Glires	ANCESTRAL SPECIES	16	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Murinae	ANCESTRAL SPECIES		ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Mus	ANCESTRAL SPECIES		ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Ryukyu mouse	MODERN SPECIES	10	Exosc1 (MGP_CAROLIEiJ_G0022959) #7	Zdhhc16 (MGP_CAROLIEiJ_G0022960) #8	Mms19 (MGP_CAROLIEiJ_G0022961) #9	Ubtd1 (MGP_CAROLIEiJ_G0022962) #10	Ankrd2 (MGP_CAROLIEiJ_G0022963) #11	Hoga1 (MGP_CAROLIEiJ_G0022964) #12	4933411K16Rik (MGP_CAROLIEiJ_G0022965) #13	Morn4 (MGP_CAROLIEiJ_G0022966) #14	Pi4k2a (MGP_CAROLIEiJ_G0022967) #15	Avpi1 (MGP_CAROLIEiJ_G0022968) #16	Marveld1 (MGP_CAROLIEiJ_G0022969) #17	Zfyve27 (MGP_CAROLIEiJ_G0022970) #18	Sfrp5 (MGP_CAROLIEiJ_G0022971) #19	Golga7b (MGP_CAROLIEiJ_G0022972) #20	Crtac1 (MGP_CAROLIEiJ_G0022973) #21	R3hcc1l (MGP_CAROLIEiJ_G0022974) #22	Loxl4 (MGP_CAROLIEiJ_G0022975) #23	Pyroxd2 (MGP_CAROLIEiJ_G0022976) #24	Hps1 (MGP_CAROLIEiJ_G0022977) #25	Hpse2 (MGP_CAROLIEiJ_G0022978) #26	Cnnm1 (MGP_CAROLIEiJ_G0022979) #27	Got1 (MGP_CAROLIEiJ_G0022980) #28	Nkx2-3 (MGP_CAROLIEiJ_G0022981) #29	Slc25a28 (MGP_CAROLIEiJ_G0022982) #30	Entpd7 (MGP_CAROLIEiJ_G0022983) #31	Cox15 (MGP_CAROLIEiJ_G0022984) #32	Cutc (MGP_CAROLIEiJ_G0022985) #33	Abcc2 (MGP_CAROLIEiJ_G0022986) #34	Dnmbp (MGP_CAROLIEiJ_G0022987) #35	Cpn1 (MGP_CAROLIEiJ_G0022988) #36	Cyp2c23 (MGP_CAROLIEiJ_G0022989) #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Mouse	MODERN SPECIES	10	Exosc1 (ENSMUSG00000034321) #7	Zdhhc16 (ENSMUSG00000025157) #8	Mms19 (ENSMUSG00000025159) #9	Ubtd1 (ENSMUSG00000025171) #10	Ankrd2 (ENSMUSG00000025172) #11	Hoga1 (ENSMUSG00000025176) #12	4933411K16Rik (ENSMUSG00000090369) #13	Morn4 (ENSMUSG00000049670) #14	Pi4k2a (ENSMUSG00000025178) #15	Avpi1 (ENSMUSG00000018821) #16	Marveld1 (ENSMUSG00000044345) #17	Zfyve27 (ENSMUSG00000018820) #18	Sfrp5 (ENSMUSG00000018822) #19	Golga7b (ENSMUSG00000042532) #20	Crtac1 (ENSMUSG00000042401) #21	R3hcc1l (ENSMUSG00000025184) #22	Loxl4 (ENSMUSG00000025185) #23	Pyroxd2 (ENSMUSG00000060224) #24	Hps1 (ENSMUSG00000025188) #25	Hpse2 (ENSMUSG00000074852) #26	Cnnm1 (ENSMUSG00000025189) #27	Got1 (ENSMUSG00000025190) #28	Nkx2-3 (ENSMUSG00000044220) #29	Slc25a28 (ENSMUSG00000040414) #30	Entpd7 (ENSMUSG00000025192) #31	Cox15 (ENSMUSG00000040018) #32	Cutc (ENSMUSG00000025193) #33	Abcc2 (ENSMUSG00000025194) #34	Dnmbp (ENSMUSG00000025195) #35	Cpn1 (ENSMUSG00000025196) #36	Cyp2c23 (ENSMUSG00000025197) #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00950000182926.b.d.d	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Steppe mouse	MODERN SPECIES	3102	Exosc1 (ENSMSIG00000015679) #7	Zdhhc16 (ENSMSIG00000015766) #8	Mms19 (ENSMSIG00000015819) #9	Ubtd1 (ENSMSIG00000016084) #10	Ankrd2 (ENSMSIG00000016098) #11	Hoga1 (ENSMSIG00000016124) #12	Morn4 (ENSMSIG00000016140) #14	Pi4k2a (ENSMSIG00000016167) #15	Avpi1 (ENSMSIG00000016198) #16	Marveld1 (ENSMSIG00000016215) #17	ENSMSIG00000016220	Zfyve27 (ENSMSIG00000016227) #18	Sfrp5 (ENSMSIG00000016290) #19	ENSMSIG00000016305 #20	Crtac1 (ENSMSIG00000016325) #21	R3hcc1l (ENSMSIG00000016349) #22	Loxl4 (ENSMSIG00000016394) #23	Pyroxd2 (ENSMSIG00000016509) #24	Hps1 (ENSMSIG00000016547) #25	ENSMSIG00000016731 #26
spretus	MODERN SPECIES	10	Exosc1 (MGP_SPRETEiJ_G0023880) #7	Zdhhc16 (MGP_SPRETEiJ_G0023881) #8	Mms19 (MGP_SPRETEiJ_G0023882) #9	Ubtd1 (MGP_SPRETEiJ_G0023883) #10	Ankrd2 (MGP_SPRETEiJ_G0023884) #11	Hoga1 (MGP_SPRETEiJ_G0023885) #12	4933411K16Rik (MGP_SPRETEiJ_G0023886) #13	Morn4 (MGP_SPRETEiJ_G0023887) #14	Pi4k2a (MGP_SPRETEiJ_G0023888) #15	Avpi1 (MGP_SPRETEiJ_G0023889) #16	Marveld1 (MGP_SPRETEiJ_G0023890) #17	Zfyve27 (MGP_SPRETEiJ_G0023891) #18	Sfrp5 (MGP_SPRETEiJ_G0023892) #19	Golga7b (MGP_SPRETEiJ_G0023893) #20	Crtac1 (MGP_SPRETEiJ_G0023894) #21	R3hcc1l (MGP_SPRETEiJ_G0023895) #22	Loxl4 (MGP_SPRETEiJ_G0023896) #23	Pyroxd2 (MGP_SPRETEiJ_G0023897) #24	Hps1 (MGP_SPRETEiJ_G0023898) #25	Hpse2 (MGP_SPRETEiJ_G0023899) #26	Cnnm1 (MGP_SPRETEiJ_G0023900) #27	Got1 (MGP_SPRETEiJ_G0023901) #28	Nkx2-3 (MGP_SPRETEiJ_G0023902) #29	Slc25a28 (MGP_SPRETEiJ_G0023903) #30	Entpd7 (MGP_SPRETEiJ_G0023904) #31	Cox15 (MGP_SPRETEiJ_G0023905) #32	Cutc (MGP_SPRETEiJ_G0023906) #33	Abcc2 (MGP_SPRETEiJ_G0023907) #34	Dnmbp (MGP_SPRETEiJ_G0023908) #35	Cpn1 (MGP_SPRETEiJ_G0023909) #36	Cyp2c23 (MGP_SPRETEiJ_G0023910) #37
Shrew mouse	MODERN SPECIES		Exosc1 (MGP_PahariEiJ_G0014449) #7	Zdhhc16 (MGP_PahariEiJ_G0014450) #8	Mms19 (MGP_PahariEiJ_G0014451) #9	Ubtd1 (MGP_PahariEiJ_G0014452) #10	Ankrd2 (MGP_PahariEiJ_G0014453) #11	Hoga1 (MGP_PahariEiJ_G0014454) #12	4933411K16Rik (MGP_PahariEiJ_G0014455) #13	Morn4 (MGP_PahariEiJ_G0014456) #14	Pi4k2a (MGP_PahariEiJ_G0014457) #15	Avpi1 (MGP_PahariEiJ_G0014458) #16	Marveld1 (MGP_PahariEiJ_G0014459) #17	Zfyve27 (MGP_PahariEiJ_G0014460) #18	Sfrp5 (MGP_PahariEiJ_G0014461) #19	Golga7b (MGP_PahariEiJ_G0014462) #20	Crtac1 (MGP_PahariEiJ_G0014463) #21	R3hcc1l (MGP_PahariEiJ_G0014464) #22	Loxl4 (MGP_PahariEiJ_G0014465) #23	Pyroxd2 (MGP_PahariEiJ_G0014466) #24	Hps1 (MGP_PahariEiJ_G0014467) #25	Hpse2 (MGP_PahariEiJ_G0014468) #26	Cnnm1 (MGP_PahariEiJ_G0014469) #27	Got1 (MGP_PahariEiJ_G0014470) #28	Nkx2-3 (MGP_PahariEiJ_G0014471) #29	Slc25a28 (MGP_PahariEiJ_G0014472) #30	Entpd7 (MGP_PahariEiJ_G0014473) #31	Cox15 (MGP_PahariEiJ_G0014474) #32	Cutc (MGP_PahariEiJ_G0014475) #33	Abcc2 (MGP_PahariEiJ_G0014476) #34	Dnmbp (MGP_PahariEiJ_G0014477) #35	Cpn1 (MGP_PahariEiJ_G0014478) #36	Cyp2c23 (MGP_PahariEiJ_G0014479) #37
Rat	MODERN SPECIES		Zdhhc16 (ENSRNOG00000046530) #8	Mms19 (ENSRNOG00000046769) #9	Ubtd1 (ENSRNOG00000013813) #10	Ankrd2 (ENSRNOG00000013840) #11	Hoga1 (ENSRNOG00000029501) #12	MGC93861 (ENSRNOG00000069762) #13	Morn4 (ENSRNOG00000027156) #14	Pi4k2a (ENSRNOG00000014675) #15	Avpi1 (ENSRNOG00000014828) #16	Marveld1 (ENSRNOG00000042620)	Zfyve27 (ENSRNOG00000014903) #18	Sfrp5 (ENSRNOG00000014940) #19	AABR07006871.1 (ENSRNOG00000053536)	Golga7b (ENSRNOG00000015051) #20	Crtac1 (ENSRNOG00000015220) #21	R3hcc1l (ENSRNOG00000051256) #22	Loxl4 (ENSRNOG00000015727) #23	Pyroxd2 (ENSRNOG00000015807) #24	Hps1 (ENSRNOG00000045838) #25	Hpse2 (ENSRNOG00000064037) #26	ENSRNOG00000065211	Cnnm1 (ENSRNOG00000016302) #27	Got1 (ENSRNOG00000016356) #28	Nkx2-3 (ENSRNOG00000016656) #29	Slc25a28 (ENSRNOG00000016751) #30	Entpd7 (ENSRNOG00000016883) #31	Cox15 (ENSRNOG00000017230) #32	Cutc (ENSRNOG00000017298) #33	Abcc2 (ENSRNOG00000046727) #34	Dnmbp (ENSRNOG00000050742) #35	Cpn1 (ENSRNOG00000013439) #36
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00390000015820 #13	ENSGT00530000063604.A #12	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00950000182926.b.d.d	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Northern American deer mouse	MODERN SPECIES		Pgam1 (ENSPEMG00000012759)	Exosc1 (ENSPEMG00000010710) #7	Zdhhc16 (ENSPEMG00000007675) #8	Mms19 (ENSPEMG00000013174) #9	Ubtd1 (ENSPEMG00000024360) #10	Ankrd2 (ENSPEMG00000013562) #11	Hoga1 (ENSPEMG00000014860) #12	Morn4 (ENSPEMG00000027726) #14	Pi4k2a (ENSPEMG00000016260) #15	Avpi1 (ENSPEMG00000011234) #16	Marveld1 (ENSPEMG00000000505) #17	Zfyve27 (ENSPEMG00000000658) #18	Sfrp5 (ENSPEMG00000018114) #19	Golga7b (ENSPEMG00000019018) #20	Crtac1 (ENSPEMG00000018527) #21	R3hcc1l (ENSPEMG00000009290) #22	Loxl4 (ENSPEMG00000013107) #23	Pyroxd2 (ENSPEMG00000008189) #24	Hps1 (ENSPEMG00000016367) #25	Hpse2 (ENSPEMG00000009236) #26	Cnnm1 (ENSPEMG00000007501) #27	Got1 (ENSPEMG00000010376) #28	Nkx2-3 (ENSPEMG00000030266) #29	Slc25a28 (ENSPEMG00000012732) #30	Entpd7 (ENSPEMG00000010179) #31	Cox15 (ENSPEMG00000014240) #32	Cutc (ENSPEMG00000008839) #33	Abcc2 (ENSPEMG00000011249) #34	Dnmbp (ENSPEMG00000004169) #35	Cpn1 (ENSPEMG00000017111) #36	Cyp2c23 (ENSPEMG00000009996) #37
Prairie vole	MODERN SPECIES	16	ENSMOCG00000003968	ENSMOCG00000006004 #7	Zdhhc16 (ENSMOCG00000010918) #8	ENSMOCG00000015241 #9	Ubtd1 (ENSMOCG00000004869) #10	Ankrd2 (ENSMOCG00000005548) #11	Hoga1 (ENSMOCG00000008769) #12	Morn4 (ENSMOCG00000011013) #14	Pi4k2a (ENSMOCG00000012623) #15	Avpi1 (ENSMOCG00000012593) #16	Marveld1 (ENSMOCG00000013119) #17	Zfyve27 (ENSMOCG00000014672) #18	Sfrp5 (ENSMOCG00000017190) #19	Golga7b (ENSMOCG00000018394) #20	Crtac1 (ENSMOCG00000021947) #21	ENSMOCG00000019358 #22	Loxl4 (ENSMOCG00000018615) #23	Pyroxd2 (ENSMOCG00000003523) #24	Hps1 (ENSMOCG00000002839) #25	Hpse2 (ENSMOCG00000002351) #26	ENSMOCG00000002567	Cnnm1 (ENSMOCG00000006772) #27	Got1 (ENSMOCG00000022592) #28	Nkx2-3 (ENSMOCG00000013130) #29	Slc25a28 (ENSMOCG00000015560) #30	Entpd7 (ENSMOCG00000020235) #31	Cox15 (ENSMOCG00000001780) #32	Cutc (ENSMOCG00000002743) #33	Abcc2 (ENSMOCG00000008644) #34	Dnmbp (ENSMOCG00000015535) #35	Cpn1 (ENSMOCG00000020512) #36
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00390000015820 #13	ENSGT00530000063604.A #12	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Chinese hamster chok1gshd	MODERN SPECIES	263	Exosc1 (ENSCGRG00001000335) #7	Zdhhc16 (ENSCGRG00001024037) #8	Mms19 (ENSCGRG00001022087) #9	Ubtd1 (ENSCGRG00001020134) #10	Ankrd2 (ENSCGRG00001011585) #11	4933411K16Rik (ENSCGRG00001010620) #13	Hoga1 (ENSCGRG00001010186) #12	Morn4 (ENSCGRG00001008672) #14	Pi4k2a (ENSCGRG00001006184) #15	Avpi1 (ENSCGRG00001003238) #16	Marveld1 (ENSCGRG00001015304) #17	Zfyve27 (ENSCGRG00001001467) #18	Sfrp5 (ENSCGRG00001000510) #19	Golga7b (ENSCGRG00001000198) #20	Crtac1 (ENSCGRG00001023131) #21	R3hcc1l (ENSCGRG00001022500) #22	Loxl4 (ENSCGRG00001021180) #23	Pyroxd2 (ENSCGRG00001020681) #24	Hps1 (ENSCGRG00001017475) #25	Hpse2 (ENSCGRG00001015117) #26	Cnnm1 (ENSCGRG00001012560) #27	Got1 (ENSCGRG00001012066) #28	Nkx2-3 (ENSCGRG00001011819) #29	ENSCGRG00001011590	Slc25a28 (ENSCGRG00001016289) #30	Entpd7 (ENSCGRG00001015434) #31	Cox15 (ENSCGRG00001014605) #32	Cutc (ENSCGRG00001013542) #33	Abcc2 (ENSCGRG00001011487) #34	Dnmbp (ENSCGRG00001002955) #35	Cpn1 (ENSCGRG00001020231) #36
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000020462 #7	Zdhhc16 (ENSMAUG00000020857) #8	Mms19 (ENSMAUG00000021095) #9	Ubtd1 (ENSMAUG00000019537) #10	Ankrd2 (ENSMAUG00000018303) #11	4933411K16Rik (ENSMAUG00000017996) #13	Hoga1 (ENSMAUG00000021216) #12	Morn4 (ENSMAUG00000019301) #14	Pi4k2a (ENSMAUG00000018850) #15	Avpi1 (ENSMAUG00000020844) #16	Marveld1 (ENSMAUG00000020397) #17	Zfyve27 (ENSMAUG00000020339) #18	Sfrp5 (ENSMAUG00000019322) #19	Golga7b (ENSMAUG00000019120) #20	Crtac1 (ENSMAUG00000019399) #21	ENSMAUG00000018764 #22	Loxl4 (ENSMAUG00000019599) #23	Pyroxd2 (ENSMAUG00000017820) #24	Hps1 (ENSMAUG00000019246) #25	Hpse2 (ENSMAUG00000020448) #26	Cnnm1 (ENSMAUG00000018739) #27	Got1 (ENSMAUG00000017853) #28	Nkx2-3 (ENSMAUG00000019421) #29	Slc25a28 (ENSMAUG00000016762) #30	Entpd7 (ENSMAUG00000018067) #31	Cox15 (ENSMAUG00000019550) #32	Cutc (ENSMAUG00000017160) #33	Abcc2 (ENSMAUG00000017544) #34	Dnmbp (ENSMAUG00000021363) #35	Cpn1 (ENSMAUG00000020473) #36	Erlin1 (ENSMAUG00000019313)
Upper Galilee mountains blind mole rat	MODERN SPECIES	771	Exosc1 (ENSNGAG00000022033) #7	Zdhhc16 (ENSNGAG00000023837) #8	Mms19 (ENSNGAG00000023301) #9	Ubtd1 (ENSNGAG00000023711) #10	Ankrd2 (ENSNGAG00000023355) #11	4933411K16Rik (ENSNGAG00000023063) #13	Hoga1 (ENSNGAG00000023929) #12	Morn4 (ENSNGAG00000018405) #14	Pi4k2a (ENSNGAG00000022396) #15	Avpi1 (ENSNGAG00000020134) #16	Marveld1 (ENSNGAG00000006309) #17	Zfyve27 (ENSNGAG00000012854) #18	Sfrp5 (ENSNGAG00000022581) #19	Golga7b (ENSNGAG00000001605) #20	Crtac1 (ENSNGAG00000021345) #21	ENSNGAG00000017124 #22	Loxl4 (ENSNGAG00000014165) #23	Pyroxd2 (ENSNGAG00000021947) #24	Hps1 (ENSNGAG00000013601) #25	Hpse2 (ENSNGAG00000021159) #26	Cnnm1 (ENSNGAG00000016351) #27	Got1 (ENSNGAG00000005165) #28	Nkx2-3 (ENSNGAG00000021093) #29	Slc25a28 (ENSNGAG00000023260) #30	Entpd7 (ENSNGAG00000012372) #31	Cox15 (ENSNGAG00000023623) #32	Cutc (ENSNGAG00000024190) #33	Abcc2 (ENSNGAG00000017615) #34	Dnmbp (ENSNGAG00000011513) #35
Lesser Egyptian jerboa	MODERN SPECIES	179	ENSJJAG00000015130	Exosc1 (ENSJJAG00000013311) #7	Zdhhc16 (ENSJJAG00000011384) #8	Mms19 (ENSJJAG00000016216) #9	Ubtd1 (ENSJJAG00000013950) #10	Ankrd2 (ENSJJAG00000013600) #11	Hoga1 (ENSJJAG00000013267) #12	Morn4 (ENSJJAG00000013030) #14	Pi4k2a (ENSJJAG00000021991) #15	Avpi1 (ENSJJAG00000021703) #16	Marveld1 (ENSJJAG00000012601) #17	Zfyve27 (ENSJJAG00000005638) #18	Sfrp5 (ENSJJAG00000022836) #19	Golga7b (ENSJJAG00000021511) #20	Crtac1 (ENSJJAG00000020645) #21	ENSJJAG00000020251 #22	Loxl4 (ENSJJAG00000013296) #23	Pyroxd2 (ENSJJAG00000022532) #24	Hps1 (ENSJJAG00000017073) #25	Hpse2 (ENSJJAG00000015190) #26	Cnnm1 (ENSJJAG00000013432) #27	Got1 (ENSJJAG00000019106) #28	Nkx2-3 (ENSJJAG00000017127) #29	Slc25a28 (ENSJJAG00000016611) #30	ENSJJAG00000015832	Entpd7 (ENSJJAG00000015308) #31	ENSJJAG00000012745	Cox15 (ENSJJAG00000011715) #32	ENSJJAG00000010550 #33	Abcc2 (ENSJJAG00000020088) #34	Dnmbp (ENSJJAG00000017540) #35
Kangaroo rat	MODERN SPECIES	355	Pgam1 (ENSDORG00000027733)	Exosc1 (ENSDORG00000016528) #7	Zdhhc16 (ENSDORG00000016530) #8	Mms19 (ENSDORG00000016531) #9	Ubtd1 (ENSDORG00000029750) #10	Ankrd2 (ENSDORG00000016536) #11	Hoga1 (ENSDORG00000016537) #12	Morn4 (ENSDORG00000016540) #14	Pi4k2a (ENSDORG00000002269) #15	Avpi1 (ENSDORG00000028399) #16	Marveld1 (ENSDORG00000002279) #17	Zfyve27 (ENSDORG00000008178) #18	Sfrp5 (ENSDORG00000008180) #19	Golga7b (ENSDORG00000015475) #20	Crtac1 (ENSDORG00000015477) #21	ENSDORG00000024055 #22	Loxl4 (ENSDORG00000015733) #23	Pyroxd2 (ENSDORG00000003802) #24	Hps1 (ENSDORG00000003804) #25	Hpse2 (ENSDORG00000003807) #26	Cnnm1 (ENSDORG00000014706) #27	Got1 (ENSDORG00000014708) #28	Nkx2-3 (ENSDORG00000003645) #29	Slc25a28 (ENSDORG00000003647) #30	Entpd7 (ENSDORG00000005426) #31	Cox15 (ENSDORG00000005427) #32	Cutc (ENSDORG00000005428) #33	ENSDORG00000028853	Abcc2 (ENSDORG00000009085) #34	ENSDORG00000011072 #35	Cpn1 (ENSDORG00000011960) #36
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00390000014666.b
Marmotini	ANCESTRAL SPECIES	16	ENSGT00390000015287.h.g.a #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00390000014666.b
Marmotini_b	ANCESTRAL SPECIES	97	ENSGT00390000015287.h.g.a #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00390000014666.b
Squirrel	MODERN SPECIES	236	EXOSC1 (ENSSTOG00000006615) #7	ZDHHC16 (ENSSTOG00000006627) #8	MMS19 (ENSSTOG00000006641) #9	UBTD1 (ENSSTOG00000006700) #10	ANKRD2 (ENSSTOG00000006701) #11	ENSSTOG00000020441 #13	HOGA1 (ENSSTOG00000011929) #12	MORN4 (ENSSTOG00000026926) #14	PI4K2A (ENSSTOG00000006737) #15	AVPI1 (ENSSTOG00000029293) #16	MARVELD1 (ENSSTOG00000006756) #17	ZFYVE27 (ENSSTOG00000012103) #18	SFRP5 (ENSSTOG00000012113) #19	GOLGA7B (ENSSTOG00000012116) #20	CRTAC1 (ENSSTOG00000012122) #21	R3HCC1L (ENSSTOG00000021571) #22	LOXL4 (ENSSTOG00000026677) #23	PYROXD2 (ENSSTOG00000003659) #24	HPS1 (ENSSTOG00000003686) #25	HPSE2 (ENSSTOG00000003713) #26	CNNM1 (ENSSTOG00000019801) #27	GOT1 (ENSSTOG00000007527) #28	NKX2-3 (ENSSTOG00000010439) #29	SLC25A28 (ENSSTOG00000027786) #30	ENTPD7 (ENSSTOG00000010447) #31	COX15 (ENSSTOG00000010459) #32	CUTC (ENSSTOG00000010467) #33	ABCC2 (ENSSTOG00000009688) #34	DNMBP (ENSSTOG00000008832) #35	CPN1 (ENSSTOG00000008870) #36	ERLIN1 (ENSSTOG00000028018)
Arctic ground squirrel	MODERN SPECIES	145	ENSUPAG00010014471 #7	ZDHHC16 (ENSUPAG00010014509) #8	MMS19 (ENSUPAG00010014546) #9	UBTD1 (ENSUPAG00010014630) #10	ANKRD2 (ENSUPAG00010014650) #11	HOGA1 (ENSUPAG00010014672) #12	ENSUPAG00010014696 #13	MORN4 (ENSUPAG00010014704) #14	PI4K2A (ENSUPAG00010014721) #15	AVPI1 (ENSUPAG00010014745) #16	MARVELD1 (ENSUPAG00010014753) #17	ZFYVE27 (ENSUPAG00010014758) #18	SFRP5 (ENSUPAG00010014793) #19	GOLGA7B (ENSUPAG00010014804) #20	CRTAC1 (ENSUPAG00010014843) #21	R3HCC1L (ENSUPAG00010014922) #22	LOXL4 (ENSUPAG00010014949) #23	PYROXD2 (ENSUPAG00010015034) #24	HPS1 (ENSUPAG00010015101) #25	HPSE2 (ENSUPAG00010018211) #26	CNNM1 (ENSUPAG00010018225) #27	GOT1 (ENSUPAG00010018253) #28	ENSUPAG00010018264	NKX2-3 (ENSUPAG00010018277) #29	SLC25A28 (ENSUPAG00010018285) #30	ENTPD7 (ENSUPAG00010018296) #31	COX15 (ENSUPAG00010018308) #32	CUTC (ENSUPAG00010018317) #33	ABCC2 (ENSUPAG00010018333) #34	DNMBP (ENSUPAG00010018385) #35	CPN1 (ENSUPAG00010018515) #36
Alpin marmot	MODERN SPECIES	39	PGAM1 (ENSMMMG00000021588)	EXOSC1 (ENSMMMG00000021593) #7	ZDHHC16 (ENSMMMG00000021606) #8	MMS19 (ENSMMMG00000021617) #9	UBTD1 (ENSMMMG00000021672) #10	ANKRD2 (ENSMMMG00000021677) #11	HOGA1 (ENSMMMG00000021688) #12	C10orf62 (ENSMMMG00000021691) #13	ENSMMMG00000021693 #14	PI4K2A (ENSMMMG00000021697) #15	AVPI1 (ENSMMMG00000021725) #16	ZFYVE27 (ENSMMMG00000021729) #18	SFRP5 (ENSMMMG00000021743) #19	GOLGA7B (ENSMMMG00000021751) #20	CRTAC1 (ENSMMMG00000021757) #21	R3HCC1L (ENSMMMG00000021780) #22	LOXL4 (ENSMMMG00000021798) #23	PYROXD2 (ENSMMMG00000021833) #24	HPS1 (ENSMMMG00000021856) #25	HPSE2 (ENSMMMG00000022778) #26	CNNM1 (ENSMMMG00000022793) #27	GOT1 (ENSMMMG00000022811) #28	NKX2-3 (ENSMMMG00000022815) #29	SLC25A28 (ENSMMMG00000022817) #30	ENTPD7 (ENSMMMG00000022820) #31	COX15 (ENSMMMG00000022826) #32	ENSMMMG00000022829 #33	ABCC2 (ENSMMMG00000022832) #34	DNMBP (ENSMMMG00000022849) #35	CPN1 (ENSMMMG00000022921) #36	ERLIN1 (ENSMMMG00000022928)
Eurasian red squirrel	MODERN SPECIES	13	PGAM1 (ENSSVLG00005017816)	EXOSC1 (ENSSVLG00005017650) #7	ZDHHC16 (ENSSVLG00005017379) #8	MMS19 (ENSSVLG00005017214) #9	ANKRD2 (ENSSVLG00005016694) #11	C10orf62 (ENSSVLG00005016610) #13	HOGA1 (ENSSVLG00005016513) #12	MORN4 (ENSSVLG00005016417) #14	PI4K2A (ENSSVLG00005016376) #15	AVPI1 (ENSSVLG00005016336) #16	MARVELD1 (ENSSVLG00005016317) #17	ZFYVE27 (ENSSVLG00005015995) #18	SFRP5 (ENSSVLG00005015909) #19	GOLGA7B (ENSSVLG00005015799) #20	CRTAC1 (ENSSVLG00005015382) #21	R3HCC1L (ENSSVLG00005015247) #22	LOXL4 (ENSSVLG00005015215) #23	PYROXD2 (ENSSVLG00005015178) #24	HPS1 (ENSSVLG00005014775) #25	HPSE2 (ENSSVLG00005014098) #26	CNNM1 (ENSSVLG00005013611) #27	GOT1 (ENSSVLG00005013505) #28	NKX2-3 (ENSSVLG00005013448) #29	SLC25A28 (ENSSVLG00005013360) #30	ENTPD7 (ENSSVLG00005013324) #31	COX15 (ENSSVLG00005013263) #32	CUTC (ENSSVLG00005013175) #33	ABCC2 (ENSSVLG00005012720) #34	DNMBP (ENSSVLG00005012459) #35	CPN1 (ENSSVLG00005012310) #36	ENSSVLG00005012246
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00950000182926.b.d.c.a.j	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049872 #16	ENSGT00510000049375 #17	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Long-tailed chinchilla	MODERN SPECIES	214	ENSCLAG00000002369	EXOSC1 (ENSCLAG00000002463) #7	ZDHHC16 (ENSCLAG00000002570) #8	MMS19 (ENSCLAG00000002928) #9	UBTD1 (ENSCLAG00000002195) #10	ANKRD2 (ENSCLAG00000002245) #11	HOGA1 (ENSCLAG00000002513) #12	MORN4 (ENSCLAG00000001852) #14	PI4K2A (ENSCLAG00000001867) #15	AVPI1 (ENSCLAG00000001993) #16	MARVELD1 (ENSCLAG00000002008) #17	ZFYVE27 (ENSCLAG00000002084) #18	SFRP5 (ENSCLAG00000002118) #19	GOLGA7B (ENSCLAG00000002560) #20	CRTAC1 (ENSCLAG00000002601) #21	R3HCC1L (ENSCLAG00000002695) #22	LOXL4 (ENSCLAG00000002846) #23	PYROXD2 (ENSCLAG00000003225) #24	HPS1 (ENSCLAG00000003379) #25	HPSE2 (ENSCLAG00000001979) #26	CNNM1 (ENSCLAG00000002026) #27	GOT1 (ENSCLAG00000002152) #28	NKX2-3 (ENSCLAG00000002178) #29	SLC25A28 (ENSCLAG00000002948) #30	ENTPD7 (ENSCLAG00000004017) #31	COX15 (ENSCLAG00000004070) #32	CUTC (ENSCLAG00000004139) #33	ABCC2 (ENSCLAG00000003041) #34	DNMBP (ENSCLAG00000003323) #35	CPN1 (ENSCLAG00000003686) #36	ENSCLAG00000003725 #37
Degu	MODERN SPECIES	51	RRP12 (ENSODEG00000016439)	EXOSC1 (ENSODEG00000016709) #7	ZDHHC16 (ENSODEG00000017409) #8	MMS19 (ENSODEG00000016062) #9	UBTD1 (ENSODEG00000015973) #10	ANKRD2 (ENSODEG00000015804) #11	HOGA1 (ENSODEG00000016324) #12	ENSODEG00000016736 #14	PI4K2A (ENSODEG00000016781) #15	AVPI1 (ENSODEG00000016690) #16	MARVELD1 (ENSODEG00000016451) #17	ZFYVE27 (ENSODEG00000016383) #18	SFRP5 (ENSODEG00000016215) #19	GOLGA7B (ENSODEG00000016294) #20	CRTAC1 (ENSODEG00000015999) #21	ENSODEG00000016256 #22	ENSODEG00000016477	LOXL4 (ENSODEG00000016342) #23	PYROXD2 (ENSODEG00000016020) #24	HPS1 (ENSODEG00000016655) #25	HPSE2 (ENSODEG00000016711) #26	ENSODEG00000016599	CNNM1 (ENSODEG00000016538) #27	GOT1 (ENSODEG00000016726) #28	NKX2-3 (ENSODEG00000016861) #29	ENSODEG00000016497 #30	ENTPD7 (ENSODEG00000016776) #31	ENSODEG00000016548	ENSODEG00000016221 #32	CUTC (ENSODEG00000016369) #33	ABCC2 (ENSODEG00000016634) #34
Guinea pig	MODERN SPECIES	1	EXOSC1 (ENSCPOG00000001173) #7	ZDHHC16 (ENSCPOG00000006710) #8	MMS19 (ENSCPOG00000006715) #9	UBTD1 (ENSCPOG00000033582) #10	ANKRD2 (ENSCPOG00000035324) #11	HOGA1 (ENSCPOG00000004555) #12	C10orf62 (ENSCPOG00000033899) #13	MORN4 (ENSCPOG00000031641) #14	PI4K2A (ENSCPOG00000004558) #15	AVPI1 (ENSCPOG00000024508) #16	MARVELD1 (ENSCPOG00000024434) #17	ENSCPOG00000013283 #18	SFRP5 (ENSCPOG00000021880) #19	GOLGA7B (ENSCPOG00000031966) #20	CRTAC1 (ENSCPOG00000007832) #21	R3HCC1L (ENSCPOG00000007004) #22	LOXL4 (ENSCPOG00000007010) #23	PYROXD2 (ENSCPOG00000007018) #24	HPS1 (ENSCPOG00000007029) #25	HPSE2 (ENSCPOG00000007040) #26	ENSCPOG00000020409	CNNM1 (ENSCPOG00000008627) #27	GOT1 (ENSCPOG00000008633) #28	NKX2-3 (ENSCPOG00000009772) #29	SLC25A28 (ENSCPOG00000036710) #30	ENTPD7 (ENSCPOG00000009780) #31	COX15 (ENSCPOG00000009783) #32	CUTC (ENSCPOG00000010941) #33	ABCC2 (ENSCPOG00000010942) #34	DNMBP (ENSCPOG00000005939) #35	CPN1 (ENSCPOG00000000190) #36
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000043030	NRBF2 (ENSHGLG00000006705)	ENSHGLG00000009176	JMJD1C (ENSHGLG00000003439)	ENSHGLG00000002565	ENSHGLG00000036468	ENSHGLG00000019840	ENSHGLG00000001073	ENSHGLG00000046411	ENSHGLG00000043450	LRRTM3 (ENSHGLG00000016164)	ENSHGLG00000038381	ENSHGLG00000014093	ENSHGLG00000035976	ENSHGLG00000010600 #23	ENSHGLG00000042684 #22	ENSHGLG00000020899	ENSHGLG00000009871 #24	ENSHGLG00000013798 #25	ENSHGLG00000012447	ENSHGLG00000045765	ENSHGLG00000009626	ENSHGLG00000014473 #26	CNNM1 (ENSHGLG00000009827) #27	GOT1 (ENSHGLG00000010094) #28	NKX2-3 (ENSHGLG00000042373) #29	ENSHGLG00000020927	SLC25A28 (ENSHGLG00000034471) #30	ENTPD7 (ENSHGLG00000017820) #31	COX15 (ENSHGLG00000041126) #32	CUTC (ENSHGLG00000019050) #33
Naked mole-rat female	MODERN SPECIES	30	EXOSC1 (ENSHGLG00000016927) #7	ZDHHC16 (ENSHGLG00000017705) #8	MMS19 (ENSHGLG00000019329) #9	UBTD1 (ENSHGLG00000006858) #10	ANKRD2 (ENSHGLG00000008161) #11	ENSHGLG00000033035 #13	HOGA1 (ENSHGLG00000038633) #12	MORN4 (ENSHGLG00000018443) #14	PI4K2A (ENSHGLG00000013652) #15	AVPI1 (ENSHGLG00000010646) #16	MARVELD1 (ENSHGLG00000034069) #17	SFRP5 (ENSHGLG00000010192) #19	ZFYVE27 (ENSHGLG00000013301) #18	ENSHGLG00000038015 #20	ENSHGLG00000011698 #21	ENSHGLG00000012238 #22	ENSHGLG00000017778	ZBED4 (ENSHGLG00000020932)	ALG12 (ENSHGLG00000015414)	CRELD2 (ENSHGLG00000047614)	PIM3 (ENSHGLG00000015113)	ENSHGLG00000040028	MLC1 (ENSHGLG00000015098)	MOV10L1 (ENSHGLG00000015410)	PANX2 (ENSHGLG00000015536)	TRABD (ENSHGLG00000015283)	SELENOO (ENSHGLG00000018969)	ENSHGLG00000010839	HDAC10 (ENSHGLG00000009247)	MAPK12 (ENSHGLG00000009098)	MAPK11 (ENSHGLG00000016345)
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00950000182926.b.d.c.a	ENSGT00390000015287.h #7	ENSGT00940000155032 #8	ENSGT00390000015583 #9	ENSGT00940000158630 #10	ENSGT00940000153956.b #11	ENSGT00530000063604.A #12	ENSGT00390000015820 #13	ENSGT00730000111173 #14	ENSGT00390000010434.b #15	ENSGT00510000049709	ENSGT00390000013298 #18	ENSGT00940000160608 #19	ENSGT00390000000134.a #20	ENSGT00390000013726 #21	ENSGT00530000063711.b #22	ENSGT00940000157042 #23	ENSGT00390000011684 #24	ENSGT00390000015298 #25	ENSGT00390000004874.a.a #26	ENSGT00940000157525 #27	ENSGT00950000183082.b.b.b #28	ENSGT00940000157556 #29	ENSGT00940000157049 #30	ENSGT01100000263540.B.c #31	ENSGT00390000002223 #32	ENSGT00390000008454 #33	ENSGT00940000161741 #34	ENSGT00950000183088.a.b.a #35	ENSGT00940000158235 #36	ENSGT00940000163402 #37
Rabbit	MODERN SPECIES	9	RRP12 (ENSOCUG00000005662)	ENSOCUG00000011898 ##7	ZDHHC16 (ENSOCUG00000000595) #8	MMS19 (ENSOCUG00000007776) #9	UBTD1 (ENSOCUG00000007789) #10	ANKRD2 (ENSOCUG00000007793) #11	HOGA1 (ENSOCUG00000007799) #12	MORN4 (ENSOCUG00000007810) #14	PI4K2A (ENSOCUG00000007814) #15	AVPI1 (ENSOCUG00000007821) #16	MARVELD1 (ENSOCUG00000025329) #17	ZFYVE27 (ENSOCUG00000001352) #18	SFRP5 (ENSOCUG00000021137) #19	GOLGA7B (ENSOCUG00000017860) #20	CRTAC1 (ENSOCUG00000004978) #21	R3HCC1L (ENSOCUG00000004983) #22	LOXL4 (ENSOCUG00000004988) #23	PYROXD2 (ENSOCUG00000004995) #24	ENSOCUG00000038615	HPS1 (ENSOCUG00000001633) #25	HPSE2 (ENSOCUG00000001638) #26	CNNM1 (ENSOCUG00000012318) #27	GOT1 (ENSOCUG00000012333) #28	SLC25A28 (ENSOCUG00000011690) #30	ENTPD7 (ENSOCUG00000011679) #31	COX15 (ENSOCUG00000003143) #32	CUTC (ENSOCUG00000003148) #33	ABCC2 (ENSOCUG00000008164) #34	DNMBP (ENSOCUG00000002254) #35	CPN1 (ENSOCUG00000002261) #36	ENSOCUG00000024354 #37
Pika	MODERN SPECIES	4300	PGAM1 (ENSOPRG00000005058)	EXOSC1 (ENSOPRG00000005065) #7	ZDHHC16 (ENSOPRG00000005078) #8	MMS19 (ENSOPRG00000005093) #9	UBTD1 (ENSOPRG00000005157) #10	ANKRD2 (ENSOPRG00000005162) #11	HOGA1 (ENSOPRG00000005177) #12	C10orf62 (ENSOPRG00000005193) #13	MORN4 (ENSOPRG00000005194) #14	PI4K2A (ENSOPRG00000005203) #15	ENSOPRG00000005220	ZFYVE27 (ENSOPRG00000005240) #18	SFRP5 (ENSOPRG00000005262) #19	GOLGA7B (ENSOPRG00000005279) #20	CRTAC1 (ENSOPRG00000005288) #21	ENSOPRG00000005351 #22