Glires ANCESTRAL SPECIES 13 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Myomorpha ANCESTRAL SPECIES 24 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Muroidea ANCESTRAL SPECIES 21 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Murinae ANCESTRAL SPECIES 12 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00950000183152.A #8 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052.s #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Mus ANCESTRAL SPECIES 14 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00950000183152.A #8 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052.s #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00950000183152.A #8 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052.s #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00950000183152.A #8 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052.s #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00950000183152.A #8 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052.s #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 spretus MODERN SPECIES 2 Cct4 (MGP_SPRETEiJ_G0016977) #7 MGP_SPRETEiJ_G0016976 #8 Commd1 (MGP_SPRETEiJ_G0016975) #9 MGP_SPRETEiJ_G0016974 #10 B3gnt2 (MGP_SPRETEiJ_G0016973) #11 MGP_SPRETEiJ_G0016972 #12 Tmem17 (MGP_SPRETEiJ_G0016971) #13 Ehbp1 (MGP_SPRETEiJ_G0016970) #14 Otx1 (MGP_SPRETEiJ_G0016969) #15 Wdpcp (MGP_SPRETEiJ_G0016968) #16 Mdh1 (MGP_SPRETEiJ_G0016967) #17 Ugp2 (MGP_SPRETEiJ_G0016966) #18 Vps54 (MGP_SPRETEiJ_G0016965) #19 Peli1 (MGP_SPRETEiJ_G0016964) #20 Lgalsl (MGP_SPRETEiJ_G0016963) #21 Aftph (MGP_SPRETEiJ_G0016962) #22 Sertad2 (MGP_SPRETEiJ_G0016961) #23 Slc1a4 (MGP_SPRETEiJ_G0016960) #24 Cep68 (MGP_SPRETEiJ_G0016959) #25 Rab1a (MGP_SPRETEiJ_G0016958) #26 Actr2 (MGP_SPRETEiJ_G0016957) #27 Spred2 (MGP_SPRETEiJ_G0016956) #28 Asb12 (MGP_SPRETEiJ_G0016955) #29 Meis1 (MGP_SPRETEiJ_G0016954) #30 Etaa1 (MGP_SPRETEiJ_G0016953) #31 C1d (MGP_SPRETEiJ_G0016952) #32 Pno1 (MGP_SPRETEiJ_G0016951) #33 Dnaaf10 (MGP_SPRETEiJ_G0016950) #34 Ppp3r1 (MGP_SPRETEiJ_G0016949) #35 MGP_SPRETEiJ_G0016948 #36 Plek (MGP_SPRETEiJ_G0016947) #37 Steppe mouse MODERN SPECIES 3178 ENSMSIG00000013501 Aftph (ENSMSIG00000013440) #22 Sertad2 (ENSMSIG00000013434) #23 ENSMSIG00000013417 Slc1a4 (ENSMSIG00000013384) #24 Cep68 (ENSMSIG00000013342) #25 Rab1a (ENSMSIG00000013288) #26 Actr2 (ENSMSIG00000013218) #27 Spred2 (ENSMSIG00000013142) #28 ENSMSIG00000013132 ENSMSIG00000013123 Meis1 (ENSMSIG00000012755) #30 Mouse MODERN SPECIES 2 Xpo1 (ENSMUSG00000020290) Fam161a (ENSMUSG00000049811) Cct4 (ENSMUSG00000007739) #7 Commd1 (ENSMUSG00000051355) #9 Commd1b (ENSMUSG00000098650) B3gnt2 (ENSMUSG00000051650) #11 Tmem17 (ENSMUSG00000049904) #13 Ehbp1 (ENSMUSG00000042302) #14 Otx1 (ENSMUSG00000005917) #15 Wdpcp (ENSMUSG00000020319) #16 Mdh1 (ENSMUSG00000020321) #17 Ugp2 (ENSMUSG00000001891) #18 Vps54 (ENSMUSG00000020128) #19 Peli1 (ENSMUSG00000020134) #20 Lgalsl (ENSMUSG00000042363) #21 Aftph (ENSMUSG00000049659) #22 Sertad2 (ENSMUSG00000049800) #23 Slc1a4 (ENSMUSG00000020142) #24 Cep68 (ENSMUSG00000044066) #25 Rab1a (ENSMUSG00000020149) #26 Actr2 (ENSMUSG00000020152) #27 Spred2 (ENSMUSG00000045671) #28 Meis1 (ENSMUSG00000020160) #30 Etaa1 (ENSMUSG00000016984) #31 C1d (ENSMUSG00000000581) #32 Pno1 (ENSMUSG00000020116) #33 Dnaaf10 (ENSMUSG00000078970) #34 Ppp3r1 (ENSMUSG00000033953) #35 Cnrip1 (ENSMUSG00000044629) #36 Plek (ENSMUSG00000020120) #37 Fbxo48 (ENSMUSG00000044966) Ryukyu mouse MODERN SPECIES 2 Cct4 (MGP_CAROLIEiJ_G0016134) #7 MGP_CAROLIEiJ_G0016133 #8 MGP_CAROLIEiJ_G0016132 #9 B3gnt2 (MGP_CAROLIEiJ_G0016131) #11 MGP_CAROLIEiJ_G0016130 #9 MGP_CAROLIEiJ_G0016129 #12 Tmem17 (MGP_CAROLIEiJ_G0016128) #13 Ehbp1 (MGP_CAROLIEiJ_G0016127) #14 Otx1 (MGP_CAROLIEiJ_G0016126) #15 Wdpcp (MGP_CAROLIEiJ_G0016125) #16 Mdh1 (MGP_CAROLIEiJ_G0016124) #17 Ugp2 (MGP_CAROLIEiJ_G0016123) #18 Vps54 (MGP_CAROLIEiJ_G0016122) #19 Peli1 (MGP_CAROLIEiJ_G0016121) #20 Gm5065 (MGP_CAROLIEiJ_G0016120) #21 Aftph (MGP_CAROLIEiJ_G0016119) #22 Sertad2 (MGP_CAROLIEiJ_G0016118) #23 Slc1a4 (MGP_CAROLIEiJ_G0016117) #24 Cep68 (MGP_CAROLIEiJ_G0016116) #25 Rab1a (MGP_CAROLIEiJ_G0016115) #26 Actr2 (MGP_CAROLIEiJ_G0016114) #27 Spred2 (MGP_CAROLIEiJ_G0016113) #28 Meis1 (MGP_CAROLIEiJ_G0016112) #30 Etaa1 (MGP_CAROLIEiJ_G0016111) #31 C1d (MGP_CAROLIEiJ_G0016110) #32 Pno1 (MGP_CAROLIEiJ_G0016109) #33 Dnaaf10 (MGP_CAROLIEiJ_G0016108) #34 Ppp3r1 (MGP_CAROLIEiJ_G0016107) #35 Cnrip1 (MGP_CAROLIEiJ_G0016106) #36 Plek (MGP_CAROLIEiJ_G0016105) #37 Fbxo48 (MGP_CAROLIEiJ_G0016104) Shrew mouse MODERN SPECIES 4 Commd1 (MGP_PahariEiJ_G0016757) #9 MGP_PahariEiJ_G0016758 #9 MGP_PahariEiJ_G0016759 #8 B3gnt2 (MGP_PahariEiJ_G0016760) #11 MGP_PahariEiJ_G0016761 #12 Tmem17 (MGP_PahariEiJ_G0016762) #13 Ehbp1 (MGP_PahariEiJ_G0016763) #14 Otx1 (MGP_PahariEiJ_G0016764) #15 MGP_PahariEiJ_G0016765 #16 Mdh1 (MGP_PahariEiJ_G0016766) #17 Ugp2 (MGP_PahariEiJ_G0016767) #18 Vps54 (MGP_PahariEiJ_G0016768) #19 Peli1 (MGP_PahariEiJ_G0016769) #20 MGP_PahariEiJ_G0016770 #21 Lgalsl (MGP_PahariEiJ_G0016771) #21 Aftph (MGP_PahariEiJ_G0016772) #22 Sertad2 (MGP_PahariEiJ_G0016773) #23 Slc1a4 (MGP_PahariEiJ_G0016774) #24 Cep68 (MGP_PahariEiJ_G0016775) #25 Rab1a (MGP_PahariEiJ_G0016776) #26 Actr2 (MGP_PahariEiJ_G0016777) #27 Spred2 (MGP_PahariEiJ_G0016778) #28 Meis1 (MGP_PahariEiJ_G0016779) #30 Etaa1 (MGP_PahariEiJ_G0016780) #31 C1d (MGP_PahariEiJ_G0016781) #32 Dnaaf10 (MGP_PahariEiJ_G0016782) #34 Pno1 (MGP_PahariEiJ_G0016783) #33 Ppp3r1 (MGP_PahariEiJ_G0016784) #35 MGP_PahariEiJ_G0016785 #36 Plek (MGP_PahariEiJ_G0016786) #37 Fbxo48 (MGP_PahariEiJ_G0016787) Rat MODERN SPECIES 5 B3gnt2 (ENSRNOG00000009267) #11 LOC100361636 (ENSRNOG00000033346) AABR07016623.1 (ENSRNOG00000009240) Tmem17 (ENSRNOG00000009220) #13 Ehbp1 (ENSRNOG00000008917) #14 Otx1 (ENSRNOG00000065081) #15 ENSRNOG00000065408 Wdpcp (ENSRNOG00000054331) #16 Mdh1 (ENSRNOG00000008103) #17 Ugp2 (ENSRNOG00000008079) #18 Vps54 (ENSRNOG00000007125) #19 Peli1 (ENSRNOG00000006329) #20 LOC108352809 (ENSRNOG00000042277) Lgalsl (ENSRNOG00000005464) #21 LOC108352861 (ENSRNOG00000029052) Aftph (ENSRNOG00000005411) #22 Sertad2 (ENSRNOG00000005393) #23 Slc1a4 (ENSRNOG00000005248) #24 Cep68 (ENSRNOG00000027282) #25 Rab1a (ENSRNOG00000004992) #26 Rpl38 (ENSRNOG00000033686) ENSRNOG00000070133 AABR07016566.1 (ENSRNOG00000051648) Actr2 (ENSRNOG00000004959) #27 Spred2 (ENSRNOG00000004888) #28 Meis1 (ENSRNOG00000004606) #30 Etaa1l1 (ENSRNOG00000006185) #31 Hnrnpk-ps1 (ENSRNOG00000063529) C1d (ENSRNOG00000005982) #32 Pno1 (ENSRNOG00000005524) #33 Cnrip1 (ENSRNOG00000005326) #36 Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Northern American deer mouse MODERN SPECIES 1 ENSPEMG00000011408 Cct4 (ENSPEMG00000014381) #7 Commd1 (ENSPEMG00000008857) #9 ENSPEMG00000013373 #8 B3gnt2 (ENSPEMG00000030694) #11 ENSPEMG00000029232 Tmem17 (ENSPEMG00000012666) #13 Ehbp1 (ENSPEMG00000014061) #14 Otx1 (ENSPEMG00000027636) #15 Wdpcp (ENSPEMG00000016341) #16 Mdh1 (ENSPEMG00000007456) #17 Ugp2 (ENSPEMG00000010268) #18 Vps54 (ENSPEMG00000012405) #19 Peli1 (ENSPEMG00000030617) #20 ENSPEMG00000015267 #21 Aftph (ENSPEMG00000010156) #22 Sertad2 (ENSPEMG00000027852) #23 ENSPEMG00000016241 Slc1a4 (ENSPEMG00000018063) #24 Cep68 (ENSPEMG00000002161) #25 Rab1a (ENSPEMG00000009340) #26 ENSPEMG00000025517 Actr2 (ENSPEMG00000015727) #27 Spred2 (ENSPEMG00000029042) #28 ENSPEMG00000028236 ENSPEMG00000012914 Meis1 (ENSPEMG00000008113) #30 Etaa1 (ENSPEMG00000011918) #31 ENSPEMG00000026465 #32 Dnaaf10 (ENSPEMG00000022118) #34 Pno1 (ENSPEMG00000022989) #33 Prairie vole MODERN SPECIES 92 ENSMOCG00000018790 ENSMOCG00000016877 Cct4 (ENSMOCG00000011789) #7 Commd1 (ENSMOCG00000006391) #9 B3gnt2 (ENSMOCG00000000086) #11 Tmem17 (ENSMOCG00000015494) #13 Ehbp1 (ENSMOCG00000007287) #14 Otx1 (ENSMOCG00000014191) #15 Wdpcp (ENSMOCG00000003579) #16 Mdh1 (ENSMOCG00000015448) #17 Ugp2 (ENSMOCG00000009715) #18 Vps54 (ENSMOCG00000009563) #19 Peli1 (ENSMOCG00000016437) #20 Gm5065 (ENSMOCG00000014300) #21 ENSMOCG00000003932 Aftph (ENSMOCG00000015081) #22 Sertad2 (ENSMOCG00000002173) #23 Slc1a4 (ENSMOCG00000001173) #24 Cep68 (ENSMOCG00000003444) #25 Rab1a (ENSMOCG00000017022) #26 Actr2 (ENSMOCG00000008248) #27 Spred2 (ENSMOCG00000014005) #28 Meis1 (ENSMOCG00000016359) #30 Etaa1 (ENSMOCG00000018537) #31 C1d (ENSMOCG00000010860) #32 Dnaaf10 (ENSMOCG00000000313) #34 Pno1 (ENSMOCG00000017268) #33 Ppp3r1 (ENSMOCG00000012867) #35 Cnrip1 (ENSMOCG00000004432) #36 Plek (ENSMOCG00000018168) #37 Fbxo48 (ENSMOCG00000015915) Cricetinae ANCESTRAL SPECIES 37 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Chinese hamster chok1gshd MODERN SPECIES 121 ENSCGRG00001007132 #8 Commd1 (ENSCGRG00001007842) #9 B3gnt2 (ENSCGRG00001005196) #11 ENSCGRG00001025059 Tmem17 (ENSCGRG00001024384) #13 Ehbp1 (ENSCGRG00001022633) #14 Otx1 (ENSCGRG00001017328) #15 Wdpcp (ENSCGRG00001012886) #16 ENSCGRG00001023990 Mdh1 (ENSCGRG00001021102) #17 UGP2 (ENSCGRG00001012845) #18 Vps54 (ENSCGRG00001009286) #19 Peli1 (ENSCGRG00001021958) #20 Gm5065 (ENSCGRG00001013868) #21 ENSCGRG00001009126 Aftph (ENSCGRG00001016162) #22 Sertad2 (ENSCGRG00001009657) #23 ENSCGRG00001005474 Slc1a4 (ENSCGRG00001017715) #24 Cep68 (ENSCGRG00001014327) #25 ENSCGRG00001012691 #26 ENSCGRG00001017243 #27 Spred2 (ENSCGRG00001015924) #28 Meis1 (ENSCGRG00001009447) #30 Etaa1 (ENSCGRG00001020354) #31 C1d (ENSCGRG00001023376) #32 ENSCGRG00001017610 #34 ENSCGRG00001007472 #33 Ppp3r1 (ENSCGRG00001020769) #35 Cnrip1 (ENSCGRG00001014944) #36 Plek (ENSCGRG00001023663) #37 Golden Hamster MODERN SPECIES 639 Xpo1 (ENSMAUG00000006769) ENSMAUG00000012775 Cct4 (ENSMAUG00000000518) #7 Commd1 (ENSMAUG00000010569) #9 B3gnt2 (ENSMAUG00000002963) #11 Tmem17 (ENSMAUG00000003448) #13 Ehbp1 (ENSMAUG00000000935) #14 Otx1 (ENSMAUG00000019114) #15 Wdpcp (ENSMAUG00000011349) #16 ENSMAUG00000012018 Mdh1 (ENSMAUG00000018086) #17 ENSMAUG00000012689 #18 Vps54 (ENSMAUG00000010788) #19 Peli1 (ENSMAUG00000012937) #20 ENSMAUG00000015033 #21 Aftph (ENSMAUG00000016557) #22 Sertad2 (ENSMAUG00000004242) #23 Slc1a4 (ENSMAUG00000019775) #24 Cep68 (ENSMAUG00000014820) #25 Rab1a (ENSMAUG00000012156) #26 Actr2 (ENSMAUG00000008458) #27 Spred2 (ENSMAUG00000013657) #28 Meis1 (ENSMAUG00000001130) #30 Etaa1 (ENSMAUG00000010594) #31 C1d (ENSMAUG00000008974) #32 Dnaaf10 (ENSMAUG00000011603) #34 Pno1 (ENSMAUG00000014995) #33 Ppp3r1 (ENSMAUG00000014614) #35 Cnrip1 (ENSMAUG00000019592) #36 Plek (ENSMAUG00000011299) #37 Fbxo48 (ENSMAUG00000020533) Upper Galilee mountains blind mole rat MODERN SPECIES 1542 Ehbp1 (ENSNGAG00000022543) #14 Otx1 (ENSNGAG00000023167) #15 Wdpcp (ENSNGAG00000022039) #16 ENSNGAG00000016412 Mdh1 (ENSNGAG00000022959) #17 Ugp2 (ENSNGAG00000014716) #18 Vps54 (ENSNGAG00000019724) #19 Peli1 (ENSNGAG00000014256) #20 ENSNGAG00000017298 #21 Aftph (ENSNGAG00000022259) #22 ENSNGAG00000010686 Sertad2 (ENSNGAG00000019290) #23 Slc1a4 (ENSNGAG00000022015) #24 Cep68 (ENSNGAG00000024137) #25 Rab1a (ENSNGAG00000005838) #26 Lesser Egyptian jerboa MODERN SPECIES 74 Fam98a (ENSJJAG00000012732) Rasgrp3 (ENSJJAG00000021552) ENSJJAG00000003107 #7 Commd1 (ENSJJAG00000006007) #9 B3gnt2 (ENSJJAG00000007561) #11 Tmem17 (ENSJJAG00000007029) #13 Ehbp1 (ENSJJAG00000023917) #14 Otx1 (ENSJJAG00000011287) #15 ENSJJAG00000015148 #16 ENSJJAG00000014833 #16 Mdh1 (ENSJJAG00000024369) #17 Ugp2 (ENSJJAG00000014432) #18 Vps54 (ENSJJAG00000012401) #19 Peli1 (ENSJJAG00000000296) #20 Gm5065 (ENSJJAG00000016772) #21 ENSJJAG00000020384 #22 Sertad2 (ENSJJAG00000015989) #23 Slc1a4 (ENSJJAG00000002418) #24 Cep68 (ENSJJAG00000016421) #25 Rab1a (ENSJJAG00000014396) #26 Actr2 (ENSJJAG00000008642) #27 Spred2 (ENSJJAG00000020977) #28 Meis1 (ENSJJAG00000015459) #30 ENSJJAG00000011226 #31 ENSJJAG00000021064 ENSJJAG00000023186 #32 Dnaaf10 (ENSJJAG00000019935) #34 Pno1 (ENSJJAG00000022862) #33 Ppp3r1 (ENSJJAG00000016869) #35 Cnrip1 (ENSJJAG00000016204) #36 Plek (ENSJJAG00000005757) #37 Kangaroo rat MODERN SPECIES 382 Commd1 (ENSDORG00000001166) #9 ENSDORG00000027292 B3gnt2 (ENSDORG00000024683) #11 Tmem17 (ENSDORG00000024954) #13 Ehbp1 (ENSDORG00000002628) #14 ENSDORG00000023858 Otx1 (ENSDORG00000024553) #15 Wdpcp (ENSDORG00000003329) #16 ENSDORG00000009021 Mdh1 (ENSDORG00000000099) #17 Rasl2-9 (ENSDORG00000027038) Ugp2 (ENSDORG00000013164) #18 Vps54 (ENSDORG00000009782) #19 Peli1 (ENSDORG00000025404) #20 ENSDORG00000027919 #21 ENSDORG00000004159 #22 ENSDORG00000027058 Sertad2 (ENSDORG00000025954) #23 Slc1a4 (ENSDORG00000002394) #24 Cep68 (ENSDORG00000002111) #25 ENSDORG00000028628 #26 Actr2 (ENSDORG00000001487) #27 Spred2 (ENSDORG00000012174) #28 Meis1 (ENSDORG00000008334) #30 C1d (ENSDORG00000003300) #32 Dnaaf10 (ENSDORG00000006862) #34 ENSDORG00000006867 #33 Ppp3r1 (ENSDORG00000024931) #35 Cnrip1 (ENSDORG00000025749) #36 Plek (ENSDORG00000029923) #37 Fbxo48 (ENSDORG00000011239) Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00390000001858 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 Sciuridae ANCESTRAL SPECIES 16 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00390000001858 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 Marmotini ANCESTRAL SPECIES 14 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00390000001858 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000154431.e.a.f ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 Alpin marmot MODERN SPECIES 6 ENSMMMG00000006598 ENSMMMG00000006583 CCT4 (ENSMMMG00000006543) #7 ENSMMMG00000006529 #9 B3GNT2 (ENSMMMG00000006495) #11 TMEM17 (ENSMMMG00000006473) #13 EHBP1 (ENSMMMG00000006363) #14 OTX1 (ENSMMMG00000006353) #15 WDPCP (ENSMMMG00000006330) #16 MDH1 (ENSMMMG00000006303) #17 ENSMMMG00000006286 UGP2 (ENSMMMG00000006263) #18 VPS54 (ENSMMMG00000006188) #19 PELI1 (ENSMMMG00000006175) #20 LGALSL (ENSMMMG00000006152) #21 AFTPH (ENSMMMG00000006097) #22 ENSMMMG00000006048 ENSMMMG00000006042 SLC1A4 (ENSMMMG00000006026) #24 CEP68 (ENSMMMG00000005980) #25 RAB1A (ENSMMMG00000005929) #26 ACTR2 (ENSMMMG00000005910) #27 ENSMMMG00000005906 SPRED2 (ENSMMMG00000005882) #28 ENSMMMG00000005873 ENSMMMG00000005870 MEIS1 (ENSMMMG00000005763) #30 ENSMMMG00000005757 ENSMMMG00000005754 ETAA1 (ENSMMMG00000005704) #31 C1D (ENSMMMG00000005685) #32 Marmotini_b ANCESTRAL SPECIES 44 ENSGT00940000153408.B ENSGT00940000154451.s ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029.m #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00390000001858 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00960000190724 ENSGT00940000156841 #28 ENSGT00940000154431.e.a.f ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 Squirrel MODERN SPECIES 91 ENSSTOG00000028618 FAM161A (ENSSTOG00000026146) CCT4 (ENSSTOG00000014911) #7 COMMD1 (ENSSTOG00000015062) #9 B3GNT2 (ENSSTOG00000015068) #11 TMEM17 (ENSSTOG00000009462) #13 EHBP1 (ENSSTOG00000020225) #14 OTX1 (ENSSTOG00000025219) #15 WDPCP (ENSSTOG00000014213) #16 MDH1 (ENSSTOG00000014227) #17 ENSSTOG00000023912 UGP2 (ENSSTOG00000000789) #18 VPS54 (ENSSTOG00000023517) #19 PELI1 (ENSSTOG00000026315) #20 LGALSL (ENSSTOG00000024204) #21 AFTPH (ENSSTOG00000020828) #22 ENSSTOG00000030042 SERTAD2 (ENSSTOG00000008454) #23 SLC1A4 (ENSSTOG00000025160) #24 CEP68 (ENSSTOG00000011479) #25 ENSSTOG00000020693 #26 ACTR2 (ENSSTOG00000012608) #27 SPRED2 (ENSSTOG00000022318) #28 ENSSTOG00000024155 MEIS1 (ENSSTOG00000009914) #30 ETAA1 (ENSSTOG00000027144) #31 C1D (ENSSTOG00000012346) #32 DNAAF10 (ENSSTOG00000024192) #34 PNO1 (ENSSTOG00000026989) #33 PPP3R1 (ENSSTOG00000025985) #35 CNRIP1 (ENSSTOG00000004875) #36 Arctic ground squirrel MODERN SPECIES 47 XPO1 (ENSUPAG00010011307) ENSUPAG00010011301 FAM161A (ENSUPAG00010011296) CCT4 (ENSUPAG00010011275) #7 ENSUPAG00010011263 #9 B3GNT2 (ENSUPAG00010011255) #11 TMEM17 (ENSUPAG00010011243) #13 EHBP1 (ENSUPAG00010011097) #14 OTX1 (ENSUPAG00010011094) #15 WDPCP (ENSUPAG00010011061) #16 MDH1 (ENSUPAG00010011052) #17 UGP2 (ENSUPAG00010011000) #18 VPS54 (ENSUPAG00010010962) #19 PELI1 (ENSUPAG00010010945) #20 LGALSL (ENSUPAG00010010929) #21 AFTPH (ENSUPAG00010010843) #22 SERTAD2 (ENSUPAG00010010839) #23 ENSUPAG00010010837 SLC1A4 (ENSUPAG00010010829) #24 CEP68 (ENSUPAG00010010822) #25 RAB1A (ENSUPAG00010010773) #26 ACTR2 (ENSUPAG00010010750) #27 ENSUPAG00010010742 SPRED2 (ENSUPAG00010010724) #28 ENSUPAG00010010722 ENSUPAG00010010713 MEIS1 (ENSUPAG00010010695) #30 ENSUPAG00010010694 ETAA1 (ENSUPAG00010010688) #31 ENSUPAG00010010674 #32 DNAAF10 (ENSUPAG00010010668) #34 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 5 FAM161A (ENSSVLG00005023008) CCT4 (ENSSVLG00005022942) #7 CRIPT (ENSSVLG00005022896) ENSSVLG00005022859 #9 ENSSVLG00005022821 B3GNT2 (ENSSVLG00005022804) #11 TMEM17 (ENSSVLG00005022771) #13 EHBP1 (ENSSVLG00005022645) #14 OTX1 (ENSSVLG00005022587) #15 WDPCP (ENSSVLG00005022261) #16 MDH1 (ENSSVLG00005022103) #17 UGP2 (ENSSVLG00005021917) #18 VPS54 (ENSSVLG00005021631) #19 PELI1 (ENSSVLG00005021561) #20 LGALSL (ENSSVLG00005021478) #21 ENSSVLG00005021416 #22 SERTAD2 (ENSSVLG00005021387) #23 SLC1A4 (ENSSVLG00005021330) #24 ENSSVLG00005021277 ENSSVLG00005021243 ENSSVLG00005021194 TMSB10 (ENSSVLG00005021149) ENSSVLG00005021102 DNAH6 (ENSSVLG00005019791) SUCLG1 (ENSSVLG00005019152) ENSSVLG00005019059 ENSSVLG00005019021 ENSSVLG00005018963 LRRTM1 (ENSSVLG00005018942) CTNNA2 (ENSSVLG00005018168) ENSSVLG00005017931 Eurasian red squirrel MODERN SPECIES 3 ODAD2 (ENSSVLG00005016451) ENSSVLG00005016298 WAC (ENSSVLG00005015976) ENSSVLG00005015928 ENSSVLG00005015917 BAMBI (ENSSVLG00005015877) ENSSVLG00005015824 MAP3K8 (ENSSVLG00005015778) MTPAP (ENSSVLG00005015727) JCAD (ENSSVLG00005015699) SVIL (ENSSVLG00005014605) ZNF438 (ENSSVLG00005014347) ZEB1 (ENSSVLG00005014010) ENSSVLG00005013711 ARHGAP12 (ENSSVLG00005024026) ENSSVLG00005023935 #22 ENSSVLG00005023922 ENSSVLG00005023874 KIF5B (ENSSVLG00005023823) EPC1 (ENSSVLG00005023747) ENSSVLG00005023715 ENSSVLG00005023536 ITGB1 (ENSSVLG00005023311) NRP1 (ENSSVLG00005023267) ENSSVLG00005023228 ENSSVLG00005023205 PARD3 (ENSSVLG00005022949) CUL2 (ENSSVLG00005022796) CREM (ENSSVLG00005021874) ENSSVLG00005021688 ENSSVLG00005021670 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00390000001858 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A.f #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A.f #25 ENSGT00940000154958 #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Guinea pig MODERN SPECIES 48 XPO1 (ENSCPOG00000034053) FAM161A (ENSCPOG00000002085) CCT4 (ENSCPOG00000002086) #7 COMMD1 (ENSCPOG00000002088) #9 B3GNT2 (ENSCPOG00000034379) #11 TMEM17 (ENSCPOG00000035038) #13 EHBP1 (ENSCPOG00000002001) #14 OTX1 (ENSCPOG00000004881) #15 ENSCPOG00000030520 #16 ENSCPOG00000036317 #16 MDH1 (ENSCPOG00000010755) #17 UGP2 (ENSCPOG00000008459) #18 VPS54 (ENSCPOG00000037738) #19 PELI1 (ENSCPOG00000037199) #20 LGALSL (ENSCPOG00000039657) #21 ENSCPOG00000033401 #22 SLC1A4 (ENSCPOG00000008754) #24 CEP68 (ENSCPOG00000001592) #25 RAB1A (ENSCPOG00000015437) #26 ACTR2 (ENSCPOG00000025808) #27 SPRED2 (ENSCPOG00000037272) #28 Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00390000001858 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A.f #25 ENSGT00940000154958.y #26 ENSGT00940000154556 #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Long-tailed chinchilla MODERN SPECIES 131 XPO1 (ENSCLAG00000012953) FAM161A (ENSCLAG00000011652) CCT4 (ENSCLAG00000014321) #7 COMMD1 (ENSCLAG00000013262) #9 B3GNT2 (ENSCLAG00000013147) #11 TMEM17 (ENSCLAG00000013487) #13 EHBP1 (ENSCLAG00000007561) #14 OTX1 (ENSCLAG00000010265) #15 ENSCLAG00000008400 #16 MDH1 (ENSCLAG00000007815) #17 UGP2 (ENSCLAG00000010416) #18 VPS54 (ENSCLAG00000007366) #19 PELI1 (ENSCLAG00000006481) #20 LGALSL (ENSCLAG00000015114) #21 ENSCLAG00000012344 AFTPH (ENSCLAG00000012032) #22 SERTAD2 (ENSCLAG00000008318) #23 SLC1A4 (ENSCLAG00000008207) #24 CEP68 (ENSCLAG00000012193) #25 RAB1A (ENSCLAG00000014766) #26 ACTR2 (ENSCLAG00000010920) #27 SPRED2 (ENSCLAG00000011449) #28 MEIS1 (ENSCLAG00000010420) #30 ETAA1 (ENSCLAG00000013575) #31 C1D (ENSCLAG00000011883) #32 DNAAF10 (ENSCLAG00000014702) #34 PNO1 (ENSCLAG00000015058) #33 PPP3R1 (ENSCLAG00000012159) #35 CNRIP1 (ENSCLAG00000012035) #36 PLEK (ENSCLAG00000010835) #37 FBXO48 (ENSCLAG00000010201) Degu MODERN SPECIES 119 B3GNT2 (ENSODEG00000011165) #11 ENSODEG00000011529 #13 EHBP1 (ENSODEG00000012259) #14 OTX1 (ENSODEG00000012071) #15 ENSODEG00000011160 ENSODEG00000011103 ENSODEG00000019821 WDPCP (ENSODEG00000011330) #16 MDH1 (ENSODEG00000011582) #17 ENSODEG00000012736 ENSODEG00000011552 #18 VPS54 (ENSODEG00000012541) #19 PELI1 (ENSODEG00000011189) #20 ENSODEG00000011901 LGALSL (ENSODEG00000011485) #21 ENSODEG00000011805 #22 SERTAD2 (ENSODEG00000011523) #23 SLC1A4 (ENSODEG00000011406) #24 ENSODEG00000011248 #26 ENSODEG00000010956 #27 SPRED2 (ENSODEG00000012243) #28 ENSODEG00000012312 MEIS1 (ENSODEG00000012314) #30 ENSODEG00000011242 #32 ENSODEG00000019812 ENSODEG00000011043 #34 PNO1 (ENSODEG00000011769) #33 PPP3R1 (ENSODEG00000012397) #35 CNRIP1 (ENSODEG00000011175) #36 PLEK (ENSODEG00000011044) #37 FBXO48 (ENSODEG00000011400) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000046505 ENSHGLG00000035774 #9 ENSHGLG00000008287 #11 TMEM17 (ENSHGLG00000007663) #13 EHBP1 (ENSHGLG00000007334) #14 OTX1 (ENSHGLG00000007005) #15 ENSHGLG00000039651 WDPCP (ENSHGLG00000005902) #16 ENSHGLG00000034790 MDH1 (ENSHGLG00000033109) #17 UGP2 (ENSHGLG00000005211) #18 VPS54 (ENSHGLG00000004813) #19 ENSHGLG00000033380 PELI1 (ENSHGLG00000033688) #20 ENSHGLG00000035846 #21 ENSHGLG00000004286 #22 ENSHGLG00000004348 ENSHGLG00000047996 #23 ENSHGLG00000049432 SLC1A4 (ENSHGLG00000036619) #24 ENSHGLG00000048375 #25 CEP68 (ENSHGLG00000018361) #25 RAB1A (ENSHGLG00000045077) #26 ENSHGLG00000037092 ENSHGLG00000042711 #28 ENSHGLG00000034618 ENSHGLG00000041829 ENSHGLG00000013407 MEIS1 (ENSHGLG00000012586) #30 ENSHGLG00000020742 ETAA1 (ENSHGLG00000040625) #31 Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000014716 ENSHGLG00000014451 ENSHGLG00000014349 ENSHGLG00000048724 ENSHGLG00000036112 ENSHGLG00000013450 ENSHGLG00000000663 ENSHGLG00000013672 ENSHGLG00000020760 ENSHGLG00000038492 KPNA4 (ENSHGLG00000012364) ENSHGLG00000012199 TRIM59 (ENSHGLG00000046594) SMC4 (ENSHGLG00000011736) IFT80 (ENSHGLG00000011237) ENSHGLG00000038484 #22 ENSHGLG00000036824 C3orf80 (ENSHGLG00000032252) ENSHGLG00000044386 IL12A (ENSHGLG00000014587) ENSHGLG00000014551 ENSHGLG00000021053 MFSD1 (ENSHGLG00000016907) RARRES1 (ENSHGLG00000049842) GFM1 (ENSHGLG00000016855) LXN (ENSHGLG00000033224) ENSHGLG00000000559 MLF1 (ENSHGLG00000016829) RSRC1 (ENSHGLG00000018148) ENSHGLG00000039235 ENSHGLG00000044928 Naked mole-rat female MODERN SPECIES 20 CHST8 (ENSHGLG00000008720) KCTD15 (ENSHGLG00000034885) ENSHGLG00000042419 ENSHGLG00000007321 GARRE1 (ENSHGLG00000013898) Gpi (ENSHGLG00000015058) PDCD2L (ENSHGLG00000019039) UBA2 (ENSHGLG00000013209) WTIP (ENSHGLG00000044055) ENSHGLG00000013473 ENSHGLG00000037952 ENSHGLG00000041394 ENSHGLG00000044339 ENSHGLG00000009826 ZNF599 (ENSHGLG00000047822) ENSHGLG00000013668 #22 ENSHGLG00000006199 ENSHGLG00000041073 ENSHGLG00000010197 ENSHGLG00000009065 GRAMD1A (ENSHGLG00000015255) SCN1B (ENSHGLG00000018069) HPN (ENSHGLG00000014368) ENSHGLG00000015814 LGI4 (ENSHGLG00000018052) FXYD1 (ENSHGLG00000015284) ENSHGLG00000040719 LSR (ENSHGLG00000006626) FAM187B (ENSHGLG00000034675) ENSHGLG00000045924 USF2 (ENSHGLG00000011485) Lagomorpha ANCESTRAL SPECIES 10 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824.c ENSGT00550000074956 #7 ENSGT00390000012029 #9 ENSGT00940000155345 #11 ENSGT00940000153899.b.b #13 ENSGT00940000157597 #14 ENSGT00940000161234 #15 ENSGT00390000016551 #16 ENSGT00530000063410.a #17 ENSGT00940000153464.B #18 ENSGT00390000000583 #19 ENSGT00950000183050.b.b.a #20 ENSGT00940000155337 #21 ENSGT00940000154186.a #22 ENSGT00530000063867.b #23 ENSGT00940000157081 #24 ENSGT00810000125473.A #25 ENSGT00940000154958 #26 ENSGT00940000154556.lb.a #27 ENSGT00940000156841 #28 ENSGT00940000156327 #30 ENSGT00390000009597 #31 ENSGT00390000015405 #32 ENSGT00950000183091.A.b #34 ENSGT00390000018052 #33 ENSGT00940000156530.c #35 ENSGT00390000004284 #36 ENSGT00940000157885 #37 ENSGT00390000012248 Rabbit MODERN SPECIES 11 ENSOCUG00000000707 CCT4 (ENSOCUG00000024386) #7 COMMD1 (ENSOCUG00000001093) #9 B3GNT2 (ENSOCUG00000017281) #11 TMEM17 (ENSOCUG00000010487) #13 ENSOCUG00000037865 EHBP1 (ENSOCUG00000013563) #14 OTX1 (ENSOCUG00000021773) #15 WDPCP (ENSOCUG00000006156) #16 MDH1 (ENSOCUG00000006166) #17 ENSOCUG00000002137 #18 VPS54 (ENSOCUG00000002143) #19 PELI1 (ENSOCUG00000027961) #20 ENSOCUG00000031191 LGALSL (ENSOCUG00000013957) #21 AFTPH (ENSOCUG00000006390) #22 SERTAD2 (ENSOCUG00000008192) #23 ENSOCUG00000010821 #24 CEP68 (ENSOCUG00000016996) #25 RAB1A (ENSOCUG00000017003) #26 ACTR2 (ENSOCUG00000004906) #27 SPRED2 (ENSOCUG00000004913) #28 ENSOCUG00000034052 MEIS1 (ENSOCUG00000001842) #30 ETAA1 (ENSOCUG00000001812) #31 ENSOCUG00000009771 #32 DNAAF10 (ENSOCUG00000006087) #34 ENSOCUG00000006100 #33 PPP3R1 (ENSOCUG00000027562) #35 CNRIP1 (ENSOCUG00000006109) #36 PLEK (ENSOCUG00000006113) #37 Pika MODERN SPECIES 602 ENSOPRG00000013391 #22