Gnathostomata	ANCESTRAL SPECIES	776														ENSGT00940000156939 #16	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23
Euteleostomi	ANCESTRAL SPECIES	718														ENSGT00940000156939 #16	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23
Sarcopterygii	ANCESTRAL SPECIES	623														ENSGT00940000156939 #16	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23
Tetrapoda	ANCESTRAL SPECIES	154												ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000160843 #26	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00390000004417.b	ENSGT01030000234613.a.b	ENSGT00390000008749.f	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455
Amniota	ANCESTRAL SPECIES	38	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a #33	ENSGT00940000156011	ENSGT00390000015052.i.a	ENSGT00940000157894	ENSGT00500000044916
Mammalia	ANCESTRAL SPECIES	13	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000166352	ENSGT00940000166300	ENSGT01100000263557.A.b.a.a #33	ENSGT00940000156011	ENSGT00390000015052.i.a
Theria	ANCESTRAL SPECIES	17	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT00940000167783	ENSGT00940000156011	ENSGT00390000015052.i.a
Eutheria	ANCESTRAL SPECIES	19	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Primates	ANCESTRAL SPECIES	21	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.b
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328.c.b #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a ##37
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328.c.b #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a ##37
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.b.b.a.b.b.b #13	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328.c.b #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000167783
Rhesus	MODERN SPECIES	12	CNOT1 (ENSMMUG00000014625) #7	SETD6 (ENSMMUG00000014621) #8	NDRG4 (ENSMMUG00000014618) #9	GINS3 (ENSMMUG00000009109) #10	PRSS54 (ENSMMUG00000019451) #11	CCDC113 (ENSMMUG00000054015) #12	ENSMMUG00000059448 #13	CSNK2A2 (ENSMMUG00000015892) #14	CFAP20 (ENSMMUG00000015891) #15	MMP15 (ENSMMUG00000007052) #16	USB1 (ENSMMUG00000022669) #17	TEPP (ENSMMUG00000022666) #18	ENSMMUG00000057839 #19	ZNF319 (ENSMMUG00000022668) #20	ENSMMUG00000052020 #21	KIFC3 (ENSMMUG00000015696) #22	KATNB1 (ENSMMUG00000015695) #23	DRC7 (ENSMMUG00000015692) #24	ADGRG3 (ENSMMUG00000015690) #25	ADGRG1 (ENSMMUG00000015689) #26	ADGRG5 (ENSMMUG00000011980) #27	CCDC102A (ENSMMUG00000020394) #28	DOK4 (ENSMMUG00000020475) #29	POLR2C (ENSMMUG00000020474) #30	ENSMMUG00000020473 #31	CIAPIN1 (ENSMMUG00000020472) #32	CCL17 (ENSMMUG00000058419) #33	ENSMMUG00000057621 #34	CX3CL1 (ENSMMUG00000059578) #35	CCL22 (ENSMMUG00000052508) #36	ENSMMUG00000022951 #37
Crab-eating macaque	MODERN SPECIES	12	PRSS54 (ENSMFAG00000045884) #11	CCDC113 (ENSMFAG00000030602) #12	ENSMFAG00000048270 #13	CSNK2A2 (ENSMFAG00000043132) #14	CFAP20 (ENSMFAG00000007227) #15	ENSMFAG00000054497	MMP15 (ENSMFAG00000034123) #16	USB1 (ENSMFAG00000003926) #17	ZNF319 (ENSMFAG00000052672)	ENSMFAG00000040561 #18	ENSMFAG00000000193	ENSMFAG00000054295	ENSMFAG00000054031	ENSMFAG00000048814 ##13	ENSMFAG00000055069 #21	KIFC3 (ENSMFAG00000000179) #22	KATNB1 (ENSMFAG00000043372) #23	DRC7 (ENSMFAG00000038450) #24	ADGRG3 (ENSMFAG00000030742) #25	ADGRG1 (ENSMFAG00000002223) #26	ENSMFAG00000048192	ADGRG5 (ENSMFAG00000044983) #27	CCDC102A (ENSMFAG00000031763) #28	DOK4 (ENSMFAG00000002708) #29	POLR2C (ENSMFAG00000016861) #30	ENSMFAG00000045196 #31	CIAPIN1 (ENSMFAG00000000222) #32	CCL17 (ENSMFAG00000062105) #33	CX3CL1 (ENSMFAG00000056311) #35	ENSMFAG00000051626	ENSMFAG00000032545
Pig-tailed macaque	MODERN SPECIES	178	SLC38A7 (ENSMNEG00000044122)	CNOT1 (ENSMNEG00000031820) #7	SETD6 (ENSMNEG00000043306) #8	NDRG4 (ENSMNEG00000042324) #9	GINS3 (ENSMNEG00000031079) #10	PRSS54 (ENSMNEG00000027374) #11	CCDC113 (ENSMNEG00000028188) #12	CSNK2A2 (ENSMNEG00000027967) #14	CFAP20 (ENSMNEG00000036695) #15	ENSMNEG00000037709	MMP15 (ENSMNEG00000037386) #16	USB1 (ENSMNEG00000042487) #17	ZNF319 (ENSMNEG00000020532)	TEPP (ENSMNEG00000033531) #18	CNGB1 (ENSMNEG00000040371) #20	KIFC3 (ENSMNEG00000041153) #22	KATNB1 (ENSMNEG00000038411) #23	DRC7 (ENSMNEG00000039153) #24	ADGRG3 (ENSMNEG00000041589) #25
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328.d ##31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a ##37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328.d ##31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a ##37
Sooty mangabey	MODERN SPECIES	96	SLC38A7 (ENSCATG00000037893)	CNOT1 (ENSCATG00000032625) #7	SETD6 (ENSCATG00000034972) #8	NDRG4 (ENSCATG00000044457) #9	GINS3 (ENSCATG00000041344) #10	PRSS54 (ENSCATG00000036971) #11	CCDC113 (ENSCATG00000038695) #12	CSNK2A2 (ENSCATG00000022640) #14	CFAP20 (ENSCATG00000030766) #15	ENSCATG00000018766	MMP15 (ENSCATG00000041035) #16	USB1 (ENSCATG00000032174) #17	ZNF319 (ENSCATG00000002643)	TEPP (ENSCATG00000041351) #18	CNGB1 (ENSCATG00000015907) #20	KIFC3 (ENSCATG00000041314) #22	KATNB1 (ENSCATG00000033091) #23	DRC7 (ENSCATG00000042324) #24	ADGRG3 (ENSCATG00000040559) #25	ADGRG1 (ENSCATG00000040976) #26	ENSCATG00000000121	ADGRG5 (ENSCATG00000040785) #27	CCDC102A (ENSCATG00000044153) #28	DOK4 (ENSCATG00000037359) #29	POLR2C (ENSCATG00000040803) #30	COQ9 (ENSCATG00000040624) ##31	CIAPIN1 (ENSCATG00000038186) #32	CCL17 (ENSCATG00000041970) #33	CX3CL1 (ENSCATG00000042656) #35	CCL22 (ENSCATG00000041192) #36	ENSCATG00000042359 ##37
Drill	MODERN SPECIES	300						PRSS54 (ENSMLEG00000039226) #11	CCDC113 (ENSMLEG00000035473) #12	CSNK2A2 (ENSMLEG00000027213) #14	CFAP20 (ENSMLEG00000041801) #15	ENSMLEG00000036981	MMP15 (ENSMLEG00000028293) #16	USB1 (ENSMLEG00000028756) #17	ZNF319 (ENSMLEG00000027270)	TEPP (ENSMLEG00000039683) #18	CNGB1 (ENSMLEG00000022032) #20	KIFC3 (ENSMLEG00000032899) #22	KATNB1 (ENSMLEG00000030150) #23	DRC7 (ENSMLEG00000027882) #24	ADGRG3 (ENSMLEG00000038843) #25	ADGRG1 (ENSMLEG00000006815) #26	ENSMLEG00000027369	ADGRG5 (ENSMLEG00000036836) #27	CCDC102A (ENSMLEG00000031800) #28	DOK4 (ENSMLEG00000030424) #29	POLR2C (ENSMLEG00000032412) #30	COQ9 (ENSMLEG00000043341) ##31	CIAPIN1 (ENSMLEG00000036655) #32	CCL17 (ENSMLEG00000040712) #33	CX3CL1 (ENSMLEG00000027847) #35	CCL22 (ENSMLEG00000043269) #36	ENSMLEG00000040030 ##37
Olive baboon	MODERN SPECIES	9	ENSPANG00000041124 #7	ENSPANG00000020901 #7	SETD6 (ENSPANG00000017644) #8	NDRG4 (ENSPANG00000007666) #9	GINS3 (ENSPANG00000017093) #10	ENSPANG00000040458	PRSS54 (ENSPANG00000019623) #11	CCDC113 (ENSPANG00000021080) #12	CSNK2A2 (ENSPANG00000041238) #14	CFAP20 (ENSPANG00000042803) #15	MMP15 (ENSPANG00000019364) #16	USB1 (ENSPANG00000025138) #17	ZNF319 (ENSPANG00000041533)	TEPP (ENSPANG00000005253) #18	CNGB1 (ENSPANG00000024220) #20	KIFC3 (ENSPANG00000023899) #22	KATNB1 (ENSPANG00000005759) #23	DRC7 (ENSPANG00000016799) #24	ADGRG3 (ENSPANG00000023387) #25	ADGRG1 (ENSPANG00000008438) #26	ADGRG5 (ENSPANG00000020447) #27	CCDC102A (ENSPANG00000007403) #28	DOK4 (ENSPANG00000011496) #29	POLR2C (ENSPANG00000006264) #30	ENSPANG00000009190 #31	CIAPIN1 (ENSPANG00000000544) #32	CCL17 (ENSPANG00000026488) #33	CX3CL1 (ENSPANG00000046939) #35	ENSPANG00000048992	ENSPANG00000038786	ENSPANG00000050426
Vervet Monkey	MODERN SPECIES	24	SLC38A7 (ENSCSAG00000004703)	CNOT1 (ENSCSAG00000004731) #7	SETD6 (ENSCSAG00000004711) #8	NDRG4 (ENSCSAG00000004744) #9	GINS3 (ENSCSAG00000004750) #10	PRSS54 (ENSCSAG00000004759) #11	CCDC113 (ENSCSAG00000004767) #12	CSNK2A2 (ENSCSAG00000004772) #14	CFAP20 (ENSCSAG00000004774) #15	MMP15 (ENSCSAG00000004779) #16	USB1 (ENSCSAG00000004783) #17	ZNF319 (ENSCSAG00000018864)	TEPP (ENSCSAG00000004796) #18	ENSCSAG00000004825	ENSCSAG00000004840 #21	KIFC3 (ENSCSAG00000004843) #22	KATNB1 (ENSCSAG00000004849) #23	DRC7 (ENSCSAG00000004857) #24	ADGRG3 (ENSCSAG00000004865) #25	ADGRG1 (ENSCSAG00000004867) #26	ADGRG5 (ENSCSAG00000004878) #27	CCDC102A (ENSCSAG00000004884) #28	DOK4 (ENSCSAG00000004888) #29	POLR2C (ENSCSAG00000004901) #30	COQ9 (ENSCSAG00000004907) #31	CIAPIN1 (ENSCSAG00000004912) #32	CCL17 (ENSCSAG00000004915) #33	CX3CL1 (ENSCSAG00000004917) #35	CCL22 (ENSCSAG00000004920) #36	PLLP (ENSCSAG00000004923)	ARL2BP (ENSCSAG00000004927)
Rhinopithecus	ANCESTRAL SPECIES	62	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Golden snub-nosed monkey	MODERN SPECIES	1220					ENSRROG00000041750	ENSRROG00000036562	CSNK2A2 (ENSRROG00000031963) #14	CFAP20 (ENSRROG00000039327) #15	ENSRROG00000039879	MMP15 (ENSRROG00000031176) #16	USB1 (ENSRROG00000029211) #17	ZNF319 (ENSRROG00000022257)	TEPP (ENSRROG00000034390) #18	CNGB1 (ENSRROG00000042347) #20	ENSRROG00000035085 #21	KIFC3 (ENSRROG00000030816) #22	KATNB1 (ENSRROG00000042948) #23	DRC7 (ENSRROG00000045119) #24	ADGRG3 (ENSRROG00000042593) #25	ADGRG1 (ENSRROG00000045581) #26	ENSRROG00000035328	ADGRG5 (ENSRROG00000031760) #27	CCDC102A (ENSRROG00000029144) #28	DOK4 (ENSRROG00000034329) #29	POLR2C (ENSRROG00000045745) #30	COQ9 (ENSRROG00000030153) #31	CIAPIN1 (ENSRROG00000037270) #32	CCL17 (ENSRROG00000031180) #33	CX3CL1 (ENSRROG00000041836) #35	CCL22 (ENSRROG00000045043) #36	PLLP (ENSRROG00000020437)
Black snub-nosed monkey	MODERN SPECIES	612	SETD6 (ENSRBIG00000037883) #8	NDRG4 (ENSRBIG00000041446) #9	GINS3 (ENSRBIG00000039849) #10	PRSS54 (ENSRBIG00000025281) #11	ENSRBIG00000032194	CCDC113 (ENSRBIG00000039715) #12	CSNK2A2 (ENSRBIG00000030026) #14	CFAP20 (ENSRBIG00000028425) #15	ENSRBIG00000040990	MMP15 (ENSRBIG00000037648) #16	USB1 (ENSRBIG00000044466) #17	ZNF319 (ENSRBIG00000030200)	TEPP (ENSRBIG00000042385) #18	CNGB1 (ENSRBIG00000041627) #20	ENSRBIG00000016162 #21	KIFC3 (ENSRBIG00000034640) #22	KATNB1 (ENSRBIG00000039352) #23	DRC7 (ENSRBIG00000028804) #24	ADGRG3 (ENSRBIG00000028733) #25	ADGRG1 (ENSRBIG00000030383) #26	ENSRBIG00000044187	ADGRG5 (ENSRBIG00000030334) #27	CCDC102A (ENSRBIG00000000073) #28	DOK4 (ENSRBIG00000037651) #29	POLR2C (ENSRBIG00000026549) #30	COQ9 (ENSRBIG00000044633) #31	CIAPIN1 (ENSRBIG00000038248) #32	CCL17 (ENSRBIG00000040165) #33	CX3CL1 (ENSRBIG00000034717) #35	CCL22 (ENSRBIG00000035917) #36	PLLP (ENSRBIG00000033542)
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00910000147437	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.a #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Hominidae	ANCESTRAL SPECIES	9	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.a #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.a #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.b
Gorilla	MODERN SPECIES	7	ENSGGOG00000009544 #8	NDRG4 (ENSGGOG00000009535) #9	GINS3 (ENSGGOG00000028093) #10	PRSS54 (ENSGGOG00000041006) #11	CCDC113 (ENSGGOG00000013504) #12	ENSGGOG00000022064 #14	CSNK2A2 (ENSGGOG00000025458) #14	CFAP20 (ENSGGOG00000005488) #15	ENSGGOG00000043182	MMP15 (ENSGGOG00000000025) #16	USB1 (ENSGGOG00000017147) #17	ZNF319 (ENSGGOG00000017145)	ENSGGOG00000017140 #18	CNGB1 (ENSGGOG00000017130) #20	ENSGGOG00000039299 #21	KIFC3 (ENSGGOG00000007147) #22	KATNB1 (ENSGGOG00000007134) #23	DRC7 (ENSGGOG00000008464) #24	ADGRG3 (ENSGGOG00000008456) #25	ADGRG1 (ENSGGOG00000008446) #26	ADGRG5 (ENSGGOG00000014215) #27	ENSGGOG00000023878 #28	DOK4 (ENSGGOG00000012426) #29	POLR2C (ENSGGOG00000012415) #30	COQ9 (ENSGGOG00000012407) #31	CIAPIN1 (ENSGGOG00000012402) #32	CCL17 (ENSGGOG00000001825) #33	CX3CL1 (ENSGGOG00000000578) #35	CCL22 (ENSGGOG00000043845) #36	PLLP (ENSGGOG00000023257)	ARL2BP (ENSGGOG00000005471)
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.a #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.b
Pan	ANCESTRAL SPECIES	19	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00390000005764.g.b	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154824.b #20	ENSGT00390000002684 #21	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.a #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.b
Bonobo	MODERN SPECIES	7	CNOT1 (ENSPPAG00000022013) #7	ENSPPAG00000028988 #8	NDRG4 (ENSPPAG00000037280) #9	GINS3 (ENSPPAG00000035000) #10	PRSS54 (ENSPPAG00000039795) #11	CCDC113 (ENSPPAG00000043813) #12	CSNK2A2 (ENSPPAG00000039756) #14	CFAP20 (ENSPPAG00000038314) #15	ENSPPAG00000034673	MMP15 (ENSPPAG00000041101) #16	USB1 (ENSPPAG00000042137) #17	ZNF319 (ENSPPAG00000023652)	ENSPPAG00000042431 #18	CNGB1 (ENSPPAG00000037334) #20	ENSPPAG00000029421 #21	KIFC3 (ENSPPAG00000013413) #22	KATNB1 (ENSPPAG00000037310) #23	DRC7 (ENSPPAG00000037571) #24	ADGRG3 (ENSPPAG00000037883) #25	ADGRG1 (ENSPPAG00000027907) #26	ADGRG5 (ENSPPAG00000038034) #27	ENSPPAG00000036159 #28	DOK4 (ENSPPAG00000034269) #29	POLR2C (ENSPPAG00000042822) #30	COQ9 (ENSPPAG00000010633) #31	CIAPIN1 (ENSPPAG00000041694) #32	CCL17 (ENSPPAG00000041067) #33	CX3CL1 (ENSPPAG00000036505) #35	CCL22 (ENSPPAG00000041081) #36	PLLP (ENSPPAG00000029282)	ARL2BP (ENSPPAG00000036337)
Chimpanzee	MODERN SPECIES	7	SETD6 (ENSPTRG00000008182) #8	NDRG4 (ENSPTRG00000008181) #9	GINS3 (ENSPTRG00000008179) #10	PRSS54 (ENSPTRG00000008178) #11	ENSPTRG00000034281	CCDC113 (ENSPTRG00000008176) #12	CSNK2A2 (ENSPTRG00000008175) #14	CFAP20 (ENSPTRG00000008174) #15	ENSPTRG00000044572	MMP15 (ENSPTRG00000008173) #16	USB1 (ENSPTRG00000008172) #17	ZNF319 (ENSPTRG00000031195)	ENSPTRG00000008170 #18	CNGB1 (ENSPTRG00000008169)	ENSPTRG00000008168 #21	KIFC3 (ENSPTRG00000008167) #22	KATNB1 (ENSPTRG00000008166) #23	DRC7 (ENSPTRG00000008165) #24	ADGRG3 (ENSPTRG00000008164) #25	ADGRG1 (ENSPTRG00000031199) #26	ADGRG5 (ENSPTRG00000008161) #27	CCDC102A (ENSPTRG00000008159) #28	DOK4 (ENSPTRG00000008158) #29	POLR2C (ENSPTRG00000008157) #30	COQ9 (ENSPTRG00000008156) #31	CIAPIN1 (ENSPTRG00000008155) #32	CCL17 (ENSPTRG00000046463) #33	CX3CL1 (ENSPTRG00000008153) #35	CCL22 (ENSPTRG00000047829) #36	PLLP (ENSPTRG00000008151)	ARL2BP (ENSPTRG00000008150)
Human	MODERN SPECIES	7	GOT2 (ENSG00000125166)	SLC38A7 (ENSG00000103042)	CNOT1 (ENSG00000125107) #7	SETD6 (ENSG00000103037) #8	NDRG4 (ENSG00000103034) #9	GINS3 (ENSG00000181938) #10	PRSS54 (ENSG00000103023) #11	CCDC113 (ENSG00000103021) #12	CSNK2A2 (ENSG00000070770) #14	CFAP20 (ENSG00000070761) #15	MMP15 (ENSG00000102996) #16	USB1 (ENSG00000103005) #17	ZNF319 (ENSG00000166188)	TEPP (ENSG00000159648) #18	CNGB1 (ENSG00000070729) #20	KIFC3 (ENSG00000140859) #22	KATNB1 (ENSG00000140854) #23	DRC7 (ENSG00000159625) #24	ADGRG3 (ENSG00000182885) #25	ADGRG1 (ENSG00000205336) #26	ADGRG5 (ENSG00000159618) #27	CCDC102A (ENSG00000135736) #28	DOK4 (ENSG00000125170) #29	POLR2C (ENSG00000102978) #30	COQ9 (ENSG00000088682) #31	CIAPIN1 (ENSG00000005194) #32	CCL17 (ENSG00000102970) #33	CX3CL1 (ENSG00000006210) #35	CCL22 (ENSG00000102962) #36	PLLP (ENSG00000102934)	ARL2BP (ENSG00000102931)
Orangutan	MODERN SPECIES	7	CNOT1 (ENSPPYG00000007410) #7	SETD6 (ENSPPYG00000007409) #8	ENSPPYG00000007408 #9	GINS3 (ENSPPYG00000007407) #10	PRSS54 (ENSPPYG00000007406) #11	CCDC113 (ENSPPYG00000007405) #12	CSNK2A2 (ENSPPYG00000007404) #14	ENSPPYG00000034784	CFAP20 (ENSPPYG00000007403) #15	MMP15 (ENSPPYG00000007402) #16	USB1 (ENSPPYG00000007401) #17	ZNF319 (ENSPPYG00000033939)	ENSPPYG00000007709 #18	ENSPPYG00000033490	ENSPPYG00000007400	KIFC3 (ENSPPYG00000007398) #22	KATNB1 (ENSPPYG00000007397) #23	DRC7 (ENSPPYG00000007396) #24	ADGRG3 (ENSPPYG00000007395) #25	ADGRG1 (ENSPPYG00000007394) #26	ADGRG5 (ENSPPYG00000007393) #27	CCDC102A (ENSPPYG00000007392) #28	DOK4 (ENSPPYG00000007391) #29	POLR2C (ENSPPYG00000037763) #30	COQ9 (ENSPPYG00000007389) #31	CIAPIN1 (ENSPPYG00000007388) #32	ENSPPYG00000007387 #33	CX3CL1 (ENSPPYG00000007386) #35	CCL22 (ENSPPYG00000029968) #36	PLLP (ENSPPYG00000007385)	ARL2BP (ENSPPYG00000007384)
Gibbon	MODERN SPECIES	11	CNOT1 (ENSNLEG00000003566) #7	SETD6 (ENSNLEG00000030055) #8	NDRG4 (ENSNLEG00000003445) #9	GINS3 (ENSNLEG00000034569) #10	PRSS54 (ENSNLEG00000003411) #11	ENSNLEG00000003407 #12	CSNK2A2 (ENSNLEG00000003403) #14	CFAP20 (ENSNLEG00000027683) #15	ENSNLEG00000028277	MMP15 (ENSNLEG00000003342) #16	USB1 (ENSNLEG00000003340) #17	ZNF319 (ENSNLEG00000034617)	ENSNLEG00000003336 #18	CNGB1 (ENSNLEG00000003301) #20	ENSNLEG00000003296 #21	KIFC3 (ENSNLEG00000003191) #22	KATNB1 (ENSNLEG00000003185) #23	DRC7 (ENSNLEG00000003176) #24	ADGRG3 (ENSNLEG00000003162) #25	ENSNLEG00000003129 #26	ENSNLEG00000032241	ADGRG5 (ENSNLEG00000003094) #27	CCDC102A (ENSNLEG00000003056) #28	DOK4 (ENSNLEG00000003039) #29	POLR2C (ENSNLEG00000003034) #30	ENSNLEG00000003029 #31	CIAPIN1 (ENSNLEG00000002876) #32	ENSNLEG00000002873	CCL17 (ENSNLEG00000002869) #33	CX3CL1 (ENSNLEG00000002854) #35	CCL22 (ENSNLEG00000032652) #36
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622.a #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.c #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.a
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622.a #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.c #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.a
Cebidae_a	ANCESTRAL SPECIES	89	ENSGT00940000165383	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622.a #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.k.c #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.o.a
Bolivian squirrel monkey	MODERN SPECIES	225	ENSSBOG00000027227	ENSSBOG00000027795	CNOT1 (ENSSBOG00000029155) #7	SETD6 (ENSSBOG00000030542) #8	NDRG4 (ENSSBOG00000020958) #9	GINS3 (ENSSBOG00000034430) #10	PRSS54 (ENSSBOG00000023024) #11	CCDC113 (ENSSBOG00000031812) #12	CSNK2A2 (ENSSBOG00000026396) #14	CFAP20 (ENSSBOG00000025757) #15	MMP15 (ENSSBOG00000020866) #16	USB1 (ENSSBOG00000029362) #17	ZNF319 (ENSSBOG00000018861)	TEPP (ENSSBOG00000030652) #18	ENSSBOG00000025495	KIFC3 (ENSSBOG00000024774) #22	KATNB1 (ENSSBOG00000011946) #23	DRC7 (ENSSBOG00000030634) #24	ADGRG3 (ENSSBOG00000024203) #25	ADGRG1 (ENSSBOG00000030166) #26	ADGRG5 (ENSSBOG00000032008) #27	CCDC102A (ENSSBOG00000027183) #28	DOK4 (ENSSBOG00000028919) #29	POLR2C (ENSSBOG00000030004) #30	COQ9 (ENSSBOG00000030701) #31	CIAPIN1 (ENSSBOG00000020126) #32	CCL17 (ENSSBOG00000019627) #33	CX3CL1 (ENSSBOG00000030618) #35	CCL22 (ENSSBOG00000025154) #36	PLLP (ENSSBOG00000019417)	ENSSBOG00000031775
Capuchin	MODERN SPECIES	297	ENSCCAG00000037879	SLC38A7 (ENSCCAG00000023373)	CNOT1 (ENSCCAG00000026333) #7	SETD6 (ENSCCAG00000037152) #8	NDRG4 (ENSCCAG00000029223) #9	GINS3 (ENSCCAG00000001219) #10	PRSS54 (ENSCCAG00000037893) #11	CCDC113 (ENSCCAG00000036389) #12	CSNK2A2 (ENSCCAG00000026530) #14	CFAP20 (ENSCCAG00000033141) #15	MMP15 (ENSCCAG00000032522) #16	USB1 (ENSCCAG00000022132) #17	ZNF319 (ENSCCAG00000020232)	TEPP (ENSCCAG00000034017) #18	CNGB1 (ENSCCAG00000037806) #20	KIFC3 (ENSCCAG00000026908) #22	KATNB1 (ENSCCAG00000034692) #23	DRC7 (ENSCCAG00000036321) #24	ADGRG3 (ENSCCAG00000027411) #25	ADGRG1 (ENSCCAG00000028966) #26	ADGRG5 (ENSCCAG00000027391) #27	CCDC102A (ENSCCAG00000034007) #28	DOK4 (ENSCCAG00000022563) #29	POLR2C (ENSCCAG00000035768) #30	COQ9 (ENSCCAG00000031727) #31	CIAPIN1 (ENSCCAG00000014563) #32	CCL17 (ENSCCAG00000029966) #33	CX3CL1 (ENSCCAG00000036310) #35	CCL22 (ENSCCAG00000030834) #36	PLLP (ENSCCAG00000025306)	ARL2BP (ENSCCAG00000025679)
Marmoset	MODERN SPECIES	12	SETD6 (ENSCJAG00000011535) #8	ENSCJAG00000075690	NDRG4 (ENSCJAG00000011550) #9	GINS3 (ENSCJAG00000072367) #10	PRSS54 (ENSCJAG00000086163) #11	CCDC113 (ENSCJAG00000011662) #12	CSNK2A2 (ENSCJAG00000011673) #14	CFAP20 (ENSCJAG00000011700) #15	MMP15 (ENSCJAG00000011709) #16	USB1 (ENSCJAG00000011733) #17	ZNF319 (ENSCJAG00000077794)	TEPP (ENSCJAG00000011752) #18	ENSCJAG00000071358	ENSCJAG00000011758	ENSCJAG00000072568	KIFC3 (ENSCJAG00000011810) #22	KATNB1 (ENSCJAG00000011825) #23	DRC7 (ENSCJAG00000011862) #24	ADGRG3 (ENSCJAG00000011884) #25	ADGRG1 (ENSCJAG00000011920) #26	ENSCJAG00000072240 ##13	ADGRG5 (ENSCJAG00000011956) #27	CCDC102A (ENSCJAG00000011982) #28	DOK4 (ENSCJAG00000011994) #29	POLR2C (ENSCJAG00000012016) #30	COQ9 (ENSCJAG00000012043) #31	CIAPIN1 (ENSCJAG00000012055) #32	CCL17 (ENSCJAG00000083701) #33	CX3CL1 (ENSCJAG00000075185) #35	CCL22 (ENSCJAG00000086967) #36	PLLP (ENSCJAG00000084499)
Mas night monkey	MODERN SPECIES	968	CCDC113 (ENSANAG00000020651) #12	PRSS54 (ENSANAG00000000490) #11	ENSANAG00000023206 #10	NDRG4 (ENSANAG00000033593) #9	SETD6 (ENSANAG00000024165) #8	CNOT1 (ENSANAG00000038198) #7	SLC38A7 (ENSANAG00000019595)	ENSANAG00000036839	GOT2 (ENSANAG00000032779)	CFAP20 (ENSANAG00000030496) #15	MMP15 (ENSANAG00000038210) #16	USB1 (ENSANAG00000035640) #17	ZNF319 (ENSANAG00000019739)	TEPP (ENSANAG00000021355) #18	CNGB1 (ENSANAG00000025998) #20	KIFC3 (ENSANAG00000024781) #22	KATNB1 (ENSANAG00000034340) #23	DRC7 (ENSANAG00000034106) #24	ADGRG3 (ENSANAG00000026238) #25	ADGRG1 (ENSANAG00000034227) #26	ADGRG5 (ENSANAG00000032339) #27	CCDC102A (ENSANAG00000030176) #28	DOK4 (ENSANAG00000027162) #29	POLR2C (ENSANAG00000005302) #30	COQ9 (ENSANAG00000037786) #31	ENSANAG00000026728 #32	CCL17 (ENSANAG00000022930) #33	CX3CL1 (ENSANAG00000031673) #35	CCL22 (ENSANAG00000025656) #36	PLLP (ENSANAG00000019457)	ARL2BP (ENSANAG00000032670)
Tarsier	MODERN SPECIES	6155			CNOT1 (ENSTSYG00000006888) #7	SETD6 (ENSTSYG00000034199) #8	NDRG4 (ENSTSYG00000028724) #9	GINS3 (ENSTSYG00000013071) #10	PRSS54 (ENSTSYG00000008939) #11	CCDC113 (ENSTSYG00000013596) #12	CSNK2A2 (ENSTSYG00000011482) #14	CFAP20 (ENSTSYG00000011372) #15	MMP15 (ENSTSYG00000032392) #16	USB1 (ENSTSYG00000006997) #17	TEPP (ENSTSYG00000008238) #18	ENSTSYG00000028745	ENSTSYG00000005027	KIFC3 (ENSTSYG00000011319) #22	KATNB1 (ENSTSYG00000013861) #23	DRC7 (ENSTSYG00000002077) #24	ADGRG3 (ENSTSYG00000008104) #25	ADGRG1 (ENSTSYG00000036228) #26	ADGRG5 (ENSTSYG00000029991) #27	CCDC102A (ENSTSYG00000037465) #28	DOK4 (ENSTSYG00000035383) #29	POLR2C (ENSTSYG00000011076) #30	COQ9 (ENSTSYG00000003644) #31	CIAPIN1 (ENSTSYG00000001489) #32	CCL17 (ENSTSYG00000026740) #33	CX3CL1 (ENSTSYG00000033654) #35	CCL22 (ENSTSYG00000030420) #36	PLLP (ENSTSYG00000036420)	ENSTSYG00000004923
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00570000079722	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Lemuriformes_a	ANCESTRAL SPECIES	99	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Greater bamboo lemur	MODERN SPECIES	776																KIFC3 (ENSPSMG00000017210) #22	KATNB1 (ENSPSMG00000017121) #23	DRC7 (ENSPSMG00000017078) #24	ADGRG3 (ENSPSMG00000017038) #25	ADGRG1 (ENSPSMG00000016983) #26	ADGRG5 (ENSPSMG00000016923) #27	CCDC102A (ENSPSMG00000016890) #28	DOK4 (ENSPSMG00000016877) #29	POLR2C (ENSPSMG00000016841) #30	COQ9 (ENSPSMG00000016828) #31	CIAPIN1 (ENSPSMG00000016786) #32	CCL17 (ENSPSMG00000016730) #33	ENSPSMG00000016727	CCL22 (ENSPSMG00000016720) #36	PLLP (ENSPSMG00000016714)	ENSPSMG00000016686
Coquerels sifaka	MODERN SPECIES	388	SLC38A7 (ENSPCOG00000021947)	CNOT1 (ENSPCOG00000027139) #7	SETD6 (ENSPCOG00000022856) #8	NDRG4 (ENSPCOG00000017210) #9	GINS3 (ENSPCOG00000021715) #10	PRSS54 (ENSPCOG00000023317) #11	CCDC113 (ENSPCOG00000014266) #12	CSNK2A2 (ENSPCOG00000024673) #14	CFAP20 (ENSPCOG00000015482) #15	MMP15 (ENSPCOG00000019891) #16	USB1 (ENSPCOG00000022612) #17	ZNF319 (ENSPCOG00000007667)	TEPP (ENSPCOG00000027642) #18	ENSPCOG00000010278	CNGB1 (ENSPCOG00000025745) #20	KIFC3 (ENSPCOG00000011397) #22	KATNB1 (ENSPCOG00000017314) #23	DRC7 (ENSPCOG00000013628) #24	ADGRG3 (ENSPCOG00000023213) #25	ADGRG1 (ENSPCOG00000003482) #26	ADGRG5 (ENSPCOG00000023280) #27	CCDC102A (ENSPCOG00000020122) #28
Mouse lemur	MODERN SPECIES	12	ENSMICG00000008954	SLC38A7 (ENSMICG00000016985)	CNOT1 (ENSMICG00000007071) #7	SETD6 (ENSMICG00000007057) #8	NDRG4 (ENSMICG00000007044) #9	GINS3 (ENSMICG00000003201) #10	ENSMICG00000006644 #11	CCDC113 (ENSMICG00000046018) #12	ENSMICG00000008218 #14	CFAP20 (ENSMICG00000008226) #15	MMP15 (ENSMICG00000017360) #16	USB1 (ENSMICG00000004900) #17	ZNF319 (ENSMICG00000004897)	TEPP (ENSMICG00000004890) #18	CNGB1 (ENSMICG00000004857) #20	KIFC3 (ENSMICG00000006381) #22	KATNB1 (ENSMICG00000006372) #23	DRC7 (ENSMICG00000006360) #24	ADGRG3 (ENSMICG00000026972) #25	ADGRG1 (ENSMICG00000032819) #26	DOK4 (ENSMICG00000004679) #29	POLR2C (ENSMICG00000045178) #30	COQ9 (ENSMICG00000004671) #31	CIAPIN1 (ENSMICG00000004666) #32	CCL17 (ENSMICG00000046408) #33	CX3CL1 (ENSMICG00000033647) #35	CCL22 (ENSMICG00000042702) #36	PLLP (ENSMICG00000029246)	ENSMICG00000012467	RSPRY1 (ENSMICG00000012454)	CPNE2 (ENSMICG00000012434)
Bushbaby	MODERN SPECIES	173	GOT2 (ENSOGAG00000000551)	SLC38A7 (ENSOGAG00000000549)	CNOT1 (ENSOGAG00000000543) #7	SETD6 (ENSOGAG00000000542) #8	NDRG4 (ENSOGAG00000000541) #9	GINS3 (ENSOGAG00000000540) #10	PRSS54 (ENSOGAG00000024588) #11	CCDC113 (ENSOGAG00000003283) #12	CSNK2A2 (ENSOGAG00000003278) #14	CFAP20 (ENSOGAG00000003277) #15	MMP15 (ENSOGAG00000003275) #16	USB1 (ENSOGAG00000003273) #17	ZNF319 (ENSOGAG00000003269)	TEPP (ENSOGAG00000003264) #18	ENSOGAG00000003257	KIFC3 (ENSOGAG00000006292) #22	KATNB1 (ENSOGAG00000006290) #23	DRC7 (ENSOGAG00000016203) #24	ADGRG3 (ENSOGAG00000016197) #25	ADGRG1 (ENSOGAG00000016191) #26	ADGRG5 (ENSOGAG00000003884) #27	CCDC102A (ENSOGAG00000033410) #28	DOK4 (ENSOGAG00000016868) #29	POLR2C (ENSOGAG00000016866) #30	COQ9 (ENSOGAG00000016864) #31	CIAPIN1 (ENSOGAG00000031668) #32	CCL17 (ENSOGAG00000006979) #33	CX3CL1 (ENSOGAG00000031142) #35	ENSOGAG00000027866	PLLP (ENSOGAG00000014536)	ARL2BP (ENSOGAG00000014535)
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Glires	ANCESTRAL SPECIES	6	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Prairie vole	MODERN SPECIES	12	Slc38a7 (ENSMOCG00000013308)	Cnot1 (ENSMOCG00000017969) #7	Setd6 (ENSMOCG00000019435) #8	Ndrg4 (ENSMOCG00000019186) #9	Gins3 (ENSMOCG00000010456) #10	Prss54 (ENSMOCG00000022303) #11	Ccdc113 (ENSMOCG00000017588) #12	Csnk2a2 (ENSMOCG00000021876) #14	Cfap20 (ENSMOCG00000012774) #15	ENSMOCG00000010223	Mmp15 (ENSMOCG00000004241) #16	Usb1 (ENSMOCG00000022647) #17	Zfp319 (ENSMOCG00000005503)	Tepp (ENSMOCG00000002923) #18	Cngb1 (ENSMOCG00000010582) #20	Kifc3 (ENSMOCG00000022176) #22	Katnb1 (ENSMOCG00000008432) #23	Drc7 (ENSMOCG00000019056) #24	Adgrg3 (ENSMOCG00000002472) #25	Adgrg1 (ENSMOCG00000016207) #26	Adgrg5 (ENSMOCG00000014336) #27	Ccdc102a (ENSMOCG00000007925) #28	Dok4 (ENSMOCG00000009435) #29	Polr2c (ENSMOCG00000013652) #30	Coq9 (ENSMOCG00000021431) #31	Ciapin1 (ENSMOCG00000015912) #32	Ccl17 (ENSMOCG00000017313) #33	Cx3cl1 (ENSMOCG00000011322) #35	Ccl22 (ENSMOCG00000013272) #36	Pllp (ENSMOCG00000013812)	Arl2bp (ENSMOCG00000021516)
Northern American deer mouse	MODERN SPECIES	18	Slc38a7 (ENSPEMG00000007495)	ENSPEMG00000026593 #7	Setd6 (ENSPEMG00000000631) #8	Ndrg4 (ENSPEMG00000005871) #9	Gins3 (ENSPEMG00000027744) #10	Prss54 (ENSPEMG00000009039) #11	Ccdc113 (ENSPEMG00000010298) #12	Csnk2a2 (ENSPEMG00000029224) #14	Cfap20 (ENSPEMG00000011496) #15	Mmp15 (ENSPEMG00000012320) #16	Usb1 (ENSPEMG00000016183) #17	Zfp319 (ENSPEMG00000028896)	Tepp (ENSPEMG00000013610) #18	ENSPEMG00000025572	ENSPEMG00000018348	Kifc3 (ENSPEMG00000011707) #22	Katnb1 (ENSPEMG00000000120) #23	Drc7 (ENSPEMG00000019837) #24	Adgrg3 (ENSPEMG00000019455) #25	Adgrg1 (ENSPEMG00000004510) #26	Adgrg5 (ENSPEMG00000019150) #27	Ccdc102a (ENSPEMG00000000438) #28	Dok4 (ENSPEMG00000015614) #29	Polr2c (ENSPEMG00000014204) #30	Coq9 (ENSPEMG00000008119) #31	Ciapin1 (ENSPEMG00000011946) #32	Ccl17 (ENSPEMG00000025258) #33	ENSPEMG00000029339	Ccl22 (ENSPEMG00000020137) #36	ENSPEMG00000029140	Arl2bp (ENSPEMG00000006643)
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT00900000143332	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Chinese hamster chok1gshd	MODERN SPECIES	112	Slc38a7 (ENSCGRG00001013563)	ENSCGRG00001001590	Setd6 (ENSCGRG00001022683) #8	Cnot1 (ENSCGRG00001016365) #7	Ndrg4 (ENSCGRG00001007892) #9	Gins3 (ENSCGRG00001000318) #10	Prss54 (ENSCGRG00001018712) #11	Ccdc113 (ENSCGRG00001014002) #12	Csnk2a2 (ENSCGRG00001002993) #14	Cfap20 (ENSCGRG00001012310) #15	Mmp15 (ENSCGRG00001020478) #16	USB1 (ENSCGRG00001011243) #17	Zfp319 (ENSCGRG00001009557)	Tepp (ENSCGRG00001012906) #18	Cngb1 (ENSCGRG00001006048) #20	Kifc3 (ENSCGRG00001015854) #22	Katnb1 (ENSCGRG00001005016) #23	Drc7 (ENSCGRG00001004820) #24	Adgrg3 (ENSCGRG00001002942) #25	Adgrg1 (ENSCGRG00001013796) #26	Adgrg5 (ENSCGRG00001021484) #27	Ccdc102a (ENSCGRG00001016953) #28	Dok4 (ENSCGRG00001001122) #29	Polr2c (ENSCGRG00001019477) #30	Coq9 (ENSCGRG00001013511) #31	CIAPIN1 (ENSCGRG00001002424) #32	Ccl17 (ENSCGRG00001015970) #33	ENSCGRG00001012575	Ccl22 (ENSCGRG00001014034) #36	ENSCGRG00001000060	Pllp (ENSCGRG00001021249)
Golden Hamster	MODERN SPECIES	701	Slc38a7 (ENSMAUG00000016252)	ENSMAUG00000014000 #7	ENSMAUG00000009731 #7	Setd6 (ENSMAUG00000004853) #8	Ndrg4 (ENSMAUG00000016805) #9	Gins3 (ENSMAUG00000008574) #10	Prss54 (ENSMAUG00000000894) #11	Ccdc113 (ENSMAUG00000000235) #12	Csnk2a2 (ENSMAUG00000008176) #14	Cfap20 (ENSMAUG00000002778) #15	Mmp15 (ENSMAUG00000008723) #16	Usb1 (ENSMAUG00000007832) #17	Zfp319 (ENSMAUG00000006878)	Tepp (ENSMAUG00000000492) #18	ENSMAUG00000015513	Kifc3 (ENSMAUG00000018895) #22	ENSMAUG00000009145	Katnb1 (ENSMAUG00000012199) #23	Drc7 (ENSMAUG00000009409) #24	Adgrg3 (ENSMAUG00000011218) #25	Adgrg1 (ENSMAUG00000004640) #26	Adgrg5 (ENSMAUG00000016978) #27	Ccdc102a (ENSMAUG00000008289) #28	Dok4 (ENSMAUG00000004807) #29	ENSMAUG00000000779 #30	Coq9 (ENSMAUG00000009865) #31	Ciapin1 (ENSMAUG00000007775) #32	Ccl17 (ENSMAUG00000000481) #33	ENSMAUG00000019770	Ccl22 (ENSMAUG00000017483) #36	Pllp (ENSMAUG00000017356)
Murinae	ANCESTRAL SPECIES	15	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Mus	ANCESTRAL SPECIES	6	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Mus_A	ANCESTRAL SPECIES	8	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Mus_B	ANCESTRAL SPECIES	6	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Mus_C	ANCESTRAL SPECIES	5	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Steppe mouse	MODERN SPECIES	3188	Got2 (ENSMSIG00000006324)	Slc38a7 (ENSMSIG00000006282)	Cnot1 (ENSMSIG00000005580) #7	Setd6 (ENSMSIG00000005533) #8	Ndrg4 (ENSMSIG00000005411) #9	Gins3 (ENSMSIG00000005389) #10	Prss54 (ENSMSIG00000005343) #11	Ccdc113 (ENSMSIG00000005318) #12	ENSMSIG00000005247 #14	Cfap20 (ENSMSIG00000005199) #15	Mmp15 (ENSMSIG00000005181) #16	Usb1 (ENSMSIG00000005140) #17	Zfp319 (ENSMSIG00000005132)	ENSMSIG00000005046 #18	Cngb1 (ENSMSIG00000004859) #20	Kifc3 (ENSMSIG00000004726) #22	Katnb1 (ENSMSIG00000004682) #23	Drc7 (ENSMSIG00000004646) #24	Adgrg3 (ENSMSIG00000004596) #25	Adgrg1 (ENSMSIG00000004522) #26	Adgrg5 (ENSMSIG00000004455) #27	Ccdc102a (ENSMSIG00000004396) #28	Dok4 (ENSMSIG00000004367) #29	Polr2c (ENSMSIG00000004232) #30	Coq9 (ENSMSIG00000004128) #31	Ciapin1 (ENSMSIG00000004084) #32	Ccl17 (ENSMSIG00000004052) #33	Cx3cl1 (ENSMSIG00000004032) #35	Ccl22 (ENSMSIG00000003997) #36	Pllp (ENSMSIG00000003961)	ENSMSIG00000003803
spretus	MODERN SPECIES	17	Got2 (MGP_SPRETEiJ_G0032551)	Slc38a7 (MGP_SPRETEiJ_G0032550)	Cnot1 (MGP_SPRETEiJ_G0032549) #7	Setd6 (MGP_SPRETEiJ_G0032548) #8	Ndrg4 (MGP_SPRETEiJ_G0032547) #9	Gins3 (MGP_SPRETEiJ_G0032546) #10	Prss54 (MGP_SPRETEiJ_G0032545) #11	Ccdc113 (MGP_SPRETEiJ_G0032544) #12	Csnk2a2 (MGP_SPRETEiJ_G0032543) #14	Cfap20 (MGP_SPRETEiJ_G0032542) #15	Mmp15 (MGP_SPRETEiJ_G0032541) #16	Usb1 (MGP_SPRETEiJ_G0032540) #17	Zfp319 (MGP_SPRETEiJ_G0032539)	Tepp (MGP_SPRETEiJ_G0032538) #18	Cngb1 (MGP_SPRETEiJ_G0032537) #20	Kifc3 (MGP_SPRETEiJ_G0032536) #22	Katnb1 (MGP_SPRETEiJ_G0032535) #23	Drc7 (MGP_SPRETEiJ_G0032534) #24	Adgrg3 (MGP_SPRETEiJ_G0032533) #25	Adgrg1 (MGP_SPRETEiJ_G0032532) #26	Adgrg5 (MGP_SPRETEiJ_G0032531) #27	Ccdc102a (MGP_SPRETEiJ_G0032530) #28	Dok4 (MGP_SPRETEiJ_G0032529) #29	MGP_SPRETEiJ_G0032528 #30	Coq9 (MGP_SPRETEiJ_G0032527) #31	Ciapin1 (MGP_SPRETEiJ_G0032526) #32	Ccl17 (MGP_SPRETEiJ_G0032525) #33	Cx3cl1 (MGP_SPRETEiJ_G0032524) #35	Ccl22 (MGP_SPRETEiJ_G0032523) #36	Pllp (MGP_SPRETEiJ_G0032522)	Arl2bp (MGP_SPRETEiJ_G0032521)
Mouse	MODERN SPECIES	17	Slc38a7 (ENSMUSG00000036534)	Sap18b (ENSMUSG00000061104)	Cnot1 (ENSMUSG00000036550) #7	Setd6 (ENSMUSG00000031671) #8	Ndrg4 (ENSMUSG00000036564) #9	Gins3 (ENSMUSG00000031669) #10	Prss54 (ENSMUSG00000048400) #11	Ccdc113 (ENSMUSG00000036598) #12	Csnk2a2 (ENSMUSG00000046707) #14	Cfap20 (ENSMUSG00000031796) #15	Mmp15 (ENSMUSG00000031790) #16	Usb1 (ENSMUSG00000031792) #17	Zfp319 (ENSMUSG00000046556)	Tepp (ENSMUSG00000090206) #18	Cngb1 (ENSMUSG00000031789) #20	Kifc3 (ENSMUSG00000031788) #22	Katnb1 (ENSMUSG00000031787) #23	Drc7 (ENSMUSG00000031786) #24	Adgrg3 (ENSMUSG00000060470) #25	Adgrg1 (ENSMUSG00000031785) #26	Adgrg5 (ENSMUSG00000061577) #27	Ccdc102a (ENSMUSG00000063605) #28	Dok4 (ENSMUSG00000040631) #29	Polr2c (ENSMUSG00000031783) #30	Coq9 (ENSMUSG00000031782) #31	Ciapin1 (ENSMUSG00000031781) #32	Ccl17 (ENSMUSG00000031780) #33	Cx3cl1 (ENSMUSG00000031778) #35	Ccl22 (ENSMUSG00000031779) #36	Pllp (ENSMUSG00000031775)	Arl2bp (ENSMUSG00000031776)
Ryukyu mouse	MODERN SPECIES	17	MGP_CAROLIEiJ_G0031432	Slc38a7 (MGP_CAROLIEiJ_G0031431)	Cnot1 (MGP_CAROLIEiJ_G0031430) #7	Setd6 (MGP_CAROLIEiJ_G0031429) #8	Ndrg4 (MGP_CAROLIEiJ_G0031428) #9	Gins3 (MGP_CAROLIEiJ_G0031427) #10	Prss54 (MGP_CAROLIEiJ_G0031426) #11	Ccdc113 (MGP_CAROLIEiJ_G0031425) #12	Csnk2a2 (MGP_CAROLIEiJ_G0031424) #14	Cfap20 (MGP_CAROLIEiJ_G0031423) #15	Mmp15 (MGP_CAROLIEiJ_G0031422) #16	Usb1 (MGP_CAROLIEiJ_G0031421) #17	Zfp319 (MGP_CAROLIEiJ_G0031420)	Tepp (MGP_CAROLIEiJ_G0031419) #18	Cngb1 (MGP_CAROLIEiJ_G0031418) #20	Kifc3 (MGP_CAROLIEiJ_G0031417) #22	Katnb1 (MGP_CAROLIEiJ_G0031416) #23	Drc7 (MGP_CAROLIEiJ_G0031415) #24	Adgrg3 (MGP_CAROLIEiJ_G0031414) #25	Adgrg1 (MGP_CAROLIEiJ_G0031413) #26	Adgrg5 (MGP_CAROLIEiJ_G0031412) #27	Ccdc102a (MGP_CAROLIEiJ_G0031411) #28	Dok4 (MGP_CAROLIEiJ_G0031410) #29	MGP_CAROLIEiJ_G0031409 #30	Coq9 (MGP_CAROLIEiJ_G0031408) #31	Ciapin1 (MGP_CAROLIEiJ_G0031407) #32	Ccl17 (MGP_CAROLIEiJ_G0031406) #33	Cx3cl1 (MGP_CAROLIEiJ_G0031405) #35	Ccl22 (MGP_CAROLIEiJ_G0031404) #36	Pllp (MGP_CAROLIEiJ_G0031403)	Arl2bp (MGP_CAROLIEiJ_G0031402)
Shrew mouse	MODERN SPECIES	12	Got2 (MGP_PahariEiJ_G0023030)	Slc38a7 (MGP_PahariEiJ_G0023029)	Cnot1 (MGP_PahariEiJ_G0023028) #7	Setd6 (MGP_PahariEiJ_G0023027) #8	Ndrg4 (MGP_PahariEiJ_G0023026) #9	Gins3 (MGP_PahariEiJ_G0023025) #10	Prss54 (MGP_PahariEiJ_G0023024) #11	Ccdc113 (MGP_PahariEiJ_G0023023) #12	Csnk2a2 (MGP_PahariEiJ_G0023022) #14	Cfap20 (MGP_PahariEiJ_G0023021) #15	Mmp15 (MGP_PahariEiJ_G0023020) #16	Usb1 (MGP_PahariEiJ_G0023019) #17	Zfp319 (MGP_PahariEiJ_G0023018)	Tepp (MGP_PahariEiJ_G0023017) #18	Cngb1 (MGP_PahariEiJ_G0023016) #20	Kifc3 (MGP_PahariEiJ_G0023015) #22	Katnb1 (MGP_PahariEiJ_G0023014) #23	Drc7 (MGP_PahariEiJ_G0023013) #24	Adgrg3 (MGP_PahariEiJ_G0023012) #25	Adgrg1 (MGP_PahariEiJ_G0023011) #26	Adgrg5 (MGP_PahariEiJ_G0023010) #27	Ccdc102a (MGP_PahariEiJ_G0023009) #28	Dok4 (MGP_PahariEiJ_G0023008) #29	MGP_PahariEiJ_G0023007 #30	Coq9 (MGP_PahariEiJ_G0023006) #31	Ciapin1 (MGP_PahariEiJ_G0023005) #32	Ccl17 (MGP_PahariEiJ_G0023004) #33	Cx3cl1 (MGP_PahariEiJ_G0023003) #35	Ccl22 (MGP_PahariEiJ_G0023002) #36	MGP_PahariEiJ_G0023001	Arl2bp (MGP_PahariEiJ_G0023000)
Rat	MODERN SPECIES	10	Slc38a7 (ENSRNOG00000012007)	Cnot1 (ENSRNOG00000012271) #7	ENSRNOG00000069069	Setd6 (ENSRNOG00000012447) #8	Ndrg4 (ENSRNOG00000012482) #9	Gins3 (ENSRNOG00000011863) #10	Prss54 (ENSRNOG00000023092) #11	Ccdc113 (ENSRNOG00000051510) #12	Csnk2a2 (ENSRNOG00000011933) #14	Cfap20 (ENSRNOG00000042179) #15	Mmp15 (ENSRNOG00000012622) #16	Usb1 (ENSRNOG00000013216) #17	Zfp319 (ENSRNOG00000062825)	Tepp (ENSRNOG00000013465) #18	Cngb1 (ENSRNOG00000031773) #20	Kifc3 (ENSRNOG00000014087) #22	Katnb1 (ENSRNOG00000014626) #23	Drc7 (ENSRNOG00000025860) #24	Adgrg3 (ENSRNOG00000014896) #25	Adgrg1 (ENSRNOG00000014963) #26	Adgrg5 (ENSRNOG00000039891) #27	Ccdc102a (ENSRNOG00000025843) #28	Dok4 (ENSRNOG00000015679) #29	Polr2c (ENSRNOG00000015720) #30	Coq9 (ENSRNOG00000016190) #31	Ciapin1 (ENSRNOG00000016234) #32	Ccl17 (ENSRNOG00000016278) #33	Cx3cl1 (ENSRNOG00000016326) #35	Pllp (ENSRNOG00000016558)	Arl2bp (ENSRNOG00000016991)	Rspry1 (ENSRNOG00000060931)
Upper Galilee mountains blind mole rat	MODERN SPECIES	901						Prss54 (ENSNGAG00000011258) #11	Ccdc113 (ENSNGAG00000003548) #12	Csnk2a2 (ENSNGAG00000021802) #14	Cfap20 (ENSNGAG00000000909) #15	Mmp15 (ENSNGAG00000011628) #16	Usb1 (ENSNGAG00000009703) #17	Zfp319 (ENSNGAG00000022587)	Tepp (ENSNGAG00000020594) #18	ENSNGAG00000021969	Cngb1 (ENSNGAG00000023187) #20	Kifc3 (ENSNGAG00000020050) #22	Katnb1 (ENSNGAG00000018107) #23	Drc7 (ENSNGAG00000009567) #24	Adgrg3 (ENSNGAG00000022730) #25	Adgrg1 (ENSNGAG00000020459) #26	Adgrg5 (ENSNGAG00000014077) #27	Ccdc102a (ENSNGAG00000022414) #28	Dok4 (ENSNGAG00000023034) #29	ENSNGAG00000012249 #30	Coq9 (ENSNGAG00000022657) #31	Ciapin1 (ENSNGAG00000020095) #32	Ccl17 (ENSNGAG00000011684) #33	Cx3cl1 (ENSNGAG00000013151) #35	Ccl22 (ENSNGAG00000017470) #36	Pllp (ENSNGAG00000004397)	ENSNGAG00000022116
Lesser Egyptian jerboa	MODERN SPECIES	102	Got2 (ENSJJAG00000020469)	ENSJJAG00000022746	Slc38a7 (ENSJJAG00000021200)	Cnot1 (ENSJJAG00000000633) #7	Setd6 (ENSJJAG00000021134) #8	Ndrg4 (ENSJJAG00000016427) #9	Gins3 (ENSJJAG00000012705) #10	Prss54 (ENSJJAG00000015278) #11	Ccdc113 (ENSJJAG00000020234) #12	Mmp15 (ENSJJAG00000013467) #16	Usb1 (ENSJJAG00000021859) #17	Zfp319 (ENSJJAG00000000816)	ENSJJAG00000013610 #18	ENSJJAG00000021723	Cngb1 (ENSJJAG00000014030) #20	Kifc3 (ENSJJAG00000010757) #22	Katnb1 (ENSJJAG00000017627) #23	Adgrg3 (ENSJJAG00000000571) #25	Adgrg1 (ENSJJAG00000014381) #26	Adgrg5 (ENSJJAG00000021977) #27	Ccdc102a (ENSJJAG00000021186) #28	Meak7 (ENSJJAG00000010140)	ENSJJAG00000013639	Zp3r (ENSJJAG00000021444)	C4bp (ENSJJAG00000020143)	Pfkfb2 (ENSJJAG00000022863)	Yod1 (ENSJJAG00000002881)	AA986860 (ENSJJAG00000013213)	Fcamr (ENSJJAG00000016798)	Pigr (ENSJJAG00000020501)	Il24 (ENSJJAG00000019483)
Kangaroo rat	MODERN SPECIES	337	ENSDORG00000002101 #7	Setd6 (ENSDORG00000002098) #8	Ndrg4 (ENSDORG00000002097) #9	Gins3 (ENSDORG00000023548) #10	Prss54 (ENSDORG00000008712) #11	Ccdc113 (ENSDORG00000008710) #12	Csnk2a2 (ENSDORG00000001893) #14	Cfap20 (ENSDORG00000027182) #15	Mmp15 (ENSDORG00000001890) #16	Usb1 (ENSDORG00000001888) #17	Zfp319 (ENSDORG00000027637)	Tepp (ENSDORG00000001883) #18	ENSDORG00000025807	ENSDORG00000001874	ENSDORG00000023432	Kifc3 (ENSDORG00000026306) #22	Katnb1 (ENSDORG00000013099) #23	Drc7 (ENSDORG00000013093) #24	Adgrg3 (ENSDORG00000013090) #25	ENSDORG00000013087 #26
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.k.b
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.k.b
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.k.b
Long-tailed chinchilla	MODERN SPECIES	140	GOT2 (ENSCLAG00000007296)	SLC38A7 (ENSCLAG00000006853)	CNOT1 (ENSCLAG00000006289) #7	SETD6 (ENSCLAG00000004801) #8	NDRG4 (ENSCLAG00000004372) #9	GINS3 (ENSCLAG00000007546) #10	PRSS54 (ENSCLAG00000007356) #11	CCDC113 (ENSCLAG00000006984) #12	CSNK2A2 (ENSCLAG00000005997) #14	CFAP20 (ENSCLAG00000011438) #15	MMP15 (ENSCLAG00000007587) #16	USB1 (ENSCLAG00000007363) #17	ZNF319 (ENSCLAG00000006953)	TEPP (ENSCLAG00000006774) #18	ENSCLAG00000014685	KIFC3 (ENSCLAG00000008541) #22	KATNB1 (ENSCLAG00000014246) #23	DRC7 (ENSCLAG00000013794) #24	ADGRG3 (ENSCLAG00000012984) #25	ADGRG1 (ENSCLAG00000010870) #26	ADGRG5 (ENSCLAG00000010205) #27	CCDC102A (ENSCLAG00000008368) #28	DOK4 (ENSCLAG00000014282) #29	POLR2C (ENSCLAG00000013676) #30	COQ9 (ENSCLAG00000017341) #31	CIAPIN1 (ENSCLAG00000014217) #32	CCL17 (ENSCLAG00000011304) #33	CX3CL1 (ENSCLAG00000006390) #35	CCL22 (ENSCLAG00000006350) #36	PLLP (ENSCLAG00000005351)	ENSCLAG00000004890
Degu	MODERN SPECIES	52	ENSODEG00000016070	SETD6 (ENSODEG00000016648) #8	NDRG4 (ENSODEG00000016199) #9	ENSODEG00000017143 #10	ENSODEG00000020438 ##30	PRSS54 (ENSODEG00000016478) #11	CCDC113 (ENSODEG00000016688) #12	CSNK2A2 (ENSODEG00000016472) #14	ENSODEG00000016796 #15	MMP15 (ENSODEG00000016241) #16	USB1 (ENSODEG00000016214) #17	ZNF319 (ENSODEG00000020561)	TEPP (ENSODEG00000016872) #18	ENSODEG00000016499	ENSODEG00000016652	KIFC3 (ENSODEG00000016442) #22	ENSODEG00000016661	KATNB1 (ENSODEG00000016563) #23	DRC7 (ENSODEG00000016485) #24	ADGRG3 (ENSODEG00000016660) #25	ADGRG1 (ENSODEG00000016469) #26	ADGRG5 (ENSODEG00000016829) #27	CCDC102A (ENSODEG00000016989) #28	DOK4 (ENSODEG00000016502) #29	POLR2C (ENSODEG00000016934) #30	COQ9 (ENSODEG00000016759) #31	CIAPIN1 (ENSODEG00000016505) #32	CCL17 (ENSODEG00000016715) #33	CX3CL1 (ENSODEG00000016594) #35	CCL22 (ENSODEG00000016843) #36	PLLP (ENSODEG00000016891)
Guinea pig	MODERN SPECIES	22	SLC38A7 (ENSCPOG00000009158)	CNOT1 (ENSCPOG00000013026) #7	SETD6 (ENSCPOG00000023334) #8	NDRG4 (ENSCPOG00000012449) #9	GINS3 (ENSCPOG00000035821) #10	PRSS54 (ENSCPOG00000002647) #11	CCDC113 (ENSCPOG00000002643) #12	CSNK2A2 (ENSCPOG00000008436) #14	CFAP20 (ENSCPOG00000008426) #15	MMP15 (ENSCPOG00000014329) #16	USB1 (ENSCPOG00000014325) #17	ZNF319 (ENSCPOG00000030357)	TEPP (ENSCPOG00000014315) #18	ENSCPOG00000038901	ENSCPOG00000014299	KIFC3 (ENSCPOG00000006673) #22	KATNB1 (ENSCPOG00000006661) #23	DRC7 (ENSCPOG00000023534) #24	ADGRG3 (ENSCPOG00000027440) #25	ADGRG1 (ENSCPOG00000007121) #26	ADGRG5 (ENSCPOG00000020946) #27	CCDC102A (ENSCPOG00000025486) #28	DOK4 (ENSCPOG00000035700) #29	POLR2C (ENSCPOG00000004554) #30	COQ9 (ENSCPOG00000004549) #31	CIAPIN1 (ENSCPOG00000027225) #32	CCL17 (ENSCPOG00000006326) #33	CX3CL1 (ENSCPOG00000034448) #35	CCL22 (ENSCPOG00000033528) #36	PLLP (ENSCPOG00000032449)	ENSCPOG00000011406
Naked mole-rat female	MODERN SPECIES	26	NDRG4 (ENSHGLG00000012553) #9	GINS3 (ENSHGLG00000041082) #10	ENSHGLG00000011450	ENSHGLG00000011914	ENSHGLG00000033990	ENSHGLG00000044368	PRSS54 (ENSHGLG00000012351) #11	CCDC113 (ENSHGLG00000016049) #12	CSNK2A2 (ENSHGLG00000014843) #14	CFAP20 (ENSHGLG00000011587) #15	MMP15 (ENSHGLG00000014300) #16	USB1 (ENSHGLG00000037991) #17	TEPP (ENSHGLG00000012890) #18	ENSHGLG00000016148	ENSHGLG00000010847	KIFC3 (ENSHGLG00000010429) #22	KATNB1 (ENSHGLG00000013445) #23	DRC7 (ENSHGLG00000016692) #24	ADGRG3 (ENSHGLG00000010674) #25	ADGRG1 (ENSHGLG00000013378) #26	ADGRG5 (ENSHGLG00000011843) #27	CCDC102A (ENSHGLG00000012276) #28	DOK4 (ENSHGLG00000013069) #29	POLR2C (ENSHGLG00000013465) #30	COQ9 (ENSHGLG00000011366) #31	ENSHGLG00000011949 #32	CCL17 (ENSHGLG00000012764) #33	CX3CL1 (ENSHGLG00000010666) #35	CCL22 (ENSHGLG00000036848) #36	ENSHGLG00000011615	RSPRY1 (ENSHGLG00000012748)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00960000186694	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.b
Marmotini	ANCESTRAL SPECIES	17	ENSGT00950000183082.a.pb	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.m #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.b
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00950000183082.a.pb	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554.hb.a #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.m #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.b
Arctic ground squirrel	MODERN SPECIES	157		SLC38A7 (ENSUPAG00010011616)	CNOT1 (ENSUPAG00010011626) #7	SETD6 (ENSUPAG00010011793) #8	NDRG4 (ENSUPAG00010011813) #9	GINS3 (ENSUPAG00010011871) #10	PRSS54 (ENSUPAG00010011878) #11	CCDC113 (ENSUPAG00010011899) #12	CSNK2A2 (ENSUPAG00010011923) #14	CFAP20 (ENSUPAG00010011959) #15	MMP15 (ENSUPAG00010011967) #16	USB1 (ENSUPAG00010011975) #17	ZNF319 (ENSUPAG00010012001)	TEPP (ENSUPAG00010012012) #18	ENSUPAG00010012097	KIFC3 (ENSUPAG00010012144) #22	KATNB1 (ENSUPAG00010012233) #23	DRC7 (ENSUPAG00010012271) #24	ADGRG3 (ENSUPAG00010012299) #25	ADGRG1 (ENSUPAG00010012319) #26	ADGRG5 (ENSUPAG00010012679) #27	CCDC102A (ENSUPAG00010012704) #28	DOK4 (ENSUPAG00010012714) #29	POLR2C (ENSUPAG00010012727) #30	COQ9 (ENSUPAG00010012739) #31	CIAPIN1 (ENSUPAG00010012765) #32	CCL17 (ENSUPAG00010012771) #33	CX3CL1 (ENSUPAG00010012777) #35	CCL22 (ENSUPAG00010012782) #36	PLLP (ENSUPAG00010012788)	ENSUPAG00010012796
Squirrel	MODERN SPECIES	75	ENSSTOG00000029905	SLC38A7 (ENSSTOG00000005590)	CNOT1 (ENSSTOG00000005490) #7	SETD6 (ENSSTOG00000005479) #8	NDRG4 (ENSSTOG00000005454) #9	GINS3 (ENSSTOG00000005709) #10	PRSS54 (ENSSTOG00000003562) #11	CCDC113 (ENSSTOG00000028076) #12	CSNK2A2 (ENSSTOG00000003538) #14	CFAP20 (ENSSTOG00000003530) #15	MMP15 (ENSSTOG00000002405) #16	USB1 (ENSSTOG00000007548) #17	ZNF319 (ENSSTOG00000019944)	Tepp (ENSSTOG00000002105) #18	ENSSTOG00000007496	KIFC3 (ENSSTOG00000007446) #22	KATNB1 (ENSSTOG00000025980) #23	DRC7 (ENSSTOG00000024967) #24	ADGRG3 (ENSSTOG00000004211) #25	ADGRG1 (ENSSTOG00000004173) #26	ADGRG5 (ENSSTOG00000013311) #27	CCDC102A (ENSSTOG00000007357) #28	DOK4 (ENSSTOG00000023553) #29	ENSSTOG00000015150 #30	COQ9 (ENSSTOG00000015145) #31	ENSSTOG00000015141 #32	CCL17 (ENSSTOG00000015140) #33	CX3CL1 (ENSSTOG00000015132) #35	CCL22 (ENSSTOG00000010260) #36	PLLP (ENSSTOG00000010257)	ENSSTOG00000010254
Alpin marmot	MODERN SPECIES	23	SLC38A7 (ENSMMMG00000009115)	ENSMMMG00000009163	CNOT1 (ENSMMMG00000009174) #7	SETD6 (ENSMMMG00000009470) #8	NDRG4 (ENSMMMG00000009515) #9	GINS3 (ENSMMMG00000009647) #10	PRSS54 (ENSMMMG00000009656) #11	CCDC113 (ENSMMMG00000009667) #12	CSNK2A2 (ENSMMMG00000009681) #14	CFAP20 (ENSMMMG00000009735) #15	MMP15 (ENSMMMG00000009783) #16	USB1 (ENSMMMG00000009833) #17	ZNF319 (ENSMMMG00000009847)	TEPP (ENSMMMG00000009853) #18	ENSMMMG00000009900	KIFC3 (ENSMMMG00000009974) #22	KATNB1 (ENSMMMG00000010088) #23	DRC7 (ENSMMMG00000010135) #24	ADGRG3 (ENSMMMG00000010166) #25	ENSMMMG00000010194	ADGRG5 (ENSMMMG00000010204) #27	CCDC102A (ENSMMMG00000010251) #28	DOK4 (ENSMMMG00000010285) #29	POLR2C (ENSMMMG00000010317) #30	ENSMMMG00000010330 #31	ENSMMMG00000010342 #32	CCL17 (ENSMMMG00000010360) #33	ENSMMMG00000010372	CCL22 (ENSMMMG00000010378) #36	PLLP (ENSMMMG00000010387)	ENSMMMG00000010394
Eurasian red squirrel	MODERN SPECIES	8	SLC38A7 (ENSSVLG00005017988)	CNOT1 (ENSSVLG00005018264) #7	SETD6 (ENSSVLG00005018395) #8	NDRG4 (ENSSVLG00005018581) #9	GINS3 (ENSSVLG00005018840) #10	PRSS54 (ENSSVLG00005018883) #11	CCDC113 (ENSSVLG00005018943) #12	ENSSVLG00005019189	ENSSVLG00005019222 #14	ENSSVLG00005019291 #15	MMP15 (ENSSVLG00005019370) #16	USB1 (ENSSVLG00005019676) #17	ZNF319 (ENSSVLG00005019911)	TEPP (ENSSVLG00005019932) #18	CNGB1 (ENSSVLG00005020077) #20	KIFC3 (ENSSVLG00005020657) #22	KATNB1 (ENSSVLG00005020991) #23	DRC7 (ENSSVLG00005021058) #24	ADGRG3 (ENSSVLG00005021393) #25	ADGRG1 (ENSSVLG00005021564) #26	CCDC102A (ENSSVLG00005022079) #28	DOK4 (ENSSVLG00005022133) #29	ENSSVLG00005022201 #30	COQ9 (ENSSVLG00005022306) #31	CIAPIN1 (ENSSVLG00005022498) #32	CCL17 (ENSSVLG00005022562) #33	CX3CL1 (ENSSVLG00005022593) #35	CCL22 (ENSSVLG00005022629) #36	ENSSVLG00005022670	PLLP (ENSSVLG00005022711)	ENSSVLG00005022772
Lagomorpha	ANCESTRAL SPECIES	48	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359.d #27	ENSGT00940000161359.c #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000166352	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Rabbit	MODERN SPECIES	16	GOT2 (ENSOCUG00000003871)	SLC38A7 (ENSOCUG00000003868)	CNOT1 (ENSOCUG00000006911) #7	SETD6 (ENSOCUG00000006903) #8	NDRG4 (ENSOCUG00000022245) #9	GINS3 (ENSOCUG00000006054) #10	PRSS54 (ENSOCUG00000027370) #11	CCDC113 (ENSOCUG00000008832) #12	CSNK2A2 (ENSOCUG00000005074) #14	CFAP20 (ENSOCUG00000014026) #15	MMP15 (ENSOCUG00000014015) #16	ZNF319 (ENSOCUG00000011058)	TEPP (ENSOCUG00000011053) #18	ENSOCUG00000037145	ENSOCUG00000010540	KIFC3 (ENSOCUG00000012069) #22	KATNB1 (ENSOCUG00000026139) #23	DRC7 (ENSOCUG00000016661) #24	ENSOCUG00000016641 #25	ADGRG1 (ENSOCUG00000007622) #26	ENSOCUG00000032201 #27	ENSOCUG00000027621 #27	DOK4 (ENSOCUG00000026040) #29	POLR2C (ENSOCUG00000014984) #30	ENSOCUG00000033612	ENSOCUG00000014974 #31	CIAPIN1 (ENSOCUG00000007485) #32	ENSOCUG00000026533	CX3CL1 (ENSOCUG00000007482) #35	CCL22 (ENSOCUG00000015478) #36	PLLP (ENSOCUG00000007353)
Pika	MODERN SPECIES	10247																KIFC3 (ENSOPRG00000008261) #22	KATNB1 (ENSOPRG00000008235) #23
Tree shrew	MODERN SPECIES	5268														ENSTBEG00000000411	ENSTBEG00000000387 #21	KIFC3 (ENSTBEG00000000356) #22	KATNB1 (ENSTBEG00000000329) #23	ENSTBEG00000000300 #24	ADGRG3 (ENSTBEG00000000258) #25	ENSTBEG00000000249 #26
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Suina	ANCESTRAL SPECIES	2	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Pig	MODERN SPECIES	14	SLC38A7 (ENSSSCG00000040881)	CNOT1 (ENSSSCG00000002799) #7	SETD6 (ENSSSCG00000026505) #8	NDRG4 (ENSSSCG00000021911) #9	GINS3 (ENSSSCG00000002802) #10	PRSS54 (ENSSSCG00000028587) #11	CCDC113 (ENSSSCG00000002803) #12	CSNK2A2 (ENSSSCG00000002804) #14	CFAP20 (ENSSSCG00000002805) #15	MMP15 (ENSSSCG00000002806) #16	USB1 (ENSSSCG00000002807) #17	ZNF319 (ENSSSCG00000002808)	TEPP (ENSSSCG00000002809) #18	ENSSSCG00000063486	ENSSSCG00000002811	KIFC3 (ENSSSCG00000002812) #22	KATNB1 (ENSSSCG00000002813) #23	DRC7 (ENSSSCG00000002817) #24	ADGRG3 (ENSSSCG00000002814) #25	ADGRG1 (ENSSSCG00000002815) #26	ADGRG5 (ENSSSCG00000025503) #27	CCDC102A (ENSSSCG00000028723) #28	DOK4 (ENSSSCG00000029165) #29	POLR2C (ENSSSCG00000025454) #30	COQ9 (ENSSSCG00000025284) #31	CIAPIN1 (ENSSSCG00000029519) #32	CCL17 (ENSSSCG00000023852) #33	CX3CL1 (ENSSSCG00000024759) #35	CCL22 (ENSSSCG00000056251) #36	PLLP (ENSSSCG00000002818)	ENSSSCG00000002819
Chacoan peccary	MODERN SPECIES	106	GOT2 (ENSCWAG00000018278)	SLC38A7 (ENSCWAG00000018214)	CNOT1 (ENSCWAG00000017878) #7	SETD6 (ENSCWAG00000017806) #8	NDRG4 (ENSCWAG00000017544) #9	GINS3 (ENSCWAG00000017517) #10	ENSCWAG00000017470 #11	CCDC113 (ENSCWAG00000017246) #12	CSNK2A2 (ENSCWAG00000017172) #14	CFAP20 (ENSCWAG00000017133) #15	MMP15 (ENSCWAG00000017098) #16	USB1 (ENSCWAG00000017031) #17	ZNF319 (ENSCWAG00000017017)	TEPP (ENSCWAG00000016971) #18	CNGB1 (ENSCWAG00000016783) #20	KIFC3 (ENSCWAG00000016304) #22	KATNB1 (ENSCWAG00000016134) #23	DRC7 (ENSCWAG00000015885) #24	ADGRG3 (ENSCWAG00000015754) #25	ADGRG1 (ENSCWAG00000015367) #26	ADGRG5 (ENSCWAG00000015254) #27	CCDC102A (ENSCWAG00000015210) #28	DOK4 (ENSCWAG00000015144) #29	POLR2C (ENSCWAG00000015106) #30	COQ9 (ENSCWAG00000014914) #31	CIAPIN1 (ENSCWAG00000014749) #32	CX3CL1 (ENSCWAG00000014612) #35	CCL22 (ENSCWAG00000014555) #36	PLLP (ENSCWAG00000014487)	ARL2BP (ENSCWAG00000014396)	RSPRY1 (ENSCWAG00000014344)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00570000079722	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00960000189031	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00390000002684 #21	ENSGT00570000079722	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00960000189031	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00960000189031	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00390000004599.d	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Narwhal	MODERN SPECIES	296	GOT2 (ENSMMNG00015005652)	SLC38A7 (ENSMMNG00015005696)	CNOT1 (ENSMMNG00015005778) #7	SETD6 (ENSMMNG00015005864) #8	NDRG4 (ENSMMNG00015005938) #9	GINS3 (ENSMMNG00015006063) #10	ENSMMNG00015006086 #11	CCDC113 (ENSMMNG00015006096) #12	CSNK2A2 (ENSMMNG00015006120) #14	CFAP20 (ENSMMNG00015006150) #15	MMP15 (ENSMMNG00015006168) #16	USB1 (ENSMMNG00015006199) #17	ZNF319 (ENSMMNG00015006224)	TEPP (ENSMMNG00015006245) #18	ENSMMNG00015006536	KIFC3 (ENSMMNG00015007057) #22	KATNB1 (ENSMMNG00015007244) #23	DRC7 (ENSMMNG00015007304) #24	ADGRG3 (ENSMMNG00015007344) #25	ADGRG1 (ENSMMNG00015007388) #26	ENSMMNG00015007450	ADGRG5 (ENSMMNG00015007485) #27	CCDC102A (ENSMMNG00015007532) #28	DOK4 (ENSMMNG00015007565) #29	POLR2C (ENSMMNG00015007596) #30	COQ9 (ENSMMNG00015007649) #31	CIAPIN1 (ENSMMNG00015007721) #32	CCL17 (ENSMMNG00015007741) #33	CX3CL1 (ENSMMNG00015007755) #35	CCL22 (ENSMMNG00015007764) #36	ENSMMNG00015007767
Beluga whale	MODERN SPECIES	3	GOT2 (ENSDLEG00000020846)	ENSDLEG00000020843	CNOT1 (ENSDLEG00000017671) #7	SETD6 (ENSDLEG00000017026) #8	NDRG4 (ENSDLEG00000016042) #9	GINS3 (ENSDLEG00000015953) #10	PRSS54 (ENSDLEG00000015935) #11	CCDC113 (ENSDLEG00000015914) #12	CSNK2A2 (ENSDLEG00000015891) #14	CFAP20 (ENSDLEG00000015870) #15	MMP15 (ENSDLEG00000015773) #16	USB1 (ENSDLEG00000015715) #17	ZNF319 (ENSDLEG00000015704)	TEPP (ENSDLEG00000015670) #18	ENSDLEG00000014085	KIFC3 (ENSDLEG00000013857) #22	ENSDLEG00000013830 #23	ENSDLEG00000013822 #23	DRC7 (ENSDLEG00000013751) #24	ENSDLEG00000013595 #25	ENSDLEG00000013364 #25	ADGRG1 (ENSDLEG00000013293) #26	ENSDLEG00000013250	ADGRG5 (ENSDLEG00000013245) #27	CCDC102A (ENSDLEG00000013217) #28	DOK4 (ENSDLEG00000013204) #29	POLR2C (ENSDLEG00000013187) #30	COQ9 (ENSDLEG00000013161) #31	CIAPIN1 (ENSDLEG00000013140) #32	ENSDLEG00000013133	CX3CL1 (ENSDLEG00000013119) #35
Vaquita	MODERN SPECIES	10	GOT2 (ENSPSNG00000013169)	SLC38A7 (ENSPSNG00000013079)	CNOT1 (ENSPSNG00000022274) #7	SETD6 (ENSPSNG00000022258) #8	NDRG4 (ENSPSNG00000022228) #9	GINS3 (ENSPSNG00000022183) #10	ENSPSNG00000022173 #11	CCDC113 (ENSPSNG00000022158) #12	CSNK2A2 (ENSPSNG00000022145) #14	CFAP20 (ENSPSNG00000022135) #15	MMP15 (ENSPSNG00000022123) #16	USB1 (ENSPSNG00000022103) #17	TEPP (ENSPSNG00000022075) #18	ZNF319 (ENSPSNG00000022059)	ENSPSNG00000022031	KIFC3 (ENSPSNG00000021762) #22	KATNB1 (ENSPSNG00000021659) #23	DRC7 (ENSPSNG00000021583) #24	ADGRG3 (ENSPSNG00000021493) #25	ENSPSNG00000021426	ADGRG5 (ENSPSNG00000021356) #27	CCDC102A (ENSPSNG00000021313) #28	DOK4 (ENSPSNG00000021291) #29	POLR2C (ENSPSNG00000021268) #30	COQ9 (ENSPSNG00000021226) #31	CIAPIN1 (ENSPSNG00000021155) #32	CCL17 (ENSPSNG00000021115) #33	CX3CL1 (ENSPSNG00000021092) #35	CCL22 (ENSPSNG00000021079) #36	PLLP (ENSPSNG00000021042)	ARL2BP (ENSPSNG00000020992)
Dolphin	MODERN SPECIES	3188																KIFC3 (ENSTTRG00000010068) #22	KATNB1 (ENSTTRG00000010067) #23	DRC7 (ENSTTRG00000010066) #24	ADGRG3 (ENSTTRG00000010065) #25	ADGRG1 (ENSTTRG00000010064) #26	ADGRG5 (ENSTTRG00000010063) #27	CCDC102A (ENSTTRG00000010062) #28	DOK4 (ENSTTRG00000010061) #29	POLR2C (ENSTTRG00000010060) #30	COQ9 (ENSTTRG00000010059) #31	CIAPIN1 (ENSTTRG00000010058) #32	ENSTTRG00000010056	CX3CL1 (ENSTTRG00000010048) #35	CCL22 (ENSTTRG00000010047) #36
Sperm whale	MODERN SPECIES	8	SLC38A7 (ENSPCTG00005021492)	CNOT1 (ENSPCTG00005021083) #7	SETD6 (ENSPCTG00005020969) #8	NDRG4 (ENSPCTG00005020325) #9	GINS3 (ENSPCTG00005020207) #10	ENSPCTG00005020160 #11	CCDC113 (ENSPCTG00005019934) #12	CSNK2A2 (ENSPCTG00005019830) #14	CFAP20 (ENSPCTG00005019778) #15	MMP15 (ENSPCTG00005019749) #16	USB1 (ENSPCTG00005019589) #17	ZNF319 (ENSPCTG00005019566)	TEPP (ENSPCTG00005019479) #18	ENSPCTG00005019357	CNGB1 (ENSPCTG00005019186) #20	KIFC3 (ENSPCTG00005018862) #22	KATNB1 (ENSPCTG00005018786) #23	DRC7 (ENSPCTG00005018733) #24	ADGRG1 (ENSPCTG00005018374) #26	ENSPCTG00005018252	ADGRG5 (ENSPCTG00005018050) #27	CCDC102A (ENSPCTG00005017954) #28	CCL22 (ENSPCTG00005017906) #36	CX3CL1 (ENSPCTG00005017707) #35	CCL17 (ENSPCTG00005017652) #33	PLLP (ENSPCTG00005017594)	ARL2BP (ENSPCTG00005017515)	RSPRY1 (ENSPCTG00005017317)	FAM192A (ENSPCTG00005017202)	CPNE2 (ENSPCTG00005017142)	NLRC5 (ENSPCTG00005016026)
Blue whale	MODERN SPECIES	10	CNOT1 (ENSBMSG00010020670) #7	SETD6 (ENSBMSG00010020609) #8	NDRG4 (ENSBMSG00010020516) #9	GINS3 (ENSBMSG00010020462) #10	ENSBMSG00010020438	PRSS54 (ENSBMSG00010020412) #11	CCDC113 (ENSBMSG00010020393) #12	CSNK2A2 (ENSBMSG00010020354) #14	CFAP20 (ENSBMSG00010020328) #15	MMP15 (ENSBMSG00010020294) #16	USB1 (ENSBMSG00010020222) #17	ZNF319 (ENSBMSG00010020200)	ENSBMSG00010020175 #18	ENSBMSG00010020140	CNGB1 (ENSBMSG00010020098) #20	KIFC3 (ENSBMSG00010019894) #22	KATNB1 (ENSBMSG00010019828) #23	DRC7 (ENSBMSG00010019768) #24	ADGRG3 (ENSBMSG00010019708) #25	ADGRG1 (ENSBMSG00010019597) #26	ENSBMSG00010019556	ADGRG5 (ENSBMSG00010019509) #27	CCDC102A (ENSBMSG00010019473) #28	DOK4 (ENSBMSG00010019444) #29	POLR2C (ENSBMSG00010019417) #30	COQ9 (ENSBMSG00010019327) #31	CIAPIN1 (ENSBMSG00010019286) #32	CCL17 (ENSBMSG00010019265) #33	CX3CL1 (ENSBMSG00010019251) #35	CCL22 (ENSBMSG00010019229) #36	ENSBMSG00010019212
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Yarkand deer	MODERN SPECIES	27	SLC38A7 (ENSCHYG00000018490)	CNOT1 (ENSCHYG00000017540) #7	SETD6 (ENSCHYG00000017261) #8	NDRG4 (ENSCHYG00000016352) #9	GINS3 (ENSCHYG00000016256) #10	ENSCHYG00000016174 #11	CCDC113 (ENSCHYG00000015946) #12	CSNK2A2 (ENSCHYG00000015792) #14	CFAP20 (ENSCHYG00000015699) #15	MMP15 (ENSCHYG00000015474) #16	USB1 (ENSCHYG00000015143) #17	ZNF319 (ENSCHYG00000015065)	TEPP (ENSCHYG00000014959) #18	ENSCHYG00000014815	ENSCHYG00000014612	KIFC3 (ENSCHYG00000013726) #22	KATNB1 (ENSCHYG00000013566) #23	DRC7 (ENSCHYG00000013142) #24	ADGRG3 (ENSCHYG00000013051) #25	ADGRG1 (ENSCHYG00000012862) #26	ADGRG5 (ENSCHYG00000012755) #27	CCDC102A (ENSCHYG00000012670) #28	DOK4 (ENSCHYG00000012582) #29	POLR2C (ENSCHYG00000012515) #30	ENSCHYG00000012462	COQ9 (ENSCHYG00000012304) #31	CIAPIN1 (ENSCHYG00000012085) #32	ENSCHYG00000012042	ENSCHYG00000012010 #35	CCL22 (ENSCHYG00000011973) #36	ENSCHYG00000011866
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Caprinae	ANCESTRAL SPECIES	4	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Goat	MODERN SPECIES	9	SLC38A7 (ENSCHIG00000016964)	CNOT1 (ENSCHIG00000010452) #7	SETD6 (ENSCHIG00000008456) #8	NDRG4 (ENSCHIG00000021788) #9	GINS3 (ENSCHIG00000021374) #10	ENSCHIG00000014107 #11	CCDC113 (ENSCHIG00000014723) #12	CSNK2A2 (ENSCHIG00000020806) #14	CFAP20 (ENSCHIG00000025631) #15	MMP15 (ENSCHIG00000002832) #16	USB1 (ENSCHIG00000024290) #17	ZNF319 (ENSCHIG00000003371)	TEPP (ENSCHIG00000008699) #18	ENSCHIG00000016478	ENSCHIG00000016930	KIFC3 (ENSCHIG00000024161) #22	KATNB1 (ENSCHIG00000026579) #23	DRC7 (ENSCHIG00000024756) #24	ADGRG3 (ENSCHIG00000010854) #25	ADGRG1 (ENSCHIG00000020062) #26	ADGRG5 (ENSCHIG00000026307) #27	CCDC102A (ENSCHIG00000024960) #28	COQ9 (ENSCHIG00000016857) #31	CIAPIN1 (ENSCHIG00000020675) #32	CCL17 (ENSCHIG00000011175) #33	ENSCHIG00000024179 #35	CCL22 (ENSCHIG00000022701) #36	ENSCHIG00000024963	PLLP (ENSCHIG00000008022)	ENSCHIG00000012298	RSPRY1 (ENSCHIG00000024302)
Rambouillet Sheep	MODERN SPECIES	5	GOT2 (ENSOARG00020013006)	SLC38A7 (ENSOARG00020012797)	CNOT1 (ENSOARG00020012509) #7	SETD6 (ENSOARG00020012450) #8	NDRG4 (ENSOARG00020009033) #9	GINS3 (ENSOARG00020008931) #10	ENSOARG00020008864 #11	CCDC113 (ENSOARG00020008747) #12	CSNK2A2 (ENSOARG00020008664) #14	CFAP20 (ENSOARG00020008641) #15	MMP15 (ENSOARG00020008563) #16	USB1 (ENSOARG00020008448) #17	ZNF319 (ENSOARG00020008426)	TEPP (ENSOARG00020008375) #18	ENSOARG00020005250	KIFC3 (ENSOARG00020004375) #22	KATNB1 (ENSOARG00020004295) #23	DRC7 (ENSOARG00020004090) #24	ADGRG3 (ENSOARG00020004008) #25	ADGRG1 (ENSOARG00020003759) #26	ADGRG5 (ENSOARG00020003697) #27	CCDC102A (ENSOARG00020003655) #28	DOK4 (ENSOARG00020003614) #29	POLR2C (ENSOARG00020003589) #30	COQ9 (ENSOARG00020003481) #31	CIAPIN1 (ENSOARG00020003371) #32	CCL17 (ENSOARG00020003332) #33	ENSOARG00020003298	CCL22 (ENSOARG00020003275) #36	ENSOARG00020003223	PLLP (ENSOARG00020003179)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Bos	ANCESTRAL SPECIES	4	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Domestic yak	MODERN SPECIES	12	ENSBGRG00000011994	SLC38A7 (ENSBGRG00000012057)	CNOT1 (ENSBGRG00000012216) #7	SETD6 (ENSBGRG00000013064) #8	NDRG4 (ENSBGRG00000013280) #9	GINS3 (ENSBGRG00000014032) #10	PRSS54 (ENSBGRG00000014095) #11	CCDC113 (ENSBGRG00000014166) #12	CSNK2A2 (ENSBGRG00000014395) #14	CFAP20 (ENSBGRG00000014585) #15	MMP15 (ENSBGRG00000014725) #16	ENSBGRG00000014806 #17	ZNF319 (ENSBGRG00000015086)	TEPP (ENSBGRG00000015142) #18	CNGB1 (ENSBGRG00000015472) #20	KIFC3 (ENSBGRG00000015805) #22	KATNB1 (ENSBGRG00000016460) #23	DRC7 (ENSBGRG00000016618) #24	ADGRG3 (ENSBGRG00000017220) #25	ADGRG1 (ENSBGRG00000017288) #26	ADGRG5 (ENSBGRG00000017544) #27	CCDC102A (ENSBGRG00000017700) #28	DOK4 (ENSBGRG00000017888) #29	POLR2C (ENSBGRG00000018243) #30	COQ9 (ENSBGRG00000018353) #31	CIAPIN1 (ENSBGRG00000018538) #32	CCL17 (ENSBGRG00000018775) #33	CX3CL1 (ENSBGRG00000018812) #35	CCL22 (ENSBGRG00000018901) #36	ENSBGRG00000018962	PLLP (ENSBGRG00000019006)
Wild yak	MODERN SPECIES	1140	SLC38A7 (ENSBMUG00000002302)	CNOT1 (ENSBMUG00000002146) #7	SETD6 (ENSBMUG00000002024) #8	NDRG4 (ENSBMUG00000001926) #9	GINS3 (ENSBMUG00000001753) #10	ENSBMUG00000001721 #11	CCDC113 (ENSBMUG00000001710) #12	CSNK2A2 (ENSBMUG00000001654) #14	CFAP20 (ENSBMUG00000001635) #15	MMP15 (ENSBMUG00000001617) #16	USB1 (ENSBMUG00000001576) #17	ZNF319 (ENSBMUG00000001536)	TEPP (ENSBMUG00000001493) #18	ENSBMUG00000001398	ENSBMUG00000001368	KIFC3 (ENSBMUG00000001308) #22	KATNB1 (ENSBMUG00000001181) #23	DRC7 (ENSBMUG00000001135) #24	ADGRG3 (ENSBMUG00000001083) #25	ADGRG1 (ENSBMUG00000001058) #26	ADGRG5 (ENSBMUG00000001027) #27	CCDC102A (ENSBMUG00000000979) #28	DOK4 (ENSBMUG00000000922) #29	POLR2C (ENSBMUG00000000889) #30	COQ9 (ENSBMUG00000000875) #31	CIAPIN1 (ENSBMUG00000000830) #32	CCL17 (ENSBMUG00000000754) #33	CX3CL1 (ENSBMUG00000000739) #35	CCL22 (ENSBMUG00000000705) #36	ENSBMUG00000000691	PLLP (ENSBMUG00000000677)
Bos_b	ANCESTRAL SPECIES		ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Hybrid Bos Indicus	MODERN SPECIES	9	SLC38A7 (ENSBIXG00005019230)	CNOT1 (ENSBIXG00005005439) #7	SETD6 (ENSBIXG00005019038) #8	NDRG4 (ENSBIXG00005003090) #9	GINS3 (ENSBIXG00005003043) #10	PRSS54 (ENSBIXG00005007663) #11	CCDC113 (ENSBIXG00005006873) #12	CSNK2A2 (ENSBIXG00005007659) #14	CFAP20 (ENSBIXG00005003006) #15	MMP15 (ENSBIXG00005018526) #16	USB1 (ENSBIXG00005002993) #17	ZNF319 (ENSBIXG00005018465)	TEPP (ENSBIXG00005018441) #18	ENSBIXG00005018324	ENSBIXG00005018276	KIFC3 (ENSBIXG00005017884) #22	KATNB1 (ENSBIXG00005017560) #23	DRC7 (ENSBIXG00005017472) #24	ADGRG3 (ENSBIXG00005017407) #25	ADGRG1 (ENSBIXG00005002824) #26	ADGRG5 (ENSBIXG00005017264) #27	CCDC102A (ENSBIXG00005017222) #28	DOK4 (ENSBIXG00005017194) #29	POLR2C (ENSBIXG00005002788) #30	COQ9 (ENSBIXG00005017125) #31	CIAPIN1 (ENSBIXG00005006388) #32	CCL17 (ENSBIXG00005016945) #33	ENSBIXG00005016924 #35	CCL22 (ENSBIXG00005016912) #36	ENSBIXG00005006861	PLLP (ENSBIXG00005016883)
Cow	MODERN SPECIES	9	GOT2 (ENSBTAG00000007172)	SLC38A7 (ENSBTAG00000007170)	CNOT1 (ENSBTAG00000020782) #7	SETD6 (ENSBTAG00000020781) #8	NDRG4 (ENSBTAG00000003894) #9	GINS3 (ENSBTAG00000009363) #10	PRSS54 (ENSBTAG00000014147) #11	CCDC113 (ENSBTAG00000014144) #12	CSNK2A2 (ENSBTAG00000013784) #14	CFAP20 (ENSBTAG00000013874) #15	MMP15 (ENSBTAG00000012919) #16	USB1 (ENSBTAG00000015758) #17	ZNF319 (ENSBTAG00000045572)	TEPP (ENSBTAG00000012785) #18	CNGB1 (ENSBTAG00000005702) #20	KIFC3 (ENSBTAG00000007181) #22	KATNB1 (ENSBTAG00000001848) #23	DRC7 (ENSBTAG00000008005) #24	ADGRG3 (ENSBTAG00000006221) #25	ADGRG1 (ENSBTAG00000038141) #26	ADGRG5 (ENSBTAG00000005170) #27	CCDC102A (ENSBTAG00000000462) #28	DOK4 (ENSBTAG00000001857) #29	POLR2C (ENSBTAG00000001856) #30	COQ9 (ENSBTAG00000001855) #31	CIAPIN1 (ENSBTAG00000001854) #32	CCL17 (ENSBTAG00000001191) #33	CX3CL1 (ENSBTAG00000024869) #35	CCL22 (ENSBTAG00000017718) #36	HSBP1 (ENSBTAG00000024889)	PLLP (ENSBTAG00000011700)
American bison	MODERN SPECIES	3332	GOT2 (ENSBBBG00000009736)	SLC38A7 (ENSBBBG00000009730)	CNOT1 (ENSBBBG00000009711) #7	SETD6 (ENSBBBG00000009667) #8	NDRG4 (ENSBBBG00000009621) #9	GINS3 (ENSBBBG00000009512) #10	ENSBBBG00000009506 #11	CCDC113 (ENSBBBG00000001521) #12	CSNK2A2 (ENSBBBG00000009499) #14	CFAP20 (ENSBBBG00000009492) #15	MMP15 (ENSBBBG00000009486) #16	USB1 (ENSBBBG00000001519) #17	ZNF319 (ENSBBBG00000009474)	TEPP (ENSBBBG00000009471) #18	ENSBBBG00000009442	KIFC3 (ENSBBBG00000009403) #22	KATNB1 (ENSBBBG00000009389) #23	DRC7 (ENSBBBG00000009387) #24	ADGRG3 (ENSBBBG00000001481) #25	ADGRG1 (ENSBBBG00000009380) #26	ADGRG5 (ENSBBBG00000009373) #27	CCDC102A (ENSBBBG00000001477) #28	DOK4 (ENSBBBG00000009368) #29	POLR2C (ENSBBBG00000009366) #30	COQ9 (ENSBBBG00000009365) #31	CIAPIN1 (ENSBBBG00000009357) #32	CCL17 (ENSBBBG00000009355) #33	CX3CL1 (ENSBBBG00000009354) #35	CCL22 (ENSBBBG00000009353) #36	ENSBBBG00000009352	PLLP (ENSBBBG00000009350)
Siberian musk deer	MODERN SPECIES	125	SLC38A7 (ENSMMSG00000004061)	CNOT1 (ENSMMSG00000004096) #7	SETD6 (ENSMMSG00000004139) #8	NDRG4 (ENSMMSG00000004157) #9	GINS3 (ENSMMSG00000004215) #10	ENSMMSG00000004229 #11	CCDC113 (ENSMMSG00000004244) #12	ENSMMSG00000004269 #14	CFAP20 (ENSMMSG00000004297) #15	MMP15 (ENSMMSG00000004309) #16	USB1 (ENSMMSG00000004327) #17	ZNF319 (ENSMMSG00000004384)	TEPP (ENSMMSG00000004406) #18	ENSMMSG00000004444	ENSMMSG00000004485	KIFC3 (ENSMMSG00000004606) #22	KATNB1 (ENSMMSG00000000046) #23	DRC7 (ENSMMSG00000000164) #24	ADGRG3 (ENSMMSG00000000257) #25	ADGRG1 (ENSMMSG00000000285) #26	ADGRG5 (ENSMMSG00000000353) #27	CCDC102A (ENSMMSG00000000422) #28	DOK4 (ENSMMSG00000000459) #29	POLR2C (ENSMMSG00000000503) #30	COQ9 (ENSMMSG00000000534) #31	CIAPIN1 (ENSMMSG00000000608) #32	CCL17 (ENSMMSG00000000682) #33	CX3CL1 (ENSMMSG00000000720) #35	CCL22 (ENSMMSG00000000774) #36	PLLP (ENSMMSG00000000810)	ENSMMSG00000000860
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Arabian camel	MODERN SPECIES	35	CNOT1 (ENSCDRG00005006002) #7	SETD6 (ENSCDRG00005005936) #8	NDRG4 (ENSCDRG00005005703) #9	GINS3 (ENSCDRG00005005673) #10	PRSS54 (ENSCDRG00005005634) #11	CCDC113 (ENSCDRG00005005577) #12	CSNK2A2 (ENSCDRG00005005512) #14	ENSCDRG00005005490	CFAP20 (ENSCDRG00005005469) #15	MMP15 (ENSCDRG00005005433) #16	USB1 (ENSCDRG00005005350) #17	ZNF319 (ENSCDRG00005005311)	TEPP (ENSCDRG00005005268) #18	ENSCDRG00005005222	ENSCDRG00005005181	KIFC3 (ENSCDRG00005005105) #22	KATNB1 (ENSCDRG00005005031) #23	DRC7 (ENSCDRG00005004829) #24	ADGRG3 (ENSCDRG00005004704) #25	ADGRG1 (ENSCDRG00005004615) #26	ENSCDRG00005004533 #27	CCDC102A (ENSCDRG00005004477) #28	DOK4 (ENSCDRG00005004429) #29	POLR2C (ENSCDRG00005004334) #30	COQ9 (ENSCDRG00005004208) #31	CIAPIN1 (ENSCDRG00005004075) #32	CCL17 (ENSCDRG00005004041) #33	CX3CL1 (ENSCDRG00005003917) #35	CCL22 (ENSCDRG00005003858) #36	ENSCDRG00005003811	ARL2BP (ENSCDRG00005003675)
Alpaca	MODERN SPECIES	783															ENSVPAG00000000190	ENSVPAG00000000189 #22
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT00940000166352	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Megabat	MODERN SPECIES	961															ENSPVAG00000001410 #21	KIFC3 (ENSPVAG00000001409) #22	KATNB1 (ENSPVAG00000001408) #23	DRC7 (ENSPVAG00000001407) #24	ADGRG3 (ENSPVAG00000001406) #25	ADGRG1 (ENSPVAG00000001405) #26	ENSPVAG00000001404 #27	CCDC102A (ENSPVAG00000001403) #28	DOK4 (ENSPVAG00000001401) #29	POLR2C (ENSPVAG00000001399) #30	COQ9 (ENSPVAG00000001398) #31	CIAPIN1 (ENSPVAG00000001397) #32	ENSPVAG00000001395	CX3CL1 (ENSPVAG00000001394) #35	ENSPVAG00000001393	PLLP (ENSPVAG00000001392)	ARL2BP (ENSPVAG00000001391)
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Microbat	MODERN SPECIES	1576															ENSMLUG00000002984	KIFC3 (ENSMLUG00000009342) #22	KATNB1 (ENSMLUG00000009307) #23	DRC7 (ENSMLUG00000009275) #24	ADGRG3 (ENSMLUG00000009243) #25	ADGRG1 (ENSMLUG00000009192) #26	ADGRG5 (ENSMLUG00000009167) #27	ENSMLUG00000027471	CCDC102A (ENSMLUG00000004093) #28	DOK4 (ENSMLUG00000015839) #29	ENSMLUG00000015833 #30	COQ9 (ENSMLUG00000015820) #31	CIAPIN1 (ENSMLUG00000015806) #32	CCL17 (ENSMLUG00000015801) #33
Greater horseshoe bat	MODERN SPECIES	6	GOT2 (ENSRFEG00010010217)	SLC38A7 (ENSRFEG00010010127)	CNOT1 (ENSRFEG00010010002) #7	SETD6 (ENSRFEG00010009933) #8	NDRG4 (ENSRFEG00010009611) #9	GINS3 (ENSRFEG00010009530) #10	PRSS54 (ENSRFEG00010009504) #11	CCDC113 (ENSRFEG00010009440) #12	CSNK2A2 (ENSRFEG00010009368) #14	CFAP20 (ENSRFEG00010009337) #15	MMP15 (ENSRFEG00010009308) #16	USB1 (ENSRFEG00010009236) #17	ZNF319 (ENSRFEG00010009209)	TEPP (ENSRFEG00010009138) #18	ENSRFEG00010008461	KIFC3 (ENSRFEG00010008081) #22	KATNB1 (ENSRFEG00010008011) #23	DRC7 (ENSRFEG00010007657) #24	ADGRG3 (ENSRFEG00010007599) #25	ADGRG1 (ENSRFEG00010007425) #26	ADGRG5 (ENSRFEG00010007345) #27	CCDC102A (ENSRFEG00010007311) #28	DOK4 (ENSRFEG00010007266) #29	POLR2C (ENSRFEG00010007222) #30	COQ9 (ENSRFEG00010007135) #31	CIAPIN1 (ENSRFEG00010007021) #32	ENSRFEG00010006940 #35	CCL22 (ENSRFEG00010006888) #36	ENSRFEG00010006869	PLLP (ENSRFEG00010006838)	ENSRFEG00010020712
Equus	ANCESTRAL SPECIES	20	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Horse	MODERN SPECIES	22	SLC38A7 (ENSECAG00000007736)	CNOT1 (ENSECAG00000009889) #7	SETD6 (ENSECAG00000008587) #8	NDRG4 (ENSECAG00000000099) #9	GINS3 (ENSECAG00000022245) #10	PRSS54 (ENSECAG00000020386) #11	CCDC113 (ENSECAG00000017990) #12	CSNK2A2 (ENSECAG00000014130) #14	CFAP20 (ENSECAG00000011027) #15	MMP15 (ENSECAG00000000196) #16	USB1 (ENSECAG00000019493) #17	ZNF319 (ENSECAG00000019473)	TEPP (ENSECAG00000054197) #18	ENSECAG00000030655	ENSECAG00000014030	KIFC3 (ENSECAG00000008497) #22	KATNB1 (ENSECAG00000016979) #23	DRC7 (ENSECAG00000012552) #24	ADGRG3 (ENSECAG00000010523) #25	ADGRG1 (ENSECAG00000021413) #26	ADGRG5 (ENSECAG00000021014) #27	CCDC102A (ENSECAG00000020196) #28	DOK4 (ENSECAG00000018550) #29	POLR2C (ENSECAG00000015818) #30	COQ9 (ENSECAG00000008003) #31	CIAPIN1 (ENSECAG00000000060) #32	ENSECAG00000031387 #35	CCL22 (ENSECAG00000040031) #36	ENSECAG00000044219	PLLP (ENSECAG00000018044)	ARL2BP (ENSECAG00000016621)
Donkey	MODERN SPECIES	20	SLC38A7 (ENSEASG00005010854)	ENSEASG00005035398	CNOT1 (ENSEASG00005005819) #7	ENSEASG00005005524 #8	NDRG4 (ENSEASG00005005520) #9	GINS3 (ENSEASG00005025728) #10	PRSS54 (ENSEASG00005028443) #11	CCDC113 (ENSEASG00005005498) #12	CSNK2A2 (ENSEASG00005005494) #14	CFAP20 (ENSEASG00005005491) #15	MMP15 (ENSEASG00005005488) #16	USB1 (ENSEASG00005032021) #17	ZNF319 (ENSEASG00005005481)	TEPP (ENSEASG00005005468) #18	CNGB1 (ENSEASG00005005456) #20	KIFC3 (ENSEASG00005005444) #22	KATNB1 (ENSEASG00005005438) #23	DRC7 (ENSEASG00005005434) #24	ADGRG3 (ENSEASG00005005429) #25	ADGRG1 (ENSEASG00005005422) #26	ADGRG5 (ENSEASG00005005417) #27	CCDC102A (ENSEASG00005024615) #28	DOK4 (ENSEASG00005005410) #29	POLR2C (ENSEASG00005005406) #30	COQ9 (ENSEASG00005005400) #31	CIAPIN1 (ENSEASG00005005394) #32	ENSEASG00005026962 #33	CX3CL1 (ENSEASG00005029183) #35	CCL22 (ENSEASG00005005377) #36	PLLP (ENSEASG00005036263)	ARL2BP (ENSEASG00005024144)
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a.h.b.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A.j #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Ursus	ANCESTRAL SPECIES	26	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a.h.b.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A.j #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
American black bear	MODERN SPECIES	1205																KIFC3 (ENSUAMG00000022374) #22	KATNB1 (ENSUAMG00000022376) #23	DRC7 (ENSUAMG00000022377) #24	ADGRG3 (ENSUAMG00000022378) #25	ADGRG1 (ENSUAMG00000022379) #26	ADGRG5 (ENSUAMG00000022380) #27
Polar bear	MODERN SPECIES	246	SLC38A7 (ENSUMAG00000021276)	CNOT1 (ENSUMAG00000021291) #7	SETD6 (ENSUMAG00000021301) #8	NDRG4 (ENSUMAG00000021334) #9	ENSUMAG00000021342	GINS3 (ENSUMAG00000021344) #10	PRSS54 (ENSUMAG00000021346) #11	CCDC113 (ENSUMAG00000021357) #12	CSNK2A2 (ENSUMAG00000021361) #14	CFAP20 (ENSUMAG00000021364) #15	MMP15 (ENSUMAG00000021366) #16	USB1 (ENSUMAG00000021369) #17	TEPP (ENSUMAG00000021374) #18	ENSUMAG00000021379	ENSUMAG00000021385	KIFC3 (ENSUMAG00000021391) #22	KATNB1 (ENSUMAG00000021407) #23	DRC7 (ENSUMAG00000021592) #24	ADGRG3 (ENSUMAG00000021634) #25	ADGRG1 (ENSUMAG00000021650) #26	ADGRG5 (ENSUMAG00000021677) #27	CCDC102A (ENSUMAG00000021681) #28	DOK4 (ENSUMAG00000021685) #29	POLR2C (ENSUMAG00000021686) #30	COQ9 (ENSUMAG00000021687) #31	CIAPIN1 (ENSUMAG00000021689) #32	CCL17 (ENSUMAG00000021690) #33	CX3CL1 (ENSUMAG00000021692) #35	CCL22 (ENSUMAG00000021694) #36	PLLP (ENSUMAG00000021697)	ARL2BP (ENSUMAG00000021702)
Giant Panda	MODERN SPECIES	3	ENSAMEG00000026983	GOT2 (ENSAMEG00000017346)	SLC38A7 (ENSAMEG00000017337)	CNOT1 (ENSAMEG00000017298) #7	SETD6 (ENSAMEG00000017290) #8	ENSAMEG00000017262 #9	GINS3 (ENSAMEG00000028403) #10	ENSAMEG00000029388 #11	CCDC113 (ENSAMEG00000017237) #12	CSNK2A2 (ENSAMEG00000025254) #14	CFAP20 (ENSAMEG00000017228) #15	MMP15 (ENSAMEG00000017214) #16	USB1 (ENSAMEG00000017205) #17	TEPP (ENSAMEG00000017192) #18	ENSAMEG00000017173	KIFC3 (ENSAMEG00000017150) #22	KATNB1 (ENSAMEG00000017110) #23	DRC7 (ENSAMEG00000017102) #24	ADGRG3 (ENSAMEG00000017096) #25	ADGRG1 (ENSAMEG00000017074) #26	ADGRG5 (ENSAMEG00000017060) #27	CCDC102A (ENSAMEG00000017054) #28	DOK4 (ENSAMEG00000017041) #29	POLR2C (ENSAMEG00000017026) #30	COQ9 (ENSAMEG00000017000) #31	CIAPIN1 (ENSAMEG00000016974) #32	CCL17 (ENSAMEG00000028607) #33	CX3CL1 (ENSAMEG00000028083) #35	CCL22 (ENSAMEG00000024566) #36	PLLP (ENSAMEG00000016942)	ARL2BP (ENSAMEG00000016928)
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
American mink	MODERN SPECIES	2	GOT2 (ENSNVIG00000012297)	S38A7 (ENSNVIG00000012380)	CNOT1 (ENSNVIG00000012524) #7	SETD6 (ENSNVIG00000013007) #8	NDRG4 (ENSNVIG00000013270) #9	GINS3 (ENSNVIG00000013997) #10	ENSNVIG00000014022 #11	CCDC113 (ENSNVIG00000014075) #12	CSNK2A2 (ENSNVIG00000014190) #14	CP080 (ENSNVIG00000014263) #15	MMP15 (ENSNVIG00000014370) #16	USB1 (ENSNVIG00000014435) #17	ZNF319 (ENSNVIG00000014526)	TEPP (ENSNVIG00000014537) #18	ENSNVIG00000014701	KIFC3 (ENSNVIG00000014809) #22	KATNB1 (ENSNVIG00000015010) #23	ENSNVIG00000015075	ADGRG3 (ENSNVIG00000015084) #25	ADGRG1 (ENSNVIG00000015117) #26	ADGRG5 (ENSNVIG00000015198) #27	CCDC102A (ENSNVIG00000015242) #28	DOK4 (ENSNVIG00000015298) #29	RPB3 (ENSNVIG00000015333) #30	COQ9 (ENSNVIG00000015381) #31	CIAPIN1 (ENSNVIG00000015439) #32	CCL17 (ENSNVIG00000015533) #33	CX3CL1 (ENSNVIG00000015547) #35	ENSNVIG00000015563	CCL22 (ENSNVIG00000015571) #36	PLLP (ENSNVIG00000015585)
Ferret	MODERN SPECIES	174	ENSMPUG00000004862	SLC38A7 (ENSMPUG00000004853)	CNOT1 (ENSMPUG00000004830) #7	SETD6 (ENSMPUG00000004820) #8	NDRG4 (ENSMPUG00000004811) #9	GINS3 (ENSMPUG00000004806) #10	PRSS54 (ENSMPUG00000004805) #11	CCDC113 (ENSMPUG00000004801) #12	CSNK2A2 (ENSMPUG00000004713) #14	CFAP20 (ENSMPUG00000004704) #15	MMP15 (ENSMPUG00000004693) #16	USB1 (ENSMPUG00000004684) #17	ZNF319 (ENSMPUG00000004675)	TEPP (ENSMPUG00000004667) #18	ENSMPUG00000004646	KIFC3 (ENSMPUG00000004627) #22	KATNB1 (ENSMPUG00000004607) #23	DRC7 (ENSMPUG00000004602) #24	ADGRG3 (ENSMPUG00000004553) #25	ADGRG1 (ENSMPUG00000004538) #26	ADGRG5 (ENSMPUG00000004521) #27	CCDC102A (ENSMPUG00000004508) #28	DOK4 (ENSMPUG00000004496) #29	POLR2C (ENSMPUG00000004483) #30	COQ9 (ENSMPUG00000004413) #31	CIAPIN1 (ENSMPUG00000004406) #32	CCL17 (ENSMPUG00000004399) #33	CX3CL1 (ENSMPUG00000004388) #35	CCL22 (ENSMPUG00000004380) #36	PLLP (ENSMPUG00000004358)	ARL2BP (ENSMPUG00000004306)
Canidae	ANCESTRAL SPECIES	14	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a
Dog	MODERN SPECIES	11	GOT2 (ENSCAFG00845001418)	SLC38A7 (ENSCAFG00845001448)	CNOT1 (ENSCAFG00845001575) #7	SETD6 (ENSCAFG00845001902) #8	NDRG4 (ENSCAFG00845002044) #9	PRSS54 (ENSCAFG00845002196) #11	GINS3 (ENSCAFG00845002220) #10	CCDC113 (ENSCAFG00845002256) #12	CSNK2A2 (ENSCAFG00845002309) #14	CFAP20 (ENSCAFG00845002358) #15	MMP15 (ENSCAFG00845002380) #16	USB1 (ENSCAFG00845002434) #17	ZNF319 (ENSCAFG00845002486)	TEPP (ENSCAFG00845002495) #18	CNGB1 (ENSCAFG00845002559) #20	KIFC3 (ENSCAFG00845002649) #22	KATNB1 (ENSCAFG00845002757) #23	DRC7 (ENSCAFG00845002816) #24	ADGRG3 (ENSCAFG00845002879) #25	ADGRG1 (ENSCAFG00845002971) #26	ADGRG5 (ENSCAFG00845003033) #27	CCDC102A (ENSCAFG00845003080) #28	DOK4 (ENSCAFG00845003129) #29	POLR2C (ENSCAFG00845003162) #30	COQ9 (ENSCAFG00845003257) #31	CIAPIN1 (ENSCAFG00845003295) #32	CCL17 (ENSCAFG00845003329)	CX3CL1 (ENSCAFG00845003350) #35	CCL22 (ENSCAFG00845003433) #36	PLLP (ENSCAFG00845003512)	ARL2BP (ENSCAFG00845003542)
Dingo	MODERN SPECIES	41	GOT2 (ENSCAFG00020016964)	SLC38A7 (ENSCAFG00020016917)	CNOT1 (ENSCAFG00020010156) #7	SETD6 (ENSCAFG00020010005) #8	ENSCAFG00020009989 #9	ENSCAFG00020009986	PRSS54 (ENSCAFG00020009957) #11	CCDC113 (ENSCAFG00020009951) #12	CSNK2A2 (ENSCAFG00020009302) #14	CFAP20 (ENSCAFG00020009286) #15	MMP15 (ENSCAFG00020009269) #16	USB1 (ENSCAFG00020009263) #17	ZNF319 (ENSCAFG00020009237)	ENSCAFG00020009212 #18	CNGB1 (ENSCAFG00020009200) #20	KIFC3 (ENSCAFG00020008850) #22	KATNB1 (ENSCAFG00020008553) #23	DRC7 (ENSCAFG00020008535) #24	ADGRG3 (ENSCAFG00020008486) #25	ADGRG1 (ENSCAFG00020007972) #26	ADGRG5 (ENSCAFG00020007954) #27	CCDC102A (ENSCAFG00020007932) #28	DOK4 (ENSCAFG00020007922) #29	POLR2C (ENSCAFG00020007660) #30	COQ9 (ENSCAFG00020007641) #31	CIAPIN1 (ENSCAFG00020007560) #32	CCL17 (ENSCAFG00020007551) #33	CX3CL1 (ENSCAFG00020007547) #35	CCL22 (ENSCAFG00020007531) #36	ENSCAFG00020007469	RSPRY1 (ENSCAFG00020006903)
Red fox	MODERN SPECIES	87	GOT2 (ENSVVUG00000027097)	SLC38A7 (ENSVVUG00000027091)	CNOT1 (ENSVVUG00000024037) #7	SETD6 (ENSVVUG00000023832) #8	NDRG4 (ENSVVUG00000023743) #9	GINS3 (ENSVVUG00000023731) #10	PRSS54 (ENSVVUG00000023729) #11	CCDC113 (ENSVVUG00000023728) #12	CSNK2A2 (ENSVVUG00000023723) #14	CFAP20 (ENSVVUG00000023720) #15	MMP15 (ENSVVUG00000023712) #16	USB1 (ENSVVUG00000023700) #17	ZNF319 (ENSVVUG00000023697)	TEPP (ENSVVUG00000023696) #18	CNGB1 (ENSVVUG00000023693) #20	KIFC3 (ENSVVUG00000023671) #22	KATNB1 (ENSVVUG00000023658) #23	DRC7 (ENSVVUG00000023648) #24	ADGRG3 (ENSVVUG00000023583) #25	ADGRG1 (ENSVVUG00000023573) #26	ENSVVUG00000023571	ADGRG5 (ENSVVUG00000023569) #27	CCDC102A (ENSVVUG00000023534) #28	DOK4 (ENSVVUG00000023524) #29	POLR2C (ENSVVUG00000023516) #30	COQ9 (ENSVVUG00000023513) #31	CIAPIN1 (ENSVVUG00000023511) #32	CCL17 (ENSVVUG00000023510) #33	CX3CL1 (ENSVVUG00000023508) #35	CCL22 (ENSVVUG00000023505) #36	ENSVVUG00000023501
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.g #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.gb.a
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.g #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.gb.a
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417.g #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011	ENSGT00390000015052.i.a.gb.a
lion	MODERN SPECIES	15	SLC38A7 (ENSPLOG00000014987)	CNOT1 (ENSPLOG00000014526) #7	SETD6 (ENSPLOG00000014319) #8	NDRG4 (ENSPLOG00000013343) #9	GINS3 (ENSPLOG00000013168) #10	ENSPLOG00000013054 #11	CCDC113 (ENSPLOG00000012766) #12	CSNK2A2 (ENSPLOG00000012711) #14	CFAP20 (ENSPLOG00000012677) #15	MMP15 (ENSPLOG00000012566) #16	USB1 (ENSPLOG00000012465) #17	ZNF319 (ENSPLOG00000012434)	TEPP (ENSPLOG00000012337) #18	ENSPLOG00000012259	ENSPLOG00000012107	KIFC3 (ENSPLOG00000011761) #22	ENSPLOG00000011732 #23	DRC7 (ENSPLOG00000011464) #24	ADGRG3 (ENSPLOG00000011279) #25	ADGRG1 (ENSPLOG00000011086) #26	ADGRG5 (ENSPLOG00000011027) #27	CCDC102A (ENSPLOG00000010929) #28	DOK4 (ENSPLOG00000010900) #29	POLR2C (ENSPLOG00000010866) #30	COQ9 (ENSPLOG00000010786) #31	CIAPIN1 (ENSPLOG00000010683) #32	CCL17 (ENSPLOG00000010613) #33	CX3CL1 (ENSPLOG00000010581) #35	CCL22 (ENSPLOG00000010553) #36	PLLP (ENSPLOG00000010492)	ENSPLOG00000010425
leopard	MODERN SPECIES	28	ENSPPRG00000005983	SLC38A7 (ENSPPRG00000005811)	CNOT1 (ENSPPRG00000004867) #7	SETD6 (ENSPPRG00000002961) #8	NDRG4 (ENSPPRG00000001537) #9	GINS3 (ENSPPRG00000023336) #10	PRSS54 (ENSPPRG00000023521) #11	CCDC113 (ENSPPRG00000023650) #12	CSNK2A2 (ENSPPRG00000023807) #14	CFAP20 (ENSPPRG00000024682) #15	MMP15 (ENSPPRG00000024709) #16	USB1 (ENSPPRG00000024797) #17	ZNF319 (ENSPPRG00000015444)	TEPP (ENSPPRG00000021075) #18	ENSPPRG00000019036	KIFC3 (ENSPPRG00000013473) #22	KATNB1 (ENSPPRG00000011188) #23	DRC7 (ENSPPRG00000009290) #24	ADGRG3 (ENSPPRG00000007606) #25	ADGRG1 (ENSPPRG00000007219) #26	ADGRG5 (ENSPPRG00000004688) #27	CCDC102A (ENSPPRG00000003597) #28	DOK4 (ENSPPRG00000003432) #29	POLR2C (ENSPPRG00000003215) #30	COQ9 (ENSPPRG00000003121) #31	ENSPPRG00000001346 #32	CCL17 (ENSPPRG00000022710) #33	CX3CL1 (ENSPPRG00000022598) #35	CCL22 (ENSPPRG00000020393) #36	PLLP (ENSPPRG00000020161)	ENSPPRG00000014525
Tiger	MODERN SPECIES	320	ENSPTIG00000014768	GOT2 (ENSPTIG00000014554)	SLC38A7 (ENSPTIG00000013817)	CNOT1 (ENSPTIG00000012589) #7	SETD6 (ENSPTIG00000012197) #8	NDRG4 (ENSPTIG00000011263) #9	GINS3 (ENSPTIG00000010688) #10	PRSS54 (ENSPTIG00000010343) #11	CCDC113 (ENSPTIG00000009933) #12	CSNK2A2 (ENSPTIG00000009043) #14	CFAP20 (ENSPTIG00000008900) #15	MMP15 (ENSPTIG00000008565) #16	USB1 (ENSPTIG00000007506) #17	TEPP (ENSPTIG00000006904) #18	ENSPTIG00000020933	KIFC3 (ENSPTIG00000019840) #22	KATNB1 (ENSPTIG00000018868) #23	DRC7 (ENSPTIG00000017307) #24	ADGRG3 (ENSPTIG00000016329) #25	ADGRG1 (ENSPTIG00000012851) #26	ADGRG5 (ENSPTIG00000011701) #27	CCDC102A (ENSPTIG00000011442) #28	DOK4 (ENSPTIG00000010745) #29	POLR2C (ENSPTIG00000010297) #30	COQ9 (ENSPTIG00000009553) #31	CIAPIN1 (ENSPTIG00000007594) #32	CCL17 (ENSPTIG00000006867) #33	CX3CL1 (ENSPTIG00000006321) #35	CCL22 (ENSPTIG00000005968) #36	PLLP (ENSPTIG00000005275)	ENSPTIG00000002280
Cat	MODERN SPECIES	246	GOT2 (ENSFCAG00000025552)	SLC38A7 (ENSFCAG00000003119)	CNOT1 (ENSFCAG00000025155) #7	SETD6 (ENSFCAG00000006604) #8	NDRG4 (ENSFCAG00000006601) #9	GINS3 (ENSFCAG00000024373) #10	PRSS54 (ENSFCAG00000041836) #11	CCDC113 (ENSFCAG00000006596) #12	CSNK2A2 (ENSFCAG00000030709) #14	CFAP20 (ENSFCAG00000015358) #15	MMP15 (ENSFCAG00000002694) #16	USB1 (ENSFCAG00000002693) #17	ZNF319 (ENSFCAG00000024689)	TEPP (ENSFCAG00000031698) #18	ENSFCAG00000002691	KIFC3 (ENSFCAG00000002689) #22	KATNB1 (ENSFCAG00000002687) #23	DRC7 (ENSFCAG00000007761) #24	ADGRG3 (ENSFCAG00000007756) #25	ADGRG1 (ENSFCAG00000006651) #26	ADGRG5 (ENSFCAG00000002685) #27	CCDC102A (ENSFCAG00000023706) #28	DOK4 (ENSFCAG00000004698) #29	POLR2C (ENSFCAG00000034622) #30	COQ9 (ENSFCAG00000004696) #31	CIAPIN1 (ENSFCAG00000004695) #32	CCL17 (ENSFCAG00000004694) #33	CX3CL1 (ENSFCAG00000004692) #35	CCL22 (ENSFCAG00000038005) #36	RSPRY1 (ENSFCAG00000002936)	PSME3IP1 (ENSFCAG00000044458)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154022.a.a #22
Hedgehog	MODERN SPECIES	8623																KIFC3 (ENSEEUG00000012675) #22	DRC7 (ENSEEUG00000012633) #24	ADGRG3 (ENSEEUG00000012581) #25	ADGRG1 (ENSEEUG00000012477) #26
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT00940000166300	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Afrotheria	ANCESTRAL SPECIES	44										ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT00940000166300	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Afrotheria_a	ANCESTRAL SPECIES	43										ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00570000079722	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33	ENSGT00940000166300	ENSGT01100000263557.A.b.a.a.a.b #35	ENSGT01100000263482.A.a.b #36	ENSGT00940000156011
Hyrax	MODERN SPECIES	7177															ENSPCAG00000012140 #21	KIFC3 (ENSPCAG00000011969) #22	KATNB1 (ENSPCAG00000011816) #23	DRC7 (ENSPCAG00000011648) #24	ENSPCAG00000011477 #25	ADGRG1 (ENSPCAG00000011374) #26
Elephant	MODERN SPECIES	393										MMP15 (ENSLAFG00000012797) #16	USB1 (ENSLAFG00000002267) #17	ZNF319 (ENSLAFG00000002266)	TEPP (ENSLAFG00000002264) #18	ENSLAFG00000029380	ENSLAFG00000006541	KIFC3 (ENSLAFG00000030014) #22	KATNB1 (ENSLAFG00000012468) #23	DRC7 (ENSLAFG00000011783) #24	ADGRG3 (ENSLAFG00000011774) #25	ADGRG1 (ENSLAFG00000011400) #26	ENSLAFG00000014363 #27	CCDC102A (ENSLAFG00000002365) #28	DOK4 (ENSLAFG00000029295) #29	POLR2C (ENSLAFG00000027230) #30	COQ9 (ENSLAFG00000002127) #31	CIAPIN1 (ENSLAFG00000002125) #32	CCL17 (ENSLAFG00000002124) #33	CX3CL1 (ENSLAFG00000022427) #35	CCL22 (ENSLAFG00000013611) #36	PLLP (ENSLAFG00000008636)	ENSLAFG00000008633
Xenarthra	ANCESTRAL SPECIES	378																ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a.b #33
Armadillo	MODERN SPECIES	2553																KIFC3 (ENSDNOG00000033803) #22	KATNB1 (ENSDNOG00000044812) #23	DRC7 (ENSDNOG00000006884) #24	ADGRG3 (ENSDNOG00000007993) #25	ADGRG1 (ENSDNOG00000000027) #26	ADGRG5 (ENSDNOG00000049089) #27	CCDC102A (ENSDNOG00000015615) #28	DOK4 (ENSDNOG00000045703) #29	ENSDNOG00000030752 #30	COQ9 (ENSDNOG00000000874) #31	CIAPIN1 (ENSDNOG00000039865) #32	ENSDNOG00000035626 #33
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00940000162037	ENSGT00940000156753.b	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00880000138014.a	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT01020000234468	ENSGT01100000264428	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT01020000234468	ENSGT01100000264428	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00940000158136	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT01020000234468	ENSGT00940000156753.a.a.b	ENSGT01100000264428	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000014879.c.a
Common wonbat	MODERN SPECIES	771	ENSVURG00010000826	SLC38A7 (ENSVURG00010000800)	CNOT1 (ENSVURG00010000546) #7	SETD6 (ENSVURG00010000519) #8	NDRG4 (ENSVURG00010000369) #9	GINS3 (ENSVURG00010025009) #10	ENSVURG00010025008 #11	CCDC113 (ENSVURG00010025007) #12	CSNK2A2 (ENSVURG00010025005) #14	CFAP20 (ENSVURG00010025001) #15	MMP15 (ENSVURG00010025000) #16	USB1 (ENSVURG00010024998) #17	ZNF319 (ENSVURG00010024997)	TEPP (ENSVURG00010024996) #18	ENSVURG00010024994	KIFC3 (ENSVURG00010024990) #22	KATNB1 (ENSVURG00010024988) #23	DRC7 (ENSVURG00010024986) #24	ADGRG3 (ENSVURG00010024984) #25	ADGRG1 (ENSVURG00010024982) #26	ENSVURG00010024979 #27	ENSVURG00010024977	ENSVURG00010024976	ENSVURG00010024975
koala	MODERN SPECIES	146	CMTR2 (ENSPCIG00000015810)	CALB2 (ENSPCIG00000015805)	GOT2 (ENSPCIG00000015804)	SLC38A7 (ENSPCIG00000015802)	ENSPCIG00000008390	CNOT1 (ENSPCIG00000007343) #7	NDRG4 (ENSPCIG00000007168) #9	GINS3 (ENSPCIG00000003656) #10	CCDC113 (ENSPCIG00000007149) #12	CSNK2A2 (ENSPCIG00000007143) #14	ENSPCIG00000007140 #15	MMP15 (ENSPCIG00000007130) #16	ZNF319 (ENSPCIG00000007127)	TEPP (ENSPCIG00000007125) #18	ENSPCIG00000007118	KIFC3 (ENSPCIG00000007108) #22	KATNB1 (ENSPCIG00000007102) #23	DRC7 (ENSPCIG00000008593) #24	ENSPCIG00000032443	ADGRG3 (ENSPCIG00000016187) #25	ADGRG1 (ENSPCIG00000016189) #26	ENSPCIG00000022759 #27	ENSPCIG00000001328	ENSPCIG00000008413	ENSPCIG00000012984	ENSPCIG00000012982	ENSPCIG00000032656	POLM (ENSPCIG00000002853)	PGAM2 (ENSPCIG00000002837)	ENSPCIG00000002818	ENSPCIG00000019204
Wallaby	MODERN SPECIES	4828																KIFC3 (ENSMEUG00000012871) #22
Tasmanian devil	MODERN SPECIES	1	SLC38A7 (ENSSHAG00000011773)	ENSSHAG00000011945	CNOT1 (ENSSHAG00000012187) #7	SETD6 (ENSSHAG00000012620) #8	NDRG4 (ENSSHAG00000012683) #9	GINS3 (ENSSHAG00000026774) #10	ENSSHAG00000021506 #11	CCDC113 (ENSSHAG00000032387) #12	CSNK2A2 (ENSSHAG00000003403) #14	CFAP20 (ENSSHAG00000005074) #15	MMP15 (ENSSHAG00000006598) #16	USB1 (ENSSHAG00000024120) #17	ZNF319 (ENSSHAG00000031600)	TEPP (ENSSHAG00000007313) #18	ENSSHAG00000024794	KIFC3 (ENSSHAG00000031697) #22	KATNB1 (ENSSHAG00000022649) #23	DRC7 (ENSSHAG00000006675) #24	ENSSHAG00000006225 #25	ENSSHAG00000005146 #26	ENSSHAG00000003822 #27	ENSSHAG00000029230	ENSSHAG00000001828	ENSSHAG00000001442	ENSSHAG00000024438	ENSSHAG00000002674	PGAM2 (ENSSHAG00000003170)	DBNL (ENSSHAG00000003404)	UBE2D4 (ENSSHAG00000024831)	ENSSHAG00000005460	ENSSHAG00000020918
Opossum	MODERN SPECIES		CNOT1 (ENSMODG00000014199) #7	SETD6 (ENSMODG00000014173) #8	NDRG4 (ENSMODG00000014164) #9	GINS3 (ENSMODG00000014145) #10	ENSMODG00000047467	ENSMODG00000048605	ENSMODG00000014140 #11	CCDC113 (ENSMODG00000014138) #12	CSNK2A2 (ENSMODG00000014080) #14	CFAP20 (ENSMODG00000014076) #15	MMP15 (ENSMODG00000014071) #16	USB1 (ENSMODG00000014067) #17	ZNF319 (ENSMODG00000023065)	TEPP (ENSMODG00000014064) #18	ENSMODG00000014063	KIFC3 (ENSMODG00000014047) #22	KATNB1 (ENSMODG00000014037) #23	DRC7 (ENSMODG00000014032) #24	ENSMODG00000014021 #25	ADGRG1 (ENSMODG00000014011) #26	ENSMODG00000014001 #27	ENSMODG00000013954	ENSMODG00000023063	ENSMODG00000051193	ENSMODG00000046760	ENSMODG00000043486	POLM (ENSMODG00000013922)	PGAM2 (ENSMODG00000013911)	DBNL (ENSMODG00000013906)	ENSMODG00000047112	ENSMODG00000023062
Platypus	MODERN SPECIES	2	ENSOANG00000012108	ENSOANG00000036320	CNOT1 (ENSOANG00000012109) #7	SETD6 (ENSOANG00000012110) #8	NDRG4 (ENSOANG00000012111) #9	GINS3 (ENSOANG00000047639) #10	ENSOANG00000049089 #11	CCDC113 (ENSOANG00000038545) #12	CSNK2A2 (ENSOANG00000012115) #14	CFAP20 (ENSOANG00000043483) #15	MMP15 (ENSOANG00000012117) #16	USB1 (ENSOANG00000012118) #17	ZNF319 (ENSOANG00000006540)	ENSOANG00000050224 #18	ENSOANG00000012119	KIFC3 (ENSOANG00000004494) #22	KATNB1 (ENSOANG00000004682) #23	DRC7 (ENSOANG00000004683) #24	ENSOANG00000004684 #25	ADGRG1 (ENSOANG00000004685) #26	ENSOANG00000004686 #27	CCDC102A (ENSOANG00000049459) #28	DOK4 (ENSOANG00000009336) #29	POLR2C (ENSOANG00000039689) #30	COQ9 (ENSOANG00000009339) #31	CIAPIN1 (ENSOANG00000047266) #32	ENSOANG00000042658	ENSOANG00000041694	PLLP (ENSOANG00000013745)	ARL2BP (ENSOANG00000013746)	RSPRY1 (ENSOANG00000013747)
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01100000263557.A.b.a.a #33	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00510000050177	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d ##14	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894
Archosauria	ANCESTRAL SPECIES	51	ENSGT00390000001622 #10	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d ##14	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32
Aves	ANCESTRAL SPECIES	59			ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d ##14	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32
Neognathae	ANCESTRAL SPECIES	13					ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Galloanserae	ANCESTRAL SPECIES	12							ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Anatidae	ANCESTRAL SPECIES	44	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b	ENSGT00940000153866.B	ENSGT00940000156501	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32
Pink-footed goose	MODERN SPECIES	28	HERPUD1 (ENSABRG00000006746)	ENSABRG00000006749	PARD6A (ENSABRG00000006762)	ENKD1 (ENSABRG00000006779)	ENSABRG00000006804	ENSABRG00000006811	NDRG4 (ENSABRG00000006877) #9	ENSABRG00000007576	CCDC113 (ENSABRG00000007584) #12	CSNK2A2 (ENSABRG00000007626) #14	CFAP20 (ENSABRG00000008039) #15	MMP15 (ENSABRG00000008084) #16	USB1 (ENSABRG00000008263) #17	ZNF319 (ENSABRG00000008378)	CNGB1 (ENSABRG00000008404) #20	KIFC3 (ENSABRG00000008506) #22	KATNB1 (ENSABRG00000008565) #23	DRC7 (ENSABRG00000008588) #24	ENSABRG00000008612	ADGRG3 (ENSABRG00000008622) #25	ADGRG1 (ENSABRG00000008641) #26	ADGRG5 (ENSABRG00000008665) #27	CCDC102A (ENSABRG00000008689) #28	DOK4 (ENSABRG00000008711) #29	POLR2C (ENSABRG00000008751) #30	COQ9 (ENSABRG00000008779) #31	CIAPIN1 (ENSABRG00000008793) #32	ENSABRG00000008807	TDRD12 (ENSABRG00000008836)	SLC7A9 (ENSABRG00000009059)	CEP89 (ENSABRG00000009562)
Duck	MODERN SPECIES	3	RSPRY1 (ENSAPLG00000012937)	PSME3IP1 (ENSAPLG00000013298)	ENSAPLG00000013415	NLRC5 (ENSAPLG00000014412)	CETP (ENSAPLG00000014801)	HERPUD1 (ENSAPLG00000015583)	PARD6A (ENSAPLG00000017430)	ENKD1 (ENSAPLG00000015716)	GFOD2 (ENSAPLG00000015743)	NDRG4 (ENSAPLG00000015766) #9	GINS3 (ENSAPLG00000026073) #10	CCDC113 (ENSAPLG00000016196) #12	CSNK2A2 (ENSAPLG00000016242) #14	CFAP20 (ENSAPLG00000001222) #15	CNGB1 (ENSAPLG00000002819) #20	KIFC3 (ENSAPLG00000003400) #22	KATNB1 (ENSAPLG00000003613) #23	DRC7 (ENSAPLG00000004202) #24	ENSAPLG00000004415	ADGRG3 (ENSAPLG00000004491) #25	ADGRG1 (ENSAPLG00000004555) #26	ADGRG5 (ENSAPLG00000027865) #27	POLR2C (ENSAPLG00000005385) #30	COQ9 (ENSAPLG00000005848) #31	CIAPIN1 (ENSAPLG00000006126) #32	SLC7A9 (ENSAPLG00000006352)	CEP89 (ENSAPLG00000006679)	FAAP24 (ENSAPLG00000006977)	RHPN2 (ENSAPLG00000007093)	GPATCH1 (ENSAPLG00000007584)	WDR88 (ENSAPLG00000007912)
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000157499	ENSGT00400000022168.b	ENSGT00940000156879	ENSGT00390000015672	ENSGT00940000158295.k	ENSGT00940000163576	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Japanese quail	MODERN SPECIES	2	SMPD3 (ENSCJPG00005012382)	PRMT7 (ENSCJPG00005012381)	SLC7A6OS (ENSCJPG00005012380)	ENSCJPG00005012379	ENSCJPG00005012378	ENSCJPG00005012377	NDRG4 (ENSCJPG00005012210) #9	ENSCJPG00005012209	CCDC113 (ENSCJPG00005012208) #12	CSNK2A2 (ENSCJPG00005012207) #14	CFAP20 (ENSCJPG00005012206) #15	MMP15 (ENSCJPG00005012205) #16	USB1 (ENSCJPG00005012204) #17	ZNF319 (ENSCJPG00005012203)	ENSCJPG00005012201	KIFC3 (ENSCJPG00005012200) #22	KATNB1 (ENSCJPG00005012105) #23	DRC7 (ENSCJPG00005012102) #24	ENSCJPG00005012100	ENSCJPG00005012099 #25	ADGRG1 (ENSCJPG00005012073) #26	CCDC102A (ENSCJPG00005012051) #28	DOK4 (ENSCJPG00005012050) #29	POLR2C (ENSCJPG00005012037) #30	COQ9 (ENSCJPG00005012032) #31	CIAPIN1 (ENSCJPG00005012031) #32	ENSCJPG00005012030	ENSCJPG00005012029	ENKD1 (ENSCJPG00005012028)	PARD6A (ENSCJPG00005012027)	ENSCJPG00005012026
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000157499	ENSGT00400000022168.b	ENSGT00940000156879	ENSGT00390000015672	ENSGT00940000158295.k	ENSGT00940000163576	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Turkey	MODERN SPECIES	4	ENSMGAG00000003100	ENSMGAG00000003023	ENSMGAG00000003151	ENSMGAG00000003143	GFOD2 (ENSMGAG00000017669)	ENSMGAG00000003176 #32	ENSMGAG00000003222 #31	ENSMGAG00000022109 #30	ENSMGAG00000003268 #29	ENSMGAG00000017151 #28	DRC7 (ENSMGAG00000003476) #24	ENSMGAG00000003463	ENSMGAG00000003435 #25	ADGRG1 (ENSMGAG00000017222) #26	ENSMGAG00000003513 #23	ENSMGAG00000003302 #22	ENSMGAG00000018367	ENSMGAG00000003563	USB1 (ENSMGAG00000022861) #17	ENSMGAG00000003627 #15	ENSMGAG00000003372 #16	ENSMGAG00000019940	CSNK2A2 (ENSMGAG00000003646) #14	ENSMGAG00000003675 #12	ENSMGAG00000003695 #10	ENSMGAG00000015581	ENSMGAG00000003705 #9	ENSMGAG00000003823	ENSMGAG00000003764	PRMT7 (ENSMGAG00000003832)	ENSMGAG00000003878
Chicken	MODERN SPECIES	2	PLA2G15 (ENSGALG00010022886)	SMPD3 (ENSGALG00010022911)	PRMT7 (ENSGALG00010023024)	SLC7A6OS (ENSGALG00010023046)	SLC7A6 (ENSGALG00010022992)	TLR21 (ENSGALG00010023066)	NDRG4 (ENSGALG00010023119) #9	GINS3 (ENSGALG00010023135) #10	CCDC113 (ENSGALG00010023155) #12	CSNK2A2 (ENSGALG00010023165) #14	CFAP20 (ENSGALG00010023178) #15	MMP15 (ENSGALG00010021358) #16	ZNF319 (ENSGALG00010021412)	USB1 (ENSGALG00010021457) #17	ENSGALG00010021470	KIFC3 (ENSGALG00010021534) #22	KATNB1 (ENSGALG00010021570) #23	DRC7 (ENSGALG00010021692) #24	UMOD (ENSGALG00010024353)	ADGRG3 (ENSGALG00010024466) #25	ADGRG1 (ENSGALG00010024475) #26	ADGRG5 (ENSGALG00010024488) #27	CCDC102A (ENSGALG00010024498) #28	DOK4 (ENSGALG00010022223) #29	POLR2C (ENSGALG00010022241) #30	COQ9 (ENSGALG00010022252) #31	CIAPIN1 (ENSGALG00010022296) #32	GFOD2 (ENSGALG00010022340)	ENKD1 (ENSGALG00010025832)	PARD6A (ENSGALG00010024366)	HERPUD1 (ENSGALG00010024370)
Neognathae_b	ANCESTRAL SPECIES	15					ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00390000004738	ENSGT00390000016908	ENSGT00940000159646	ENSGT00960000189518	ENSGT00940000161531	ENSGT00940000157389	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a
Great tit	MODERN SPECIES	2	CENPN (ENSPMJG00000014005)	CMC2 (ENSPMJG00000014012)	CDYL2 (ENSPMJG00000014015)	ENSPMJG00000014018	MAF (ENSPMJG00000014026)	ENSPMJG00000014027	WWOX (ENSPMJG00000014034)	NDRG4 (ENSPMJG00000014035) #9	GINS3 (ENSPMJG00000014038) #10	CSNK2A2 (ENSPMJG00000014040) #14	CFAP20 (ENSPMJG00000014041) #15	MMP15 (ENSPMJG00000014042) #16	USB1 (ENSPMJG00000014043) #17	ZNF319 (ENSPMJG00000014044)	CNGB1 (ENSPMJG00000014045) #20	KIFC3 (ENSPMJG00000014046) #22	KATNB1 (ENSPMJG00000014048) #23	DRC7 (ENSPMJG00000014051) #24	ENSPMJG00000014052	ADGRG3 (ENSPMJG00000014054) #25	ADGRG1 (ENSPMJG00000014056) #26	CCDC102A (ENSPMJG00000014057) #28	DOK4 (ENSPMJG00000014061) #29	POLR2C (ENSPMJG00000014063) #30	COQ9 (ENSPMJG00000014065) #31	CIAPIN1 (ENSPMJG00000014068) #32	GFOD2 (ENSPMJG00000014071)	PARD6A (ENSPMJG00000014072)	HERPUD1 (ENSPMJG00000014073)	CETP (ENSPMJG00000014074)	NLRC5 (ENSPMJG00000014080)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00390000004738	ENSGT00390000016908	ENSGT00940000159646	ENSGT00960000189518	ENSGT00940000161531	ENSGT00940000157389	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a
Flycatcher	MODERN SPECIES	2	ATMIN (ENSFALG00000006834)	CMC2 (ENSFALG00000026435)	ENSFALG00000006840	MAF (ENSFALG00000006844)	ENSFALG00000023580	ENSFALG00000006846	NDRG4 (ENSFALG00000006850) #9	GINS3 (ENSFALG00000029037) #10	ENSFALG00000006902 #23	CSNK2A2 (ENSFALG00000006864) #14	CFAP20 (ENSFALG00000024771) #15	MMP15 (ENSFALG00000023117) #16	USB1 (ENSFALG00000006876) #17	ZNF319 (ENSFALG00000014292)	CNGB1 (ENSFALG00000006885) #20	KIFC3 (ENSFALG00000006898) #22	DRC7 (ENSFALG00000006910) #24	ENSFALG00000006912	ADGRG3 (ENSFALG00000006914) #25	ADGRG1 (ENSFALG00000006918) #26	CCDC102A (ENSFALG00000006923) #28	DOK4 (ENSFALG00000025361) #29	POLR2C (ENSFALG00000024749) #30	COQ9 (ENSFALG00000006939) #31	CIAPIN1 (ENSFALG00000006952) #32	GFOD2 (ENSFALG00000006955)	ENSFALG00000006958	PARD6A (ENSFALG00000029061)	HERPUD1 (ENSFALG00000006965)	CETP (ENSFALG00000006970)	NLRC5 (ENSFALG00000006980)
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00390000004738	ENSGT00390000016908	ENSGT00940000159646	ENSGT00960000189518	ENSGT00940000161531	ENSGT00940000157389	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000004738	ENSGT00390000016908	ENSGT00940000159646	ENSGT00960000189518	ENSGT00940000161531	ENSGT00940000157389	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a
Zebra finch	MODERN SPECIES	2	ATMIN (ENSTGUG00000004575)	CENPN (ENSTGUG00000004579)	CMC2 (ENSTGUG00000022858)	CDYL2 (ENSTGUG00000004589)	ENSTGUG00000022634	MAF (ENSTGUG00000004610)	WWOX (ENSTGUG00000004614)	NDRG4 (ENSTGUG00000026031) #9	GINS3 (ENSTGUG00000022921) #10	CSNK2A2 (ENSTGUG00000004713) #14	CFAP20 (ENSTGUG00000004759) #15	MMP15 (ENSTGUG00000004764) #16	USB1 (ENSTGUG00000004792) #17	ZNF319 (ENSTGUG00000023895)	ENSTGUG00000004800	KIFC3 (ENSTGUG00000004843) #22	KATNB1 (ENSTGUG00000004876) #23	DRC7 (ENSTGUG00000004909) #24	ENSTGUG00000004927	ADGRG3 (ENSTGUG00000004936) #25	ADGRG1 (ENSTGUG00000004949) #26	CCDC102A (ENSTGUG00000004959) #28	DOK4 (ENSTGUG00000004974) #29	POLR2C (ENSTGUG00000004996) #30	COQ9 (ENSTGUG00000005018) #31	CIAPIN1 (ENSTGUG00000005036) #32	GFOD2 (ENSTGUG00000005053)	ENKD1 (ENSTGUG00000005058)	PARD6A (ENSTGUG00000005063)	HERPUD1 (ENSTGUG00000005066)	CETP (ENSTGUG00000005087)
Common canary	MODERN SPECIES	14	CDYL2 (ENSSCAG00000006552)	ENSSCAG00000006546	MAF (ENSSCAG00000006531)	ENSSCAG00000006519	WWOX (ENSSCAG00000006512)	NDRG4 (ENSSCAG00000006499) #9	ENSSCAG00000006496	GINS3 (ENSSCAG00000006492) #10	CSNK2A2 (ENSSCAG00000006420) #14	ENSSCAG00000006403	CFAP20 (ENSSCAG00000006401) #15	MMP15 (ENSSCAG00000006393) #16	USB1 (ENSSCAG00000006388) #17	ZNF319 (ENSSCAG00000006380)	CNGB1 (ENSSCAG00000006363) #20	KIFC3 (ENSSCAG00000006344) #22	KATNB1 (ENSSCAG00000006326) #23	ENSSCAG00000006306	ADGRG1 (ENSSCAG00000006290) #26	CCDC102A (ENSSCAG00000006284) #28	DOK4 (ENSSCAG00000006277) #29	POLR2C (ENSSCAG00000006272) #30	COQ9 (ENSSCAG00000006264) #31	CIAPIN1 (ENSSCAG00000006259) #32	GFOD2 (ENSSCAG00000006255)	ENKD1 (ENSSCAG00000006250)	PARD6A (ENSSCAG00000006248)	HERPUD1 (ENSSCAG00000006241)	CETP (ENSSCAG00000006237)	CPNE2 (ENSSCAG00000006140)	PSME3IP1 (ENSSCAG00000006124)
Medium ground finch	MODERN SPECIES	46	ATMIN (ENSGFOG00000012302)	CENPN (ENSGFOG00000012298)	CMC2 (ENSGFOG00000012291)	CDYL2 (ENSGFOG00000012287)	ENSGFOG00000012284	ENSGFOG00000012277	WWOX (ENSGFOG00000012276)	NDRG4 (ENSGFOG00000012266) #9	GINS3 (ENSGFOG00000012261) #10	CSNK2A2 (ENSGFOG00000012255) #14	CFAP20 (ENSGFOG00000012251) #15	MMP15 (ENSGFOG00000012247) #16	USB1 (ENSGFOG00000012240) #17	ZNF319 (ENSGFOG00000012238)	ENSGFOG00000012230	KIFC3 (ENSGFOG00000012217) #22	KATNB1 (ENSGFOG00000012190) #23	DRC7 (ENSGFOG00000012179) #24	ENSGFOG00000012162	ADGRG3 (ENSGFOG00000012148) #25	ADGRG1 (ENSGFOG00000012139) #26	CCDC102A (ENSGFOG00000012127) #28	DOK4 (ENSGFOG00000012118) #29	POLR2C (ENSGFOG00000012112) #30	COQ9 (ENSGFOG00000012106) #31	CIAPIN1 (ENSGFOG00000012099) #32	GFOD2 (ENSGFOG00000012095)	ENKD1 (ENSGFOG00000012088)	PARD6A (ENSGFOG00000012085)	HERPUD1 (ENSGFOG00000012078)	CETP (ENSGFOG00000012065)
Neognathae_c	ANCESTRAL SPECIES	18						ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843.c #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156501	ENSGT00940000153866.B	ENSGT00950000183211.a.a.b	ENSGT00390000017671.b
Golden eagle	MODERN SPECIES	25	ENSACCG00020008842	ENSACCG00020008829	ACKR1 (ENSACCG00020008822)	CADM3 (ENSACCG00020008795)	NDRG4 (ENSACCG00020008758) #9	ENSACCG00020008736	GINS3 (ENSACCG00020008729) #10	PRSS54 (ENSACCG00020008692) #11	CCDC113 (ENSACCG00020008655) #12	CSNK2A2 (ENSACCG00020008639) #14	CFAP20 (ENSACCG00020008619) #15	MMP15 (ENSACCG00020008587) #16	USB1 (ENSACCG00020008523) #17	ZNF319 (ENSACCG00020008514)	ENSACCG00020008472	KIFC3 (ENSACCG00020008420) #22	KATNB1 (ENSACCG00020008397) #23	DRC7 (ENSACCG00020008380) #24	ENSACCG00020008369	ADGRG3 (ENSACCG00020008360) #25	ADGRG1 (ENSACCG00020008342) #26	ADGRG5 (ENSACCG00020008329) #27	CCDC102A (ENSACCG00020008314) #28	DOK4 (ENSACCG00020008300) #29	POLR2C (ENSACCG00020008290) #30	COQ9 (ENSACCG00020008277) #31	CIAPIN1 (ENSACCG00020008255) #32	GFOD2 (ENSACCG00020008241)	ENKD1 (ENSACCG00020008233)	PARD6A (ENSACCG00020008225)	HERPUD1 (ENSACCG00020008207)
Kakapo	MODERN SPECIES	19	ZDHHC1 (ENSSHBG00005003067)	TPPP3 (ENSSHBG00005003086)	ENSSHBG00005003102	SLC9A5 (ENSSHBG00005003124)	HSD11B2 (ENSSHBG00005003145)	ATP6V0D1 (ENSSHBG00005003170)	AGRP (ENSSHBG00005003182)	ENSSHBG00005003197	ENSSHBG00005003216	SETD6 (ENSSHBG00005003234) #8	ENSSHBG00005003264 #7	ENSSHBG00005003333 #7	USB1 (ENSSHBG00005003344) #17	ZNF319 (ENSSHBG00005003353)	ENSSHBG00005003374	KIFC3 (ENSSHBG00005003399) #22	KATNB1 (ENSSHBG00005003438) #23	DRC7 (ENSSHBG00005003468) #24	ENSSHBG00005003490	ADGRG3 (ENSSHBG00005003503) #25	ENSSHBG00005003523 #26	CCDC102A (ENSSHBG00005003552) #28	DOK4 (ENSSHBG00005003571) #29	POLR2C (ENSSHBG00005003604) #30	COQ9 (ENSSHBG00005003629) #31	ENSSHBG00005003646 #32	GFOD2 (ENSSHBG00005003655)	ENKD1 (ENSSHBG00005003663)	ENSSHBG00005000151	ENSSHBG00005001387	CETP (ENSSHBG00005001455)
African ostrich	MODERN SPECIES	305					NDRG4 (ENSSCUG00000001398) #9	GINS3 (ENSSCUG00000001397) #10	ENSSCUG00000001396	PRSS54 (ENSSCUG00000001395) #11	CCDC113 (ENSSCUG00000001394) #12	CSNK2A2 (ENSSCUG00000001392) #14	CFAP20 (ENSSCUG00000001390) #15	MMP15 (ENSSCUG00000001389) #16	USB1 (ENSSCUG00000001387) #17	ZNF319 (ENSSCUG00000001386)	ENSSCUG00000001385	KIFC3 (ENSSCUG00000001381) #22	KATNB1 (ENSSCUG00000001375) #23	DRC7 (ENSSCUG00000001367) #24	ENSSCUG00000001361	ADGRG3 (ENSSCUG00000001358) #25	ADGRG1 (ENSSCUG00000001355) #26	ADGRG5 (ENSSCUG00000001351) #27	CCDC102A (ENSSCUG00000001350) #28	POLR2C (ENSSCUG00000001347) #30	COQ9 (ENSSCUG00000001344) #31	CIAPIN1 (ENSSCUG00000001341) #32
Australian saltwater crocodile	MODERN SPECIES	35	PRMT7 (ENSCPRG00005015109)	SLC7A6OS (ENSCPRG00005015116)	SLC7A6 (ENSCPRG00005015121)	CSNK2A2 (ENSCPRG00005015129) #14	CFAP20 (ENSCPRG00005015139) #15	ENSCPRG00005015147 ##14	DGAT1 (ENSCPRG00005015170)	ENSCPRG00005015242	ENSCPRG00005015244	MMP15 (ENSCPRG00005015248) #16	USB1 (ENSCPRG00005015254) #17	ZNF319 (ENSCPRG00005015259)	TEPP (ENSCPRG00005015265) #18	ENSCPRG00005015288	ENSCPRG00005015293	KIFC3 (ENSCPRG00005015296) #22	KATNB1 (ENSCPRG00005015307) #23	DRC7 (ENSCPRG00005015311) #24	ENSCPRG00005015330	ADGRG3 (ENSCPRG00005015336) #25	ADGRG1 (ENSCPRG00005015343) #26	CCDC102A (ENSCPRG00005015349) #28	DOK4 (ENSCPRG00005015352) #29	POLR2C (ENSCPRG00005015356) #30	COQ9 (ENSCPRG00005015362) #31	CIAPIN1 (ENSCPRG00005015366) #32	ENSCPRG00005015379	NUTF2 (ENSCPRG00005015425)	EDC4 (ENSCPRG00005015510)	NRN1L (ENSCPRG00005015858)	ENSCPRG00005000064
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000161897	ENSGT00390000018422	ENSGT00940000156930	ENSGT00940000163790	ENSGT00390000016546	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894
Emydidae	ANCESTRAL SPECIES	33	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653
Three-toed box turtle	MODERN SPECIES	60	CNOT1 (ENSTMTG00000004594) #7	SETD6 (ENSTMTG00000000079) #8	NDRG4 (ENSTMTG00000000116) #9	ENSTMTG00000000143	GINS3 (ENSTMTG00000000167) #10	ENSTMTG00000000248	PRSS54 (ENSTMTG00000000406) #11	ENSTMTG00000000481	CSNK2A2 (ENSTMTG00000000503) #14	CFAP20 (ENSTMTG00000000536) #15	MMP15 (ENSTMTG00000000556) #16	USB1 (ENSTMTG00000000581) #17	ZNF319 (ENSTMTG00000000594)	TEPP (ENSTMTG00000000624) #18	CNGB1 (ENSTMTG00000000672) #20	KIFC3 (ENSTMTG00000000720) #22	KATNB1 (ENSTMTG00000000737) #23	DRC7 (ENSTMTG00000000771) #24	ENSTMTG00000001008	ADGRG3 (ENSTMTG00000001030) #25	ADGRG5 (ENSTMTG00000001046) #27	CCDC102A (ENSTMTG00000001067) #28	DOK4 (ENSTMTG00000001102) #29	POLR2C (ENSTMTG00000001119) #30	COQ9 (ENSTMTG00000001141) #31	CIAPIN1 (ENSTMTG00000001156) #32	PLLP (ENSTMTG00000001172)	ARL2BP (ENSTMTG00000001185)	RSPRY1 (ENSTMTG00000001200)	PSME3IP1 (ENSTMTG00000001224)	CPNE2 (ENSTMTG00000001233)
painted turtle	MODERN SPECIES	910	CNOT1 (ENSCPBG00000026222) #7	SETD6 (ENSCPBG00000026911) #8	NDRG4 (ENSCPBG00000026914) #9	GINS3 (ENSCPBG00000026918) #10	ENSCPBG00000026920	ENSCPBG00000026922 #11	CCDC113 (ENSCPBG00000026925) #12	CSNK2A2 (ENSCPBG00000026931) #14	CFAP20 (ENSCPBG00000026938) #15	ENSCPBG00000026940	MMP15 (ENSCPBG00000026942) #16	USB1 (ENSCPBG00000026943) #17	ZNF319 (ENSCPBG00000026947)	TEPP (ENSCPBG00000026948) #18	CNGB1 (ENSCPBG00000026952) #20	KIFC3 (ENSCPBG00000026957) #22	KATNB1 (ENSCPBG00000026959) #23	DRC7 (ENSCPBG00000026962) #24	ENSCPBG00000026968	ADGRG3 (ENSCPBG00000026970) #25	ENSCPBG00000026971	PLEKHG7 (ENSCPBG00000026973)	EEA1 (ENSCPBG00000026976)	ENSCPBG00000026977
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000170299	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894
Goode s thornscrub tortoise	MODERN SPECIES	3	SLC38A7 (ENSGEVG00005005271)	CNOT1 (ENSGEVG00005005342) #7	SETD6 (ENSGEVG00005005565) #8	NDRG4 (ENSGEVG00005005623) #9	ENSGEVG00005005676	GINS3 (ENSGEVG00005005699) #10	PRSS54 (ENSGEVG00005005721) #11	ENSGEVG00005005753	CSNK2A2 (ENSGEVG00005005788) #14	CFAP20 (ENSGEVG00005005824) #15	MMP15 (ENSGEVG00005005854) #16	USB1 (ENSGEVG00005005882) #17	ZNF319 (ENSGEVG00005005903)	TEPP (ENSGEVG00005005971) #18	ENSGEVG00005006239	KIFC3 (ENSGEVG00005006374) #22	KATNB1 (ENSGEVG00005006492) #23	DRC7 (ENSGEVG00005006575) #24	ENSGEVG00005006857	ADGRG3 (ENSGEVG00005006926) #25	ADGRG1 (ENSGEVG00005006971) #26	ADGRG5 (ENSGEVG00005006994) #27	CCDC102A (ENSGEVG00005007038) #28	ENSGEVG00005007085 #29	POLR2C (ENSGEVG00005007127) #30	ENSGEVG00005007159 #31	CIAPIN1 (ENSGEVG00005007200) #32	ENSGEVG00005007301 #29	ENSGEVG00005007393 #31	ENSGEVG00005007447	ENSGEVG00005007462
Abingdon island giant tortoise	MODERN SPECIES	82		CNOT1 (ENSCABG00000021278) #7	SETD6 (ENSCABG00000021206) #8	NDRG4 (ENSCABG00000021204) #9	ENSCABG00000021203	GINS3 (ENSCABG00000021202) #10	ENSCABG00000021201 #11	ENSCABG00000021200	CSNK2A2 (ENSCABG00000021184) #14	CFAP20 (ENSCABG00000021181) #15	MMP15 (ENSCABG00000021180) #16	USB1 (ENSCABG00000021178) #17	ZNF319 (ENSCABG00000021177)	TEPP (ENSCABG00000021176) #18	ENSCABG00000021172	KIFC3 (ENSCABG00000021171) #22	KATNB1 (ENSCABG00000020876) #23	DRC7 (ENSCABG00000020851) #24	ENSCABG00000020841	ADGRG3 (ENSCABG00000020837) #25	ADGRG1 (ENSCABG00000020822) #26	ADGRG5 (ENSCABG00000020815) #27	CCDC102A (ENSCABG00000020811) #28	DOK4 (ENSCABG00000020806) #29	POLR2C (ENSCABG00000020799) #30	COQ9 (ENSCABG00000020793) #31	CIAPIN1 (ENSCABG00000020791) #32	ENSCABG00000020789	ENSCABG00000020788
Chinese turtle	MODERN SPECIES	1440	SETD6 (ENSPSIG00000005364) #8	NDRG4 (ENSPSIG00000004943) #9	GINS3 (ENSPSIG00000004900) #10	ENSPSIG00000004852	PRSS54 (ENSPSIG00000004764) #11	CCDC113 (ENSPSIG00000004709) #12	ENSPSIG00000001769	CSNK2A2 (ENSPSIG00000004450) #14	CFAP20 (ENSPSIG00000004443) #15	MMP15 (ENSPSIG00000004327) #16	USB1 (ENSPSIG00000004305) #17	ZNF319 (ENSPSIG00000004303)	ENSPSIG00000004302	TEPP (ENSPSIG00000004211) #18	CNGB1 (ENSPSIG00000003960) #20	KIFC3 (ENSPSIG00000003804) #22	KATNB1 (ENSPSIG00000014651) #23	ENSPSIG00000001766
Lepidosauria	ANCESTRAL SPECIES	63	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b	ENSGT00940000154285.b.b #25	ENSGT00940000160843 #26	ENSGT00940000161359 #27	ENSGT00730000110960.a.a #28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00940000163363.e.a.a.a.a	ENSGT00940000159189	ENSGT00940000165568	ENSGT00950000183008.a.b
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00950000185219	ENSGT00390000001622 #10	ENSGT00950000185282	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000003210	ENSGT00940000160407	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483	ENSGT00940000159082
Laterata	ANCESTRAL SPECIES	19	ENSGT00940000167871	ENSGT00390000014869 #7	ENSGT00940000153577.C #8	ENSGT00950000182872.f.b.a #9	ENSGT00390000001622 #10	ENSGT00950000185282	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000160407	ENSGT00390000003210	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483	ENSGT00940000159082
Common wall lizard	MODERN SPECIES	16	GOT2 (ENSPMRG00000021268)	SLC38A7 (ENSPMRG00000021261)	ENSPMRG00000021246	CNOT1 (ENSPMRG00000021154) #7	SETD6 (ENSPMRG00000021119) #8	NDRG4 (ENSPMRG00000020749) #9	GINS3 (ENSPMRG00000020657) #10	PRSS54 (ENSPMRG00000020647) #11	CCDC113 (ENSPMRG00000020635) #12	CSNK2A2 (ENSPMRG00000020610) #14	CFAP20 (ENSPMRG00000020598) #15	MMP15 (ENSPMRG00000020590) #16	USB1 (ENSPMRG00000020546) #17	ZNF319 (ENSPMRG00000020531)	TEPP (ENSPMRG00000020520) #18	KIFC3 (ENSPMRG00000020481) #22	KATNB1 (ENSPMRG00000020176) #23	SS18L2 (ENSPMRG00000020124)	GARRE1 (ENSPMRG00000020117)	GPI (ENSPMRG00000020107)	WTIP (ENSPMRG00000020092)	UBA2 (ENSPMRG00000020079)	PDCD2L (ENSPMRG00000020060)	LSM14A (ENSPMRG00000020045)	ENSPMRG00000020036	ENSPMRG00000020032	KCTD15 (ENSPMRG00000020026)	CHST8 (ENSPMRG00000020015)	PEPD (ENSPMRG00000019984)	CEBPG (ENSPMRG00000019974)	ENSPMRG00000019970
Argentine black and white tegu	MODERN SPECIES	57	GOT2 (ENSSMRG00000002281)	SLC38A7 (ENSSMRG00000002274)	ENSSMRG00000002239	CNOT1 (ENSSMRG00000002227) #7	SETD6 (ENSSMRG00000002215) #8	NDRG4 (ENSSMRG00000002171) #9	ENSSMRG00000002164	PRSS54 (ENSSMRG00000002145) #11	CCDC113 (ENSSMRG00000002136) #12	CSNK2A2 (ENSSMRG00000002129) #14	CFAP20 (ENSSMRG00000002125) #15	MMP15 (ENSSMRG00000002113) #16	ZNF319 (ENSSMRG00000002112)	TEPP (ENSSMRG00000001829) #18	ENSSMRG00000001807	KIFC3 (ENSSMRG00000001793) #22	KATNB1 (ENSSMRG00000001790) #23	SS18L2 (ENSSMRG00000001782)	GARRE1 (ENSSMRG00000001774)	ENSSMRG00000001763	GPI (ENSSMRG00000001752)	WTIP (ENSSMRG00000001746)	UBA2 (ENSSMRG00000001739)	PDCD2L (ENSSMRG00000001735)	LSM14A (ENSSMRG00000001721)	KCTD15 (ENSSMRG00000001715)	CHST8 (ENSSMRG00000001685)	PEPD (ENSSMRG00000001671)	CEBPG (ENSSMRG00000001658)	CEBPA (ENSSMRG00000001653)	ENSSMRG00000001645
Toxicofera	ANCESTRAL SPECIES	37						ENSGT00950000185282	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939 #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000003210	ENSGT00940000160407	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483	ENSGT00940000159082
Elapidae	ANCESTRAL SPECIES	26	ENSGT00940000155200.d.b	ENSGT00940000158136	ENSGT00950000183082.a	ENSGT00960000186694	ENSGT00390000008765	ENSGT00940000155200.d.a	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939.c #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000003210	ENSGT00940000160407	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483	ENSGT00940000159082
Elapidae_a	ANCESTRAL SPECIES	45	ENSGT00940000158136	ENSGT00950000183082.a	ENSGT00960000186694	ENSGT00390000008765	ENSGT00940000155200.d.a	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939.c #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000160407	ENSGT00390000003210.k	ENSGT00390000003210.l	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483
Acanthophiinae	ANCESTRAL SPECIES	43	ENSGT00940000155200.d.b	ENSGT00940000158136	ENSGT00950000183082.a	ENSGT00390000008765	ENSGT00940000155200.d.a	ENSGT01020000230389.a.a.b #11	ENSGT00940000154521.B #12	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00390000004554 #15	ENSGT00940000156939.c #16	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154824.b #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000160407	ENSGT00390000003210.k	ENSGT00390000003210.l	ENSGT00390000000707	ENSGT00940000160924	ENSGT00550000074924	ENSGT00940000158339	ENSGT00940000154415	ENSGT00940000159496.d	ENSGT00940000159100	ENSGT00940000153657.B	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000165483
Eastern brown snake	MODERN SPECIES	69	CIAO2B (ENSPTXG00000007017)	ENSPTXG00000007016	SLC38A7 (ENSPTXG00000007015)	GOT2 (ENSPTXG00000007014)	ENSPTXG00000007009	ENSPTXG00000007008	PRSS54 (ENSPTXG00000007007) #11	CCDC113 (ENSPTXG00000007005) #12	CSNK2A2 (ENSPTXG00000007004) #14	CFAP20 (ENSPTXG00000007003) #15	MMP15 (ENSPTXG00000007002) #16	USB1 (ENSPTXG00000007001) #17	ZNF319 (ENSPTXG00000007000)	TEPP (ENSPTXG00000006999) #18	CNGB1 (ENSPTXG00000006830) #20	KIFC3 (ENSPTXG00000006817) #22	KATNB1 (ENSPTXG00000006772) #23	SS18L2 (ENSPTXG00000006771)	GARRE1 (ENSPTXG00000006770)	WTIP (ENSPTXG00000006768)	UBA2 (ENSPTXG00000006767)	PDCD2L (ENSPTXG00000006765)	LSM14A (ENSPTXG00000006764)	ENSPTXG00000006763	CHST8 (ENSPTXG00000006762)	PEPD (ENSPTXG00000006758)	CEBPG (ENSPTXG00000006756)	CEBPA (ENSPTXG00000006754)	ENSPTXG00000006744	ENSPTXG00000006743	PDPR (ENSPTXG00000006742)
Mainland tiger snake	MODERN SPECIES	765																KIFC3 (ENSNSUG00000003294) #22	KATNB1 (ENSNSUG00000002753) #23	ENSNSUG00000002747
Blue-lipped sea krait	MODERN SPECIES	4873															CNGB1 (ENSLLTG00000013788) #20	KIFC3 (ENSLLTG00000013742) #22	KATNB1 (ENSLLTG00000013681) #23	SS18L2 (ENSLLTG00000013667)	ENSLLTG00000013657
Indian cobra	MODERN SPECIES	12	CIAO2B (ENSNNAG00000003923)	ENSNNAG00000003942	SLC38A7 (ENSNNAG00000004017)	GOT2 (ENSNNAG00000004049)	ENSNNAG00000004080	ENSNNAG00000004115	PRSS54 (ENSNNAG00000004161) #11	CCDC113 (ENSNNAG00000004209) #12	CSNK2A2 (ENSNNAG00000004255) #14	CFAP20 (ENSNNAG00000004284) #15	MMP15 (ENSNNAG00000004311) #16	USB1 (ENSNNAG00000004349) #17	ZNF319 (ENSNNAG00000004368)	TEPP (ENSNNAG00000004415) #18	CNGB1 (ENSNNAG00000004636) #20	KIFC3 (ENSNNAG00000004991) #22	GARRE1 (ENSNNAG00000005126)	SS18L2 (ENSNNAG00000005229)	GPI (ENSNNAG00000005274)	WTIP (ENSNNAG00000005448)	UBA2 (ENSNNAG00000005482)	PDCD2L (ENSNNAG00000005525)	LSM14A (ENSNNAG00000005547)	KCTD15 (ENSNNAG00000005586)	CHST8 (ENSNNAG00000005620)	PEPD (ENSNNAG00000005634)	CEBPG (ENSNNAG00000005702)	CEBPA (ENSNNAG00000005712)	ENSNNAG00000005724	PDPR (ENSNNAG00000005758)	GLG1 (ENSNNAG00000005866)
Lizard	MODERN SPECIES	14																ENSACAG00000007570 #22
tuatara	MODERN SPECIES	931									GINS3 (ENSSPUG00000006633) #10	CCDC113 (ENSSPUG00000006647) #12	CSNK2A2 (ENSSPUG00000006683) #14	CFAP20 (ENSSPUG00000006705) #15	USB1 (ENSSPUG00000006741) #17	TEPP (ENSSPUG00000006789) #18	CNGB1 (ENSSPUG00000006956) #20	KIFC3 (ENSSPUG00000007380) #22	KATNB1 (ENSSPUG00000007498) #23	DRC7 (ENSSPUG00000007520) #24	ENSSPUG00000007537 #25	ADGRG1 (ENSSPUG00000007544) #26	ADGRG5 (ENSSPUG00000007587) #27
Anura	ANCESTRAL SPECIES	64	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT00950000183082.a	ENSGT00940000158136	ENSGT00390000014869 #7	ENSGT00940000156939 #16	ENSGT00390000004215.a.b.b.c.a #14	ENSGT00940000154521.B #12	ENSGT00390000001622 #10	ENSGT00950000182872.f.b.a #9	ENSGT00940000153577.C #8	ENSGT00390000004596 #17	ENSGT00940000160309	ENSGT00390000013928 #18	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000004913 #24	ENSGT00940000156038.b.a	ENSGT00940000160843 #26	ENSGT00730000110960.a.b ##28	ENSGT00940000160143 #29	ENSGT00950000183100.A #30	ENSGT00390000009328 #31	ENSGT00390000011417 #32	ENSGT00390000004417.b	ENSGT01030000234613.a.b	ENSGT00390000008749.f	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252
Frog	MODERN SPECIES	4	calb2 (ENSXETG00000040382)	shtn1 (ENSXETG00000015896)	slc38a7 (ENSXETG00000015897)	cnot1 (ENSXETG00000015900) #7	ENSXETG00000046418	mmp15 (ENSXETG00000025032) #16	csnk2a2 (ENSXETG00000013728) #14	ccdc113 (ENSXETG00000048150) #12	ENSXETG00000041906	gins3 (ENSXETG00000013741) #10	ndrg4 (ENSXETG00000013742) #9	znf319 (ENSXETG00000013744)	tepp (ENSXETG00000035867) #18	ENSXETG00000043752	ENSXETG00000049283	kifc3 (ENSXETG00000013755) #22	katnb1 (ENSXETG00000025041) #23	drc7 (ENSXETG00000013759) #24	zpd (ENSXETG00000013767)	ADGRG1 (ENSXETG00000013764) #26	ccdc102a (ENSXETG00000013779) ##28	dok4 (ENSXETG00000013782) #29	polr2c (ENSXETG00000013784) #30	coq9 (ENSXETG00000025042) #31	ciapin1 (ENSXETG00000013788) #32	setd6 (ENSXETG00000013793) #8	usb1 (ENSXETG00000013795) #17	kiaa0895l (ENSXETG00000013796)	exoc3l1 (ENSXETG00000013799)	anln (ENSXETG00000039411)	tmem208 (ENSXETG00000033520)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	3948																ENSLACG00000000772 #22
Coelacanth	MODERN SPECIES	1700													ENSLACG00000010472 #16	CNGB1 (ENSLACG00000006053) #20	ENSLACG00000005830	ENSLACG00000003036 #22	KATNB1 (ENSLACG00000000475) #23
Actinopterygii	ANCESTRAL SPECIES	13	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00940000164020	ENSGT00770000121709	ENSGT00950000183156.a.b.a	ENSGT00390000008385	ENSGT00940000160143 #29	ENSGT00730000110960.b ##28	ENSGT00940000154285.b.a.a.b ##25	ENSGT00970000197355	ENSGT00940000158295	ENSGT00390000015672	ENSGT00940000167365	ENSGT00940000156939 #16	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455
Neopterygii	ANCESTRAL SPECIES	22	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00940000164020	ENSGT00770000121709	ENSGT00950000183156.a.b.a	ENSGT00390000008385	ENSGT00940000160143 #29	ENSGT00730000110960.b ##28	ENSGT00940000154285.b.a.a.b ##25	ENSGT00940000156113	ENSGT00940000158295	ENSGT00390000015672	ENSGT00940000167365	ENSGT00940000156939 #16	ENSGT00940000162283	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT00940000163301.c.b	ENSGT00940000163301.c.a	ENSGT00940000153577.C #8	ENSGT00390000014869 #7	ENSGT00880000138014.a	ENSGT00940000158136	ENSGT00940000158945	ENSGT00630000089910	ENSGT00940000154294	ENSGT00950000183082.a
Osteoglossocephalai	ANCESTRAL SPECIES		ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00940000164020	ENSGT00950000183156.a.a	ENSGT00390000008385	ENSGT00940000160143 #29	ENSGT00730000110960.b ##28	ENSGT00940000154285.b.a.a.b ##25	ENSGT00940000156113	ENSGT00940000158295	ENSGT00390000015672	ENSGT00940000167365	ENSGT00940000156939 #16	ENSGT00940000162283.a	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT00940000163301.c.b	ENSGT00940000163301.c.a	ENSGT00940000153577.C #8	ENSGT00390000014869 #7	ENSGT00880000138014.a	ENSGT00940000158136	ENSGT00990000203851	ENSGT00950000183082.a	ENSGT00950000183108.b.a.a.i.b	ENSGT00950000182991.A.a.c.b
Clupeocephala	ANCESTRAL SPECIES	16	ENSGT00390000013260.A.a	ENSGT00940000165480.b	ENSGT00940000165480.a	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00940000163723.A.f.b	ENSGT00940000163723.A.e	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000008139	ENSGT00940000156252.pb.b	ENSGT00880000138014.a	ENSGT00940000158136	ENSGT00990000203752	ENSGT00940000161773
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00390000013260.A.a	ENSGT00940000165480.b	ENSGT00940000165480.a	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00940000163723.A.f.b	ENSGT00940000163723.A.e	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b
Clupeiformes	ANCESTRAL SPECIES	160	ENSGT00390000013260.A.a	ENSGT00940000165480.b	ENSGT00940000165480.a	ENSGT00730000111007.a.b	ENSGT00940000164361.a	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00940000163723.A.f.b	ENSGT00940000163723.A.e	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000017491	ENSGT00940000155817.a.a	ENSGT00940000156433.A	ENSGT00940000156267.ob.a.a	ENSGT00940000158305	ENSGT00940000159336
Atlantic herring	MODERN SPECIES	22	ENSCHAG00000010328	ENSCHAG00000010344	ENSCHAG00000010352	ENSCHAG00000010370	ENSCHAG00000010556	ENSCHAG00000010585	CTTN (ENSCHAG00000011070)	ENSCHAG00000013262	ppfia1 (ENSCHAG00000013547)	ENSCHAG00000022255	arfgap2 (ENSCHAG00000022309)	ENSCHAG00000022581	pex16 (ENSCHAG00000022595)	large2 (ENSCHAG00000022634)	ENSCHAG00000023099	KIFC3 (ENSCHAG00000023121) #22	wt1b (ENSCHAG00000023341)	eif3m (ENSCHAG00000023358)	prrg4 (ENSCHAG00000023387)	QSER1 (ENSCHAG00000023395)	depdc7a (ENSCHAG00000023431)	cstf3 (ENSCHAG00000023488)	rps13 (ENSCHAG00000024029)	PLEKHA7 (ENSCHAG00000024081)	sox6 (ENSCHAG00000024518)	PDE3B (ENSCHAG00000024777)	PHLPP2 (ENSCHAG00000024816)	marveld3 (ENSCHAG00000024864)	ENSCHAG00000024908	CRISPLD2 (ENSCHAG00000025641)	ENSCHAG00000025733
Denticle herring	MODERN SPECIES	7	eif3m (ENSDCDG00000006102)	wt1b (ENSDCDG00000005959)	ENSDCDG00000005819	acte1 (ENSDCDG00000005628)	ENSDCDG00000035717	CTTN (ENSDCDG00000035695)	ppfia1 (ENSDCDG00000035452)	ENSDCDG00000035387	ENSDCDG00000035386	arfgap2 (ENSDCDG00000035382)	ENSDCDG00000035380	pex16 (ENSDCDG00000035379)	ENSDCDG00000035378	large2 (ENSDCDG00000035347)	ENSDCDG00000035236	KIFC3 (ENSDCDG00000035185) #22	ENSDCDG00000035177	guca1g (ENSDCDG00000035172)	ENSDCDG00000035170	ENSDCDG00000035168	chst1 (ENSDCDG00000035167)	slc35c1 (ENSDCDG00000035166)	CRY2 (ENSDCDG00000035147)	MAPK8IP1 (ENSDCDG00000035135)	lrp4 (ENSDCDG00000034874)	ENSDCDG00000034835	NELL1 (ENSDCDG00000034058)	slc6a5 (ENSDCDG00000033969)	prmt3 (ENSDCDG00000033958)	AP2A2 (ENSDCDG00000033915)	cd151l (ENSDCDG00000033905)
Otophysi	ANCESTRAL SPECIES	134											ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053
Characiphysae	ANCESTRAL SPECIES	66	ENSGT00940000161494	ENSGT00940000160518	ENSGT00940000174677	ENSGT00940000159183	ENSGT00390000003107.b.j	ENSGT00940000158292.b	ENSGT00940000166238.a	ENSGT00940000156119	ENSGT00510000046760.a.ab	ENSGT00390000013786	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053
Channel catfish	MODERN SPECIES	23	c4h19orf47 (ENSIPUG00000012092)	ttc9b (ENSIPUG00000012108)	map3k10 (ENSIPUG00000012119)	sipa1l3 (ENSIPUG00000012143)	qpctla (ENSIPUG00000012203)	six9 (ENSIPUG00000012212)	six5 (ENSIPUG00000012233)	tbcb (ENSIPUG00000012250)	yap1 (ENSIPUG00000012368)	cep126 (ENSIPUG00000012388)	arfgap2 (ENSIPUG00000012424)	ENSIPUG00000012466	pex16 (ENSIPUG00000012495)	large2 (ENSIPUG00000012569)	ENSIPUG00000012677	kifc3 (ENSIPUG00000012716) #22	wt1b (ENSIPUG00000012895)	eif3m (ENSIPUG00000012938)	prrg4 (ENSIPUG00000013041)	qser1 (ENSIPUG00000013066)	depdc7 (ENSIPUG00000013087)	CSTF3 (ENSIPUG00000013170)	rpl35a (ENSIPUG00000013354)	abcc5 (ENSIPUG00000013413)	RNPEPL1 (ENSIPUG00000013502)	DVL3 (ENSIPUG00000013533)	ap2m1a (ENSIPUG00000013572)	mmp23bb (ENSIPUG00000013671)	ENSIPUG00000013734 #24	pcyt1ab (ENSIPUG00000013777)	mtif2 (ENSIPUG00000013801)
Characiphysae_b	ANCESTRAL SPECIES	72	ENSGT00940000161494	ENSGT00940000160518	ENSGT00940000174677	ENSGT00940000159183	ENSGT00390000003107.b.j	ENSGT00940000158292.b	ENSGT00940000166238.a	ENSGT00940000156119	ENSGT00510000046760.a.ab	ENSGT00390000013786	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053
Characoidei	ANCESTRAL SPECIES	76	ENSGT00940000161494	ENSGT00940000160518	ENSGT00940000174677	ENSGT00940000159183	ENSGT00390000003107.b.j	ENSGT00940000158292.b	ENSGT00940000166238.a	ENSGT00940000156119	ENSGT00510000046760.a.ab	ENSGT00390000013786	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053
Red-bellied piranha	MODERN SPECIES	135	MAP3K10 (ENSPNAG00000019349)	ENSPNAG00000019365	SIPA1L3 (ENSPNAG00000019408)	qpctla (ENSPNAG00000019429)	six9 (ENSPNAG00000019447)	six5 (ENSPNAG00000019453)	tbcb (ENSPNAG00000019461)	yap1 (ENSPNAG00000019515)	ENSPNAG00000019548	arfgap2 (ENSPNAG00000019585)	ENSPNAG00000019630	pex16 (ENSPNAG00000019643)	ENSPNAG00000019654	large2 (ENSPNAG00000003607)	ENSPNAG00000019835	KIFC3 (ENSPNAG00000019956) #22	wt1b (ENSPNAG00000019996)	eif3m (ENSPNAG00000020059)	prrg4 (ENSPNAG00000020078)	QSER1 (ENSPNAG00000020097)	depdc7a (ENSPNAG00000020112)	cstf3 (ENSPNAG00000020182)	rpl35a (ENSPNAG00000020201)	abcc5 (ENSPNAG00000020320)	rnpepl1 (ENSPNAG00000020382)	DVL3 (ENSPNAG00000020417)	ENSPNAG00000020449	ENSPNAG00000020471
Mexicana tetra	MODERN SPECIES	115									ENSAMXG00000031175	arfgap2 (ENSAMXG00000043447)	ENSAMXG00000001348	pex16 (ENSAMXG00000008446)	large2 (ENSAMXG00000017259)	ENSAMXG00000036966	ENSAMXG00000014344	KIFC3 (ENSAMXG00000014323) #22	wt1b (ENSAMXG00000039805)	eif3m (ENSAMXG00000014287)	prrg4 (ENSAMXG00000032262)	QSER1 (ENSAMXG00000036761)	depdc7a (ENSAMXG00000043313)	cstf3 (ENSAMXG00000014198)	rpl35a (ENSAMXG00000041448)	ENSAMXG00000041419	abcc5 (ENSAMXG00000014147)	rnpepl1 (ENSAMXG00000029654)	ENSAMXG00000031190	DVL3 (ENSAMXG00000014040)	ap2m1b (ENSAMXG00000014011)	mmp23bb (ENSAMXG00000032267)	pcyt1ab (ENSAMXG00000013963)
Electric eel	MODERN SPECIES	1041															ENSEEEG00000012406	KIFC3 (ENSEEEG00000012424) #22
Cyprinoidei	ANCESTRAL SPECIES	12	ENSGT00940000161445	ENSGT00390000014682	ENSGT00940000159112.b	ENSGT00940000159256.o	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00950000182942.b.f.a	ENSGT00940000158035	ENSGT00390000010215.B	ENSGT00550000074936	ENSGT00940000155568	ENSGT00940000165402	ENSGT00390000017790	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000156734.b	ENSGT00390000004456	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b.d	ENSGT00390000006758.b	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000156343.lb.a	ENSGT00940000166911
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	282															ENSGT00940000154824.f #20	ENSGT00940000154022.a.a.c #22	ENSGT00940000156734.b.a	ENSGT00390000004456.f	ENSGT00940000158268.a.g	ENSGT00440000037417.A.c	ENSGT00950000182976.a.b.d.c	ENSGT00390000006758.a.a.a	ENSGT00390000016972.k	ENSGT00940000155470.b.a	ENSGT00940000160400.f	ENSGT00390000006758.a.a.b	ENSGT00390000016972.l	ENSGT00940000155470.b.b	ENSGT00940000160400.e	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c.a
Goldfish	MODERN SPECIES	37	rnf7 (ENSCARG00000069001)	ENSCARG00000069007	fzd9b (ENSCARG00000069015)	baz1b (ENSCARG00000069049)	bcl7bb (ENSCARG00000069207)	tsen34 (ENSCARG00000069209)	selenot1b (ENSCARG00000069211)	ccnl1a (ENSCARG00000069231)	ankrd67 (ENSCARG00000069293)	veph1 (ENSCARG00000069300)	PTX3 (ENSCARG00000069343)	ENSCARG00000069350	trip12 (ENSCARG00000054246)	ENSCARG00000061780	RASA2 (ENSCARG00000061827)	KIFC3 (ENSCARG00000062826) #22	wt1b (ENSCARG00000063375)	prrg4 (ENSCARG00000063582)	QSER1 (ENSCARG00000063600)	depdc7a (ENSCARG00000063648)	cstf3 (ENSCARG00000063741)	rpl35a (ENSCARG00000065008)	abcc5 (ENSCARG00000065054)	rnpepl1 (ENSCARG00000065448)	DVL3 (ENSCARG00000065565)	ap2m1b (ENSCARG00000065829)	mmp23bb (ENSCARG00000065840)	pcyt1ab (ENSCARG00000065863)	SPTBN4 (ENSCARG00000065933)	ENSCARG00000066127	blvrb (ENSCARG00000066139)
Cyprininae_a	ANCESTRAL SPECIES	105	ENSGT00390000014682.y	ENSGT00940000159112.b.m	ENSGT00940000159256.o.p.a	ENSGT00390000005826.a.a.k.a	ENSGT00940000161895.d	ENSGT01100000263571.i.a.b.g.b	ENSGT00950000182942.b.f.a.d	ENSGT00940000158035.d	ENSGT00390000010215.B.m	ENSGT00550000074936.g	ENSGT00940000155568.m.a	ENSGT00940000165402	ENSGT00390000017790.b	ENSGT00940000158758.h	ENSGT00940000154824.f #20	ENSGT00940000154022.a.a.c #22	ENSGT00940000156734.b.a	ENSGT00390000004456.f	ENSGT00940000158268.a.g	ENSGT00440000037417.A.c	ENSGT00950000182976.a.b.d.c	ENSGT00390000006758.a.a.a	ENSGT00940000155470.b.a	ENSGT00940000160400.f	ENSGT00940000160400.e	ENSGT00950000182903.a.a.c.c	ENSGT00940000159223.c.a	ENSGT00940000165683.b	ENSGT00940000157384.b.a	ENSGT00940000156343.lb.a.f	ENSGT00390000014810.a.a.a
Common carp reference	MODERN SPECIES	9	ehd2b (ENSCCRG00000037630)	napab (ENSCCRG00000037649)	ENSCCRG00000053687	ENSCCRG00000052859	ENSCCRG00000019429	ENSCCRG00000078610	ilvbl (ENSCCRG00000063266)	ENSCCRG00000001894	ENSCCRG00000001887	arfgap2 (ENSCCRG00000001781)	ENSCCRG00000061590	pex16 (ENSCCRG00000041455)	large2 (ENSCCRG00000040106)	ENSCCRG00000051238 #20	ENSCCRG00000036195	ENSCCRG00000031646 #22	wt1b (ENSCCRG00000066394)	eif3m (ENSCCRG00000069231)	prrg4 (ENSCCRG00000060010)	QSER1 (ENSCCRG00000036172)	depdc7a (ENSCCRG00000036181)	ENSCCRG00000071202	abcc5 (ENSCCRG00000009261)	rnpepl1 (ENSCCRG00000015841)	ENSCCRG00000003021	ap2m1b (ENSCCRG00000079718)	mmp23bb (ENSCCRG00000078976)	pcyt1ab (ENSCCRG00000065713)	ENSCCRG00000012619	ENSCCRG00000056362	blvrb (ENSCCRG00000034183)
Cyprininae	ANCESTRAL SPECIES	78	ENSGT00950000182942.b.f.a.d	ENSGT00940000158035.d	ENSGT00390000010215.B.m	ENSGT00550000074936.g	ENSGT00940000155568.m.a	ENSGT00940000165402	ENSGT00950000182942.b.f.a.c	ENSGT00940000158035.c	ENSGT00390000010215.B.n	ENSGT00550000074936.h	ENSGT00940000155568.n	ENSGT00940000163443.m.a.b	ENSGT00390000017790.a	ENSGT00940000158758.g	ENSGT00940000162283.b	ENSGT00940000154022.a.a.d #22	ENSGT00940000156734.b.b	ENSGT00390000004456.e	ENSGT00940000158268.a.h	ENSGT00440000037417.A.d	ENSGT00950000182976.a.b.d.d
Cyprininae_a	ANCESTRAL SPECIES	225	ENSGT00390000014682.z	ENSGT00940000159112.b.n	ENSGT00940000159256.o.p.b	ENSGT00390000005826.a.a.k.b	ENSGT00940000161895.c	ENSGT01100000263571.i.a.b.g.a	ENSGT00950000182942.b.f.a.c	ENSGT00940000158035.c	ENSGT00390000010215.B.n	ENSGT00550000074936.h	ENSGT00940000155568.n	ENSGT00940000163443.m.a.b	ENSGT00390000017790.a	ENSGT00940000158758.g	ENSGT00940000162283.b	ENSGT00940000154022.a.a.d #22	ENSGT00940000156734.b.b	ENSGT00390000004456.e	ENSGT00940000158268.a.h	ENSGT00440000037417.A.d	ENSGT00950000182976.a.b.d.d	ENSGT00390000006758.a.a.b	ENSGT00390000016972.l	ENSGT00940000155470.b.b	ENSGT00950000182903.a.a.c.d	ENSGT00940000159223.c.b	ENSGT00940000165683.a	ENSGT00940000157384.b.b	ENSGT00940000156343.lb.a.e	ENSGT00390000014810.a.a.b	ENSGT01030000235127.a
Common carp reference	MODERN SPECIES	19	napab (ENSCCRG00000038620)	ENSCCRG00000067774	ENSCCRG00000060344	ENSCCRG00000061302	ENSCCRG00000006131	ENSCCRG00000006122	ilvbl (ENSCCRG00000073030)	ENSCCRG00000000204	ENSCCRG00000070721	arfgap2 (ENSCCRG00000041340)	ENSCCRG00000019217	pex16 (ENSCCRG00000001711)	large2 (ENSCCRG00000040424)	ENSCCRG00000069795	ENSCCRG00000059269	ENSCCRG00000023751 #22	wt1b (ENSCCRG00000031969)	eif3m (ENSCCRG00000032797)	prrg4 (ENSCCRG00000032828)	QSER1 (ENSCCRG00000032832)	depdc7a (ENSCCRG00000032837)	cstf3 (ENSCCRG00000032865)	rpl35a (ENSCCRG00000009315)	abcc5 (ENSCCRG00000053693)	rnpepl1 (ENSCCRG00000020950)	ENSCCRG00000023207	ap2m1b (ENSCCRG00000001037)	mmp23bb (ENSCCRG00000072975)	pcyt1ab (ENSCCRG00000024722)	ENSCCRG00000033338	blvrb (ENSCCRG00000034196)
Goldfish	MODERN SPECIES	9	psmd8 (ENSCARG00000057528)	BICRA (ENSCARG00000057489)	ehd2b (ENSCARG00000057461)	napab (ENSCARG00000057340)	ENSCARG00000057319	ENSCARG00000057308	ENSCARG00000057266	ENSCARG00000057138	ilvbl (ENSCARG00000053775)	FAM118B (ENSCARG00000053557)	SRPRA (ENSCARG00000053510)	arfgap2 (ENSCARG00000053357)	ENSCARG00000053326	pex16 (ENSCARG00000053293)	large2 (ENSCARG00000053014)	KIFC3 (ENSCARG00000052913) #22	wt1b (ENSCARG00000052839)	eif3m (ENSCARG00000052731)	prrg4 (ENSCARG00000052701)	QSER1 (ENSCARG00000052686)	depdc7a (ENSCARG00000052650)	cstf3 (ENSCARG00000051363)	rpl35a (ENSCARG00000051257)	ABCC5a (ENSCARG00000047885)	rnpepl1 (ENSCARG00000047458)	DVL3 (ENSCARG00000046684)	ap2m1b (ENSCARG00000045760)	mmp23bb (ENSCARG00000045711)	ENSCARG00000044392	blvrb (ENSCARG00000044236)	sertad3 (ENSCARG00000044230)
Zebrafish	MODERN SPECIES	9	spred3 (ENSDARG00000040358)	psmd8 (ENSDARG00000020454)	BICRA (ENSDARG00000061159)	ehd2b (ENSDARG00000040362)	napab (ENSDARG00000020405)	ENSDARG00000068219	ENSDARG00000034941	ilvbl (ENSDARG00000017126)	FAM118B (ENSDARG00000078983)	SRPRA (ENSDARG00000061124)	arfgap2 (ENSDARG00000067601)	ENSDARG00000102234	pex16 (ENSDARG00000058202)	large2 (ENSDARG00000017058)	ENSDARG00000068242	KIFC3 (ENSDARG00000054978) #22	wt1b (ENSDARG00000007990)	eif3m (ENSDARG00000013931)	prrg4 (ENSDARG00000030753)	QSER1 (ENSDARG00000074750)	depdc7a (ENSDARG00000055043)	cstf3 (ENSDARG00000018904)	rpl35a (ENSDARG00000088030)	abcc5 (ENSDARG00000061233)	rnpepl1 (ENSDARG00000007813)	DVL3 (ENSDARG00000103462)	ap2m1b (ENSDARG00000033899)	mmp23bb (ENSDARG00000009825)	pcyt1ab (ENSDARG00000004492)	ENSDARG00000111942	SPTBN4 (ENSDARG00000092624)
Euteleosteomorpha	ANCESTRAL SPECIES	312								ENSGT00950000183205.a	ENSGT00950000182839.B.b.a	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000008139
Acanthomorphata	ANCESTRAL SPECIES	139	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00950000183205.a	ENSGT00950000182839.B.b.a	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00940000154824.h #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600
Euacanthomorphacea	ANCESTRAL SPECIES	84	ENSGT01050000244900.a.a.b.eb	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00950000182839.B.b.a	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00940000154824.h #20	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600
Percomorphaceae	ANCESTRAL SPECIES	132												ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600
Percomorphaceae_B	ANCESTRAL SPECIES	33						ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000180399	ENSGT00940000154807.b	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a
Ovalentaria	ANCESTRAL SPECIES	28						ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000180399	ENSGT00940000154807.b	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000156431	ENSGT00940000164386	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212	ENSGT00940000154807.b	ENSGT00940000180399	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000164386	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT01030000235215	ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212	ENSGT00940000154807.b	ENSGT00940000180399	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h
Aplocheiloidei	ANCESTRAL SPECIES	100							ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h	ENSGT00940000157327.o.b	ENSGT00940000159716
Mangrove rivulus	MODERN SPECIES	99				ENSKMAG00000011165	ENSKMAG00000011150	adra2db (ENSKMAG00000011107)	ENSKMAG00000011086	gpn1 (ENSKMAG00000011063)	stmn4l (ENSKMAG00000011037)	il17a/f1 (ENSKMAG00000011057)	ENSKMAG00000011006	gtf2a2 (ENSKMAG00000010986)	FOXB1 (ENSKMAG00000010963)	anxa2b (ENSKMAG00000010939)	ENSKMAG00000010827	KIFC3 (ENSKMAG00000010689) #22	katnb1 (ENSKMAG00000010627) #23	ENSKMAG00000010603	ARSI (ENSKMAG00000010585)	ENSKMAG00000010567	tmco6 (ENSKMAG00000010536)	aldob (ENSKMAG00000010495)	ENSKMAG00000010474	rnf20 (ENSKMAG00000010377)	ENSKMAG00000010327	prpf19 (ENSKMAG00000010257)	tcirg1b (ENSKMAG00000010216)	mrpl18 (ENSKMAG00000010162)	ENSKMAG00000010126	ZBTB5 (ENSKMAG00000010104)	grhpra (ENSKMAG00000010074)
Turquoise killifish	MODERN SPECIES	1616	ENSNFUG00015006967	RASGRF1 (ENSNFUG00015006520)	OLA.11922 (ENSNFUG00015006420)	idh2 (ENSNFUG00015005613)	ENSNFUG00015005475	ZNF710 (ENSNFUG00015005470)	GPN1 (ENSNFUG00015005389)	stmn4l (ENSNFUG00015005339)	il17a/f1 (ENSNFUG00015005322)	ENSNFUG00015005295	gtf2a2 (ENSNFUG00015005283)	FOXB1 (ENSNFUG00015005277)	anxa2b (ENSNFUG00015005270)	ENSNFUG00015005257	ENSNFUG00015004680	KIFC3 (ENSNFUG00015004607) #22	ENSNFUG00015004471	slc9a5 (ENSNFUG00015004416)	cebpg (ENSNFUG00015004368)	CEBPA (ENSNFUG00015004364)	gpatch1 (ENSNFUG00015004299)	WDR59 (ENSNFUG00015004127)	NOB1 (ENSNFUG00015004079)	COG8 (ENSNFUG00015004064)	idh3a (ENSNFUG00015003878)	CIB2 (ENSNFUG00015003812)	HSD11B2 (ENSNFUG00015003798)	zdhhc1 (ENSNFUG00015003785)	TPPP3 (ENSNFUG00015003778)	ENSNFUG00015003611	ctrb.3 (ENSNFUG00015003607)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000159150	ENSGT00940000166375	ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212	ENSGT00940000154807.b	ENSGT00940000180399	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h
NAME_4	ANCESTRAL SPECIES	443														ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a
Mummichog	MODERN SPECIES	844														anxa2b (ENSFHEG00000022570)	ENSFHEG00000022616	KIFC3 (ENSFHEG00000022677) #22	katnb1 (ENSFHEG00000022767) #23	rab8b (ENSFHEG00000022806)	ENSFHEG00000022834
Sheepshead minnow	MODERN SPECIES	1443														anxa2b (ENSCVAG00000012451)	ENSCVAG00000012984	KIFC3 (ENSCVAG00000013123) #22	katnb1 (ENSCVAG00000013154) #23
Poeciliinae	ANCESTRAL SPECIES	35	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000156431	ENSGT00940000158481.d	ENSGT00940000157667.d	ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h	ENSGT00940000157327.o.b	ENSGT00940000159716
Poecilia	ANCESTRAL SPECIES	4	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000156431	ENSGT00940000158481.d	ENSGT00940000157667.d	ENSGT01030000234633.A.a.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.k	ENSGT00940000154807.b	ENSGT00940000160212.l	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000162291	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h
NAME_6	ANCESTRAL SPECIES	448																ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.k
Sailfin molly	MODERN SPECIES	1225															ENSPLAG00000013220	KIFC3 (ENSPLAG00000013239) #22	katnb1 (ENSPLAG00000013260) #23	ENSPLAG00000013283	ENSPLAG00000013302	slc9a5 (ENSPLAG00000013343)	FHOD1 (ENSPLAG00000013625)
Amazon molly	MODERN SPECIES	1038																KIFC3 (ENSPFOG00000014421) #22	katnb1 (ENSPFOG00000014305) #23	ENSPFOG00000014247	ENSPFOG00000014128	slc9a5 (ENSPFOG00000024753)
Guppy	MODERN SPECIES	5	rpl12 (ENSPREG00000009233)	pole3 (ENSPREG00000009175)	kmt5b (ENSPREG00000009144)	cd82a (ENSPREG00000009127)	tspan18a (ENSPREG00000009099)	EMILIN1 (ENSPREG00000009073)	gpn1 (ENSPREG00000009028)	stmn4l (ENSPREG00000009000)	ENSPREG00000008990	ENSPREG00000008980	ENSPREG00000008942	gtf2a2 (ENSPREG00000008924)	ENSPREG00000008898	anxa2b (ENSPREG00000008879)	ENSPREG00000008849	KIFC3 (ENSPREG00000008745) #22	katnb1 (ENSPREG00000008675) #23	rab8b (ENSPREG00000008638)	ENSPREG00000008588	slc9a5 (ENSPREG00000008510)	FHOD1 (ENSPREG00000008398)	ENSPREG00000008354	ENSPREG00000008331	cebpg (ENSPREG00000008318)	cebpa (ENSPREG00000008310)	ENSPREG00000008294	gpatch1 (ENSPREG00000008264)	ENSPREG00000008244	WDR59 (ENSPREG00000007781)	NOB1 (ENSPREG00000007675)	cog8 (ENSPREG00000007652)
Platyfish	MODERN SPECIES	18	rpl12 (ENSXMAG00000023218)	kmt5b (ENSXMAG00000028852)	cd82a (ENSXMAG00000009251)	tspan18a (ENSXMAG00000022831)	ENSXMAG00000005420	gpn1 (ENSXMAG00000005436)	il17a/f1 (ENSXMAG00000005471)	stmn4l (ENSXMAG00000005464)	ENSXMAG00000029789	znf395a (ENSXMAG00000000690)	gtf2a2 (ENSXMAG00000027547)	ENSXMAG00000025745	anxa2b (ENSXMAG00000013331)	ENSXMAG00000026029	ENSXMAG00000013027	KIFC3 (ENSXMAG00000014566) #22	ENSXMAG00000023281 #23	ENSXMAG00000021833	ENSXMAG00000014523	ENSXMAG00000025302	slc9a5 (ENSXMAG00000011951)	FHOD1 (ENSXMAG00000011977)	cebpg (ENSXMAG00000019691)	cebpa (ENSXMAG00000019692)	ENSXMAG00000018182	ENSXMAG00000017342	WDR59 (ENSXMAG00000017352)	NOB1 (ENSXMAG00000017371)	cog8 (ENSXMAG00000026998)	idh3a (ENSXMAG00000017403)	CIB2 (ENSXMAG00000004197)
Oryzias	ANCESTRAL SPECIES	13	ENSGT00940000158300.f.b	ENSGT00940000158300.f.a	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.n	ENSGT00940000154807.b	ENSGT00940000160212.m	ENSGT00940000166016	ENSGT00940000160676	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00390000003194.p.a.a.a	ENSGT00390000003194.p.b	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.n	ENSGT00940000154807.b	ENSGT00940000160212.m	ENSGT00940000160676	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.g.b.a	ENSGT00940000157327.o.b
Chinese medaka	MODERN SPECIES	22	ENSOSIG00000005347	ENSOSIG00000005348	ENSOSIG00000005350	ENSOSIG00000005354	spg21 (ENSOSIG00000005408)	AP2A2 (ENSOSIG00000005646)	gpn1 (ENSOSIG00000006505)	stmn4l (ENSOSIG00000006525)	il17a/f1 (ENSOSIG00000006527)	ENSOSIG00000006529	znf395a (ENSOSIG00000006531)	gtf2a2 (ENSOSIG00000006535)	FOXB1 (ENSOSIG00000006540)	anxa2b (ENSOSIG00000006548)	ENSOSIG00000006663	KIFC3 (ENSOSIG00000010592) #22	ENSOSIG00000010594	rab8b (ENSOSIG00000010595)	FHOD1 (ENSOSIG00000010626)	cebpa (ENSOSIG00000010639)	cebpg (ENSOSIG00000010640)	ENSOSIG00000010641	WDR59 (ENSOSIG00000010657)	NOB1 (ENSOSIG00000011028)	cog8 (ENSOSIG00000011032)	CIB2 (ENSOSIG00000011098)	EFL1 (ENSOSIG00000011099)	lmnl3 (ENSOSIG00000011385)	gjd6 (ENSOSIG00000011406)	BNC1 (ENSOSIG00000011408)	RBBP7 (ENSOSIG00000011411)
Japanese Medaka HdrR	MODERN SPECIES	17	spg21 (ENSORLG00000018308)	AP2A2 (ENSORLG00000018333)	ENSORLG00000023828	ENSORLG00000023127	ENSORLG00000026839	ENSORLG00000018354	il17a/f1 (ENSORLG00000028123)	il17a/f2 (ENSORLG00000023998)	znf395a (ENSORLG00000022405)	gtf2a2 (ENSORLG00000018367)	FOXB1 (ENSORLG00000028893)	ANXA2 (ENSORLG00000018369)	ENSORLG00000022359	ENSORLG00000022524	ENSORLG00000029334	KIFC3 (ENSORLG00000018386) #22	katnb1 (ENSORLG00000018451) #23	ENSORLG00000029663	ENSORLG00000027706	ENSORLG00000026127	slc9a5 (ENSORLG00000026778)	FHOD1 (ENSORLG00000029911)	ENSORLG00000024710	ENSORLG00000029920	ENSORLG00000022944	CEBPG (ENSORLG00000018652)	cebpa (ENSORLG00000018660)	ENSORLG00000027685	ENSORLG00000023517	gpatch1 (ENSORLG00000018706)	WDR59 (ENSORLG00000018798)
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000158300.f.a	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT01100000263556.a.b.a.a.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00940000155363.v.a	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.m	ENSGT00940000166016	ENSGT00940000162646	ENSGT00390000007074	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182989.A.a.h	ENSGT00940000157327.o.b	ENSGT00550000074806	ENSGT00940000164952
Indian medaka	MODERN SPECIES	26	shcbp1 (ENSOMEG00000021893)	spg21 (ENSOMEG00000021924)	ENSOMEG00000021934	AP2A2 (ENSOMEG00000021958)	ENSOMEG00000021985	ENSOMEG00000021998	gpn1 (ENSOMEG00000022023)	STMN4 (ENSOMEG00000022044)	il17a/f1 (ENSOMEG00000022059)	ENSOMEG00000022068	znf395a (ENSOMEG00000022086)	gtf2a2 (ENSOMEG00000022100)	FOXB1 (ENSOMEG00000022111)	ANXA2 (ENSOMEG00000022329)	ENSOMEG00000022449	KIFC3 (ENSOMEG00000022483) #22	katnb1 (ENSOMEG00000022506) #23	rab8b (ENSOMEG00000022522)	ENSOMEG00000022564	ENSOMEG00000022592	slc9a5 (ENSOMEG00000000917)	FHOD1 (ENSOMEG00000022632)	cebpg (ENSOMEG00000022638)	cebpa (ENSOMEG00000022643)	ENSOMEG00000022650	gpatch1 (ENSOMEG00000022688)	WDR59 (ENSOMEG00000022705)	NOB1 (ENSOMEG00000022722)	cog8 (ENSOMEG00000022735)	idh3a (ENSOMEG00000022752)	CIB2 (ENSOMEG00000022760)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000175407	ENSGT00950000182989.A.a.g.a
Pomacentridae	ANCESTRAL SPECIES	96	ENSGT00940000164386	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT01000000216300	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845.fb	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.g.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Pomacentridae_A	ANCESTRAL SPECIES	97	ENSGT00940000164386	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000161887	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT01000000216300	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845.fb	ENSGT00940000155363.v.a.c	ENSGT00950000182989.A.a.g.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Amphiprion	ANCESTRAL SPECIES	138						ENSGT00940000156563.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT01000000216300	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845.fb	ENSGT00940000155363.v.a.c	ENSGT00950000182989.A.a.g.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES		nqo1 (ENSAPEG00000000053)	ENSAPEG00000000052	ENSAPEG00000000051	gpn1 (ENSAPEG00000000050)	STMN4 (ENSAPEG00000000049)	il17a/f1 (ENSAPEG00000000048)	ENSAPEG00000000047	PAQR8 (ENSAPEG00000000046)	znf395a (ENSAPEG00000000045)	gtf2a2 (ENSAPEG00000000044)	ENSAPEG00000000043	ENSAPEG00000000042	ENSAPEG00000000041	ENSAPEG00000000040	ENSAPEG00000000039	KIFC3 (ENSAPEG00000000038) #22	ENSAPEG00000000037	ENSAPEG00000000036	KIFC3 (ENSAPEG00000000035) #22	katnb1 (ENSAPEG00000000034) #23	cog8 (ENSAPEG00000000033)	ENSAPEG00000000032	katnb1 (ENSAPEG00000000031) #23	cog8 (ENSAPEG00000000030)	NOB1 (ENSAPEG00000000029)	WDR59 (ENSAPEG00000000028)	ENSAPEG00000000027	gpatch1 (ENSAPEG00000000026)	cebpa (ENSAPEG00000000025)	cebpg (ENSAPEG00000000024)	ENSAPEG00000000023
Orange clownfish	MODERN SPECIES		gpn1 (ENSAPEG00000000050)	STMN4 (ENSAPEG00000000049)	il17a/f1 (ENSAPEG00000000048)	ENSAPEG00000000047	PAQR8 (ENSAPEG00000000046)	znf395a (ENSAPEG00000000045)	gtf2a2 (ENSAPEG00000000044)	ENSAPEG00000000043	ENSAPEG00000000042	ENSAPEG00000000041	ENSAPEG00000000040	ENSAPEG00000000039	KIFC3 (ENSAPEG00000000038) #22	ENSAPEG00000000037	ENSAPEG00000000036	KIFC3 (ENSAPEG00000000035) #22	katnb1 (ENSAPEG00000000034) #23	cog8 (ENSAPEG00000000033)	ENSAPEG00000000032	katnb1 (ENSAPEG00000000031) #23	cog8 (ENSAPEG00000000030)	NOB1 (ENSAPEG00000000029)	WDR59 (ENSAPEG00000000028)	ENSAPEG00000000027	gpatch1 (ENSAPEG00000000026)	cebpa (ENSAPEG00000000025)	cebpg (ENSAPEG00000000024)	ENSAPEG00000000023	FHOD1 (ENSAPEG00000000022)	slc9a5 (ENSAPEG00000000021)	ENSAPEG00000000020
Clown anemonefish	MODERN SPECIES	869																KIFC3 (ENSAOCG00000019209) #22
Spiny chromis	MODERN SPECIES	1338														GASK1A (ENSAPOG00000015141)	ENSAPOG00000015488	KIFC3 (ENSAPOG00000015539) #22
Bicolor damselfish	MODERN SPECIES	776	kmt5b (ENSSPAG00000015934)	pole3 (ENSSPAG00000015915)	rpl12 (ENSSPAG00000015864)	KCNG4 (ENSSPAG00000015851)	gabarapl2 (ENSSPAG00000015763)	ENSSPAG00000015718	ENSSPAG00000015705	gpn1 (ENSSPAG00000015690)	STMN4 (ENSSPAG00000015681)	il17a/f1 (ENSSPAG00000015677)	ENSSPAG00000015665	PAQR8 (ENSSPAG00000015318)	gtf2a2 (ENSSPAG00000015257)	ENSSPAG00000015245	ENSSPAG00000015225	KIFC3 (ENSSPAG00000015113) #22
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000156938.e.e	ENSGT01030000235215	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000175407	ENSGT00940000157327.o.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918.m.b #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000175407	ENSGT00940000157327.o.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00390000006922	ENSGT00940000156938.e.e	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918.m.b #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000175407	ENSGT00940000157327.o.b
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000156938.e.e	ENSGT00940000166375.c	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375.d	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918.m.b #23	ENSGT00390000015893	ENSGT00390000015857.c	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000154807.b	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000175407
Burton s mouthbrooder	MODERN SPECIES	330	ENSHBUG00000022729	ENSHBUG00000022743	GABARAPL2 (ENSHBUG00000022807)	ENSHBUG00000022847	ENSHBUG00000000703	gpn1 (ENSHBUG00000022933)	stmn4l (ENSHBUG00000022954)	il17a/f1 (ENSHBUG00000022965)	il17a/f2 (ENSHBUG00000022978)	PAQR8 (ENSHBUG00000022994)	znf395a (ENSHBUG00000023022)	gtf2a2 (ENSHBUG00000023009)	FOXB1 (ENSHBUG00000023041)	anxa2b (ENSHBUG00000023052)	ENSHBUG00000000708	KIFC3 (ENSHBUG00000023163) #22	katnb1 (ENSHBUG00000023246) #23	cog8 (ENSHBUG00000023279)	ENSHBUG00000023306
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000156938.e.e	ENSGT00940000166375.c	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375.d	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918.m.b #23	ENSGT00390000015893	ENSGT00390000015857.c	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h	ENSGT00940000157327.o.b	ENSGT00940000159716
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000156938.e.e	ENSGT00940000166375.c	ENSGT00940000155010.a	ENSGT00940000156563.a	ENSGT00940000166375.d	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a.g	ENSGT00940000156618.c.b	ENSGT01030000234838.a	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918.m.b #23	ENSGT00390000015893	ENSGT00390000015857.c	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000004933.k.a.f	ENSGT00390000002634.a.f.b.b.a.b	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a.h
Zebra mbuna	MODERN SPECIES	1091	ENSMZEG00005003133	ENSMZEG00005003145	GABARAPL2 (ENSMZEG00005003173)	ENSMZEG00005003230	ENSMZEG00005003254	gpn1 (ENSMZEG00005003265)	STMN4 (ENSMZEG00005003322)	il17a/f1 (ENSMZEG00005003337)	ENSMZEG00005003351	PAQR8 (ENSMZEG00005003358)	znf395a (ENSMZEG00005003395)	gtf2a2 (ENSMZEG00005003405)	FOXB1 (ENSMZEG00005003422)	anxa2b (ENSMZEG00005003459)	ENSMZEG00005003497	KIFC3 (ENSMZEG00005003548) #22	katnb1 (ENSMZEG00005003770) #23	cog8 (ENSMZEG00005003805)	ENSMZEG00005003827	ENSMZEG00005003839	ENSMZEG00005003885	slc7a6os (ENSMZEG00005003905)	slc7a6 (ENSMZEG00005003935)	adgrg1 (ENSMZEG00005003968) ##25	SYAP1 (ENSMZEG00005003985)	phospho2 (ENSMZEG00005004021)	ENSMZEG00005004029	CDH8 (ENSMZEG00005004052)	ADAMTS18 (ENSMZEG00005004109)	PHKB (ENSMZEG00005004146)	ITFG1 (ENSMZEG00005004302)
Eastern happy	MODERN SPECIES		STMN4 (ENSACLG00000025605)	il17a/f1 (ENSACLG00000025598)	ENSACLG00000025591	ENSACLG00000025569	ENSACLG00000025556	ENSACLG00000025539	PAQR8 (ENSACLG00000025187)	gtf2a2 (ENSACLG00000025164)	znf395a (ENSACLG00000025151)	FOXB1 (ENSACLG00000025136)	FOXB1 (ENSACLG00000025130)	anxa2b (ENSACLG00000025093)	ENSACLG00000024962	katnb1 (ENSACLG00000024949) #23	cog8 (ENSACLG00000024947)	KIFC3 (ENSACLG00000024931) #22	ENSACLG00000024924 #23	cog8 (ENSACLG00000024916)	NOB1 (ENSACLG00000024897)	WDR59 (ENSACLG00000024788)	ENSACLG00000024772	pthlha (ENSACLG00000024765)	ENSACLG00000024749	gpatch1 (ENSACLG00000024740)	ENSACLG00000024708	cebpa (ENSACLG00000024701)	FHOD1 (ENSACLG00000024550)	slc9a5 (ENSACLG00000024501)	ENSACLG00000024482	ENSACLG00000024444	ENSACLG00000024431
P. nyererei	MODERN SPECIES	314	KCNG4 (ENSPNYG00000019340)	ENSPNYG00000019334	GABARAPL2 (ENSPNYG00000019300)	ENSPNYG00000019201	ENSPNYG00000019174	gpn1 (ENSPNYG00000019130)	stmn4l (ENSPNYG00000019112)	il17a/f1 (ENSPNYG00000019099)	ENSPNYG00000019075	PAQR8 (ENSPNYG00000018822)	znf395a (ENSPNYG00000018766)	gtf2a2 (ENSPNYG00000018743)	FOXB1 (ENSPNYG00000018721)	anxa2b (ENSPNYG00000018705)	ENSPNYG00000018632	KIFC3 (ENSPNYG00000018579) #22	katnb1 (ENSPNYG00000018522) #23	cog8 (ENSPNYG00000018497)	NOB1 (ENSPNYG00000018449)	WDR59 (ENSPNYG00000018309)	ENSPNYG00000018264	ENSPNYG00000018246	gpatch1 (ENSPNYG00000018189)	cebpa (ENSPNYG00000018173)	ENSPNYG00000018137	ENSPNYG00000018117	FHOD1 (ENSPNYG00000018080)	slc9a5 (ENSPNYG00000018037)	ENSPNYG00000017994	ENSPNYG00000017943	ENSPNYG00000017927
Lyretail cichlid	MODERN SPECIES	729																ENSNBRG00000022720 #22	katnb1 (ENSNBRG00000022629) #23	ENSNBRG00000022602
Nile tilapia	MODERN SPECIES		ENSONIG00000030861	GABARAPL2 (ENSONIG00000036119)	ENSONIG00000003376	ENSONIG00000003375	gpn1 (ENSONIG00000003361)	STMN4 (ENSONIG00000003357)	il17a/f1 (ENSONIG00000003356)	ENSONIG00000003355	PAQR8 (ENSONIG00000003353)	znf395a (ENSONIG00000029776)	gtf2a2 (ENSONIG00000003349)	ENSONIG00000032938	ENSONIG00000038692	ANXA2 (ENSONIG00000003339)	CNGB1 (ENSONIG00000003335) #20	KIFC3 (ENSONIG00000003327) #22	katnb1 (ENSONIG00000003323) #23	cog8 (ENSONIG00000003321)	NOB1 (ENSONIG00000003319)	WDR59 (ENSONIG00000003314)	gpatch1 (ENSONIG00000003302)	ENSONIG00000029775	cebpa (ENSONIG00000003300)	cebpg (ENSONIG00000020606)	ENSONIG00000003297	FHOD1 (ENSONIG00000003289)	slc9a5 (ENSONIG00000003278)	rab8b (ENSONIG00000003271)	idh3a (ENSONIG00000003269)	CIB2 (ENSONIG00000003267)	hsd11b2 (ENSONIG00000003266)
Midas cichlid	MODERN SPECIES	878														anxa2b (ENSACIG00000020937)	CNGB1 (ENSACIG00000021060) #20	KIFC3 (ENSACIG00000021145) #22
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000166016	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00950000182839.B.b.a	ENSGT00940000175971	ENSGT00940000157462.C.c.a	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000180493	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000155363.v.a	ENSGT00940000159716	ENSGT00940000159191	ENSGT00940000155024.a.b.d	ENSGT00940000153216.a.a.c.a	ENSGT00940000153216.a.a.c.b.h
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000014622	blmh (ENSTNIG00000002234)	ENSTNIG00000003312	ENSTNIG00000002235	ENSTNIG00000002236	gch2 (ENSTNIG00000000301)	rrp15 (ENSTNIG00000002237)	ENSTNIG00000002238	ENSTNIG00000001072	ENSTNIG00000002239	ENSTNIG00000002240	ENSTNIG00000001332	ENSTNIG00000002244	ENSTNIG00000002245	ENSTNIG00000002246	KIFC3 (ENSTNIG00000002248) #22	ENSTNIG00000002249	ENSTNIG00000002250	LRRC58 (ENSTNIG00000002251)	drd4b (ENSTNIG00000002252)	camk1gb (ENSTNIG00000001925)	ENSTNIG00000002323	ENSTNIG00000002255	ENSTNIG00000002256	wls (ENSTNIG00000002257)	ENSTNIG00000000695	ENSTNIG00000002258	ENSTNIG00000000064	ENSTNIG00000002259	ENSTNIG00000002261	ENSTNIG00000002262
Tetraodon	MODERN SPECIES	20	ENSTNIG00000003300	guca1g (ENSTNIG00000003301)	RASSF7 (ENSTNIG00000003302)	ENSTNIG00000003395	BRSK2 (ENSTNIG00000003396)	ENSTNIG00000001743	ENSTNIG00000003397	large2 (ENSTNIG00000002573)	gpn1 (ENSTNIG00000002572)	STMN4 (ENSTNIG00000002571)	ENSTNIG00000000521	ENSTNIG00000002570	gtf2a2 (ENSTNIG00000002569)	ENSTNIG00000004286	ENSTNIG00000004285	KIFC3 (ENSTNIG00000002550) #22	katnb1 (ENSTNIG00000002551) #23	cog8 (ENSTNIG00000002004)	NOB1 (ENSTNIG00000002552)	WDR59 (ENSTNIG00000002553)	gpatch1 (ENSTNIG00000002554)	cebpa (ENSTNIG00000003102)	CEBPG (ENSTNIG00000001629)	FHOD1 (ENSTNIG00000001912)	slc9a5 (ENSTNIG00000010217)	ENSTNIG00000010218	zdhhc1 (ENSTNIG00000010219)	trpm1a (ENSTNIG00000010220)	ENSTNIG00000010221	ENSTNIG00000010222	ctrb.3 (ENSTNIG00000010223)
Fugu	MODERN SPECIES	4	ENSTRUG00000025911	guca1g (ENSTRUG00000033235)	ENSTRUG00000031459	ENSTRUG00000031392	BRSK2 (ENSTRUG00000005324)	ENSTRUG00000022004	ENSTRUG00000005286	large2 (ENSTRUG00000026540)	gpn1 (ENSTRUG00000004290)	stmn4l (ENSTRUG00000028085)	ENSTRUG00000020736	PAQR8 (ENSTRUG00000026141)	gtf2a2 (ENSTRUG00000029262)	FOXB1 (ENSTRUG00000003702)	anxa2b (ENSTRUG00000024747)	KIFC3 (ENSTRUG00000002753) #22	katnb1 (ENSTRUG00000003894) #23	cog8 (ENSTRUG00000004616)	NOB1 (ENSTRUG00000004780)	WDR59 (ENSTRUG00000005124)	ENSTRUG00000032736	cebpa (ENSTRUG00000029800)	CEBPG (ENSTRUG00000020219)	FHOD1 (ENSTRUG00000024885)	slc9a5 (ENSTRUG00000021813)	ENSTRUG00000007371	HSD11B2 (ENSTRUG00000007668)	zdhhc1 (ENSTRUG00000022662)	trpm1a (ENSTRUG00000024832)	ENSTRUG00000028110	ENSTRUG00000002776
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	2648																KIFC3 (ENSLBEG00000005827) #22
Ballan wrasse	MODERN SPECIES	142	ENSLBEG00000025703	ENSLBEG00000025718	c1qtnf4 (ENSLBEG00000025735)	ndufs3 (ENSLBEG00000025754)	ptpmt1 (ENSLBEG00000025784)	prc1b (ENSLBEG00000025812)	vps33b (ENSLBEG00000025870)	hddc3 (ENSLBEG00000025928)	hypk (ENSLBEG00000025967)	mfap1 (ENSLBEG00000025946)	SERINC4 (ENSLBEG00000025989)	ENSLBEG00000026007	ANXA2 (ENSLBEG00000026028)	ENSLBEG00000026050	ENSLBEG00000026105	KIFC3 (ENSLBEG00000026259) #22	katnb1 (ENSLBEG00000026304) #23	cog8 (ENSLBEG00000026357)	NOB1 (ENSLBEG00000026375)	WDR59 (ENSLBEG00000026428)	ENSLBEG00000026506	gpatch1 (ENSLBEG00000026527)	ENSLBEG00000026551	cebpa (ENSLBEG00000026560)	cebpg (ENSLBEG00000026574)	ENSLBEG00000026584
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Perciformes	ANCESTRAL SPECIES	46													ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Cottioidei	ANCESTRAL SPECIES	74												ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716	ENSGT00940000159191
Lumpfish	MODERN SPECIES	18											gtf2a2 (ENSCLMG00005000554)	FOXB1 (ENSCLMG00005000552)	ENSCLMG00005000475	ENSCLMG00005000394	ENSCLMG00005000392	KIFC3 (ENSCLMG00005000308) #22	katnb1 (ENSCLMG00005000188) #23	cog8 (ENSCLMG00005000077)	NOB1 (ENSCLMG00005018384)	WDR59 (ENSCLMG00005018090)	ENSCLMG00005018089	gpatch1 (ENSCLMG00005018087)	ENSCLMG00005018086	ENSCLMG00005018085	cebpa (ENSCLMG00005018084)	cebpg (ENSCLMG00005018083)	ENSCLMG00005018081	FHOD1 (ENSCLMG00005017682)	ENSCLMG00005017656	IDH3A (ENSCLMG00005017451)	CIB2 (ENSCLMG00005017450)
Stickleback	MODERN SPECIES	1	ENSGACG00000017627	guca1g (ENSGACG00000017625)	ENSGACG00000017623	ENSGACG00000017622	ENSGACG00000017620	SHANK2 (ENSGACG00000017616)	ppfia1 (ENSGACG00000017613)	ENSGACG00000017609	rnmt (ENSGACG00000017603)	gtf2a2 (ENSGACG00000017600)	FOXB1 (ENSGACG00000017597)	ENSGACG00000017591	ENSGACG00000017589	ENSGACG00000017588	ENSGACG00000017581	KIFC3 (ENSGACG00000017572) #22	katnb1 (ENSGACG00000017570) #23	cog8 (ENSGACG00000017562)	NOB1 (ENSGACG00000017552)	WDR59 (ENSGACG00000017547)	gpatch1 (ENSGACG00000017544)	cebpg (ENSGACG00000017539)	FHOD1 (ENSGACG00000017531)	slc9a5 (ENSGACG00000017527)	ENSGACG00000017523	rab8b (ENSGACG00000017522)	idh3a (ENSGACG00000017520)	CIB2 (ENSGACG00000017516)	hsd11b2 (ENSGACG00000017514)	ENSGACG00000017513	tppp3 (ENSGACG00000017512)
Perciformes_a	ANCESTRAL SPECIES	152																ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857
Pike perch	MODERN SPECIES	224							ENSSLUG00000014955	PAQR8 (ENSSLUG00000014780)	gtf2a2 (ENSSLUG00000014759)	znf395a (ENSSLUG00000014752)	ENSSLUG00000014723	ENSSLUG00000013961	ENSSLUG00000013919	ENSSLUG00000013914	ENSSLUG00000013908	KIFC3 (ENSSLUG00000013804) #22	katnb1 (ENSSLUG00000012727) #23	cog8 (ENSSLUG00000012662)	ENSSLUG00000012658	WDR59 (ENSSLUG00000012063)	ENSSLUG00000012014	ENSSLUG00000012008	ENSSLUG00000012000	ENSSLUG00000011995	ENSSLUG00000011987
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000154390.E.d	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716	ENSGT00940000159191
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000154390.E.d	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000166016	ENSGT00940000162646	ENSGT00940000160212	ENSGT00940000159190	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716	ENSGT00940000159191	ENSGT00940000153875.d.b
European seabass	MODERN SPECIES	18	ENSDLAG00005017608	ENSDLAG00005017655	ENSDLAG00005032140	ENSDLAG00005018709	ENSDLAG00005018733	gpn1 (ENSDLAG00005018815)	ENSDLAG00005031766	il17a/f1 (ENSDLAG00005018882)	ENSDLAG00005016190	ENSDLAG00005018896	ENSDLAG00005019014	GTF2A2 (ENSDLAG00005019025)	FOXB1 (ENSDLAG00005028743)	ENSDLAG00005019040	ANXA2 (ENSDLAG00005019055)	ENSDLAG00005019075 #22	ENSDLAG00005031187 #23	cog8 (ENSDLAG00005029542)	ENSDLAG00005031703	ENSDLAG00005004753	ENSDLAG00005027487	ENSDLAG00005005658	ENSDLAG00005031200	ENSDLAG00005029829	ENSDLAG00005030855	ENSDLAG00005002800	ENSDLAG00005028866	ENSDLAG00005029532	ENSDLAG00005034443	ENSDLAG00005030327	ENSDLAG00005030762
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005008431	ENSLCRG00005008432	large2 (ENSLCRG00005008437)	ENSLCRG00005009005	gpn1 (ENSLCRG00005009007)	stmn4l (ENSLCRG00005009010)	ENSLCRG00005009011	ENSLCRG00005009013	PAQR8 (ENSLCRG00005009014)	znf395a (ENSLCRG00005009275)	GTF2A2 (ENSLCRG00005009279)	FOXB1 (ENSLCRG00005009288)	ENSLCRG00005009289	anxa2b (ENSLCRG00005009293)	ENSLCRG00005009318	KIFC3 (ENSLCRG00005009326) #22	cebpg (ENSLCRG00005010048)	ENSLCRG00005010049	ENSLCRG00005002367	ENSLCRG00005002374	ENSLCRG00005002384	gpatch1 (ENSLCRG00005002389)	WDR59 (ENSLCRG00005002508)	ENSLCRG00005004546	NOB1 (ENSLCRG00005004549)	ENSLCRG00005004558	cog8 (ENSLCRG00005004559)	katnb1 (ENSLCRG00005004564) #23	ENSLCRG00005004582	dnaja3b (ENSLCRG00005004583)	FHOD1 (ENSLCRG00005004587)
Gilthead seabream	MODERN SPECIES	18	gtf2a2 (ENSSAUG00010006471)	znf395a (ENSSAUG00010006472)	PAQR8 (ENSSAUG00010006481)	ENSSAUG00010006631	il17a/f1 (ENSSAUG00010006632)	STMN4 (ENSSAUG00010006633)	gpn1 (ENSSAUG00010006636)	ENSSAUG00010006728	ENSSAUG00010006730	ENSSAUG00010006731	ENSSAUG00010006733	ENSSAUG00010006737	anxa2b (ENSSAUG00010006741)	ENSSAUG00010006743	ENSSAUG00010006745	KIFC3 (ENSSAUG00010006751) #22	katnb1 (ENSSAUG00010006856) #23	cog8 (ENSSAUG00010006937)	NOB1 (ENSSAUG00010006944)	WDR59 (ENSSAUG00010006959)	ENSSAUG00010006980	cebpa (ENSSAUG00010006985)	cebpg (ENSSAUG00010006988)	FHOD1 (ENSSAUG00010007005)	slc9a5 (ENSSAUG00010007112)	ENSSAUG00010007115	rab8b (ENSSAUG00010007116)	idh3a (ENSSAUG00010007126)	hsd11b2 (ENSSAUG00010007160)	ENSSAUG00010007163	tppp3 (ENSSAUG00010007166)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000153216.a.a.c.b.h
Anabantaria	ANCESTRAL SPECIES	41	ENSGT00940000158758	ENSGT00940000165402	ENSGT00940000161238.l	ENSGT00940000157661.e.b	ENSGT00940000157462.C.c.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000158758	ENSGT00940000165402	ENSGT00940000161238.l	ENSGT00940000157661.e.b	ENSGT00940000157462.C.c.a	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Climbing perch	MODERN SPECIES	16	ENSATEG00000015728	ENSATEG00000027923	ENSATEG00000015652	ENSATEG00000015603	gpn1 (ENSATEG00000015542)	ENSATEG00000015483	il17a/f1 (ENSATEG00000015474)	ENSATEG00000015457	ENSATEG00000014938	ENSATEG00000028076	GTF2A2 (ENSATEG00000014849)	FOXB1 (ENSATEG00000014801)	ENSATEG00000014789	ANXA2 (ENSATEG00000014760)	ENSATEG00000014732	ENSATEG00000014689 #22	ENSATEG00000014649 #23	ENSATEG00000027662	ENSATEG00000029185	cog8 (ENSATEG00000014616)	ENSATEG00000014585	ENSATEG00000014538	ENSATEG00000028188	ENSATEG00000014494	ENSATEG00000014478	ENSATEG00000014467	ENSATEG00000014220	ENSATEG00000014135	ENSATEG00000027473	ENSATEG00000029444	ENSATEG00000027029
Siamese fighting fish	MODERN SPECIES	14	large2 (ENSBSLG00000004866)	ENSBSLG00000004356	ENSBSLG00000004346	ABTB2 (ENSBSLG00000004282)	BRSK2 (ENSBSLG00000004153)	gpn1 (ENSBSLG00000003856)	STMN4 (ENSBSLG00000003655)	il17a/f1 (ENSBSLG00000003640)	ENSBSLG00000003616	PAQR8 (ENSBSLG00000002998)	znf395a (ENSBSLG00000002989)	gtf2a2 (ENSBSLG00000002979)	FOXB1 (ENSBSLG00000002972)	anxa2b (ENSBSLG00000002946)	ENSBSLG00000002647	KIFC3 (ENSBSLG00000002335) #22	katnb1 (ENSBSLG00000011425) #23	cog8 (ENSBSLG00000011412)	NOB1 (ENSBSLG00000011411)	WDR59 (ENSBSLG00000011131)	ENSBSLG00000011112	gpatch1 (ENSBSLG00000010566)	cebpa (ENSBSLG00000010557)	cebpg (ENSBSLG00000010556)	FHOD1 (ENSBSLG00000008849)	slc9a5 (ENSBSLG00000008782)	PLEKHG4 (ENSBSLG00000008753)	ctrb.3 (ENSBSLG00000008732)	galr1b (ENSBSLG00000008721)	tppp3 (ENSBSLG00000008160)	zdhhc1 (ENSBSLG00000008150)
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Carangaria_A	ANCESTRAL SPECIES	71	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212.d	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Seriola	ANCESTRAL SPECIES	88	ENSGT00940000160434	ENSGT00950000183151.a.a.a	ENSGT00940000158565	ENSGT01050000244900.a.a.b.eb	ENSGT00940000163723.A.f.b	ENSGT00390000014572	ENSGT00940000157136.a	ENSGT00940000159860.f	ENSGT01030000234838	ENSGT00940000156618.c.b	ENSGT01030000234597.a.b.a.a	ENSGT00950000183172.C	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000166016	ENSGT00940000160212.d	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Greater amberjack	MODERN SPECIES	4	CTTN (ENSSDUG00000004725)	ppfia1 (ENSSDUG00000004788)	ENSSDUG00000005149	gtf2a2 (ENSSDUG00000005169)	ENSSDUG00000005193	PAQR8 (ENSSDUG00000005306)	ENSSDUG00000006903	il17a/f1 (ENSSDUG00000006906)	STMN4 (ENSSDUG00000006916)	gpn1 (ENSSDUG00000006929)	ENSSDUG00000006982	ENSSDUG00000007010	FOXB1 (ENSSDUG00000007068)	anxa2b (ENSSDUG00000007078)	ENSSDUG00000007091	KIFC3 (ENSSDUG00000007131) #22	katnb1 (ENSSDUG00000007211) #23	cog8 (ENSSDUG00000007276)	NOB1 (ENSSDUG00000007307)	WDR59 (ENSSDUG00000007353)	ENSSDUG00000007432	gpatch1 (ENSSDUG00000007444)	cebpa (ENSSDUG00000007467)	cebpg (ENSSDUG00000007487)	ENSSDUG00000007493	ENSSDUG00000007500	FHOD1 (ENSSDUG00000007512)	slc9a5 (ENSSDUG00000007538)	ENSSDUG00000007568	rab8b (ENSSDUG00000007628)	idh3a (ENSSDUG00000007678)
Yellowtail amberjack	MODERN SPECIES	2891	ddb1 (ENSSLDG00000015804)	CTTN (ENSSLDG00000015684)	ppfia1 (ENSSLDG00000015425)	gtf2a2 (ENSSLDG00000015360)	znf395a (ENSSLDG00000015346)	PAQR8 (ENSSLDG00000014758)	ENSSLDG00000014587	il17a/f1 (ENSSLDG00000014575)	STMN4 (ENSSLDG00000014563)	gpn1 (ENSSLDG00000014532)	ENSSLDG00000014508	ENSSLDG00000014492	FOXB1 (ENSSLDG00000014473)	anxa2b (ENSSLDG00000014456)	ENSSLDG00000014431	KIFC3 (ENSSLDG00000014400) #22
Barramundi perch	MODERN SPECIES	100	ENSLCAG00010007140	large2 (ENSLCAG00010007151)	ENSLCAG00010007167	ENSLCAG00010007174	gpn1 (ENSLCAG00010007196)	STMN4 (ENSLCAG00010007232)	il17a/f1 (ENSLCAG00010007237)	ENSLCAG00010007242	PAQR8 (ENSLCAG00010007247)	znf395a (ENSLCAG00010007251)	gtf2a2 (ENSLCAG00010007257)	FOXB1 (ENSLCAG00010007264)	ENSLCAG00010007268	anxa2b (ENSLCAG00010007315)	ENSLCAG00010007488	KIFC3 (ENSLCAG00010007507) #22	katnb1 (ENSLCAG00010007553) #23	cog8 (ENSLCAG00010007595)	NOB1 (ENSLCAG00010007599)	WDR59 (ENSLCAG00010007627)	ENSLCAG00010007780	gpatch1 (ENSLCAG00010007795)	cebpa (ENSLCAG00010007850)	cebpg (ENSLCAG00010007855)	FHOD1 (ENSLCAG00010007879)	slc9a5 (ENSLCAG00010007924)	ENSLCAG00010007941	SHANK2 (ENSLCAG00010007972)	ENSLCAG00010007991	ENSLCAG00010008001	guca1g (ENSLCAG00010008007)
Pleuronectoidei	ANCESTRAL SPECIES	52	ENSGT00940000157661.e.b	ENSGT00940000176036	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000159860.f	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b	ENSGT00940000154257.b	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000007074	ENSGT00940000162646	ENSGT00940000160676	ENSGT00940000166016	ENSGT00940000160212	ENSGT00940000159190	ENSGT00940000158845	ENSGT00940000155363.v.a	ENSGT00950000182989.A.a	ENSGT00940000157327.o.b	ENSGT00940000159716
Turbot	MODERN SPECIES	17	ENSSMAG00000003303	ENSSMAG00000003339	ENSSMAG00000003415	ENSSMAG00000003439	ENSSMAG00000003488	gpn1 (ENSSMAG00000005973)	ENSSMAG00000005888	il17a/f1 (ENSSMAG00000005871)	ENSSMAG00000016777	ENSSMAG00000016767	ENSSMAG00000037513	ENSSMAG00000003294	ENSSMAG00000036860	ENSSMAG00000003280	ENSSMAG00000029578	ENSSMAG00000005841 #22	ENSSMAG00000003271	ENSSMAG00000003149 #23	cog8 (ENSSMAG00000003121)	ENSSMAG00000003064	ENSSMAG00000002950	ENSSMAG00000002883	ENSSMAG00000023766	ENSSMAG00000037713	ENSSMAG00000023746	ENSSMAG00000033368	ENSSMAG00000002862	ENSSMAG00000002829	ENSSMAG00000002799	ENSSMAG00000002611	ENSSMAG00000002569
Tongue sole	MODERN SPECIES	15					ano1a (ENSCSEG00000019421)	ENSCSEG00000019456	ENSCSEG00000019467	gpn1 (ENSCSEG00000019468)	ENSCSEG00000019482	GTF2A2 (ENSCSEG00000019485)	ENSCSEG00000019487	FOXB1 (ENSCSEG00000019489)	ANXA2 (ENSCSEG00000019495)	ENSCSEG00000019503	ENSCSEG00000019512	KIFC3 (ENSCSEG00000019577) #22	katnb1 (ENSCSEG00000019627) #23	cog8 (ENSCSEG00000019649)	NOB1 (ENSCSEG00000019657)	WDR59 (ENSCSEG00000019664)	tbp (ENSCSEG00000019686)	psmc3 (ENSCSEG00000019695)	psmb1 (ENSCSEG00000000258)	phf10 (ENSCSEG00000000260)	rab4a (ENSCSEG00000000263)	ENSCSEG00000000265	ENSCSEG00000000266	ENSCSEG00000000268	smyd2a (ENSCSEG00000000269)	galnt2 (ENSCSEG00000000272)	urb2 (ENSCSEG00000000299)
Tiger tail seahorse	MODERN SPECIES	427	cebpg (ENSHCOG00000006847)	ENSHCOG00000006844	ENSHCOG00000006832	FHOD1 (ENSHCOG00000006822)	slc9a5 (ENSHCOG00000006798)	ENSHCOG00000006724	WDR59 (ENSHCOG00000006713)	NOB1 (ENSHCOG00000006699)	snrpa1 (ENSHCOG00000006689)	asb7 (ENSHCOG00000006663)	LRRK1 (ENSHCOG00000006625)	ENSHCOG00000006455	chsy1 (ENSHCOG00000006445)	ENSHCOG00000006432	ENSHCOG00000006403	KIFC3 (ENSHCOG00000006380) #22	katnb1 (ENSHCOG00000006257) #23	cog8 (ENSHCOG00000006219)	ENSHCOG00000006188	ENSHCOG00000006174	ENSHCOG00000006166	gpn1 (ENSHCOG00000006134)
Pinecone sodierfish	MODERN SPECIES	17	ano1a (ENSMMDG00005005605)	ENSMMDG00005005608	ENSMMDG00005005609	zgc:153993 (ENSMMDG00005005610)	fgf19 (ENSMMDG00005005612)	fgf4 (ENSMMDG00005005621)	fgf3 (ENSMMDG00005005681)	rassf7b (ENSMMDG00005005684)	BRSK2 (ENSMMDG00005005692)	ABTB2 (ENSMMDG00005005707)	ENSMMDG00005005956	ENSMMDG00005005960	large2 (ENSMMDG00005005984)	ENSMMDG00005006867	ENSMMDG00005006877	KIFC3 (ENSMMDG00005006899) #22	katnb1 (ENSMMDG00005007639) #23	cog8 (ENSMMDG00005007766)	NOB1 (ENSMMDG00005007768)	WDR59 (ENSMMDG00005007780)	tnni1b (ENSMMDG00005008667)	rab8b (ENSMMDG00005008680)	idh3a (ENSMMDG00005008694)	CIB2 (ENSMMDG00005009525)	ENSMMDG00005009526	hsd11b2 (ENSMMDG00005009527)	zdhhc1 (ENSMMDG00005009529)	ENSMMDG00005009531	dapk2a (ENSMMDG00005009532)	HERC1 (ENSMMDG00005009551)	ENSMMDG00005009777
Cod	MODERN SPECIES	5	prmt3 (ENSGMOG00000002570)	slc6a5 (ENSGMOG00000002626)	NELL1 (ENSGMOG00000031363)	ENSGMOG00000009277	ENSGMOG00000009383	ENSGMOG00000017397	ascl1b (ENSGMOG00000027313)	ENSGMOG00000017425	rassf7b (ENSGMOG00000023443)	ENSGMOG00000025653	ENSGMOG00000001091	ENSGMOG00000001070	ENSGMOG00000000810	large2 (ENSGMOG00000014703)	ENSGMOG00000026070	ENSGMOG00000012785 #22	ENSGMOG00000012781 #23	ENSGMOG00000008174	ENSGMOG00000008180	ENSGMOG00000008186	ENSGMOG00000032949	ENSGMOG00000008196	ENSGMOG00000003378	ENSGMOG00000028512	ENSGMOG00000003083	ENSGMOG00000003056	ENSGMOG00000035827	ENSGMOG00000033801	ENSGMOG00000030158	ENSGMOG00000010428	ENSGMOG00000010387
Protacanthopterygii	ANCESTRAL SPECIES	209								ENSGT00940000163916	ENSGT00950000182839.B.b.a	ENSGT00940000157462.C.c.a	ENSGT00940000157661.e.b	ENSGT00940000161238.l	ENSGT00940000165402	ENSGT00940000158758	ENSGT00940000162283.b	ENSGT00940000154022.a.a #22	ENSGT00940000157918 #23
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	597									ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000157661.e.b.g	ENSGT00940000161238.l.d	ENSGT00940000165402	ENSGT00940000158758.i	ENSGT00940000154824.h.a #20	ENSGT00940000154022.a.a.k #22	ENSGT00940000157918.o.b #23	ENSGT00390000008139.g	ENSGT00390000008184.d.b	ENSGT00950000183093.B.a.b.a	ENSGT00940000155663.f.b.k	ENSGT00940000158651.f	ENSGT00940000159533	ENSGT00530000063074.b.a.f
Salmoninae_a	ANCESTRAL SPECIES	131			ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000157661.e.b.g	ENSGT00940000161238.l.d	ENSGT00940000158758.i	ENSGT00940000154824.h.a #20	ENSGT00940000154022.a.a.k #22	ENSGT00940000157918.o.b #23	ENSGT00390000008139.g	ENSGT00390000008184.d.b	ENSGT00950000183093.B.a.b.a	ENSGT00940000155663.f.b.k	ENSGT00940000158651.f	ENSGT00940000159533	ENSGT00530000063074.b.a.f	ENSGT00940000160434.c	ENSGT00950000183151.a.a.a.c	ENSGT00390000018587.e.a	ENSGT00940000157760.g.a.a.a	ENSGT00940000162248.f	ENSGT00940000161285.b	ENSGT00940000156586.s.b
Salmo	ANCESTRAL SPECIES	27	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i.a	ENSGT00940000158287.h	ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000161238.l.d	ENSGT00940000158758.i	ENSGT00940000154824.h.a #20	ENSGT00940000154022.a.a.k #22	ENSGT00940000157918.o.b #23	ENSGT00390000008139.g	ENSGT00390000008184.d.b	ENSGT00950000183093.B.a.b.a	ENSGT00940000155663.f.b.k	ENSGT00940000158651.f	ENSGT00940000159533.k	ENSGT00530000063074.b.a.f	ENSGT00940000160434.c	ENSGT00950000183151.a.a.a.c	ENSGT00390000018587.e.a	ENSGT00940000157760.g.a.a.a	ENSGT00940000162248.f	ENSGT00940000161285.b	ENSGT00940000156586.s.b
River trout	MODERN SPECIES	3	MAPK8IP1 (ENSSTUG00000006698)	lrp4 (ENSSTUG00000006733)	ENSSTUG00000007403	NELL1 (ENSSTUG00000007502)	slc6a5 (ENSSTUG00000010531)	prmt3 (ENSSTUG00000012651)	slc39a1 (ENSSTUG00000012687)	ENSSTUG00000012701	CTTN (ENSSTUG00000012739)	ENSSTUG00000013013	rassf7b (ENSSTUG00000013048)	BRSK2 (ENSSTUG00000013107)	ENSSTUG00000013328	ENSSTUG00000013331	large2 (ENSSTUG00000013383)	KIFC3 (ENSSTUG00000014096) #22	katnb1 (ENSSTUG00000001204) #23	tmem208 (ENSSTUG00000001526)	ENSSTUG00000001730	htatip2 (ENSSTUG00000001957)	dbx1a (ENSSTUG00000001970)	NAV2 (ENSSTUG00000002093)	e2f8 (ENSSTUG00000004754)	csrp3 (ENSSTUG00000004795)	zdhhc13 (ENSSTUG00000004817)	tspan4a (ENSSTUG00000004958)	ddb1 (ENSSTUG00000004987)	TMEM138 (ENSSTUG00000005068)	cd151l (ENSSTUG00000005089)	KCNA4 (ENSSTUG00000005111)	fshb (ENSSTUG00000005114)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000103805	ENSSSAG00000040150	ENSSSAG00000047879	ENSSSAG00000048581	S39A1 (ENSSSAG00000048593)	ENSSSAG00000114542	ENSSSAG00000048604	ENSSSAG00000048727	ENSSSAG00000055872	ENSSSAG00000055972	ENSSSAG00000060109	ENSSSAG00000114815	ENSSSAG00000121702	CNGB1 (ENSSSAG00000061103) #20	ENSSSAG00000098372	ENSSSAG00000065270 #22	KATNB1 (ENSSSAG00000065351) #23	ENSSSAG00000103645	htatip2 (ENSSSAG00000065422)	dbx1a (ENSSSAG00000065425)	NAV2 (ENSSSAG00000065437)	e2f8 (ENSSSAG00000065538)	csrp3 (ENSSSAG00000065543)	zdhhc13 (ENSSSAG00000065559)	ENSSSAG00000107873	DDB1 (ENSSSAG00000065671)	ENSSSAG00000091559	ENSSSAG00000107500	ENSSSAG00000106295	ENSSSAG00000085468	ENSSSAG00000065711
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000159280.c.b	ENSGT00390000002768.a.c	ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q.a	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000157661.e.b.g	ENSGT00940000161238.l.d	ENSGT00940000158758.i	ENSGT00940000154824.h.a #20	ENSGT00940000154022.a.a.k #22	ENSGT00940000157918.o.b #23	ENSGT00390000008139.g	ENSGT00390000008184.d.b	ENSGT00950000183093.B.a.b.a	ENSGT00940000155663.f.b.k	ENSGT00940000158651.f	ENSGT00940000159533	ENSGT00530000063074.b.a.f	ENSGT00940000160434.c	ENSGT00950000183151.a.a.a.c	ENSGT00390000018587.e.a	ENSGT00940000157760.g.a.a.a	ENSGT00940000162248.f	ENSGT00940000161285.b	ENSGT00940000156586.s.b
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000159280.c.b	ENSGT00390000002768.a.c	ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q.a	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000157661.e.b.g	ENSGT00940000161238.l.d	ENSGT00940000158758.i	ENSGT00940000154824.h.a #20	ENSGT00940000154022.a.a.k #22	ENSGT00940000157918.o.b #23	ENSGT00390000008139.g	ENSGT00390000008184.d.b	ENSGT00950000183093.B.a.b.a	ENSGT00940000155663.f.b.k	ENSGT00940000158651.f	ENSGT00940000159533	ENSGT00530000063074.b.a.f	ENSGT00940000160434.c	ENSGT00950000183151.a.a.a.c	ENSGT00390000018587.e.a	ENSGT00940000157760.g.a.a.a	ENSGT00940000162248.f	ENSGT00940000161285.b	ENSGT00940000156586.s.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	3	wdr43 (ENSOTSG00005016679)	ENSOTSG00005017392	ENSOTSG00005017398	ENSOTSG00005017426	NELL1 (ENSOTSG00005017435)	slc6a5 (ENSOTSG00005017816)	prmt3 (ENSOTSG00005017865)	slc39a1 (ENSOTSG00005017869)	rlbp1a (ENSOTSG00005017872)	ENSOTSG00005017887	BRSK2 (ENSOTSG00005018157)	ENSOTSG00005018239	ENSOTSG00005018242	large2 (ENSOTSG00005018257)	CNGB1 (ENSOTSG00005020739) #20	KIFC3 (ENSOTSG00005023274) #22	katnb1 (ENSOTSG00005023439) #23	tmem208 (ENSOTSG00005023444)	htatip2 (ENSOTSG00005023447)	dbx1a (ENSOTSG00005023449)	ENSOTSG00005023452	e2f8 (ENSOTSG00005023453)	csrp3 (ENSOTSG00005023454)	zdhhc13 (ENSOTSG00005023458)	tspan4a (ENSOTSG00005023468)	ddb1 (ENSOTSG00005023483)	TMEM138 (ENSOTSG00005023498)	cd151l (ENSOTSG00005023499)	fshb (ENSOTSG00005023500)	arl14ep (ENSOTSG00005023501)	nr1h3 (ENSOTSG00005023506)
Chinook salmon	MODERN SPECIES	36	ENSOTSG00005046869	ENSOTSG00005046868	ENSOTSG00005046867	ENSOTSG00005046866	NELL1 (ENSOTSG00005046864)	slc6a5 (ENSOTSG00005046863)	prmt3 (ENSOTSG00005046862)	slc39a1 (ENSOTSG00005046861)	ENSOTSG00005046860	CTTN (ENSOTSG00005046745)	BRSK2 (ENSOTSG00005046703)	ENSOTSG00005046702	ENSOTSG00005046701	large2 (ENSOTSG00005046526)	CNGB1 (ENSOTSG00005046380) #20	KIFC3 (ENSOTSG00005046376) #22	katnb1 (ENSOTSG00005046352) #23	tmem208 (ENSOTSG00005046350)	htatip2 (ENSOTSG00005046344)	dbx1a (ENSOTSG00005046342)	e2f8 (ENSOTSG00005046335)	csrp3 (ENSOTSG00005046333)	zdhhc13 (ENSOTSG00005046328)	tspan4a (ENSOTSG00005046327)	ddb1 (ENSOTSG00005046280)	TMEM138 (ENSOTSG00005046278)	KCNA4 (ENSOTSG00005046277)	cd151l (ENSOTSG00005046276)	fshb (ENSOTSG00005046275)	nr1h3 (ENSOTSG00005046058)	arl14ep (ENSOTSG00005046056)
Coho salmon	MODERN SPECIES	28	spdya (ENSOKIG00005043496)	trmt61b (ENSOKIG00005043526)	wdr43 (ENSOKIG00005012656)	ENSOKIG00005012941	ENSOKIG00005012980	NELL1 (ENSOKIG00005013054)	slc6a5 (ENSOKIG00005013972)	ENSOKIG00005014814	CTTN (ENSOKIG00005014920)	ENSOKIG00005016375	rassf7b (ENSOKIG00005016418)	BRSK2 (ENSOKIG00005016459)	ENSOKIG00005017062	ENSOKIG00005017076	LARGE2 (ENSOKIG00005017131)	KIFC3 (ENSOKIG00005017458) #22	katnb1 (ENSOKIG00005017569) #23	TMEM208 (ENSOKIG00005017671)	htatip2 (ENSOKIG00005017682)	dbx1a (ENSOKIG00005017687)	NAV2 (ENSOKIG00005017723)	e2f8 (ENSOKIG00005018575)	csrp3 (ENSOKIG00005018606)	zdhhc13 (ENSOKIG00005018624)	TSPAN4 (ENSOKIG00005018689)	ddb1 (ENSOKIG00005018754)	TMEM138 (ENSOKIG00005019077)	CD151 (ENSOKIG00005019101)	KCNA4 (ENSOKIG00005019148)	arl14ep (ENSOKIG00005019153)	nr1h3 (ENSOKIG00005019181)
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000043118	ENSOMYG00000050705	ENSOMYG00000043129	ENSOMYG00000043183	ENSOMYG00000043730	ENSOMYG00000058633	ENSOMYG00000043799	ENSOMYG00000043889	ENSOMYG00000043898	large2 (ENSOMYG00000043972)	ENSOMYG00000057544	ENSOMYG00000050380	ENSOMYG00000067492	ENSOMYG00000053205	ENSOMYG00000074483	ENSOMYG00000044451 #22	ENSOMYG00000044529 #23	ENSOMYG00000044551	htatip2 (ENSOMYG00000023004)	dbx1a (ENSOMYG00000023009)	NAV2 (ENSOMYG00000023295)	e2f8 (ENSOMYG00000024769)	csrp3 (ENSOMYG00000024808)	zdhhc13 (ENSOMYG00000024936)	ENSOMYG00000025282	ENSOMYG00000058196	ENSOMYG00000025442	ENSOMYG00000025597	ENSOMYG00000025621	ENSOMYG00000055598	ENSOMYG00000025664
Huchen	MODERN SPECIES	579											BRSK2 (ENSHHUG00000012607)	ABTB2 (ENSHHUG00000012616)	ENSHHUG00000012666	large2 (ENSHHUG00000012673)	CNGB1 (ENSHHUG00000013289) #20	KIFC3 (ENSHHUG00000013457) #22	katnb1 (ENSHHUG00000013596) #23	tmem208 (ENSHHUG00000013676)	htatip2 (ENSHHUG00000013679)	dbx1a (ENSHHUG00000013680)	NAV2 (ENSHHUG00000013688)
Salmoninae	ANCESTRAL SPECIES	46														ENSGT00940000158758.j	ENSGT00940000162283.b	ENSGT00940000154022.a.a.l #22	ENSGT00940000157918.o.a #23	ENSGT00390000008139.h	ENSGT00390000008184.d.a	ENSGT00950000183093.B.a.b.b	ENSGT00940000155663.f.b.l	ENSGT00940000158651.e	ENSGT00530000063074.b.a.e	ENSGT01100000263521.a.a.b.a.a.d.b.a	ENSGT00940000160434.d	ENSGT00950000183151.a.a.a.d	ENSGT00390000018587.e.b	ENSGT00940000157760.g.a.a.b	ENSGT00940000162248.e	ENSGT00970000195769	ENSGT00940000156586.s.a
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j	ENSGT00940000162283.b	ENSGT00940000154022.a.a.l #22	ENSGT00940000157918.o.a #23	ENSGT00390000008139.h	ENSGT00390000008184.d.a	ENSGT00950000183093.B.a.b.b	ENSGT00940000155663.f.b.l	ENSGT00940000158651.e	ENSGT00530000063074.b.a.e	ENSGT01100000263521.a.a.b.a.a.d.b.a	ENSGT00940000160434.d	ENSGT00950000183151.a.a.a.d	ENSGT00390000018587.e.b	ENSGT00940000157760.g.a.a.b	ENSGT00940000162248.e	ENSGT00970000195769	ENSGT00940000156586.s.a
Salmo	ANCESTRAL SPECIES	30	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00960000187709	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j	ENSGT00940000162283.b	ENSGT00940000154022.a.a.l #22	ENSGT00940000157918.o.a #23	ENSGT00390000008139.h	ENSGT00390000008184.d.a	ENSGT00950000183093.B.a.b.b	ENSGT00940000155663.f.b.l	ENSGT00940000158651.e	ENSGT00940000159533.l	ENSGT00530000063074.b.a.e	ENSGT01100000263521.a.a.b.a.a.d.b.a	ENSGT00940000160434.d	ENSGT00950000183151.a.a.a.d	ENSGT00390000018587.e.b.a	ENSGT00940000157760.g.a.a.b	ENSGT00940000162248.e	ENSGT00970000195769
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000071775	slc6a5 (ENSSSAG00000072543)	prmt3 (ENSSSAG00000072690)	ENSSSAG00000098754	ENSSSAG00000072744	ENSSSAG00000104665	ENSSSAG00000088498	ENSSSAG00000073025	rassf7 (ENSSSAG00000073026)	ENSSSAG00000073034	ENSSSAG00000073059	ENSSSAG00000073065	ENSSSAG00000115408	large2 (ENSSSAG00000083863)	ENSSSAG00000073676	ENSSSAG00000073693 #22	ENSSSAG00000073742 #23	ENSSSAG00000089695	htatip2 (ENSSSAG00000094219)	dbx1a (ENSSSAG00000115224)	NAV2 (ENSSSAG00000073846)	e2f8 (ENSSSAG00000073983)	csrp3 (ENSSSAG00000073986)	zdh13 (ENSSSAG00000073989)	ENSSSAG00000115336	ENSSSAG00000073998	ENSSSAG00000074001	ddb1 (ENSSSAG00000074018)	ENSSSAG00000087197	ENSSSAG00000065694	ENSSSAG00000084029
River trout	MODERN SPECIES	21	lrp4 (ENSSTUG00000018050)	ENSSTUG00000017807	NELL1 (ENSSTUG00000016334)	slc6a5 (ENSSTUG00000015956)	prmt3 (ENSSTUG00000015845)	slc39a1 (ENSSTUG00000015833)	CTTN (ENSSTUG00000015533)	ENSSTUG00000015519	ENSSTUG00000015498	ENSSTUG00000015490	rassf7b (ENSSTUG00000015487)	BRSK2 (ENSSTUG00000014505)	ABTB2 (ENSSTUG00000014441)	ENSSTUG00000014370	large2 (ENSSTUG00000013070)	KIFC3 (ENSSTUG00000012857) #22	katnb1 (ENSSTUG00000012528) #23	tmem208 (ENSSTUG00000012481)	ENSSTUG00000012477	htatip2 (ENSSTUG00000012471)	dbx1a (ENSSTUG00000012458)	ENSSTUG00000012288	ENSSTUG00000012279	e2f8 (ENSSTUG00000012229)	zdhhc13 (ENSSTUG00000012117)	ENSSTUG00000012101	tspan4a (ENSSTUG00000012081)	ddb1 (ENSSTUG00000011797)	TMEM138 (ENSSTUG00000011786)	cd151l (ENSSTUG00000011751)	ENSSTUG00000011724
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j	ENSGT00940000162283.b	ENSGT00940000154022.a.a.l #22	ENSGT00940000157918.o.a #23	ENSGT00390000008139.h	ENSGT00390000008184.d.a	ENSGT00950000183093.B.a.b.b	ENSGT00940000158651.e	ENSGT00530000063074.b.a.e	ENSGT01100000263521.a.a.b.a.a.d.b.a	ENSGT00940000160434.d	ENSGT00950000183151.a.a.a.d	ENSGT00390000018587.e.b	ENSGT00940000157760.g.a.a.b	ENSGT00940000162248.e	ENSGT00970000195769	ENSGT00940000156586.t	ENSGT01030000239319
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000005965	slc6a5 (ENSOMYG00000008086)	prmt3 (ENSOMYG00000008629)	ENSOMYG00000008738	ENSOMYG00000009421	ENSOMYG00000077344	ENSOMYG00000074580	ENSOMYG00000011052	rassf7b (ENSOMYG00000011058)	ENSOMYG00000011125	ENSOMYG00000011342	ENSOMYG00000011348	ENSOMYG00000011375	large2 (ENSOMYG00000011458)	ENSOMYG00000059686	ENSOMYG00000012787 #22	ENSOMYG00000012883 #23	ENSOMYG00000012984	htatip2 (ENSOMYG00000012993)	dbx1a (ENSOMYG00000013003)	ENSOMYG00000013588	e2f8 (ENSOMYG00000013593)	ENSOMYG00000013635	ENSOMYG00000013691	ENSOMYG00000013703	ENSOMYG00000013736	ENSOMYG00000013786	ENSOMYG00000072357	ENSOMYG00000013802	ENSOMYG00000013807	ENSOMYG00000013821
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j	ENSGT00940000162283.b	ENSGT00940000154022.a.a.l #22	ENSGT00940000157918.o.a #23	ENSGT00390000008139.h	ENSGT00390000008184.d.a	ENSGT00950000183093.B.a.b.b	ENSGT00940000158651.e	ENSGT00530000063074.b.a.e	ENSGT01100000263521.a.a.b.a.a.d.b.a	ENSGT00940000160434.d	ENSGT00950000183151.a.a.a.d	ENSGT00390000018587.e.b	ENSGT00940000157760.g.a.a.b	ENSGT00940000162248.e	ENSGT00970000195769	ENSGT00940000156586.t	ENSGT00940000159068.f
Coho salmon	MODERN SPECIES	22	lrp4 (ENSOKIG00005000443)	ENSOKIG00005000939	NELL1 (ENSOKIG00005001201)	slc6a5 (ENSOKIG00005001966)	prmt3 (ENSOKIG00005002480)	slc39a1 (ENSOKIG00005002802)	CTTN (ENSOKIG00005002872)	ENSOKIG00005003325	ENSOKIG00005003330	rassf7b (ENSOKIG00005003332)	BRSK2 (ENSOKIG00005003392)	ABTB2 (ENSOKIG00005003513)	ENSOKIG00005003542	large2 (ENSOKIG00005003653)	ENSOKIG00005004578	KIFC3 (ENSOKIG00005004741) #22	KATNB1 (ENSOKIG00005005069) #23	tmem208 (ENSOKIG00005005096)	htatip2 (ENSOKIG00005005108)	dbx1a (ENSOKIG00005005116)	e2f8 (ENSOKIG00005005287)	ENSOKIG00005005327	ENSOKIG00005005352	ENSOKIG00005005384	TSPAN4 (ENSOKIG00005005395)	DDB1 (ENSOKIG00005005455)	TMEM138 (ENSOKIG00005005881)	CD151 (ENSOKIG00005005904)	KCNA4 (ENSOKIG00005005920)	ENSOKIG00005005927	ENSOKIG00005005939
Chinook salmon	MODERN SPECIES	28	lrp4 (ENSOTSG00005026127)	ENSOTSG00005026254	NELL1 (ENSOTSG00005026432)	slc6a5 (ENSOTSG00005026444)	prmt3 (ENSOTSG00005026449)	slc39a1 (ENSOTSG00005026450)	CTTN (ENSOTSG00005026451)	ENSOTSG00005026454	ENSOTSG00005026458	ENSOTSG00005026462	rassf7b (ENSOTSG00005026464)	BRSK2 (ENSOTSG00005026467)	ABTB2 (ENSOTSG00005026599)	ENSOTSG00005026602	large2 (ENSOTSG00005026604)	KIFC3 (ENSOTSG00005026611) #22	katnb1 (ENSOTSG00005026616) #23	tmem208 (ENSOTSG00005026650)	htatip2 (ENSOTSG00005026651)	dbx1a (ENSOTSG00005026652)	e2f8 (ENSOTSG00005026656)	zdhhc13 (ENSOTSG00005026660)	ENSOTSG00005026662	TSPAN4 (ENSOTSG00005026664)	ENSOTSG00005026666	ddb1 (ENSOTSG00005026672)	TMEM138 (ENSOTSG00005026728)	cd151l (ENSOTSG00005026729)	ENSOTSG00005026730	KCNA4 (ENSOTSG00005019159)	ENSOTSG00005019161
Huchen	MODERN SPECIES	11														large2 (ENSHHUG00000021412)	CNGB1 (ENSHHUG00000021889) #20	KIFC3 (ENSHHUG00000022014) #22	katnb1 (ENSHHUG00000022034) #23	tmem208 (ENSHHUG00000022139)	htatip2 (ENSHHUG00000022151)	dbx1a (ENSHHUG00000022156)	NAV2 (ENSHHUG00000022183)	e2f8 (ENSHHUG00000022250)	ENSHHUG00000022260	zdhhc13 (ENSHHUG00000022268)	ENSHHUG00000022318	tspan4a (ENSHHUG00000022325)	ddb1 (ENSHHUG00000022344)	TMEM138 (ENSHHUG00000022406)	cd151l (ENSHHUG00000022414)	nptx2a (ENSHHUG00000022418)	baiap2l1b (ENSHHUG00000022427)
Northern pike	MODERN SPECIES	1					prmt3 (ENSELUG00000010394)	slc6a5 (ENSELUG00000010462)	ENSELUG00000025500	NELL1 (ENSELUG00000033782)	ENSELUG00000029351	NELL1 (ENSELUG00000033709)	lrp4 (ENSELUG00000020139)	slc39a1 (ENSELUG00000005102)	rlbp1a (ENSELUG00000005140)	ENSELUG00000030898	CNGB1 (ENSELUG00000006187) #20	KIFC3 (ENSELUG00000006152) #22	katnb1 (ENSELUG00000006019) #23	ENSELUG00000032580	large2 (ENSELUG00000005919)	ENSELUG00000034292	ENSELUG00000020458	ENSELUG00000026812	ABTB2 (ENSELUG00000020381)	BRSK2 (ENSELUG00000020335)	rassf7b (ENSELUG00000020174)	ENSELUG00000027020	ENSELUG00000005757	CTTN (ENSELUG00000005683)	tmem208 (ENSELUG00000005646)	htatip2 (ENSELUG00000005617)	dbx1a (ENSELUG00000024596)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	131	ENSGT00940000171971	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a.o	ENSGT00950000183051.b.a.a	ENSGT00530000063023.A.a.i	ENSGT00940000164020.a	ENSGT00950000183156.a.a.a	ENSGT00940000154285.b.a.a.b ##25	ENSGT00940000156113	ENSGT00390000015672	ENSGT00940000167365	ENSGT00940000166567	ENSGT00940000156939.h #16	ENSGT00940000162283.b	ENSGT00940000154022.a.a.m #22	ENSGT00940000156252.ob.b	ENSGT00940000158136	ENSGT00950000183108.b.a.a.j	ENSGT00950000182991.A.a.c.b.d	ENSGT00950000183131.b.b.b	ENSGT00940000157764.e.a	ENSGT00940000158494	ENSGT00530000063853.a.b.a	ENSGT00510000047791.g	ENSGT00510000047030.d.d	ENSGT00390000006585.b	ENSGT00390000003044	ENSGT00940000156501	ENSGT00940000174693.d
P. kingsleyae	MODERN SPECIES	10	ccne1 (ENSPKIG00000004378)	uri1 (ENSPKIG00000004345)	ZNF536 (ENSPKIG00000004247)	tshz3b (ENSPKIG00000004187)	DPY19L3 (ENSPKIG00000004045)	ENSPKIG00000003930	mtss1la (ENSPKIG00000003850)	DOK4 (ENSPKIG00000003786) #29	adgrg1 (ENSPKIG00000003742) ##25	ENSPKIG00000003679	slc7a6os (ENSPKIG00000003646)	zpd (ENSPKIG00000003623)	ENSPKIG00000003570	MMP15 (ENSPKIG00000003509) #16	ENSPKIG00000003461	KIFC3 (ENSPKIG00000003347) #22	ENSPKIG00000003295	ENSPKIG00000003285	ENSPKIG00000003274	e2f4 (ENSPKIG00000003228)	cnot1 (ENSPKIG00000002914) #7	si:ch211-122f10.4 (ENSPKIG00000002800)	ENSPKIG00000002753	slc38a7 (ENSPKIG00000002694)	ENSPKIG00000002676	GOT2 (ENSPKIG00000002625)	CALB2 (ENSPKIG00000002590)	pnp6 (ENSPKIG00000002570)	ENSPKIG00000002557	NECAB2 (ENSPKIG00000002529)	SLC38A8 (ENSPKIG00000002452)
Asian bonytongue	MODERN SPECIES		ENSSFOG00015032308	DPY19L3 (ENSSFOG00015014763)	ENSSFOG00015014867	ENSSFOG00015026843	ENSSFOG00015014949	ENSSFOG00015014973 #25	CCDC102A (ENSSFOG00015014984) ##28	adgrg1 (ENSSFOG00015015001) ##25	ENSSFOG00015015021	ENSSFOG00015030328	slc7a6os (ENSSFOG00015030815)	zpd (ENSSFOG00015015067)	ENSSFOG00015015088	MMP15 (ENSSFOG00015015101) #16	ENSSFOG00015015146	KIFC3 (ENSSFOG00015015376) #22	ENSSFOG00015032328	ENSSFOG00015030986	ENSSFOG00015015543	e2f4 (ENSSFOG00015015554)	si:ch211-122f10.4 (ENSSFOG00015015578)	ENSSFOG00015015676	slc38a7 (ENSSFOG00015016162)	got2a (ENSSFOG00015005990)	calb2a (ENSSFOG00015010665)	pnp6 (ENSSFOG00015010688)	ENSSFOG00015010710	SLC38A8 (ENSSFOG00015031580)	ENSSFOG00015010754	ENSSFOG00015010776	NRN1L (ENSSFOG00015028953)
Osteoglossiformes	ANCESTRAL SPECIES	26	ENSGT00390000001014	ENSGT00940000161356.b	ENSGT00390000006020	ENSGT00940000156397.a.a.p	ENSGT00950000183051.b.a.b	ENSGT00490000043434	ENSGT00530000063023.A.a.j	ENSGT00940000164020.b	ENSGT00950000183156.a.a.b	ENSGT00390000008385	ENSGT00940000160143 #29	ENSGT00730000110960.b ##28	ENSGT00940000158295	ENSGT00940000156939.g #16	ENSGT00940000162283.a	ENSGT00940000154022.a.a.n #22	ENSGT00940000157918 #23	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252.ob.a	ENSGT00940000163301.c.a	ENSGT00940000153577.C #8	ENSGT00390000014869 #7	ENSGT00880000138014.a	ENSGT00940000154294	ENSGT00990000203851	ENSGT00950000183082.a	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000182991.A.a.c.b.c	ENSGT00940000161773
Asian bonytongue	MODERN SPECIES	22	zgc:162297 (ENSSFOG00015018668)	ZNF536 (ENSSFOG00015018624)	tshz3b (ENSSFOG00015018612)	ZNF507 (ENSSFOG00015018602)	DPY19L3 (ENSSFOG00015018564)	ENSSFOG00015018512	mtss1la (ENSSFOG00015018457)	vac14 (ENSSFOG00015018367)	IFT74 (ENSSFOG00015028634)	DOK4 (ENSSFOG00015018326) #29	ccdc102a (ENSSFOG00015018299) ##28	slc7a6 (ENSSFOG00015018261)	katnb1 (ENSSFOG00015018207) #23	MMP15 (ENSSFOG00015018155) #16	ENSSFOG00015018090	KIFC3 (ENSSFOG00015018005) #22	tmem208 (ENSSFOG00015017960)	ENSSFOG00015017929	ELMO3 (ENSSFOG00015017838)	e2f4 (ENSSFOG00015017784)	si:dkey-286h2.3 (ENSSFOG00015017746)	setd6 (ENSSFOG00015017688) #8	cnot1 (ENSSFOG00015017614) #7	ENSSFOG00015017567	CALB2 (ENSSFOG00015017521)	pnp6 (ENSSFOG00015017494)	cmtr2 (ENSSFOG00015028047)	hydin (ENSSFOG00015033190)	necab2 (ENSSFOG00015014647)	SLC38A8 (ENSSFOG00015014609)	OSGIN1 (ENSSFOG00015014542)
P. kingsleyae	MODERN SPECIES	23												ccdc102a (ENSPKIG00000023041) ##28	slc7a6 (ENSPKIG00000023084)	MMP15 (ENSPKIG00000023125) #16	ENSPKIG00000023155	KIFC3 (ENSPKIG00000023180) #22	katnb1 (ENSPKIG00000023208) #23	tmem208 (ENSPKIG00000023228)	ENSPKIG00000023243	ELMO3 (ENSPKIG00000023256)	ENSPKIG00000023273	e2f4 (ENSPKIG00000023286)	si:dkey-286h2.3 (ENSPKIG00000023336)	setd6 (ENSPKIG00000023460) #8	cnot1 (ENSPKIG00000023538) #7	ENSPKIG00000023666	ENSPKIG00000023683	calb2b (ENSPKIG00000023716)	pnp6 (ENSPKIG00000023736)	cmtr2 (ENSPKIG00000023749)	hydin (ENSPKIG00000000601)
Spotted gar	MODERN SPECIES	662	DPY19L3 (ENSLOCG00000005805)	ENSLOCG00000005823	ENSLOCG00000005856	vac14 (ENSLOCG00000005906)	DOK4 (ENSLOCG00000005930) #29	ccdc102a (ENSLOCG00000005943) ##28	ENSLOCG00000005960 ##25	ENSLOCG00000005977	slc7a6 (ENSLOCG00000005997)	ENSLOCG00000006022	ENSLOCG00000006041	ENSLOCG00000006054 ##25	ENSLOCG00000006072 ##25	MMP15 (ENSLOCG00000006100) #16	ENSLOCG00000006113	KIFC3 (ENSLOCG00000006130) #22	katnb1 (ENSLOCG00000006166) #23	tmem208 (ENSLOCG00000006204)	ENSLOCG00000006224	ELMO3 (ENSLOCG00000006255)	e2f4 (ENSLOCG00000006277)	si:dkey-286h2.3 (ENSLOCG00000006287)	setd6 (ENSLOCG00000006305) #8	cnot1 (ENSLOCG00000006324) #7	si:ch211-122f10.4 (ENSLOCG00000006351)	ENSLOCG00000006377	slc38a7 (ENSLOCG00000006410)	ENSLOCG00000006435	got2a (ENSLOCG00000006474)	calb2a (ENSLOCG00000006495)	pnp6 (ENSLOCG00000006511)
Elephant shark	MODERN SPECIES	1612	B3GNT9 (ENSCMIG00000006910)	prmt7 (ENSCMIG00000006894)	smpd3 (ENSCMIG00000006883)	ENSCMIG00000006880	PDPR (ENSCMIG00000006874)	glg1b (ENSCMIG00000006805)	RFWD3 (ENSCMIG00000006758)	ENSCMIG00000006748	WDR59 (ENSCMIG00000006654)	ENSCMIG00000006634	slc7a6 (ENSCMIG00000006624)	ENSCMIG00000006616	ENSCMIG00000006615	MMP15 (ENSCMIG00000006586) #16	ENSCMIG00000006564	KIFC3 (ENSCMIG00000006506) #22	katnb1 (ENSCMIG00000006301) #23	ENSCMIG00000006250	ENSCMIG00000006247	ENSCMIG00000006241 #18	ENSCMIG00000006238 #12	ENSCMIG00000006218 #14	ENSCMIG00000006202	gins3 (ENSCMIG00000006197) #10	ndrg4 (ENSCMIG00000006146) #9	bbs2 (ENSCMIG00000006105)	amfra (ENSCMIG00000005868)	nudt21 (ENSCMIG00000005752)	ogfod1 (ENSCMIG00000005726)	ENSCMIG00000005711	ENSCMIG00000005705