Neopterygii ANCESTRAL SPECIES 3 ENSGT00950000183181.A.a ENSGT00940000162787 ENSGT00390000003939 ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00880000138034 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846 #12 ENSGT00390000012017 ENSGT00390000011433 #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029 ENSGT00940000154292.a.b #22 ENSGT00940000163749 ENSGT00940000158952 ENSGT00940000157364.C.b.a ##23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.b ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00550000074867 ENSGT00730000110943.B.c ENSGT00950000182980.a.b.b.b ENSGT00940000167263 ENSGT00940000158638 Osteoglossocephalai ANCESTRAL SPECIES 31 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029.a.b ENSGT00940000177029.b ENSGT00940000154292.a.b #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000163749 ENSGT00940000158952 ENSGT00940000176000 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00390000018245 ENSGT00940000164251 ENSGT00940000164218 ENSGT00940000155265.b.b Clupeocephala ANCESTRAL SPECIES 47 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00990000204854 #9 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES 17 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00990000204854 #9 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00390000003939 ENSGT00990000208446 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00990000204854 #9 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b #37 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 273 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00990000208446 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 Salmoninae_a ANCESTRAL SPECIES 109 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.b #32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.h ##36 ENSGT00940000155669.mc.b ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b ENSGT00940000155930.i.b Salmo ANCESTRAL SPECIES 31 ENSGT00390000008727.a.a.d.e #7 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.b #32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.g.b.a #36 ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b ENSGT00940000155930.i.b ENSGT00940000154711.a.a.f.a Atlantic salmon MODERN SPECIES ENSSSAG00000086413 #7 kcnk1b (ENSSSAG00000083691) #8 ENSSSAG00000056942 #9 ENSSSAG00000056522 #10 agpat4 (ENSSSAG00000056486) #11 ENSSSAG00000047444 #12 ENSSSAG00000025627 #13 ENSSSAG00000092780 #14 ENSSSAG00000091768 #15 ENSSSAG00000103525 #16 ENSSSAG00000103901 #17 ENSSSAG00000015935 #18 ENSSSAG00000101951 #19 PSME4 (ENSSSAG00000043370) #20 ERLEC1 (ENSSSAG00000043168) #21 NRXN1 (ENSSSAG00000004275) #22 LHCGR (ENSSSAG00000055360) #23 gtf2a1l (ENSSSAG00000088164) #24 STON1 (ENSSSAG00000003728) #25 ppp1r21 (ENSSSAG00000003694) #26 ENSSSAG00000089922 #27 ENSSSAG00000043666 #28 ENSSSAG00000111856 #29 ENSSSAG00000118030 #30 ENSSSAG00000003555 #31 itga9 (ENSSSAG00000003063) #32 ENSSSAG00000103405 #33 ENSSSAG00000002972 #34 ENSSSAG00000094286 #35 ENSSSAG00000101996 #36 ENSSSAG00000002924 #37 River trout MODERN SPECIES 9 ENSSTUG00000021549 ENSSTUG00000021589 SLC35F3 (ENSSTUG00000021596) #7 ENSSTUG00000021648 kcnk1b (ENSSTUG00000021658) #8 ENSSTUG00000021823 #10 ENSSTUG00000027638 #9 agpat4 (ENSSTUG00000027647) #11 ENSSTUG00000027697 #12 ENSSTUG00000028029 ENSSTUG00000028059 PSME4 (ENSSTUG00000028118) #20 GPR75 (ENSSTUG00000029230) erlec1 (ENSSTUG00000029257) #21 ENSSTUG00000029465 NRXN1 (ENSSTUG00000029529) #22 ENSSTUG00000031573 ENSSTUG00000031581 ENSSTUG00000031598 ENSSTUG00000031614 LHCGR (ENSSTUG00000031622) #23 gtf2a1l (ENSSTUG00000031656) #24 ENSSTUG00000031680 STON1 (ENSSTUG00000031687) #25 ppp1r21 (ENSSTUG00000031776) #26 FOXN2 (ENSSTUG00000033587) ENSSTUG00000033616 #28 KCNK12 (ENSSTUG00000033822) #29 GOLGA4 (ENSSTUG00000033860) #31 itga9 (ENSSTUG00000034021) #32 ENSSTUG00000034666 #34 Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.b.a ##22 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.a.a ##32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.h ##36 ENSGT00940000155669.mc.b ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b ENSGT00940000155930.i.b Rainbow trout MODERN SPECIES 15 ENSOMYG00000052981 ENSOMYG00000024407 ENSOMYG00000024583 #12 ENSOMYG00000072637 ##13 ENSOMYG00000075183 ENSOMYG00000051807 ENSOMYG00000053929 ENSOMYG00000057002 PSME4 (ENSOMYG00000025175) #20 ENSOMYG00000077387 ENSOMYG00000026216 erlec1 (ENSOMYG00000026232) #21 ENSOMYG00000055620 ENSOMYG00000027535 ##22 ENSOMYG00000054114 NRXN1 (ENSOMYG00000026446) #22 LHCGR (ENSOMYG00000050586) #23 gtf2a1l (ENSOMYG00000037167) #24 STON1 (ENSOMYG00000037153) #25 ppp1r21 (ENSOMYG00000037105) #26 ENSOMYG00000048718 ENSOMYG00000037077 ENSOMYG00000034921 #28 ENSOMYG00000057037 ENSOMYG00000034742 #29 ENSOMYG00000034694 #31 itga9 (ENSOMYG00000034658) ##32 ENSOMYG00000034581 #34 ENSOMYG00000034628 #36 ENSOMYG00000034600 EPAS1 (ENSOMYG00000034554) Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.b.a ##22 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.a.a ##32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.g.b.b ##36 ENSGT00940000155669.mc.b ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b ENSGT00940000155930.i.b Chinook salmon MODERN SPECIES ENSOTSG00005026866 epas1b (ENSOTSG00005026875) ENSOTSG00005029069 ENSOTSG00005029070 ENSOTSG00005029072 pcgf5a (ENSOTSG00005029077) ENSOTSG00005029087 #37 ENSOTSG00005029089 ENSOTSG00005029093 ##36 ENSOTSG00005029102 #34 GOLGA4 (ENSOTSG00005029110) #31 PSME4 (ENSOTSG00005029152) #20 GPR75 (ENSOTSG00005035805) erlec1 (ENSOTSG00005035877) #21 ENSOTSG00005036153 ##22 NRXN1 (ENSOTSG00005036190) #22 LHCGR (ENSOTSG00005036192) #23 gtf2a1l (ENSOTSG00005036193) #24 ENSOTSG00005036194 #25 ppp1r21 (ENSOTSG00005036205) #26 ENSOTSG00005039080 ENSOTSG00005039081 ENSOTSG00005039082 ENSOTSG00005039089 #28 KCNK12 (ENSOTSG00005039783) #29 Coho salmon MODERN SPECIES 2 kcnk1b (ENSOKIG00005032111) #8 ENSOKIG00005032275 #10 agpat4 (ENSOKIG00005036311) #11 ENSOKIG00005036434 #9 ENSOKIG00005036450 #12 PSME4 (ENSOKIG00005036846) #20 GPR75 (ENSOKIG00005042312) erlec1 (ENSOKIG00005042325) #21 NRXN1 (ENSOKIG00005042525) #22 ENSOKIG00005044766 ENSOKIG00005044777 LHCGR (ENSOKIG00005044786) #23 GTF2A1L (ENSOKIG00005044798) #24 PPP1R21 (ENSOKIG00005044830) #26 ENSOKIG00005045119 ENSOKIG00005045208 #28 KCNK12 (ENSOKIG00005046107) #29 GOLGA4 (ENSOKIG00005046116) #31 itga9 (ENSOKIG00005046299) ##32 ENSOKIG00005046838 ENSOKIG00005046845 #34 ENSOKIG00005046850 ##36 ENSOKIG00005046857 ANKRD1 (ENSOKIG00005046870) #37 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 2581 ENSHHUG00000003767 #22 ENSHHUG00000003760 #22 Huchen MODERN SPECIES 2581 ENSHHUG00000003767 #22 ENSHHUG00000003760 #22 Huchen MODERN SPECIES 3081 ENSHHUG00000025095 #22 Salmoninae ANCESTRAL SPECIES 19 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.h.a.a ##22 ENSGT00940000157364.B.d ##23 ENSGT00940000158817.e ##25 ENSGT00390000006820.c ##26 ENSGT00940000159118.g ENSGT00530000063425.a.a.a.b.i.a.a ##28 ENSGT00550000075024 ENSGT00940000161424.k.a ##29 ENSGT00730000111139.m ##31 ENSGT00940000156503.u ##32 ENSGT00830000128368.b.e ##34 ENSGT00940000156844.b.g.a ##36 ENSGT00940000155669.mc.a ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b.c ##37 ENSGT00940000155896.k.a Huchen MODERN SPECIES 2125 ENSHHUG00000024621 ##22 Salmoninae_a ANCESTRAL SPECIES 38 ENSGT00530000064017.a.f ENSGT00950000182926.b.d.a.a.b.h ENSGT00390000010434.b.d.b ENSGT00510000049375.g ENSGT00940000163723.A.f.a ENSGT00940000165757.c.b.b ENSGT00940000155293.a.a.i ##8 ENSGT00990000204854.d ##9 ENSGT00940000165701.g ##10 ENSGT00950000182836.b.b.b.b.l ##11 ENSGT00940000157846.c.c ##12 ENSGT00390000012017 ENSGT00390000011433.s.a.f ##20 ENSGT00530000063603.B.h ##21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.h.a.a ##22 ENSGT00940000157364.B.d ##23 ENSGT00940000158817.e ##25 ENSGT00390000006820.c ##26 ENSGT00940000159118.g ENSGT00530000063425.a.a.a.b.i.a.a ##28 ENSGT00550000075024 ENSGT00940000161424.k.a ##29 ENSGT00730000111139.m ##31 ENSGT00940000156503.u ##32 ENSGT00940000157396.jc ENSGT00830000128368.b.e ##34 ENSGT00940000156844.b.g.a ##36 ENSGT00940000155669.mc.a ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b.c ##37 Salmo ANCESTRAL SPECIES 38 ENSGT00940000157049.c.b.a.a ENSGT00530000064017.a.f ENSGT00950000182926.b.d.a.a.b.h ENSGT00390000010434.b.d.b ENSGT00510000049375.g ENSGT00940000163723.A.f.a ENSGT00940000165757.c.b.b ENSGT00940000155293.a.a.i ##8 ENSGT00990000204854.d ##9 ENSGT00940000165701.g ##10 ENSGT00950000182836.b.b.b.b.l ##11 ENSGT00940000157846.c.c ##12 ENSGT00390000012017 ENSGT00390000011433.s.a.f ##20 ENSGT00530000063603.B.h ##21 ENSGT00940000154292.a.b.d.h.a.a ##22 ENSGT00940000157364.B.d ##23 ENSGT00940000158817.e ##25 ENSGT00390000006820.c ##26 ENSGT00940000159118.g ENSGT00530000063425.a.a.a.b.i.a.a ##28 ENSGT00550000075024 ENSGT00940000161424.k.a ##29 ENSGT00730000111139.m ##31 ENSGT00940000156503.u ##32 ENSGT00940000157396.jc ENSGT00830000128368.b.e ##34 ENSGT00940000156844.b.g.a ##36 ENSGT00940000155669.mc.a ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b.c ##37 River trout MODERN SPECIES 1 ENSSTUG00000018821 zgc:171482 (ENSSTUG00000018804) kcnk1b (ENSSTUG00000018792) ##8 ENSSTUG00000018776 ##9 ENSSTUG00000018149 ##10 agpat4 (ENSSTUG00000018116) ##11 ENSSTUG00000018109 THBS2 (ENSSTUG00000016312) ##12 ENSSTUG00000016231 ENSSTUG00000016224 ENSSTUG00000016069 ##20 erlec1 (ENSSTUG00000015971) ##21 ENSSTUG00000015961 ENSSTUG00000015951 ENSSTUG00000015938 nrxn1b (ENSSTUG00000013680) ##22 LHCGR (ENSSTUG00000013262) ##23 STON1 (ENSSTUG00000013233) ##25 ppp1r21 (ENSSTUG00000012084) ##26 FOXN2 (ENSSTUG00000012050) ENSSTUG00000010533 ##28 msh6 (ENSSTUG00000010207) ENSSTUG00000010183 KCNK12 (ENSSTUG00000010180) ##29 GOLGA4 (ENSSTUG00000009954) ##31 itga9 (ENSSTUG00000009715) ##32 ZC3H6 (ENSSTUG00000009680) ENSSTUG00000009669 ##34 ENSSTUG00000009642 ##36 ENSSTUG00000009631 MERTK (ENSSTUG00000009479) Atlantic salmon MODERN SPECIES 20 ENSSSAG00000122151 ENSSSAG00000101173 ENSSSAG00000075553 ENSSSAG00000083955 ENSSSAG00000088446 ENSSSAG00000099101 ##35 ENSSSAG00000110104 kcnk1b (ENSSSAG00000075442) ##8 ENSSSAG00000075436 ##9 ENSSSAG00000072418 ##10 agpat4 (ENSSSAG00000072273) ##11 thbs2 (ENSSSAG00000071980) ##12 ENSSSAG00000071904 PSME4 (ENSSSAG00000071799) ##20 ERLEC1 (ENSSSAG00000071732) ##21 NRXN1 (ENSSSAG00000057796) ##22 LHCGR (ENSSSAG00000057492) ##23 ENSSSAG00000057485 ##25 ppp1r21 (ENSSSAG00000054096) ##26 ENSSSAG00000100373 ENSSSAG00000049879 ENSSSAG00000045454 ##28 ENSSSAG00000042313 ENSSSAG00000042206 ##29 ENSSSAG00000041544 ##31 itga9 (ENSSSAG00000040941) ##32 ENSSSAG00000091255 ZC3H6 (ENSSSAG00000040894) ENSSSAG00000100465 ##34 ENSSSAG00000002948 ##36 MERTK (ENSSSAG00000040437) Oncorhynchus ANCESTRAL SPECIES 23 ENSGT00940000157049.c.b.b ENSGT00530000064017.a.f ENSGT00950000182926.b.d.a.a.b.h ENSGT00390000010434.b.d.b ENSGT00510000049375.g ENSGT01060000253683 ENSGT00940000165757.c.a.b ENSGT00940000155293.a.a.i ##8 ENSGT00940000165701.g ##10 ENSGT00950000182836.b.b.b.b.l ##11 ENSGT00940000157846.c.c ##12 ENSGT00390000012017 ENSGT00390000011433.s.a.f ##20 ENSGT00530000063603.B.h ##21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.h.a.a ##22 ENSGT00940000157364.B.d ##23 ENSGT00940000158817.e ##25 ENSGT00390000006820.c ##26 ENSGT00940000159118.g ENSGT00530000063425.a.a.a.b.i.a.a ##28 ENSGT00550000075024 ENSGT00940000161424.k.a ##29 ENSGT00730000111139.m ##31 ENSGT00940000156503.u ##32 ENSGT00940000157396.jc ENSGT00830000128368.b.e ##34 ENSGT00940000156844.b.g.a ##36 ENSGT00940000155669.mc.a ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b.c ##37 Rainbow trout MODERN SPECIES 12 ENSOMYG00000043076 ENSOMYG00000043052 ENSOMYG00000043047 ENSOMYG00000071543 ENSOMYG00000048427 kcnk1b (ENSOMYG00000043033) ##8 ENSOMYG00000038592 ##10 agpat4 (ENSOMYG00000037674) ##11 ENSOMYG00000037486 ##12 ENSOMYG00000037387 ENSOMYG00000036954 ##20 ERLEC1 (ENSOMYG00000036803) ##21 ENSOMYG00000049636 ENSOMYG00000058306 ENSOMYG00000052965 ENSOMYG00000035998 ##22 LHCGR (ENSOMYG00000035803) ##23 ENSOMYG00000035787 ##25 PPP1R21 (ENSOMYG00000033214) ##26 ENSOMYG00000032741 ENSOMYG00000030467 ##28 ENSOMYG00000029486 ENSOMYG00000029262 ##29 ENSOMYG00000029080 ##31 itga9 (ENSOMYG00000028775) ##32 ZC3H6 (ENSOMYG00000028668) ENSOMYG00000069923 ENSOMYG00000028653 ##34 ENSOMYG00000028641 ##36 MERTK (ENSOMYG00000028465) lhcgr (ENSOMYG00000028304) ##23 Oncorhynchus_a ANCESTRAL SPECIES 18 ENSGT00940000157049.c.b.b ENSGT00530000064017.a.f ENSGT00950000182926.b.d.a.a.b.h ENSGT00390000010434.b.d.b ENSGT00510000049375.g ENSGT01060000253683 ENSGT00940000165757.c.a.b ENSGT00940000155293.a.a.i ##8 ENSGT00940000165701.g ##10 ENSGT00950000182836.b.b.b.b.l ##11 ENSGT00940000157846.c.c ##12 ENSGT00390000012017 ENSGT00390000011433.s.a.f ##20 ENSGT00530000063603.B.h ##21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.h.a.a ##22 ENSGT00940000157364.B.d ##23 ENSGT00940000158817.e ##25 ENSGT00390000006820.c ##26 ENSGT00940000159118.g ENSGT00530000063425.a.a.a.b.i.a.a ##28 ENSGT00550000075024 ENSGT00940000161424.k.a ##29 ENSGT00730000111139.m ##31 ENSGT00940000156503.u ##32 ENSGT00940000157396.jc ENSGT00830000128368.b.e ##34 ENSGT00940000156844.b.g.a ##36 ENSGT00940000155669.mc.a ENSGT00940000157364.A ##23 ENSGT00940000153956.a.b.c ##37 Chinook salmon MODERN SPECIES 17 HPSE2 (ENSOTSG00005034422) CNNM1 (ENSOTSG00005034416) got1 (ENSOTSG00005034411) nkx2.3 (ENSOTSG00005034407) nkx3.3 (ENSOTSG00005034405) kcnk1b (ENSOTSG00005034403) ##8 ENSOTSG00005029107 ##10 agpat4 (ENSOTSG00005029064) ##11 THBS2 (ENSOTSG00005027465) ##12 ENSOTSG00005027451 ENSOTSG00005027450 PSME4 (ENSOTSG00005026777) ##20 erlec1 (ENSOTSG00005025375) ##21 ENSOTSG00005025372 ENSOTSG00005025370 NRXN1 (ENSOTSG00005023915) ##22 LHCGR (ENSOTSG00005023894) ##23 STON1 (ENSOTSG00005023892) ##25 ppp1r21 (ENSOTSG00005021526) ##26 FOXN2 (ENSOTSG00005021516) ENSOTSG00005021282 ##28 msh6 (ENSOTSG00005017579) KCNK12 (ENSOTSG00005017576) ##29 GOLGA4 (ENSOTSG00005017572) ##31 itga9 (ENSOTSG00005017301) ##32 ZC3H6 (ENSOTSG00005017280) ENSOTSG00005017277 ##34 ENSOTSG00005017273 ##36 MERTK (ENSOTSG00005017271) lhcgr (ENSOTSG00005017209) ##23 ANKRD1 (ENSOTSG00005017205) ##37 Coho salmon MODERN SPECIES 17 ENSOKIG00005018168 ENSOKIG00005018154 ENSOKIG00005018101 MARVELD1 (ENSOKIG00005018097) ENSOKIG00005018091 ENSOKIG00005018083 kcnk1b (ENSOKIG00005018080) ##8 ENSOKIG00005018075 ENSOKIG00005012935 ##10 agpat4 (ENSOKIG00005012600) ##11 THBS2 (ENSOKIG00005012323) ##12 ENSOKIG00005012263 ENSOKIG00005012249 PSME4 (ENSOKIG00005012067) ##20 ERLEC1 (ENSOKIG00005011136) ##21 NRXN1 (ENSOKIG00005009580) ##22 LHCGR (ENSOKIG00005009460) ##23 STON1 (ENSOKIG00005009449) ##25 ppp1r21 (ENSOKIG00005006947) ##26 FOXN2 (ENSOKIG00005006794) ENSOKIG00005006542 ##28 msh6 (ENSOKIG00005006274) KCNK12 (ENSOKIG00005020653) ##29 GOLGA4 (ENSOKIG00005020615) ##31 itga9 (ENSOKIG00005020483) ##32 ZC3H6 (ENSOKIG00005020439) ENSOKIG00005020425 ##34 ENSOKIG00005020407 ##36 MERTK (ENSOKIG00005020237) lhcgr (ENSOKIG00005020060) ##23 ANKRD1 (ENSOKIG00005020019) ##37 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.h.b.a ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.h.b.a ##22 Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.b.a ##22 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.a.a ##32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.h ##36 ENSGT00940000155669.mc.b ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b Rainbow trout MODERN SPECIES 15 ENSOMYG00000017912 #10 agpat4 (ENSOMYG00000024323) #11 ENSOMYG00000052981 ENSOMYG00000024407 ENSOMYG00000024583 #12 ENSOMYG00000072637 ##13 ENSOMYG00000075183 ENSOMYG00000051807 ENSOMYG00000053929 ENSOMYG00000057002 PSME4 (ENSOMYG00000025175) #20 ENSOMYG00000077387 ENSOMYG00000026216 erlec1 (ENSOMYG00000026232) #21 ENSOMYG00000055620 ENSOMYG00000027535 ##22 ENSOMYG00000054114 NRXN1 (ENSOMYG00000026446) #22 LHCGR (ENSOMYG00000050586) #23 gtf2a1l (ENSOMYG00000037167) #24 STON1 (ENSOMYG00000037153) #25 ppp1r21 (ENSOMYG00000037105) #26 ENSOMYG00000048718 ENSOMYG00000037077 ENSOMYG00000034921 #28 ENSOMYG00000057037 ENSOMYG00000034742 #29 ENSOMYG00000034694 #31 itga9 (ENSOMYG00000034658) ##32 ENSOMYG00000034581 #34 ENSOMYG00000034628 #36 Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155293.a.a.j #8 ENSGT00940000165701.h #10 ENSGT00990000204854.c #9 ENSGT00950000182836.b.b.b.b.k #11 ENSGT00940000157846.c.d #12 ENSGT00390000011433.s.a.e #20 ENSGT00390000007723 ENSGT00530000063603.B.g #21 ENSGT00940000154292.a.b.d.h.b.a ##22 ENSGT00940000154292.a.b.d.h.a.b #22 ENSGT00940000157364.B.c #23 ENSGT00940000163055 #24 ENSGT00940000158817.f #25 ENSGT00390000006820.d #26 ENSGT00940000159118.h ENSGT00530000063425.a.a.a.b.i.a.b #28 ENSGT00940000161424.k.b #29 ENSGT00730000111139.n #31 ENSGT00940000156503.v.a.a ##32 ENSGT00830000128368.b.f #34 ENSGT00940000156844.b.g.b.b ##36 ENSGT00940000155669.mc.b ENSGT00940000153956.a.b.d #37 ENSGT00940000155896.k.b Chinook salmon MODERN SPECIES ENSOTSG00005026863 ENSOTSG00005026866 epas1b (ENSOTSG00005026875) ENSOTSG00005029069 ENSOTSG00005029070 ENSOTSG00005029072 pcgf5a (ENSOTSG00005029077) ENSOTSG00005029087 #37 ENSOTSG00005029089 ENSOTSG00005029093 ##36 ENSOTSG00005029102 #34 GOLGA4 (ENSOTSG00005029110) #31 PSME4 (ENSOTSG00005029152) #20 GPR75 (ENSOTSG00005035805) erlec1 (ENSOTSG00005035877) #21 ENSOTSG00005036153 ##22 NRXN1 (ENSOTSG00005036190) #22 LHCGR (ENSOTSG00005036192) #23 gtf2a1l (ENSOTSG00005036193) #24 ENSOTSG00005036194 #25 ppp1r21 (ENSOTSG00005036205) #26 ENSOTSG00005039080 ENSOTSG00005039081 ENSOTSG00005039082 ENSOTSG00005039089 #28 KCNK12 (ENSOTSG00005039783) #29 Huchen MODERN SPECIES 6159 ENSHHUG00000017629 ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.h.b.b ##22 Huchen MODERN SPECIES 779 ENSHHUG00000029858 ENSHHUG00000029853 ENSHHUG00000029844 med13a (ENSHHUG00000029764) rnft1 (ENSHHUG00000029756) ENSHHUG00000029713 VMP1 (ENSHHUG00000029688) ptrh2 (ENSHHUG00000029646) cltca (ENSHHUG00000029538) ENSHHUG00000029533 ENSHHUG00000029525 ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.g ##22 Huchen MODERN SPECIES 5458 ENSHHUG00000005885 ##22 ENSHHUG00000005889 Northern pike MODERN SPECIES 4 fam135a (ENSELUG00000012515) zgc:172136 (ENSELUG00000001042) TARBP1 (ENSELUG00000012193) ENSELUG00000012130 ENSELUG00000012116 SLC35F3 (ENSELUG00000012062) #7 kcnk1b (ENSELUG00000000431) #8 ENSELUG00000011854 #10 ENSELUG00000011781 agpat4 (ENSELUG00000011759) #11 THBS2 (ENSELUG00000000425) #12 ENSELUG00000001497 PSME4 (ENSELUG00000011276) #20 GPR75 (ENSELUG00000011209) erlec1 (ENSELUG00000011166) #21 nrxn1b (ENSELUG00000011068) #22 LHCGR (ENSELUG00000010744) #23 gtf2a1l (ENSELUG00000034256) #24 STON1 (ENSELUG00000010706) #25 ppp1r21 (ENSELUG00000010645) #26 FOXN2 (ENSELUG00000010538) ENSELUG00000010499 #28 msh6 (ENSELUG00000010431) ENSELUG00000010344 mfsd13a (ENSELUG00000010231) SEMA4G (ENSELUG00000010193) RM43 (ENSELUG00000026129) twnk (ENSELUG00000010089) LZTS2 (ENSELUG00000010065) PDZD7 (ENSELUG00000010038) ENSELUG00000010023 Acanthomorphata ANCESTRAL SPECIES 16 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00390000018525.a.a Cod MODERN SPECIES 6 zgc:172136 (ENSGMOG00000004632) TARBP1 (ENSGMOG00000004549) ENSGMOG00000004533 #7 kcnk1b (ENSGMOG00000034962) #8 ENSGMOG00000004476 #10 ENSGMOG00000036811 agpat4 (ENSGMOG00000004460) #11 ENSGMOG00000004422 #12 ENSGMOG00000002380 ENSGMOG00000034186 ENSGMOG00000002432 ENSGMOG00000030751 PSME4 (ENSGMOG00000016263) #20 ENSGMOG00000037227 erlec1 (ENSGMOG00000016227) #21 NRXN1 (ENSGMOG00000016160) #22 LHCGR (ENSGMOG00000016127) #23 gtf2a1l (ENSGMOG00000029158) #24 STON1 (ENSGMOG00000016089) #25 ppp1r21 (ENSGMOG00000016042) #26 FOXN2 (ENSGMOG00000024029) ENSGMOG00000015987 #28 msh6 (ENSGMOG00000015945) KCNK12 (ENSGMOG00000034834) #29 ENSGMOG00000005864 ENSGMOG00000024309 #31 itga9 (ENSGMOG00000015835) #32 ENSGMOG00000036075 ZC3H6 (ENSGMOG00000034184) ENSGMOG00000015724 #34 ENSGMOG00000015677 #36 Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Pinecone sodierfish MODERN SPECIES 6 fam135a (ENSMMDG00005013183) zgc:172136 (ENSMMDG00005013293) TARBP1 (ENSMMDG00005013311) ENSMMDG00005013332 SLC35F3 (ENSMMDG00005013335) #7 kcnk1b (ENSMMDG00005013338) #8 ENSMMDG00005013425 #10 ENSMMDG00005019250 agpat4 (ENSMMDG00005019251) #11 THBS2 (ENSMMDG00005019253) #12 ENSMMDG00005019254 #12 ENSMMDG00005019255 PSME4 (ENSMMDG00005019266) #20 GPR75 (ENSMMDG00005019444) erlec1 (ENSMMDG00005019450) #21 nrxn1b (ENSMMDG00005019785) #22 LHCGR (ENSMMDG00005020392) #23 gtf2a1l (ENSMMDG00005020427) #24 STON1 (ENSMMDG00005020429) #25 ppp1r21 (ENSMMDG00005001381) #26 FOXN2 (ENSMMDG00005004764) ENSMMDG00005004823 ##28 msh6 (ENSMMDG00005006447) KCNK12 (ENSMMDG00005006452) #29 GOLGA4 (ENSMMDG00005006457) #31 itga9 (ENSMMDG00005006481) #32 ZC3H6 (ENSMMDG00005006600) ENSMMDG00005006606 #34 ENSMMDG00005006636 #36 MERTK (ENSMMDG00005006648) lhcgr (ENSMMDG00005006784) ##23 Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Tiger tail seahorse MODERN SPECIES 177 fam135a (ENSHCOG00000013500) zgc:172136 (ENSHCOG00000013456) ENSHCOG00000013439 ENSHCOG00000013432 SLC35F3 (ENSHCOG00000000387) #7 kcnk1b (ENSHCOG00000013403) #8 ENSHCOG00000013380 #10 ENSHCOG00000013325 agpat4 (ENSHCOG00000013308) #11 THBS2 (ENSHCOG00000013278) #12 ENSHCOG00000013170 ENSHCOG00000013150 PSME4 (ENSHCOG00000013111) #20 GPR75 (ENSHCOG00000013014) erlec1 (ENSHCOG00000013002) #21 nrxn1b (ENSHCOG00000012949) #22 ENSHCOG00000012898 ENSHCOG00000012884 LHCGR (ENSHCOG00000012870) #23 gtf2a1l (ENSHCOG00000012837) #24 STON1 (ENSHCOG00000012828) #25 ppp1r21 (ENSHCOG00000012808) #26 FOXN2 (ENSHCOG00000012727) ENSHCOG00000012708 ##28 msh6 (ENSHCOG00000012671) KCNK12 (ENSHCOG00000012622) #29 GOLGA4 (ENSHCOG00000012610) #31 itga9 (ENSHCOG00000012593) #32 ENSHCOG00000012538 ZC3H6 (ENSHCOG00000012519) ENSHCOG00000012509 #34 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Aplocheiloidei ANCESTRAL SPECIES 28 ENSGT00940000179915 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 Mangrove rivulus MODERN SPECIES 23 ENSKMAG00000017701 col9a1b (ENSKMAG00000017666) fam135a (ENSKMAG00000017630) zgc:172136 (ENSKMAG00000017593) TARBP1 (ENSKMAG00000017546) ENSKMAG00000017523 SLC35F3 (ENSKMAG00000017484) #7 kcnk1b (ENSKMAG00000017469) #8 ENSKMAG00000017351 #10 agpat4 (ENSKMAG00000017310) #11 THBS2 (ENSKMAG00000017188) #12 ENSKMAG00000017139 PSME4 (ENSKMAG00000017056) #20 GPR75 (ENSKMAG00000017037) erlec1 (ENSKMAG00000016984) #21 nrxn1b (ENSKMAG00000016776) #22 LHCGR (ENSKMAG00000016701) #23 gtf2a1l (ENSKMAG00000016635) #24 STON1 (ENSKMAG00000016625) #25 ppp1r21 (ENSKMAG00000016541) #26 FOXN2 (ENSKMAG00000016522) ENSKMAG00000016462 ##28 msh6 (ENSKMAG00000016437) KCNK12 (ENSKMAG00000016419) #29 GOLGA4 (ENSKMAG00000016380) #31 itga9 (ENSKMAG00000016301) #32 ZC3H6 (ENSKMAG00000016252) ENSKMAG00000016219 #34 ENSKMAG00000016189 #36 MERTK (ENSKMAG00000016162) lhcgr (ENSKMAG00000016107) ##23 Turquoise killifish MODERN SPECIES 1612 ENSNFUG00015003588 ENSNFUG00015003593 ENSNFUG00015003595 ADGRB3 (ENSNFUG00015003648) ENSNFUG00015003861 lmbrd1 (ENSNFUG00015003885) ENSNFUG00015003960 ENSNFUG00015003964 ENSNFUG00015003972 ENSNFUG00015003975 THBS2 (ENSNFUG00015004001) #12 ENSNFUG00015004111 PSME4 (ENSNFUG00015004149) #20 GPR75 (ENSNFUG00015004255) ERLEC1 (ENSNFUG00015004262) #21 nrxn1b (ENSNFUG00015004417) #22 ENSNFUG00015005117 ENSNFUG00015005123 ENSNFUG00015005126 LHCGR (ENSNFUG00015005163) #23 ENSNFUG00015005373 GTF2A1L (ENSNFUG00015005378) #25 ppp1r21 (ENSNFUG00015005400) #26 FOXN2 (ENSNFUG00015005477) FBXO11A (ENSNFUG00015005577) ##28 MSH6 (ENSNFUG00015006310) GOLGA4 (ENSNFUG00015006331) #31 itga9 (ENSNFUG00015006486) #32 ZC3H6 (ENSNFUG00015006907) ENSNFUG00015006917 #34 MERTK (ENSNFUG00015006956) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 NAME_4 ANCESTRAL SPECIES 2 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396.f.a ENSGT00940000157396.f.b ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Mummichog MODERN SPECIES 1589 ENSFHEG00000007630 fam135a (ENSFHEG00000000196) zgc:172136 (ENSFHEG00000007604) TARBP1 (ENSFHEG00000007565) ENSFHEG00000007299 SLC35F3 (ENSFHEG00000007283) #7 kcnk1b (ENSFHEG00000007246) #8 ENSFHEG00000007230 #10 ENSFHEG00000007039 agpat4 (ENSFHEG00000007012) #11 THBS2 (ENSFHEG00000006973) #12 ENSFHEG00000006799 PSME4 (ENSFHEG00000006708) #20 GPR75 (ENSFHEG00000006576) erlec1 (ENSFHEG00000006565) #21 nrxn1b (ENSFHEG00000006531) #22 LHCGR (ENSFHEG00000006478) #23 gtf2a1l (ENSFHEG00000006445) #24 STON1 (ENSFHEG00000006436) #25 ppp1r21 (ENSFHEG00000006415) #26 FOXN2 (ENSFHEG00000006340) ENSFHEG00000006317 ##28 ENSFHEG00000006271 msh6 (ENSFHEG00000006256) KCNK12 (ENSFHEG00000006249) #29 GOLGA4 (ENSFHEG00000006230) #31 itga9 (ENSFHEG00000006188) #32 ENSFHEG00000006094 ENSFHEG00000006066 ENSFHEG00000006041 ENSFHEG00000006002 #34 Sheepshead minnow MODERN SPECIES 358 agpat4 (ENSCVAG00000008480) #11 THBS2 (ENSCVAG00000008439) #12 ENSCVAG00000008292 ENSCVAG00000008274 PSME4 (ENSCVAG00000008232) #20 GPR75 (ENSCVAG00000008119) erlec1 (ENSCVAG00000008105) #21 nrxn1b (ENSCVAG00000007981) #22 ENSCVAG00000007886 LHCGR (ENSCVAG00000007870) #23 gtf2a1l (ENSCVAG00000007845) #24 STON1 (ENSCVAG00000007755) #25 ppp1r21 (ENSCVAG00000007743) #26 FOXN2 (ENSCVAG00000007647) ENSCVAG00000007631 ##28 msh6 (ENSCVAG00000007560) KCNK12 (ENSCVAG00000007527) #29 Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000157935.b ENSGT00940000157565.p ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000157935.b ENSGT00940000157565.p ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 NAME_6 DUPLICATION NAME_6 ANCESTRAL SPECIES 727 ENSGT00940000154292.a.b.d.a #22 ENSGT00940000177029.b Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 415 ENSPLAG00000001024 #22 nrxn1b (ENSPLAG00000001023) #22 ENSPLAG00000001020 Sailfin molly MODERN SPECIES 415 ENSPLAG00000001024 #22 nrxn1b (ENSPLAG00000001023) #22 ENSPLAG00000001020 NAME_6 ANCESTRAL SPECIES 73 ENSGT00940000157565.p ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d.b #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Amazon molly MODERN SPECIES 267 ENSPFOG00000023358 ENSPFOG00000012555 ENSPFOG00000012726 fam135a (ENSPFOG00000012899) zgc:172136 (ENSPFOG00000012967) TARBP1 (ENSPFOG00000013020) ENSPFOG00000013269 SLC35F3 (ENSPFOG00000013278) #7 kcnk1b (ENSPFOG00000013354) #8 ENSPFOG00000013390 #10 agpat4 (ENSPFOG00000013562) #11 THBS2 (ENSPFOG00000013623) #12 PSME4 (ENSPFOG00000014029) #20 GPR75 (ENSPFOG00000019996) erlec1 (ENSPFOG00000014456) #21 nrxn1b (ENSPFOG00000014655) #22 LHCGR (ENSPFOG00000015093) #23 gtf2a1l (ENSPFOG00000015159) #24 STON1 (ENSPFOG00000015176) #25 STON1 (ENSPFOG00000024314) #25 ppp1r21 (ENSPFOG00000015194) #26 FOXN2 (ENSPFOG00000015286) ENSPFOG00000015304 ##28 msh6 (ENSPFOG00000015401) KCNK12 (ENSPFOG00000015461) #29 GOLGA4 (ENSPFOG00000015528) #31 itga9 (ENSPFOG00000024558) #32 ENSPFOG00000015736 ZC3H6 (ENSPFOG00000015748) ENSPFOG00000015780 #34 ENSPFOG00000015814 #36 Sailfin molly MODERN SPECIES 2214 ENSPLAG00000005386 #22 Guppy MODERN SPECIES 445 col9a1b (ENSPREG00000022698) fam135a (ENSPREG00000022736) zgc:172136 (ENSPREG00000022743) TARBP1 (ENSPREG00000022753) ENSPREG00000022764 SLC35F3 (ENSPREG00000022773) #7 kcnk1b (ENSPREG00000022780) #8 ENSPREG00000022799 #10 ENSPREG00000022821 agpat4 (ENSPREG00000022826) #11 THBS2 (ENSPREG00000022838) #12 ENSPREG00000022863 PSME4 (ENSPREG00000022914) #20 GPR75 (ENSPREG00000022973) erlec1 (ENSPREG00000022979) #21 nrxn1b (ENSPREG00000023025) #22 ENSPREG00000023061 LHCGR (ENSPREG00000023068) #23 gtf2a1l (ENSPREG00000023073) #24 STON1 (ENSPREG00000023075) #25 ppp1r21 (ENSPREG00000023082) #26 FOXN2 (ENSPREG00000023092) ENSPREG00000023095 ##28 msh6 (ENSPREG00000023099) KCNK12 (ENSPREG00000023105) #29 GOLGA4 (ENSPREG00000023109) #31 itga9 (ENSPREG00000023116) #32 ENSPREG00000023122 ZC3H6 (ENSPREG00000023126) ENSPREG00000023128 #34 ENSPREG00000023132 #36 Platyfish MODERN SPECIES 14 ENSXMAG00000009528 fam135a (ENSXMAG00000009591) zgc:172136 (ENSXMAG00000009593) TARBP1 (ENSXMAG00000009600) ENSXMAG00000026609 SLC35F3 (ENSXMAG00000009605) #7 kcnk1b (ENSXMAG00000009607) #8 ENSXMAG00000009609 #10 agpat4 (ENSXMAG00000009628) #11 THBS2 (ENSXMAG00000003209) #12 ENSXMAG00000024878 ENSXMAG00000010767 PSME4 (ENSXMAG00000010781) #20 GPR75 (ENSXMAG00000019900) erlec1 (ENSXMAG00000010822) #21 nrxn1b (ENSXMAG00000010885) #22 LHCGR (ENSXMAG00000010925) #23 gtf2a1l (ENSXMAG00000021012) #24 STON1 (ENSXMAG00000010933) #25 ppp1r21 (ENSXMAG00000010942) #26 FOXN2 (ENSXMAG00000022841) ENSXMAG00000010970 ##28 msh6 (ENSXMAG00000010986) KCNK12 (ENSXMAG00000010991) #29 GOLGA4 (ENSXMAG00000026123) #31 itga9 (ENSXMAG00000011004) #32 ENSXMAG00000029116 ZC3H6 (ENSXMAG00000020822) ENSXMAG00000011046 #34 ENSXMAG00000011053 #36 MERTK (ENSXMAG00000011065) Oryzias ANCESTRAL SPECIES 6 ENSGT00940000158276 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Oryzias_b ANCESTRAL SPECIES 7 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Javanese ricefish MODERN SPECIES 6 SLC35F3 (ENSOJAG00000015760) #7 kcnk1b (ENSOJAG00000015785) #8 ENSOJAG00000015893 #10 ENSOJAG00000017782 agpat4 (ENSOJAG00000017813) #11 THBS2 (ENSOJAG00000017860) #12 ENSOJAG00000018254 PSME4 (ENSOJAG00000018407) #20 GPR75 (ENSOJAG00000019784) erlec1 (ENSOJAG00000019809) #21 ENSOJAG00000020097 kyat3.2 (ENSOJAG00000020123) ENSOJAG00000020365 psmb11b (ENSOJAG00000020432) slc34a2b (ENSOJAG00000020525) nrxn1b (ENSOJAG00000021126) #22 LHCGR (ENSOJAG00000006489) #23 gtf2a1l (ENSOJAG00000006631) #24 STON1 (ENSOJAG00000006647) #25 ppp1r21 (ENSOJAG00000006701) #26 FOXN2 (ENSOJAG00000007278) ENSOJAG00000007336 ##28 msh6 (ENSOJAG00000007853) KCNK12 (ENSOJAG00000007871) #29 itga9 (ENSOJAG00000007963) #32 ZC3H6 (ENSOJAG00000008720) ENSOJAG00000008730 #34 ENSOJAG00000008751 #36 MERTK (ENSOJAG00000008806) sft2d1 (ENSOJAG00000009225) ENSOJAG00000009238 Indian medaka MODERN SPECIES 27 ENSOMEG00000001566 col9a1b (ENSOMEG00000001556) fam135a (ENSOMEG00000001537) zgc:172136 (ENSOMEG00000001523) ENSOMEG00000001519 ENSOMEG00000001515 SLC35F3 (ENSOMEG00000001511) #7 kcnk1b (ENSOMEG00000001508) #8 ENSOMEG00000001494 #10 agpat4 (ENSOMEG00000001462) #11 THBS2 (ENSOMEG00000001451) #12 ENSOMEG00000001433 PSME4 (ENSOMEG00000001423) #20 GPR75 (ENSOMEG00000001409) erlec1 (ENSOMEG00000001405) #21 nrxn1b (ENSOMEG00000001387) #22 LHCGR (ENSOMEG00000001366) #23 gtf2a1l (ENSOMEG00000001365) #24 STON1 (ENSOMEG00000001360) #25 ppp1r21 (ENSOMEG00000001353) #26 FOXN2 (ENSOMEG00000001346) ENSOMEG00000001341 ##28 msh6 (ENSOMEG00000001336) KCNK12 (ENSOMEG00000001334) #29 GOLGA4 (ENSOMEG00000001329) #31 itga9 (ENSOMEG00000001313) #32 ENSOMEG00000001303 ENSOMEG00000001299 ZC3H6 (ENSOMEG00000001296) ENSOMEG00000001292 #34 ENSOMEG00000001288 #36 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000163514.C ENSGT00940000158276 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000153348.C ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Japanese Medaka HdrR MODERN SPECIES 6 fam135a (ENSORLG00000010498) zgc:172136 (ENSORLG00000010510) TARBP1 (ENSORLG00000010529) SLC35F3 (ENSORLG00000010544) #7 ENSORLG00000010532 kcnk1b (ENSORLG00000010564) #8 ENSORLG00000010603 #10 ENSORLG00000027478 agpat4 (ENSORLG00000010639) #11 PSME4 (ENSORLG00000010828) #20 THBS2 (ENSORLG00000010727) #12 ENSORLG00000010747 GPR75 (ENSORLG00000010839) erlec1 (ENSORLG00000010856) #21 ENSORLG00000023446 NRXN1 (ENSORLG00000010873) #22 ENSORLG00000027978 lhcgr (ENSORLG00000010892) #23 gtf2a1l (ENSORLG00000027977) #24 STON1 (ENSORLG00000010924) #25 ppp1r21 (ENSORLG00000010991) #26 FOXN2 (ENSORLG00000011005) ENSORLG00000011053 ##28 msh6 (ENSORLG00000011074) KCNK12 (ENSORLG00000011086) #29 ENSORLG00000022394 #31 ENSORLG00000029511 #31 ENSORLG00000027825 #31 itga9 (ENSORLG00000011143) #32 exosc5 (ENSORLG00000023035) ENSORLG00000024659 Chinese medaka MODERN SPECIES 247 ENSOSIG00000004114 fam135a (ENSOSIG00000004160) zgc:172136 (ENSOSIG00000004400) TARBP1 (ENSOSIG00000004409) ENSOSIG00000004416 SLC35F3 (ENSOSIG00000004421) #7 kcnk1b (ENSOSIG00000004428) #8 ENSOSIG00000004494 #10 ENSOSIG00000007605 agpat4 (ENSOSIG00000007606) #11 THBS2 (ENSOSIG00000007658) #12 ENSOSIG00000011911 PSME4 (ENSOSIG00000011939) #20 GPR75 (ENSOSIG00000012058) erlec1 (ENSOSIG00000012060) #21 nrxn1b (ENSOSIG00000012149) #22 ENSOSIG00000016362 LHCGR (ENSOSIG00000016365) #23 gtf2a1l (ENSOSIG00000016367) #24 ENSOSIG00000016370 STON1 (ENSOSIG00000016372) #25 ppp1r21 (ENSOSIG00000016378) #26 FOXN2 (ENSOSIG00000016613) ENSOSIG00000016621 ##28 msh6 (ENSOSIG00000016948) KCNK12 (ENSOSIG00000016949) #29 GOLGA4 (ENSOSIG00000016956) #31 itga9 (ENSOSIG00000016972) #32 exosc5 (ENSOSIG00000017145) ENSOSIG00000017147 ZC3H6 (ENSOSIG00000017150) Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000012017.o ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Zebra mbuna MODERN SPECIES 1095 COL9A1 (ENSMZEG00005005703) fam135a (ENSMZEG00005005715) zgc:172136 (ENSMZEG00005005734) TARBP1 (ENSMZEG00005005751) ENSMZEG00005005773 SLC35F3 (ENSMZEG00005005782) #7 kcnk1b (ENSMZEG00005005796) #8 ENSMZEG00005005814 #10 agpat4 (ENSMZEG00005005870) #11 THBS2 (ENSMZEG00005005891) #12 ENSMZEG00005005961 ENSMZEG00005005982 PSME4 (ENSMZEG00005006033) #20 erlec1 (ENSMZEG00005006219) #21 GPR75 (ENSMZEG00005006252) nrxn1b (ENSMZEG00005006282) #22 ENSMZEG00005006330 LHCGR (ENSMZEG00005006356) #23 gtf2a1l (ENSMZEG00005006394) #24 STON1 (ENSMZEG00005006402) #25 ppp1r21 (ENSMZEG00005006418) #26 FOXN2 (ENSMZEG00005006507) ENSMZEG00005006518 ##28 msh6 (ENSMZEG00005006617) KCNK12 (ENSMZEG00005006650) #29 GOLGA4 (ENSMZEG00005006667) #31 itga9 (ENSMZEG00005006723) #32 ENSMZEG00005006766 ZC3H6 (ENSMZEG00005006828) ENSMZEG00005006855 #34 ENSMZEG00005006888 #36 Eastern happy MODERN SPECIES 4 ENSACLG00000002063 fam135a (ENSACLG00000002041) zgc:172136 (ENSACLG00000002029) ENSACLG00000002018 ENSACLG00000002014 SLC35F3 (ENSACLG00000001977) #7 kcnk1b (ENSACLG00000001964) #8 ENSACLG00000001769 #10 agpat4 (ENSACLG00000001626) #11 THBS2 (ENSACLG00000001480) #12 ENSACLG00000001451 PSME4 (ENSACLG00000001144) #20 GPR75 (ENSACLG00000001123) erlec1 (ENSACLG00000001050) #21 ENSACLG00000001006 nrxn1b (ENSACLG00000000616) #22 LHCGR (ENSACLG00000000561) #23 gtf2a1l (ENSACLG00000000542) #24 STON1 (ENSACLG00000000523) #25 ppp1r21 (ENSACLG00000000394) #26 FOXN2 (ENSACLG00000000351) ENSACLG00000000294 ##28 msh6 (ENSACLG00000000235) KCNK12 (ENSACLG00000000222) #29 GOLGA4 (ENSACLG00000000164) #31 itga9 (ENSACLG00000026385) #32 ENSACLG00000026364 ZC3H6 (ENSACLG00000026343) ENSACLG00000026326 #34 ENSACLG00000026318 #36 MERTK (ENSACLG00000026301) P. nyererei MODERN SPECIES 368 fam135a (ENSPNYG00000019229) zgc:172136 (ENSPNYG00000019202) TARBP1 (ENSPNYG00000019135) ENSPNYG00000019119 SLC35F3 (ENSPNYG00000019101) #7 kcnk1b (ENSPNYG00000019085) #8 ENSPNYG00000019026 #10 agpat4 (ENSPNYG00000018995) #11 THBS2 (ENSPNYG00000018915) #12 ENSPNYG00000018875 ENSPNYG00000018847 PSME4 (ENSPNYG00000018711) #20 GPR75 (ENSPNYG00000018685) erlec1 (ENSPNYG00000018639) #21 ENSPNYG00000018620 nrxn1b (ENSPNYG00000018576) #22 LHCGR (ENSPNYG00000018542) #23 gtf2a1l (ENSPNYG00000018511) #24 STON1 (ENSPNYG00000018501) #25 ppp1r21 (ENSPNYG00000018432) #26 FOXN2 (ENSPNYG00000018415) ENSPNYG00000018356 ##28 msh6 (ENSPNYG00000018307) KCNK12 (ENSPNYG00000018298) #29 GOLGA4 (ENSPNYG00000018282) #31 itga9 (ENSPNYG00000018199) #32 ENSPNYG00000018168 ZC3H6 (ENSPNYG00000018130) ENSPNYG00000018097 #34 ENSPNYG00000018074 #36 MERTK (ENSPNYG00000018027) Burton s mouthbrooder MODERN SPECIES 279 zgc:172136 (ENSHBUG00000008861) TARBP1 (ENSHBUG00000008877) ENSHBUG00000008890 SLC35F3 (ENSHBUG00000008916) #7 kcnk1b (ENSHBUG00000008933) #8 ENSHBUG00000008953 ENSHBUG00000009033 #10 agpat4 (ENSHBUG00000009061) #11 THBS2 (ENSHBUG00000009211) #12 ENSHBUG00000009241 ENSHBUG00000009271 PSME4 (ENSHBUG00000009387) #20 GPR75 (ENSHBUG00000009399) erlec1 (ENSHBUG00000009455) #21 ENSHBUG00000009473 nrxn1b (ENSHBUG00000009549) #22 LHCGR (ENSHBUG00000009591) #23 ENSHBUG00000009599 STON1 (ENSHBUG00000009606) #25 ppp1r21 (ENSHBUG00000009707) #26 FOXN2 (ENSHBUG00000009734) ENSHBUG00000009802 ##28 msh6 (ENSHBUG00000009824) KCNK12 (ENSHBUG00000009843) #29 GOLGA4 (ENSHBUG00000009893) #31 itga9 (ENSHBUG00000000257) #32 ENSHBUG00000010078 ZC3H6 (ENSHBUG00000010088) ENSHBUG00000010119 #34 ENSHBUG00000010187 #36 MERTK (ENSHBUG00000010232) Lyretail cichlid MODERN SPECIES 364 col9a1b (ENSNBRG00000014193) fam135a (ENSNBRG00000014275) zgc:172136 (ENSNBRG00000014336) ENSNBRG00000014368 ENSNBRG00000014386 SLC35F3 (ENSNBRG00000014400) #7 kcnk1b (ENSNBRG00000014423) #8 ENSNBRG00000014466 #10 agpat4 (ENSNBRG00000014537) #11 THBS2 (ENSNBRG00000014573) #12 ENSNBRG00000014630 ENSNBRG00000014649 PSME4 (ENSNBRG00000014722) #20 GPR75 (ENSNBRG00000014887) erlec1 (ENSNBRG00000014899) #21 nrxn1b (ENSNBRG00000014934) #22 ENSNBRG00000014987 LHCGR (ENSNBRG00000015006) #23 ENSNBRG00000015035 STON1 (ENSNBRG00000015045) #25 ppp1r21 (ENSNBRG00000015063) #26 FOXN2 (ENSNBRG00000015119) ENSNBRG00000015138 ##28 msh6 (ENSNBRG00000015186) KCNK12 (ENSNBRG00000015224) #29 GOLGA4 (ENSNBRG00000015260) #31 itga9 (ENSNBRG00000015292) #32 ENSNBRG00000015354 ZC3H6 (ENSNBRG00000015382) ENSNBRG00000015417 #34 ENSNBRG00000015438 #36 Nile tilapia MODERN SPECIES 4 fam135a (ENSONIG00000009784) zgc:172136 (ENSONIG00000009786) TARBP1 (ENSONIG00000009789) ENSONIG00000009792 slc35f3 (ENSONIG00000038716) #7 kcnk1 (ENSONIG00000036138) #8 ENSONIG00000009797 #10 ENSONIG00000030253 agpat4 (ENSONIG00000009801) #11 THBS2 (ENSONIG00000009805) #12 ENSONIG00000009817 PSME4 (ENSONIG00000009819) #20 GPR75 (ENSONIG00000021264) erlec1 (ENSONIG00000009830) #21 ENSONIG00000031859 nrxn1b (ENSONIG00000009835) #22 ENSONIG00000039612 gth-rii (ENSONIG00000032593) #23 gtf2a1l (ENSONIG00000033084) #24 STON1 (ENSONIG00000009850) #25 ppp1r21 (ENSONIG00000009853) #26 FOXN2 (ENSONIG00000009856) ENSONIG00000009859 ##28 msh6 (ENSONIG00000009861) KCNK12 (ENSONIG00000009864) #29 GOLGA4 (ENSONIG00000009865) #31 itga9 (ENSONIG00000009870) #32 ENSONIG00000035804 ZC3H6 (ENSONIG00000009880) ENSONIG00000009881 #34 ENSONIG00000009882 #36 Midas cichlid MODERN SPECIES 1196 fam135a (ENSACIG00000020867) zgc:172136 (ENSACIG00000020906) ENSACIG00000020931 ENSACIG00000020943 SLC35F3 (ENSACIG00000020948) #7 kcnk1b (ENSACIG00000020962) #8 ENSACIG00000020995 #10 ENSACIG00000021241 agpat4 (ENSACIG00000021263) #11 THBS2 (ENSACIG00000021287) #12 ENSACIG00000021320 ENSACIG00000021344 PSME4 (ENSACIG00000021367) #20 GPR75 (ENSACIG00000021457) erlec1 (ENSACIG00000021463) #21 nrxn1b (ENSACIG00000021500) #22 ENSACIG00000021537 LHCGR (ENSACIG00000021547) #23 ENSACIG00000021570 STON1 (ENSACIG00000021578) #25 ppp1r21 (ENSACIG00000021597) #26 FOXN2 (ENSACIG00000021633) ENSACIG00000021646 ##28 msh6 (ENSACIG00000021689) KCNK12 (ENSACIG00000021712) #29 ENSACIG00000021721 #31 ENSACIG00000021728 #31 ENSACIG00000021743 #31 itga9 (ENSACIG00000021762) #32 ENSACIG00000021820 ZC3H6 (ENSACIG00000021843) Pomacentridae DUPLICATION Pomacentridae ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.c #22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000154292.a.b.d.c #22 Spiny chromis MODERN SPECIES 1664 ENSAPOG00000008630 #22 Pomacentridae ANCESTRAL SPECIES 9 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Pomacentridae_A ANCESTRAL SPECIES 7 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000011433.s.a.c #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Amphiprion ANCESTRAL SPECIES 175 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017.p ENSGT00390000011433.s.a.c #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d.d #22 Clown anemonefish MODERN SPECIES 3485 ENSAOCG00000010163 col9a1b (ENSAOCG00000010103) fam135a (ENSAOCG00000010024) zgc:172136 (ENSAOCG00000009972) ENSAOCG00000009950 ENSAOCG00000009926 SLC35F3 (ENSAOCG00000009901) #7 kcnk1b (ENSAOCG00000009855) #8 ENSAOCG00000009821 #10 agpat4 (ENSAOCG00000009687) #11 THBS2 (ENSAOCG00000000592) #12 ENSAOCG00000009520 PSME4 (ENSAOCG00000009496) #20 GPR75 (ENSAOCG00000000566) erlec1 (ENSAOCG00000009379) #21 nrxn1b (ENSAOCG00000000563) #22 ENSAOCG00000009076 ENSAOCG00000002025 Orange clownfish MODERN SPECIES 5 fam135a (ENSAPEG00000012871) zgc:172136 (ENSAPEG00000012895) ENSAPEG00000012906 ENSAPEG00000012925 SLC35F3 (ENSAPEG00000012939) #7 kcnk1b (ENSAPEG00000012959) #8 ENSAPEG00000013000 #10 ENSAPEG00000013190 agpat4 (ENSAPEG00000013212) #11 THBS2 (ENSAPEG00000013242) #12 ENSAPEG00000013336 ENSAPEG00000013368 PSME4 (ENSAPEG00000013431) #20 GPR75 (ENSAPEG00000013572) erlec1 (ENSAPEG00000013586) #21 nrxn1b (ENSAPEG00000013674) #22 ENSAPEG00000013754 ENSAPEG00000013767 ENSAPEG00000013785 ENSAPEG00000013794 ENSAPEG00000013828 LHCGR (ENSAPEG00000013866) #23 gtf2a1l (ENSAPEG00000013898) #24 STON1 (ENSAPEG00000013911) #25 ppp1r21 (ENSAPEG00000013951) #26 FOXN2 (ENSAPEG00000014119) ENSAPEG00000014176 ##28 msh6 (ENSAPEG00000014293) KCNK12 (ENSAPEG00000014343) #29 ENSAPEG00000014358 #31 ENSAPEG00000014366 #31 Spiny chromis MODERN SPECIES 945 nrxn1b (ENSAPOG00000002203) #22 nrxn1a (ENSAPOG00000002173) Bicolor damselfish MODERN SPECIES 442 agpat4 (ENSSPAG00000022207) #11 THBS2 (ENSSPAG00000022165) #12 ENSSPAG00000022145 ENSSPAG00000022133 PSME4 (ENSSPAG00000022078) #20 GPR75 (ENSSPAG00000022074) erlec1 (ENSSPAG00000022060) #21 nrxn1b (ENSSPAG00000022027) #22 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00940000158276 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00390000004172.g ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Fugu MODERN SPECIES 16 rsph3 (ENSTRUG00000016315) ENSTRUG00000028842 ENSTRUG00000016320 SLC35F3 (ENSTRUG00000030412) #7 kcnk1b (ENSTRUG00000016334) #8 ENSTRUG00000016338 #10 agpat4 (ENSTRUG00000016354) #11 THBS2 (ENSTRUG00000031037) #12 SLC35F3 (ENSTRUG00000016329) #7 ENSTRUG00000026015 #10 ENSTRUG00000027128 ENSTRUG00000016372 PSME4 (ENSTRUG00000016378) #20 GPR75 (ENSTRUG00000016399) erlec1 (ENSTRUG00000016400) #21 nrxn1b (ENSTRUG00000016409) #22 ENSTRUG00000019977 LHCGR (ENSTRUG00000014020) #23 gtf2a1l (ENSTRUG00000024053) #24 STON1 (ENSTRUG00000013959) #25 ppp1r21 (ENSTRUG00000013766) #26 FOXN2 (ENSTRUG00000013724) ENSTRUG00000013551 ##28 msh6 (ENSTRUG00000013478) KCNK12 (ENSTRUG00000013473) #29 GOLGA4 (ENSTRUG00000013343) #31 itga9 (ENSTRUG00000013012) #32 ZC3H6 (ENSTRUG00000012901) ENSTRUG00000012840 #34 ENSTRUG00000012656 #36 MERTK (ENSTRUG00000012242) Tetraodon MODERN SPECIES 9 fam135a (ENSTNIG00000016584) zgc:172136 (ENSTNIG00000016585) TARBP1 (ENSTNIG00000016586) rsph3 (ENSTNIG00000016587) ENSTNIG00000016588 SLC35F3 (ENSTNIG00000016589) #7 kcnk1b (ENSTNIG00000016590) #8 ENSTNIG00000016591 #10 agpat4 (ENSTNIG00000016592) #11 THBS2 (ENSTNIG00000016593) #12 ENSTNIG00000001688 ENSTNIG00000001096 PSME4 (ENSTNIG00000016594) #20 GPR75 (ENSTNIG00000016595) erlec1 (ENSTNIG00000016596) #21 nrxn1b (ENSTNIG00000016597) #22 LHCGR (ENSTNIG00000016598) #23 STON1 (ENSTNIG00000016599) #25 ppp1r21 (ENSTNIG00000016600) #26 FOXN2 (ENSTNIG00000016601) ENSTNIG00000016602 ##28 msh6 (ENSTNIG00000016603) KCNK12 (ENSTNIG00000016604) #29 ENSTNIG00000016605 #29 GOLGA4 (ENSTNIG00000016606) #31 itga9 (ENSTNIG00000016607) #32 ZC3H6 (ENSTNIG00000016608) ENSTNIG00000016609 #34 TMEM87B (ENSTNIG00000016610) #36 MERTK (ENSTNIG00000016611) sft2d1 (ENSTNIG00000016612) Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Ballan wrasse MODERN SPECIES 51 fam135a (ENSLBEG00000012293) zgc:172136 (ENSLBEG00000012206) TARBP1 (ENSLBEG00000012132) ENSLBEG00000012110 SLC35F3 (ENSLBEG00000012069) #7 kcnk1b (ENSLBEG00000012007) #8 ENSLBEG00000011825 #10 agpat4 (ENSLBEG00000011730) #11 THBS2 (ENSLBEG00000011604) #12 ENSLBEG00000011524 ENSLBEG00000011479 PSME4 (ENSLBEG00000011344) #20 GPR75 (ENSLBEG00000011300) erlec1 (ENSLBEG00000011231) #21 ENSLBEG00000011199 NRXN1 (ENSLBEG00000011110) #22 LHCGR (ENSLBEG00000011063) #23 gtf2a1l (ENSLBEG00000011008) #24 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000158276 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000158276 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 European seabass MODERN SPECIES 1 lmbrd1 (ENSDLAG00005019575) COL19A1 (ENSDLAG00005019537) ENSDLAG00005019500 fam135a (ENSDLAG00005019353) TARBP1 (ENSDLAG00005019113) ENSDLAG00005027323 #7 kcnk1b (ENSDLAG00005027180) #8 ENSDLAG00005019057 ENSDLAG00005015953 #10 agpat4 (ENSDLAG00005015886) #11 ENSDLAG00005015473 #12 ENSDLAG00005015438 ENSDLAG00005014383 #20 ENSDLAG00005014210 #21 ENSDLAG00005030544 NRXN1 (ENSDLAG00005010554) #22 LHCGR (ENSDLAG00005010333) #23 GTF2A1L (ENSDLAG00005032828) #24 PPP1R21 (ENSDLAG00005009826) #26 FOXN2 (ENSDLAG00005033023) ENSDLAG00005009587 ##28 msh6 (ENSDLAG00005009510) ENSDLAG00005026949 #29 ENSDLAG00005008919 #31 itga9 (ENSDLAG00005008689) #32 ZC3H6 (ENSDLAG00005031590) ENSDLAG00005033576 #34 ENSDLAG00005008592 #36 MERTK (ENSDLAG00005008421) lhcgr (ENSDLAG00005008390) ##23 sft2d1 (ENSDLAG00005008313) Large yellow croaker MODERN SPECIES 2 ENSLCRG00005008766 fam135a (ENSLCRG00005008746) zgc:172136 (ENSLCRG00005008743) TARBP1 (ENSLCRG00005008723) ENSLCRG00005008717 SLC35F3 (ENSLCRG00005008715) #7 kcnk1b (ENSLCRG00005008714) #8 ENSLCRG00005008712 ENSLCRG00005002210 #10 agpat4 (ENSLCRG00005002142) #11 THBS2 (ENSLCRG00005001662) #12 ENSLCRG00005001553 PSME4 (ENSLCRG00005016621) #20 GPR75 (ENSLCRG00005016609) erlec1 (ENSLCRG00005016509) #21 nrxn1b (ENSLCRG00005013146) #22 LHCGR (ENSLCRG00005013089) #23 gtf2a1l (ENSLCRG00005013086) #24 STON1 (ENSLCRG00005013085) #25 ppp1r21 (ENSLCRG00005013026) #26 FOXN2 (ENSLCRG00005013024) ENSLCRG00005012816 ##28 msh6 (ENSLCRG00005012814) KCNK12 (ENSLCRG00005012813) #29 GOLGA4 (ENSLCRG00005012812) #31 itga9 (ENSLCRG00005012766) #32 ZC3H6 (ENSLCRG00005012758) ENSLCRG00005012757 #34 ENSLCRG00005012755 #36 MERTK (ENSLCRG00005012751) lhcgr (ENSLCRG00005012747) ##23 Gilthead seabream MODERN SPECIES 6 ENSSAUG00010018490 fam135a (ENSSAUG00010018498) zgc:172136 (ENSSAUG00010018524) TARBP1 (ENSSAUG00010018534) ENSSAUG00010018556 SLC35F3 (ENSSAUG00010018559) #7 kcnk1b (ENSSAUG00010018561) #8 ENSSAUG00010018576 #10 ENSSAUG00010022059 agpat4 (ENSSAUG00010022061) #11 THBS2 (ENSSAUG00010022066) #12 ENSSAUG00010023566 PSME4 (ENSSAUG00010023586) #20 GPR75 (ENSSAUG00010023619) erlec1 (ENSSAUG00010023627) #21 nrxn1b (ENSSAUG00010023767) #22 ENSSAUG00010025536 LHCGR (ENSSAUG00010025540) #23 gtf2a1l (ENSSAUG00010025547) #24 STON1 (ENSSAUG00010025551) #25 ppp1r21 (ENSSAUG00010025560) #26 FOXN2 (ENSSAUG00010025584) ENSSAUG00010025589 ##28 msh6 (ENSSAUG00010025603) KCNK12 (ENSSAUG00010025605) #29 GOLGA4 (ENSSAUG00010025609) #31 itga9 (ENSSAUG00010025640) #32 ENSSAUG00010025649 ZC3H6 (ENSSAUG00010025650) ENSSAUG00010025652 #34 ENSSAUG00010025654 #36 Perciformes ANCESTRAL SPECIES 17 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Perciformes_a ANCESTRAL SPECIES 16 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 Pike perch MODERN SPECIES 10 col9a1b (ENSSLUG00000012722) fam135a (ENSSLUG00000012691) zgc:172136 (ENSSLUG00000012685) TARBP1 (ENSSLUG00000012680) ENSSLUG00000012674 SLC35F3 (ENSSLUG00000012642) #7 kcnk1b (ENSSLUG00000012635) #8 ENSSLUG00000012631 ENSSLUG00000008102 #10 agpat4 (ENSSLUG00000007886) #11 THBS2 (ENSSLUG00000004880) #12 ENSSLUG00000004729 PSME4 (ENSSLUG00000002206) #20 GPR75 (ENSSLUG00000002023) erlec1 (ENSSLUG00000001976) #21 nrxn1b (ENSSLUG00000001201) #22 LHCGR (ENSSLUG00000001062) #23 gtf2a1l (ENSSLUG00000001051) #24 ENSSLUG00000001049 STON1 (ENSSLUG00000001047) #25 ppp1r21 (ENSSLUG00000000856) #26 FOXN2 (ENSSLUG00000000814) ENSSLUG00000000671 ##28 msh6 (ENSSLUG00000000617) KCNK12 (ENSSLUG00000000611) #29 GOLGA4 (ENSSLUG00000000476) #31 itga9 (ENSSLUG00000000343) #32 ZC3H6 (ENSSLUG00000000279) ENSSLUG00000000274 #34 ENSSLUG00000000270 #36 MERTK (ENSSLUG00000000234) Channel bull blenny MODERN SPECIES 6 zgc:172136 (ENSCGOG00000017394) TARBP1 (ENSCGOG00000017378) ENSCGOG00000017375 SLC35F3 (ENSCGOG00000017373) #7 kcnk1b (ENSCGOG00000017372) #8 ENSCGOG00000017370 ENSCGOG00000015745 #10 agpat4 (ENSCGOG00000015457) #11 ENSCGOG00000015057 #12 THBS2 (ENSCGOG00000013876) #12 ENSCGOG00000013851 PSME4 (ENSCGOG00000011892) #20 GPR75 (ENSCGOG00000011823) erlec1 (ENSCGOG00000011559) #21 ENSCGOG00000011552 nrxn1b (ENSCGOG00000008295) #22 LHCGR (ENSCGOG00000007939) #23 gtf2a1l (ENSCGOG00000007932) #24 STON1 (ENSCGOG00000007931) #25 ppp1r21 (ENSCGOG00000006886) #26 FOXN2 (ENSCGOG00000024538) ENSCGOG00000024506 ##28 msh6 (ENSCGOG00000024492) KCNK12 (ENSCGOG00000024491) #29 GOLGA4 (ENSCGOG00000024487) #31 ENSCGOG00000024482 #32 itga9 (ENSCGOG00000024460) #32 ZC3H6 (ENSCGOG00000024447) ENSCGOG00000024444 #34 TMEM87B (ENSCGOG00000024440) #36 MERTK (ENSCGOG00000024432) Cottioidei ANCESTRAL SPECIES 17 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000177029.b ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 Lumpfish MODERN SPECIES 6 pax2a (ENSCLMG00005001773) cuedc2 (ENSCLMG00005001795) hif1an (ENSCLMG00005001801) wnt8b (ENSCLMG00005001839) scdb (ENSCLMG00005001841) trmt2b (ENSCLMG00005001842) dnajb12a (ENSCLMG00005001843) ENSCLMG00005001844 SPOCK2 (ENSCLMG00005001845) tysnd1 (ENSCLMG00005001850) sar1ab (ENSCLMG00005001852) ppa1b (ENSCLMG00005001853) PSME4 (ENSCLMG00005001911) #20 GPR75 (ENSCLMG00005003452) erlec1 (ENSCLMG00005003462) #21 NRXN1 (ENSCLMG00005003554) #22 ENSCLMG00005003599 LHCGR (ENSCLMG00005003605) #23 ENSCLMG00005003616 STON1 (ENSCLMG00005003617) #25 ppp1r21 (ENSCLMG00005003647) #26 FOXN2 (ENSCLMG00005006460) ENSCLMG00005006463 ##28 msh6 (ENSCLMG00005006697) KCNK12 (ENSCLMG00005006707) #29 GOLGA4 (ENSCLMG00005006715) #31 itga9 (ENSCLMG00005007113) #32 ENSCLMG00005007119 ZC3H6 (ENSCLMG00005007120) ENSCLMG00005007121 #34 TMEM87B (ENSCLMG00005007122) #36 Stickleback MODERN SPECIES 6 ENSGACG00000005946 col9a1b (ENSGACG00000005921) fam135a (ENSGACG00000005893) zgc:172136 (ENSGACG00000005885) TARBP1 (ENSGACG00000005865) ENSGACG00000005859 SLC35F3 (ENSGACG00000005849) #7 kcnk1b (ENSGACG00000005832) #8 ENSGACG00000005813 #10 agpat4 (ENSGACG00000005781) #11 THBS2 (ENSGACG00000005771) #12 ENSGACG00000005759 PSME4 (ENSGACG00000005686) #20 ENSGACG00000005682 erlec1 (ENSGACG00000005596) #21 nrxn1b (ENSGACG00000005573) #22 LHCGR (ENSGACG00000005554) #23 STON1 (ENSGACG00000005527) #25 ppp1r21 (ENSGACG00000005491) #26 FOXN2 (ENSGACG00000005486) ENSGACG00000005432 ##28 msh6 (ENSGACG00000005392) KCNK12 (ENSGACG00000005387) #29 GOLGA4 (ENSGACG00000005370) #31 itga9 (ENSGACG00000005354) #32 ZC3H6 (ENSGACG00000005343) ENSGACG00000005336 #34 ENSGACG00000005326 #36 MERTK (ENSGACG00000005304) sft2d1 (ENSGACG00000005268) TBXT (ENSGACG00000005258) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Zig-zag eel MODERN SPECIES 6 TARBP1 (ENSMAMG00000021760) ENSMAMG00000021753 ENSMAMG00000021748 #7 kcnk1b (ENSMAMG00000021745) #8 ENSMAMG00000021743 ENSMAMG00000021703 #10 agpat4 (ENSMAMG00000021738) #11 ENSMAMG00000021682 #12 ENSMAMG00000024937 ENSMAMG00000021677 ENSMAMG00000021668 PSME4 (ENSMAMG00000021658) #20 ENSMAMG00000021657 erlec1 (ENSMAMG00000021651) #21 ENSMAMG00000021645 NRXN1 (ENSMAMG00000021625) #22 LHCGR (ENSMAMG00000021622) #23 gtf2a1l (ENSMAMG00000021615) #24 STON1 (ENSMAMG00000021612) #25 ppp1r21 (ENSMAMG00000021599) #26 FOXN2 (ENSMAMG00000027340) ENSMAMG00000021581 ##28 msh6 (ENSMAMG00000021571) ENSMAMG00000021566 #29 ENSMAMG00000021562 #31 itga9 (ENSMAMG00000021548) #32 ZC3H6 (ENSMAMG00000021546) ENSMAMG00000021537 #34 ENSMAMG00000021535 #36 MERTK (ENSMAMG00000025707) lhcgr (ENSMAMG00000020043) ##23 Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00900000143203 ENSGT00940000165701 #10 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Siamese fighting fish MODERN SPECIES 6 lmbrd1 (ENSBSLG00000022884) ADGRB3 (ENSBSLG00000021586) ENSBSLG00000021389 PHF3 (ENSBSLG00000021295) ENSBSLG00000021276 khdrbs2 (ENSBSLG00000021217) prim2 (ENSBSLG00000021127) agpat4 (ENSBSLG00000020964) #11 THBS2 (ENSBSLG00000019337) #12 ENSBSLG00000019310 PSME4 (ENSBSLG00000017025) #20 GPR75 (ENSBSLG00000015928) erlec1 (ENSBSLG00000015870) #21 ENSBSLG00000015864 ENSBSLG00000015863 nrxn1b (ENSBSLG00000013551) #22 LHCGR (ENSBSLG00000013219) #23 gtf2a1l (ENSBSLG00000020436) #24 STON1 (ENSBSLG00000020435) #25 ppp1r21 (ENSBSLG00000020417) #26 FOXN2 (ENSBSLG00000020404) ENSBSLG00000020227 ##28 msh6 (ENSBSLG00000020212) KCNK12 (ENSBSLG00000020211) #29 GOLGA4 (ENSBSLG00000020174) #31 itga9 (ENSBSLG00000019977) #32 ZC3H6 (ENSBSLG00000019952) ENSBSLG00000019933 #34 ENSBSLG00000019804 #36 MERTK (ENSBSLG00000019749) lhcgr (ENSBSLG00000019732) ##23 Climbing perch MODERN SPECIES 6 zgc:172136 (ENSATEG00000020306) TARBP1 (ENSATEG00000020266) ENSATEG00000020236 #7 kcnk1b (ENSATEG00000025224) #8 ENSATEG00000025457 ENSATEG00000020068 #10 agpat4 (ENSATEG00000020027) #11 ENSATEG00000019901 #12 ENSATEG00000030197 ENSATEG00000019885 PSME4 (ENSATEG00000019773) #20 ENSATEG00000019762 erlec1 (ENSATEG00000019717) #21 ENSATEG00000019697 ENSATEG00000019686 NRXN1 (ENSATEG00000019591) #22 LHCGR (ENSATEG00000019538) #23 gtf2a1l (ENSATEG00000027167) #24 STON1 (ENSATEG00000019499) #25 ppp1r21 (ENSATEG00000019424) #26 FOXN2 (ENSATEG00000019400) ENSATEG00000019323 ##28 msh6 (ENSATEG00000019268) ENSATEG00000019248 #29 ENSATEG00000019186 #31 itga9 (ENSATEG00000019109) #32 ENSATEG00000019078 ENSATEG00000019063 ENSATEG00000019031 #34 ENSATEG00000018993 lhcgr (ENSATEG00000018069) ##23 Carangaria ANCESTRAL SPECIES 19 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Carangaria_A ANCESTRAL SPECIES 29 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Seriola ANCESTRAL SPECIES 14 ENSGT00940000157935.b ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Greater amberjack MODERN SPECIES 30 ENSSDUG00000007087 PSME4 (ENSSDUG00000006984) #20 GPR75 (ENSSDUG00000006967) erlec1 (ENSSDUG00000006899) #21 nrxn1b (ENSSDUG00000006832) #22 LHCGR (ENSSDUG00000006811) #23 gtf2a1l (ENSSDUG00000006789) #24 STON1 (ENSSDUG00000006775) #25 ppp1r21 (ENSSDUG00000006647) #26 FOXN2 (ENSSDUG00000006615) ENSSDUG00000006533 ##28 msh6 (ENSSDUG00000006464) KCNK12 (ENSSDUG00000006438) #29 GOLGA4 (ENSSDUG00000006326) #31 itga9 (ENSSDUG00000006163) #32 ENSSDUG00000006118 ZC3H6 (ENSSDUG00000006105) ENSSDUG00000006046 #34 TMEM87B (ENSSDUG00000006017) #36 MERTK (ENSSDUG00000005985) Yellowtail amberjack MODERN SPECIES 2884 TARBP1 (ENSSLDG00000020200) ENSSLDG00000020256 SLC35F3 (ENSSLDG00000020267) #7 kcnk1b (ENSSLDG00000020290) #8 ENSSLDG00000020326 #10 ENSSLDG00000020518 agpat4 (ENSSLDG00000020541) #11 agpat4 (ENSSLDG00000020579) #11 THBS2 (ENSSLDG00000020615) #12 ENSSLDG00000020689 ENSSLDG00000020712 PSME4 (ENSSLDG00000020757) #20 GPR75 (ENSSLDG00000020978) erlec1 (ENSSLDG00000020984) #21 ENSSLDG00000021040 nrxn1b (ENSSLDG00000021098) #22 LHCGR (ENSSLDG00000021349) #23 gtf2a1l (ENSSLDG00000021374) #24 STON1 (ENSSLDG00000021433) #25 ppp1r21 (ENSSLDG00000021448) #26 FOXN2 (ENSSLDG00000021540) ENSSLDG00000021561 ##28 msh6 (ENSSLDG00000021628) ENSSLDG00000021660 #29 GOLGA4 (ENSSLDG00000021666) #31 itga9 (ENSSLDG00000021690) #32 ENSSLDG00000021799 ZC3H6 (ENSSLDG00000021813) ENSSLDG00000021832 #34 ENSSLDG00000021855 #36 MERTK (ENSSLDG00000021879) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1336 ENSLCAG00010000026 #22 Barramundi perch MODERN SPECIES 169 COL9A1 (ENSLCAG00010017127) fam135a (ENSLCAG00010017105) zgc:172136 (ENSLCAG00010017081) ENSLCAG00010017072 SLC35F3 (ENSLCAG00010017068) #7 kcnk1b (ENSLCAG00010017064) #8 ENSLCAG00010017062 ENSLCAG00010016698 #10 agpat4 (ENSLCAG00010016557) #11 THBS2 (ENSLCAG00010016264) #12 ENSLCAG00010016138 PSME4 (ENSLCAG00010015920) #20 GPR75 (ENSLCAG00010015846) erlec1 (ENSLCAG00010015826) #21 ENSLCAG00010015819 nrxn1b (ENSLCAG00010015182) #22 LHCGR (ENSLCAG00010014915) #23 gtf2a1l (ENSLCAG00010014904) #24 Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000157565 ENSGT00940000162787.c ENSGT00390000003939 ENSGT00940000166602.B ENSGT00390000008727.a.a.d #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00900000143203 ENSGT00950000182836.b.b.b.b #11 ENSGT00940000157846.c #12 ENSGT00390000012017 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000177029.b ENSGT00940000154292.a.b.d #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Tongue sole MODERN SPECIES 3 fam135a (ENSCSEG00000005211) zgc:172136 (ENSCSEG00000005236) TARBP1 (ENSCSEG00000005255) ENSCSEG00000005282 SLC35F3 (ENSCSEG00000005906) #7 kcnk1b (ENSCSEG00000005918) #8 ENSCSEG00000005931 #10 ENSCSEG00000005969 agpat4 (ENSCSEG00000005977) #11 THBS2 (ENSCSEG00000006006) #12 ENSCSEG00000006045 ENSCSEG00000006049 PSME4 (ENSCSEG00000006059) #20 GPR75 (ENSCSEG00000006128) erlec1 (ENSCSEG00000006132) #21 nrxn1b (ENSCSEG00000006156) #22 ENSCSEG00000006277 ENSCSEG00000006279 ENSCSEG00000006282 #23 gtf2a1l (ENSCSEG00000006290) #24 ENSCSEG00000006294 morn4 (ENSCSEG00000006299) ANKRD2 (ENSCSEG00000006304) ##37 st3gal7 (ENSCSEG00000006314) hps1 (ENSCSEG00000006320) HPSE2 (ENSCSEG00000006339) CNNM1 (ENSCSEG00000006403) got1 (ENSCSEG00000006415) nkx2.3 (ENSCSEG00000006432) nkx3.3 (ENSCSEG00000006437) slc25a28 (ENSCSEG00000006441) Turbot MODERN SPECIES 6 ENSSMAG00000006889 col9a1b (ENSSMAG00000006956) fam135a (ENSSMAG00000006999) zgc:172136 (ENSSMAG00000007052) TARBP1 (ENSSMAG00000007081) ENSSMAG00000007120 #7 kcnk1b (ENSSMAG00000007131) #8 ENSSMAG00000007154 #10 ENSSMAG00000007353 agpat4 (ENSSMAG00000007368) #11 ENSSMAG00000007386 #12 ENSSMAG00000007476 PSME4 (ENSSMAG00000007512) #20 ENSSMAG00000007593 erlec1 (ENSSMAG00000007601) #21 NRXN1 (ENSSMAG00000007668) #22 ENSSMAG00000007966 LHCGR (ENSSMAG00000037621) #23 LHCGR (ENSSMAG00000007980) #23 STON1 (ENSSMAG00000008014) #25 PPP1R21 (ENSSMAG00000008023) #26 FOXN2 (ENSSMAG00000008132) ENSSMAG00000008157 ##28 ENSSMAG00000008237 ENSSMAG00000024041 #29 ENSSMAG00000008299 #31 itga9 (ENSSMAG00000008347) #32 ENSSMAG00000008397 ENSSMAG00000008411 ENSSMAG00000008458 #34 ENSSMAG00000008523 Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Salmoninae ANCESTRAL SPECIES 330 ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.f ENSGT00390000012424.a.g ENSGT00390000011640.h ENSGT00940000159867.n ENSGT00940000154644.jb.a.a ENSGT00950000182898.a.a.a.a.a.g.j.b ENSGT00940000154035.a ENSGT00940000161268.j ENSGT00930000151033.c ENSGT00940000159305.o ENSGT00940000163587.a.b.b.e.b.f ENSGT00940000168324.c.b ENSGT00950000183153.c.a.r.f ENSGT00940000160688.l ENSGT00940000159816.h Huchen DUPLICATION Huchen MODERN SPECIES 126 ENSHHUG00000001209 ENSHHUG00000001192 ##22 MAP3K11 (ENSHHUG00000001163) drap1 (ENSHHUG00000001155) ENSHHUG00000001079 rela (ENSHHUG00000000983) ENSHHUG00000000329 ENSHHUG00000000280 ENSHHUG00000000211 ENSHHUG00000000199 POLR2A (ENSHHUG00000000162) capgb (ENSHHUG00000000059) ENSHHUG00000000015 ENSHHUG00000042838 ENSHHUG00000042825 ENSHHUG00000042818 SLC2A4 (ENSHHUG00000042100) Huchen MODERN SPECIES 2688 ENSHHUG00000042900 ##22 MAP3K11 (ENSHHUG00000042889) drap1 (ENSHHUG00000042882) zgc:63470 (ENSHHUG00000042879) rela (ENSHHUG00000042868) ENSHHUG00000042866 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Cyprinodontiformes ANCESTRAL SPECIES 214 ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.g Cyprinodontoidei ANCESTRAL SPECIES 50 ENSGT00390000009529 ENSGT00390000003894 ENSGT01090000260120 ENSGT00940000157535.m.a ENSGT00390000006979.a ENSGT00510000049875 ENSGT00940000164430.a.b.a.d.a ENSGT00940000164430.a.b.a.d.b ENSGT00940000164430.a.b.a.c ENSGT00940000159753 ENSGT00940000160483.k.b ENSGT00940000155978.a.a ENSGT01030000234819 ENSGT00940000163749 ENSGT00940000161064.h ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.g ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000154644.jb.a ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000177059 ENSGT00940000162871 ENSGT00390000018549 ENSGT00940000157250 ENSGT00940000171869.C ENSGT00940000176978.a ENSGT00950000183337 ENSGT00940000157318 ENSGT00390000005589.a.a NAME_4 ANCESTRAL SPECIES 242 ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.h ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000154644.jb.a ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000162871 ENSGT00390000018549 ENSGT00940000157250 ENSGT00940000171869.C ENSGT00940000176978.a ENSGT00940000154521.A ENSGT00940000157318 ENSGT00390000005589.a.a ENSGT01030000234563.b.a.a Sheepshead minnow MODERN SPECIES 174 ENSCVAG00000002955 NRXN2 (ENSCVAG00000002944) ENSCVAG00000002891 ##22 ENSCVAG00000002870 drap1 (ENSCVAG00000002854) rela (ENSCVAG00000023334) zgc:63470 (ENSCVAG00000023330) ENSCVAG00000023324 SLC29A2 (ENSCVAG00000023300) Poeciliinae ANCESTRAL SPECIES 40 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260120 ENSGT00940000157535.m.a ENSGT00390000006979.a ENSGT00510000049875 ENSGT00940000164430.a.b.a.d.a ENSGT00940000164430.a.b.a.d.b ENSGT00940000164430.a.b.a.c ENSGT00940000159753 ENSGT00940000160483.k.b ENSGT00940000155978.a.a ENSGT01030000234819 ENSGT00940000163749 ENSGT00940000161064.h ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.g ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000154644.jb.a ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000177059 ENSGT00940000162871 ENSGT00390000018549 ENSGT00940000157250 ENSGT00940000171869.C ENSGT00940000176978.a.a ENSGT00940000176978.b.b ENSGT00940000176978.a.b ENSGT00940000176978.b.a.a.a Poecilia ANCESTRAL SPECIES 40 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260120 ENSGT00940000157535.m.a ENSGT00390000006979.a ENSGT00510000049875 ENSGT00940000164430.a.b.a.d.a ENSGT00940000164430.a.b.a.d.b ENSGT00940000164430.a.b.a.c ENSGT00940000159753 ENSGT00940000160483.k.b ENSGT00940000155978.a.a ENSGT01030000234819 ENSGT00940000163749 ENSGT00940000161064.h ENSGT00940000154292.a.b.c.a ##22 ENSGT00940000161064.g ENSGT00390000012424.a ENSGT00390000011640 ENSGT00940000159867 ENSGT00940000154644.jb.a ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000177059 ENSGT00940000162871 ENSGT00390000018549 ENSGT00940000157250 ENSGT00940000171869.C ENSGT00940000176978.a.a ENSGT00940000176978.b.b ENSGT00940000176978.a.b ENSGT00940000176978.b.a.a.a Guppy MODERN SPECIES 448 ndufs2 (ENSPREG00000000871) ENSPREG00000000864 ENSPREG00000000818 otub1b (ENSPREG00000000776) cskmt (ENSPREG00000000773) epdl1 (ENSPREG00000000739) ENSPREG00000000696 ENSPREG00000000667 ALPK1 (ENSPREG00000000599) ENSPREG00000000571 RASGRP2 (ENSPREG00000022093) ENSPREG00000022083 ENSPREG00000022074 ENSPREG00000022053 ENSPREG00000022040 ENSPREG00000022028 ##22 MAP3K11 (ENSPREG00000022005) drap1 (ENSPREG00000021987) zgc:63470 (ENSPREG00000021977) rela (ENSPREG00000021967) PPP1CB (ENSPREG00000021947) SLC29A2 (ENSPREG00000021932) ENSPREG00000021925 ENSPREG00000021921 S100P (ENSPREG00000021912) kiaa0232 (ENSPREG00000021904) TBC1D14 (ENSPREG00000021882) ENSPREG00000021864 ENSPREG00000021859 ENSPREG00000021854 ENSPREG00000021842 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Pomacentridae ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Amphiprion ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.a ##22 Clown anemonefish MODERN SPECIES 2386 cratb (ENSAOCG00000010659) ppt2b (ENSAOCG00000010679) rps5 (ENSAOCG00000010721) ENSAOCG00000010756 ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154292.a.b.c.b ##22 Huchen MODERN SPECIES 4940 ENSHHUG00000039843 ENSHHUG00000039839 ##22 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 1 ENSGT00390000008727.a.a.d.i #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00990000204854 #9 ENSGT00940000157846.d ##12 ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029.a.a ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000163749 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00550000074867 ENSGT00950000182980.a.b.b.b.hc ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C ENSGT00390000016617 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01100000263502.B.a.a.d.b.c.b ENSGT00940000155571.B ENSGT00950000183027.a.b.c.b ENSGT00950000183054.b.c Clupeiformes ANCESTRAL SPECIES 508 ENSGT01100000263542.C ENSGT00390000008727.a.a.d.i #7 ENSGT00940000155293.a.a #8 ENSGT00940000157846.d ##12 ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000154292.a.b.a #22 Atlantic herring MODERN SPECIES 7 caprin2 (ENSCHAG00000021803) ipo8 (ENSCHAG00000020555) TMTC1 (ENSCHAG00000020489) ovch1 (ENSCHAG00000020480) lmf2b (ENSCHAG00000019968) entpd1 (ENSCHAG00000019887) slc35f3a (ENSCHAG00000019876) #7 kcnk1a (ENSCHAG00000019870) #8 ENSCHAG00000016817 ##12 ENSCHAG00000016737 psme4b (ENSCHAG00000012630) ##20 chac2 (ENSCHAG00000012521) asb3 (ENSCHAG00000012430) ENSCHAG00000012409 ENSCHAG00000012404 ENSCHAG00000011656 #22 tbc1d22a (ENSCHAG00000010757) cerk (ENSCHAG00000010725) GRAMD4 (ENSCHAG00000009568) ENSCHAG00000009541 tafa5a (ENSCHAG00000009529) PIM3 (ENSCHAG00000009507) ENSCHAG00000009482 ENSCHAG00000009440 ENSCHAG00000009420 ENSCHAG00000009326 USP15 (ENSCHAG00000007794) ENSCHAG00000006632 ENSCHAG00000006524 KDM5A (ENSCHAG00000003306) ENSCHAG00000002998 Denticle herring MODERN SPECIES 6 ENSDCDG00000035910 acsl5 (ENSDCDG00000035911) zdhhc6 (ENSDCDG00000035912) vti1a (ENSDCDG00000013025) tcf7l2 (ENSDCDG00000013241) crygmxl2 (ENSDCDG00000013358) crygmx (ENSDCDG00000013374) aldh18a1 (ENSDCDG00000013580) entpd1 (ENSDCDG00000015703) slc35f3a (ENSDCDG00000015710) #7 kcnk1a (ENSDCDG00000015715) #8 ENSDCDG00000015971 ##12 psme4b (ENSDCDG00000021867) ##20 chac2 (ENSDCDG00000021903) asb3 (ENSDCDG00000021953) ENSDCDG00000022073 #22 fshr (ENSDCDG00000025133) msh2 (ENSDCDG00000025489) mta3 (ENSDCDG00000025739) ENSDCDG00000028550 ENSDCDG00000028579 ENSDCDG00000028580 ENSDCDG00000028582 ENSDCDG00000028585 si:ch211-214j24.10 (ENSDCDG00000028589) osgep (ENSDCDG00000028600) apex1 (ENSDCDG00000028610) zgc:113263 (ENSDCDG00000028617) ENSDCDG00000028625 ENSDCDG00000028629 ENSDCDG00000028634 Otophysi ANCESTRAL SPECIES ENSGT00390000008727.a.a.d.i #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00990000204854 #9 ENSGT00940000157846.d ##12 ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029.a.a ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000163749.b ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 ENSGT00940000161693 ENSGT00390000003178 Characiphysae ANCESTRAL SPECIES 1 ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 ENSGT00390000018109 ENSGT00530000063652.b.a ENSGT00940000155590.i ENSGT00390000004691 ENSGT00940000153514.a.b ENSGT00950000182849.B.c.b.b ENSGT00940000153840.a.a.a.a ENSGT00940000166206 ENSGT00390000016550 ENSGT00930000151032.B ENSGT00940000159080 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 ENSGT00940000161693 ENSGT00940000178131 Channel catfish MODERN SPECIES 4 sar1aa (ENSIPUG00000010046) SPOCK2 (ENSIPUG00000010004) ascc1 (ENSIPUG00000009943) anapc16 (ENSIPUG00000009928) ddit4 (ENSIPUG00000009920) dnajb12 (ENSIPUG00000009889) c13h17orf62 (ENSIPUG00000009877) narf (ENSIPUG00000009858) Slc9a3r1 (ENSIPUG00000009831) mbtd1 (ENSIPUG00000009729) tdrkh (ENSIPUG00000009673) tmem94 (ENSIPUG00000009480) ENSIPUG00000009393 asb3 (ENSIPUG00000009379) ENSIPUG00000009365 ENSIPUG00000008972 #22 fshr (ENSIPUG00000008746) foxn2 (ENSIPUG00000008720) fbxo11 (ENSIPUG00000008553) ##28 MSH2 (ENSIPUG00000008454) ENSIPUG00000008399 CALM (ENSIPUG00000008361) socs5a (ENSIPUG00000008349) gch2 (ENSIPUG00000008326) cript (ENSIPUG00000008308) pigf (ENSIPUG00000008235) RHOQ (ENSIPUG00000008216) cox7a2l (ENSIPUG00000008189) KCNG3 (ENSIPUG00000008184) mta3 (ENSIPUG00000008039) OXER1 (ENSIPUG00000008015) Characiphysae_b ANCESTRAL SPECIES 3 ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 ENSGT00390000018109 ENSGT00530000063652.b.a ENSGT00940000155590.i ENSGT00390000004691 ENSGT00940000153514.a.b ENSGT00950000182849.B.c.b.b ENSGT00940000153840.a.a.a.a ENSGT00940000166206 ENSGT00390000016550 ENSGT00930000151032.B ENSGT00940000159080 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.b ##28 ENSGT00550000074867 ENSGT00390000018245 ENSGT00940000167711.a.a ENSGT00940000164251.c ENSGT00950000182980.a.b.b.b.hc ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C.f ENSGT00390000016617 ENSGT00940000155970 ENSGT00940000154815.b.a ENSGT00940000159658.b.a Characoidei ANCESTRAL SPECIES 6 ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 ENSGT00390000018109 ENSGT00530000063652.b.a ENSGT00940000155590.i ENSGT00390000004691 ENSGT00940000153514.a.b ENSGT00950000182849.B.c.b.b ENSGT00940000153840.a.a.a.a ENSGT00940000166206 ENSGT00390000016550 ENSGT00930000151032.B ENSGT00940000159080 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.b ##28 ENSGT00550000074867 ENSGT00950000182980.a.b.b.b.hc ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C.f ENSGT00390000016617 ENSGT00940000155970 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e.l ENSGT00940000156070.a.b Red-bellied piranha MODERN SPECIES 3 ppa1a (ENSPNAG00000008606) ENSPNAG00000001123 SPOCK2 (ENSPNAG00000008632) ascc1 (ENSPNAG00000008666) anapc16 (ENSPNAG00000008680) ddit4 (ENSPNAG00000001155) dnajb12b (ENSPNAG00000008719) cybc1 (ENSPNAG00000001175) narf (ENSPNAG00000008736) nherf1a (ENSPNAG00000008743) MBTD1 (ENSPNAG00000005449) tdrkh (ENSPNAG00000008783) TMEM94 (ENSPNAG00000008880) ENSPNAG00000008915 asb3 (ENSPNAG00000008926) ENSPNAG00000009070 #22 fshr (ENSPNAG00000009201) foxn2b (ENSPNAG00000009227) ENSPNAG00000009336 ##28 msh2 (ENSPNAG00000009400) ENSPNAG00000009428 calm2b (ENSPNAG00000009449) socs5a (ENSPNAG00000009458) gch2 (ENSPNAG00000009481) cript (ENSPNAG00000009503) pigf (ENSPNAG00000009529) rhoq (ENSPNAG00000009548) cox7a2l (ENSPNAG00000009558) KCNG3 (ENSPNAG00000009567) mta3 (ENSPNAG00000009661) OXER1 (ENSPNAG00000009683) Mexicana tetra MODERN SPECIES 21 SPOCK2 (ENSAMXG00000011715) ascc1 (ENSAMXG00000011705) anapc16 (ENSAMXG00000034010) ddit4 (ENSAMXG00000042715) dnajb12b (ENSAMXG00000029998) cybc1 (ENSAMXG00000040081) narf (ENSAMXG00000011681) nherf1a (ENSAMXG00000011672) MBTD1 (ENSAMXG00000011666) tdrkh (ENSAMXG00000011664) TMEM94 (ENSAMXG00000011661) ENSAMXG00000011641 asb3 (ENSAMXG00000030442) ENSAMXG00000036920 ENSAMXG00000041026 ENSAMXG00000011628 #22 fshr (ENSAMXG00000011613) foxn2b (ENSAMXG00000040568) ENSAMXG00000011591 ##28 msh2 (ENSAMXG00000015880) ENSAMXG00000015893 calm2b (ENSAMXG00000031853) socs5a (ENSAMXG00000025122) gch2 (ENSAMXG00000039949) ENSAMXG00000025123 cript (ENSAMXG00000037075) pigf (ENSAMXG00000041319) rhoq (ENSAMXG00000015971) ENSAMXG00000039574 cox7a2l (ENSAMXG00000030489) KCNG3 (ENSAMXG00000043786) Electric eel MODERN SPECIES 62 ENSEEEG00000016008 SPOCK2 (ENSEEEG00000016016) ascc1 (ENSEEEG00000016020) anapc16 (ENSEEEG00000016023) ddit4 (ENSEEEG00000016026) dnajb12b (ENSEEEG00000016029) cybc1 (ENSEEEG00000016042) narf (ENSEEEG00000016043) nherf1a (ENSEEEG00000016059) MBTD1 (ENSEEEG00000016060) tdrkh (ENSEEEG00000016061) TMEM94 (ENSEEEG00000016077) ENSEEEG00000016441 asb3 (ENSEEEG00000016446) ENSEEEG00000016447 ENSEEEG00000016452 #22 fshr (ENSEEEG00000016483) foxn2b (ENSEEEG00000016493) ENSEEEG00000016499 ##28 msh2 (ENSEEEG00000016977) ENSEEEG00000016980 calm2b (ENSEEEG00000016981) gch2 (ENSEEEG00000016983) cript (ENSEEEG00000016984) pigf (ENSEEEG00000016985) rhoq (ENSEEEG00000016986) cox7a2l (ENSEEEG00000016987) KCNG3 (ENSEEEG00000016988) mta3 (ENSEEEG00000016994) zfp36l2 (ENSEEEG00000017042) ppm1bb (ENSEEEG00000017043) Cyprinoidei ANCESTRAL SPECIES 26 ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000166891.b ENSGT00940000154653 ENSGT01030000234540.A.a.a.w.a ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000154292.a.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.b ##28 ENSGT00550000075024 ENSGT00940000161424.a #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00940000161847.a ENSGT00690000102227 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 ENSGT00940000157364.A ##23 ENSGT00940000161693 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 64 ENSGT00940000164184.f ENSGT00940000156227.f.j ENSGT00940000156625.p ENSGT00940000156232.b.a ENSGT00440000037780.a.y ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ##20 ENSGT00390000003855.a.a ENSGT00940000159080.f ENSGT00940000154292.a.b.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #22 ENSGT00940000158952.h ENSGT00940000159118.p.b ENSGT00530000063425.a.a.b.a ##28 ENSGT00550000074867.r ENSGT00950000182980.a.b.b.b.hc.a ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.e.a ENSGT00390000016617.s ENSGT00940000155970.ab ENSGT00940000154815.b.a.c.a.a ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a ENSGT01030000234573.B.c.b.a.a ENSGT00990000203619.A.b.b.b.a.e.l.c Goldfish MODERN SPECIES 3 AFAP1 (ENSCARG00000014088) rab18a (ENSCARG00000014022) cdca9 (ENSCARG00000013992) mkxa (ENSCARG00000013975) ODAD2 (ENSCARG00000013961) mpp7a (ENSCARG00000012737) waca (ENSCARG00000012662) bambia (ENSCARG00000012651) MAP3K8 (ENSCARG00000012648) MTPAP (ENSCARG00000012640) ENSCARG00000012634 svila (ENSCARG00000012484) psme4b (ENSCARG00000012316) ##20 chac2 (ENSCARG00000012289) asb3 (ENSCARG00000012262) ENSCARG00000006802 #22 foxn2b (ENSCARG00000006556) ENSCARG00000005473 ##28 msh2 (ENSCARG00000005390) calm2b (ENSCARG00000005358) gch2 (ENSCARG00000005337) CRIPT (ENSCARG00000005325) pigf (ENSCARG00000005319) rhoq (ENSCARG00000005311) cox7a2l (ENSCARG00000005302) efna5b (ENSCARG00000005293) dgcr6 (ENSCARG00000005282) RASAL1 (ENSCARG00000005085) DTX1 (ENSCARG00000005016) ENSCARG00000004998 si:ch73-130a3.4 (ENSCARG00000004978) Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00940000164184.f ENSGT00940000156227.f.j ENSGT00940000156625.p ENSGT00940000156232.b.a ENSGT00440000037780.a.y ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ##20 ENSGT00390000003855.a.a ENSGT00940000159080.f ENSGT00940000154292.a.b.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #22 ENSGT00940000158952.h ENSGT00940000159118.p.b ENSGT00530000063425.a.a.b.a ##28 ENSGT00550000074867.r ENSGT00950000182980.a.b.b.b.hc.a ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.f ENSGT00390000016617.s ENSGT00940000155970.ab ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a ENSGT01030000234573.B.c.b.a.a ENSGT00990000203619.A.b.b.b.a.e.l.c ENSGT00940000161584.l.a Common carp reference MODERN SPECIES 25 cdca9 (ENSCCRG00000046835) ENSCCRG00000058055 ENSCCRG00000001507 rab18a (ENSCCRG00000075147) mkxa (ENSCCRG00000073641) ODAD2 (ENSCCRG00000015428) mpp7a (ENSCCRG00000061976) waca (ENSCCRG00000026819) bambia (ENSCCRG00000067488) ENSCCRG00000020144 ENSCCRG00000020143 svila (ENSCCRG00000015186) psme4b (ENSCCRG00000045880) ##20 chac2 (ENSCCRG00000080988) asb3 (ENSCCRG00000045913) ENSCCRG00000080925 #22 ENSCCRG00000047406 foxn2b (ENSCCRG00000067390) ENSCCRG00000002427 ##28 msh2 (ENSCCRG00000061893) calm2b (ENSCCRG00000082265) socs5a (ENSCCRG00000061434) gch2 (ENSCCRG00000067312) cript (ENSCCRG00000019690) pigf (ENSCCRG00000070582) rhoq (ENSCCRG00000019701) cox7a2l (ENSCCRG00000056079) KCNG3 (ENSCCRG00000062429) mta3 (ENSCCRG00000064946) OXER1 (ENSCCRG00000069397) zfp36l2 (ENSCCRG00000066647) Golden-line barbel MODERN SPECIES 385 ENSSGRG00000021643 #22 ENSSGRG00000021846 fshr (ENSSGRG00000021848) foxn2b (ENSSGRG00000021850) ENSSGRG00000021874 ##28 msh2 (ENSSGRG00000022768) calm2b (ENSSGRG00000022781) gch2 (ENSSGRG00000022901) cript (ENSSGRG00000022908) pigf (ENSSGRG00000022912) rhoq (ENSSGRG00000022913) cox7a2l (ENSSGRG00000022914) mta3 (ENSSGRG00000022920) OXER1 (ENSSGRG00000023152) zfp36l2 (ENSSGRG00000023154) ppm1bb (ENSSGRG00000023155) Cyprininae ANCESTRAL SPECIES 88 ENSGT00950000182850.a.b.a.a ENSGT00950000183067.a.a.f ENSGT00940000164184.e ENSGT00940000156227.f.i ENSGT00940000156625.o ENSGT00940000156232.b.b ENSGT00440000037780.a.z ENSGT00940000154101.b.c.b.b ENSGT00940000158806.q ENSGT00940000158582.i ENSGT00940000166891.a.h ENSGT00940000154653.p.b ENSGT00390000011433.s.b.a ##20 ENSGT00390000003855.a.b ENSGT00940000159080.e ENSGT00940000154292.a.b.a.b #22 ENSGT00940000158952.g ENSGT00940000159118.p.a ENSGT00530000063425.a.a.b.b ##28 ENSGT00550000074867.q ENSGT00950000182980.a.b.b.b.hc.b ENSGT00940000164285.a.e.c ENSGT00390000013481.c.b.a.g ENSGT00950000183100.C.f ENSGT00390000016617.t ENSGT00940000155970.bb ENSGT00940000154815.b.a.c.a.b ENSGT00940000159658.b.a.b ENSGT01030000234573.B.c.b.a.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT00940000161584.l.b Goldfish MODERN SPECIES 30 ABLIM2 (ENSCARG00000016243) AFAP1 (ENSCARG00000016271) rab18a (ENSCARG00000016409) mkxa (ENSCARG00000016574) ODAD2 (ENSCARG00000016619) mpp7a (ENSCARG00000016886) waca (ENSCARG00000018680) bambia (ENSCARG00000018753) MAP3K8 (ENSCARG00000018758) MTPAP (ENSCARG00000018770) ENSCARG00000018815 svila (ENSCARG00000019153) psme4b (ENSCARG00000028435) ##20 ENSCARG00000032377 asb3 (ENSCARG00000032386) ENSCARG00000032577 #22 ENSCARG00000038084 ENSCARG00000038088 fshr (ENSCARG00000038097) foxn2b (ENSCARG00000038104) ENSCARG00000038131 ##28 msh2 (ENSCARG00000038661) calm2b (ENSCARG00000039693) socs5a (ENSCARG00000039762) gch2 (ENSCARG00000039792) cript (ENSCARG00000039816) pigf (ENSCARG00000039840) rhoq (ENSCARG00000039851) cox7a2l (ENSCARG00000039886) KCNG3 (ENSCARG00000039891) mta3 (ENSCARG00000040053) Cyprininae_a ANCESTRAL SPECIES 8 ENSGT00950000182850.a.b.a.a ENSGT00950000183067.a.a.f ENSGT00940000164184.e ENSGT00940000156227.f.i ENSGT00940000156625.o ENSGT00940000156232.b.b ENSGT00440000037780.a.z ENSGT00940000154101.b.c.b.b ENSGT00940000158806.q ENSGT00940000158582.i ENSGT00940000166891.a.h ENSGT00940000154653.p.b ENSGT00390000011433.s.b.a ##20 ENSGT00390000003855.a.b ENSGT00940000159080.e ENSGT00940000154292.a.b.a.b #22 ENSGT00940000158952.g ENSGT00940000159118.p.a ENSGT00530000063425.a.a.b.b ##28 ENSGT00550000074867.q ENSGT00950000182980.a.b.b.b.hc.b ENSGT00940000164285.a.e.c ENSGT00390000013481.c.b.a.g ENSGT00950000183100.C.e.b ENSGT00390000016617.t ENSGT00940000155970.bb ENSGT00940000154815.b.a.c.a.a ENSGT00940000159658.b.a.b ENSGT01030000234573.B.c.b.a.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT00940000161584.l.b Common carp reference MODERN SPECIES 44 ENSCCRG00000066542 ENSCCRG00000004777 rab18a (ENSCCRG00000076010) mkxa (ENSCCRG00000004485) ODAD2 (ENSCCRG00000004379) mpp7a (ENSCCRG00000004348) waca (ENSCCRG00000020077) bambia (ENSCCRG00000026806) ENSCCRG00000020148 ENSCCRG00000061636 svila (ENSCCRG00000047293) psme4b (ENSCCRG00000047187) ##20 chac2 (ENSCCRG00000045910) asb3 (ENSCCRG00000015097) ENSCCRG00000007045 ENSCCRG00000005363 #22 fshr (ENSCCRG00000064180) foxn2b (ENSCCRG00000002444) ENSCCRG00000058473 ##28 msh2 (ENSCCRG00000079291) calm2b (ENSCCRG00000064783) socs5a (ENSCCRG00000059664) gch2 (ENSCCRG00000060432) cript (ENSCCRG00000056291) pigf (ENSCCRG00000003343) rhoq (ENSCCRG00000073831) cox7a2l (ENSCCRG00000077249) KCNG3 (ENSCCRG00000005654) mta3 (ENSCCRG00000010443) OXER1 (ENSCCRG00000073858) zfp36l2 (ENSCCRG00000055269) Golden-line barbel MODERN SPECIES 46 ENSSGRG00000046352 ENSSGRG00000044014 #22 fshr (ENSSGRG00000043987) foxn2b (ENSSGRG00000043985) ENSSGRG00000043974 ##28 msh2 (ENSSGRG00000043582) calm2b (ENSSGRG00000043494) socs5a (ENSSGRG00000043490) ENSSGRG00000043489 cript (ENSSGRG00000043488) pigf (ENSSGRG00000043487) rhoq (ENSSGRG00000043483) cox7a2l (ENSSGRG00000043481) mta3 (ENSSGRG00000043259) OXER1 (ENSSGRG00000043254) zfp36l2 (ENSSGRG00000043253) ppm1bb (ENSSGRG00000043251) Otomorpha ANCESTRAL SPECIES 1 ENSGT00940000155535 ENSGT00940000164940.a ENSGT00940000164940.b ENSGT00500000044903.b ENSGT01100000263542.C ENSGT00390000008727.a.a.d.i #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00990000204854 #9 ENSGT00940000157846.d ##12 ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029.a.a ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000163749 ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00550000074867 ENSGT00950000182980.a.b.b.b.hc ENSGT00940000164285.a.e ENSGT00390000013481.c.b.a ENSGT00950000183100.C ENSGT00390000016617 ENSGT00940000154815.b.a ENSGT00940000159658.b.a ENSGT01030000234573.B.c.b.a Clupeiformes ANCESTRAL SPECIES 451 ENSGT00390000011433.s.a #20 ENSGT00390000007723 ENSGT00530000063603.B #21 ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00390000006820 #26 ENSGT00940000162193 ENSGT00550000074857 Denticle herring MODERN SPECIES 18 lhcgr (ENSDCDG00000012143) ##23 MERTK (ENSDCDG00000012177) TMEM87B (ENSDCDG00000012292) #36 ENSDCDG00000012692 #34 ZC3H6 (ENSDCDG00000012701) ENSDCDG00000012704 itga9 (ENSDCDG00000012721) #32 GOLGA4 (ENSDCDG00000012893) #31 KCNK12 (ENSDCDG00000012922) #29 msh6 (ENSDCDG00000013015) fbxo11a (ENSDCDG00000013147) #28 FOXN2 (ENSDCDG00000016671) PSME4 (ENSDCDG00000016685) #20 GPR75 (ENSDCDG00000017197) erlec1 (ENSDCDG00000017206) #21 nrxn1b (ENSDCDG00000017362) #22 LHCGR (ENSDCDG00000022642) #23 gtf2a1l (ENSDCDG00000022763) #24 STON1 (ENSDCDG00000022768) #25 ppp1r21 (ENSDCDG00000022775) #26 exoc1l (ENSDCDG00000022783) smc2 (ENSDCDG00000022793) ENSDCDG00000022824 ENSDCDG00000022827 ENSDCDG00000022830 zgc:172136 (ENSDCDG00000022833) TARBP1 (ENSDCDG00000022839) SLC35F3 (ENSDCDG00000022850) #7 kcnk1b (ENSDCDG00000022861) #8 ENSDCDG00000022901 #10 agpat4 (ENSDCDG00000026056) #11 Atlantic herring MODERN SPECIES 4 ENSCHAG00000024526 ENSCHAG00000024075 ENSCHAG00000024038 ENSCHAG00000024034 ENSCHAG00000024026 ENSCHAG00000024016 ENSCHAG00000024008 ENSCHAG00000024000 ENSCHAG00000023992 PSME4 (ENSCHAG00000022960) #20 GPR75 (ENSCHAG00000022883) erlec1 (ENSCHAG00000022749) #21 ENSCHAG00000022731 ENSCHAG00000022723 ENSCHAG00000022715 NRXN1 (ENSCHAG00000022517) #22 LHCGR (ENSCHAG00000022457) #23 gtf2a1l (ENSCHAG00000022448) #24 STON1 (ENSCHAG00000022435) #25 ppp1r21 (ENSCHAG00000021670) #26 exoc1l (ENSCHAG00000021620) smc2 (ENSCHAG00000021493) FOXN2 (ENSCHAG00000021475) fbxo11a (ENSCHAG00000020377) #28 msh6 (ENSCHAG00000020180) ENSCHAG00000020163 GOLGA4 (ENSCHAG00000019954) #31 ENSCHAG00000019928 ENSCHAG00000019807 #34 ENSCHAG00000019779 #36 ENSCHAG00000019701 Otophysi ANCESTRAL SPECIES ENSGT00940000155535 ENSGT00940000164940.a ENSGT00940000164940.b ENSGT00500000044903.b ENSGT01100000263542.C ENSGT00390000008727.a.a.d.i #7 ENSGT00940000155293.a.a #8 ENSGT00940000165701 #10 ENSGT00990000204854 #9 ENSGT00940000157846.d ##12 ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000177029.a.a ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000163749.b ENSGT00940000177029.a.b ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.a.a ##28 ENSGT00550000075024 ENSGT00940000161424 #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.b #34 Cyprinoidei ANCESTRAL SPECIES 26 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000166891.b ENSGT00940000154653 ENSGT01030000234540.A.a.a.w.a ENSGT00390000011433.s.b ##20 ENSGT00390000003855.a ENSGT00940000159080 ENSGT00940000154292.a.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a #22 ENSGT00940000158952 ENSGT00940000159118 ENSGT00530000063425.a.a.b ##28 ENSGT00550000075024 ENSGT00940000161424.a #29 ENSGT00730000111139 #31 ENSGT00940000156503 #32 ENSGT00940000157396 ENSGT00940000161847.a ENSGT00690000102227 ENSGT00830000128368.b #34 ENSGT00940000156844.b #36 ENSGT00940000155669 Zebrafish MODERN SPECIES 4 ENSDARG00000109285 ENSDARG00000109278 lgi1a (ENSDARG00000020493) EFEMP1 (ENSDARG00000059121) HEATR5B (ENSDARG00000059116) fbxo28 (ENSDARG00000027159) degs1 (ENSDARG00000007347) nvl (ENSDARG00000025605) ENSDARG00000094249 slit1a (ENSDARG00000044954) tp53bp2a (ENSDARG00000009136) ENSDARG00000113766 cutc (ENSDARG00000077306) abcc2 (ENSDARG00000014031) cox15 (ENSDARG00000075933) nrxn1b (ENSDARG00000063635) #22 polh (ENSDARG00000070231) gsta.2 (ENSDARG00000039832) ENSDARG00000113274 ENSDARG00000090228 tmem14a (ENSDARG00000095157) ENSDARG00000117000 ENSDARG00000115762 pcsk2 (ENSDARG00000019451) BFSP1 (ENSDARG00000074919) prokr1b (ENSDARG00000111213) plek (ENSDARG00000104325) cnrip1b (ENSDARG00000037337) ppp3r1a (ENSDARG00000092659) pno1 (ENSDARG00000008502) dnaaf10 (ENSDARG00000037334) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 492 ENSGT00940000156288.b.a.a ENSGT00940000156288.b.a.b ENSGT00940000155043 ENSGT00510000052164.a.e ENSGT00940000159330.e.a ENSGT00940000164645.a ENSGT00940000157837.c.b ENSGT00390000002970.b ENSGT00390000013448.a.a.g ENSGT00940000162611.b.a.a ENSGT00940000157322.b.a.c ENSGT00940000153463.b.a.a ENSGT00940000157798.a ENSGT00940000164383.i ENSGT00390000002223 ENSGT00940000154292.a.b.b.a.a #22 ENSGT00940000154292.a.b.b.a.b #22 ENSGT01090000260030.a.b.a.b.b.a.b.a.a.a.a.b.a.b.a.a.a.b.b ENSGT00950000183052.a.a.b.a.a.b.b Goldfish MODERN SPECIES 4 ENSCARG00000050209 irf1a (ENSCARG00000050166) ENSCARG00000050135 VIT (ENSCARG00000049936) ENSCARG00000049863 HEATR5B (ENSCARG00000048553) ENSCARG00000048507 fbxo28 (ENSCARG00000048502) degs1 (ENSCARG00000048487) nvl (ENSCARG00000048446) ENSCARG00000048431 slit1a (ENSCARG00000046849) tp53bp2a (ENSCARG00000046687) cutc (ENSCARG00000046534) ENSCARG00000044337 ENSCARG00000044154 #22 ENSCARG00000044143 ENSCARG00000044115 pno1 (ENSCARG00000044036) dnaaf10 (ENSCARG00000043739) cnrip1b (ENSCARG00000043719) plek (ENSCARG00000043514) ENSCARG00000017562 prokr1b (ENSCARG00000017551) BFSP1 (ENSCARG00000017522) pcsk2 (ENSCARG00000017217) OTOR (ENSCARG00000017181) GTPBP2 (ENSCARG00000017120) ENSCARG00000017109 tmem14a (ENSCARG00000017089) psmb1 (ENSCARG00000017029) Cyprininae_a ANCESTRAL SPECIES 335 ENSGT00940000156288.b.a.a ENSGT00940000155043.f ENSGT00940000164645.a.d ENSGT00940000157837.c.a ENSGT00390000006205.a ENSGT00390000002970.a.a ENSGT00390000013448.a.a.h ENSGT00570000079239 ENSGT00940000162611.b.a.b ENSGT00940000154965.A ENSGT00940000157322.b.a.d ENSGT00940000153463.b.a.b ENSGT00390000008454 ENSGT00940000164383.j ENSGT00390000002223 ENSGT00940000154292.a.b.b.a.a #22 ENSGT00940000154292.a.b.b.a.b #22 ENSGT00950000183091.A.b.r ENSGT00390000018052.d ENSGT00940000156530.c.`b.b.e.b ENSGT00390000004284.e.a ENSGT00940000157885.a ENSGT00940000166657.d ENSGT00390000016976.d ENSGT00940000156965.d ENSGT00950000182767.b.a.b.b.a ENSGT00940000155636.b.b.b ENSGT00940000158206.d ENSGT00940000154526.a Common carp reference MODERN SPECIES 18 ENSCCRG00000061346 fbxo28 (ENSCCRG00000074796) ENSCCRG00000081311 ENSCCRG00000080849 ENSCCRG00000052847 degs1 (ENSCCRG00000056597) nvl (ENSCCRG00000055816) ENSCCRG00000045777 slit1a (ENSCCRG00000082725) tp53bp2a (ENSCCRG00000034125) cutc (ENSCCRG00000074952) ENSCCRG00000049662 ENSCCRG00000065931 cox15 (ENSCCRG00000001468) ENSCCRG00000049565 #22 ENSCCRG00000015517 #22 dnaaf10 (ENSCCRG00000018475) ENSCCRG00000070863 ENSCCRG00000081490 ENSCCRG00000061026 ENSCCRG00000070978 pno1 (ENSCCRG00000018512) ppp3r1a (ENSCCRG00000065352) plek (ENSCCRG00000015167) cnrip1b (ENSCCRG00000066285) prokr1b (ENSCCRG00000067016) BFSP1 (ENSCCRG00000040795) pcsk2 (ENSCCRG00000040428) ENSCCRG00000063892 OTOR (ENSCCRG00000000836) ENSCCRG00000061866 Golden-line barbel MODERN SPECIES 634 EFEMP1 (ENSSGRG00000017082) HEATR5B (ENSSGRG00000016971) fbxo28 (ENSSGRG00000016962) nvl (ENSSGRG00000016958) ENSSGRG00000016957 slit1a (ENSSGRG00000015861) tp53bp2a (ENSSGRG00000015839) cutc (ENSSGRG00000015761) ENSSGRG00000015605 cox15 (ENSSGRG00000015596) nrxn1b (ENSSGRG00000015595) #22 ENSSGRG00000015594 ENSSGRG00000015593 DNAAF10 (ENSSGRG00000015592) pno1 (ENSSGRG00000015590) ppp3r1a (ENSSGRG00000015588) plek (ENSSGRG00000015416) Cyprininae ANCESTRAL SPECIES 492 ENSGT00940000156288.b.a.b ENSGT00940000155043 ENSGT00510000052164.a.e ENSGT00940000159330.e.a ENSGT00940000164645.a ENSGT00940000157837.c.b ENSGT00390000002970.b ENSGT00390000013448.a.a.g ENSGT00940000162611.b.a.a ENSGT00940000157322.b.a.c ENSGT00940000153463.b.a.a ENSGT00940000157798.a ENSGT00940000164383.i ENSGT00390000002223 ENSGT00940000154292.a.b.b.a.a #22 ENSGT00940000154292.a.b.b.a.b #22 ENSGT01090000260030.a.b.a.b.b.a.b.a.a.a.a.b.a.b.a.a.a.b.b ENSGT00950000183052.a.a.b.a.a.b.b Cyprininae_a ANCESTRAL SPECIES 335 ENSGT00940000155043.f ENSGT00940000164645.a.d ENSGT00940000157837.c.a ENSGT00390000006205.a ENSGT00390000002970.a.a ENSGT00390000013448.a.a.h ENSGT00570000079239 ENSGT00940000162611.b.a.b ENSGT00940000154965.A ENSGT00940000157322.b.a.d ENSGT00940000153463.b.a.b ENSGT00390000008454 ENSGT00940000164383.j ENSGT00390000002223 ENSGT00940000154292.a.b.b.a.a #22 ENSGT00940000154292.a.b.b.a.b #22 ENSGT00950000183091.A.b.r ENSGT00390000018052.d ENSGT00940000156530.c.`b.b.e.b ENSGT00390000004284.e.a ENSGT00940000157885.a ENSGT00940000166657.d ENSGT00390000016976.d ENSGT00940000156965.d ENSGT00950000182767.b.a.b.b.a ENSGT00940000155636.b.b.b ENSGT00940000158206.d ENSGT00940000154526.a Common carp reference MODERN SPECIES 48 lgi1a (ENSCCRG00000068875) ENSCCRG00000036209 ENSCCRG00000073463 fbxo28 (ENSCCRG00000036205) degs1 (ENSCCRG00000067667) ENSCCRG00000080831 slit1a (ENSCCRG00000034390) ENSCCRG00000080800 tp53bp2a (ENSCCRG00000000113) ENSCCRG00000000177 ENSCCRG00000006380 ENSCCRG00000008914 ENSCCRG00000052738 cox15 (ENSCCRG00000049621) ENSCCRG00000063766 ENSCCRG00000030074 #22 ENSCCRG00000070050 ENSCCRG00000059129 ENSCCRG00000066056 ENSCCRG00000004121 ENSCCRG00000056091 ENSCCRG00000077864 ENSCCRG00000070835 ENSCCRG00000060253 ENSCCRG00000068757 dnaaf10 (ENSCCRG00000050061) pno1 (ENSCCRG00000064184) cnrip1b (ENSCCRG00000058935) plek (ENSCCRG00000050078) ENSCCRG00000077993 prokr1b (ENSCCRG00000051227) Golden-line barbel MODERN SPECIES 39 ENSSGRG00000001998 ENSSGRG00000001991 ENSSGRG00000001988 gsk3ab (ENSSGRG00000001965) znf574 (ENSSGRG00000001962) grik5 (ENSSGRG00000001930) ENSSGRG00000001924 ENSSGRG00000001921 tp53bp2a (ENSSGRG00000001920) KCNIP2 (ENSSGRG00000001919) ENSSGRG00000001787 ENSSGRG00000001775 ches1 (ENSSGRG00000001774) ENSSGRG00000001773 ENSSGRG00000001770 nrxn1b (ENSSGRG00000001316) #22 ENSSGRG00000001239 Goldfish MODERN SPECIES 31 ENSCARG00000050618 ENSCARG00000050624 ENSCARG00000050628 ENSCARG00000050645 VIT (ENSCARG00000050687) lgi1a (ENSCARG00000050741) fbxo28 (ENSCARG00000050933) degs1 (ENSCARG00000050939) ENSCARG00000050951 slit1a (ENSCARG00000051117) tp53bp2a (ENSCARG00000053693) KCNIP2 (ENSCARG00000053838) ENSCARG00000053880 cox15 (ENSCARG00000054342) ENSCARG00000054393 nrxn1b (ENSCARG00000054460) #22 ENSCARG00000055712 ENSCARG00000055723 ENSCARG00000055730 ENSCARG00000055736 ENSCARG00000055742 PLPP4 (ENSCARG00000055766) ENSCARG00000056139 XPO5 (ENSCARG00000056212) ENSCARG00000057487 fbln5 (ENSCARG00000057525) ENSCARG00000058326 plek2 (ENSCARG00000058331) si:ch211-10a23.2 (ENSCARG00000058341) Cyprininae ANCESTRAL SPECIES 64 ENSGT00950000183067.a.a.e ENSGT00940000164184.f ENSGT00940000156227.f.j ENSGT00940000156625.p ENSGT00940000156232.b.a ENSGT00440000037780.a.y ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ##20 ENSGT00390000003855.a.a ENSGT00940000159080.f ENSGT00940000154292.a.b.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #22 ENSGT00940000158952.h ENSGT00940000159118.p.b ENSGT00530000063425.a.a.b.a ##28 ENSGT00550000074867.r ENSGT00950000182980.a.b.b.b.hc.a ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.e.a ENSGT00390000016617.s ENSGT00940000155970.ab ENSGT00940000154815.b.a.c.a.a ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00950000183067.a.a.e ENSGT00940000164184.f ENSGT00940000156227.f.j ENSGT00940000156625.p ENSGT00940000156232.b.a ENSGT00440000037780.a.y ENSGT00940000154101.b.c.b.a ENSGT00940000158806.r ENSGT00940000158582.j ENSGT00940000166891.a.g ENSGT00940000154653.p.a ENSGT00390000011433.s.b.b ##20 ENSGT00390000003855.a.a ENSGT00940000159080.f ENSGT00940000154292.a.b.b.b #22 ENSGT00940000177029.a.a ENSGT00940000154292.a.b.a.a #22 ENSGT00940000158952.h ENSGT00940000159118.p.b ENSGT00530000063425.a.a.b.a ##28 ENSGT00550000074867.r ENSGT00950000182980.a.b.b.b.hc.a ENSGT00940000164285.a.e.d ENSGT00390000013481.c.b.a.h ENSGT00950000183100.C.f ENSGT00390000016617.s ENSGT00940000155970.ab ENSGT00940000154815.b.a.d ENSGT00940000159658.b.a.a ENSGT01030000234573.B.c.b.a.a Common carp reference MODERN SPECIES 18 ENSCCRG00000065520 ENSCCRG00000061346 fbxo28 (ENSCCRG00000074796) ENSCCRG00000081311 ENSCCRG00000080849 ENSCCRG00000052847 degs1 (ENSCCRG00000056597) nvl (ENSCCRG00000055816) ENSCCRG00000045777 slit1a (ENSCCRG00000082725) tp53bp2a (ENSCCRG00000034125) cutc (ENSCCRG00000074952) ENSCCRG00000049662 ENSCCRG00000065931 cox15 (ENSCCRG00000001468) ENSCCRG00000049565 #22 ENSCCRG00000015517 #22 dnaaf10 (ENSCCRG00000018475) ENSCCRG00000070863 ENSCCRG00000081490 ENSCCRG00000061026 ENSCCRG00000070978 pno1 (ENSCCRG00000018512) ppp3r1a (ENSCCRG00000065352) plek (ENSCCRG00000015167) cnrip1b (ENSCCRG00000066285) prokr1b (ENSCCRG00000067016) BFSP1 (ENSCCRG00000040795) pcsk2 (ENSCCRG00000040428) ENSCCRG00000063892 OTOR (ENSCCRG00000000836) Golden-line barbel MODERN SPECIES 58 ABLIM2 (ENSSGRG00000025863) AFAP1 (ENSSGRG00000025646) ENSSGRG00000025644 mkxa (ENSSGRG00000025643) ODAD2 (ENSSGRG00000025641) mpp7a (ENSSGRG00000025640) waca (ENSSGRG00000025639) bambia (ENSSGRG00000025637) MAP3K8 (ENSSGRG00000025636) ENSSGRG00000025635 ENSSGRG00000025634 svila (ENSSGRG00000025459) psme4b (ENSSGRG00000025178) ##20 chac2 (ENSSGRG00000025161) asb3 (ENSSGRG00000025160) ENSSGRG00000025157 #22 Characiphysae ANCESTRAL SPECIES 114 ENSGT00940000153745.b.f ENSGT00940000156721 ENSGT00390000013285.g ENSGT00940000156660 ENSGT00940000156351 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00950000182934.a.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00530000063713.b.a ENSGT00940000160184.c.b ENSGT00390000017452 ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000157364.B #23 ENSGT00940000176000 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568.r.a ENSGT00390000006820 #26 ENSGT00440000033965 ENSGT00940000155559.a.a ENSGT00390000018199.b ENSGT00390000014001 ENSGT00390000012785 ENSGT00950000183059.b.a.b.q Channel catfish MODERN SPECIES 21 suclg1 (ENSIPUG00000015947) ENSIPUG00000015942 rps7 (ENSIPUG00000015939) lrrtm1 (ENSIPUG00000015932) ctnna2 (ENSIPUG00000015855) adra1d (ENSIPUG00000015829) ENSIPUG00000015818 ENSIPUG00000015778 smox (ENSIPUG00000015754) rnf24 (ENSIPUG00000015739) FBXO41 (ENSIPUG00000015690) ENSIPUG00000015685 mogs (ENSIPUG00000015678) Mogs (ENSIPUG00000015668) ENSIPUG00000015661 nrxn1b (ENSIPUG00000015520) #22 LHCGR (ENSIPUG00000015402) #23 gtf2a1l (ENSIPUG00000015378) #24 STON1 (ENSIPUG00000015372) #25 rps27a (ENSIPUG00000015317) clhc1 (ENSIPUG00000015255) rtn4 (ENSIPUG00000015207) ppp1r21 (ENSIPUG00000015104) #26 ENSIPUG00000015090 ccdc88a (ENSIPUG00000014755) ppp4r3b (ENSIPUG00000014682) PNPT1 (ENSIPUG00000014624) cfap36 (ENSIPUG00000014596) pld5 (ENSIPUG00000014566) STRN (ENSIPUG00000014190) heatr5b (ENSIPUG00000014110) Characiphysae_b ANCESTRAL SPECIES 341 ENSGT00940000177029.b ENSGT00940000154292.a.b.b #22 ENSGT00940000163749.b Electric eel MODERN SPECIES 187 ENSEEEG00000012101 ADRA1D (ENSEEEG00000012100) smox (ENSEEEG00000012097) rnf24 (ENSEEEG00000012096) FBXO41 (ENSEEEG00000012095) ENSEEEG00000012093 mogs (ENSEEEG00000012091) ENSEEEG00000012090 nrxn1b (ENSEEEG00000012052) #22 Characoidei ANCESTRAL SPECIES 133 ENSGT00940000156074.a.b ENSGT00940000153745.b.f ENSGT00940000156721 ENSGT00390000013285.g ENSGT00940000156660 ENSGT00940000156351 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00950000182934.a.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00530000063713.b.a ENSGT00940000160184.c.b ENSGT00390000017452 ENSGT00940000154292.a.b.b #22 ENSGT00940000163749.b ENSGT00940000157364.B #23 ENSGT00940000163055 #24 ENSGT00940000158817 #25 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568.r.a ENSGT00390000006820 #26 ENSGT00440000033965 ENSGT00940000155559.a.a ENSGT00390000018199.b ENSGT00390000014001 ENSGT00390000012785 ENSGT00950000183059.b.a.b.q Mexicana tetra MODERN SPECIES 13 ENSAMXG00000038878 ENSAMXG00000032330 ENSAMXG00000037149 ENSAMXG00000029932 ENSAMXG00000042821 ENSAMXG00000043772 ENSAMXG00000035261 ENSAMXG00000039503 ENSAMXG00000025549 ENSAMXG00000038836 smox (ENSAMXG00000004855) ENSAMXG00000035254 rnf24 (ENSAMXG00000004867) FBXO41 (ENSAMXG00000037362) mogs (ENSAMXG00000029487) nrxn1b (ENSAMXG00000000283) #22 ENSAMXG00000043081 ENSAMXG00000042595 ENSAMXG00000032474 ENSAMXG00000020132 #23 ENSAMXG00000020139 STON1 (ENSAMXG00000031020) #25 rps27a (ENSAMXG00000040689) ENSAMXG00000020193 ENSAMXG00000042185 ENSAMXG00000040046 ppp1r21 (ENSAMXG00000020345) #26 prorsd1 (ENSAMXG00000025264) CCDC88A (ENSAMXG00000020481) PPP4R3C (ENSAMXG00000020618) PNPT1 (ENSAMXG00000042321) Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 571 NRXN1 (ENSPNAG00000011653) #22 nrxn1a (ENSPNAG00000001860) Red-bellied piranha MODERN SPECIES 156 ENSPNAG00000029014 cisd2 (ENSPNAG00000029003) suclg1 (ENSPNAG00000004480) ENSPNAG00000028976 ctnna2 (ENSPNAG00000028952) LRRTM1 (ENSPNAG00000028901) CTNNA2 (ENSPNAG00000005916) ADRA1D (ENSPNAG00000028861) ENSPNAG00000028860 ENSPNAG00000004447 smox (ENSPNAG00000004442) rnf24 (ENSPNAG00000005051) FBXO41 (ENSPNAG00000028757) ENSPNAG00000028743 mogs (ENSPNAG00000004421) ENSPNAG00000004415 #22 Osteoglossiformes ANCESTRAL SPECIES 463 ENSGT01100000263542.C ENSGT00940000157846.d ##12 ENSGT00390000011433.s.a.h #20 ENSGT00940000159080 ENSGT00940000177029.a.b ENSGT00940000154292.a.b #22 ENSGT00940000158952 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 344 aldh18a1 (ENSPKIG00000001496) crygmxl2 (ENSPKIG00000001474) tcf7l2 (ENSPKIG00000001419) vti1a (ENSPKIG00000001358) zdhhc6 (ENSPKIG00000001306) acsl5 (ENSPKIG00000001235) ENSPKIG00000001130 tectb (ENSPKIG00000001093) ENSPKIG00000001083 GPAM (ENSPKIG00000000983) kcnk1a (ENSPKIG00000000958) #8 THBS2 (ENSPKIG00000000928) ##12 asb3 (ENSPKIG00000024768) ENSPKIG00000024756 ENSPKIG00000024637 #22 fbxo11a (ENSPKIG00000024461) #28 P. kingsleyae MODERN SPECIES 184 nrxn1b (ENSPKIG00000002163) #22 ENSPKIG00000002440 LHCGR (ENSPKIG00000002456) #23 GTF2A1L (ENSPKIG00000002477) #24 ENSPKIG00000002489 #24 STON1 (ENSPKIG00000002500) #25 ppp1r21 (ENSPKIG00000002532) #26 FOXN2 (ENSPKIG00000002583) ENSPKIG00000002607 ##28 msh6 (ENSPKIG00000002633) ENSPKIG00000002664 ENSPKIG00000002703 ncoa4 (ENSPKIG00000002720) TIMM23B (ENSPKIG00000002755) QKI (ENSPKIG00000002778) ENSPKIG00000002797 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 18 GPAM (ENSSFOG00015021655) tectb (ENSSFOG00015021623) acsl5 (ENSSFOG00015021510) zdhhc6 (ENSSFOG00015021479) vti1a (ENSSFOG00015021444) tcf7l2 (ENSSFOG00015021035) crygmxl2 (ENSSFOG00015020974) aldh18a1 (ENSSFOG00015020936) entpd1 (ENSSFOG00015020906) SLC35F3 (ENSSFOG00015020900) #7 kcnk1a (ENSSFOG00015020890) #8 THBS2 (ENSSFOG00015020833) ##12 PSME4 (ENSSFOG00015020760) #20 asb3 (ENSSFOG00015030774) ENSSFOG00015030631 ENSSFOG00015020525 #22 fshr (ENSSFOG00015028734) ENSSFOG00015031167 fshr (ENSSFOG00015024708) tbcc (ENSSFOG00015005101) ENSSFOG00015005107 ENSSFOG00015005144 ENSSFOG00015005172 ENSSFOG00015005226 ENSSFOG00015030730 ENSSFOG00015018258 ENSSFOG00015008642 ENSSFOG00015005951 ENSSFOG00015005185 ENSSFOG00015029926 ENSSFOG00015032448 Asian bonytongue MODERN SPECIES 19 otub1a (ENSSFOG00015031352) ENSSFOG00015021850 NRG2 (ENSSFOG00015025951) puraa (ENSSFOG00015029820) PSD2 (ENSSFOG00015021796) ENSSFOG00015025909 CXXC5 (ENSSFOG00015028761) ube2d2 (ENSSFOG00015021755) ENSSFOG00015021741 dnajc18 (ENSSFOG00015021720) BRD8 (ENSSFOG00015021698) RASGRP2 (ENSSFOG00015021580) NRXN2 (ENSSFOG00015021521) ENSSFOG00015021551 MAP3K11 (ENSSFOG00015024467) ENSSFOG00015024612 #22 MAP3K11 (ENSSFOG00015021499) PCNX3 (ENSSFOG00015021443) zgc:165604 (ENSSFOG00015021420) drap1 (ENSSFOG00015021405) rela (ENSSFOG00015021380) PPP1CB (ENSSFOG00015021367) SLC29A2 (ENSSFOG00015021337) cfbl (ENSSFOG00015021195) bbs1 (ENSSFOG00015021161) CAPN1 (ENSSFOG00015021141) sf3b2 (ENSSFOG00015021125) pacs1a (ENSSFOG00015021082) actn3b (ENSSFOG00015021040) GAL3ST3 (ENSSFOG00015021031) ENSSFOG00015021013 Asian bonytongue MODERN SPECIES 23 SMOC2 (ENSSFOG00015002962) dact2 (ENSSFOG00015002843) zgc:172136 (ENSSFOG00015002811) TARBP1 (ENSSFOG00015002660) ENSSFOG00015026660 SLC35F3 (ENSSFOG00015002610) #7 kcnk1b (ENSSFOG00015002601) #8 ENSSFOG00015002445 #10 agpat4 (ENSSFOG00015002397) #11 ENSSFOG00015002253 #12 ENSSFOG00015002220 PSME4 (ENSSFOG00015002060) #20 GPR75 (ENSSFOG00015002045) erlec1 (ENSSFOG00015001975) #21 chac2 (ENSSFOG00015001968) nrxn1b (ENSSFOG00015001893) #22 LHCGR (ENSSFOG00015001859) #23 ENSSFOG00015026862 STON1 (ENSSFOG00015001840) #25 ppp1r21 (ENSSFOG00015001831) #26 FOXN2 (ENSSFOG00015001820) ENSSFOG00015001698 ##28 msh6 (ENSSFOG00015001648) KCNK12 (ENSSFOG00015001638) #29 epcam (ENSSFOG00015001618) ENSSFOG00015001588 ENSSFOG00015024584 calm2a (ENSSFOG00015001500) TTC7A (ENSSFOG00015001488) mcfd2 (ENSSFOG00015001471) ENSSFOG00015001463 Spotted gar MODERN SPECIES 654 SMOC2 (ENSLOCG00000016200) dact2 (ENSLOCG00000016207) ENSLOCG00000016209 TARBP1 (ENSLOCG00000016214) slc35f3a (ENSLOCG00000016220) #7 kcnk1a (ENSLOCG00000016222) #8 MAP3K4 (ENSLOCG00000016223) agpat4 (ENSLOCG00000016235) #11 THBS2 (ENSLOCG00000016241) #12 ENSLOCG00000016248 psme4b (ENSLOCG00000016250) #20 GPR75 (ENSLOCG00000017362) erlec1 (ENSLOCG00000016265) #21 chac2 (ENSLOCG00000016270) ASB3 (ENSLOCG00000016273) nrxn1b (ENSLOCG00000016276) #22 fshr (ENSLOCG00000016280) ENSLOCG00000016282 ##23 STON1 (ENSLOCG00000016284) #25 ppp1r21 (ENSLOCG00000016286) #26 foxn2b (ENSLOCG00000016292) FBXO11 (ENSLOCG00000016294) ##28 msh6 (ENSLOCG00000016298) KCNK12 (ENSLOCG00000016299) #29 msh2 (ENSLOCG00000016301) epcam (ENSLOCG00000016306) ENSLOCG00000016309 ENSLOCG00000016311 calm2a (ENSLOCG00000016313) si:ch211-93n23.7 (ENSLOCG00000016315) TTC7A (ENSLOCG00000016316)