCAG00000015433) #13	CEP72 (ENSFCAG00000002925) #14	TPPP (ENSFCAG00000041042) #15	ENSFCAG00000009537 #17	BRD9 (ENSFCAG00000009535) #18	TRIP13 (ENSFCAG00000009538) #19	NKD2 (ENSFCAG00000029202) #20	SLC12A7 (ENSFCAG00000009540) #21	SLC6A19 (ENSFCAG00000009541) #22	SLC6A18 (ENSFCAG00000009542) #23	TERT (ENSFCAG00000009543) #24	CLPTM1L (ENSFCAG00000009544) #25	SLC6A3 (ENSFCAG00000002581) #26	LPCAT1 (ENSFCAG00000000783) #27	ENSFCAG00000026326 #28	NDUFS6 (ENSFCAG00000033856) #29	IRX4 (ENSFCAG00000022359) #30	IRX2 (ENSFCAG00000040664) #31	ENSFCAG00000044678	IRX1 (ENSFCAG00000036923) #32	ENSFCAG00000025379	ADAMTS16 (ENSFCAG00000003777) #33	ICE1 (ENSFCAG00000027435) #34	ENSFCAG00000037684
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Equus	ANCESTRAL SPECIES	23	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Horse	MODERN SPECIES	13	LRRC14B (ENSECAG00000001935) #7	CCDC127 (ENSECAG00000001898) #8	SDHA (ENSECAG00000000397) #9	PDCD6 (ENSECAG00000021111) #10	AHRR (ENSECAG00000017812) #11	EXOC3 (ENSECAG00000010149) #12	SLC9A3 (ENSECAG00000023335) #13	CEP72 (ENSECAG00000021103) #14	TPPP (ENSECAG00000019638) #15	ENSECAG00000019107 #17	ENSECAG00000055422	BRD9 (ENSECAG00000013115) #18	TRIP13 (ENSECAG00000018918) #19	NKD2 (ENSECAG00000016907) #20	SLC12A7 (ENSECAG00000009911) #21	SLC6A19 (ENSECAG00000015357) #22	SLC6A18 (ENSECAG00000014930) #23	TERT (ENSECAG00000001347) #24	CLPTM1L (ENSECAG00000013231) #25	ENSECAG00000058649	SLC6A3 (ENSECAG00000024615) #26	LPCAT1 (ENSECAG00000021716) #27	MRPL36 (ENSECAG00000001222) #28	NDUFS6 (ENSECAG00000021690) #29	IRX4 (ENSECAG00000017403) #30	IRX2 (ENSECAG00000015758) #31	IRX1 (ENSECAG00000015273) #32	ENSECAG00000001110	ADAMTS16 (ENSECAG00000000787) #33	ICE1 (ENSECAG00000023968) #34	MED10 (ENSECAG00000023738)
Donkey	MODERN SPECIES	1	ENSEASG00005018040	LRRC14B (ENSEASG00005018059) #7	CCDC127 (ENSEASG00005028230) #8	SDHA (ENSEASG00005018069) #9	PDCD6 (ENSEASG00005034813) #10	AHRR (ENSEASG00005018098) #11	EXOC3 (ENSEASG00005018109) #12	SLC9A3 (ENSEASG00005018117) #13	CEP72 (ENSEASG00005018122) #14	TPPP (ENSEASG00005029304) #15	ENSEASG00005018131 #17	BRD9 (ENSEASG00005018145) #18	TRIP13 (ENSEASG00005018251) #19	NKD2 (ENSEASG00005018295) #20	SLC12A7 (ENSEASG00005018301) #21	SLC6A19 (ENSEASG00005018308) #22	SLC6A18 (ENSEASG00005018374) #23	TERT (ENSEASG00005018543) #24	CLPTM1L (ENSEASG00005018545) #25	SLC6A3 (ENSEASG00005018547) #26	LPCAT1 (ENSEASG00005032107) #27	ENSEASG00005036706 #28	NDUFS6 (ENSEASG00005023604) #29	IRX4 (ENSEASG00005018554) #30	IRX2 (ENSEASG00005018557) #31	IRX1 (ENSEASG00005018560) #32	ADAMTS16 (ENSEASG00005018564) #33	ICE1 (ENSEASG00005018571) #34	ENSEASG00005018574	MED10 (ENSEASG00005018576) #35	UBE2QL1 (ENSEASG00005032765) #36
Chiroptera	ANCESTRAL SPECIES	1		ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00390000002325	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Microchiroptera	ANCESTRAL SPECIES	3		ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Greater horseshoe bat	MODERN SPECIES	25		PLEKHG4B (ENSRFEG00010000694)	LRRC14B (ENSRFEG00010000773) #7	CCDC127 (ENSRFEG00010000786) #8	SDHA (ENSRFEG00010000818) #9	ENSRFEG00010000946 #10	AHRR (ENSRFEG00010001066) #11	EXOC3 (ENSRFEG00010001107) #12	SLC9A3 (ENSRFEG00010001146) #13	CEP72 (ENSRFEG00010001216) #14	TPPP (ENSRFEG00010001251) #15	BRD9 (ENSRFEG00010001284) #18	TRIP13 (ENSRFEG00010001385) #19	NKD2 (ENSRFEG00010001407) #20	SLC12A7 (ENSRFEG00010001460) #21	SLC6A19 (ENSRFEG00010001577) #22	SLC6A18 (ENSRFEG00010001792) #23	TERT (ENSRFEG00010002119) #24	CLPTM1L (ENSRFEG00010002171) #25	SLC6A3 (ENSRFEG00010002207) #26	LPCAT1 (ENSRFEG00010002236) #27	MRPL36 (ENSRFEG00010002262) #28	NDUFS6 (ENSRFEG00010002276) #29	IRX4 (ENSRFEG00010002288) #30	IRX2 (ENSRFEG00010002308) #31	ENSRFEG00010002333	ENSRFEG00010002345	ENSRFEG00010002361	IRX1 (ENSRFEG00010002369) #32	ADAMTS16 (ENSRFEG00010002424) #33	ICE1 (ENSRFEG00010002508) #34
Microbat	MODERN SPECIES	937	ENSMLUG00000016936	PDE4D (ENSMLUG00000016574)	PLEKHG4B (ENSMLUG00000016985)	LRRC14B (ENSMLUG00000016995) #7	CCDC127 (ENSMLUG00000027087) #8	SDHA (ENSMLUG00000017004) #9	AHRR (ENSMLUG00000012589) #11	ENSMLUG00000012599 #12	SLC9A3 (ENSMLUG00000007140) #13	CEP72 (ENSMLUG00000015222) #14	TPPP (ENSMLUG00000015232) #15	ENSMLUG00000004227 #18	TRIP13 (ENSMLUG00000004237) #19	NKD2 (ENSMLUG00000004247) #20	SLC12A7 (ENSMLUG00000004253) #21	SLC6A19 (ENSMLUG00000012517) #22	SLC6A18 (ENSMLUG00000012527) #23	TERT (ENSMLUG00000012533) #24	CLPTM1L (ENSMLUG00000012546) #25	SLC6A3 (ENSMLUG00000015691) #26	LPCAT1 (ENSMLUG00000015702) #27	NDUFS6 (ENSMLUG00000016888) #29	ENSMLUG00000007563 #30	IRX2 (ENSMLUG00000002364) #31	ENSMLUG00000030572	ENSMLUG00000028897	ADAMTS16 (ENSMLUG00000016787) #33	ICE1 (ENSMLUG00000016799) #34	ENSMLUG00000007960 #35	UBE2QL1 (ENSMLUG00000029107) #36	NSUN2 (ENSMLUG00000009609) #37
Megabat	MODERN SPECIES	1904																SLC6A19 (ENSPVAG00000006269) #22	ENSPVAG00000006271 #23
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.i #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c.i #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501.f #35	ENSGT00940000161612 #36
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT01010000226625	ENSGT00940000153875.c.i #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501.f #35	ENSGT00940000161612 #36
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT01010000226625	ENSGT00940000153875.c.i #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501.f #35	ENSGT00940000161612 #36
Beluga whale	MODERN SPECIES	16	LRRC14B (ENSDLEG00000002966) #7	CCDC127 (ENSDLEG00000002972) #8	SDHA (ENSDLEG00000002984) #9	PDCD6 (ENSDLEG00000003011) #10	ENSDLEG00000003116 #11	ENSDLEG00000003124 #11	EXOC3 (ENSDLEG00000003162) #12	SLC9A3 (ENSDLEG00000003234) #13	ENSDLEG00000003360	TPPP (ENSDLEG00000003365) #15	ENSDLEG00000003387 #17	BRD9 (ENSDLEG00000003425) #18	TRIP13 (ENSDLEG00000003445) #19	NKD2 (ENSDLEG00000003494) #20	SLC12A7 (ENSDLEG00000003522) #21	SLC6A19 (ENSDLEG00000003586) #22	SLC6A18 (ENSDLEG00000003661) #23	TERT (ENSDLEG00000003731) #24	CLPTM1L (ENSDLEG00000003766) #25	SLC6A3 (ENSDLEG00000003787) #26	LPCAT1 (ENSDLEG00000003802) #27	ENSDLEG00000003825 #28	NDUFS6 (ENSDLEG00000003836) #29	IRX4 (ENSDLEG00000003849) #30	IRX2 (ENSDLEG00000003871) #31	IRX1 (ENSDLEG00000003895) #32	ADAMTS16 (ENSDLEG00000000178) #33	ICE1 (ENSDLEG00000000235) #34	MED10 (ENSDLEG00000000283) #35	UBE2QL1 (ENSDLEG00000000392) #36	NSUN2 (ENSDLEG00000000437) #37
Narwhal	MODERN SPECIES	298	LRRC14B (ENSMMNG00015004895) #7	CCDC127 (ENSMMNG00015004898) #8	SDHA (ENSMMNG00015004909) #9	PDCD6 (ENSMMNG00015004944) #10	ENSMMNG00015004957 #11	ENSMMNG00015004962 #11	EXOC3 (ENSMMNG00015004969) #12	SLC9A3 (ENSMMNG00015004984) #13	ENSMMNG00015004998	ENSMMNG00015005002 #15	ENSMMNG00015005004 #17	BRD9 (ENSMMNG00015005011) #18	TRIP13 (ENSMMNG00015005029) #19	NKD2 (ENSMMNG00015005039) #20	SLC12A7 (ENSMMNG00015005066) #21	SLC6A19 (ENSMMNG00015005102) #22	SLC6A18 (ENSMMNG00015005126) #23	TERT (ENSMMNG00015005153) #24	CLPTM1L (ENSMMNG00015005167) #25	SLC6A3 (ENSMMNG00015005189) #26	LPCAT1 (ENSMMNG00015005202) #27	MRPL36 (ENSMMNG00015005219) #28	NDUFS6 (ENSMMNG00015005230) #29	IRX4 (ENSMMNG00015005245) #30	IRX2 (ENSMMNG00015005260) #31	ENSMMNG00015005274	IRX1 (ENSMMNG00015005292) #32	ADAMTS16 (ENSMMNG00015005325) #33	ICE1 (ENSMMNG00015005372) #34	ENSMMNG00015005394 #35	UBE2QL1 (ENSMMNG00015005409) #36
Vaquita	MODERN SPECIES	14		LRRC14B (ENSPSNG00000003799) #7	CCDC127 (ENSPSNG00000003775) #8	SDHA (ENSPSNG00000003340) #9	PDCD6 (ENSPSNG00000002976) #10	AHRR (ENSPSNG00000002943) #11	EXOC3 (ENSPSNG00000002905) #12	SLC9A3 (ENSPSNG00000002835) #13	ENSPSNG00000002800	ENSPSNG00000002786 #15	ENSPSNG00000002768 #17	BRD9 (ENSPSNG00000002727) #18	TRIP13 (ENSPSNG00000002688) #19	NKD2 (ENSPSNG00000002651) #20	SLC12A7 (ENSPSNG00000002551) #21	SLC6A19 (ENSPSNG00000002478) #22	SLC6A18 (ENSPSNG00000002444) #23	TERT (ENSPSNG00000002372) #24	CLPTM1L (ENSPSNG00000002275) #25	SLC6A3 (ENSPSNG00000002215) #26	LPCAT1 (ENSPSNG00000002146) #27	ENSPSNG00000002113 #28	NDUFS6 (ENSPSNG00000002096) #29	IRX4 (ENSPSNG00000002071) #30	IRX2 (ENSPSNG00000002053) #31	ENSPSNG00000002036	IRX1 (ENSPSNG00000002005) #32	ENSPSNG00000001985	ADAMTS16 (ENSPSNG00000001929) #33	ICE1 (ENSPSNG00000001876) #34	ENSPSNG00000001827 #35
Dolphin	MODERN SPECIES	2014																SLC6A19 (ENSTTRG00000003793) #22	ENSTTRG00000003824 #23	TERT (ENSTTRG00000003863) #24	CLPTM1L (ENSTTRG00000003881) #25
Sperm whale	MODERN SPECIES	19	PRMT2 (ENSPCTG00005000392)	ENSPCTG00005000466	LRRC14B (ENSPCTG00005000554) #7	CCDC127 (ENSPCTG00005000571) #8	SDHA (ENSPCTG00005000654) #9	PDCD6 (ENSPCTG00005000919) #10	AHRR (ENSPCTG00005000954) #11	EXOC3 (ENSPCTG00005000986) #12	SLC9A3 (ENSPCTG00005001031) #13	TPPP (ENSPCTG00005001138) #15	ENSPCTG00005001162 #17	BRD9 (ENSPCTG00005001199) #18	TRIP13 (ENSPCTG00005001243) #19	NKD2 (ENSPCTG00005001284) #20	SLC12A7 (ENSPCTG00005001313) #21	SLC6A19 (ENSPCTG00005001357) #22	TERT (ENSPCTG00005001408) #24	CLPTM1L (ENSPCTG00005001495) #25	SLC6A3 (ENSPCTG00005001531) #26	LPCAT1 (ENSPCTG00005001554) #27	MRPL36 (ENSPCTG00005001573) #28	NDUFS6 (ENSPCTG00005001580) #29	IRX4 (ENSPCTG00005001592) #30	IRX2 (ENSPCTG00005001610) #31	ENSPCTG00005001625	ENSPCTG00005001636 #31	IRX1 (ENSPCTG00005001645) #32	ADAMTS16 (ENSPCTG00005001733) #33	ICE1 (ENSPCTG00005002002) #34	ENSPCTG00005002020	MED10 (ENSPCTG00005002031) #35
Blue whale	MODERN SPECIES	14	LRRC14B (ENSBMSG00010012302) #7	ENSBMSG00010012313 #8	SDHA (ENSBMSG00010012365) #9	PDCD6 (ENSBMSG00010012547) #10	ENSBMSG00010012570 #11	ENSBMSG00010012584 #11	EXOC3 (ENSBMSG00010012608) #12	SLC9A3 (ENSBMSG00010012631) #13	CEP72 (ENSBMSG00010012670) #14	TPPP (ENSBMSG00010012688) #15	ENSBMSG00010012701 #17	BRD9 (ENSBMSG00010012713) #18	TRIP13 (ENSBMSG00010012739) #19	NKD2 (ENSBMSG00010012760) #20	SLC12A7 (ENSBMSG00010012799) #21	SLC6A19 (ENSBMSG00010013817) #22	ENSBMSG00010013849 #23	TERT (ENSBMSG00010013889) #24	CLPTM1L (ENSBMSG00010014019) #25	SLC6A3 (ENSBMSG00010014310) #26	LPCAT1 (ENSBMSG00010014400) #27	MRPL36 (ENSBMSG00010014493) #28	NDUFS6 (ENSBMSG00010014513) #29	ENSBMSG00010014531 #30	ENSBMSG00010014549 #30	IRX2 (ENSBMSG00010014578) #31	ENSBMSG00010014609	IRX1 (ENSBMSG00010014662) #32	ADAMTS16 (ENSBMSG00010014738) #33	ICE1 (ENSBMSG00010014997) #34	MED10 (ENSBMSG00010015064) #35
Pecora	ANCESTRAL SPECIES	25		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Yarkand deer	MODERN SPECIES	17				LRRC14B (ENSCHYG00000022957) #7	CCDC127 (ENSCHYG00000022920) #8	SDHA (ENSCHYG00000022688) #9	PDCD6 (ENSCHYG00000022425) #10	AHRR (ENSCHYG00000022329) #11	EXOC3 (ENSCHYG00000022221) #12	SLC9A3 (ENSCHYG00000021986) #13	CEP72 (ENSCHYG00000021847) #14	ENSCHYG00000021797 #15	TRIP13 (ENSCHYG00000021703) #19	NKD2 (ENSCHYG00000021646) #20	SLC12A7 (ENSCHYG00000021056) #21	SLC6A19 (ENSCHYG00000020930) #22	SLC6A18 (ENSCHYG00000020702) #23	TERT (ENSCHYG00000020414) #24	ENSCHYG00000020359	CLPTM1L (ENSCHYG00000020066) #25	ENSCHYG00000019585 #26	LPCAT1 (ENSCHYG00000019379) #27	ENSCHYG00000019353 #28	ENSCHYG00000019290 #29	IRX4 (ENSCHYG00000019198) #30	IRX1 (ENSCHYG00000019067) #32	ADAMTS16 (ENSCHYG00000018678) #33	ICE1 (ENSCHYG00000018552) #34	ENSCHYG00000018521	ENSCHYG00000018501	MED10 (ENSCHYG00000018459) #35
Percora_a	ANCESTRAL SPECIES	26		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Siberian musk deer	MODERN SPECIES	1232																SLC6A19 (ENSMMSG00000018180) #22	ENSMMSG00000018241 #23	ENSMMSG00000018279 #23	TERT (ENSMMSG00000018344) #24	CLPTM1L (ENSMMSG00000018773) #25	SLC6A3 (ENSMMSG00000018870) #26	LPCAT1 (ENSMMSG00000018965) #27	ENSMMSG00000019066 #28	NDUFS6 (ENSMMSG00000019077) #29	IRX4 (ENSMMSG00000019111) #30	IRX2 (ENSMMSG00000019141) #31	IRX1 (ENSMMSG00000019201) #32
Bovidae	ANCESTRAL SPECIES	26		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Bovinae	ANCESTRAL SPECIES	25		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00950000186039	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Bos	ANCESTRAL SPECIES	26		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00950000186039	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Bos_b	ANCESTRAL SPECIES	29		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657.e #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00950000186039	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Cow	MODERN SPECIES	12	LRRC14B (ENSBTAG00000045954) #7	SDHA (ENSBTAG00000046019) #9	PDCD6 (ENSBTAG00000046493) #10	AHRR (ENSBTAG00000052375) #11	ENSBTAG00000026527 #11	EXOC3 (ENSBTAG00000008606) #12	SLC9A3 (ENSBTAG00000004629) #13	CEP72 (ENSBTAG00000011405) #14	TPPP (ENSBTAG00000052247) #15	ENSBTAG00000054687 #17	BRD9 (ENSBTAG00000006971) #18	TRIP13 (ENSBTAG00000006972) #19	NKD2 (ENSBTAG00000034435) #20	SLC12A7 (ENSBTAG00000006775) #21	ENSBTAG00000049547 #21	SLC6A19 (ENSBTAG00000045695) #22	SLC6A18 (ENSBTAG00000012559) #23	TERT (ENSBTAG00000012567) #24	CLPTM1L (ENSBTAG00000001329) #25	SLC6A3 (ENSBTAG00000015843) #26	LPCAT1 (ENSBTAG00000000944) #27	ENSBTAG00000050317 #28	NDUFS6 (ENSBTAG00000009914) #29	IRX4 (ENSBTAG00000015907) #30	ENSBTAG00000054006	IRX2 (ENSBTAG00000047499) #31	IRX1 (ENSBTAG00000000809) #32	ADAMTS16 (ENSBTAG00000018460) #33	ICE1 (ENSBTAG00000018501) #34	ENSBTAG00000049304	MED10 (ENSBTAG00000008130) #35
Hybrid Bos Indicus	MODERN SPECIES	12	LRRC14B (ENSBIXG00005026009) #7	CCDC127 (ENSBIXG00005026035) #8	SDHA (ENSBIXG00005026296) #9	ENSBIXG00005007641 #10	ENSBIXG00005007248 #11	ENSBIXG00005005569 #11	EXOC3 (ENSBIXG00005026512) #12	SLC9A3 (ENSBIXG00005004537) #13	CEP72 (ENSBIXG00005004540) #14	ENSBIXG00005004543 #17	BRD9 (ENSBIXG00005026623) #18	TRIP13 (ENSBIXG00005026642) #19	NKD2 (ENSBIXG00005026692) #20	ENSBIXG00005026742 #15	SLC12A7 (ENSBIXG00005026843) #21	SLC6A19 (ENSBIXG00005026916) #22	SLC6A18 (ENSBIXG00005026953) #23	TERT (ENSBIXG00005004650) #24	CLPTM1L (ENSBIXG00005006940) #25	SLC6A3 (ENSBIXG00005004683) #26	LPCAT1 (ENSBIXG00005027232) #27	ENSBIXG00005027272 #28	NDUFS6 (ENSBIXG00005004700) #29	IRX4 (ENSBIXG00005027355) #30	ENSBIXG00005027401	IRX2 (ENSBIXG00005027442) #31	IRX1 (ENSBIXG00005027510) #32	ENSBIXG00005027561	ADAMTS16 (ENSBIXG00005027878) #33	ICE1 (ENSBIXG00005006625) #34	MED10 (ENSBIXG00005006964) #35
Bos_a	ANCESTRAL SPECIES	38		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Domestic yak	MODERN SPECIES	15	SPZ1 (ENSBGRG00000020037)	LRRC14B (ENSBGRG00000020055) #7	ENSBGRG00000020088 #8	ENSBGRG00000020133 #8	SDHA (ENSBGRG00000020296) #9	PDCD6 (ENSBGRG00000021460) #10	AHRR (ENSBGRG00000021601) #11	EXOC3 (ENSBGRG00000021686) #12	SLC9A3 (ENSBGRG00000021848) #13	CEP72 (ENSBGRG00000022184) #14	ENSBGRG00000022305 #15	TRIP13 (ENSBGRG00000006896) #19	NKD2 (ENSBGRG00000007004) #20	SLC12A7 (ENSBGRG00000007178) #21	ENSBGRG00000007512	SLC6A19 (ENSBGRG00000007536) #22	SLC6A18 (ENSBGRG00000007711) #23	TERT (ENSBGRG00000007850) #24	CLPTM1L (ENSBGRG00000008008) #25	SLC6A3 (ENSBGRG00000008417) #26	LPCAT1 (ENSBGRG00000008483) #27	ENSBGRG00000008559 #28	ENSBGRG00000008576 #29	IRX4 (ENSBGRG00000008624) #30	IRX2 (ENSBGRG00000008666) #31	IRX1 (ENSBGRG00000008805) #32	ADAMTS16 (ENSBGRG00000008878) #33	ENSBGRG00000009083	ENSBGRG00000009109 #34	ENSBGRG00000009147 #35	ENSBGRG00000009193 #36
Wild yak	MODERN SPECIES	632																SLC6A19 (ENSBMUG00000020039) #22	SLC6A18 (ENSBMUG00000019941) #23	ENSBMUG00000019931 #24	CLPTM1L (ENSBMUG00000019897) #25	SLC6A3 (ENSBMUG00000019851) #26	LPCAT1 (ENSBMUG00000019764) #27	ENSBMUG00000019669 #29	ENSBMUG00000019655 #30	ENSBMUG00000019617 #32	ADAMTS16 (ENSBMUG00000019575) #33
American bison	MODERN SPECIES	3291							ENSBBBG00000004236 #11	EXOC3 (ENSBBBG00000017105) #12	SLC9A3 (ENSBBBG00000017032) #13	CEP72 (ENSBBBG00000004199) #14	TPPP (ENSBBBG00000016941) #15	ENSBBBG00000004187 #17	BRD9 (ENSBBBG00000016929) #18	TRIP13 (ENSBBBG00000016892) #19	SLC12A7 (ENSBBBG00000008296) #21	SLC6A19 (ENSBBBG00000016767) #22	SLC6A18 (ENSBBBG00000000711) #23	CLPTM1L (ENSBBBG00000016737) #25	SLC6A3 (ENSBBBG00000016720) #26	LPCAT1 (ENSBBBG00000016651) #27	ENSBBBG00000004122 #28	NDUFS6 (ENSBBBG00000016621) #29	ADAMTS16 (ENSBBBG00000004110) #33	ENSBBBG00000000735 #34	ENSBBBG00000000745	MED10 (ENSBBBG00000000761) #35	NSUN2 (ENSBBBG00000016571) #37	TENT4A (ENSBBBG00000016484)	ADCY2 (ENSBBBG00000016455)	ENSBBBG00000016418	CFAP90 (ENSBBBG00000016415)
Caprinae	ANCESTRAL SPECIES	24		ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36	ENSGT00940000153665.a #37
Rambouillet Sheep	MODERN SPECIES	7						LRRC14B (ENSOARG00020014808) #7	CCDC127 (ENSOARG00020014783) #8	ENSOARG00020014523 #10	EXOC3 (ENSOARG00020014305) #12	SLC9A3 (ENSOARG00020014019) #13	TPPP (ENSOARG00020013938) #15	ENSOARG00020013861 #17	BRD9 (ENSOARG00020013591) #18	TRIP13 (ENSOARG00020013528) #19	SLC12A7 (ENSOARG00020012793) #21	SLC6A19 (ENSOARG00020012724) #22	SLC6A18 (ENSOARG00020011151) #23	TERT (ENSOARG00020010728) #24	CLPTM1L (ENSOARG00020010550) #25	SLC6A3 (ENSOARG00020010397) #26	LPCAT1 (ENSOARG00020010211) #27	ENSOARG00020010180 #28	NDUFS6 (ENSOARG00020010127) #29	IRX4 (ENSOARG00020010022) #30	IRX2 (ENSOARG00020023975) #31	IRX1 (ENSOARG00020023933) #32	ADAMTS16 (ENSOARG00020023792) #33	ICE1 (ENSOARG00020023470) #34	MED10 (ENSOARG00020023421) #35	UBE2QL1 (ENSOARG00020023404) #36	NSUN2 (ENSOARG00020023145) #37
Goat	MODERN SPECIES	12							LRRC14B (ENSCHIG00000006964) #7	CCDC127 (ENSCHIG00000024092) #8	SDHA (ENSCHIG00000017916) #9	ENSCHIG00000008009 #10	AHRR (ENSCHIG00000008715) #11	EXOC3 (ENSCHIG00000013133) #12	SLC9A3 (ENSCHIG00000021090) #13	CEP72 (ENSCHIG00000015774) #14	TPPP (ENSCHIG00000012981) #15	SLC6A19 (ENSCHIG00000009247) #22	SLC6A18 (ENSCHIG00000017593) #23	TERT (ENSCHIG00000008229) #24	BRD9 (ENSCHIG00000015801) #18	TRIP13 (ENSCHIG00000022332) #19	NKD2 (ENSCHIG00000022698) #20	SLC12A7 (ENSCHIG00000018789) #21	SLC6A3 (ENSCHIG00000021410) #26	LPCAT1 (ENSCHIG00000008758) #27	NDUFS6 (ENSCHIG00000020281) #29	IRX4 (ENSCHIG00000023690) #30	IRX2 (ENSCHIG00000011251) #31	IRX1 (ENSCHIG00000017851) #32	ADAMTS16 (ENSCHIG00000010517) #33	ICE1 (ENSCHIG00000024007) #34	MED10 (ENSCHIG00000020899) #35
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00990000208225	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000153665.a #37	ENSGT00950000182886.b.b
Arabian camel	MODERN SPECIES	22	LRRC14B (ENSCDRG00005015203) #7	CCDC127 (ENSCDRG00005015184) #8	SDHA (ENSCDRG00005014763) #9	PDCD6 (ENSCDRG00005014172) #10	ENSCDRG00005014135 #11	ENSCDRG00005014008 #11	EXOC3 (ENSCDRG00005013917) #12	SLC9A3 (ENSCDRG00005013790) #13	CEP72 (ENSCDRG00005013654) #14	TPPP (ENSCDRG00005013597) #15	ENSCDRG00005013501 #17	BRD9 (ENSCDRG00005013313) #18	TRIP13 (ENSCDRG00005013214) #19	NKD2 (ENSCDRG00005013068) #20	SLC12A7 (ENSCDRG00005007851) #21	SLC6A19 (ENSCDRG00005007586) #22	SLC6A18 (ENSCDRG00005007426) #23	TERT (ENSCDRG00005007091) #24	CLPTM1L (ENSCDRG00005006937) #25	SLC6A3 (ENSCDRG00005006584) #26	LPCAT1 (ENSCDRG00005006427) #27	MRPL36 (ENSCDRG00005006409) #28	NDUFS6 (ENSCDRG00005006367) #29	IRX4 (ENSCDRG00005005132) #30	IRX2 (ENSCDRG00005005106) #31	ENSCDRG00005005061	ENSCDRG00005004962 #33	ICE1 (ENSCDRG00005004943) #34	MED10 (ENSCDRG00005004916) #35	NSUN2 (ENSCDRG00005004622) #37	SRD5A1 (ENSCDRG00005004588)
Suina	ANCESTRAL SPECIES	25	ENSGT00940000162507.A	ENSGT01030000234531.C #7	ENSGT00390000008818 #8	ENSGT00910000144277 #9	ENSGT00940000160982 #10	ENSGT00940000154486.a.b #11	ENSGT01030000234613.a.a #12	ENSGT00940000158616 #13	ENSGT00530000063884.a #14	ENSGT00940000153875.c #15	ENSGT00940000161608 #17	ENSGT00950000183170.b.a #18	ENSGT00390000017432 #19	ENSGT00440000033589.d #20	ENSGT00940000157657 #21	ENSGT00940000154896 #22	ENSGT00940000158906 #23	ENSGT00390000018531 #24	ENSGT00960000191710	ENSGT00530000063461.A #25	ENSGT00940000161224 #26	ENSGT01030000234574.A.a #27	ENSGT00390000010866 #28	ENSGT00390000015775 #29	ENSGT00940000158596 #30	ENSGT00940000161198 #31	ENSGT00940000160429 #32	ENSGT00940000159433 #33	ENSGT00950000183199.b #34	ENSGT00390000014501 #35	ENSGT00940000161612 #36
Chacoan peccary	MODERN SPECIES	768								NDUFS6 (ENSCWAG00000011315) #29	MRPL36 (ENSCWAG00000000042) #28	LPCAT1 (ENSCWAG00000000112) #27	SLC6A3 (ENSCWAG00000000147) #26	CLPTM1L (ENSCWAG00000000195) #25	ENSCWAG00000000249	ENSCWAG00000000267 #24	SLC6A18 (ENSCWAG00000000332) #23	ENSCWAG00000000425 #22
Pig	MODERN SPECIES	7	ENSSSCG00000039089	LRRC14B (ENSSSCG00000033375) #7	CCDC127 (ENSSSCG00000036783) #8	SDHA (ENSSSCG00000020686) #9	PDCD6 (ENSSSCG00000032090) #10	AHRR (ENSSSCG00000032843) #11	EXOC3 (ENSSSCG00000039607) #12	SLC9A3 (ENSSSCG00000039413) #13	ENSSSCG00000031800 #14	TPPP (ENSSSCG00000032698) #15	ENSSSCG00000040193 #17	BRD9 (ENSSSCG00000035118) #18	TRIP13 (ENSSSCG00000034522) #19	NKD2 (ENSSSCG00000055161) #20	SLC12A7 (ENSSSCG00000034302) #21	SLC6A19 (ENSSSCG00000017120) #22	SLC6A18 (ENSSSCG00000017117) #23	TERT (ENSSSCG00000017118) #24	CLPTM1L (ENSSSCG00000017119) #25	SLC6A3 (ENSSSCG00000017121) #26	LPCAT1 (ENSSSCG00000017116) #27	MRPL36 (ENSSSCG00000040154) #28	NDUFS6 (ENSSSCG00000017114) #29	IRX4 (ENSSSCG00000017112) #30	IRX2 (ENSSSCG00000032074) #31	IRX1 (ENSSSCG00000034884) #32	ADAMTS16 (ENSSSCG00000017109) #33	ICE1 (ENSSSCG00000031547) #34	MED10 (ENSSSCG00000017106) #35	UBE2QL1 (ENSSSCG00000035825) #36	NSUN2 (ENSSSCG00000017104) #37