Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000003122 #22
Gnathostomata	ANCESTRAL SPECIES	4											ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000156399	ENSGT00730000110872.a
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247
Amniota	ANCESTRAL SPECIES	4	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Mammalia	ANCESTRAL SPECIES	10	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Theria	DUPLICATION
Theria	DUPLICATION
Theria	ANCESTRAL SPECIES	11	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Eutheria	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Primates	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Simiiformes	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a	ENSGT00550000074949	ENSGT00940000155679
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.a	ENSGT00550000074949	ENSGT00940000155679
Cebidae	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.b	ENSGT00390000010283.`b.a.b.a
Marmoset	MODERN SPECIES	11	AGGF1 (ENSCJAG00000019955) #7	ZBED3 (ENSCJAG00000019950) #8	PDE8B (ENSCJAG00000019876) #9	WDR41 (ENSCJAG00000019853) #10	OTP (ENSCJAG00000071567) #11	ENSCJAG00000085518 #12	ENSCJAG00000072122 #13	ENSCJAG00000019848 #14	ENSCJAG00000071117 #15	ENSCJAG00000085539 #16	AP3B1 (ENSCJAG00000019804) #17	SCAMP1 (ENSCJAG00000019794) #18	LHFPL2 (ENSCJAG00000085814) #19	ENSCJAG00000081984 #20	DMGDH (ENSCJAG00000019768) #21	BHMT2 (ENSCJAG00000019766) #22	BHMT (ENSCJAG00000059013) #23	ENSCJAG00000080099 #24	ENSCJAG00000084621 #25	ENSCJAG00000079194 #26	JMY (ENSCJAG00000019743) #27	ENSCJAG00000077110 #28	HOMER1 (ENSCJAG00000019722) #29	ENSCJAG00000076921 #30	CMYA5 (ENSCJAG00000019709) #31	MTX3 (ENSCJAG00000019700) #32	ENSCJAG00000075688 #33	THBS4 (ENSCJAG00000019641) #34	ENSCJAG00000076770 #35	SERINC5 (ENSCJAG00000019619) #36	ZFYVE16 (ENSCJAG00000019584) #37
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00510000047029.z.e	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.b	ENSGT00550000074949
Capuchin	MODERN SPECIES	50	CRHBP (ENSCCAG00000017626)	AGGF1 (ENSCCAG00000023174) #7	PDE8B (ENSCCAG00000035315) #9	ENSCCAG00000024360 #10	ENSCCAG00000033428	OTP (ENSCCAG00000028580) #11	TBCA (ENSCCAG00000034960) ##14	ENSCCAG00000036687	AP3B1 (ENSCCAG00000024221) #17	ENSCCAG00000001996	SCAMP1 (ENSCCAG00000020394) #18	LHFPL2 (ENSCCAG00000034151) #19	ARSB (ENSCCAG00000026253)	DMGDH (ENSCCAG00000029570) #21	ENSCCAG00000025862	BHMT2 (ENSCCAG00000025343) #22	BHMT (ENSCCAG00000001311) #23	JMY (ENSCCAG00000020292) #27
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a
Hominidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a
Human	MODERN SPECIES	17	F2RL1 (ENSG00000164251)	S100Z (ENSG00000171643)	CRHBP (ENSG00000145708)	AGGF1 (ENSG00000164252) #7	ZBED3 (ENSG00000132846) #8	ENSG00000284762	PDE8B (ENSG00000113231) #9	WDR41 (ENSG00000164253) #10	OTP (ENSG00000171540) #11	TBCA (ENSG00000171530) #14	AP3B1 (ENSG00000132842) #17	SCAMP1 (ENSG00000085365) #18	LHFPL2 (ENSG00000145685) #19	ARSB (ENSG00000113273)	DMGDH (ENSG00000132837) #21	BHMT2 (ENSG00000132840) #22	BHMT (ENSG00000145692) #23	JMY (ENSG00000152409) #27	HOMER1 (ENSG00000152413) #29	TENT2 (ENSG00000164329)	CMYA5 (ENSG00000164309) #31	MTX3 (ENSG00000177034) #32	THBS4 (ENSG00000113296) #34	SERINC5 (ENSG00000164300) #36	SPZ1 (ENSG00000164299)	ZFYVE16 (ENSG00000039319) #37	FAM151B (ENSG00000152380)	ANKRD34B (ENSG00000189127)	DHFR (ENSG00000228716)	MSH3 (ENSG00000113318)	RASGRF2 (ENSG00000113319)
Gorilla	MODERN SPECIES	8	AGGF1 (ENSGGOG00000010269) #7	ZBED3 (ENSGGOG00000002896) #8	ENSGGOG00000037102	ENSGGOG00000039702	PDE8B (ENSGGOG00000005317) #9	WDR41 (ENSGGOG00000026798) #10	ENSGGOG00000027406	OTP (ENSGGOG00000015687) #11	ENSGGOG00000023547 #14	ENSGGOG00000027597	AP3B1 (ENSGGOG00000001771) #17	SCAMP1 (ENSGGOG00000015191) #18	LHFPL2 (ENSGGOG00000003771) #19	ARSB (ENSGGOG00000010450)	DMGDH (ENSGGOG00000003203) #21	BHMT2 (ENSGGOG00000003210) #22	BHMT (ENSGGOG00000007558) #23	JMY (ENSGGOG00000008560) #27	ENSGGOG00000043244 #28	HOMER1 (ENSGGOG00000000986) #29	TENT2 (ENSGGOG00000023154)	CMYA5 (ENSGGOG00000006288) #31	MTX3 (ENSGGOG00000003916) #32	THBS4 (ENSGGOG00000027002) #34	SERINC5 (ENSGGOG00000016060) #36	ENSGGOG00000016146	ZFYVE16 (ENSGGOG00000000411) #37	FAM151B (ENSGGOG00000016422)	ANKRD34B (ENSGGOG00000040274)	ENSGGOG00000027943	ENSGGOG00000042760
Orangutan	MODERN SPECIES	18	S100Z (ENSPPYG00000015572)	CRHBP (ENSPPYG00000015573)	AGGF1 (ENSPPYG00000015574) #7	ZBED3 (ENSPPYG00000015575) #8	PDE8B (ENSPPYG00000015576) #9	ENSPPYG00000030861	WDR41 (ENSPPYG00000015577) #10	OTP (ENSPPYG00000015578) #11	TBCA (ENSPPYG00000015579) #14	ENSPPYG00000040806	AP3B1 (ENSPPYG00000015580) #17	SCAMP1 (ENSPPYG00000015581) #18	LHFPL2 (ENSPPYG00000015582) #19	ARSB (ENSPPYG00000015583)	DMGDH (ENSPPYG00000015584) #21	BHMT2 (ENSPPYG00000015585) #22	BHMT (ENSPPYG00000015586) #23	JMY (ENSPPYG00000015588) #27	HOMER1 (ENSPPYG00000015589) #29	ENSPPYG00000011137 #28	TENT2 (ENSPPYG00000015590)	CMYA5 (ENSPPYG00000015591) #31	MTX3 (ENSPPYG00000015592) #32	THBS4 (ENSPPYG00000015593) #34	SERINC5 (ENSPPYG00000015594) #36	SPZ1 (ENSPPYG00000015595)	ENSPPYG00000037278	ENSPPYG00000015596	ZFYVE16 (ENSPPYG00000015597) #37	FAM151B (ENSPPYG00000015598)	ANKRD34B (ENSPPYG00000015599)
Gibbon	MODERN SPECIES	11	S100Z (ENSNLEG00000012623)	CRHBP (ENSNLEG00000012627)	AGGF1 (ENSNLEG00000026907) #7	PDE8B (ENSNLEG00000012655) #9	ENSNLEG00000028936	WDR41 (ENSNLEG00000012712) #10	OTP (ENSNLEG00000012728) #11	TBCA (ENSNLEG00000012734) #14	ENSNLEG00000012739	AP3B1 (ENSNLEG00000012740) #17	SCAMP1 (ENSNLEG00000029924) #18	LHFPL2 (ENSNLEG00000035509) #19	ENSNLEG00000018637	ARSB (ENSNLEG00000012786)	DMGDH (ENSNLEG00000012801) #21	BHMT2 (ENSNLEG00000012819) #22	BHMT (ENSNLEG00000012840) #23	JMY (ENSNLEG00000012852) #27	HOMER1 (ENSNLEG00000012860) #29	TENT2 (ENSNLEG00000027224)	CMYA5 (ENSNLEG00000012895) #31	ENSNLEG00000012915 #32	THBS4 (ENSNLEG00000012916) #34	SERINC5 (ENSNLEG00000012931) #36	ENSNLEG00000012943	SPZ1 (ENSNLEG00000018597)	ENSNLEG00000033746	ENSNLEG00000018598	ZFYVE16 (ENSNLEG00000012945) #37	ENSNLEG00000034030	FAM151B (ENSNLEG00000012975)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b
Rhinopithecus	ANCESTRAL SPECIES	211														ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Golden snub-nosed monkey	MODERN SPECIES	1126														ARSB (ENSRROG00000032497)	DMGDH (ENSRROG00000037133) #21	BHMT2 (ENSRROG00000039156) #22	BHMT (ENSRROG00000027828) #23	JMY (ENSRROG00000031443) #27	ENSRROG00000034090	HOMER1 (ENSRROG00000029491) #29
Black snub-nosed monkey	MODERN SPECIES	353														ARSB (ENSRBIG00000043089)	DMGDH (ENSRBIG00000040935) #21	BHMT2 (ENSRBIG00000034295) #22	BHMT (ENSRBIG00000044465) #23	JMY (ENSRBIG00000044251) #27	HOMER1 (ENSRBIG00000026863) #29	TENT2 (ENSRBIG00000028874)	CMYA5 (ENSRBIG00000029005) #31	MTX3 (ENSRBIG00000032362) #32	THBS4 (ENSRBIG00000031443) #34	SERINC5 (ENSRBIG00000030587) #36	SPZ1 (ENSRBIG00000034721)	ENSRBIG00000037215	ENSRBIG00000039434	FAM151B (ENSRBIG00000029388)	ANKRD34B (ENSRBIG00000041216)	ENSRBIG00000040129	MSH3 (ENSRBIG00000005363)
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b
Vervet Monkey	MODERN SPECIES	23	F2RL1 (ENSCSAG00000015342)	CRHBP (ENSCSAG00000015337)	ENSCSAG00000015331	AGGF1 (ENSCSAG00000015324) #7	ZBED3 (ENSCSAG00000019417) #8	PDE8B (ENSCSAG00000015317) #9	WDR41 (ENSCSAG00000015310) #10	OTP (ENSCSAG00000015302) #11	ENSCSAG00000015299	AP3B1 (ENSCSAG00000015290) #17	SCAMP1 (ENSCSAG00000015275) #18	ENSCSAG00000019418	LHFPL2 (ENSCSAG00000015267) #19	ARSB (ENSCSAG00000015262)	DMGDH (ENSCSAG00000015255) #21	BHMT2 (ENSCSAG00000015246) #22	BHMT (ENSCSAG00000015241) #23	JMY (ENSCSAG00000015236) #27	HOMER1 (ENSCSAG00000015226) #29	ENSCSAG00000019419 #28	TENT2 (ENSCSAG00000015221)	ENSCSAG00000015214	CMYA5 (ENSCSAG00000015197) #31	MTX3 (ENSCSAG00000015189) #32	THBS4 (ENSCSAG00000015181) #34	SERINC5 (ENSCSAG00000015170) #36	SPZ1 (ENSCSAG00000019420)	ZFYVE16 (ENSCSAG00000015157) #37	FAM151B (ENSCSAG00000015145)	ANKRD34B (ENSCSAG00000019421)	DHFR (ENSCSAG00000015136)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00390000009710.k.a #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a
Macaca	ANCESTRAL SPECIES																	ENSGT00390000003122.c.b #22
Pig-tailed macaque	MODERN SPECIES	533	CRHBP (ENSMNEG00000039318)	AGGF1 (ENSMNEG00000044235) #7	ENSMNEG00000036640	ENSMNEG00000042545	PDE8B (ENSMNEG00000045435) #9	WDR41 (ENSMNEG00000020110) #10	OTP (ENSMNEG00000033198) #11	ENSMNEG00000044207 #14	ENSMNEG00000004983	ENSMNEG00000041744	AP3B1 (ENSMNEG00000043246) #17	SCAMP1 (ENSMNEG00000028211) #18	LHFPL2 (ENSMNEG00000031372) #19	ARSB (ENSMNEG00000045377)	DMGDH (ENSMNEG00000026178) #21	BHMT2 (ENSMNEG00000036544) #22	JMY (ENSMNEG00000043109) #27	ENSMNEG00000037635	HOMER1 (ENSMNEG00000013996) #29	TENT2 (ENSMNEG00000039295)	CMYA5 (ENSMNEG00000037356) #31	MTX3 (ENSMNEG00000008284) #32	THBS4 (ENSMNEG00000027403) #34	SERINC5 (ENSMNEG00000030608) #36	ENSMNEG00000043833	ZFYVE16 (ENSMNEG00000040717) #37	ENSMNEG00000040805	FAM151B (ENSMNEG00000030974)	ENSMNEG00000013926	ANKRD34B (ENSMNEG00000006347)	ENSMNEG00000033103
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT01050000246082	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.c.e.a
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT01050000246082	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.c.e.a
Sooty mangabey	MODERN SPECIES	296	F2R (ENSCATG00000004708)	F2RL1 (ENSCATG00000032504)	CRHBP (ENSCATG00000033058)	AGGF1 (ENSCATG00000041518) #7	ENSCATG00000030461	PDE8B (ENSCATG00000037786) #9	WDR41 (ENSCATG00000041825) #10	OTP (ENSCATG00000032638) #11	ENSCATG00000034024 #14	ENSCATG00000017219	AP3B1 (ENSCATG00000038017) #17	SCAMP1 (ENSCATG00000044496) #18	LHFPL2 (ENSCATG00000035958) #19	ARSB (ENSCATG00000016836)	DMGDH (ENSCATG00000043134) #21	BHMT2 (ENSCATG00000041810) #22	BHMT (ENSCATG00000018459) #23	ENSCATG00000017079	JMY (ENSCATG00000031558) #27	HOMER1 (ENSCATG00000041074) #29	TENT2 (ENSCATG00000038522)	CMYA5 (ENSCATG00000030915) #31	MTX3 (ENSCATG00000043566) #32	THBS4 (ENSCATG00000032042) #34	SERINC5 (ENSCATG00000043970) #36	ENSCATG00000030668	ENSCATG00000044681	FAM151B (ENSCATG00000040732)	ENSCATG00000015204	ANKRD34B (ENSCATG00000015570)	ENSCATG00000042395
Drill	MODERN SPECIES	1083												SCAMP1 (ENSMLEG00000035674) #18	LHFPL2 (ENSMLEG00000006092) #19	ARSB (ENSMLEG00000039119)	DMGDH (ENSMLEG00000031952) #21	BHMT2 (ENSMLEG00000037432) #22	BHMT (ENSMLEG00000029882) #23	JMY (ENSMLEG00000028808) #27	ENSMLEG00000010309	ENSMLEG00000033033	HOMER1 (ENSMLEG00000031491) #29	TENT2 (ENSMLEG00000015829)	CMYA5 (ENSMLEG00000029723) #31	MTX3 (ENSMLEG00000032301) #32	THBS4 (ENSMLEG00000041362) #34	SERINC5 (ENSMLEG00000029957) #36
Tarsier	MODERN SPECIES	6244															DMGDH (ENSTSYG00000011138) #21	BHMT2 (ENSTSYG00000004821) #22	ENSTSYG00000030154	ENSTSYG00000027704
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.f #14	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.u	ENSGT00550000074949	ENSGT00940000155679
Mouse lemur	MODERN SPECIES	3	MEGF10 (ENSMICG00000046751)	PRRC1 (ENSMICG00000009016)	CCDC192 (ENSMICG00000043066)	SLC12A2 (ENSMICG00000013234)	FBN2 (ENSMICG00000001587)	SLC27A6 (ENSMICG00000047567)	ISOC1 (ENSMICG00000003279)	ADAMTS19 (ENSMICG00000009660)	MINAR2 (ENSMICG00000027569)	CHSY3 (ENSMICG00000030934)	AP3B1 (ENSMICG00000011403) #17	SCAMP1 (ENSMICG00000011421) #18	LHFPL2 (ENSMICG00000002076) #19	ARSB (ENSMICG00000044223)	DMGDH (ENSMICG00000005462) #21	BHMT2 (ENSMICG00000005482) #22	BHMT (ENSMICG00000005487) #23	JMY (ENSMICG00000032384) #27	HOMER1 (ENSMICG00000012592) #29	TENT2 (ENSMICG00000038412)	CMYA5 (ENSMICG00000017061) #31	MTX3 (ENSMICG00000017066) #32	THBS4 (ENSMICG00000017069) #34	SERINC5 (ENSMICG00000017075) #36	ENSMICG00000016986	ZFYVE16 (ENSMICG00000002405) #37	FAM151B (ENSMICG00000002412)	ENSMICG00000027047	MSH3 (ENSMICG00000016187)	ENSMICG00000036427	RASGRF2 (ENSMICG00000016229)
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.u	ENSGT00550000074949	ENSGT00940000155679
Coquerels sifaka	MODERN SPECIES	999	IQGAP2 (ENSPCOG00000026521)	F2RL1 (ENSPCOG00000015685)	S100Z (ENSPCOG00000005734)	CRHBP (ENSPCOG00000026267)	AGGF1 (ENSPCOG00000026723) #7	PDE8B (ENSPCOG00000017117) #9	WDR41 (ENSPCOG00000019741) #10	OTP (ENSPCOG00000028773) #11	TBCA (ENSPCOG00000005770) #14	ENSPCOG00000012906	ENSPCOG00000004066 #17	SCAMP1 (ENSPCOG00000022266) #18	LHFPL2 (ENSPCOG00000006098) #19	ARSB (ENSPCOG00000024261)	DMGDH (ENSPCOG00000014759) #21	BHMT2 (ENSPCOG00000027821) #22	BHMT (ENSPCOG00000000488) #23	JMY (ENSPCOG00000019253) #27	HOMER1 (ENSPCOG00000026991) #29	TENT2 (ENSPCOG00000000920)	CMYA5 (ENSPCOG00000025300) #31	MTX3 (ENSPCOG00000024492) #32	THBS4 (ENSPCOG00000026127) #34	ENSPCOG00000004503	SERINC5 (ENSPCOG00000020769) #36	ZFYVE16 (ENSPCOG00000023188) #37	FAM151B (ENSPCOG00000024049)	ENSPCOG00000024489	ENSPCOG00000020321	MSH3 (ENSPCOG00000020396)	RASGRF2 (ENSPCOG00000014453)
Greater bamboo lemur	MODERN SPECIES	488			F2RL1 (ENSPSMG00000021725)	S100Z (ENSPSMG00000021731)	CRHBP (ENSPSMG00000021746)	AGGF1 (ENSPSMG00000021774) #7	PDE8B (ENSPSMG00000022043) #9	WDR41 (ENSPSMG00000022198) #10	OTP (ENSPSMG00000022216) #11	TBCA (ENSPSMG00000022229) #14	AP3B1 (ENSPSMG00000022301) #17	SCAMP1 (ENSPSMG00000022346) #18	LHFPL2 (ENSPSMG00000022352) #19	ARSB (ENSPSMG00000022382)	DMGDH (ENSPSMG00000022423) #21	BHMT2 (ENSPSMG00000022458) #22	BHMT (ENSPSMG00000022496) #23	ENSPSMG00000022516	JMY (ENSPSMG00000022524) #27	HOMER1 (ENSPSMG00000022599) #29	TENT2 (ENSPSMG00000022674)	CMYA5 (ENSPSMG00000022711) #31	MTX3 (ENSPSMG00000022719) #32	THBS4 (ENSPSMG00000022760) #34	SERINC5 (ENSPSMG00000022792) #36	SPZ1 (ENSPSMG00000022808)	ZFYVE16 (ENSPSMG00000022828) #37	FAM151B (ENSPSMG00000022843)	ANKRD34B (ENSPSMG00000022855)	ENSPSMG00000022882	MSH3 (ENSPSMG00000022936)
Bushbaby	MODERN SPECIES	132	F2RL1 (ENSOGAG00000001151)	S100Z (ENSOGAG00000027239)	CRHBP (ENSOGAG00000003437)	AGGF1 (ENSOGAG00000003439) #7	ZBED3 (ENSOGAG00000033172) #8	PDE8B (ENSOGAG00000006930) #9	WDR41 (ENSOGAG00000006937) #10	OTP (ENSOGAG00000010197) #11	TBCA (ENSOGAG00000010198) #14	ENSOGAG00000026363	AP3B1 (ENSOGAG00000002145) #17	SCAMP1 (ENSOGAG00000014059) #18	LHFPL2 (ENSOGAG00000024907) #19	ARSB (ENSOGAG00000008620)	DMGDH (ENSOGAG00000008622) #21	BHMT2 (ENSOGAG00000008629) #22	BHMT (ENSOGAG00000006820) #23	JMY (ENSOGAG00000002137) #27	HOMER1 (ENSOGAG00000012453) #29	TENT2 (ENSOGAG00000012456)	CMYA5 (ENSOGAG00000012460) #31	MTX3 (ENSOGAG00000012479) #32	THBS4 (ENSOGAG00000015172) #34	ENSOGAG00000015178 #36	ENSOGAG00000028918	ENSOGAG00000005004	FAM151B (ENSOGAG00000005006)	ANKRD34B (ENSOGAG00000003348)	ENSOGAG00000025320	MSH3 (ENSOGAG00000011410)	RASGRF2 (ENSOGAG00000002537)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Glires	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.c.b #22
Pika	MODERN SPECIES	1180														ENSOPRG00000001578 #21	BHMT (ENSOPRG00000001607) #23	ENSOPRG00000001621 #22
Rodentia	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Myomorpha	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Muroidea	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Cricetidae	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Prairie vole	MODERN SPECIES	6	ENSMOCG00000001987	Aggf1 (ENSMOCG00000003377) #7	Zbed3 (ENSMOCG00000011692) #8	Pde8b (ENSMOCG00000012277) #9	Wdr41 (ENSMOCG00000006320) #10	ENSMOCG00000006214	Otp (ENSMOCG00000019228) #11	Tbca (ENSMOCG00000005814) #14	ENSMOCG00000006493	ENSMOCG00000005321	Ap3b1 (ENSMOCG00000017264) #17	Scamp1 (ENSMOCG00000001373) #18	Lhfpl2 (ENSMOCG00000001998) #19	Arsb (ENSMOCG00000000278)	Dmgdh (ENSMOCG00000004222) #21	Bhmt2 (ENSMOCG00000018570) #22	ENSMOCG00000012797 #23	Jmy (ENSMOCG00000000972) #27	Homer1 (ENSMOCG00000003233) #29	Tent2 (ENSMOCG00000013416)	Cmya5 (ENSMOCG00000020302) #31	Mtx3 (ENSMOCG00000017246) #32	Thbs4 (ENSMOCG00000017937) #34	Serinc5 (ENSMOCG00000017376) #36	Zfyve16 (ENSMOCG00000016512)	Fam151b (ENSMOCG00000012595)	Ankrd34b (ENSMOCG00000013232)	Dhfr (ENSMOCG00000014691)	Msh3 (ENSMOCG00000018492)	Rasgrf2 (ENSMOCG00000015751)	Ckmt2 (ENSMOCG00000003563)
Northern American deer mouse	MODERN SPECIES	6	F2rl2 (ENSPEMG00000019142)	Iqgap2 (ENSPEMG00000013395)	F2r (ENSPEMG00000025363)	F2rl1 (ENSPEMG00000029040)	S100z (ENSPEMG00000013966)	Crhbp (ENSPEMG00000009836)	Aggf1 (ENSPEMG00000015659) #7	Pde8b (ENSPEMG00000020359) #9	ENSPEMG00000023412 #10	Tbca (ENSPEMG00000015419) #14	Ap3b1 (ENSPEMG00000021014) #17	Scamp1 (ENSPEMG00000029280) #18	Lhfpl2 (ENSPEMG00000029932) #19	Arsb (ENSPEMG00000020554)	Dmgdh (ENSPEMG00000021307) #21	Bhmt2 (ENSPEMG00000021198) #22	ENSPEMG00000020841 #23	ENSPEMG00000030474	ENSPEMG00000026488	Jmy (ENSPEMG00000021018) #27	Homer1 (ENSPEMG00000016563) #29	Tent2 (ENSPEMG00000022209)	Cmya5 (ENSPEMG00000020808) #31	ENSPEMG00000028963	Mtx3 (ENSPEMG00000020867) #32	Thbs4 (ENSPEMG00000021194) #34	Serinc5 (ENSPEMG00000020960) #36	Spz1 (ENSPEMG00000007489)	Zfyve16 (ENSPEMG00000020714)	ENSPEMG00000024785	Ankrd34b (ENSPEMG00000016771)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Chinese hamster chok1gshd	MODERN SPECIES	1	F2rl1 (ENSCGRG00001012796)	S100z (ENSCGRG00001009971)	Crhbp (ENSCGRG00001008314)	Aggf1 (ENSCGRG00001017039) #7	Zbed3 (ENSCGRG00001010271) #8	Pde8b (ENSCGRG00001015606) #9	Wdr41 (ENSCGRG00001008129) #10	ENSCGRG00001008932	Otp (ENSCGRG00001022392) #11	Tbca (ENSCGRG00001021971) #14	Ap3b1 (ENSCGRG00001009397) #17	Scamp1 (ENSCGRG00001004428) #18	Lhfpl2 (ENSCGRG00001003627) #19	Arsb (ENSCGRG00001015736)	Dmgdh (ENSCGRG00001014647) #21	Bhmt2 (ENSCGRG00001007704) #22	ENSCGRG00001019116 #23	Jmy (ENSCGRG00001018071) #27	Homer1 (ENSCGRG00001013582) #29	Tent2 (ENSCGRG00001009951)	Cmya5 (ENSCGRG00001003968) #31	ENSCGRG00001008349	Mtx3 (ENSCGRG00001011412) #32	Thbs4 (ENSCGRG00001016664) #34	Serinc5 (ENSCGRG00001018453) #36	Spz1 (ENSCGRG00001008238)	Zfyve16 (ENSCGRG00001010507)	Fam151b (ENSCGRG00001014403)	Ankrd34b (ENSCGRG00001007953)	DHFR (ENSCGRG00001012555)	Msh3 (ENSCGRG00001012207)
Golden Hamster	MODERN SPECIES	620	F2rl2 (ENSMAUG00000015710)	F2r (ENSMAUG00000010556)	F2rl1 (ENSMAUG00000012126)	S100z (ENSMAUG00000001531)	Crhbp (ENSMAUG00000010702)	Aggf1 (ENSMAUG00000012678) #7	Pde8b (ENSMAUG00000015472) #9	Wdr41 (ENSMAUG00000004461) #10	Otp (ENSMAUG00000007760) #11	Tbca (ENSMAUG00000018233) #14	Ap3b1 (ENSMAUG00000001490) #17	Scamp1 (ENSMAUG00000018961) #18	Lhfpl2 (ENSMAUG00000020241) #19	Arsb (ENSMAUG00000005115)	Dmgdh (ENSMAUG00000011337) #21	Bhmt2 (ENSMAUG00000008057) #22	ENSMAUG00000004226 #23	Jmy (ENSMAUG00000015175) #27	Homer1 (ENSMAUG00000011151) #29	Tent2 (ENSMAUG00000012442)	Mtx3 (ENSMAUG00000022165) #32	Thbs4 (ENSMAUG00000009316) #34	Serinc5 (ENSMAUG00000009651) #36	Zfyve16 (ENSMAUG00000001716)	Fam151b (ENSMAUG00000022170)	Ankrd34b (ENSMAUG00000015327)	ENSMAUG00000020170	Msh3 (ENSMAUG00000021619)	Rasgrf2 (ENSMAUG00000016036)	Ckmt2 (ENSMAUG00000008773)	Zcchc9 (ENSMAUG00000022026)
Murinae	ANCESTRAL SPECIES	24	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Mus	ANCESTRAL SPECIES	22	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Mus_A	ANCESTRAL SPECIES	14	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Ryukyu mouse	MODERN SPECIES	4	Crhbp (MGP_CAROLIEiJ_G0018796)	Aggf1 (MGP_CAROLIEiJ_G0018795) #7	Zbed3 (MGP_CAROLIEiJ_G0018794) #8	Pde8b (MGP_CAROLIEiJ_G0018793) #9	MGP_CAROLIEiJ_G0018792 #10	Otp (MGP_CAROLIEiJ_G0018791) #11	Tbca (MGP_CAROLIEiJ_G0018790) #14	Ap3b1 (MGP_CAROLIEiJ_G0018789) #17	MGP_CAROLIEiJ_G0018788	Scamp1 (MGP_CAROLIEiJ_G0018787) #18	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #19	MGP_CAROLIEiJ_G0018785	Arsb (MGP_CAROLIEiJ_G0018784)	MGP_CAROLIEiJ_G0018783	Dmgdh (MGP_CAROLIEiJ_G0018782) #21	Bhmt2 (MGP_CAROLIEiJ_G0018781) #22	MGP_CAROLIEiJ_G0018780 #23	Jmy (MGP_CAROLIEiJ_G0018779) #27	Homer1 (MGP_CAROLIEiJ_G0018778) #29	Tent2 (MGP_CAROLIEiJ_G0018777)	MGP_CAROLIEiJ_G0018776 #31	Mtx3 (MGP_CAROLIEiJ_G0018775) #32	Thbs4 (MGP_CAROLIEiJ_G0018774) #34	Serinc5 (MGP_CAROLIEiJ_G0018773) #36	Spz1 (MGP_CAROLIEiJ_G0018772)	Zfyve16 (MGP_CAROLIEiJ_G0018771)	Fam151b (MGP_CAROLIEiJ_G0018770)	Ankrd34b (MGP_CAROLIEiJ_G0018769)	Dhfr (MGP_CAROLIEiJ_G0018768)	Msh3 (MGP_CAROLIEiJ_G0018767)	Rasgrf2 (MGP_CAROLIEiJ_G0018766)
Mus_B	ANCESTRAL SPECIES	13	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Mouse	MODERN SPECIES	4	F2r (ENSMUSG00000048376)	F2rl1 (ENSMUSG00000021678)	S100z (ENSMUSG00000021679)	Crhbp (ENSMUSG00000021680)	Aggf1 (ENSMUSG00000021681) #7	Zbed3 (ENSMUSG00000041995) #8	Pde8b (ENSMUSG00000021684) #9	Wdr41 (ENSMUSG00000042015) #10	Otp (ENSMUSG00000021685) #11	Tbca (ENSMUSG00000042043) #14	Ap3b1 (ENSMUSG00000021686) #17	Scamp1 (ENSMUSG00000021687) #18	Lhfpl2 (ENSMUSG00000045312) #19	Arsb (ENSMUSG00000042082)	Dmgdh (ENSMUSG00000042102) #21	Bhmt2 (ENSMUSG00000042118) #22	Bhmt (ENSMUSG00000074768) #23	Jmy (ENSMUSG00000021690) #27	Homer1 (ENSMUSG00000007617) #29	Tent2 (ENSMUSG00000042167)	Cmya5 (ENSMUSG00000047419) #31	Mtx3 (ENSMUSG00000021704) #32	Thbs4 (ENSMUSG00000021702) #34	Serinc5 (ENSMUSG00000021703) #36	Spz1 (ENSMUSG00000046957)	Zfyve16 (ENSMUSG00000021706)	Fam151b (ENSMUSG00000034334)	Ankrd34b (ENSMUSG00000045034)	Dhfr (ENSMUSG00000021707)	Gm20379 (ENSMUSG00000100622)	Msh3 (ENSMUSG00000014850)
Mus_C	ANCESTRAL SPECIES	10	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
spretus	MODERN SPECIES	4	F2rl1 (MGP_SPRETEiJ_G0019681)	S100z (MGP_SPRETEiJ_G0019680)	Crhbp (MGP_SPRETEiJ_G0019679)	Aggf1 (MGP_SPRETEiJ_G0019678) #7	Zbed3 (MGP_SPRETEiJ_G0019677) #8	Pde8b (MGP_SPRETEiJ_G0019676) #9	MGP_SPRETEiJ_G0019675 #10	Otp (MGP_SPRETEiJ_G0019674) #11	Tbca (MGP_SPRETEiJ_G0019673) #14	Ap3b1 (MGP_SPRETEiJ_G0019672) #17	MGP_SPRETEiJ_G0019671	Scamp1 (MGP_SPRETEiJ_G0019670) #18	Lhfpl2 (MGP_SPRETEiJ_G0019669) #19	Arsb (MGP_SPRETEiJ_G0019668)	Dmgdh (MGP_SPRETEiJ_G0019667) #21	Bhmt2 (MGP_SPRETEiJ_G0019666) #22	MGP_SPRETEiJ_G0019665 #23	Jmy (MGP_SPRETEiJ_G0019664) #27	Homer1 (MGP_SPRETEiJ_G0019663) #29	Tent2 (MGP_SPRETEiJ_G0019662)	Cmya5 (MGP_SPRETEiJ_G0019661) #31	Mtx3 (MGP_SPRETEiJ_G0019660) #32	Thbs4 (MGP_SPRETEiJ_G0019659) #34	Serinc5 (MGP_SPRETEiJ_G0019658) #36	Spz1 (MGP_SPRETEiJ_G0019657)	Zfyve16 (MGP_SPRETEiJ_G0019656)	Fam151b (MGP_SPRETEiJ_G0019655)	Ankrd34b (MGP_SPRETEiJ_G0019654)	Dhfr (MGP_SPRETEiJ_G0019653)	MGP_SPRETEiJ_G0019652	Msh3 (MGP_SPRETEiJ_G0019651)
Steppe mouse	MODERN SPECIES	3412	F2r (ENSMSIG00000011072)	F2rl1 (ENSMSIG00000011086)	S100z (ENSMSIG00000011096)	Crhbp (ENSMSIG00000011120)	Aggf1 (ENSMSIG00000011146) #7	ENSMSIG00000011178 #8	Pde8b (ENSMSIG00000011209) #9	ENSMSIG00000011421 #10	Otp (ENSMSIG00000011481) #11	ENSMSIG00000011491 #14	Ap3b1 (ENSMSIG00000011521) #17	Scamp1 (ENSMSIG00000011596) #18	Lhfpl2 (ENSMSIG00000011618) #19	Arsb (ENSMSIG00000011652)	Dmgdh (ENSMSIG00000011670) #21	Bhmt2 (ENSMSIG00000011736) #22	ENSMSIG00000011793	Jmy (ENSMSIG00000011806) #27	ENSMSIG00000011824	ENSMSIG00000011858	ENSMSIG00000011865	Homer1 (ENSMSIG00000011873) #29	Tent2 (ENSMSIG00000012117)	Cmya5 (ENSMSIG00000012218) #31	Mtx3 (ENSMSIG00000012405) #32	Thbs4 (ENSMSIG00000012423) #34	Serinc5 (ENSMSIG00000012451) #36	Spz1 (ENSMSIG00000012499)	Zfyve16 (ENSMSIG00000012506)	ENSMSIG00000012548	Ankrd34b (ENSMSIG00000012559)
Rat	MODERN SPECIES	11	Aggf1 (ENSRNOG00000029304) #7	ENSRNOG00000063007	Zbed3 (ENSRNOG00000028941) #8	LOC100912266 (ENSRNOG00000059441)	ENSRNOG00000067662	Pde8b (ENSRNOG00000010280) #9	Wdr41 (ENSRNOG00000025462) #10	Otp (ENSRNOG00000010560) #11	Tbca (ENSRNOG00000048342) #14	ENSRNOG00000068970	Ap3b1 (ENSRNOG00000010624) #17	Scamp1 (ENSRNOG00000061582) #18	Lhfpl2 (ENSRNOG00000011032) #19	Arsb (ENSRNOG00000011150)	Dmgdh (ENSRNOG00000023588) #21	Bhmt2 (ENSRNOG00000040120) #22	LOC103691423 (ENSRNOG00000029988)	AABR07007675.2 (ENSRNOG00000058886)	Bhmt (ENSRNOG00000011200) #23	Jmy (ENSRNOG00000050343) #27	Homer1 (ENSRNOG00000047014) #29	Tent2 (ENSRNOG00000012099)	Cmya5 (ENSRNOG00000023803) #31	Mtx3 (ENSRNOG00000023837) #32	Thbs4 (ENSRNOG00000012471) #34	Serinc5 (ENSRNOG00000024039) #36	Spz1 (ENSRNOG00000013050)	Zfyve16 (ENSRNOG00000013055)	Fam151b (ENSRNOG00000024136)	Ankrd34b (ENSRNOG00000040166)	Dhfr (ENSRNOG00000013521)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1658												Scamp1 (ENSNGAG00000014989) #18	Lhfpl2 (ENSNGAG00000000969) #19	Arsb (ENSNGAG00000000124)	Dmgdh (ENSNGAG00000016798) #21	Bhmt2 (ENSNGAG00000013853) #22	ENSNGAG00000020657 #23	Jmy (ENSNGAG00000019761) #27	Homer1 (ENSNGAG00000010741) #29	Tent2 (ENSNGAG00000014869)	Cmya5 (ENSNGAG00000019733) #31	Mtx3 (ENSNGAG00000017121) #32	Thbs4 (ENSNGAG00000003456) #34	Serinc5 (ENSNGAG00000000574) #36	Zfyve16 (ENSNGAG00000019708)	Fam151b (ENSNGAG00000005930)	Ankrd34b (ENSNGAG00000000386)	ENSNGAG00000019496	Dhfr (ENSNGAG00000018704)	Msh3 (ENSNGAG00000014298)	Rasgrf2 (ENSNGAG00000008843)
Lesser Egyptian jerboa	MODERN SPECIES	45					Aggf1 (ENSJJAG00000012003) #7	Zbed3 (ENSJJAG00000018785) #8	Pde8b (ENSJJAG00000023506) #9	ENSJJAG00000014477 #10	Otp (ENSJJAG00000018309) #11	ENSJJAG00000010595 #14	Ap3b1 (ENSJJAG00000017048) #17	Scamp1 (ENSJJAG00000015531) #18	Lhfpl2 (ENSJJAG00000016377) #19	Arsb (ENSJJAG00000011676)	Dmgdh (ENSJJAG00000011285) #21	Bhmt2 (ENSJJAG00000011883) #22	ENSJJAG00000022436 #23	Jmy (ENSJJAG00000015924) #27	Homer1 (ENSJJAG00000014750) #29	ENSJJAG00000012875	Tent2 (ENSJJAG00000015469)	Cmya5 (ENSJJAG00000020442) #31	Mtx3 (ENSJJAG00000022368) #32	Thbs4 (ENSJJAG00000014572) #34	Serinc5 (ENSJJAG00000011189) #36	Zfyve16 (ENSJJAG00000019491)	Fam151b (ENSJJAG00000012833)	Ankrd34b (ENSJJAG00000000619)	ENSJJAG00000011657	Msh3 (ENSJJAG00000021941)	Rasgrf2 (ENSJJAG00000016070)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Hystricomorpha_a	ANCESTRAL SPECIES	72	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Hystricomorpha_b	ANCESTRAL SPECIES	95	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Long-tailed chinchilla	MODERN SPECIES	132	F2RL1 (ENSCLAG00000010304)	S100Z (ENSCLAG00000010354)	CRHBP (ENSCLAG00000009942)	AGGF1 (ENSCLAG00000012928) #7	PDE8B (ENSCLAG00000011619) #9	WDR41 (ENSCLAG00000010095) #10	OTP (ENSCLAG00000011647) #11	TBCA (ENSCLAG00000011463) #14	AP3B1 (ENSCLAG00000017374) #17	ENSCLAG00000017966	SCAMP1 (ENSCLAG00000010430) #18	LHFPL2 (ENSCLAG00000010028) #19	ENSCLAG00000009820	ARSB (ENSCLAG00000013316)	DMGDH (ENSCLAG00000014854) #21	BHMT2 (ENSCLAG00000013633) #22	BHMT (ENSCLAG00000010253) #23	JMY (ENSCLAG00000009333) #27	HOMER1 (ENSCLAG00000010571) #29	TENT2 (ENSCLAG00000010023)	CMYA5 (ENSCLAG00000009334) #31	MTX3 (ENSCLAG00000011076) #32	THBS4 (ENSCLAG00000009452) #34	CCAR1 (ENSCLAG00000011807)	SLC25A16 (ENSCLAG00000015512)	DNA2 (ENSCLAG00000012086)	RUFY2 (ENSCLAG00000012405)	HNRNPH3 (ENSCLAG00000010680)	PBLD (ENSCLAG00000010284)	ENSCLAG00000014026	MYPN (ENSCLAG00000011004)
Degu	MODERN SPECIES	279			OTP (ENSODEG00000001674) #11	ENSODEG00000001698 #14	ENSODEG00000018710	ENSODEG00000018773	ENSODEG00000001711	AP3B1 (ENSODEG00000001757) #17	ENSODEG00000001855	ENSODEG00000001866	SCAMP1 (ENSODEG00000001895) #18	LHFPL2 (ENSODEG00000003251) #19	ENSODEG00000003273	ARSB (ENSODEG00000003302)	DMGDH (ENSODEG00000003394) #21	BHMT2 (ENSODEG00000003503) #22	BHMT (ENSODEG00000003547) #23	JMY (ENSODEG00000003622) #27	ENSODEG00000003653	HOMER1 (ENSODEG00000003750) #29	TENT2 (ENSODEG00000003946)	MTX3 (ENSODEG00000004002) #32	ENSODEG00000004025	THBS4 (ENSODEG00000004087) #34
Guinea pig	MODERN SPECIES	83						AGGF1 (ENSCPOG00000003545) #7	PDE8B (ENSCPOG00000001181) #9	WDR41 (ENSCPOG00000001183) #10	OTP (ENSCPOG00000009888) #11	TBCA (ENSCPOG00000035914) #14	AP3B1 (ENSCPOG00000000479) #17	SCAMP1 (ENSCPOG00000038700) #18	LHFPL2 (ENSCPOG00000035182) #19	ARSB (ENSCPOG00000040291)	DMGDH (ENSCPOG00000001913) #21	BHMT2 (ENSCPOG00000004265) #22	BHMT (ENSCPOG00000039971) #23	JMY (ENSCPOG00000008290) #27	HOMER1 (ENSCPOG00000007454) #29	TENT2 (ENSCPOG00000005462)	CMYA5 (ENSCPOG00000036038) #31	MTX3 (ENSCPOG00000024084) #32	THBS4 (ENSCPOG00000004926) #34	PARP4 (ENSCPOG00000014672)	ASPH (ENSCPOG00000007346)	CLVS1 (ENSCPOG00000007342)	CHD7 (ENSCPOG00000013385)	RAB2A (ENSCPOG00000035393)	CA8 (ENSCPOG00000025176)	TOX (ENSCPOG00000010812)	NSMAF (ENSCPOG00000013618)
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000038975	ENSHGLG00000002178 #9	ENSHGLG00000041303	ENSHGLG00000038347	ENSHGLG00000017808 #10	OTP (ENSHGLG00000003908) #11	ENSHGLG00000000425 #14	ENSHGLG00000019786	AP3B1 (ENSHGLG00000001480) #17	SCAMP1 (ENSHGLG00000048514) #18	ENSHGLG00000035099	ENSHGLG00000040355	ENSHGLG00000000380	ARSB (ENSHGLG00000000586)	DMGDH (ENSHGLG00000000837) #21	BHMT2 (ENSHGLG00000036952) #22	BHMT (ENSHGLG00000050585) #23	ENSHGLG00000045617	JMY (ENSHGLG00000002781) #27	HOMER1 (ENSHGLG00000001109) #29	TENT2 (ENSHGLG00000008742)	CMYA5 (ENSHGLG00000011995) #31	MTX3 (ENSHGLG00000034356) #32	ENSHGLG00000041734	ENSHGLG00000002153 #34	ENSHGLG00000019982	ENSHGLG00000045404	ENSHGLG00000025275	ENSHGLG00000034932	ENSHGLG00000034451	ENSHGLG00000045248
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00390000012762	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949.f	ENSGT00940000155679
Marmotini	ANCESTRAL SPECIES	23	ENSGT00390000012762	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949.f	ENSGT00940000155679
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT00390000012762	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00960000189962
Squirrel	MODERN SPECIES	149	ENSSTOG00000033438	ENSSTOG00000028701	ENSSTOG00000012288	ENSSTOG00000023234	AGGF1 (ENSSTOG00000021590) #7	ZBED3 (ENSSTOG00000003989) #8	PDE8B (ENSSTOG00000001468) #9	WDR41 (ENSSTOG00000028633) #10	OTP (ENSSTOG00000007544) #11	TBCA (ENSSTOG00000009840) #14	AP3B1 (ENSSTOG00000014099) #17	SCAMP1 (ENSSTOG00000023531) #18	LHFPL2 (ENSSTOG00000004457) #19	ARSB (ENSSTOG00000005818)	DMGDH (ENSSTOG00000005837) #21	BHMT2 (ENSSTOG00000005871) #22	BHMT (ENSSTOG00000005887) #23	JMY (ENSSTOG00000021490) #27	HOMER1 (ENSSTOG00000003164) #29	TENT2 (ENSSTOG00000027293)	MTX3 (ENSSTOG00000023002) #32	THBS4 (ENSSTOG00000009080) #34	SERINC5 (ENSSTOG00000009098) #36	ENSSTOG00000025704
Arctic ground squirrel	MODERN SPECIES	118	ENSUPAG00010014599	ENSUPAG00010014578	ENSUPAG00010014496	ENSUPAG00010014488	AGGF1 (ENSUPAG00010014439) #7	ZBED3 (ENSUPAG00010014432) #8	PDE8B (ENSUPAG00010013724) #9	WDR41 (ENSUPAG00010013668) #10	OTP (ENSUPAG00010013666) #11	TBCA (ENSUPAG00010013662) #14	AP3B1 (ENSUPAG00010013612) #17	SCAMP1 (ENSUPAG00010013586) #18	LHFPL2 (ENSUPAG00010013572) #19	ARSB (ENSUPAG00010013552)	DMGDH (ENSUPAG00010013523) #21	BHMT2 (ENSUPAG00010013504) #22	BHMT (ENSUPAG00010013490) #23	ENSUPAG00010013477	JMY (ENSUPAG00010013443) #27	HOMER1 (ENSUPAG00010013346) #29
Alpin marmot	MODERN SPECIES	48	MCCC2 (ENSMMMG00000002669)	BDP1 (ENSMMMG00000002729)	ENSMMMG00000003028	ENSMMMG00000003037	ENSMMMG00000003082	AGGF1 (ENSMMMG00000003093) #7	ZBED3 (ENSMMMG00000003120) #8	PDE8B (ENSMMMG00000003165) #9	WDR41 (ENSMMMG00000003481) #10	TBCA (ENSMMMG00000003516) #14	AP3B1 (ENSMMMG00000003600) #17	SCAMP1 (ENSMMMG00000006853) #18	LHFPL2 (ENSMMMG00000006878) #19	ARSB (ENSMMMG00000006892)	DMGDH (ENSMMMG00000006902) #21	BHMT2 (ENSMMMG00000006929) #22	BHMT (ENSMMMG00000006936) #23	JMY (ENSMMMG00000006956) #27	HOMER1 (ENSMMMG00000006979) #29	TENT2 (ENSMMMG00000007231)	CMYA5 (ENSMMMG00000007285) #31	MTX3 (ENSMMMG00000007317) #32	THBS4 (ENSMMMG00000007323) #34	SERINC5 (ENSMMMG00000007357) #36	ENSMMMG00000007362	ENSMMMG00000007367	FAM151B (ENSMMMG00000007697)	ANKRD34B (ENSMMMG00000007710)	ENSMMMG00000007718	MSH3 (ENSMMMG00000007726)	ENSMMMG00000007796
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005004790	NAIP (ENSSVLG00005004669)	AGGF1 (ENSSVLG00005004621) #7	ENSSVLG00005004600 #8	ENSSVLG00005004578 #8	ENSSVLG00005004554	PDE8B (ENSSVLG00005004357) #9	WDR41 (ENSSVLG00005014989) #10	OTP (ENSSVLG00005014921) #11	TBCA (ENSSVLG00005014739) #14	AP3B1 (ENSSVLG00005014385) #17	SCAMP1 (ENSSVLG00005014260) #18	LHFPL2 (ENSSVLG00005014202) #19	ARSB (ENSSVLG00005013953)	DMGDH (ENSSVLG00005013801) #21	BHMT2 (ENSSVLG00005013681) #22	ENSSVLG00005013529	BHMT (ENSSVLG00005013463) #23	JMY (ENSSVLG00005013142) #27	ENSSVLG00005013053	HOMER1 (ENSSVLG00005012639) #29	TENT2 (ENSSVLG00005012556)	CMYA5 (ENSSVLG00005012391) #31	MTX3 (ENSSVLG00005012299) #32	THBS4 (ENSSVLG00005011815) #34	SERINC5 (ENSSVLG00005011745) #36	ENSSVLG00005011728	ENSSVLG00005011673	FAM151B (ENSSVLG00005011621)	ENSSVLG00005011570	ANKRD34B (ENSSVLG00005011548)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Eulipotyphla	ANCESTRAL SPECIES	257														ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23
Common shrew	MODERN SPECIES	1026														ENSSARG00000010368	DMGDH (ENSSARG00000010376) #21	BHMT2 (ENSSARG00000010400) #22	BHMT (ENSSARG00000010410) #23
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Carnivora	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Caniformia	ANCESTRAL SPECIES	5	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Canidae	ANCESTRAL SPECIES	52	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.e.a.a	ENSGT00550000074949	ENSGT00940000155679
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000162210.m.b	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT00940000162350.b.b	ENSGT00940000162350.b.a	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.e.a.a.b
Dog	MODERN SPECIES	22	CRHBP (ENSCAFG00845010170)	AGGF1 (ENSCAFG00845010001) #7	ZBED3 (ENSCAFG00845009893) #8	PDE8B (ENSCAFG00845009245) #9	WDR41 (ENSCAFG00845008881) #10	OTP (ENSCAFG00845008819) #11	TBCA (ENSCAFG00845008735) #14	AP3B1 (ENSCAFG00845008344) #17	ENSCAFG00845008191	SCAMP1 (ENSCAFG00845008131) #18	ENSCAFG00845008040 #19	ENSCAFG00845007955	ENSCAFG00845007889	ARSB (ENSCAFG00845007767)	DMGDH (ENSCAFG00845007613) #21	BHMT2 (ENSCAFG00845007477) #22	BHMT (ENSCAFG00845007347) #23	JMY (ENSCAFG00845007064) #27	HOMER1 (ENSCAFG00845006728) #29	TENT2 (ENSCAFG00845006530)	CMYA5 (ENSCAFG00845006378) #31	MTX3 (ENSCAFG00845006230) #32	THBS4 (ENSCAFG00845006098) #34	ENSCAFG00845006060	SERINC5 (ENSCAFG00845006037) #36	SPZ1 (ENSCAFG00845006011)	ZFYVE16 (ENSCAFG00845005949) #37	FAM151B (ENSCAFG00845005890)	ANKRD34B (ENSCAFG00845005864)	ENSCAFG00845005830	MSH3 (ENSCAFG00845022317)
Dingo	MODERN SPECIES	138	CRHBP (ENSCAFG00020025980)	AGGF1 (ENSCAFG00020025988) #7	ENSCAFG00020025990 #8	PDE8B (ENSCAFG00020026022) #9	WDR41 (ENSCAFG00020026182) #10	OTP (ENSCAFG00020026185) #11	TBCA (ENSCAFG00020026187) #14	AP3B1 (ENSCAFG00020026199) #17	SCAMP1 (ENSCAFG00020026258) #18	LHFPL2 (ENSCAFG00020026266) #19	ENSCAFG00020026271	ENSCAFG00020026272	ENSCAFG00020026273	ARSB (ENSCAFG00020026275)	DMGDH (ENSCAFG00020026278) #21	BHMT2 (ENSCAFG00020026283) #22	BHMT (ENSCAFG00020026286) #23	JMY (ENSCAFG00020026290) #27	HOMER1 (ENSCAFG00020026292) #29	TENT2 (ENSCAFG00020026305)	CMYA5 (ENSCAFG00020026312) #31	MTX3 (ENSCAFG00020026315) #32	THBS4 (ENSCAFG00020026420) #34	ENSCAFG00020026808	ENSCAFG00020026810	SERINC5 (ENSCAFG00020026812) #36	SPZ1 (ENSCAFG00020026814)	ZFYVE16 (ENSCAFG00020026815) #37	ENSCAFG00020026816	FAM151B (ENSCAFG00020026818)	ANKRD34B (ENSCAFG00020026819)
Red fox	MODERN SPECIES	27	F2RL2 (ENSVVUG00000025145)	IQGAP2 (ENSVVUG00000025132)	F2R (ENSVVUG00000025128)	F2RL1 (ENSVVUG00000025124)	CRHBP (ENSVVUG00000025121)	AGGF1 (ENSVVUG00000025114) #7	PDE8B (ENSVVUG00000025106) #9	WDR41 (ENSVVUG00000025096) #10	OTP (ENSVVUG00000025094) #11	ENSVVUG00000025093	AP3B1 (ENSVVUG00000025056) #17	SCAMP1 (ENSVVUG00000025046) #18	LHFPL2 (ENSVVUG00000025039) #19	ENSVVUG00000025030	BHMT (ENSVVUG00000025022) #23	BHMT2 (ENSVVUG00000025018) #22	DMGDH (ENSVVUG00000025013) #21	JMY (ENSVVUG00000024988) #27	HOMER1 (ENSVVUG00000024979) #29	TENT2 (ENSVVUG00000024977)	CMYA5 (ENSVVUG00000024975) #31	ENSVVUG00000024973	MTX3 (ENSVVUG00000024969) #32	THBS4 (ENSVVUG00000024964) #34	SERINC5 (ENSVVUG00000024958) #36	SPZ1 (ENSVVUG00000024956)	ZFYVE16 (ENSVVUG00000024953) #37	FAM151B (ENSVVUG00000024951)	ANKRD34B (ENSVVUG00000024950)	ENSVVUG00000024949	DHFR (ENSVVUG00000024946)
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Ursidae	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.h.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Ursus	ANCESTRAL SPECIES	3	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.h.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.c	ENSGT00550000074949	ENSGT00940000155679
American black bear	MODERN SPECIES	429															DMGDH (ENSUAMG00000024639) #21	BHMT2 (ENSUAMG00000024640) #22	BHMT (ENSUAMG00000024641) #23	JMY (ENSUAMG00000024643) #27	HOMER1 (ENSUAMG00000024644) #29
Polar bear	MODERN SPECIES	447											ENSUMAG00000001815 #17	SCAMP1 (ENSUMAG00000001830) #18	LHFPL2 (ENSUMAG00000001920) #19	ARSB (ENSUMAG00000001958)	DMGDH (ENSUMAG00000001972) #21	BHMT2 (ENSUMAG00000001981) #22	BHMT (ENSUMAG00000001999) #23	JMY (ENSUMAG00000002008) #27	HOMER1 (ENSUMAG00000002034) #29	ENSUMAG00000002085 #29	TENT2 (ENSUMAG00000002121)	CMYA5 (ENSUMAG00000002136) #31	MTX3 (ENSUMAG00000002205) #32	THBS4 (ENSUMAG00000002341) #34	SERINC5 (ENSUMAG00000002880) #36	SPZ1 (ENSUMAG00000002883)	ZFYVE16 (ENSUMAG00000002887) #37	FAM151B (ENSUMAG00000002893)	ENSUMAG00000002915	MSH3 (ENSUMAG00000002941)	RASGRF2 (ENSUMAG00000003013)
Giant Panda	MODERN SPECIES	13	F2RL2 (ENSAMEG00000001805)	F2R (ENSAMEG00000018602)	F2RL1 (ENSAMEG00000001809)	CRHBP (ENSAMEG00000001817)	AGGF1 (ENSAMEG00000001833) #7	PDE8B (ENSAMEG00000005971) #9	ENSAMEG00000028764	WDR41 (ENSAMEG00000005933) #10	OTP (ENSAMEG00000028076) #11	TBCA (ENSAMEG00000027837) #14	AP3B1 (ENSAMEG00000005816) #17	SCAMP1 (ENSAMEG00000005799) #18	LHFPL2 (ENSAMEG00000005794) #19	ARSB (ENSAMEG00000005783)	DMGDH (ENSAMEG00000005739) #21	BHMT2 (ENSAMEG00000005719) #22	BHMT (ENSAMEG00000005696) #23	JMY (ENSAMEG00000015594) #27	HOMER1 (ENSAMEG00000015607) #29	TENT2 (ENSAMEG00000015619)	CMYA5 (ENSAMEG00000015633) #31	MTX3 (ENSAMEG00000015643) #32	THBS4 (ENSAMEG00000015652) #34	SERINC5 (ENSAMEG00000015721) #36	SPZ1 (ENSAMEG00000019078)	ZFYVE16 (ENSAMEG00000015737) #37	FAM151B (ENSAMEG00000015740)	ANKRD34B (ENSAMEG00000019111)	ENSAMEG00000015750	MSH3 (ENSAMEG00000015754)	RASGRF2 (ENSAMEG00000015782)
Felidae	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Panthera	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00940000161069.h	ENSGT00390000010283	ENSGT00550000074949
Panthera_a	ANCESTRAL SPECIES	3	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00390000009443.j	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00950000183010.a.a.a.b.b	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00940000161069.h	ENSGT00390000010283
leopard	MODERN SPECIES	40	S100Z (ENSPPRG00000002129)	CRHBP (ENSPPRG00000002387)	AGGF1 (ENSPPRG00000004438) #7	ZBED3 (ENSPPRG00000017742) #8	PDE8B (ENSPPRG00000012726) #9	WDR41 (ENSPPRG00000015058) #10	OTP (ENSPPRG00000015334) #11	TBCA (ENSPPRG00000018237) #14	AP3B1 (ENSPPRG00000019993) #17	ENSPPRG00000020501	SCAMP1 (ENSPPRG00000000330) #18	LHFPL2 (ENSPPRG00000000681) #19	ENSPPRG00000000967	ARSB (ENSPPRG00000002867)	DMGDH (ENSPPRG00000002973) #21	BHMT2 (ENSPPRG00000003496) #22	BHMT (ENSPPRG00000004028) #23	JMY (ENSPPRG00000004743) #27	HOMER1 (ENSPPRG00000006866) #29	TENT2 (ENSPPRG00000008396)	ENSPPRG00000018657	CMYA5 (ENSPPRG00000010137) #31	MTX3 (ENSPPRG00000010541) #32	ENSPPRG00000010693 #32	THBS4 (ENSPPRG00000011385) #34	SERINC5 (ENSPPRG00000012240) #36	SPZ1 (ENSPPRG00000019097)	ZFYVE16 (ENSPPRG00000012892) #37	FAM151B (ENSPPRG00000013219)	ANKRD34B (ENSPPRG00000019199)	ENSPPRG00000014559
lion	MODERN SPECIES		F2RL1 (ENSPLOG00000001714)	S100Z (ENSPLOG00000001701)	CRHBP (ENSPLOG00000001686)	AGGF1 (ENSPLOG00000001638) #7	ZBED3 (ENSPLOG00000001610) #8	PDE8B (ENSPLOG00000001335) #9	WDR41 (ENSPLOG00000001110) #10	OTP (ENSPLOG00000001071) #11	TBCA (ENSPLOG00000001046) #14	AP3B1 (ENSPLOG00000000902) #17	SCAMP1 (ENSPLOG00000000849) #18	LHFPL2 (ENSPLOG00000000832) #19	ENSPLOG00000000818	ARSB (ENSPLOG00000000803)	DMGDH (ENSPLOG00000000773) #21	BHMT2 (ENSPLOG00000000718) #22	BHMT (ENSPLOG00000000665) #23	JMY (ENSPLOG00000000614) #27	HOMER1 (ENSPLOG00000000572) #29	TENT2 (ENSPLOG00000000530)	ENSPLOG00000000504	CMYA5 (ENSPLOG00000000485) #31	MTX3 (ENSPLOG00000000460) #32	THBS4 (ENSPLOG00000000412) #34	SERINC5 (ENSPLOG00000000355) #36	SPZ1 (ENSPLOG00000000337)	ENSPLOG00000000257	ZFYVE16 (ENSPLOG00000000241) #37	FAM151B (ENSPLOG00000000229)	ANKRD34B (ENSPLOG00000000219)	ENSPLOG00000000207
Tiger	MODERN SPECIES	134	IQGAP2 (ENSPTIG00000021975)	F2R (ENSPTIG00000021894)	F2RL1 (ENSPTIG00000021859)	S100Z (ENSPTIG00000021832)	CRHBP (ENSPTIG00000021691)	AGGF1 (ENSPTIG00000021519) #7	PDE8B (ENSPTIG00000014747) #9	WDR41 (ENSPTIG00000011923) #10	OTP (ENSPTIG00000011169) #11	TBCA (ENSPTIG00000009506) #14	AP3B1 (ENSPTIG00000008485) #17	SCAMP1 (ENSPTIG00000007335) #18	LHFPL2 (ENSPTIG00000006957) #19	ARSB (ENSPTIG00000003156)	DMGDH (ENSPTIG00000021430) #21	BHMT2 (ENSPTIG00000020984) #22	BHMT (ENSPTIG00000020191) #23	JMY (ENSPTIG00000019858) #27	HOMER1 (ENSPTIG00000018119) #29	TENT2 (ENSPTIG00000015267)	CMYA5 (ENSPTIG00000014447) #31	ENSPTIG00000014075 #32	THBS4 (ENSPTIG00000012684) #34	SERINC5 (ENSPTIG00000011391) #36	SPZ1 (ENSPTIG00000004689)	ZFYVE16 (ENSPTIG00000010471) #37	FAM151B (ENSPTIG00000009413)	ANKRD34B (ENSPTIG00000004658)	ENSPTIG00000007949	ENSPTIG00000006963	MSH3 (ENSPTIG00000000043)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Chiroptera	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Greater horseshoe bat	MODERN SPECIES	25	CRHBP (ENSRFEG00010015859)	S100Z (ENSRFEG00010015950)	AGGF1 (ENSRFEG00010016035) #7	ZBED3 (ENSRFEG00010016086) #8	PDE8B (ENSRFEG00010016179) #9	WDR41 (ENSRFEG00010017690) #10	OTP (ENSRFEG00010017860) #11	TBCA (ENSRFEG00010017900) #14	AP3B1 (ENSRFEG00010018051) #17	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #18	LHFPL2 (ENSRFEG00010018294) #19	ARSB (ENSRFEG00010018336)	DMGDH (ENSRFEG00010018532) #21	BHMT2 (ENSRFEG00010018710) #22	BHMT (ENSRFEG00010018771) #23	JMY (ENSRFEG00010018821) #27	HOMER1 (ENSRFEG00010018881) #29	TENT2 (ENSRFEG00010019113)	CMYA5 (ENSRFEG00010019210) #31	MTX3 (ENSRFEG00010019245) #32	THBS4 (ENSRFEG00010019289) #34	SERINC5 (ENSRFEG00010019347) #36	SPZ1 (ENSRFEG00010019387)	ZFYVE16 (ENSRFEG00010019402) #37	FAM151B (ENSRFEG00010019442)	ANKRD34B (ENSRFEG00010019460)	ENSRFEG00010019476	MSH3 (ENSRFEG00010019541)	ENSRFEG00010019598
Microbat	MODERN SPECIES	937	F2RL2 (ENSMLUG00000006767)	IQGAP2 (ENSMLUG00000006695)	F2R (ENSMLUG00000029641)	ENSMLUG00000006790	CRHBP (ENSMLUG00000025557)	AGGF1 (ENSMLUG00000016792) #7	PDE8B (ENSMLUG00000016798) #9	WDR41 (ENSMLUG00000016814) #10	OTP (ENSMLUG00000028781) #11	TBCA (ENSMLUG00000001087) #14	AP3B1 (ENSMLUG00000006637) #17	SCAMP1 (ENSMLUG00000006679) #18	LHFPL2 (ENSMLUG00000006700) #19	ARSB (ENSMLUG00000001949)	DMGDH (ENSMLUG00000009128) #21	BHMT2 (ENSMLUG00000009152) #22	BHMT (ENSMLUG00000009164) #23	JMY (ENSMLUG00000000275) #27	HOMER1 (ENSMLUG00000010972) #29	TENT2 (ENSMLUG00000010990)	CMYA5 (ENSMLUG00000011014) #31	ENSMLUG00000026872	MTX3 (ENSMLUG00000013201) #32	THBS4 (ENSMLUG00000013206) #34	SERINC5 (ENSMLUG00000013220) #36	ENSMLUG00000029886	ENSMLUG00000014110	ENSMLUG00000002842	FAM151B (ENSMLUG00000002854)	ANKRD34B (ENSMLUG00000002857)	ENSMLUG00000012200
Megabat	MODERN SPECIES	578															DMGDH (ENSPVAG00000000621) #21	BHMT2 (ENSPVAG00000000622) #22	BHMT (ENSPVAG00000000624) #23	JMY (ENSPVAG00000000625) #27
Equus	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Donkey	MODERN SPECIES	29	F2RL1 (ENSEASG00005001812)	S100Z (ENSEASG00005001816)	CRHBP (ENSEASG00005001822)	AGGF1 (ENSEASG00005001829) #7	ZBED3 (ENSEASG00005034455) #8	PDE8B (ENSEASG00005001845) #9	WDR41 (ENSEASG00005001862) #10	OTP (ENSEASG00005001863) #11	ENSEASG00005032921	ENSEASG00005028729 #14	AP3B1 (ENSEASG00005001889) #17	SCAMP1 (ENSEASG00005001900) #18	LHFPL2 (ENSEASG00005001904) #19	ARSB (ENSEASG00005001910)	DMGDH (ENSEASG00005001920) #21	BHMT2 (ENSEASG00005001941) #22	BHMT (ENSEASG00005001952) #23	JMY (ENSEASG00005001982) #27	HOMER1 (ENSEASG00005001988) #29	TENT2 (ENSEASG00005001993)	CMYA5 (ENSEASG00005037295) #31	MTX3 (ENSEASG00005002019) #32	THBS4 (ENSEASG00005002059) #34	SERINC5 (ENSEASG00005002191) #36	ENSEASG00005002196	SPZ1 (ENSEASG00005002199)	ZFYVE16 (ENSEASG00005002242) #37	FAM151B (ENSEASG00005002548)	ANKRD34B (ENSEASG00005002555)	ENSEASG00005002559	MSH3 (ENSEASG00005002611)
Horse	MODERN SPECIES	5	F2RL2 (ENSECAG00000010531)	IQGAP2 (ENSECAG00000004274)	F2RL1 (ENSECAG00000002867)	S100Z (ENSECAG00000000977)	F2R (ENSECAG00000004055)	CRHBP (ENSECAG00000017949)	ZBED3 (ENSECAG00000040464) #8	PDE8B (ENSECAG00000012189) #9	WDR41 (ENSECAG00000009496) #10	OTP (ENSECAG00000009423) #11	TBCA (ENSECAG00000009383) #14	AP3B1 (ENSECAG00000022849) #17	SCAMP1 (ENSECAG00000021921) #18	LHFPL2 (ENSECAG00000021890) #19	ARSB (ENSECAG00000020847)	BHMT2 (ENSECAG00000018440) #22	DMGDH (ENSECAG00000019851) #21	BHMT (ENSECAG00000015626) #23	ENSECAG00000052194	JMY (ENSECAG00000014968) #27	ENSECAG00000039002 #29	HOMER1 (ENSECAG00000013350) #29	TENT2 (ENSECAG00000012698)	CMYA5 (ENSECAG00000034911) #31	MTX3 (ENSECAG00000008541) #32	THBS4 (ENSECAG00000019665) #34	SERINC5 (ENSECAG00000016315) #36	ENSECAG00000046435	SPZ1 (ENSECAG00000005453)	ZFYVE16 (ENSECAG00000013918) #37	ENSECAG00000056306
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Suina	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.f #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Chacoan peccary	MODERN SPECIES	204	F2R (ENSCWAG00000008004)	F2RL1 (ENSCWAG00000008039)	ENSCWAG00000008077	CRHBP (ENSCWAG00000008117)	AGGF1 (ENSCWAG00000008243) #7	ZBED3 (ENSCWAG00000008305) #8	PDE8B (ENSCWAG00000008441) #9	WDR41 (ENSCWAG00000010043) #10	OTP (ENSCWAG00000010193) #11	TBCA (ENSCWAG00000010250) #14	AP3B1 (ENSCWAG00000010356) #17	SCAMP1 (ENSCWAG00000010485) #18	LHFPL2 (ENSCWAG00000010566) #19	ARSB (ENSCWAG00000010599)	DMGDH (ENSCWAG00000010632) #21	BHMT2 (ENSCWAG00000010749) #22	BHMT (ENSCWAG00000010882) #23	JMY (ENSCWAG00000010992) #27	HOMER1 (ENSCWAG00000011069) #29	TENT2 (ENSCWAG00000011540)	CMYA5 (ENSCWAG00000011677) #31	MTX3 (ENSCWAG00000012419) #32	THBS4 (ENSCWAG00000012471) #34	SERINC5 (ENSCWAG00000012870) #36	SPZ1 (ENSCWAG00000013102)	ENSCWAG00000013133	FAM151B (ENSCWAG00000013202)	ANKRD34B (ENSCWAG00000013240)	ENSCWAG00000013255	MSH3 (ENSCWAG00000013447)	RASGRF2 (ENSCWAG00000017055)
Pig	MODERN SPECIES	10	CRHBP (ENSSSCG00000014093)	AGGF1 (ENSSSCG00000014094) #7	ENSSSCG00000050058	PDE8B (ENSSSCG00000014097) #9	ENSSSCG00000014096	ENSSSCG00000051837 #10	ENSSSCG00000014098 #10	OTP (ENSSSCG00000014099) #11	TBCA (ENSSSCG00000014100) #14	ENSSSCG00000034241	AP3B1 (ENSSSCG00000014101) #17	SCAMP1 (ENSSSCG00000034795) #18	LHFPL2 (ENSSSCG00000028536) #19	ARSB (ENSSSCG00000038535)	DMGDH (ENSSSCG00000014110) #21	BHMT2 (ENSSSCG00000054426) #22	ENSSSCG00000053764	BHMT (ENSSSCG00000014108) #23	JMY (ENSSSCG00000014112) #27	HOMER1 (ENSSSCG00000014113) #29	ENSSSCG00000043942	TENT2 (ENSSSCG00000014114)	CMYA5 (ENSSSCG00000026098) #31	MTX3 (ENSSSCG00000014116) #32	THBS4 (ENSSSCG00000014117) #34	SERINC5 (ENSSSCG00000014119) #36	SPZ1 (ENSSSCG00000014122)	ZFYVE16 (ENSSSCG00000014121) #37	FAM151B (ENSSSCG00000014123)	ANKRD34B (ENSSSCG00000014124)	ENSSSCG00000031117
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949
Cetacea	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679
Blue whale	MODERN SPECIES	14	F2RL1 (ENSBMSG00010005699)	S100Z (ENSBMSG00010005711)	CRHBP (ENSBMSG00010005714)	AGGF1 (ENSBMSG00010005734) #7	ZBED3 (ENSBMSG00010005760) #8	PDE8B (ENSBMSG00010005858) #9	WDR41 (ENSBMSG00010006297) #10	OTP (ENSBMSG00010006319) #11	ENSBMSG00010006335 #14	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #17	SCAMP1 (ENSBMSG00010006378) #18	LHFPL2 (ENSBMSG00010006395) #19	ARSB (ENSBMSG00010006407)	DMGDH (ENSBMSG00010006427) #21	BHMT2 (ENSBMSG00010006453) #22	BHMT (ENSBMSG00010006489) #23	JMY (ENSBMSG00010006531) #27	HOMER1 (ENSBMSG00010006587) #29	ENSBMSG00010006619	CMYA5 (ENSBMSG00010006643) #31	MTX3 (ENSBMSG00010006662) #32	THBS4 (ENSBMSG00010006679) #34	SERINC5 (ENSBMSG00010006731) #36	SPZ1 (ENSBMSG00010006746)	ENSBMSG00010006757	FAM151B (ENSBMSG00010006772)	ANKRD34B (ENSBMSG00010006782)	ENSBMSG00010006789	MSH3 (ENSBMSG00010006814)	RASGRF2 (ENSBMSG00010006843)
Odontoceti	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949
Sperm whale	MODERN SPECIES	18	TIGD4 (ENSPCTG00005002959)	ARFIP1 (ENSPCTG00005002925)	ENSPCTG00005002902	TMEM154 (ENSPCTG00005002881)	ENSPCTG00005002861	FBXW7 (ENSPCTG00005002824)	GATB (ENSPCTG00005002750)	FHIP1A (ENSPCTG00005002716)	PRSS48 (ENSPCTG00005002685)	SH3D19 (ENSPCTG00005002589)	ENSPCTG00005002537	ENSPCTG00005002525	MAB21L2 (ENSPCTG00005002519)	LRBA (ENSPCTG00005002441)	DCLK2 (ENSPCTG00005002361)	ENSPCTG00005002306 #22	NR3C2 (ENSPCTG00005002287)	ARHGAP10 (ENSPCTG00005002260)	PRMT9 (ENSPCTG00005002225)	TMEM184C (ENSPCTG00005002203)	EDNRA (ENSPCTG00005002154)	ENSPCTG00005002142	TTC29 (ENSPCTG00005002054)	POU4F2 (ENSPCTG00005002032)	SLC10A7 (ENSPCTG00005001951)	LSM6 (ENSPCTG00005001901)	ZNF827 (ENSPCTG00005001804)	MMAA (ENSPCTG00005001755)	SMAD1 (ENSPCTG00005001735)	OTUD4 (ENSPCTG00005001708)	ABCE1 (ENSPCTG00005001679)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949
Monodontidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949
Beluga whale	MODERN SPECIES	71	F2R (ENSDLEG00000008028)	F2RL1 (ENSDLEG00000008016)	S100Z (ENSDLEG00000008008)	CRHBP (ENSDLEG00000007986)	AGGF1 (ENSDLEG00000007958) #7	ZBED3 (ENSDLEG00000007936) #8	PDE8B (ENSDLEG00000015062) #9	WDR41 (ENSDLEG00000014960) #10	OTP (ENSDLEG00000014945) #11	TBCA (ENSDLEG00000014906) #14	AP3B1 (ENSDLEG00000014741) #17	SCAMP1 (ENSDLEG00000014708) #18	LHFPL2 (ENSDLEG00000014699) #19	ARSB (ENSDLEG00000014686)	DMGDH (ENSDLEG00000014641) #21	BHMT2 (ENSDLEG00000014617) #22	BHMT (ENSDLEG00000014599) #23	JMY (ENSDLEG00000014574) #27	HOMER1 (ENSDLEG00000014455) #29	ENSDLEG00000014436	PAPD4 (ENSDLEG00000014384)	CMYA5 (ENSDLEG00000014094) #31	MTX3 (ENSDLEG00000014026) #32	THBS4 (ENSDLEG00000013983) #34	SERINC5 (ENSDLEG00000013937) #36	SPZ1 (ENSDLEG00000013919)	ZFYVE16 (ENSDLEG00000013817) #37	FAM151B (ENSDLEG00000013793)	ANKRD34B (ENSDLEG00000013781)	DHFR (ENSDLEG00000013740)	MSH3 (ENSDLEG00000013710)
Narwhal	MODERN SPECIES	298	F2R (ENSMMNG00015007933)	F2RL1 (ENSMMNG00015007943)	S100Z (ENSMMNG00015007958)	CRHBP (ENSMMNG00015007977)	AGGF1 (ENSMMNG00015008009) #7	ZBED3 (ENSMMNG00015008041) #8	PDE8B (ENSMMNG00015008112) #9	WDR41 (ENSMMNG00015008176) #10	OTP (ENSMMNG00015008215) #11	TBCA (ENSMMNG00015008230) #14	AP3B1 (ENSMMNG00015008260) #17	SCAMP1 (ENSMMNG00015008303) #18	LHFPL2 (ENSMMNG00015008328) #19	ARSB (ENSMMNG00015008346)	DMGDH (ENSMMNG00015008374) #21	BHMT2 (ENSMMNG00015008393) #22	BHMT (ENSMMNG00015008415) #23	JMY (ENSMMNG00015008440) #27	HOMER1 (ENSMMNG00015008534) #29	TENT2 (ENSMMNG00015008599)	ENSMMNG00015008614	CMYA5 (ENSMMNG00015008628) #31	MTX3 (ENSMMNG00015008650) #32	THBS4 (ENSMMNG00015008670) #34	SERINC5 (ENSMMNG00015008702) #36	SPZ1 (ENSMMNG00015008717)	ZFYVE16 (ENSMMNG00015008743) #37	FAM151B (ENSMMNG00015008794)	ANKRD34B (ENSMMNG00015008806)	ENSMMNG00015008817	MSH3 (ENSMMNG00015008850)
Vaquita	MODERN SPECIES	14	F2R (ENSPSNG00000005065)	F2RL1 (ENSPSNG00000005843)	S100Z (ENSPSNG00000005821)	CRHBP (ENSPSNG00000005773)	AGGF1 (ENSPSNG00000005724) #7	ZBED3 (ENSPSNG00000005710) #8	PDE8B (ENSPSNG00000005114) #9	WDR41 (ENSPSNG00000004776) #10	OTP (ENSPSNG00000004725) #11	TBCA (ENSPSNG00000004666) #14	AP3B1 (ENSPSNG00000004553) #17	SCAMP1 (ENSPSNG00000004447) #18	LHFPL2 (ENSPSNG00000004403) #19	ARSB (ENSPSNG00000004356)	DMGDH (ENSPSNG00000004287) #21	BHMT2 (ENSPSNG00000004227) #22	BHMT (ENSPSNG00000004175) #23	JMY (ENSPSNG00000004120) #27	HOMER1 (ENSPSNG00000004084) #29	ENSPSNG00000004038	TENT2 (ENSPSNG00000004010)	CMYA5 (ENSPSNG00000003900) #31	MTX3 (ENSPSNG00000003883) #32	THBS4 (ENSPSNG00000003786) #34	SERINC5 (ENSPSNG00000003740) #36	SPZ1 (ENSPSNG00000003718)	ZFYVE16 (ENSPSNG00000003688) #37	FAM151B (ENSPSNG00000003651)	ANKRD34B (ENSPSNG00000003636)	ENSPSNG00000003617	MSH3 (ENSPSNG00000003545)
Dolphin	MODERN SPECIES	2963												SCAMP1 (ENSTTRG00000012953) #18	LHFPL2 (ENSTTRG00000012959) #19	ARSB (ENSTTRG00000012960)	DMGDH (ENSTTRG00000012962) #21	BHMT2 (ENSTTRG00000012963) #22	BHMT (ENSTTRG00000012964) #23	JMY (ENSTTRG00000012967) #27	HOMER1 (ENSTTRG00000012969) #29	PAPD4 (ENSTTRG00000012973)	ENSTTRG00000012976 #31	ENSTTRG00000012979 #32
Pecora	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Yarkand deer	MODERN SPECIES	3	ENSCHYG00000006952	ENSCHYG00000006962 #9	ENSCHYG00000007028 #9	WDR41 (ENSCHYG00000007090) #10	OTP (ENSCHYG00000007305) #11	TBCA (ENSCHYG00000007320) #14	ENSCHYG00000007338	ENSCHYG00000007344	ENSCHYG00000007356	AP3B1 (ENSCHYG00000007402) #17	SCAMP1 (ENSCHYG00000007687) #18	LHFPL2 (ENSCHYG00000007744) #19	ENSCHYG00000007782	DMGDH (ENSCHYG00000007878) #21	ENSCHYG00000008336	BHMT2 (ENSCHYG00000008358) #22	ENSCHYG00000008402	BHMT (ENSCHYG00000008466) #23	JMY (ENSCHYG00000008534) #27	HOMER1 (ENSCHYG00000008754) #29	ENSCHYG00000008919	CMYA5 (ENSCHYG00000009225) #31	ENSCHYG00000009493	MTX3 (ENSCHYG00000009541) #32	ENSCHYG00000009694	THBS4 (ENSCHYG00000009745) #34	SERINC5 (ENSCHYG00000010132) #36	ENSCHYG00000010280	GNPNAT1 (ENSCHYG00000010298)	STYX (ENSCHYG00000010360)	ENSCHYG00000010576
Percora_a	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Siberian musk deer	MODERN SPECIES	69	S100Z (ENSMMSG00000015687)	CRHBP (ENSMMSG00000015697)	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751) #7	ZBED3 (ENSMMSG00000015777) #8	PDE8B (ENSMMSG00000015917) #9	WDR41 (ENSMMSG00000017180) #10	OTP (ENSMMSG00000017274) #11	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #17	SCAMP1 (ENSMMSG00000017674) #18	LHFPL2 (ENSMMSG00000017736) #19	ARSB (ENSMMSG00000017759)	DMGDH (ENSMMSG00000017858) #21	BHMT2 (ENSMMSG00000017965) #22	BHMT (ENSMMSG00000018085) #23	JMY (ENSMMSG00000018183) #27
Bovidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Bovinae	ANCESTRAL SPECIES	33	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.j	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Bos	ANCESTRAL SPECIES	31	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Bos_a	ANCESTRAL SPECIES	26	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Wild yak	MODERN SPECIES	2423															DMGDH (ENSBMUG00000017674) #21	BHMT2 (ENSBMUG00000017646) #22	BHMT (ENSBMUG00000017574) #23	JMY (ENSBMUG00000017516) #27	HOMER1 (ENSBMUG00000017488) #29	TENT2 (ENSBMUG00000017424)	CMYA5 (ENSBMUG00000017368) #31
Domestic yak	MODERN SPECIES	2	S100Z (ENSBGRG00000007761)	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412) #7	ZBED3 (ENSBGRG00000007380) #8	PDE8B (ENSBGRG00000006555) #9	WDR41 (ENSBGRG00000006363) #10	OTP (ENSBGRG00000006298) #11	TBCA (ENSBGRG00000006236) #14	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #17	SCAMP1 (ENSBGRG00000005900) #18	LHFPL2 (ENSBGRG00000005875) #19	ENSBGRG00000005848	ARSB (ENSBGRG00000005773)	DMGDH (ENSBGRG00000005663) #21	ENSBGRG00000005598 #22	BHMT (ENSBGRG00000005578) #23	JMY (ENSBGRG00000005553) #27	HOMER1 (ENSBGRG00000005430) #29	TENT2 (ENSBGRG00000005235)	CMYA5 (ENSBGRG00000005128) #31	MTX3 (ENSBGRG00000005019) #32	THBS4 (ENSBGRG00000004748) #34	SERINC5 (ENSBGRG00000004575) #36	GNPNAT1 (ENSBGRG00000004543)	STYX (ENSBGRG00000004422)	ENSBGRG00000004401	PSMC6 (ENSBGRG00000004257)	ERO1A (ENSBGRG00000004190)	GPR137C (ENSBGRG00000004169)	TXNDC16 (ENSBGRG00000004037)
Bos_b	ANCESTRAL SPECIES	28	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Hybrid Bos Indicus	MODERN SPECIES	1	CRHBP (ENSBIXG00005000840)	AGGF1 (ENSBIXG00005010286) #7	ENSBIXG00005010267	PDE8B (ENSBIXG00005010189) #9	ENSBIXG00005000677	WDR41 (ENSBIXG00005009893) #10	OTP (ENSBIXG00005009799) #11	TBCA (ENSBIXG00005000599) #14	ENSBIXG00005009736	AP3B1 (ENSBIXG00005009658) #17	ENSBIXG00005009460	SCAMP1 (ENSBIXG00005009438) #18	ARSB (ENSBIXG00005009357)	ENSBIXG00005009344	DMGDH (ENSBIXG00005009320) #21	BHMT2 (ENSBIXG00005009277) #22	BHMT (ENSBIXG00005009216) #23	JMY (ENSBIXG00005009181) #27	HOMER1 (ENSBIXG00005009070) #29	TENT2 (ENSBIXG00005008948)	CMYA5 (ENSBIXG00005000285) #31	MTX3 (ENSBIXG00005008721) #32	THBS4 (ENSBIXG00005008640) #34	SERINC5 (ENSBIXG00005008601) #36	GNPNAT1 (ENSBIXG00005008547)	STYX (ENSBIXG00005005788)	PSMC6 (ENSBIXG00005008491)	ERO1A (ENSBIXG00005008466)	GPR137C (ENSBIXG00005008431)	TXNDC16 (ENSBIXG00005008420)	PTGER2 (ENSBIXG00005008392)
Cow	MODERN SPECIES	1	F2RL1 (ENSBTAG00000034848)	S100Z (ENSBTAG00000020201)	CRHBP (ENSBTAG00000020202)	AGGF1 (ENSBTAG00000034823) #7	ZBED3 (ENSBTAG00000052845) #8	PDE8B (ENSBTAG00000020205) #9	WDR41 (ENSBTAG00000020212) #10	OTP (ENSBTAG00000009249) #11	TBCA (ENSBTAG00000003263) #14	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #17	SCAMP1 (ENSBTAG00000007371) #18	LHFPL2 (ENSBTAG00000007374) #19	ARSB (ENSBTAG00000008341)	DMGDH (ENSBTAG00000002110) #21	BHMT2 (ENSBTAG00000038234) #22	BHMT (ENSBTAG00000002255) #23	JMY (ENSBTAG00000025856) #27	HOMER1 (ENSBTAG00000025853) #29	TENT2 (ENSBTAG00000006751)	CMYA5 (ENSBTAG00000006823) #31	MTX3 (ENSBTAG00000013132) #32	THBS4 (ENSBTAG00000012866) #34	SERINC5 (ENSBTAG00000001619) #36	GNPNAT1 (ENSBTAG00000005344)	STYX (ENSBTAG00000046956)	PSMC6 (ENSBTAG00000015732)	ERO1A (ENSBTAG00000015716)	GPR137C (ENSBTAG00000000821)	TXNDC16 (ENSBTAG00000010399)	PTGER2 (ENSBTAG00000002163)
American bison	MODERN SPECIES	2972															DMGDH (ENSBBBG00000006372) #21	BHMT2 (ENSBBBG00000000267) #22	BHMT (ENSBBBG00000008720) #23	JMY (ENSBBBG00000024518) #27	HOMER1 (ENSBBBG00000006416) #29	TENT2 (ENSBBBG00000000172)	CMYA5 (ENSBBBG00000024715) #31	MTX3 (ENSBBBG00000024786) #32	THBS4 (ENSBBBG00000024887) #34	SERINC5 (ENSBBBG00000024930) #36	GNPNAT1 (ENSBBBG00000024956)	STYX (ENSBBBG00000025007)	PSMC6 (ENSBBBG00000006636)	ERO1A (ENSBBBG00000025111)	GPR137C (ENSBBBG00000006657)	TXNDC16 (ENSBBBG00000025167)	PTGER2 (ENSBBBG00000025180)
Caprinae	ANCESTRAL SPECIES	30	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a
Goat	MODERN SPECIES	1	F2RL1 (ENSCHIG00000026366)	S100Z (ENSCHIG00000018486)	CRHBP (ENSCHIG00000024251)	AGGF1 (ENSCHIG00000012662) #7	ZBED3 (ENSCHIG00000004171) #8	PDE8B (ENSCHIG00000023152) #9	WDR41 (ENSCHIG00000023139) #10	OTP (ENSCHIG00000018904) #11	TBCA (ENSCHIG00000021233) #14	AP3B1 (ENSCHIG00000018755) #17	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #18	LHFPL2 (ENSCHIG00000014180) #19	ARSB (ENSCHIG00000001349)	DMGDH (ENSCHIG00000021924) #21	BHMT2 (ENSCHIG00000027021) #22	BHMT (ENSCHIG00000009078) #23	JMY (ENSCHIG00000010675) #27	HOMER1 (ENSCHIG00000025789) #29	TENT2 (ENSCHIG00000019701)	CMYA5 (ENSCHIG00000026691) #31	MTX3 (ENSCHIG00000023759) #32	THBS4 (ENSCHIG00000024483) #34	ENSCHIG00000023657	SERINC5 (ENSCHIG00000024576) #36	GNPNAT1 (ENSCHIG00000020819)	ENSCHIG00000024198	STYX (ENSCHIG00000025828)	ENSCHIG00000017291	ERO1A (ENSCHIG00000004836)	GPR137C (ENSCHIG00000019666)
Camelidae	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949
Alpaca	MODERN SPECIES	3620														ARSB (ENSVPAG00000009396)	DMGDH (ENSVPAG00000009397) #21	BHMT2 (ENSVPAG00000009398) #22	BHMT (ENSVPAG00000009399) #23	JMY (ENSVPAG00000009400) #27	HOMER1 (ENSVPAG00000009401) #29	TENT2 (ENSVPAG00000009402)	CMYA5 (ENSVPAG00000009403) #31	ENSVPAG00000009404 #32	THBS4 (ENSVPAG00000009405) #34	SERINC5 (ENSVPAG00000009406) #36	SPZ1 (ENSVPAG00000009408)	ENSVPAG00000009409	FAM151B (ENSVPAG00000009411)	ANKRD34B (ENSVPAG00000009413)	MSH3 (ENSVPAG00000009414)	RASGRF2 (ENSVPAG00000009416)	CKMT2 (ENSVPAG00000009421)
Arabian camel	MODERN SPECIES	22	F2RL1 (ENSCDRG00005000688)	S100Z (ENSCDRG00005000678)	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645)	AGGF1 (ENSCDRG00005000618) #7	ZBED3 (ENSCDRG00005000608) #8	PDE8B (ENSCDRG00005000565) #9	WDR41 (ENSCDRG00005000509) #10	OTP (ENSCDRG00005000470) #11	TBCA (ENSCDRG00005000444) #14	AP3B1 (ENSCDRG00005000366) #17	SCAMP1 (ENSCDRG00005000299) #18	LHFPL2 (ENSCDRG00005000275) #19	ARSB (ENSCDRG00005000234)	DMGDH (ENSCDRG00005000085) #21	BHMT2 (ENSCDRG00005000037) #22	BHMT (ENSCDRG00005019118) #23	JMY (ENSCDRG00005019085) #27	HOMER1 (ENSCDRG00005018978) #29	TENT2 (ENSCDRG00005018837)	CMYA5 (ENSCDRG00005018749) #31	MTX3 (ENSCDRG00005018661) #32	THBS4 (ENSCDRG00005018591) #34	SERINC5 (ENSCDRG00005018540) #36	SPZ1 (ENSCDRG00005018521)	ZFYVE16 (ENSCDRG00005018452) #37	FAM151B (ENSCDRG00005018435)	ANKRD34B (ENSCDRG00005018428)	ENSCDRG00005018379	MSH3 (ENSCDRG00005017666)	RASGRF2 (ENSCDRG00005017402)
Atlantogenata	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Afrotheria	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Elephant	MODERN SPECIES	526	F2RL1 (ENSLAFG00000001287)	S100Z (ENSLAFG00000013035)	CRHBP (ENSLAFG00000013037)	ENSLAFG00000027371	AGGF1 (ENSLAFG00000012029) #7	ZBED3 (ENSLAFG00000001192) #8	PDE8B (ENSLAFG00000015612) #9	WDR41 (ENSLAFG00000005066) #10	OTP (ENSLAFG00000007704) #11	TBCA (ENSLAFG00000005316) #14	AP3B1 (ENSLAFG00000010496) #17	SCAMP1 (ENSLAFG00000009372) #18	LHFPL2 (ENSLAFG00000009378) #19	ARSB (ENSLAFG00000018055)	DMGDH (ENSLAFG00000018061) #21	BHMT2 (ENSLAFG00000018070) #22	BHMT (ENSLAFG00000018074) #23	JMY (ENSLAFG00000006216) #27	ENSLAFG00000029613	HOMER1 (ENSLAFG00000020530) #29	TENT2 (ENSLAFG00000009190)	ENSLAFG00000029991 #31	ENSLAFG00000013738 #31	MTX3 (ENSLAFG00000001716) #32	THBS4 (ENSLAFG00000008818) #34	SERINC5 (ENSLAFG00000009830) #36	SPZ1 (ENSLAFG00000009834)	ENSLAFG00000017608	FAM151B (ENSLAFG00000017619)	ANKRD34B (ENSLAFG00000010904)	ENSLAFG00000029028
Hyrax	MODERN SPECIES	2328																BHMT2 (ENSPCAG00000012519) #22
Tenrec	MODERN SPECIES	2866															DMGDH (ENSETEG00000010421) #21	ENSETEG00000010425 #22
Xenarthra	ANCESTRAL SPECIES	552												ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640
Armadillo	MODERN SPECIES	638											SCAMP1 (ENSDNOG00000006061) #18	LHFPL2 (ENSDNOG00000006076) #19	ARSB (ENSDNOG00000044463)	ENSDNOG00000040808	DMGDH (ENSDNOG00000004448) #21	BHMT2 (ENSDNOG00000005331) #22	BHMT (ENSDNOG00000005348) #23	JMY (ENSDNOG00000010684) #27	ENSDNOG00000008274 #29	TENT2 (ENSDNOG00000010446)
Sloth	MODERN SPECIES	2546															DMGDH (ENSCHOG00000014002) #21	BHMT2 (ENSCHOG00000014004) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Tasmanian devil	MODERN SPECIES		IQGAP2 (ENSSHAG00000001152)	F2R (ENSSHAG00000009153)	F2RL1 (ENSSHAG00000008088)	S100Z (ENSSHAG00000028739)	CRHBP (ENSSHAG00000006864)	AGGF1 (ENSSHAG00000004570) #7	PDE8B (ENSSHAG00000018263) #9	WDR41 (ENSSHAG00000018180) #10	OTP (ENSSHAG00000018090) #11	TBCA (ENSSHAG00000025953) #14	AP3B1 (ENSSHAG00000017224) #17	SCAMP1 (ENSSHAG00000016943) #18	LHFPL2 (ENSSHAG00000028883) #19	ARSB (ENSSHAG00000015401)	DMGDH (ENSSHAG00000014992) #21	BHMT2 (ENSSHAG00000014959) #22	BHMT (ENSSHAG00000014860) #23	JMY (ENSSHAG00000014317) #27	HOMER1 (ENSSHAG00000013501) #29	TENT2 (ENSSHAG00000012861)	ENSSHAG00000028352 #31	ENSSHAG00000026281	MTX3 (ENSSHAG00000010987) #32	THBS4 (ENSSHAG00000010181) #34	ENSSHAG00000009073 #36	ENSSHAG00000023163	MRPS36 (ENSSHAG00000025478)	ENSSHAG00000028749	CCNB1 (ENSSHAG00000007685)	SLC30A5 (ENSSHAG00000007104)	PIK3R1 (ENSSHAG00000008078)
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Wallaby	MODERN SPECIES	3843														ENSMEUG00000015019 #23	ENSMEUG00000015027	BHMT2 (ENSMEUG00000015033) #22
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00980000201383.C	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000179410	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553
Common wonbat	MODERN SPECIES	1011	ENSVURG00010016641	ENSVURG00010016651 #7	ENSVURG00010016663	ENSVURG00010016681	PDE8B (ENSVURG00010016850) #9	WDR41 (ENSVURG00010019111) #10	OTP (ENSVURG00010019123) #11	ENSVURG00010019130	ENSVURG00010019136	AP3B1 (ENSVURG00010019144) #17	ENSVURG00010019164	SCAMP1 (ENSVURG00010019174) #18	LHFPL2 (ENSVURG00010019186) #19	ARSB (ENSVURG00010019193)	DMGDH (ENSVURG00010019203) #21	BHMT2 (ENSVURG00010019219) #22	ENSVURG00010019232	JMY (ENSVURG00010019242) #27	HOMER1 (ENSVURG00010019264) #29	TENT2 (ENSVURG00010019292)	ENSVURG00010019330 #31	ENSVURG00010019348	MTX3 (ENSVURG00010019357) #32	THBS4 (ENSVURG00010019387) #34	SERINC5 (ENSVURG00010019446) #36	CDK7 (ENSVURG00010019454)	MRPS36 (ENSVURG00010019462)	ENSVURG00010019467	CCNB1 (ENSVURG00010019473)	ENSVURG00010019482	PIK3R1 (ENSVURG00010019506)
koala	DUPLICATION
koala	MODERN SPECIES	573															ENSPCIG00000031429 #21	ENSPCIG00000013845 #22	ENSPCIG00000013843
koala	MODERN SPECIES	73	S100Z (ENSPCIG00000036527)	CRHBP (ENSPCIG00000032088)	AGGF1 (ENSPCIG00000002077) #7	ENSPCIG00000002090	ENSPCIG00000002120	PDE8B (ENSPCIG00000002178) #9	WDR41 (ENSPCIG00000002260) #10	OTP (ENSPCIG00000014906) #11	ENSPCIG00000014903 #14	ENSPCIG00000017497 #17	ENSPCIG00000031686 #17	SCAMP1 (ENSPCIG00000024949) #18	LHFPL2 (ENSPCIG00000024952) #19	ARSB (ENSPCIG00000028419)	DMGDH (ENSPCIG00000013849) #21	ENSPCIG00000032210 #22	BHMT (ENSPCIG00000009033) #23	JMY (ENSPCIG00000011631) #27	HOMER1 (ENSPCIG00000011621) #29	TENT2 (ENSPCIG00000000393)	ENSPCIG00000000433 #31	ENSPCIG00000000662	MTX3 (ENSPCIG00000000698) #32	THBS4 (ENSPCIG00000000721) #34	SERINC5 (ENSPCIG00000000729) #36	CDK7 (ENSPCIG00000000747)	MRPS36 (ENSPCIG00000000776)	ENSPCIG00000000791	CCNB1 (ENSPCIG00000000812)	SLC30A5 (ENSPCIG00000000830)	PIK3R1 (ENSPCIG00000008648)
Theria	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Eutheria	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Atlantogenata	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Xenarthra	ANCESTRAL SPECIES	552											ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640
Sloth	MODERN SPECIES	11725																BHMT (ENSCHOG00000010884) #23
Armadillo	MODERN SPECIES	638										SCAMP1 (ENSDNOG00000006061) #18	LHFPL2 (ENSDNOG00000006076) #19	ARSB (ENSDNOG00000044463)	ENSDNOG00000040808	DMGDH (ENSDNOG00000004448) #21	BHMT2 (ENSDNOG00000005331) #22	BHMT (ENSDNOG00000005348) #23	JMY (ENSDNOG00000010684) #27	ENSDNOG00000008274 #29	TENT2 (ENSDNOG00000010446)
Afrotheria	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Elephant	MODERN SPECIES	526	S100Z (ENSLAFG00000013035)	CRHBP (ENSLAFG00000013037)	ENSLAFG00000027371	AGGF1 (ENSLAFG00000012029) #7	ZBED3 (ENSLAFG00000001192) #8	PDE8B (ENSLAFG00000015612) #9	WDR41 (ENSLAFG00000005066) #10	OTP (ENSLAFG00000007704) #11	TBCA (ENSLAFG00000005316) #14	AP3B1 (ENSLAFG00000010496) #17	SCAMP1 (ENSLAFG00000009372) #18	LHFPL2 (ENSLAFG00000009378) #19	ARSB (ENSLAFG00000018055)	DMGDH (ENSLAFG00000018061) #21	BHMT2 (ENSLAFG00000018070) #22	BHMT (ENSLAFG00000018074) #23	JMY (ENSLAFG00000006216) #27	ENSLAFG00000029613	HOMER1 (ENSLAFG00000020530) #29	TENT2 (ENSLAFG00000009190)	ENSLAFG00000029991 #31	ENSLAFG00000013738 #31	MTX3 (ENSLAFG00000001716) #32	THBS4 (ENSLAFG00000008818) #34	SERINC5 (ENSLAFG00000009830) #36	SPZ1 (ENSLAFG00000009834)	ENSLAFG00000017608	FAM151B (ENSLAFG00000017619)	ANKRD34B (ENSLAFG00000010904)	ENSLAFG00000029028	ENSLAFG00000015797
Tenrec	MODERN SPECIES	4102																BHMT (ENSETEG00000012379) #23
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Suina	ANCESTRAL SPECIES	11	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.f #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Pig	MODERN SPECIES	10	ENSSSCG00000050058	PDE8B (ENSSSCG00000014097) #9	ENSSSCG00000014096	ENSSSCG00000051837 #10	ENSSSCG00000014098 #10	OTP (ENSSSCG00000014099) #11	TBCA (ENSSSCG00000014100) #14	ENSSSCG00000034241	AP3B1 (ENSSSCG00000014101) #17	SCAMP1 (ENSSSCG00000034795) #18	LHFPL2 (ENSSSCG00000028536) #19	ARSB (ENSSSCG00000038535)	DMGDH (ENSSSCG00000014110) #21	BHMT2 (ENSSSCG00000054426) #22	ENSSSCG00000053764	BHMT (ENSSSCG00000014108) #23	JMY (ENSSSCG00000014112) #27	HOMER1 (ENSSSCG00000014113) #29	ENSSSCG00000043942	TENT2 (ENSSSCG00000014114)	CMYA5 (ENSSSCG00000026098) #31	MTX3 (ENSSSCG00000014116) #32	THBS4 (ENSSSCG00000014117) #34	SERINC5 (ENSSSCG00000014119) #36	SPZ1 (ENSSSCG00000014122)	ZFYVE16 (ENSSSCG00000014121) #37	FAM151B (ENSSSCG00000014123)	ANKRD34B (ENSSSCG00000014124)	ENSSSCG00000031117	MSH3 (ENSSSCG00000014126)	RASGRF2 (ENSSSCG00000014127)
Chacoan peccary	MODERN SPECIES	204	F2RL1 (ENSCWAG00000008039)	ENSCWAG00000008077	CRHBP (ENSCWAG00000008117)	AGGF1 (ENSCWAG00000008243) #7	ZBED3 (ENSCWAG00000008305) #8	PDE8B (ENSCWAG00000008441) #9	WDR41 (ENSCWAG00000010043) #10	OTP (ENSCWAG00000010193) #11	TBCA (ENSCWAG00000010250) #14	AP3B1 (ENSCWAG00000010356) #17	SCAMP1 (ENSCWAG00000010485) #18	LHFPL2 (ENSCWAG00000010566) #19	ARSB (ENSCWAG00000010599)	DMGDH (ENSCWAG00000010632) #21	BHMT2 (ENSCWAG00000010749) #22	BHMT (ENSCWAG00000010882) #23	JMY (ENSCWAG00000010992) #27	HOMER1 (ENSCWAG00000011069) #29	TENT2 (ENSCWAG00000011540)	CMYA5 (ENSCWAG00000011677) #31	MTX3 (ENSCWAG00000012419) #32	THBS4 (ENSCWAG00000012471) #34	SERINC5 (ENSCWAG00000012870) #36	SPZ1 (ENSCWAG00000013102)	ENSCWAG00000013133	FAM151B (ENSCWAG00000013202)	ANKRD34B (ENSCWAG00000013240)	ENSCWAG00000013255	MSH3 (ENSCWAG00000013447)	RASGRF2 (ENSCWAG00000017055)	CKMT2 (ENSCWAG00000017315)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Cetacea	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679
Monodontidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.k.a.a	ENSGT00550000074949	ENSGT00940000155679
Beluga whale	MODERN SPECIES	71	F2RL1 (ENSDLEG00000008016)	S100Z (ENSDLEG00000008008)	CRHBP (ENSDLEG00000007986)	AGGF1 (ENSDLEG00000007958) #7	ZBED3 (ENSDLEG00000007936) #8	PDE8B (ENSDLEG00000015062) #9	WDR41 (ENSDLEG00000014960) #10	OTP (ENSDLEG00000014945) #11	TBCA (ENSDLEG00000014906) #14	AP3B1 (ENSDLEG00000014741) #17	SCAMP1 (ENSDLEG00000014708) #18	LHFPL2 (ENSDLEG00000014699) #19	ARSB (ENSDLEG00000014686)	DMGDH (ENSDLEG00000014641) #21	BHMT2 (ENSDLEG00000014617) #22	BHMT (ENSDLEG00000014599) #23	JMY (ENSDLEG00000014574) #27	HOMER1 (ENSDLEG00000014455) #29	ENSDLEG00000014436	PAPD4 (ENSDLEG00000014384)	CMYA5 (ENSDLEG00000014094) #31	MTX3 (ENSDLEG00000014026) #32	THBS4 (ENSDLEG00000013983) #34	SERINC5 (ENSDLEG00000013937) #36	SPZ1 (ENSDLEG00000013919)	ZFYVE16 (ENSDLEG00000013817) #37	FAM151B (ENSDLEG00000013793)	ANKRD34B (ENSDLEG00000013781)	DHFR (ENSDLEG00000013740)	MSH3 (ENSDLEG00000013710)	RASGRF2 (ENSDLEG00000013582)
Narwhal	MODERN SPECIES	298	F2RL1 (ENSMMNG00015007943)	S100Z (ENSMMNG00015007958)	CRHBP (ENSMMNG00015007977)	AGGF1 (ENSMMNG00015008009) #7	ZBED3 (ENSMMNG00015008041) #8	PDE8B (ENSMMNG00015008112) #9	WDR41 (ENSMMNG00015008176) #10	OTP (ENSMMNG00015008215) #11	TBCA (ENSMMNG00015008230) #14	AP3B1 (ENSMMNG00015008260) #17	SCAMP1 (ENSMMNG00015008303) #18	LHFPL2 (ENSMMNG00015008328) #19	ARSB (ENSMMNG00015008346)	DMGDH (ENSMMNG00015008374) #21	BHMT2 (ENSMMNG00015008393) #22	BHMT (ENSMMNG00015008415) #23	JMY (ENSMMNG00015008440) #27	HOMER1 (ENSMMNG00015008534) #29	TENT2 (ENSMMNG00015008599)	ENSMMNG00015008614	CMYA5 (ENSMMNG00015008628) #31	MTX3 (ENSMMNG00015008650) #32	THBS4 (ENSMMNG00015008670) #34	SERINC5 (ENSMMNG00015008702) #36	SPZ1 (ENSMMNG00015008717)	ZFYVE16 (ENSMMNG00015008743) #37	FAM151B (ENSMMNG00015008794)	ANKRD34B (ENSMMNG00015008806)	ENSMMNG00015008817	MSH3 (ENSMMNG00015008850)	RASGRF2 (ENSMMNG00015008907)
Vaquita	MODERN SPECIES	14	F2RL1 (ENSPSNG00000005843)	S100Z (ENSPSNG00000005821)	CRHBP (ENSPSNG00000005773)	AGGF1 (ENSPSNG00000005724) #7	ZBED3 (ENSPSNG00000005710) #8	PDE8B (ENSPSNG00000005114) #9	WDR41 (ENSPSNG00000004776) #10	OTP (ENSPSNG00000004725) #11	TBCA (ENSPSNG00000004666) #14	AP3B1 (ENSPSNG00000004553) #17	SCAMP1 (ENSPSNG00000004447) #18	LHFPL2 (ENSPSNG00000004403) #19	ARSB (ENSPSNG00000004356)	DMGDH (ENSPSNG00000004287) #21	BHMT2 (ENSPSNG00000004227) #22	BHMT (ENSPSNG00000004175) #23	JMY (ENSPSNG00000004120) #27	HOMER1 (ENSPSNG00000004084) #29	ENSPSNG00000004038	TENT2 (ENSPSNG00000004010)	CMYA5 (ENSPSNG00000003900) #31	MTX3 (ENSPSNG00000003883) #32	THBS4 (ENSPSNG00000003786) #34	SERINC5 (ENSPSNG00000003740) #36	SPZ1 (ENSPSNG00000003718)	ZFYVE16 (ENSPSNG00000003688) #37	FAM151B (ENSPSNG00000003651)	ANKRD34B (ENSPSNG00000003636)	ENSPSNG00000003617	MSH3 (ENSPSNG00000003545)	RASGRF2 (ENSPSNG00000003476)
Dolphin	MODERN SPECIES	2963											SCAMP1 (ENSTTRG00000012953) #18	LHFPL2 (ENSTTRG00000012959) #19	ARSB (ENSTTRG00000012960)	DMGDH (ENSTTRG00000012962) #21	BHMT2 (ENSTTRG00000012963) #22	BHMT (ENSTTRG00000012964) #23	JMY (ENSTTRG00000012967) #27	HOMER1 (ENSTTRG00000012969) #29	PAPD4 (ENSTTRG00000012973)	ENSTTRG00000012976 #31	ENSTTRG00000012979 #32
Sperm whale	MODERN SPECIES	19	ENSPCTG00005002778	F2R (ENSPCTG00005002792)	F2RL1 (ENSPCTG00005002799)	S100Z (ENSPCTG00005002807)	AGGF1 (ENSPCTG00005002832) #7	ZBED3 (ENSPCTG00005002866) #8	PDE8B (ENSPCTG00005002983) #9	WDR41 (ENSPCTG00005003516) #10	OTP (ENSPCTG00005003577) #11	TBCA (ENSPCTG00005003597) #14	AP3B1 (ENSPCTG00005003664) #17	SCAMP1 (ENSPCTG00005003758) #18	LHFPL2 (ENSPCTG00005003792) #19	ARSB (ENSPCTG00005003811)	DMGDH (ENSPCTG00005003853) #21	BHMT (ENSPCTG00005003876) #23	JMY (ENSPCTG00005003899) #27	HOMER1 (ENSPCTG00005003925) #29	TENT2 (ENSPCTG00005003973)	ENSPCTG00005003995	CMYA5 (ENSPCTG00005004013) #31	MTX3 (ENSPCTG00005004032) #32	THBS4 (ENSPCTG00005004054) #34	SERINC5 (ENSPCTG00005004085) #36	ZFYVE16 (ENSPCTG00005004116) #37	FAM151B (ENSPCTG00005004159)	ANKRD34B (ENSPCTG00005004173)	DHFR (ENSPCTG00005004193)	MSH3 (ENSPCTG00005004305)	RASGRF2 (ENSPCTG00005004383)	MiCK (ENSPCTG00005004510)
Blue whale	MODERN SPECIES	14	S100Z (ENSBMSG00010005711)	CRHBP (ENSBMSG00010005714)	AGGF1 (ENSBMSG00010005734) #7	ZBED3 (ENSBMSG00010005760) #8	PDE8B (ENSBMSG00010005858) #9	WDR41 (ENSBMSG00010006297) #10	OTP (ENSBMSG00010006319) #11	ENSBMSG00010006335 #14	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #17	SCAMP1 (ENSBMSG00010006378) #18	LHFPL2 (ENSBMSG00010006395) #19	ARSB (ENSBMSG00010006407)	DMGDH (ENSBMSG00010006427) #21	BHMT2 (ENSBMSG00010006453) #22	BHMT (ENSBMSG00010006489) #23	JMY (ENSBMSG00010006531) #27	HOMER1 (ENSBMSG00010006587) #29	ENSBMSG00010006619	CMYA5 (ENSBMSG00010006643) #31	MTX3 (ENSBMSG00010006662) #32	THBS4 (ENSBMSG00010006679) #34	SERINC5 (ENSBMSG00010006731) #36	SPZ1 (ENSBMSG00010006746)	ENSBMSG00010006757	FAM151B (ENSBMSG00010006772)	ANKRD34B (ENSBMSG00010006782)	ENSBMSG00010006789	MSH3 (ENSBMSG00010006814)	RASGRF2 (ENSBMSG00010006843)	CKMT2 (ENSBMSG00010006888)
Pecora	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Yarkand deer	MODERN SPECIES	3	ENSCHYG00000007028 #9	WDR41 (ENSCHYG00000007090) #10	OTP (ENSCHYG00000007305) #11	TBCA (ENSCHYG00000007320) #14	ENSCHYG00000007338	ENSCHYG00000007344	ENSCHYG00000007356	AP3B1 (ENSCHYG00000007402) #17	SCAMP1 (ENSCHYG00000007687) #18	LHFPL2 (ENSCHYG00000007744) #19	ENSCHYG00000007782	DMGDH (ENSCHYG00000007878) #21	ENSCHYG00000008336	BHMT2 (ENSCHYG00000008358) #22	ENSCHYG00000008402	BHMT (ENSCHYG00000008466) #23	JMY (ENSCHYG00000008534) #27	HOMER1 (ENSCHYG00000008754) #29	ENSCHYG00000008919	CMYA5 (ENSCHYG00000009225) #31	ENSCHYG00000009493	MTX3 (ENSCHYG00000009541) #32	ENSCHYG00000009694	THBS4 (ENSCHYG00000009745) #34	SERINC5 (ENSCHYG00000010132) #36	ENSCHYG00000010280	GNPNAT1 (ENSCHYG00000010298)	STYX (ENSCHYG00000010360)	ENSCHYG00000010576	ERO1A (ENSCHYG00000010821)	GPR137C (ENSCHYG00000011206)
Percora_a	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Bovidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Caprinae	ANCESTRAL SPECIES	30	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Goat	MODERN SPECIES	1	S100Z (ENSCHIG00000018486)	CRHBP (ENSCHIG00000024251)	AGGF1 (ENSCHIG00000012662) #7	ZBED3 (ENSCHIG00000004171) #8	PDE8B (ENSCHIG00000023152) #9	WDR41 (ENSCHIG00000023139) #10	OTP (ENSCHIG00000018904) #11	TBCA (ENSCHIG00000021233) #14	AP3B1 (ENSCHIG00000018755) #17	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #18	LHFPL2 (ENSCHIG00000014180) #19	ARSB (ENSCHIG00000001349)	DMGDH (ENSCHIG00000021924) #21	BHMT2 (ENSCHIG00000027021) #22	BHMT (ENSCHIG00000009078) #23	JMY (ENSCHIG00000010675) #27	HOMER1 (ENSCHIG00000025789) #29	TENT2 (ENSCHIG00000019701)	CMYA5 (ENSCHIG00000026691) #31	MTX3 (ENSCHIG00000023759) #32	THBS4 (ENSCHIG00000024483) #34	ENSCHIG00000023657	SERINC5 (ENSCHIG00000024576) #36	GNPNAT1 (ENSCHIG00000020819)	ENSCHIG00000024198	STYX (ENSCHIG00000025828)	ENSCHIG00000017291	ERO1A (ENSCHIG00000004836)	GPR137C (ENSCHIG00000019666)	TXNDC16 (ENSCHIG00000016034)
Rambouillet Sheep	MODERN SPECIES	23	CRHBP (ENSOARG00020023047)	AGGF1 (ENSOARG00020023108) #7	ZBED3 (ENSOARG00020023150) #8	PDE8B (ENSOARG00020023251) #9	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #10	OTP (ENSOARG00020024451) #11	TBCA (ENSOARG00020024464) #14	AP3B1 (ENSOARG00020024527) #17	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #18	ENSOARG00020024626	LHFPL2 (ENSOARG00020024639) #19	ARSB (ENSOARG00020002992)	DMGDH (ENSOARG00020003036) #21	BHMT (ENSOARG00020003124) #23	JMY (ENSOARG00020003148) #27	HOMER1 (ENSOARG00020003237) #29	TENT2 (ENSOARG00020003488)	CMYA5 (ENSOARG00020003611) #31	MTX3 (ENSOARG00020004194) #32	THBS4 (ENSOARG00020004359) #34	SERINC5 (ENSOARG00020004451) #36	GNPNAT1 (ENSOARG00020004685)	STYX (ENSOARG00020004723)	ENSOARG00020004750	PSMC6 (ENSOARG00020004771)	ERO1A (ENSOARG00020004856)	GPR137C (ENSOARG00020004938)	TXNDC16 (ENSOARG00020004983)	PTGER2 (ENSOARG00020005033)
Bovinae	ANCESTRAL SPECIES	33	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.j	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Bos	ANCESTRAL SPECIES	31	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Bos_a	ANCESTRAL SPECIES	26	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Wild yak	MODERN SPECIES	2423														DMGDH (ENSBMUG00000017674) #21	BHMT2 (ENSBMUG00000017646) #22	BHMT (ENSBMUG00000017574) #23	JMY (ENSBMUG00000017516) #27	HOMER1 (ENSBMUG00000017488) #29	TENT2 (ENSBMUG00000017424)	CMYA5 (ENSBMUG00000017368) #31
Domestic yak	MODERN SPECIES	2	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412) #7	ZBED3 (ENSBGRG00000007380) #8	PDE8B (ENSBGRG00000006555) #9	WDR41 (ENSBGRG00000006363) #10	OTP (ENSBGRG00000006298) #11	TBCA (ENSBGRG00000006236) #14	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #17	SCAMP1 (ENSBGRG00000005900) #18	LHFPL2 (ENSBGRG00000005875) #19	ENSBGRG00000005848	ARSB (ENSBGRG00000005773)	DMGDH (ENSBGRG00000005663) #21	ENSBGRG00000005598 #22	BHMT (ENSBGRG00000005578) #23	JMY (ENSBGRG00000005553) #27	HOMER1 (ENSBGRG00000005430) #29	TENT2 (ENSBGRG00000005235)	CMYA5 (ENSBGRG00000005128) #31	MTX3 (ENSBGRG00000005019) #32	THBS4 (ENSBGRG00000004748) #34	SERINC5 (ENSBGRG00000004575) #36	GNPNAT1 (ENSBGRG00000004543)	STYX (ENSBGRG00000004422)	ENSBGRG00000004401	PSMC6 (ENSBGRG00000004257)	ERO1A (ENSBGRG00000004190)	GPR137C (ENSBGRG00000004169)	TXNDC16 (ENSBGRG00000004037)	PTGER2 (ENSBGRG00000004014)
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640.g	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A	ENSGT00390000007753.b	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a	ENSGT00390000007857
Hybrid Bos Indicus	MODERN SPECIES	1	AGGF1 (ENSBIXG00005010286) #7	ENSBIXG00005010267	PDE8B (ENSBIXG00005010189) #9	ENSBIXG00005000677	WDR41 (ENSBIXG00005009893) #10	OTP (ENSBIXG00005009799) #11	TBCA (ENSBIXG00005000599) #14	ENSBIXG00005009736	AP3B1 (ENSBIXG00005009658) #17	ENSBIXG00005009460	SCAMP1 (ENSBIXG00005009438) #18	ARSB (ENSBIXG00005009357)	ENSBIXG00005009344	DMGDH (ENSBIXG00005009320) #21	BHMT2 (ENSBIXG00005009277) #22	BHMT (ENSBIXG00005009216) #23	JMY (ENSBIXG00005009181) #27	HOMER1 (ENSBIXG00005009070) #29	TENT2 (ENSBIXG00005008948)	CMYA5 (ENSBIXG00005000285) #31	MTX3 (ENSBIXG00005008721) #32	THBS4 (ENSBIXG00005008640) #34	SERINC5 (ENSBIXG00005008601) #36	GNPNAT1 (ENSBIXG00005008547)	STYX (ENSBIXG00005005788)	PSMC6 (ENSBIXG00005008491)	ERO1A (ENSBIXG00005008466)	GPR137C (ENSBIXG00005008431)	TXNDC16 (ENSBIXG00005008420)	PTGER2 (ENSBIXG00005008392)	SPG21 (ENSBIXG00005008355)
Cow	MODERN SPECIES	1	S100Z (ENSBTAG00000020201)	CRHBP (ENSBTAG00000020202)	AGGF1 (ENSBTAG00000034823) #7	ZBED3 (ENSBTAG00000052845) #8	PDE8B (ENSBTAG00000020205) #9	WDR41 (ENSBTAG00000020212) #10	OTP (ENSBTAG00000009249) #11	TBCA (ENSBTAG00000003263) #14	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #17	SCAMP1 (ENSBTAG00000007371) #18	LHFPL2 (ENSBTAG00000007374) #19	ARSB (ENSBTAG00000008341)	DMGDH (ENSBTAG00000002110) #21	BHMT2 (ENSBTAG00000038234) #22	BHMT (ENSBTAG00000002255) #23	JMY (ENSBTAG00000025856) #27	HOMER1 (ENSBTAG00000025853) #29	TENT2 (ENSBTAG00000006751)	CMYA5 (ENSBTAG00000006823) #31	MTX3 (ENSBTAG00000013132) #32	THBS4 (ENSBTAG00000012866) #34	SERINC5 (ENSBTAG00000001619) #36	GNPNAT1 (ENSBTAG00000005344)	STYX (ENSBTAG00000046956)	PSMC6 (ENSBTAG00000015732)	ERO1A (ENSBTAG00000015716)	GPR137C (ENSBTAG00000000821)	TXNDC16 (ENSBTAG00000010399)	PTGER2 (ENSBTAG00000002163)	SPG21 (ENSBTAG00000011540)
American bison	MODERN SPECIES	2972														DMGDH (ENSBBBG00000006372) #21	BHMT2 (ENSBBBG00000000267) #22	BHMT (ENSBBBG00000008720) #23	JMY (ENSBBBG00000024518) #27	HOMER1 (ENSBBBG00000006416) #29	TENT2 (ENSBBBG00000000172)	CMYA5 (ENSBBBG00000024715) #31	MTX3 (ENSBBBG00000024786) #32	THBS4 (ENSBBBG00000024887) #34	SERINC5 (ENSBBBG00000024930) #36	GNPNAT1 (ENSBBBG00000024956)	STYX (ENSBBBG00000025007)	PSMC6 (ENSBBBG00000006636)	ERO1A (ENSBBBG00000025111)	GPR137C (ENSBBBG00000006657)	TXNDC16 (ENSBBBG00000025167)	PTGER2 (ENSBBBG00000025180)	SPG21 (ENSBBBG00000007770)
Siberian musk deer	MODERN SPECIES	69	CRHBP (ENSMMSG00000015697)	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751) #7	ZBED3 (ENSMMSG00000015777) #8	PDE8B (ENSMMSG00000015917) #9	WDR41 (ENSMMSG00000017180) #10	OTP (ENSMMSG00000017274) #11	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #17	SCAMP1 (ENSMMSG00000017674) #18	LHFPL2 (ENSMMSG00000017736) #19	ARSB (ENSMMSG00000017759)	DMGDH (ENSMMSG00000017858) #21	BHMT2 (ENSMMSG00000017965) #22	BHMT (ENSMMSG00000018085) #23	JMY (ENSMMSG00000018183) #27
Camelidae	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Arabian camel	MODERN SPECIES	22	S100Z (ENSCDRG00005000678)	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645)	AGGF1 (ENSCDRG00005000618) #7	ZBED3 (ENSCDRG00005000608) #8	PDE8B (ENSCDRG00005000565) #9	WDR41 (ENSCDRG00005000509) #10	OTP (ENSCDRG00005000470) #11	TBCA (ENSCDRG00005000444) #14	AP3B1 (ENSCDRG00005000366) #17	SCAMP1 (ENSCDRG00005000299) #18	LHFPL2 (ENSCDRG00005000275) #19	ARSB (ENSCDRG00005000234)	DMGDH (ENSCDRG00005000085) #21	BHMT2 (ENSCDRG00005000037) #22	BHMT (ENSCDRG00005019118) #23	JMY (ENSCDRG00005019085) #27	HOMER1 (ENSCDRG00005018978) #29	TENT2 (ENSCDRG00005018837)	CMYA5 (ENSCDRG00005018749) #31	MTX3 (ENSCDRG00005018661) #32	THBS4 (ENSCDRG00005018591) #34	SERINC5 (ENSCDRG00005018540) #36	SPZ1 (ENSCDRG00005018521)	ZFYVE16 (ENSCDRG00005018452) #37	FAM151B (ENSCDRG00005018435)	ANKRD34B (ENSCDRG00005018428)	ENSCDRG00005018379	MSH3 (ENSCDRG00005017666)	RASGRF2 (ENSCDRG00005017402)	CKMT2 (ENSCDRG00005017343)
Alpaca	MODERN SPECIES	3620													ARSB (ENSVPAG00000009396)	DMGDH (ENSVPAG00000009397) #21	BHMT2 (ENSVPAG00000009398) #22	BHMT (ENSVPAG00000009399) #23	JMY (ENSVPAG00000009400) #27	HOMER1 (ENSVPAG00000009401) #29	TENT2 (ENSVPAG00000009402)	CMYA5 (ENSVPAG00000009403) #31	ENSVPAG00000009404 #32	THBS4 (ENSVPAG00000009405) #34	SERINC5 (ENSVPAG00000009406) #36	SPZ1 (ENSVPAG00000009408)	ENSVPAG00000009409	FAM151B (ENSVPAG00000009411)	ANKRD34B (ENSVPAG00000009413)	MSH3 (ENSVPAG00000009414)	RASGRF2 (ENSVPAG00000009416)	CKMT2 (ENSVPAG00000009421)	ZCCHC9 (ENSVPAG00000009423)
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Carnivora	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Caniformia	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Mustelinae	ANCESTRAL SPECIES	38	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000153593.c.b	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00940000170977	ENSGT00550000074949	ENSGT00940000155679
Ferret	MODERN SPECIES	286	F2RL1 (ENSMPUG00000005551)	CRHBP (ENSMPUG00000005538)	AGGF1 (ENSMPUG00000005518) #7	PDE8B (ENSMPUG00000005262) #9	WDR41 (ENSMPUG00000005197) #10	ENSMPUG00000018800	OTP (ENSMPUG00000005191) #11	ENSMPUG00000005179	ENSMPUG00000018799	ENSMPUG00000005174	AP3B1 (ENSMPUG00000005160) #17	SCAMP1 (ENSMPUG00000005152) #18	LHFPL2 (ENSMPUG00000005146) #19	ARSB (ENSMPUG00000005100)	DMGDH (ENSMPUG00000005093) #21	BHMT (ENSMPUG00000005014) #23	JMY (ENSMPUG00000005003) #27	HOMER1 (ENSMPUG00000004991) #29	TENT2 (ENSMPUG00000004983)	CMYA5 (ENSMPUG00000004971) #31	MTX3 (ENSMPUG00000004895) #32	THBS4 (ENSMPUG00000004875) #34	SERINC5 (ENSMPUG00000004807) #36	SPZ1 (ENSMPUG00000019669)	ZFYVE16 (ENSMPUG00000004802) #37	ENSMPUG00000004800
American mink	MODERN SPECIES	112	F2R (ENSNVIG00000002863)	F2RL1 (ENSNVIG00000002854)	CRHBP (ENSNVIG00000002829)	AGGF1 (ENSNVIG00000002783) #7	ZBED3 (ENSNVIG00000002773) #8	ENSNVIG00000002723 #9	WDR41 (ENSNVIG00000002651) #10	OTP (ENSNVIG00000002637) #11	TBCA (ENSNVIG00000002606) #14	ENSNVIG00000002585	AP3B1 (ENSNVIG00000002504) #17	SCAMP1 (ENSNVIG00000002476) #18	LHPL2 (ENSNVIG00000002454) #19	ARSB (ENSNVIG00000002402)	DMGDH (ENSNVIG00000002369) #21	BHMT (ENSNVIG00000002335) #23	ENSNVIG00000002323	JMY (ENSNVIG00000002287) #27	HOMER1 (ENSNVIG00000002206) #29	TENT2 (ENSNVIG00000002064)	CMYA5 (ENSNVIG00000002033) #31	MTX3 (ENSNVIG00000002002) #32	THBS4 (ENSNVIG00000001935) #34	SERINC5 (ENSNVIG00000001875) #36	SPZ1 (ENSNVIG00000001867)	ZFYVE16 (ENSNVIG00000001838) #37	F151B (ENSNVIG00000001809)	AN34B (ENSNVIG00000001804)	ENSNVIG00000001739	MSH3 (ENSNVIG00000000962)	ENSNVIG00000000947
Ursidae	ANCESTRAL SPECIES	16	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.h.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Ursus	ANCESTRAL SPECIES	3	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.h.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.c	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
American black bear	MODERN SPECIES	429														DMGDH (ENSUAMG00000024639) #21	BHMT2 (ENSUAMG00000024640) #22	BHMT (ENSUAMG00000024641) #23	JMY (ENSUAMG00000024643) #27	HOMER1 (ENSUAMG00000024644) #29
Polar bear	MODERN SPECIES	447										ENSUMAG00000001815 #17	SCAMP1 (ENSUMAG00000001830) #18	LHFPL2 (ENSUMAG00000001920) #19	ARSB (ENSUMAG00000001958)	DMGDH (ENSUMAG00000001972) #21	BHMT2 (ENSUMAG00000001981) #22	BHMT (ENSUMAG00000001999) #23	JMY (ENSUMAG00000002008) #27	HOMER1 (ENSUMAG00000002034) #29	ENSUMAG00000002085 #29	TENT2 (ENSUMAG00000002121)	CMYA5 (ENSUMAG00000002136) #31	MTX3 (ENSUMAG00000002205) #32	THBS4 (ENSUMAG00000002341) #34	SERINC5 (ENSUMAG00000002880) #36	SPZ1 (ENSUMAG00000002883)	ZFYVE16 (ENSUMAG00000002887) #37	FAM151B (ENSUMAG00000002893)	ENSUMAG00000002915	MSH3 (ENSUMAG00000002941)	RASGRF2 (ENSUMAG00000003013)	CKMT2 (ENSUMAG00000003245)
Giant Panda	MODERN SPECIES	13	F2R (ENSAMEG00000018602)	F2RL1 (ENSAMEG00000001809)	CRHBP (ENSAMEG00000001817)	AGGF1 (ENSAMEG00000001833) #7	PDE8B (ENSAMEG00000005971) #9	ENSAMEG00000028764	WDR41 (ENSAMEG00000005933) #10	OTP (ENSAMEG00000028076) #11	TBCA (ENSAMEG00000027837) #14	AP3B1 (ENSAMEG00000005816) #17	SCAMP1 (ENSAMEG00000005799) #18	LHFPL2 (ENSAMEG00000005794) #19	ARSB (ENSAMEG00000005783)	DMGDH (ENSAMEG00000005739) #21	BHMT2 (ENSAMEG00000005719) #22	BHMT (ENSAMEG00000005696) #23	JMY (ENSAMEG00000015594) #27	HOMER1 (ENSAMEG00000015607) #29	TENT2 (ENSAMEG00000015619)	CMYA5 (ENSAMEG00000015633) #31	MTX3 (ENSAMEG00000015643) #32	THBS4 (ENSAMEG00000015652) #34	SERINC5 (ENSAMEG00000015721) #36	SPZ1 (ENSAMEG00000019078)	ZFYVE16 (ENSAMEG00000015737) #37	FAM151B (ENSAMEG00000015740)	ANKRD34B (ENSAMEG00000019111)	ENSAMEG00000015750	MSH3 (ENSAMEG00000015754)	RASGRF2 (ENSAMEG00000015782)	ENSAMEG00000028748
Canidae	ANCESTRAL SPECIES	52	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.e.a.a	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000162210.m.b	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT00940000162350.b.b	ENSGT00940000162350.b.a	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.e.a.a.b	ENSGT00550000074949
Dog	MODERN SPECIES	22	AGGF1 (ENSCAFG00845010001) #7	ZBED3 (ENSCAFG00845009893) #8	PDE8B (ENSCAFG00845009245) #9	WDR41 (ENSCAFG00845008881) #10	OTP (ENSCAFG00845008819) #11	TBCA (ENSCAFG00845008735) #14	AP3B1 (ENSCAFG00845008344) #17	ENSCAFG00845008191	SCAMP1 (ENSCAFG00845008131) #18	ENSCAFG00845008040 #19	ENSCAFG00845007955	ENSCAFG00845007889	ARSB (ENSCAFG00845007767)	DMGDH (ENSCAFG00845007613) #21	BHMT2 (ENSCAFG00845007477) #22	BHMT (ENSCAFG00845007347) #23	JMY (ENSCAFG00845007064) #27	HOMER1 (ENSCAFG00845006728) #29	TENT2 (ENSCAFG00845006530)	CMYA5 (ENSCAFG00845006378) #31	MTX3 (ENSCAFG00845006230) #32	THBS4 (ENSCAFG00845006098) #34	ENSCAFG00845006060	SERINC5 (ENSCAFG00845006037) #36	SPZ1 (ENSCAFG00845006011)	ZFYVE16 (ENSCAFG00845005949) #37	FAM151B (ENSCAFG00845005890)	ANKRD34B (ENSCAFG00845005864)	ENSCAFG00845005830	MSH3 (ENSCAFG00845022317)	ENSCAFG00845022211
Dingo	MODERN SPECIES	138	AGGF1 (ENSCAFG00020025988) #7	ENSCAFG00020025990 #8	PDE8B (ENSCAFG00020026022) #9	WDR41 (ENSCAFG00020026182) #10	OTP (ENSCAFG00020026185) #11	TBCA (ENSCAFG00020026187) #14	AP3B1 (ENSCAFG00020026199) #17	SCAMP1 (ENSCAFG00020026258) #18	LHFPL2 (ENSCAFG00020026266) #19	ENSCAFG00020026271	ENSCAFG00020026272	ENSCAFG00020026273	ARSB (ENSCAFG00020026275)	DMGDH (ENSCAFG00020026278) #21	BHMT2 (ENSCAFG00020026283) #22	BHMT (ENSCAFG00020026286) #23	JMY (ENSCAFG00020026290) #27	HOMER1 (ENSCAFG00020026292) #29	TENT2 (ENSCAFG00020026305)	CMYA5 (ENSCAFG00020026312) #31	MTX3 (ENSCAFG00020026315) #32	THBS4 (ENSCAFG00020026420) #34	ENSCAFG00020026808	ENSCAFG00020026810	SERINC5 (ENSCAFG00020026812) #36	SPZ1 (ENSCAFG00020026814)	ZFYVE16 (ENSCAFG00020026815) #37	ENSCAFG00020026816	FAM151B (ENSCAFG00020026818)	ANKRD34B (ENSCAFG00020026819)	ENSCAFG00020000151
Red fox	MODERN SPECIES	27	ENSVVUG00000025148	F2RL2 (ENSVVUG00000025145)	IQGAP2 (ENSVVUG00000025132)	F2R (ENSVVUG00000025128)	F2RL1 (ENSVVUG00000025124)	CRHBP (ENSVVUG00000025121)	AGGF1 (ENSVVUG00000025114) #7	PDE8B (ENSVVUG00000025106) #9	WDR41 (ENSVVUG00000025096) #10	OTP (ENSVVUG00000025094) #11	ENSVVUG00000025093	AP3B1 (ENSVVUG00000025056) #17	SCAMP1 (ENSVVUG00000025046) #18	LHFPL2 (ENSVVUG00000025039) #19	ENSVVUG00000025030	BHMT (ENSVVUG00000025022) #23	BHMT2 (ENSVVUG00000025018) #22	DMGDH (ENSVVUG00000025013) #21	JMY (ENSVVUG00000024988) #27	HOMER1 (ENSVVUG00000024979) #29	TENT2 (ENSVVUG00000024977)	CMYA5 (ENSVVUG00000024975) #31	ENSVVUG00000024973	MTX3 (ENSVVUG00000024969) #32	THBS4 (ENSVVUG00000024964) #34	SERINC5 (ENSVVUG00000024958) #36	SPZ1 (ENSVVUG00000024956)	ZFYVE16 (ENSVVUG00000024953) #37	FAM151B (ENSVVUG00000024951)	ANKRD34B (ENSVVUG00000024950)	ENSVVUG00000024949
Felidae	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Panthera	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00940000161069.h	ENSGT00390000010283	ENSGT00550000074949	ENSGT00950000184259
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00390000009443.j	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00950000183010.a.a.a.b.b	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00940000161069.h	ENSGT00390000010283	ENSGT00550000074949
leopard	MODERN SPECIES	40	CRHBP (ENSPPRG00000002387)	AGGF1 (ENSPPRG00000004438) #7	ZBED3 (ENSPPRG00000017742) #8	PDE8B (ENSPPRG00000012726) #9	WDR41 (ENSPPRG00000015058) #10	OTP (ENSPPRG00000015334) #11	TBCA (ENSPPRG00000018237) #14	AP3B1 (ENSPPRG00000019993) #17	ENSPPRG00000020501	SCAMP1 (ENSPPRG00000000330) #18	LHFPL2 (ENSPPRG00000000681) #19	ENSPPRG00000000967	ARSB (ENSPPRG00000002867)	DMGDH (ENSPPRG00000002973) #21	BHMT2 (ENSPPRG00000003496) #22	BHMT (ENSPPRG00000004028) #23	JMY (ENSPPRG00000004743) #27	HOMER1 (ENSPPRG00000006866) #29	TENT2 (ENSPPRG00000008396)	ENSPPRG00000018657	CMYA5 (ENSPPRG00000010137) #31	MTX3 (ENSPPRG00000010541) #32	ENSPPRG00000010693 #32	THBS4 (ENSPPRG00000011385) #34	SERINC5 (ENSPPRG00000012240) #36	SPZ1 (ENSPPRG00000019097)	ZFYVE16 (ENSPPRG00000012892) #37	FAM151B (ENSPPRG00000013219)	ANKRD34B (ENSPPRG00000019199)	ENSPPRG00000014559	ENSPPRG00000015793
lion	MODERN SPECIES		S100Z (ENSPLOG00000001701)	CRHBP (ENSPLOG00000001686)	AGGF1 (ENSPLOG00000001638) #7	ZBED3 (ENSPLOG00000001610) #8	PDE8B (ENSPLOG00000001335) #9	WDR41 (ENSPLOG00000001110) #10	OTP (ENSPLOG00000001071) #11	TBCA (ENSPLOG00000001046) #14	AP3B1 (ENSPLOG00000000902) #17	SCAMP1 (ENSPLOG00000000849) #18	LHFPL2 (ENSPLOG00000000832) #19	ENSPLOG00000000818	ARSB (ENSPLOG00000000803)	DMGDH (ENSPLOG00000000773) #21	BHMT2 (ENSPLOG00000000718) #22	BHMT (ENSPLOG00000000665) #23	JMY (ENSPLOG00000000614) #27	HOMER1 (ENSPLOG00000000572) #29	TENT2 (ENSPLOG00000000530)	ENSPLOG00000000504	CMYA5 (ENSPLOG00000000485) #31	MTX3 (ENSPLOG00000000460) #32	THBS4 (ENSPLOG00000000412) #34	SERINC5 (ENSPLOG00000000355) #36	SPZ1 (ENSPLOG00000000337)	ENSPLOG00000000257	ZFYVE16 (ENSPLOG00000000241) #37	FAM151B (ENSPLOG00000000229)	ANKRD34B (ENSPLOG00000000219)	ENSPLOG00000000207	MSH3 (ENSPLOG00000000131)
Tiger	MODERN SPECIES	134	F2R (ENSPTIG00000021894)	F2RL1 (ENSPTIG00000021859)	S100Z (ENSPTIG00000021832)	CRHBP (ENSPTIG00000021691)	AGGF1 (ENSPTIG00000021519) #7	PDE8B (ENSPTIG00000014747) #9	WDR41 (ENSPTIG00000011923) #10	OTP (ENSPTIG00000011169) #11	TBCA (ENSPTIG00000009506) #14	AP3B1 (ENSPTIG00000008485) #17	SCAMP1 (ENSPTIG00000007335) #18	LHFPL2 (ENSPTIG00000006957) #19	ARSB (ENSPTIG00000003156)	DMGDH (ENSPTIG00000021430) #21	BHMT2 (ENSPTIG00000020984) #22	BHMT (ENSPTIG00000020191) #23	JMY (ENSPTIG00000019858) #27	HOMER1 (ENSPTIG00000018119) #29	TENT2 (ENSPTIG00000015267)	CMYA5 (ENSPTIG00000014447) #31	ENSPTIG00000014075 #32	THBS4 (ENSPTIG00000012684) #34	SERINC5 (ENSPTIG00000011391) #36	SPZ1 (ENSPTIG00000004689)	ZFYVE16 (ENSPTIG00000010471) #37	FAM151B (ENSPTIG00000009413)	ANKRD34B (ENSPTIG00000004658)	ENSPTIG00000007949	ENSPTIG00000006963	MSH3 (ENSPTIG00000000043)	ENSPTIG00000021977
Cat	MODERN SPECIES		F2RL2 (ENSFCAG00000040850)	F2R (ENSFCAG00000003325)	S100Z (ENSFCAG00000044986)	CRHBP (ENSFCAG00000023090)	AGGF1 (ENSFCAG00000018724) #7	ZBED3 (ENSFCAG00000044339) #8	PDE8B (ENSFCAG00000005432) #9	WDR41 (ENSFCAG00000026146) #10	OTP (ENSFCAG00000032267) #11	TBCA (ENSFCAG00000026107) #14	AP3B1 (ENSFCAG00000030762) #17	SCAMP1 (ENSFCAG00000007805) #18	ARSB (ENSFCAG00000033754)	ENSFCAG00000035649	DMGDH (ENSFCAG00000011882) #21	BHMT (ENSFCAG00000040239) #23	JMY (ENSFCAG00000025959) #27	HOMER1 (ENSFCAG00000015755) #29	TENT2 (ENSFCAG00000027560)	CMYA5 (ENSFCAG00000000223) #31	MTX3 (ENSFCAG00000003877) #32	THBS4 (ENSFCAG00000003879) #34	SERINC5 (ENSFCAG00000003881) #36	SPZ1 (ENSFCAG00000043127)	ZFYVE16 (ENSFCAG00000025974) #37	FAM151B (ENSFCAG00000042765)	ANKRD34B (ENSFCAG00000028474)	ENSFCAG00000026745	MSH3 (ENSFCAG00000005686)	RASGRF2 (ENSFCAG00000022975)	CKMT2 (ENSFCAG00000004820)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Equus	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Donkey	MODERN SPECIES	29	S100Z (ENSEASG00005001816)	CRHBP (ENSEASG00005001822)	AGGF1 (ENSEASG00005001829) #7	ZBED3 (ENSEASG00005034455) #8	PDE8B (ENSEASG00005001845) #9	WDR41 (ENSEASG00005001862) #10	OTP (ENSEASG00005001863) #11	ENSEASG00005032921	ENSEASG00005028729 #14	AP3B1 (ENSEASG00005001889) #17	SCAMP1 (ENSEASG00005001900) #18	LHFPL2 (ENSEASG00005001904) #19	ARSB (ENSEASG00005001910)	DMGDH (ENSEASG00005001920) #21	BHMT2 (ENSEASG00005001941) #22	BHMT (ENSEASG00005001952) #23	JMY (ENSEASG00005001982) #27	HOMER1 (ENSEASG00005001988) #29	TENT2 (ENSEASG00005001993)	CMYA5 (ENSEASG00005037295) #31	MTX3 (ENSEASG00005002019) #32	THBS4 (ENSEASG00005002059) #34	SERINC5 (ENSEASG00005002191) #36	ENSEASG00005002196	SPZ1 (ENSEASG00005002199)	ZFYVE16 (ENSEASG00005002242) #37	FAM151B (ENSEASG00005002548)	ANKRD34B (ENSEASG00005002555)	ENSEASG00005002559	MSH3 (ENSEASG00005002611)	RASGRF2 (ENSEASG00005002852)
Horse	MODERN SPECIES	5	F2RL1 (ENSECAG00000002867)	S100Z (ENSECAG00000000977)	F2R (ENSECAG00000004055)	CRHBP (ENSECAG00000017949)	ZBED3 (ENSECAG00000040464) #8	PDE8B (ENSECAG00000012189) #9	WDR41 (ENSECAG00000009496) #10	OTP (ENSECAG00000009423) #11	TBCA (ENSECAG00000009383) #14	AP3B1 (ENSECAG00000022849) #17	SCAMP1 (ENSECAG00000021921) #18	LHFPL2 (ENSECAG00000021890) #19	ARSB (ENSECAG00000020847)	BHMT2 (ENSECAG00000018440) #22	DMGDH (ENSECAG00000019851) #21	BHMT (ENSECAG00000015626) #23	ENSECAG00000052194	JMY (ENSECAG00000014968) #27	ENSECAG00000039002 #29	HOMER1 (ENSECAG00000013350) #29	TENT2 (ENSECAG00000012698)	CMYA5 (ENSECAG00000034911) #31	MTX3 (ENSECAG00000008541) #32	THBS4 (ENSECAG00000019665) #34	SERINC5 (ENSECAG00000016315) #36	ENSECAG00000046435	SPZ1 (ENSECAG00000005453)	ZFYVE16 (ENSECAG00000013918) #37	ENSECAG00000056306	FAM151B (ENSECAG00000013808)	ANKRD34B (ENSECAG00000004587)
Chiroptera	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Microbat	MODERN SPECIES	937	IQGAP2 (ENSMLUG00000006695)	F2R (ENSMLUG00000029641)	ENSMLUG00000006790	CRHBP (ENSMLUG00000025557)	AGGF1 (ENSMLUG00000016792) #7	PDE8B (ENSMLUG00000016798) #9	WDR41 (ENSMLUG00000016814) #10	OTP (ENSMLUG00000028781) #11	TBCA (ENSMLUG00000001087) #14	AP3B1 (ENSMLUG00000006637) #17	SCAMP1 (ENSMLUG00000006679) #18	LHFPL2 (ENSMLUG00000006700) #19	ARSB (ENSMLUG00000001949)	DMGDH (ENSMLUG00000009128) #21	BHMT2 (ENSMLUG00000009152) #22	BHMT (ENSMLUG00000009164) #23	JMY (ENSMLUG00000000275) #27	HOMER1 (ENSMLUG00000010972) #29	TENT2 (ENSMLUG00000010990)	CMYA5 (ENSMLUG00000011014) #31	ENSMLUG00000026872	MTX3 (ENSMLUG00000013201) #32	THBS4 (ENSMLUG00000013206) #34	SERINC5 (ENSMLUG00000013220) #36	ENSMLUG00000029886	ENSMLUG00000014110	ENSMLUG00000002842	FAM151B (ENSMLUG00000002854)	ANKRD34B (ENSMLUG00000002857)	ENSMLUG00000012200	MSH3 (ENSMLUG00000001865)
Greater horseshoe bat	MODERN SPECIES	25	S100Z (ENSRFEG00010015950)	AGGF1 (ENSRFEG00010016035) #7	ZBED3 (ENSRFEG00010016086) #8	PDE8B (ENSRFEG00010016179) #9	WDR41 (ENSRFEG00010017690) #10	OTP (ENSRFEG00010017860) #11	TBCA (ENSRFEG00010017900) #14	AP3B1 (ENSRFEG00010018051) #17	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #18	LHFPL2 (ENSRFEG00010018294) #19	ARSB (ENSRFEG00010018336)	DMGDH (ENSRFEG00010018532) #21	BHMT2 (ENSRFEG00010018710) #22	BHMT (ENSRFEG00010018771) #23	JMY (ENSRFEG00010018821) #27	HOMER1 (ENSRFEG00010018881) #29	TENT2 (ENSRFEG00010019113)	CMYA5 (ENSRFEG00010019210) #31	MTX3 (ENSRFEG00010019245) #32	THBS4 (ENSRFEG00010019289) #34	SERINC5 (ENSRFEG00010019347) #36	SPZ1 (ENSRFEG00010019387)	ZFYVE16 (ENSRFEG00010019402) #37	FAM151B (ENSRFEG00010019442)	ANKRD34B (ENSRFEG00010019460)	ENSRFEG00010019476	MSH3 (ENSRFEG00010019541)	ENSRFEG00010019598	RASGRF2 (ENSRFEG00010019626)
Megabat	MODERN SPECIES	578														DMGDH (ENSPVAG00000000621) #21	BHMT2 (ENSPVAG00000000622) #22	BHMT (ENSPVAG00000000624) #23	JMY (ENSPVAG00000000625) #27
Eulipotyphla	ANCESTRAL SPECIES	257													ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23
Hedgehog	MODERN SPECIES	4246																BHMT (ENSEEUG00000011942) #23
Common shrew	MODERN SPECIES	1026													ENSSARG00000010368	DMGDH (ENSSARG00000010376) #21	BHMT2 (ENSSARG00000010400) #22	BHMT (ENSSARG00000010410) #23
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Primates	ANCESTRAL SPECIES	8	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.f #14	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.u	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT00950000183076.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.e #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.u	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Coquerels sifaka	MODERN SPECIES	999	F2RL1 (ENSPCOG00000015685)	S100Z (ENSPCOG00000005734)	CRHBP (ENSPCOG00000026267)	AGGF1 (ENSPCOG00000026723) #7	PDE8B (ENSPCOG00000017117) #9	WDR41 (ENSPCOG00000019741) #10	OTP (ENSPCOG00000028773) #11	TBCA (ENSPCOG00000005770) #14	ENSPCOG00000012906	ENSPCOG00000004066 #17	SCAMP1 (ENSPCOG00000022266) #18	LHFPL2 (ENSPCOG00000006098) #19	ARSB (ENSPCOG00000024261)	DMGDH (ENSPCOG00000014759) #21	BHMT2 (ENSPCOG00000027821) #22	BHMT (ENSPCOG00000000488) #23	JMY (ENSPCOG00000019253) #27	HOMER1 (ENSPCOG00000026991) #29	TENT2 (ENSPCOG00000000920)	CMYA5 (ENSPCOG00000025300) #31	MTX3 (ENSPCOG00000024492) #32	THBS4 (ENSPCOG00000026127) #34	ENSPCOG00000004503	SERINC5 (ENSPCOG00000020769) #36	ZFYVE16 (ENSPCOG00000023188) #37	FAM151B (ENSPCOG00000024049)	ENSPCOG00000024489	ENSPCOG00000020321	MSH3 (ENSPCOG00000020396)	RASGRF2 (ENSPCOG00000014453)	CKMT2 (ENSPCOG00000008586)
Greater bamboo lemur	MODERN SPECIES	488		F2RL1 (ENSPSMG00000021725)	S100Z (ENSPSMG00000021731)	CRHBP (ENSPSMG00000021746)	AGGF1 (ENSPSMG00000021774) #7	PDE8B (ENSPSMG00000022043) #9	WDR41 (ENSPSMG00000022198) #10	OTP (ENSPSMG00000022216) #11	TBCA (ENSPSMG00000022229) #14	AP3B1 (ENSPSMG00000022301) #17	SCAMP1 (ENSPSMG00000022346) #18	LHFPL2 (ENSPSMG00000022352) #19	ARSB (ENSPSMG00000022382)	DMGDH (ENSPSMG00000022423) #21	BHMT2 (ENSPSMG00000022458) #22	BHMT (ENSPSMG00000022496) #23	ENSPSMG00000022516	JMY (ENSPSMG00000022524) #27	HOMER1 (ENSPSMG00000022599) #29	TENT2 (ENSPSMG00000022674)	CMYA5 (ENSPSMG00000022711) #31	MTX3 (ENSPSMG00000022719) #32	THBS4 (ENSPSMG00000022760) #34	SERINC5 (ENSPSMG00000022792) #36	SPZ1 (ENSPSMG00000022808)	ZFYVE16 (ENSPSMG00000022828) #37	FAM151B (ENSPSMG00000022843)	ANKRD34B (ENSPSMG00000022855)	ENSPSMG00000022882	MSH3 (ENSPSMG00000022936)	ENSPSMG00000022949
Mouse lemur	MODERN SPECIES	3	PRRC1 (ENSMICG00000009016)	CCDC192 (ENSMICG00000043066)	SLC12A2 (ENSMICG00000013234)	FBN2 (ENSMICG00000001587)	SLC27A6 (ENSMICG00000047567)	ISOC1 (ENSMICG00000003279)	ADAMTS19 (ENSMICG00000009660)	MINAR2 (ENSMICG00000027569)	CHSY3 (ENSMICG00000030934)	AP3B1 (ENSMICG00000011403) #17	SCAMP1 (ENSMICG00000011421) #18	LHFPL2 (ENSMICG00000002076) #19	ARSB (ENSMICG00000044223)	DMGDH (ENSMICG00000005462) #21	BHMT2 (ENSMICG00000005482) #22	BHMT (ENSMICG00000005487) #23	JMY (ENSMICG00000032384) #27	HOMER1 (ENSMICG00000012592) #29	TENT2 (ENSMICG00000038412)	CMYA5 (ENSMICG00000017061) #31	MTX3 (ENSMICG00000017066) #32	THBS4 (ENSMICG00000017069) #34	SERINC5 (ENSMICG00000017075) #36	ENSMICG00000016986	ZFYVE16 (ENSMICG00000002405) #37	FAM151B (ENSMICG00000002412)	ENSMICG00000027047	MSH3 (ENSMICG00000016187)	ENSMICG00000036427	RASGRF2 (ENSMICG00000016229)	CKMT2 (ENSMICG00000016259)
Bushbaby	MODERN SPECIES	132	S100Z (ENSOGAG00000027239)	CRHBP (ENSOGAG00000003437)	AGGF1 (ENSOGAG00000003439) #7	ZBED3 (ENSOGAG00000033172) #8	PDE8B (ENSOGAG00000006930) #9	WDR41 (ENSOGAG00000006937) #10	OTP (ENSOGAG00000010197) #11	TBCA (ENSOGAG00000010198) #14	ENSOGAG00000026363	AP3B1 (ENSOGAG00000002145) #17	SCAMP1 (ENSOGAG00000014059) #18	LHFPL2 (ENSOGAG00000024907) #19	ARSB (ENSOGAG00000008620)	DMGDH (ENSOGAG00000008622) #21	BHMT2 (ENSOGAG00000008629) #22	BHMT (ENSOGAG00000006820) #23	JMY (ENSOGAG00000002137) #27	HOMER1 (ENSOGAG00000012453) #29	TENT2 (ENSOGAG00000012456)	CMYA5 (ENSOGAG00000012460) #31	MTX3 (ENSOGAG00000012479) #32	THBS4 (ENSOGAG00000015172) #34	ENSOGAG00000015178 #36	ENSOGAG00000028918	ENSOGAG00000005004	FAM151B (ENSOGAG00000005006)	ANKRD34B (ENSOGAG00000003348)	ENSOGAG00000025320	MSH3 (ENSOGAG00000011410)	RASGRF2 (ENSOGAG00000002537)	CKMT2 (ENSOGAG00000002541)
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Gorilla	MODERN SPECIES	8	ZBED3 (ENSGGOG00000002896) #8	ENSGGOG00000037102	ENSGGOG00000039702	PDE8B (ENSGGOG00000005317) #9	WDR41 (ENSGGOG00000026798) #10	ENSGGOG00000027406	OTP (ENSGGOG00000015687) #11	ENSGGOG00000023547 #14	ENSGGOG00000027597	AP3B1 (ENSGGOG00000001771) #17	SCAMP1 (ENSGGOG00000015191) #18	LHFPL2 (ENSGGOG00000003771) #19	ARSB (ENSGGOG00000010450)	DMGDH (ENSGGOG00000003203) #21	BHMT2 (ENSGGOG00000003210) #22	BHMT (ENSGGOG00000007558) #23	JMY (ENSGGOG00000008560) #27	ENSGGOG00000043244 #28	HOMER1 (ENSGGOG00000000986) #29	TENT2 (ENSGGOG00000023154)	CMYA5 (ENSGGOG00000006288) #31	MTX3 (ENSGGOG00000003916) #32	THBS4 (ENSGGOG00000027002) #34	SERINC5 (ENSGGOG00000016060) #36	ENSGGOG00000016146	ZFYVE16 (ENSGGOG00000000411) #37	FAM151B (ENSGGOG00000016422)	ANKRD34B (ENSGGOG00000040274)	ENSGGOG00000027943	ENSGGOG00000042760	TEKT3 (ENSGGOG00000003151)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Human	MODERN SPECIES	17	S100Z (ENSG00000171643)	CRHBP (ENSG00000145708)	AGGF1 (ENSG00000164252) #7	ZBED3 (ENSG00000132846) #8	ENSG00000284762	PDE8B (ENSG00000113231) #9	WDR41 (ENSG00000164253) #10	OTP (ENSG00000171540) #11	TBCA (ENSG00000171530) #14	AP3B1 (ENSG00000132842) #17	SCAMP1 (ENSG00000085365) #18	LHFPL2 (ENSG00000145685) #19	ARSB (ENSG00000113273)	DMGDH (ENSG00000132837) #21	BHMT2 (ENSG00000132840) #22	BHMT (ENSG00000145692) #23	JMY (ENSG00000152409) #27	HOMER1 (ENSG00000152413) #29	TENT2 (ENSG00000164329)	CMYA5 (ENSG00000164309) #31	MTX3 (ENSG00000177034) #32	THBS4 (ENSG00000113296) #34	SERINC5 (ENSG00000164300) #36	SPZ1 (ENSG00000164299)	ZFYVE16 (ENSG00000039319) #37	FAM151B (ENSG00000152380)	ANKRD34B (ENSG00000189127)	DHFR (ENSG00000228716)	MSH3 (ENSG00000113318)	RASGRF2 (ENSG00000113319)	CKMT2 (ENSG00000131730)
Pan	ANCESTRAL SPECIES	21	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000154938.f.b	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00950000182878.b.a.c.a.a.b.i.b	ENSGT00940000159952 #11	ENSGT00390000009710.p.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00390000012207.i.a	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a
Bonobo	MODERN SPECIES	18	CRHBP (ENSPPAG00000041280)	AGGF1 (ENSPPAG00000035969) #7	ENSPPAG00000015926	ENSPPAG00000042326	PDE8B (ENSPPAG00000037153) #9	ENSPPAG00000035224	WDR41 (ENSPPAG00000036126) #10	OTP (ENSPPAG00000042915) #11	TBCA (ENSPPAG00000037014) #14	ENSPPAG00000044127	AP3B1 (ENSPPAG00000038854) #17	SCAMP1 (ENSPPAG00000037862) #18	LHFPL2 (ENSPPAG00000036923) #19	ARSB (ENSPPAG00000040516)	DMGDH (ENSPPAG00000022080) #21	BHMT (ENSPPAG00000035095) #23	JMY (ENSPPAG00000037761) #27	ENSPPAG00000017260 #28	HOMER1 (ENSPPAG00000032101) #29	TENT2 (ENSPPAG00000035817)	CMYA5 (ENSPPAG00000036589) #31	MTX3 (ENSPPAG00000041435) #32	THBS4 (ENSPPAG00000034900) #34	SERINC5 (ENSPPAG00000039931) #36	SPZ1 (ENSPPAG00000035315)	ENSPPAG00000028959	ENSPPAG00000031592	ZFYVE16 (ENSPPAG00000039709) #37	ENSPPAG00000037730	FAM151B (ENSPPAG00000038755)	ANKRD34B (ENSPPAG00000013994)
Chimpanzee	MODERN SPECIES	18	CRHBP (ENSPTRG00000017007)	AGGF1 (ENSPTRG00000017008) #7	ZBED3 (ENSPTRG00000050050) #8	ENSPTRG00000046179	ENSPTRG00000042930	PDE8B (ENSPTRG00000017010) #9	WDR41 (ENSPTRG00000017011) #10	ENSPTRG00000023613	OTP (ENSPTRG00000017012) #11	TBCA (ENSPTRG00000017013) #14	AP3B1 (ENSPTRG00000017015) #17	SCAMP1 (ENSPTRG00000047664) #18	LHFPL2 (ENSPTRG00000045309) #19	ARSB (ENSPTRG00000017019)	DMGDH (ENSPTRG00000017020) #21	BHMT2 (ENSPTRG00000017022) #23	ENSPTRG00000043319	JMY (ENSPTRG00000017025) #27	ENSPTRG00000048128 #28	HOMER1 (ENSPTRG00000017026) #29	TENT2 (ENSPTRG00000017028)	CMYA5 (ENSPTRG00000023686) #31	ENSPTRG00000039087	MTX3 (ENSPTRG00000051488) #32	THBS4 (ENSPTRG00000017031) #34	SERINC5 (ENSPTRG00000017032) #36	ENSPTRG00000042769	ENSPTRG00000040617	ZFYVE16 (ENSPTRG00000017038) #37	ENSPTRG00000051397	FAM151B (ENSPTRG00000017039)
Orangutan	MODERN SPECIES	18	CRHBP (ENSPPYG00000015573)	AGGF1 (ENSPPYG00000015574) #7	ZBED3 (ENSPPYG00000015575) #8	PDE8B (ENSPPYG00000015576) #9	ENSPPYG00000030861	WDR41 (ENSPPYG00000015577) #10	OTP (ENSPPYG00000015578) #11	TBCA (ENSPPYG00000015579) #14	ENSPPYG00000040806	AP3B1 (ENSPPYG00000015580) #17	SCAMP1 (ENSPPYG00000015581) #18	LHFPL2 (ENSPPYG00000015582) #19	ARSB (ENSPPYG00000015583)	DMGDH (ENSPPYG00000015584) #21	BHMT2 (ENSPPYG00000015585) #22	BHMT (ENSPPYG00000015586) #23	JMY (ENSPPYG00000015588) #27	HOMER1 (ENSPPYG00000015589) #29	ENSPPYG00000011137 #28	TENT2 (ENSPPYG00000015590)	CMYA5 (ENSPPYG00000015591) #31	MTX3 (ENSPPYG00000015592) #32	THBS4 (ENSPPYG00000015593) #34	SERINC5 (ENSPPYG00000015594) #36	SPZ1 (ENSPPYG00000015595)	ENSPPYG00000037278	ENSPPYG00000015596	ZFYVE16 (ENSPPYG00000015597) #37	FAM151B (ENSPPYG00000015598)	ANKRD34B (ENSPPYG00000015599)	DHFR (ENSPPYG00000036301)
Gibbon	MODERN SPECIES	11	CRHBP (ENSNLEG00000012627)	AGGF1 (ENSNLEG00000026907) #7	PDE8B (ENSNLEG00000012655) #9	ENSNLEG00000028936	WDR41 (ENSNLEG00000012712) #10	OTP (ENSNLEG00000012728) #11	TBCA (ENSNLEG00000012734) #14	ENSNLEG00000012739	AP3B1 (ENSNLEG00000012740) #17	SCAMP1 (ENSNLEG00000029924) #18	LHFPL2 (ENSNLEG00000035509) #19	ENSNLEG00000018637	ARSB (ENSNLEG00000012786)	DMGDH (ENSNLEG00000012801) #21	BHMT2 (ENSNLEG00000012819) #22	BHMT (ENSNLEG00000012840) #23	JMY (ENSNLEG00000012852) #27	HOMER1 (ENSNLEG00000012860) #29	TENT2 (ENSNLEG00000027224)	CMYA5 (ENSNLEG00000012895) #31	ENSNLEG00000012915 #32	THBS4 (ENSNLEG00000012916) #34	SERINC5 (ENSNLEG00000012931) #36	ENSNLEG00000012943	SPZ1 (ENSNLEG00000018597)	ENSNLEG00000033746	ENSNLEG00000018598	ZFYVE16 (ENSNLEG00000012945) #37	ENSNLEG00000034030	FAM151B (ENSNLEG00000012975)	ENSNLEG00000012989
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00390000007084.c.a.d.d #28	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00390000009710.k.a #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00910000148532
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00390000009710.k.a #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00900000143509	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00390000009710.k.a #14	ENSGT00940000157603 #17	ENSGT00940000161627.a.a.a.a.a.a.a.b	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00910000144152.b.b.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.c
Crab-eating macaque	MODERN SPECIES	16	AGGF1 (ENSMFAG00000038062) #7	ZBED3 (ENSMFAG00000065084) #8	ENSMFAG00000063877	PDE8B (ENSMFAG00000041903) #9	ENSMFAG00000040282	WDR41 (ENSMFAG00000002206) #10	OTP (ENSMFAG00000056050) #11	TBCA (ENSMFAG00000034059) #14	ENSMFAG00000057074	AP3B1 (ENSMFAG00000040032) #17	ENSMFAG00000056484	SCAMP1 (ENSMFAG00000037897) #18	LHFPL2 (ENSMFAG00000036894) #19	ARSB (ENSMFAG00000038907)	DMGDH (ENSMFAG00000024245) #21	BHMT (ENSMFAG00000030260) #23	ENSMFAG00000047248	JMY (ENSMFAG00000044839) #27	ENSMFAG00000032864	HOMER1 (ENSMFAG00000001337) #29	TENT2 (ENSMFAG00000039561)	CMYA5 (ENSMFAG00000000649) #31	MTX3 (ENSMFAG00000003503) #32	THBS4 (ENSMFAG00000033394) #34	SERINC5 (ENSMFAG00000046004) #36	ENSMFAG00000050168 ##24	ENSMFAG00000024381	ZFYVE16 (ENSMFAG00000039223) #37	FAM151B (ENSMFAG00000042443)	ENSMFAG00000061609	ANKRD34B (ENSMFAG00000028493)
Rhesus	MODERN SPECIES	16	F2R (ENSMMUG00000039522)	F2RL1 (ENSMMUG00000060389)	ENSMMUG00000050110	CRHBP (ENSMMUG00000021354)	AGGF1 (ENSMMUG00000021358) #9	ZBED3 (ENSMMUG00000021357) #8	WDR41 (ENSMMUG00000021361) #10	OTP (ENSMMUG00000039760) #11	ENSMMUG00000053817 #14	AP3B1 (ENSMMUG00000001360) #17	ENSMMUG00000057268	SCAMP1 (ENSMMUG00000039925) #18	LHFPL2 (ENSMMUG00000016402) #19	ARSB (ENSMMUG00000006792)	DMGDH (ENSMMUG00000006795) #21	BHMT2 (ENSMMUG00000006796) #23	JMY (ENSMMUG00000046325) #27	ENSMMUG00000029973	ENSMMUG00000060083 ##16	ENSMMUG00000054810 ##20	HOMER1 (ENSMMUG00000017057) #29	TENT2 (ENSMMUG00000020731)	CMYA5 (ENSMMUG00000020733) #31	MTX3 (ENSMMUG00000021104) #32	THBS4 (ENSMMUG00000003143) #34	SERINC5 (ENSMMUG00000023533) #36	ENSMMUG00000065072	ENSMMUG00000020845	ZFYVE16 (ENSMMUG00000023177) #37	FAM151B (ENSMMUG00000019459)	ENSMMUG00000062289
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.c.e.a	ENSGT00550000074949
Olive baboon	MODERN SPECIES	15	ENSPANG00000037268	F2RL1 (ENSPANG00000003861)	CRHBP (ENSPANG00000010788)	AGGF1 (ENSPANG00000026423) #7	ZBED3 (ENSPANG00000038596) #8	PDE8B (ENSPANG00000025090) #9	WDR41 (ENSPANG00000011629) #10	OTP (ENSPANG00000009550) #11	TBCA (ENSPANG00000021931) #14	AP3B1 (ENSPANG00000023495) #17	ENSPANG00000050549 ##20	SCAMP1 (ENSPANG00000004375) #18	LHFPL2 (ENSPANG00000006610) #19	ARSB (ENSPANG00000023320)	DMGDH (ENSPANG00000016060) #21	BHMT (ENSPANG00000010787) #23	JMY (ENSPANG00000008952) #27	ENSPANG00000042329	HOMER1 (ENSPANG00000029433) #29	TENT2 (ENSPANG00000017932)	CMYA5 (ENSPANG00000006609) #31	MTX3 (ENSPANG00000017204) #32	THBS4 (ENSPANG00000001778) #34	SERINC5 (ENSPANG00000015316) #36	ENSPANG00000047023 ##26	ENSPANG00000046950	ENSPANG00000006608	ENSPANG00000009347	FAM151B (ENSPANG00000006073)	ANKRD34B (ENSPANG00000021025)	ENSPANG00000007428
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT01050000244840.A.a.a	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.l #14	ENSGT01050000246247	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00910000148532	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.c.e.a	ENSGT00550000074949
Drill	MODERN SPECIES	1083											SCAMP1 (ENSMLEG00000035674) #18	LHFPL2 (ENSMLEG00000006092) #19	ARSB (ENSMLEG00000039119)	DMGDH (ENSMLEG00000031952) #21	BHMT2 (ENSMLEG00000037432) #22	BHMT (ENSMLEG00000029882) #23	JMY (ENSMLEG00000028808) #27	ENSMLEG00000010309	ENSMLEG00000033033	HOMER1 (ENSMLEG00000031491) #29	TENT2 (ENSMLEG00000015829)	CMYA5 (ENSMLEG00000029723) #31	MTX3 (ENSMLEG00000032301) #32	THBS4 (ENSMLEG00000041362) #34	SERINC5 (ENSMLEG00000029957) #36
Sooty mangabey	MODERN SPECIES	296	F2RL1 (ENSCATG00000032504)	CRHBP (ENSCATG00000033058)	AGGF1 (ENSCATG00000041518) #7	ENSCATG00000030461	PDE8B (ENSCATG00000037786) #9	WDR41 (ENSCATG00000041825) #10	OTP (ENSCATG00000032638) #11	ENSCATG00000034024 #14	ENSCATG00000017219	AP3B1 (ENSCATG00000038017) #17	SCAMP1 (ENSCATG00000044496) #18	LHFPL2 (ENSCATG00000035958) #19	ARSB (ENSCATG00000016836)	DMGDH (ENSCATG00000043134) #21	BHMT2 (ENSCATG00000041810) #22	BHMT (ENSCATG00000018459) #23	ENSCATG00000017079	JMY (ENSCATG00000031558) #27	HOMER1 (ENSCATG00000041074) #29	TENT2 (ENSCATG00000038522)	CMYA5 (ENSCATG00000030915) #31	MTX3 (ENSCATG00000043566) #32	THBS4 (ENSCATG00000032042) #34	SERINC5 (ENSCATG00000043970) #36	ENSCATG00000030668	ENSCATG00000044681	FAM151B (ENSCATG00000040732)	ENSCATG00000015204	ANKRD34B (ENSCATG00000015570)	ENSCATG00000042395	MSH3 (ENSCATG00000033755)
Vervet Monkey	MODERN SPECIES	23	CRHBP (ENSCSAG00000015337)	ENSCSAG00000015331	AGGF1 (ENSCSAG00000015324) #7	ZBED3 (ENSCSAG00000019417) #8	PDE8B (ENSCSAG00000015317) #9	WDR41 (ENSCSAG00000015310) #10	OTP (ENSCSAG00000015302) #11	ENSCSAG00000015299	AP3B1 (ENSCSAG00000015290) #17	SCAMP1 (ENSCSAG00000015275) #18	ENSCSAG00000019418	LHFPL2 (ENSCSAG00000015267) #19	ARSB (ENSCSAG00000015262)	DMGDH (ENSCSAG00000015255) #21	BHMT2 (ENSCSAG00000015246) #22	BHMT (ENSCSAG00000015241) #23	JMY (ENSCSAG00000015236) #27	HOMER1 (ENSCSAG00000015226) #29	ENSCSAG00000019419 #28	TENT2 (ENSCSAG00000015221)	ENSCSAG00000015214	CMYA5 (ENSCSAG00000015197) #31	MTX3 (ENSCSAG00000015189) #32	THBS4 (ENSCSAG00000015181) #34	SERINC5 (ENSCSAG00000015170) #36	SPZ1 (ENSCSAG00000019420)	ZFYVE16 (ENSCSAG00000015157) #37	FAM151B (ENSCSAG00000015145)	ANKRD34B (ENSCSAG00000019421)	DHFR (ENSCSAG00000015136)	MSH3 (ENSCSAG00000015082)
Rhinopithecus	ANCESTRAL SPECIES	211													ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00390000006721.j	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00890000139472.b	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.a.a.b.a
Golden snub-nosed monkey	MODERN SPECIES	1126													ARSB (ENSRROG00000032497)	DMGDH (ENSRROG00000037133) #21	BHMT2 (ENSRROG00000039156) #22	BHMT (ENSRROG00000027828) #23	JMY (ENSRROG00000031443) #27	ENSRROG00000034090	HOMER1 (ENSRROG00000029491) #29
Black snub-nosed monkey	MODERN SPECIES	353													ARSB (ENSRBIG00000043089)	DMGDH (ENSRBIG00000040935) #21	BHMT2 (ENSRBIG00000034295) #22	BHMT (ENSRBIG00000044465) #23	JMY (ENSRBIG00000044251) #27	HOMER1 (ENSRBIG00000026863) #29	TENT2 (ENSRBIG00000028874)	CMYA5 (ENSRBIG00000029005) #31	MTX3 (ENSRBIG00000032362) #32	THBS4 (ENSRBIG00000031443) #34	SERINC5 (ENSRBIG00000030587) #36	SPZ1 (ENSRBIG00000034721)	ENSRBIG00000037215	ENSRBIG00000039434	FAM151B (ENSRBIG00000029388)	ANKRD34B (ENSRBIG00000041216)	ENSRBIG00000040129	MSH3 (ENSRBIG00000005363)	ENSRBIG00000043367
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.a	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Cebidae	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.b	ENSGT00390000010283.`b.a.b.a	ENSGT00550000074949
Marmoset	MODERN SPECIES	11	ZBED3 (ENSCJAG00000019950) #8	PDE8B (ENSCJAG00000019876) #9	WDR41 (ENSCJAG00000019853) #10	OTP (ENSCJAG00000071567) #11	ENSCJAG00000085518 #12	ENSCJAG00000072122 #13	ENSCJAG00000019848 #14	ENSCJAG00000071117 #15	ENSCJAG00000085539 #16	AP3B1 (ENSCJAG00000019804) #17	SCAMP1 (ENSCJAG00000019794) #18	LHFPL2 (ENSCJAG00000085814) #19	ENSCJAG00000081984 #20	DMGDH (ENSCJAG00000019768) #21	BHMT2 (ENSCJAG00000019766) #22	BHMT (ENSCJAG00000059013) #23	ENSCJAG00000080099 #24	ENSCJAG00000084621 #25	ENSCJAG00000079194 #26	JMY (ENSCJAG00000019743) #27	ENSCJAG00000077110 #28	HOMER1 (ENSCJAG00000019722) #29	ENSCJAG00000076921 #30	CMYA5 (ENSCJAG00000019709) #31	MTX3 (ENSCJAG00000019700) #32	ENSCJAG00000075688 #33	THBS4 (ENSCJAG00000019641) #34	ENSCJAG00000076770 #35	SERINC5 (ENSCJAG00000019619) #36	ZFYVE16 (ENSCJAG00000019584) #37	ENSCJAG00000077855
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00940000161125	ENSGT00510000047029.z.e	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00900000143509	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.i.b #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000156300.d.k.b	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000163574 #37	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283.`b.a.b.b	ENSGT00550000074949	ENSGT00940000155679
Bolivian squirrel monkey	MODERN SPECIES	43	CRHBP (ENSSBOG00000024077)	AGGF1 (ENSSBOG00000019539) #7	ENSSBOG00000032840	PDE8B (ENSSBOG00000020456) #9	WDR41 (ENSSBOG00000019142) #10	ENSSBOG00000021924	OTP (ENSSBOG00000035833) #11	TBCA (ENSSBOG00000031001) #14	AP3B1 (ENSSBOG00000029511) #17	ENSSBOG00000034436	SCAMP1 (ENSSBOG00000029488) #18	LHFPL2 (ENSSBOG00000033083) #19	ARSB (ENSSBOG00000031483)	ENSSBOG00000011617	DMGDH (ENSSBOG00000035140) #21	BHMT (ENSSBOG00000030724) #23	JMY (ENSSBOG00000001249) #27	ENSSBOG00000022728	HOMER1 (ENSSBOG00000030696) #29	TENT2 (ENSSBOG00000025595)	CMYA5 (ENSSBOG00000035707) #31	MTX3 (ENSSBOG00000030765) #32	THBS4 (ENSSBOG00000024309) #34	SERINC5 (ENSSBOG00000029391) #36	ZFYVE16 (ENSSBOG00000035944) #37	FAM151B (ENSSBOG00000027276)	ENSSBOG00000034508	ENSSBOG00000028670	MSH3 (ENSSBOG00000034934)	RASGRF2 (ENSSBOG00000032635)	CKMT2 (ENSSBOG00000022835)
Capuchin	MODERN SPECIES	50	AGGF1 (ENSCCAG00000023174) #7	PDE8B (ENSCCAG00000035315) #9	ENSCCAG00000024360 #10	ENSCCAG00000033428	OTP (ENSCCAG00000028580) #11	TBCA (ENSCCAG00000034960) ##14	ENSCCAG00000036687	AP3B1 (ENSCCAG00000024221) #17	ENSCCAG00000001996	SCAMP1 (ENSCCAG00000020394) #18	LHFPL2 (ENSCCAG00000034151) #19	ARSB (ENSCCAG00000026253)	DMGDH (ENSCCAG00000029570) #21	ENSCCAG00000025862	BHMT2 (ENSCCAG00000025343) #22	BHMT (ENSCCAG00000001311) #23	JMY (ENSCCAG00000020292) #27
Mas night monkey	MODERN SPECIES	670	S100Z (ENSANAG00000027821)	ENSANAG00000028007	CRHBP (ENSANAG00000022343)	AGGF1 (ENSANAG00000023021) #7	PDE8B (ENSANAG00000031594) #9	WDR41 (ENSANAG00000004152) #10	OTP (ENSANAG00000029433) #11	ENSANAG00000035527 #14	AP3B1 (ENSANAG00000035703) #17	ENSANAG00000036326	SCAMP1 (ENSANAG00000023081) #18	LHFPL2 (ENSANAG00000021404) #19	ARSB (ENSANAG00000028965)	ENSANAG00000019436	DMGDH (ENSANAG00000019881) #21	BHMT (ENSANAG00000023575) #23	ENSANAG00000019851	JMY (ENSANAG00000022714) #27	ENSANAG00000032876	HOMER1 (ENSANAG00000035206) #29	TENT2 (ENSANAG00000023910)	CMYA5 (ENSANAG00000027112) #31	ENSANAG00000027590	MTX3 (ENSANAG00000022724) #32	ENSANAG00000027562	THBS4 (ENSANAG00000029945) #34	SERINC5 (ENSANAG00000024787) #36
Tarsier	MODERN SPECIES	867																BHMT (ENSTSYG00000003340) #23
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Tree shrew	MODERN SPECIES	1466															DMGDH (ENSTBEG00000008994) #21	BHMT (ENSTBEG00000000885) #23
Glires	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Lagomorpha	ANCESTRAL SPECIES	525															ENSGT00940000158176 #21	ENSGT00390000003122.c.a #23
Pika	MODERN SPECIES	1180															ENSOPRG00000001578 #21	BHMT (ENSOPRG00000001607) #23	ENSOPRG00000001621 #22
Rodentia	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Myomorpha	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Muroidea	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Murinae	ANCESTRAL SPECIES	24	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Mus	ANCESTRAL SPECIES	22	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Mus_C	DUPLICATION
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00900000143364	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
spretus	MODERN SPECIES	4	S100z (MGP_SPRETEiJ_G0019680)	Crhbp (MGP_SPRETEiJ_G0019679)	Aggf1 (MGP_SPRETEiJ_G0019678) #7	Zbed3 (MGP_SPRETEiJ_G0019677) #8	Pde8b (MGP_SPRETEiJ_G0019676) #9	MGP_SPRETEiJ_G0019675 #10	Otp (MGP_SPRETEiJ_G0019674) #11	Tbca (MGP_SPRETEiJ_G0019673) #14	Ap3b1 (MGP_SPRETEiJ_G0019672) #17	MGP_SPRETEiJ_G0019671	Scamp1 (MGP_SPRETEiJ_G0019670) #18	Lhfpl2 (MGP_SPRETEiJ_G0019669) #19	Arsb (MGP_SPRETEiJ_G0019668)	Dmgdh (MGP_SPRETEiJ_G0019667) #21	Bhmt2 (MGP_SPRETEiJ_G0019666) #22	MGP_SPRETEiJ_G0019665 #23	Jmy (MGP_SPRETEiJ_G0019664) #27	Homer1 (MGP_SPRETEiJ_G0019663) #29	Tent2 (MGP_SPRETEiJ_G0019662)	Cmya5 (MGP_SPRETEiJ_G0019661) #31	Mtx3 (MGP_SPRETEiJ_G0019660) #32	Thbs4 (MGP_SPRETEiJ_G0019659) #34	Serinc5 (MGP_SPRETEiJ_G0019658) #36	Spz1 (MGP_SPRETEiJ_G0019657)	Zfyve16 (MGP_SPRETEiJ_G0019656)	Fam151b (MGP_SPRETEiJ_G0019655)	Ankrd34b (MGP_SPRETEiJ_G0019654)	Dhfr (MGP_SPRETEiJ_G0019653)	MGP_SPRETEiJ_G0019652	Msh3 (MGP_SPRETEiJ_G0019651)	Rasgrf2 (MGP_SPRETEiJ_G0019650)
Steppe mouse	MODERN SPECIES	1985																ENSMSIG00000001027 #23
Mus_C	ANCESTRAL SPECIES	16	ENSGT00390000014772	ENSGT00940000156787	ENSGT00940000160839	ENSGT00950000183051.a.a	ENSGT00920000149172	ENSGT00940000156446	ENSGT00940000160484	ENSGT00940000156500.c	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00390000003122.c.a.b #23	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00930000151022.d	ENSGT00940000153805.q.b.a.a.a.b.b.b.a.b.b.a
spretus	MODERN SPECIES	9	Galr1 (MGP_SPRETEiJ_G0023358)	Mbp (MGP_SPRETEiJ_G0023359)	Zfp236 (MGP_SPRETEiJ_G0023360)	Zfp516 (MGP_SPRETEiJ_G0023361)	Tshz1 (MGP_SPRETEiJ_G0023362)	Zadh2 (MGP_SPRETEiJ_G0023363)	Zfp407 (MGP_SPRETEiJ_G0023364)	Cndp1 (MGP_SPRETEiJ_G0023365)	Cndp2 (MGP_SPRETEiJ_G0023366)	MGP_SPRETEiJ_G0023367	Cyb5a (MGP_SPRETEiJ_G0023368)	Fbxo15 (MGP_SPRETEiJ_G0023369)	Timm21 (MGP_SPRETEiJ_G0023370)	Neto1 (MGP_SPRETEiJ_G0023371)	Cbln2 (MGP_SPRETEiJ_G0023372)	MGP_SPRETEiJ_G0023373 #23	MGP_SPRETEiJ_G0023374	Rttn (MGP_SPRETEiJ_G0023375)	Cd226 (MGP_SPRETEiJ_G0023376)	Dok6 (MGP_SPRETEiJ_G0023377)	Tmx3 (MGP_SPRETEiJ_G0023378)	Gm45871 (MGP_SPRETEiJ_G0023379)
Mouse	DUPLICATION
Mouse	MODERN SPECIES	9	Mbp (ENSMUSG00000041607)	Zfp236 (ENSMUSG00000041258)	Zfp516 (ENSMUSG00000058881)	Tshz1 (ENSMUSG00000046982)	Zadh2 (ENSMUSG00000049090)	Zfp407 (ENSMUSG00000048410)	Cndp1 (ENSMUSG00000056162)	Cndp2 (ENSMUSG00000024644)	Dipk1c (ENSMUSG00000047992)	Gm17266 (ENSMUSG00000117781)	Cyb5a (ENSMUSG00000024646)	Fbxo15 (ENSMUSG00000034391)	Timm21 (ENSMUSG00000024645)	Neto1 (ENSMUSG00000050321)	Cbln2 (ENSMUSG00000024647)	Bhmt1b (ENSMUSG00000069324) #23	Socs6 (ENSMUSG00000056153)	Rttn (ENSMUSG00000023066)	Cd226 (ENSMUSG00000034028)	Dok6 (ENSMUSG00000073514)	Tmx3 (ENSMUSG00000024614)	Gm45871 (ENSMUSG00000110277)
Mouse	MODERN SPECIES	4	F2rl1 (ENSMUSG00000021678)	S100z (ENSMUSG00000021679)	Crhbp (ENSMUSG00000021680)	Aggf1 (ENSMUSG00000021681) #7	Zbed3 (ENSMUSG00000041995) #8	Pde8b (ENSMUSG00000021684) #9	Wdr41 (ENSMUSG00000042015) #10	Otp (ENSMUSG00000021685) #11	Tbca (ENSMUSG00000042043) #14	Ap3b1 (ENSMUSG00000021686) #17	Scamp1 (ENSMUSG00000021687) #18	Lhfpl2 (ENSMUSG00000045312) #19	Arsb (ENSMUSG00000042082)	Dmgdh (ENSMUSG00000042102) #21	Bhmt2 (ENSMUSG00000042118) #22	Bhmt (ENSMUSG00000074768) #23	Jmy (ENSMUSG00000021690) #27	Homer1 (ENSMUSG00000007617) #29	Tent2 (ENSMUSG00000042167)	Cmya5 (ENSMUSG00000047419) #31	Mtx3 (ENSMUSG00000021704) #32	Thbs4 (ENSMUSG00000021702) #34	Serinc5 (ENSMUSG00000021703) #36	Spz1 (ENSMUSG00000046957)	Zfyve16 (ENSMUSG00000021706)	Fam151b (ENSMUSG00000034334)	Ankrd34b (ENSMUSG00000045034)	Dhfr (ENSMUSG00000021707)	Gm20379 (ENSMUSG00000100622)	Msh3 (ENSMUSG00000014850)	Rasgrf2 (ENSMUSG00000021708)
Ryukyu mouse	MODERN SPECIES	4	Aggf1 (MGP_CAROLIEiJ_G0018795) #7	Zbed3 (MGP_CAROLIEiJ_G0018794) #8	Pde8b (MGP_CAROLIEiJ_G0018793) #9	MGP_CAROLIEiJ_G0018792 #10	Otp (MGP_CAROLIEiJ_G0018791) #11	Tbca (MGP_CAROLIEiJ_G0018790) #14	Ap3b1 (MGP_CAROLIEiJ_G0018789) #17	MGP_CAROLIEiJ_G0018788	Scamp1 (MGP_CAROLIEiJ_G0018787) #18	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #19	MGP_CAROLIEiJ_G0018785	Arsb (MGP_CAROLIEiJ_G0018784)	MGP_CAROLIEiJ_G0018783	Dmgdh (MGP_CAROLIEiJ_G0018782) #21	Bhmt2 (MGP_CAROLIEiJ_G0018781) #22	MGP_CAROLIEiJ_G0018780 #23	Jmy (MGP_CAROLIEiJ_G0018779) #27	Homer1 (MGP_CAROLIEiJ_G0018778) #29	Tent2 (MGP_CAROLIEiJ_G0018777)	MGP_CAROLIEiJ_G0018776 #31	Mtx3 (MGP_CAROLIEiJ_G0018775) #32	Thbs4 (MGP_CAROLIEiJ_G0018774) #34	Serinc5 (MGP_CAROLIEiJ_G0018773) #36	Spz1 (MGP_CAROLIEiJ_G0018772)	Zfyve16 (MGP_CAROLIEiJ_G0018771)	Fam151b (MGP_CAROLIEiJ_G0018770)	Ankrd34b (MGP_CAROLIEiJ_G0018769)	Dhfr (MGP_CAROLIEiJ_G0018768)	Msh3 (MGP_CAROLIEiJ_G0018767)	Rasgrf2 (MGP_CAROLIEiJ_G0018766)	Ckmt2 (MGP_CAROLIEiJ_G0018765)
Shrew mouse	MODERN SPECIES	2	S100z (MGP_PahariEiJ_G0015874)	Crhbp (MGP_PahariEiJ_G0015873)	Aggf1 (MGP_PahariEiJ_G0015872) #7	Zbed3 (MGP_PahariEiJ_G0015871) #8	Pde8b (MGP_PahariEiJ_G0015870) #9	MGP_PahariEiJ_G0015869 #10	Otp (MGP_PahariEiJ_G0015868) #11	Tbca (MGP_PahariEiJ_G0015867) #14	Ap3b1 (MGP_PahariEiJ_G0015866) #17	MGP_PahariEiJ_G0015865	Scamp1 (MGP_PahariEiJ_G0015864) #18	Lhfpl2 (MGP_PahariEiJ_G0015863) #19	Arsb (MGP_PahariEiJ_G0015862)	Dmgdh (MGP_PahariEiJ_G0015861) #21	MGP_PahariEiJ_G0015860 ##22	MGP_PahariEiJ_G0015859 #23	Jmy (MGP_PahariEiJ_G0015858) #27	Homer1 (MGP_PahariEiJ_G0015857) #29	Tent2 (MGP_PahariEiJ_G0015856)	Cmya5 (MGP_PahariEiJ_G0015855) #31	Mtx3 (MGP_PahariEiJ_G0015854) #32	Thbs4 (MGP_PahariEiJ_G0015853) #34	Serinc5 (MGP_PahariEiJ_G0015852) #36	Spz1 (MGP_PahariEiJ_G0015851)	Zfyve16 (MGP_PahariEiJ_G0015850)	Fam151b (MGP_PahariEiJ_G0015849)	Ankrd34b (MGP_PahariEiJ_G0015848)	Dhfr (MGP_PahariEiJ_G0015847)	Msh3 (MGP_PahariEiJ_G0015846)	Rasgrf2 (MGP_PahariEiJ_G0015845)	Ckmt2 (MGP_PahariEiJ_G0015844)
Rat	MODERN SPECIES	11	LOC100912266 (ENSRNOG00000059441)	ENSRNOG00000067662	Pde8b (ENSRNOG00000010280) #9	Wdr41 (ENSRNOG00000025462) #10	Otp (ENSRNOG00000010560) #11	Tbca (ENSRNOG00000048342) #14	ENSRNOG00000068970	Ap3b1 (ENSRNOG00000010624) #17	Scamp1 (ENSRNOG00000061582) #18	Lhfpl2 (ENSRNOG00000011032) #19	Arsb (ENSRNOG00000011150)	Dmgdh (ENSRNOG00000023588) #21	Bhmt2 (ENSRNOG00000040120) #22	LOC103691423 (ENSRNOG00000029988)	AABR07007675.2 (ENSRNOG00000058886)	Bhmt (ENSRNOG00000011200) #23	Jmy (ENSRNOG00000050343) #27	Homer1 (ENSRNOG00000047014) #29	Tent2 (ENSRNOG00000012099)	Cmya5 (ENSRNOG00000023803) #31	Mtx3 (ENSRNOG00000023837) #32	Thbs4 (ENSRNOG00000012471) #34	Serinc5 (ENSRNOG00000024039) #36	Spz1 (ENSRNOG00000013050)	Zfyve16 (ENSRNOG00000013055)	Fam151b (ENSRNOG00000024136)	Ankrd34b (ENSRNOG00000040166)	Dhfr (ENSRNOG00000013521)	ENSRNOG00000069130	ENSRNOG00000064838	Rasgrf2 (ENSRNOG00000056151)
Cricetidae	ANCESTRAL SPECIES	11	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Northern American deer mouse	MODERN SPECIES	6	Iqgap2 (ENSPEMG00000013395)	F2r (ENSPEMG00000025363)	F2rl1 (ENSPEMG00000029040)	S100z (ENSPEMG00000013966)	Crhbp (ENSPEMG00000009836)	Aggf1 (ENSPEMG00000015659) #7	Pde8b (ENSPEMG00000020359) #9	ENSPEMG00000023412 #10	Tbca (ENSPEMG00000015419) #14	Ap3b1 (ENSPEMG00000021014) #17	Scamp1 (ENSPEMG00000029280) #18	Lhfpl2 (ENSPEMG00000029932) #19	Arsb (ENSPEMG00000020554)	Dmgdh (ENSPEMG00000021307) #21	Bhmt2 (ENSPEMG00000021198) #22	ENSPEMG00000020841 #23	ENSPEMG00000030474	ENSPEMG00000026488	Jmy (ENSPEMG00000021018) #27	Homer1 (ENSPEMG00000016563) #29	Tent2 (ENSPEMG00000022209)	Cmya5 (ENSPEMG00000020808) #31	ENSPEMG00000028963	Mtx3 (ENSPEMG00000020867) #32	Thbs4 (ENSPEMG00000021194) #34	Serinc5 (ENSPEMG00000020960) #36	Spz1 (ENSPEMG00000007489)	Zfyve16 (ENSPEMG00000020714)	ENSPEMG00000024785	Ankrd34b (ENSPEMG00000016771)	Dhfr (ENSPEMG00000029212)
Prairie vole	MODERN SPECIES	6	Aggf1 (ENSMOCG00000003377) #7	Zbed3 (ENSMOCG00000011692) #8	Pde8b (ENSMOCG00000012277) #9	Wdr41 (ENSMOCG00000006320) #10	ENSMOCG00000006214	Otp (ENSMOCG00000019228) #11	Tbca (ENSMOCG00000005814) #14	ENSMOCG00000006493	ENSMOCG00000005321	Ap3b1 (ENSMOCG00000017264) #17	Scamp1 (ENSMOCG00000001373) #18	Lhfpl2 (ENSMOCG00000001998) #19	Arsb (ENSMOCG00000000278)	Dmgdh (ENSMOCG00000004222) #21	Bhmt2 (ENSMOCG00000018570) #22	ENSMOCG00000012797 #23	Jmy (ENSMOCG00000000972) #27	Homer1 (ENSMOCG00000003233) #29	Tent2 (ENSMOCG00000013416)	Cmya5 (ENSMOCG00000020302) #31	Mtx3 (ENSMOCG00000017246) #32	Thbs4 (ENSMOCG00000017937) #34	Serinc5 (ENSMOCG00000017376) #36	Zfyve16 (ENSMOCG00000016512)	Fam151b (ENSMOCG00000012595)	Ankrd34b (ENSMOCG00000013232)	Dhfr (ENSMOCG00000014691)	Msh3 (ENSMOCG00000018492)	Rasgrf2 (ENSMOCG00000015751)	Ckmt2 (ENSMOCG00000003563)	Zcchc9 (ENSMOCG00000012433)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Chinese hamster chok1gshd	MODERN SPECIES	1	S100z (ENSCGRG00001009971)	Crhbp (ENSCGRG00001008314)	Aggf1 (ENSCGRG00001017039) #7	Zbed3 (ENSCGRG00001010271) #8	Pde8b (ENSCGRG00001015606) #9	Wdr41 (ENSCGRG00001008129) #10	ENSCGRG00001008932	Otp (ENSCGRG00001022392) #11	Tbca (ENSCGRG00001021971) #14	Ap3b1 (ENSCGRG00001009397) #17	Scamp1 (ENSCGRG00001004428) #18	Lhfpl2 (ENSCGRG00001003627) #19	Arsb (ENSCGRG00001015736)	Dmgdh (ENSCGRG00001014647) #21	Bhmt2 (ENSCGRG00001007704) #22	ENSCGRG00001019116 #23	Jmy (ENSCGRG00001018071) #27	Homer1 (ENSCGRG00001013582) #29	Tent2 (ENSCGRG00001009951)	Cmya5 (ENSCGRG00001003968) #31	ENSCGRG00001008349	Mtx3 (ENSCGRG00001011412) #32	Thbs4 (ENSCGRG00001016664) #34	Serinc5 (ENSCGRG00001018453) #36	Spz1 (ENSCGRG00001008238)	Zfyve16 (ENSCGRG00001010507)	Fam151b (ENSCGRG00001014403)	Ankrd34b (ENSCGRG00001007953)	DHFR (ENSCGRG00001012555)	Msh3 (ENSCGRG00001012207)	Rasgrf2 (ENSCGRG00001001184)
Golden Hamster	MODERN SPECIES	620	F2r (ENSMAUG00000010556)	F2rl1 (ENSMAUG00000012126)	S100z (ENSMAUG00000001531)	Crhbp (ENSMAUG00000010702)	Aggf1 (ENSMAUG00000012678) #7	Pde8b (ENSMAUG00000015472) #9	Wdr41 (ENSMAUG00000004461) #10	Otp (ENSMAUG00000007760) #11	Tbca (ENSMAUG00000018233) #14	Ap3b1 (ENSMAUG00000001490) #17	Scamp1 (ENSMAUG00000018961) #18	Lhfpl2 (ENSMAUG00000020241) #19	Arsb (ENSMAUG00000005115)	Dmgdh (ENSMAUG00000011337) #21	Bhmt2 (ENSMAUG00000008057) #22	ENSMAUG00000004226 #23	Jmy (ENSMAUG00000015175) #27	Homer1 (ENSMAUG00000011151) #29	Tent2 (ENSMAUG00000012442)	Mtx3 (ENSMAUG00000022165) #32	Thbs4 (ENSMAUG00000009316) #34	Serinc5 (ENSMAUG00000009651) #36	Zfyve16 (ENSMAUG00000001716)	Fam151b (ENSMAUG00000022170)	Ankrd34b (ENSMAUG00000015327)	ENSMAUG00000020170	Msh3 (ENSMAUG00000021619)	Rasgrf2 (ENSMAUG00000016036)	Ckmt2 (ENSMAUG00000008773)	Zcchc9 (ENSMAUG00000022026)	Acot12 (ENSMAUG00000019809)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1658											Scamp1 (ENSNGAG00000014989) #18	Lhfpl2 (ENSNGAG00000000969) #19	Arsb (ENSNGAG00000000124)	Dmgdh (ENSNGAG00000016798) #21	Bhmt2 (ENSNGAG00000013853) #22	ENSNGAG00000020657 #23	Jmy (ENSNGAG00000019761) #27	Homer1 (ENSNGAG00000010741) #29	Tent2 (ENSNGAG00000014869)	Cmya5 (ENSNGAG00000019733) #31	Mtx3 (ENSNGAG00000017121) #32	Thbs4 (ENSNGAG00000003456) #34	Serinc5 (ENSNGAG00000000574) #36	Zfyve16 (ENSNGAG00000019708)	Fam151b (ENSNGAG00000005930)	Ankrd34b (ENSNGAG00000000386)	ENSNGAG00000019496	Dhfr (ENSNGAG00000018704)	Msh3 (ENSNGAG00000014298)	Rasgrf2 (ENSNGAG00000008843)	Ckmt2 (ENSNGAG00000020619)
Lesser Egyptian jerboa	MODERN SPECIES	45				Aggf1 (ENSJJAG00000012003) #7	Zbed3 (ENSJJAG00000018785) #8	Pde8b (ENSJJAG00000023506) #9	ENSJJAG00000014477 #10	Otp (ENSJJAG00000018309) #11	ENSJJAG00000010595 #14	Ap3b1 (ENSJJAG00000017048) #17	Scamp1 (ENSJJAG00000015531) #18	Lhfpl2 (ENSJJAG00000016377) #19	Arsb (ENSJJAG00000011676)	Dmgdh (ENSJJAG00000011285) #21	Bhmt2 (ENSJJAG00000011883) #22	ENSJJAG00000022436 #23	Jmy (ENSJJAG00000015924) #27	Homer1 (ENSJJAG00000014750) #29	ENSJJAG00000012875	Tent2 (ENSJJAG00000015469)	Cmya5 (ENSJJAG00000020442) #31	Mtx3 (ENSJJAG00000022368) #32	Thbs4 (ENSJJAG00000014572) #34	Serinc5 (ENSJJAG00000011189) #36	Zfyve16 (ENSJJAG00000019491)	Fam151b (ENSJJAG00000012833)	Ankrd34b (ENSJJAG00000000619)	ENSJJAG00000011657	Msh3 (ENSJJAG00000021941)	Rasgrf2 (ENSJJAG00000016070)	Ckmt2 (ENSJJAG00000016214)
Kangaroo rat	MODERN SPECIES	347	Erbin (ENSDORG00000005290)	Nln (ENSDORG00000008485)	Sgtb (ENSDORG00000008484)	Trappc13 (ENSDORG00000008478)	Trim23 (ENSDORG00000008476)	Aggf1 (ENSDORG00000005780) #7	Pde8b (ENSDORG00000006070) #9	ENSDORG00000006071 #10	Otp (ENSDORG00000014140) #11	Tbca (ENSDORG00000026937) #14	Ap3b1 (ENSDORG00000009609) #17	Scamp1 (ENSDORG00000011767) #18	Lhfpl2 (ENSDORG00000027446) #19	Arsb (ENSDORG00000009219)	Dmgdh (ENSDORG00000000991) #21	ENSDORG00000025667 #23	Jmy (ENSDORG00000005525) #27	Homer1 (ENSDORG00000009374) #29	Tent2 (ENSDORG00000007850)	Cmya5 (ENSDORG00000026339) #31	Mtx3 (ENSDORG00000028356) #32	Thbs4 (ENSDORG00000005073) #34	Serinc5 (ENSDORG00000005075) #36	Zfyve16 (ENSDORG00000002451)	Fam151b (ENSDORG00000015177)	Ankrd34b (ENSDORG00000026971)	Dhfr (ENSDORG00000024821)	Msh3 (ENSDORG00000005509)	Rasgrf2 (ENSDORG00000001359)	Ckmt2 (ENSDORG00000015691)	Zcchc9 (ENSDORG00000001300)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949.f	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Marmotini	ANCESTRAL SPECIES	23	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00530000063681.b.a	ENSGT00390000012355.A.a	ENSGT00390000010283	ENSGT00550000074949.f	ENSGT00940000155679	ENSGT00950000182772.B.a.a
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT00940000161793	ENSGT00940000153352.A	ENSGT00940000163369	ENSGT00730000111121 #7	ENSGT00940000164103 #8	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00950000182767.a.b.b	ENSGT00940000154290.b	ENSGT00960000189962
Squirrel	MODERN SPECIES	149	ENSSTOG00000028701	ENSSTOG00000012288	ENSSTOG00000023234	AGGF1 (ENSSTOG00000021590) #7	ZBED3 (ENSSTOG00000003989) #8	PDE8B (ENSSTOG00000001468) #9	WDR41 (ENSSTOG00000028633) #10	OTP (ENSSTOG00000007544) #11	TBCA (ENSSTOG00000009840) #14	AP3B1 (ENSSTOG00000014099) #17	SCAMP1 (ENSSTOG00000023531) #18	LHFPL2 (ENSSTOG00000004457) #19	ARSB (ENSSTOG00000005818)	DMGDH (ENSSTOG00000005837) #21	BHMT2 (ENSSTOG00000005871) #22	BHMT (ENSSTOG00000005887) #23	JMY (ENSSTOG00000021490) #27	HOMER1 (ENSSTOG00000003164) #29	TENT2 (ENSSTOG00000027293)	MTX3 (ENSSTOG00000023002) #32	THBS4 (ENSSTOG00000009080) #34	SERINC5 (ENSSTOG00000009098) #36	ENSSTOG00000025704
Arctic ground squirrel	MODERN SPECIES	118	ENSUPAG00010014578	ENSUPAG00010014496	ENSUPAG00010014488	AGGF1 (ENSUPAG00010014439) #7	ZBED3 (ENSUPAG00010014432) #8	PDE8B (ENSUPAG00010013724) #9	WDR41 (ENSUPAG00010013668) #10	OTP (ENSUPAG00010013666) #11	TBCA (ENSUPAG00010013662) #14	AP3B1 (ENSUPAG00010013612) #17	SCAMP1 (ENSUPAG00010013586) #18	LHFPL2 (ENSUPAG00010013572) #19	ARSB (ENSUPAG00010013552)	DMGDH (ENSUPAG00010013523) #21	BHMT2 (ENSUPAG00010013504) #22	BHMT (ENSUPAG00010013490) #23	ENSUPAG00010013477	JMY (ENSUPAG00010013443) #27	HOMER1 (ENSUPAG00010013346) #29
Alpin marmot	MODERN SPECIES	48	BDP1 (ENSMMMG00000002729)	ENSMMMG00000003028	ENSMMMG00000003037	ENSMMMG00000003082	AGGF1 (ENSMMMG00000003093) #7	ZBED3 (ENSMMMG00000003120) #8	PDE8B (ENSMMMG00000003165) #9	WDR41 (ENSMMMG00000003481) #10	TBCA (ENSMMMG00000003516) #14	AP3B1 (ENSMMMG00000003600) #17	SCAMP1 (ENSMMMG00000006853) #18	LHFPL2 (ENSMMMG00000006878) #19	ARSB (ENSMMMG00000006892)	DMGDH (ENSMMMG00000006902) #21	BHMT2 (ENSMMMG00000006929) #22	BHMT (ENSMMMG00000006936) #23	JMY (ENSMMMG00000006956) #27	HOMER1 (ENSMMMG00000006979) #29	TENT2 (ENSMMMG00000007231)	CMYA5 (ENSMMMG00000007285) #31	MTX3 (ENSMMMG00000007317) #32	THBS4 (ENSMMMG00000007323) #34	SERINC5 (ENSMMMG00000007357) #36	ENSMMMG00000007362	ENSMMMG00000007367	FAM151B (ENSMMMG00000007697)	ANKRD34B (ENSMMMG00000007710)	ENSMMMG00000007718	MSH3 (ENSMMMG00000007726)	ENSMMMG00000007796	CKMT2 (ENSMMMG00000007828)
Eurasian red squirrel	MODERN SPECIES	15	AGGF1 (ENSSVLG00005004621) #7	ENSSVLG00005004600 #8	ENSSVLG00005004578 #8	ENSSVLG00005004554	PDE8B (ENSSVLG00005004357) #9	WDR41 (ENSSVLG00005014989) #10	OTP (ENSSVLG00005014921) #11	TBCA (ENSSVLG00005014739) #14	AP3B1 (ENSSVLG00005014385) #17	SCAMP1 (ENSSVLG00005014260) #18	LHFPL2 (ENSSVLG00005014202) #19	ARSB (ENSSVLG00005013953)	DMGDH (ENSSVLG00005013801) #21	BHMT2 (ENSSVLG00005013681) #22	ENSSVLG00005013529	BHMT (ENSSVLG00005013463) #23	JMY (ENSSVLG00005013142) #27	ENSSVLG00005013053	HOMER1 (ENSSVLG00005012639) #29	TENT2 (ENSSVLG00005012556)	CMYA5 (ENSSVLG00005012391) #31	MTX3 (ENSSVLG00005012299) #32	THBS4 (ENSSVLG00005011815) #34	SERINC5 (ENSSVLG00005011745) #36	ENSSVLG00005011728	ENSSVLG00005011673	FAM151B (ENSSVLG00005011621)	ENSSVLG00005011570	ANKRD34B (ENSSVLG00005011548)	ENSSVLG00005011452	MSH3 (ENSSVLG00005010940)
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Hystricomorpha_a	ANCESTRAL SPECIES	72	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Hystricomorpha_b	ANCESTRAL SPECIES	95	ENSGT00950000183076.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026.c #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34
Long-tailed chinchilla	MODERN SPECIES	132	S100Z (ENSCLAG00000010354)	CRHBP (ENSCLAG00000009942)	AGGF1 (ENSCLAG00000012928) #7	PDE8B (ENSCLAG00000011619) #9	WDR41 (ENSCLAG00000010095) #10	OTP (ENSCLAG00000011647) #11	TBCA (ENSCLAG00000011463) #14	AP3B1 (ENSCLAG00000017374) #17	ENSCLAG00000017966	SCAMP1 (ENSCLAG00000010430) #18	LHFPL2 (ENSCLAG00000010028) #19	ENSCLAG00000009820	ARSB (ENSCLAG00000013316)	DMGDH (ENSCLAG00000014854) #21	BHMT2 (ENSCLAG00000013633) #22	BHMT (ENSCLAG00000010253) #23	JMY (ENSCLAG00000009333) #27	HOMER1 (ENSCLAG00000010571) #29	TENT2 (ENSCLAG00000010023)	CMYA5 (ENSCLAG00000009334) #31	MTX3 (ENSCLAG00000011076) #32	THBS4 (ENSCLAG00000009452) #34	CCAR1 (ENSCLAG00000011807)	SLC25A16 (ENSCLAG00000015512)	DNA2 (ENSCLAG00000012086)	RUFY2 (ENSCLAG00000012405)	HNRNPH3 (ENSCLAG00000010680)	PBLD (ENSCLAG00000010284)	ENSCLAG00000014026	MYPN (ENSCLAG00000011004)	HERC4 (ENSCLAG00000016138)
Degu	MODERN SPECIES	279		OTP (ENSODEG00000001674) #11	ENSODEG00000001698 #14	ENSODEG00000018710	ENSODEG00000018773	ENSODEG00000001711	AP3B1 (ENSODEG00000001757) #17	ENSODEG00000001855	ENSODEG00000001866	SCAMP1 (ENSODEG00000001895) #18	LHFPL2 (ENSODEG00000003251) #19	ENSODEG00000003273	ARSB (ENSODEG00000003302)	DMGDH (ENSODEG00000003394) #21	BHMT2 (ENSODEG00000003503) #22	BHMT (ENSODEG00000003547) #23	JMY (ENSODEG00000003622) #27	ENSODEG00000003653	HOMER1 (ENSODEG00000003750) #29	TENT2 (ENSODEG00000003946)	MTX3 (ENSODEG00000004002) #32	ENSODEG00000004025	THBS4 (ENSODEG00000004087) #34
Guinea pig	MODERN SPECIES	83					AGGF1 (ENSCPOG00000003545) #7	PDE8B (ENSCPOG00000001181) #9	WDR41 (ENSCPOG00000001183) #10	OTP (ENSCPOG00000009888) #11	TBCA (ENSCPOG00000035914) #14	AP3B1 (ENSCPOG00000000479) #17	SCAMP1 (ENSCPOG00000038700) #18	LHFPL2 (ENSCPOG00000035182) #19	ARSB (ENSCPOG00000040291)	DMGDH (ENSCPOG00000001913) #21	BHMT2 (ENSCPOG00000004265) #22	BHMT (ENSCPOG00000039971) #23	JMY (ENSCPOG00000008290) #27	HOMER1 (ENSCPOG00000007454) #29	TENT2 (ENSCPOG00000005462)	CMYA5 (ENSCPOG00000036038) #31	MTX3 (ENSCPOG00000024084) #32	THBS4 (ENSCPOG00000004926) #34	PARP4 (ENSCPOG00000014672)	ASPH (ENSCPOG00000007346)	CLVS1 (ENSCPOG00000007342)	CHD7 (ENSCPOG00000013385)	RAB2A (ENSCPOG00000035393)	CA8 (ENSCPOG00000025176)	TOX (ENSCPOG00000010812)	NSMAF (ENSCPOG00000013618)	SDCBP (ENSCPOG00000013616)
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000002178 #9	ENSHGLG00000041303	ENSHGLG00000038347	ENSHGLG00000017808 #10	OTP (ENSHGLG00000003908) #11	ENSHGLG00000000425 #14	ENSHGLG00000019786	AP3B1 (ENSHGLG00000001480) #17	SCAMP1 (ENSHGLG00000048514) #18	ENSHGLG00000035099	ENSHGLG00000040355	ENSHGLG00000000380	ARSB (ENSHGLG00000000586)	DMGDH (ENSHGLG00000000837) #21	BHMT2 (ENSHGLG00000036952) #22	BHMT (ENSHGLG00000050585) #23	ENSHGLG00000045617	JMY (ENSHGLG00000002781) #27	HOMER1 (ENSHGLG00000001109) #29	TENT2 (ENSHGLG00000008742)	CMYA5 (ENSHGLG00000011995) #31	MTX3 (ENSHGLG00000034356) #32	ENSHGLG00000041734	ENSHGLG00000002153 #34	ENSHGLG00000019982	ENSHGLG00000045404	ENSHGLG00000025275	ENSHGLG00000034932	ENSHGLG00000034451	ENSHGLG00000045248	ENSHGLG00000020952
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Opossum	MODERN SPECIES	2	AGGF1 (ENSMODG00000019743) #7	ENSMODG00000025309	ENSMODG00000044321	PDE8B (ENSMODG00000019740) #9	WDR41 (ENSMODG00000019738) #10	OTP (ENSMODG00000019736) #11	ENSMODG00000050562 #14	ENSMODG00000050949	AP3B1 (ENSMODG00000019733) #17	SCAMP1 (ENSMODG00000019731) #18	LHFPL2 (ENSMODG00000019730) #19	ENSMODG00000050358	ENSMODG00000044503	ARSB (ENSMODG00000019728)	DMGDH (ENSMODG00000019727) #21	BHMT (ENSMODG00000025328) #23	ENSMODG00000039958	JMY (ENSMODG00000019723) #27	HOMER1 (ENSMODG00000019719) #29	TENT2 (ENSMODG00000019716)	ENSMODG00000044289 #31	MTX3 (ENSMODG00000019709) #32	THBS4 (ENSMODG00000019706) #34	SERINC5 (ENSMODG00000019704) #36	CDK7 (ENSMODG00000019702)	MRPS36 (ENSMODG00000019701)	ENSMODG00000025601	CCNB1 (ENSMODG00000019699)	ENSMODG00000019697	PIK3R1 (ENSMODG00000019685)	ENSMODG00000025347
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Tasmanian devil	MODERN SPECIES		F2R (ENSSHAG00000009153)	F2RL1 (ENSSHAG00000008088)	S100Z (ENSSHAG00000028739)	CRHBP (ENSSHAG00000006864)	AGGF1 (ENSSHAG00000004570) #7	PDE8B (ENSSHAG00000018263) #9	WDR41 (ENSSHAG00000018180) #10	OTP (ENSSHAG00000018090) #11	TBCA (ENSSHAG00000025953) #14	AP3B1 (ENSSHAG00000017224) #17	SCAMP1 (ENSSHAG00000016943) #18	LHFPL2 (ENSSHAG00000028883) #19	ARSB (ENSSHAG00000015401)	DMGDH (ENSSHAG00000014992) #21	BHMT2 (ENSSHAG00000014959) #22	BHMT (ENSSHAG00000014860) #23	JMY (ENSSHAG00000014317) #27	HOMER1 (ENSSHAG00000013501) #29	TENT2 (ENSSHAG00000012861)	ENSSHAG00000028352 #31	ENSSHAG00000026281	MTX3 (ENSSHAG00000010987) #32	THBS4 (ENSSHAG00000010181) #34	ENSSHAG00000009073 #36	ENSSHAG00000023163	MRPS36 (ENSSHAG00000025478)	ENSSHAG00000028749	CCNB1 (ENSSHAG00000007685)	SLC30A5 (ENSSHAG00000007104)	PIK3R1 (ENSSHAG00000008078)	CD180 (ENSSHAG00000012273)
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Wallaby	MODERN SPECIES	3843																ENSMEUG00000015019 #23	ENSMEUG00000015027	BHMT2 (ENSMEUG00000015033) #22
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00980000201383.C	ENSGT00940000163343	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.c.b #22	ENSGT00390000003122.c.a #23	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00940000179410	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
koala	MODERN SPECIES	73	CRHBP (ENSPCIG00000032088)	AGGF1 (ENSPCIG00000002077) #7	ENSPCIG00000002090	ENSPCIG00000002120	PDE8B (ENSPCIG00000002178) #9	WDR41 (ENSPCIG00000002260) #10	OTP (ENSPCIG00000014906) #11	ENSPCIG00000014903 #14	ENSPCIG00000017497 #17	ENSPCIG00000031686 #17	SCAMP1 (ENSPCIG00000024949) #18	LHFPL2 (ENSPCIG00000024952) #19	ARSB (ENSPCIG00000028419)	DMGDH (ENSPCIG00000013849) #21	ENSPCIG00000032210 #22	BHMT (ENSPCIG00000009033) #23	JMY (ENSPCIG00000011631) #27	HOMER1 (ENSPCIG00000011621) #29	TENT2 (ENSPCIG00000000393)	ENSPCIG00000000433 #31	ENSPCIG00000000662	MTX3 (ENSPCIG00000000698) #32	THBS4 (ENSPCIG00000000721) #34	SERINC5 (ENSPCIG00000000729) #36	CDK7 (ENSPCIG00000000747)	MRPS36 (ENSPCIG00000000776)	ENSPCIG00000000791	CCNB1 (ENSPCIG00000000812)	SLC30A5 (ENSPCIG00000000830)	PIK3R1 (ENSPCIG00000008648)
Theria	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Carnivora	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Caniformia	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Ursidae	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Giant Panda	MODERN SPECIES	1942																ENSAMEG00000025075 ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Glires	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Rodentia	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Muroidea	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Murinae	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Mus	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Shrew mouse	MODERN SPECIES	2	F2rl1 (MGP_PahariEiJ_G0015875)	S100z (MGP_PahariEiJ_G0015874)	Crhbp (MGP_PahariEiJ_G0015873)	Aggf1 (MGP_PahariEiJ_G0015872) #7	Zbed3 (MGP_PahariEiJ_G0015871) #8	Pde8b (MGP_PahariEiJ_G0015870) #9	MGP_PahariEiJ_G0015869 #10	Otp (MGP_PahariEiJ_G0015868) #11	Tbca (MGP_PahariEiJ_G0015867) #14	Ap3b1 (MGP_PahariEiJ_G0015866) #17	MGP_PahariEiJ_G0015865	Scamp1 (MGP_PahariEiJ_G0015864) #18	Lhfpl2 (MGP_PahariEiJ_G0015863) #19	Arsb (MGP_PahariEiJ_G0015862)	Dmgdh (MGP_PahariEiJ_G0015861) #21	MGP_PahariEiJ_G0015860 ##22	MGP_PahariEiJ_G0015859 #23	Jmy (MGP_PahariEiJ_G0015858) #27	Homer1 (MGP_PahariEiJ_G0015857) #29	Tent2 (MGP_PahariEiJ_G0015856)	Cmya5 (MGP_PahariEiJ_G0015855) #31	Mtx3 (MGP_PahariEiJ_G0015854) #32	Thbs4 (MGP_PahariEiJ_G0015853) #34	Serinc5 (MGP_PahariEiJ_G0015852) #36	Spz1 (MGP_PahariEiJ_G0015851)	Zfyve16 (MGP_PahariEiJ_G0015850)	Fam151b (MGP_PahariEiJ_G0015849)	Ankrd34b (MGP_PahariEiJ_G0015848)	Dhfr (MGP_PahariEiJ_G0015847)	Msh3 (MGP_PahariEiJ_G0015846)	Rasgrf2 (MGP_PahariEiJ_G0015845)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.d ##22
Rabbit	MODERN SPECIES	813															DMGDH (ENSOCUG00000013960) #21	ENSOCUG00000004842 ##22
Platypus	MODERN SPECIES		F2RL2 (ENSOANG00000015767)	F2R (ENSOANG00000039957)	S100Z (ENSOANG00000015763)	CRHBP (ENSOANG00000031473)	AGGF1 (ENSOANG00000015762) #7	ENSOANG00000015761	PDE8B (ENSOANG00000003104) #9	WDR41 (ENSOANG00000003103) #10	OTP (ENSOANG00000039355) #11	ENSOANG00000036619	AP3B1 (ENSOANG00000003100) #17	SCAMP1 (ENSOANG00000045234) #18	LHFPL2 (ENSOANG00000037815) #19	ARSB (ENSOANG00000007901)	DMGDH (ENSOANG00000007898) #21	ENSOANG00000007895 #22	JMY (ENSOANG00000007892) #27	HOMER1 (ENSOANG00000007891) #29	TENT2 (ENSOANG00000007888)	ENSOANG00000039864 #31	MTX3 (ENSOANG00000012639) #32	THBS4 (ENSOANG00000044275) #34	SERINC5 (ENSOANG00000007885) #36	MRPS36 (ENSOANG00000046008)	CCNB1 (ENSOANG00000010650)	SLC30A5 (ENSOANG00000046573)	ENSOANG00000046324	MERTK (ENSOANG00000041243)	ANAPC1 (ENSOANG00000040996)	BCL2L11 (ENSOANG00000039616)	ACOXL (ENSOANG00000012630)
Sauria	ANCESTRAL SPECIES	5	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Archosauria	ANCESTRAL SPECIES	1	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Aves	ANCESTRAL SPECIES	4	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Neognathae	ANCESTRAL SPECIES	12	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Anatidae	ANCESTRAL SPECIES	20	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00960000189505	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Pink-footed goose	MODERN SPECIES	182															ARSB (ENSABRG00000022593)	ENSABRG00000022592 #22	DMGDH (ENSABRG00000022591) #21	JMY (ENSABRG00000022589) #27	HOMER1 (ENSABRG00000022588) #29	ENSABRG00000022587	TENT2 (ENSABRG00000022586)	CMYA5 (ENSABRG00000022583) #31	MTX3 (ENSABRG00000022578) #32	ENSABRG00000022577	SERINC5 (ENSABRG00000022576) #36	CDK7 (ENSABRG00000022574)	MRPS36 (ENSABRG00000022573)	CENPH (ENSABRG00000022572)	CCNB1 (ENSABRG00000022570)	SLC30A5 (ENSABRG00000022565)	PIK3R1 (ENSABRG00000022553)
Duck	MODERN SPECIES	4281	F2RL1 (ENSAPLG00000028669)	S100Z (ENSAPLG00000002758)	CRHBP (ENSAPLG00000002564)	AGGF1 (ENSAPLG00000001528) #7	ENSAPLG00000027714	PDE8B (ENSAPLG00000007395) #9	WDR41 (ENSAPLG00000007656) #10	ENSAPLG00000027407	ENSAPLG00000023605	AP3B1 (ENSAPLG00000013675) #17	ENSAPLG00000016508	SCAMP1 (ENSAPLG00000030262) #18	LHFPL2 (ENSAPLG00000018490) #19	ARSB (ENSAPLG00000009330)	DMGDH (ENSAPLG00000008567) #21	ENSAPLG00000008403 #22	JMY (ENSAPLG00000008348) #27	HOMER1 (ENSAPLG00000007877) #29	TENT2 (ENSAPLG00000007600)	CMYA5 (ENSAPLG00000023658) #31	MTX3 (ENSAPLG00000006896) #32	ENSAPLG00000006149	SERINC5 (ENSAPLG00000005798) #36	CDK7 (ENSAPLG00000005769)	CENPH (ENSAPLG00000021827)	SLC30A5 (ENSAPLG00000005422)	ENSAPLG00000028931	PIK3R1 (ENSAPLG00000004772)	CD180 (ENSAPLG00000004707)	MAST4 (ENSAPLG00000020182)	ENSAPLG00000019269
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247
Chicken	MODERN SPECIES	131	F2RL2 (ENSGALG00010010783)	IQGAP2 (ENSGALG00010010688)	F2RL1 (ENSGALG00010010599)	S100Z (ENSGALG00010011454)	CRHBP (ENSGALG00010011451)	AGGF1 (ENSGALG00010010457) #7	PDE8B (ENSGALG00010010275) #9	WDR41 (ENSGALG00010010254) #10	OTP (ENSGALG00010011364) #11	TBCA (ENSGALG00010012795)	AP3B1 (ENSGALG00010012751) #17	SCAMP1 (ENSGALG00010012667) #18	LHFPL2 (ENSGALG00010012614) #19	ARSB (ENSGALG00010013306)	DMGDH (ENSGALG00010012599) #21	ENSGALG00010012555 #22	JMY (ENSGALG00010012535) #27	HOMER1 (ENSGALG00010012521) #29	ENSGALG00010012457	ENSGALG00010012453	TENT2 (ENSGALG00010012439)	ENSGALG00010012414 #31	MTX3 (ENSGALG00010011559) #32	THBS4 (ENSGALG00010010122)	SERINC5 (ENSGALG00010011515) #36	CDK7 (ENSGALG00010010937)	MRPS36 (ENSGALG00010010834)	CENPH (ENSGALG00010010809)	SLC30A5 (ENSGALG00010010751)	PIK3R1 (ENSGALG00010011922)	CD180 (ENSGALG00010010411)
Turkey	MODERN SPECIES	1299	ENSMGAG00000022885	SV2C (ENSMGAG00000004851)	F2RL2 (ENSMGAG00000016024)	IQGAP2 (ENSMGAG00000004823)	F2R (ENSMGAG00000020653)	F2RL1 (ENSMGAG00000016031)	S100Z (ENSMGAG00000020183)	CRHBP (ENSMGAG00000018504)	AGGF1 (ENSMGAG00000004796) #7	PDE8B (ENSMGAG00000004773) #9	WDR41 (ENSMGAG00000004765) #10	ENSMGAG00000019777	AP3B1 (ENSMGAG00000016635) #17	ENSMGAG00000018452 #18	LHFPL2 (ENSMGAG00000004731) #19	ENSMGAG00000009256 #22	ARSB (ENSMGAG00000018561)	HOMER1 (ENSMGAG00000020868) #29	TENT2 (ENSMGAG00000017305)	ENSMGAG00000018641 #31	MTX3 (ENSMGAG00000008907) #32	ENSMGAG00000020927	ENSMGAG00000004549	ENSMGAG00000017558	PIK3R1 (ENSMGAG00000017079)	ENSMGAG00000004617	ENSMGAG00000019352	ENSMGAG00000018533	ENSMGAG00000004557	ENSMGAG00000004025 #36	ENSMGAG00000003575
Japanese quail	MODERN SPECIES	699	RPL37 (ENSCJPG00005007923)	ENSCJPG00005007926	F2RL1 (ENSCJPG00005007928)	S100Z (ENSCJPG00005007930)	CRHBP (ENSCJPG00005007931)	AGGF1 (ENSCJPG00005007934) #7	PDE8B (ENSCJPG00005007937) #9	WDR41 (ENSCJPG00005007966) #10	OTP (ENSCJPG00005007969) #11	TBCA (ENSCJPG00005007972) #14	AP3B1 (ENSCJPG00005007978) #17	SCAMP1 (ENSCJPG00005007980) #18	LHFPL2 (ENSCJPG00005007982) #19	ARSB (ENSCJPG00005007983)	DMGDH (ENSCJPG00005007984) #21	ENSCJPG00005007985 #22	JMY (ENSCJPG00005007986) #27	HOMER1 (ENSCJPG00005008006) #29	ENSCJPG00005008008	TENT2 (ENSCJPG00005008009)	ENSCJPG00005008010 #31	MTX3 (ENSCJPG00005008011) #32	ENSCJPG00005008032	SERINC5 (ENSCJPG00005008033) #36	CDK7 (ENSCJPG00005008035)	MRPS36 (ENSCJPG00005008037)	CENPH (ENSCJPG00005008038)	SLC30A5 (ENSCJPG00005008039)	PIK3R1 (ENSCJPG00005008055)	CD180 (ENSCJPG00005008077)	MAST4 (ENSCJPG00005008080)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.b #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00960000190052	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183
Golden eagle	MODERN SPECIES	91	F2RL2 (ENSACCG00020011007)	F2R (ENSACCG00020011014)	F2RL1 (ENSACCG00020011018)	S100Z (ENSACCG00020011028)	CRHBP (ENSACCG00020011040)	AGGF1 (ENSACCG00020011059) #7	PDE8B (ENSACCG00020011101) #9	WDR41 (ENSACCG00020011137) #10	OTP (ENSACCG00020011154) #11	TBCA (ENSACCG00020011162) #14	AP3B1 (ENSACCG00020011192) #17	SCAMP1 (ENSACCG00020011232) #18	LHFPL2 (ENSACCG00020011242) #19	ARSB (ENSACCG00020011260)	DMGDH (ENSACCG00020011281) #21	ENSACCG00020011296 #22	JMY (ENSACCG00020011307) #27	HOMER1 (ENSACCG00020011321) #29	ENSACCG00020011331	TENT2 (ENSACCG00020011342)	ENSACCG00020011386 #31	MTX3 (ENSACCG00020011422) #32	ENSACCG00020012198	SERINC5 (ENSACCG00020012605) #36	CDK7 (ENSACCG00020012634)	MRPS36 (ENSACCG00020012659)	CENPH (ENSACCG00020012683)	CCNB1 (ENSACCG00020012714)	SLC30A5 (ENSACCG00020012770)	PIK3R1 (ENSACCG00020012891)	CD180 (ENSACCG00020012954)
Kakapo	MODERN SPECIES	19	F2RL2 (ENSSHBG00005010691)	F2R (ENSSHBG00005010723)	F2RL1 (ENSSHBG00005010738)	S100Z (ENSSHBG00005010751)	CRHBP (ENSSHBG00005010788)	AGGF1 (ENSSHBG00005010807) #7	PDE8B (ENSSHBG00005010892) #9	WDR41 (ENSSHBG00005011087) #10	OTP (ENSSHBG00005011114) #11	TBCA (ENSSHBG00005011141) #14	AP3B1 (ENSSHBG00005011362) #17	SCAMP1 (ENSSHBG00005012135) #18	LHFPL2 (ENSSHBG00005012173) #19	ARSB (ENSSHBG00005012188)	DMGDH (ENSSHBG00005012214) #21	ENSSHBG00005012228 #22	ENSSHBG00005012252 #27	ENSSHBG00005012268 #29	ENSSHBG00005012280	ENSSHBG00005012296	ENSSHBG00005012389 #31	ENSSHBG00005013277	MTX3 (ENSSHBG00005013284) #32	ENSSHBG00005013810	SERINC5 (ENSSHBG00005018865) #36	CDK7 (ENSSHBG00005018874)	MRPS36 (ENSSHBG00005018881)	CENPH (ENSSHBG00005018885)	CCNB1 (ENSSHBG00005018891)	SLC30A5 (ENSSHBG00005018900)	PIK3R1 (ENSSHBG00005018906)
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443.fb	ENSGT00390000009578	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247
Great tit	MODERN SPECIES	642	IQGAP2 (ENSPMJG00000016151)	F2R (ENSPMJG00000016150)	F2RL1 (ENSPMJG00000016149)	S100Z (ENSPMJG00000016148)	CRHBP (ENSPMJG00000016147)	PDE8B (ENSPMJG00000016145) #9	AGGF1 (ENSPMJG00000016144) #7	WDR41 (ENSPMJG00000016143) #10	OTP (ENSPMJG00000016142) #11	TBCA (ENSPMJG00000016141) #14	AP3B1 (ENSPMJG00000016140) #17	SCAMP1 (ENSPMJG00000016139) #18	LHFPL2 (ENSPMJG00000016138) #19	ARSB (ENSPMJG00000016137)	DMGDH (ENSPMJG00000016136) #21	ENSPMJG00000016135 #22	JMY (ENSPMJG00000016134) #27	HOMER1 (ENSPMJG00000016133) #29	TENT2 (ENSPMJG00000016132)	ENSPMJG00000016131 #31	MTX3 (ENSPMJG00000016130) #32	ENSPMJG00000016129	SERINC5 (ENSPMJG00000016128) #36	CDK7 (ENSPMJG00000016127)	MRPS36 (ENSPMJG00000016126)	CENPH (ENSPMJG00000016125)	SLC30A5 (ENSPMJG00000016124)	PIK3R1 (ENSPMJG00000016121)	MAST4 (ENSPMJG00000016119)	ENSPMJG00000016117	SREK1 (ENSPMJG00000016116)
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00940000170540	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443.fb	ENSGT00390000009578	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00940000170540	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443.fb	ENSGT00390000009578	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00730000110872.a
Medium ground finch	MODERN SPECIES	143	F2RL2 (ENSGFOG00000011362)	IQGAP2 (ENSGFOG00000010045)	F2R (ENSGFOG00000009977)	F2RL1 (ENSGFOG00000009974)	S100Z (ENSGFOG00000009967)	CRHBP (ENSGFOG00000009960)	AGGF1 (ENSGFOG00000009755) #7	PDE8B (ENSGFOG00000009122) #9	WDR41 (ENSGFOG00000009104) #10	ENSGFOG00000009093	AP3B1 (ENSGFOG00000009046) #17	ENSGFOG00000009028 #18	LHFPL2 (ENSGFOG00000009025) #19	ARSB (ENSGFOG00000009010)	DMGDH (ENSGFOG00000008906) #21	ENSGFOG00000008891 #22	JMY (ENSGFOG00000008880) #27	HOMER1 (ENSGFOG00000008874) #29	TENT2 (ENSGFOG00000008863)	ENSGFOG00000008794 #31	MTX3 (ENSGFOG00000008765) #32	ENSGFOG00000003264	SERINC5 (ENSGFOG00000003004) #36
Passeroidea	ANCESTRAL SPECIES	69												ENSGT00940000157310.a.a #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443.fb	ENSGT00390000009578	ENSGT00940000155754
Zebra finch	MODERN SPECIES	104	FRMD3 (ENSTGUG00000003203)	RASEF (ENSTGUG00000003216)	TLE1 (ENSTGUG00000003227)	TLE4 (ENSTGUG00000003264)	PSAT1 (ENSTGUG00000003373)	CEP78 (ENSTGUG00000003403)	ENSTGUG00000026918	VPS13A (ENSTGUG00000003433)	FOXB2 (ENSTGUG00000026524)	ENSTGUG00000003484	AP3B1 (ENSTGUG00000003895) #17	SCAMP1 (ENSTGUG00000003846) #18	LHFPL2 (ENSTGUG00000003844) #19	ARSB (ENSTGUG00000003818)	DMGDH (ENSTGUG00000003802) #21	ENSTGUG00000003783 #22	JMY (ENSTGUG00000003723) #27	HOMER1 (ENSTGUG00000003711) #29	TENT2 (ENSTGUG00000003674)	CMYA5 (ENSTGUG00000028894) #31	MTX3 (ENSTGUG00000003611) #32	ENSTGUG00000003565	SERINC5 (ENSTGUG00000003543) #36	ENSTGUG00000020535	GCNT1 (ENSTGUG00000003503)	TBCA (ENSTGUG00000003968)	RFK (ENSTGUG00000024019)	ENSTGUG00000020870	OTP (ENSTGUG00000024121) #11	WDR41 (ENSTGUG00000003972) #10	PDE8B (ENSTGUG00000003995) #9
Common canary	MODERN SPECIES	25	PDE8B (ENSSCAG00000005086) #9	WDR41 (ENSSCAG00000005134) #10	TBCA (ENSSCAG00000005139) #14	AP3B1 (ENSSCAG00000005147) #17	MTX3 (ENSSCAG00000005156) #32	ENSSCAG00000005348	SERINC5 (ENSSCAG00000006465) #36	CDK7 (ENSSCAG00000006471)	ENSSCAG00000006477	CENPH (ENSSCAG00000006479)	SLC30A5 (ENSSCAG00000006486)	ENSSCAG00000006494 #18	LHFPL2 (ENSSCAG00000006502) #19	ARSB (ENSSCAG00000006510)	DMGDH (ENSSCAG00000006600) #21	ENSSCAG00000006897 #22	JMY (ENSSCAG00000006908) #27	HOMER1 (ENSSCAG00000006944) #29	TENT2 (ENSSCAG00000006949)	ENSSCAG00000006955	ENSSCAG00000007021 #31
Flycatcher	MODERN SPECIES	561	F2RL2 (ENSFALG00000026321)	IQGAP2 (ENSFALG00000010034)	F2R (ENSFALG00000010030)	F2RL1 (ENSFALG00000014541)	S100Z (ENSFALG00000028933)	CRHBP (ENSFALG00000010024)	AGGF1 (ENSFALG00000010018) #7	PDE8B (ENSFALG00000010015) #9	WDR41 (ENSFALG00000010010) #10	TBCA (ENSFALG00000027625) #14	AP3B1 (ENSFALG00000009993) #17	SCAMP1 (ENSFALG00000009973) #18	LHFPL2 (ENSFALG00000025830) #19	ARSB (ENSFALG00000027321)	DMGDH (ENSFALG00000009949) #21	ENSFALG00000026736 #22	JMY (ENSFALG00000009914) #27	HOMER1 (ENSFALG00000009906) #29	TENT2 (ENSFALG00000009901)	ENSFALG00000023211 #31	MTX3 (ENSFALG00000026113) #32	ENSFALG00000009878	ENSFALG00000009875 #36	CDK7 (ENSFALG00000009871)	MRPS36 (ENSFALG00000009866)	CENPH (ENSFALG00000009863)	SLC30A5 (ENSFALG00000009851)	PIK3R1 (ENSFALG00000009849)	MAST4 (ENSFALG00000009844)	ENSFALG00000009839	SREK1 (ENSFALG00000009835)
African ostrich	MODERN SPECIES	1070	F2RL2 (ENSSCUG00000012855)	F2R (ENSSCUG00000012856)	F2RL1 (ENSSCUG00000012858)	S100Z (ENSSCUG00000012861)	CRHBP (ENSSCUG00000012866)	AGGF1 (ENSSCUG00000012874) #7	PDE8B (ENSSCUG00000012877) #9	WDR41 (ENSSCUG00000012878) #10	TBCA (ENSSCUG00000012882) #14	ENSSCUG00000012883	AP3B1 (ENSSCUG00000012886) #17	SCAMP1 (ENSSCUG00000012902) #18	LHFPL2 (ENSSCUG00000012905) #19	ARSB (ENSSCUG00000012909)	DMGDH (ENSSCUG00000012911) #21	ENSSCUG00000012912 #22	JMY (ENSSCUG00000012913) #27	HOMER1 (ENSSCUG00000012916) #29	ENSSCUG00000012918	TENT2 (ENSSCUG00000012921)	ENSSCUG00000012926 #31	ENSSCUG00000012928 #31	MTX3 (ENSSCUG00000012930) #32	ENSSCUG00000012934	SERINC5 (ENSSCUG00000012936) #36	CDK7 (ENSSCUG00000012940)	MRPS36 (ENSSCUG00000012944)	CENPH (ENSSCUG00000012945)	CCNB1 (ENSSCUG00000012951)	SLC30A5 (ENSSCUG00000012970)	PIK3R1 (ENSSCUG00000012982)
Australian saltwater crocodile	MODERN SPECIES	29	IQGAP2 (ENSCPRG00005000163)	F2R (ENSCPRG00005000123)	F2RL1 (ENSCPRG00005000107)	S100Z (ENSCPRG00005017455)	CRHBP (ENSCPRG00005017451)	AGGF1 (ENSCPRG00005017448) #7	PDE8B (ENSCPRG00005017420) #9	WDR41 (ENSCPRG00005017397) #10	OTP (ENSCPRG00005017395) #11	TBCA (ENSCPRG00005017393) #14	AP3B1 (ENSCPRG00005017376) #17	SCAMP1 (ENSCPRG00005017372) #18	LHFPL2 (ENSCPRG00005017371) #19	ARSB (ENSCPRG00005017367)	DMGDH (ENSCPRG00005017362) #21	ENSCPRG00005017356 #22	JMY (ENSCPRG00005017344) #27	HOMER1 (ENSCPRG00005017334) #29	TENT2 (ENSCPRG00005017326)	MTX3 (ENSCPRG00005017318) #32	ENSCPRG00005017314	SERINC5 (ENSCPRG00005017311) #36	CDK7 (ENSCPRG00005017305)	CENPH (ENSCPRG00005017297)	CCNB1 (ENSCPRG00005017292)	SLC30A5 (ENSCPRG00005017288)	PIK3R1 (ENSCPRG00005017279)	ENSCPRG00005017272	MAST4 (ENSCPRG00005017252)	SREK1 (ENSCPRG00005017242)	ERBIN (ENSCPRG00005017239)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354.c #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354.c #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Emydidae	ANCESTRAL SPECIES	7	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354.c #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Three-toed box turtle	MODERN SPECIES	29	IQGAP2 (ENSTMTG00000010288)	F2R (ENSTMTG00000010274)	F2RL1 (ENSTMTG00000010266)	S100Z (ENSTMTG00000010247)	CRHBP (ENSTMTG00000010221)	AGGF1 (ENSTMTG00000010202) #7	PDE8B (ENSTMTG00000010141) #9	WDR41 (ENSTMTG00000010122) #10	OTP (ENSTMTG00000019954) #11	TBCA (ENSTMTG00000019947) #14	AP3B1 (ENSTMTG00000019939) #17	SCAMP1 (ENSTMTG00000019932) #18	LHFPL2 (ENSTMTG00000019928) #19	ARSB (ENSTMTG00000019924)	DMGDH (ENSTMTG00000019910) #21	ENSTMTG00000019899 #22	JMY (ENSTMTG00000019893) #27	HOMER1 (ENSTMTG00000019867) #29	ENSTMTG00000019855	TENT2 (ENSTMTG00000019839)	MTX3 (ENSTMTG00000019808) #32	ENSTMTG00000019786	SERINC5 (ENSTMTG00000019769) #36	CDK7 (ENSTMTG00000019757)	MRPS36 (ENSTMTG00000019744)	CCNB1 (ENSTMTG00000019722)	SLC30A5 (ENSTMTG00000019696)	PIK3R1 (ENSTMTG00000019667)	CD180 (ENSTMTG00000019628)	ENSTMTG00000019575	ENSTMTG00000019557
painted turtle	MODERN SPECIES	918													ENSCPBG00000027669 #19	ARSB (ENSCPBG00000027666)	DMGDH (ENSCPBG00000027638) #21	ENSCPBG00000027606 #22	JMY (ENSCPBG00000027602) #27	HOMER1 (ENSCPBG00000027596) #29	TENT2 (ENSCPBG00000027590)	ENSCPBG00000027574 #31	MTX3 (ENSCPBG00000027567) #32	ENSCPBG00000027563	SERINC5 (ENSCPBG00000027559) #36
Testudinidae	ANCESTRAL SPECIES	15	ENSGT01050000244840.A.b.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354.c #29	ENSGT00940000156354.d #29	ENSGT00940000156640	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Abingdon island giant tortoise	MODERN SPECIES	631															ENSCABG00000011962 #21	ENSCABG00000011963 #22	JMY (ENSCABG00000011971) #27	ENSCABG00000011992 #29
Goode s thornscrub tortoise	MODERN SPECIES	20	F2RL2 (ENSGEVG00005017004)	F2R (ENSGEVG00005017019)	F2RL1 (ENSGEVG00005017035)	S100Z (ENSGEVG00005017053)	CRHBP (ENSGEVG00005017082)	AGGF1 (ENSGEVG00005017135) #7	PDE8B (ENSGEVG00005017191) #9	WDR41 (ENSGEVG00005017322) #10	OTP (ENSGEVG00005017397) #11	TBCA (ENSGEVG00005017424) #14	AP3B1 (ENSGEVG00005017453) #17	SCAMP1 (ENSGEVG00005017551) #18	LHFPL2 (ENSGEVG00005017571) #19	ARSB (ENSGEVG00005017597)	DMGDH (ENSGEVG00005017878) #21	ENSGEVG00005019199 #22	JMY (ENSGEVG00005019239) #27	ENSGEVG00005019265 #29	HOMER1 (ENSGEVG00005019288) #29	TENT2 (ENSGEVG00005019320)	MTX3 (ENSGEVG00005019349) #32	ENSGEVG00005019363	SERINC5 (ENSGEVG00005019431) #36	CDK7 (ENSGEVG00005019457)	MRPS36 (ENSGEVG00005019466)	CENPH (ENSGEVG00005019470)	CCNB1 (ENSGEVG00005019515)	PIK3R1 (ENSGEVG00005019621)	CD180 (ENSGEVG00005019694)	MAST4 (ENSGEVG00005019783)	ENSGEVG00005019977
Chinese turtle	MODERN SPECIES	769	F2R (ENSPSIG00000013235)	F2RL1 (ENSPSIG00000000941)	S100Z (ENSPSIG00000013240)	CRHBP (ENSPSIG00000013255)	AGGF1 (ENSPSIG00000014397) #7	PDE8B (ENSPSIG00000014953) #9	WDR41 (ENSPSIG00000015621) #10	OTP (ENSPSIG00000015830) #11	TBCA (ENSPSIG00000015832) #14	AP3B1 (ENSPSIG00000015957) #17	SCAMP1 (ENSPSIG00000005353) #18	LHFPL2 (ENSPSIG00000006003) #19	ARSB (ENSPSIG00000006010)	ENSPSIG00000000958	DMGDH (ENSPSIG00000006338) #21	ENSPSIG00000006482 #22	JMY (ENSPSIG00000007866) #27	HOMER1 (ENSPSIG00000008043) #29	TENT2 (ENSPSIG00000009075)	MTX3 (ENSPSIG00000009140) #32	ENSPSIG00000009194	SERINC5 (ENSPSIG00000009368) #36	CDK7 (ENSPSIG00000010079)	ENSPSIG00000010407	CCNB1 (ENSPSIG00000010545)	SLC30A5 (ENSPSIG00000010552)	ENSPSIG00000010583	PIK3R1 (ENSPSIG00000010609)	CD180 (ENSPSIG00000011634)	MAST4 (ENSPSIG00000011746)	ENSPSIG00000012012
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
tuatara	MODERN SPECIES	710															ENSSPUG00000002413 #21	ENSSPUG00000002431 #22
Episquamata	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Laterata	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00940000170540	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000167074	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Common wall lizard	MODERN SPECIES	2	CRHBP (ENSPMRG00000016936)	AGGF1 (ENSPMRG00000016929) #7	PDE8B (ENSPMRG00000016915) #9	WDR41 (ENSPMRG00000016907) #10	OTP (ENSPMRG00000016904) #11	ENSPMRG00000016902	TBCA (ENSPMRG00000016895) #14	ENSPMRG00000016887	ENSPMRG00000016877 #17	ENSPMRG00000016558 #17	SCAMP1 (ENSPMRG00000016489) #18	ENSPMRG00000016483	LHFPL2 (ENSPMRG00000016477) #19	ARSB (ENSPMRG00000016472)	DMGDH (ENSPMRG00000016457) #21	ENSPMRG00000016449 #22	JMY (ENSPMRG00000016420) #27	HOMER1 (ENSPMRG00000016406) #29	ENSPMRG00000016399	TENT2 (ENSPMRG00000016386)	ENSPMRG00000016328 #31	MTX3 (ENSPMRG00000016311) #32	ENSPMRG00000016301	SERINC5 (ENSPMRG00000016294) #36	CDK7 (ENSPMRG00000016263)	MRPS36 (ENSPMRG00000016251)	CCNB1 (ENSPMRG00000016242)	SLC30A5 (ENSPMRG00000016222)	ENSPMRG00000016214	PIK3R1 (ENSPMRG00000016197)	CD180 (ENSPMRG00000016191)
Argentine black and white tegu	MODERN SPECIES	10	ENSSMRG00000003010	F2RL1 (ENSSMRG00000003003)	S100Z (ENSSMRG00000002998)	CRHBP (ENSSMRG00000002991)	AGGF1 (ENSSMRG00000002967) #7	PDE8B (ENSSMRG00000002916) #9	WDR41 (ENSSMRG00000002897) #10	OTP (ENSSMRG00000002889) #11	ENSSMRG00000002745	ENSSMRG00000002743	AP3B1 (ENSSMRG00000002658) #17	SCAMP1 (ENSSMRG00000002646) #18	LHFPL2 (ENSSMRG00000002636) #19	ARSB (ENSSMRG00000002586)	DMGDH (ENSSMRG00000002569) #21	ENSSMRG00000002563 #22	JMY (ENSSMRG00000002543) #27	HOMER1 (ENSSMRG00000002536) #29	TENT2 (ENSSMRG00000002522)	ENSSMRG00000001128 #31	MTX3 (ENSSMRG00000001104) #32	ENSSMRG00000001089	SERINC5 (ENSSMRG00000001077) #36	CDK7 (ENSSMRG00000001064)	MRPS36 (ENSSMRG00000001061)	CENPH (ENSSMRG00000001059)	CCNB1 (ENSSMRG00000001055)	SLC30A5 (ENSSMRG00000001022)	PIK3R1 (ENSSMRG00000000925)	CD180 (ENSSMRG00000000711)	MAST4 (ENSSMRG00000000438)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT00390000010652.D.b	ENSGT00940000159238.b.d.a	ENSGT00390000008279.b	ENSGT00940000156569.a.b	ENSGT00940000166035	ENSGT00940000153593.c.a	ENSGT00940000161332	ENSGT00940000162457	ENSGT00940000159258
Elapidae	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT00390000010652.D.b	ENSGT00940000159238.b.d.a	ENSGT00390000008279.b	ENSGT00940000156569.a.b	ENSGT00940000166035	ENSGT00940000153593.c.a	ENSGT00940000161332	ENSGT00940000162457	ENSGT00940000159258
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.fb #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a.d #36	ENSGT00390000010652.D.b	ENSGT00940000159238.b.d.a	ENSGT00390000008279.b	ENSGT00940000156569.a.b	ENSGT00940000166035	ENSGT00940000153593.c.a	ENSGT00940000161332	ENSGT00940000162457
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b.i	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710.fb #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a.d #36	ENSGT00390000010652.D.b	ENSGT00940000159238.b.d.a	ENSGT00390000008279.b	ENSGT00940000156569.a.b	ENSGT00940000166035	ENSGT00940000153593.c.a	ENSGT00940000161332	ENSGT00940000162457
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	33	ENSNSUG00000008166	ENSNSUG00000008165	F2RL1 (ENSNSUG00000008164)	S100Z (ENSNSUG00000008153)	CRHBP (ENSNSUG00000008150)	AGGF1 (ENSNSUG00000008042) #7	PDE8B (ENSNSUG00000007470) #9	ENSNSUG00000007467 #10	OTP (ENSNSUG00000007466) #11	ENSNSUG00000007432 #14	AP3B1 (ENSNSUG00000007370) #17	SCAMP1 (ENSNSUG00000007366) #18	LHFPL2 (ENSNSUG00000007360) #19	ARSB (ENSNSUG00000007357)	DMGDH (ENSNSUG00000007356) #21	ENSNSUG00000007351 #22	JMY (ENSNSUG00000007346) #27	HOMER1 (ENSNSUG00000007342) #29	TENT2 (ENSNSUG00000007340)	ENSNSUG00000007222 #31	MTX3 (ENSNSUG00000007207) #32	ENSNSUG00000007206 #34	SERINC5 (ENSNSUG00000007170) #36	CDK7 (ENSNSUG00000007132)	MRPS36 (ENSNSUG00000007130)	CCNB1 (ENSNSUG00000007129)	SLC30A5 (ENSNSUG00000006947)	PIK3R1 (ENSNSUG00000006761)	CD180 (ENSNSUG00000006736)	ENSNSUG00000006735	ENSNSUG00000006733
Mainland tiger snake	MODERN SPECIES	106				ENSNSUG00000008394	ENSNSUG00000008393	CACNA1C (ENSNSUG00000008392)	IL17RA (ENSNSUG00000008370)	HDHD5 (ENSNSUG00000008368)	ADA2 (ENSNSUG00000008367)	CECR2 (ENSNSUG00000008313)	ENSNSUG00000008312	ENSNSUG00000008311	ENSNSUG00000008310	ENSNSUG00000008309	ENSNSUG00000008308	ENSNSUG00000008307 #22	ENSNSUG00000008306	ENSNSUG00000008305	PEX26 (ENSNSUG00000008304)	ENSNSUG00000008302	ENSNSUG00000008298	USP18 (ENSNSUG00000008297)	ENSNSUG00000008223	BPGM (ENSNSUG00000008222)	CALD1 (ENSNSUG00000008219)	ENSNSUG00000008218	ENSNSUG00000008217	RERG (ENSNSUG00000008216)	ENSNSUG00000008215	PTPRO (ENSNSUG00000008214)	EPS8 (ENSNSUG00000008213)
Eastern brown snake	MODERN SPECIES	2	ENSPTXG00000002587	ENSPTXG00000002586	F2RL1 (ENSPTXG00000002584)	S100Z (ENSPTXG00000002582)	CRHBP (ENSPTXG00000002580)	AGGF1 (ENSPTXG00000002575) #7	PDE8B (ENSPTXG00000002569) #9	WDR41 (ENSPTXG00000002565) #10	OTP (ENSPTXG00000002560) #11	TBCA (ENSPTXG00000002558) #14	AP3B1 (ENSPTXG00000002552) #17	SCAMP1 (ENSPTXG00000002548) #18	LHFPL2 (ENSPTXG00000002546) #19	ARSB (ENSPTXG00000002543)	DMGDH (ENSPTXG00000002538) #21	ENSPTXG00000002535 #22	JMY (ENSPTXG00000002530) #27	HOMER1 (ENSPTXG00000002526) #29	TENT2 (ENSPTXG00000002511)	ENSPTXG00000002415 #31	MTX3 (ENSPTXG00000002412) #32	ENSPTXG00000002410	SERINC5 (ENSPTXG00000002407) #36	CDK7 (ENSPTXG00000002404)	MRPS36 (ENSPTXG00000002401)	CCNB1 (ENSPTXG00000002399)	SLC30A5 (ENSPTXG00000002398)	PIK3R1 (ENSPTXG00000002397)	CD180 (ENSPTXG00000002339)	MAST4 (ENSPTXG00000000732)	SREK1 (ENSPTXG00000000653)
Blue-lipped sea krait	MODERN SPECIES	2790															DMGDH (ENSLLTG00000011454) #21	ENSLLTG00000011426 #22
Indian cobra	MODERN SPECIES	1	S100Z (ENSNNAG00000003790)	CRHBP (ENSNNAG00000003821)	AGGF1 (ENSNNAG00000003959) #7	ENSNNAG00000004588 #13	PDE8B (ENSNNAG00000004615) #9	WDR41 (ENSNNAG00000004669) #10	OTP (ENSNNAG00000004735) #11	TBCA (ENSNNAG00000004751) #14	AP3B1 (ENSNNAG00000004770) #17	SCAMP1 (ENSNNAG00000004867) #18	LHFPL2 (ENSNNAG00000004879) #19	ENSNNAG00000004894	ENSNNAG00000004946	DMGDH (ENSNNAG00000004972) #21	ENSNNAG00000005025 #21	ENSNNAG00000005034 #22	JMY (ENSNNAG00000005055) #27	HOMER1 (ENSNNAG00000005204) #29	TENT2 (ENSNNAG00000005259)	ENSNNAG00000005324 #31	MTX3 (ENSNNAG00000005360) #32	ENSNNAG00000005380	SERINC5 (ENSNNAG00000005536) #36	CDK7 (ENSNNAG00000005593)	MRPS36 (ENSNNAG00000005624)	CCNB1 (ENSNNAG00000005641)	SLC30A5 (ENSNNAG00000005794)	PIK3R1 (ENSNNAG00000006278)	CD180 (ENSNNAG00000006344)	MAST4 (ENSNNAG00000006377)	ENSNNAG00000006397
Lizard	MODERN SPECIES	1	ENSACAG00000037420	F2RL1 (ENSACAG00000007980)	S100Z (ENSACAG00000036691)	CRHBP (ENSACAG00000007916)	AGGF1 (ENSACAG00000007847) #7	PDE8B (ENSACAG00000007748) #9	WDR41 (ENSACAG00000007717) #10	OTP (ENSACAG00000030602) #11	tbca (ENSACAG00000035436) #14	AP3B1 (ENSACAG00000007430) #17	SCAMP1 (ENSACAG00000012476) #18	LHFPL2 (ENSACAG00000012574) #19	ENSACAG00000040664	ARSB (ENSACAG00000016838)	DMGDH (ENSACAG00000016799) #21	ENSACAG00000016768 #22	JMY (ENSACAG00000016753) #27	HOMER1 (ENSACAG00000016736) #29	TENT2 (ENSACAG00000016683)	ENSACAG00000016641 #31	ENSACAG00000040427	MTX3 (ENSACAG00000016636) #32	ENSACAG00000016545	ENSACAG00000016493 #36	CDK7 (ENSACAG00000016452)	CENPH (ENSACAG00000016440)	CCNB1 (ENSACAG00000016419)	SLC30A5 (ENSACAG00000016363)	ENSACAG00000037679	PIK3R1 (ENSACAG00000016290)	CD180 (ENSACAG00000016275)
Anura	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000161125	ENSGT00390000001362	ENSGT00730000111121 #7	ENSGT01100000264050	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00390000017443	ENSGT00390000009578	ENSGT00940000154586.b	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399
Frog	MODERN SPECIES		f2rl1 (ENSXETG00000001420)	ENSXETG00000043113	crhbp (ENSXETG00000017080)	s100z (ENSXETG00000017078)	ENSXETG00000047318	aggf1 (ENSXETG00000017077) #7	pde8b (ENSXETG00000017075) #9	wdr41 (ENSXETG00000017074) #10	otp (ENSXETG00000035719) #11	tbca (ENSXETG00000016574) #14	ap3b1 (ENSXETG00000030391) #17	scamp1 (ENSXETG00000000547) #18	lhfpl2 (ENSXETG00000044028) #19	arsb (ENSXETG00000045303)	dmgdh (ENSXETG00000000527) #21	bhmt (ENSXETG00000000523) #22	ENSXETG00000046595	jmy (ENSXETG00000000520) #27	homer1 (ENSXETG00000000519) #29	tent2 (ENSXETG00000000518)	ENSXETG00000040327 #31	mtx3 (ENSXETG00000000510) #32	thbs4 (ENSXETG00000000500) #34	serinc5 (ENSXETG00000000484) #36	ENSXETG00000046275	cdk7 (ENSXETG00000000481)	ENSXETG00000046139	ENSXETG00000042052	cenph (ENSXETG00000030572)	ENSXETG00000044384	ccnb1 (ENSXETG00000000477)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000018821	ENSLLEG00000018804	PDE8B (ENSLLEG00000018182) #9	WDR41 (ENSLLEG00000018088) #10	OTP (ENSLLEG00000018020) #11	TBCA (ENSLLEG00000017966) #14	ENSLLEG00000017928	AP3B1 (ENSLLEG00000016817) #17	ENSLLEG00000016758	SCAMP1 (ENSLLEG00000016533) #18	ENSLLEG00000016488	LHFPL2 (ENSLLEG00000016448) #19	ENSLLEG00000016417	ARSB (ENSLLEG00000016283)	ENSLLEG00000016254	ENSLLEG00000015178 #22	DMGDH (ENSLLEG00000014286) #21	JMY (ENSLLEG00000014168) #27	HOMER1 (ENSLLEG00000013917) #29	TENT2 (ENSLLEG00000013728)	ENSLLEG00000013699	ENSLLEG00000013548 #31	MTX3 (ENSLLEG00000013473) #32	ENSLLEG00000004177	ENSLLEG00000004174	ENSLLEG00000004171	THBS4 (ENSLLEG00000004155) #34	SERINC5 (ENSLLEG00000004144) #36	CDK7 (ENSLLEG00000004131)	MRPS36 (ENSLLEG00000004122)	CENPH (ENSLLEG00000004101)
Coelacanth	MODERN SPECIES	296															DMGDH (ENSLACG00000018080) #21	bhmt (ENSLACG00000018054) #22	RAB3C (ENSLACG00000017812)	PDE4D (ENSLACG00000017682)	ENSLACG00000017599	ENSLACG00000015922	ENSLACG00000015793	DEPDC1B (ENSLACG00000014301)	ELOVL7 (ENSLACG00000014004)	ENSLACG00000013634	ERCC8 (ENSLACG00000013022)	NDUFAF2 (ENSLACG00000012276)	ZSWIM6 (ENSLACG00000008415)	ENSLACG00000000986
Actinopterygii	ANCESTRAL SPECIES	45	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463
Neopterygii	ANCESTRAL SPECIES	26	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.a.a	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952 #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122 #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227 #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00940000175463
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a #22	ENSGT00510000046704.b.a #27	ENSGT00940000156354 #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT01090000260661	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Osteoglossiformes	ANCESTRAL SPECIES	83	ENSGT01050000244840.A.a.b.h	ENSGT01050000244840.A.a.a.h.a	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.j #18	ENSGT00990000203589.b.b.d #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a #22	ENSGT00510000046704.b.a.e #27	ENSGT00940000156354.m #29	ENSGT00940000156640	ENSGT00940000155227.a #34	ENSGT01030000234623.a.b.a.f #36	ENSGT00940000158784.v	ENSGT00390000018729.a.e.h	ENSGT00940000156090.a	ENSGT01000000214630	ENSGT00900000141071.a.a	ENSGT01030000234539.a.a.b.b	ENSGT00940000160028	ENSGT00440000033872.d	ENSGT00390000008802.a.a	ENSGT00940000155290.C.x
P. kingsleyae	MODERN SPECIES	2	f2rl1.2 (ENSPKIG00000018301)	ch25hl2 (ENSPKIG00000018280)	ENSPKIG00000018266	s100z (ENSPKIG00000018247)	crhbp (ENSPKIG00000018218)	aggf1 (ENSPKIG00000018193) #7	PDE8B (ENSPKIG00000018112) #9	wdr41 (ENSPKIG00000018046) #10	otpa (ENSPKIG00000018024) #11	tbca (ENSPKIG00000018004) #14	AP3B1 (ENSPKIG00000017939) #17	SCAMP1 (ENSPKIG00000017903) #18	lhfpl2a (ENSPKIG00000017855) #19	ARSB (ENSPKIG00000017800)	DMGDH (ENSPKIG00000017764) #21	bhmt (ENSPKIG00000017692) #22	JMY (ENSPKIG00000017638) #27	homer1b (ENSPKIG00000017568) #29	tent2 (ENSPKIG00000017504)	thbs4b (ENSPKIG00000017424) #34	serinc5 (ENSPKIG00000017366) #36	SETBP1 (ENSPKIG00000017335)	ENSPKIG00000017306	dnajb5 (ENSPKIG00000017272)	ENSPKIG00000017266	hwa (ENSPKIG00000017253)	vcp (ENSPKIG00000017173)	pias2 (ENSPKIG00000017057)	ENSPKIG00000016979	npr3 (ENSPKIG00000016941)	sub1b (ENSPKIG00000016923)
Asian bonytongue	MODERN SPECIES	21	f2rl1.1 (ENSSFOG00015016419)	ch25hl2 (ENSSFOG00015028366)	ENSSFOG00015016427	s100z (ENSSFOG00015016441)	crhbp (ENSSFOG00015016445)	aggf1 (ENSSFOG00015016459) #7	PDE8B (ENSSFOG00015016473) #9	wdr41 (ENSSFOG00015016506) #10	otpa (ENSSFOG00015016563) #11	tbca (ENSSFOG00015030159) #14	AP3B1 (ENSSFOG00015016624) #17	SCAMP1 (ENSSFOG00015016716) #18	lhfpl2a (ENSSFOG00015031014) #19	ARSB (ENSSFOG00015016765)	DMGDH (ENSSFOG00015016787) #21	bhmt (ENSSFOG00015016840) #22	JMY (ENSSFOG00015016891) #27	homer1b (ENSSFOG00015016907) #29	tent2 (ENSSFOG00015016954)	thbs4b (ENSSFOG00015016974) #34	serinc5 (ENSSFOG00015017025) #36	SETBP1 (ENSSFOG00015017063)	dnajb5 (ENSSFOG00015017075)	hwa (ENSSFOG00015025358)	vcp (ENSSFOG00015017111)	pias2 (ENSSFOG00015017181)	ENSSFOG00015026815	npr3 (ENSSFOG00015017270)	sub1b (ENSSFOG00015031985)	ZFR (ENSSFOG00015017300)	mtmr12 (ENSSFOG00015017341)
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	160	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867
Otomorpha	ANCESTRAL SPECIES	17	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000159243	ENSGT00940000155640.b	ENSGT00940000154396.a	ENSGT00390000002955	ENSGT00530000063839	ENSGT00390000009531	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00940000166601	ENSGT00940000157066.p	ENSGT00390000018845.e	ENSGT00940000156411
Clupeiformes	ANCESTRAL SPECIES	12	ENSGT00530000063672.b	ENSGT00730000110989.c.a	ENSGT00940000155771.c	ENSGT00940000154290.b	ENSGT00390000012355.A.a.a.b	ENSGT00940000155679.d	ENSGT00950000182772.B.a.a	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310 #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000159243	ENSGT00940000155640.b	ENSGT00940000154396.a	ENSGT00390000000375	ENSGT00390000002955	ENSGT00530000063839	ENSGT00390000009531	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00940000166601	ENSGT00940000157066.p	ENSGT00390000018845.e
Denticle herring	MODERN SPECIES	13	f2rl1.2 (ENSDCDG00000027284)	ch25hl2 (ENSDCDG00000027283)	s100z (ENSDCDG00000027282)	crhbp (ENSDCDG00000027281)	aggf1 (ENSDCDG00000027278) #7	ENSDCDG00000027275	PDE8B (ENSDCDG00000027214) #9	wdr41 (ENSDCDG00000027205) #10	otpa (ENSDCDG00000027203) #11	tbca (ENSDCDG00000027202) #14	AP3B1 (ENSDCDG00000020440) #17	scamp1 (ENSDCDG00000020319) #18	lhfpl2a (ENSDCDG00000020317) #19	ARSB (ENSDCDG00000020316)	DMGDH (ENSDCDG00000018398) #21	bhmt (ENSDCDG00000018312) #22	JMY (ENSDCDG00000018277) #27	HOMER1 (ENSDCDG00000018077) #29	DTWD2 (ENSDCDG00000018065)	stard4 (ENSDCDG00000018062)	jak2a (ENSDCDG00000017853)	rln1 (ENSDCDG00000017828)	plgrkt (ENSDCDG00000017824)	ENSDCDG00000017819	RIC1 (ENSDCDG00000016468)	ERMP1 (ENSDCDG00000016428)	MLANA (ENSDCDG00000016424)	KIAA2026 (ENSDCDG00000016419)	UHRF2 (ENSDCDG00000016272)	oaz1b (ENSDCDG00000016243)	PRAG1 (ENSDCDG00000016238)
Atlantic herring	MODERN SPECIES	3			ENSCHAG00000007553	ENSCHAG00000007572	ENSCHAG00000007613	f2rl1.2 (ENSCHAG00000007661)	ch25hl2 (ENSCHAG00000007670)	s100z (ENSCHAG00000007692)	aggf1 (ENSCHAG00000007708) #7	wdr41 (ENSCHAG00000007850) #10	ENSCHAG00000007860	ARSB (ENSCHAG00000007889)	ARSB (ENSCHAG00000007970)	scamp1 (ENSCHAG00000008150) #18	tbca (ENSCHAG00000008227) #14	bhmt (ENSCHAG00000008253) #22	JMY (ENSCHAG00000008365) #27	HOMER1 (ENSCHAG00000008500) #29	DTWD2 (ENSCHAG00000008583)	jak2a (ENSCHAG00000008676)	rln1 (ENSCHAG00000011415)	RIC1 (ENSCHAG00000011451)	ERMP1 (ENSCHAG00000012730)	ENSCHAG00000013305	KIAA2026 (ENSCHAG00000013322)	UHRF2 (ENSCHAG00000013421)	ENSCHAG00000013789	oaz1b (ENSCHAG00000013807)	ENSCHAG00000013951	ENSCHAG00000013995	ENSCHAG00000014013
Otophysi	ANCESTRAL SPECIES	278	ENSGT00390000009531	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00940000166601	ENSGT00940000157066.p	ENSGT00390000018845.e	ENSGT00940000156411	ENSGT00390000012078.b	ENSGT00940000156229	ENSGT00950000183175.B.b	ENSGT00940000166449	ENSGT00390000017459	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29
Characiphysae	ANCESTRAL SPECIES	79						ENSGT00940000156340.a.d	ENSGT00940000158002	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b	ENSGT00940000178986	ENSGT00940000159814	ENSGT01050000244887.A.b.b	ENSGT00950000182870.a.a.a.b	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00950000182971.C.pc.a	ENSGT00940000159594	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000161373	ENSGT00940000158581	ENSGT00940000155301.a	ENSGT01030000234535.E.d	ENSGT00950000183103.d.a.b	ENSGT00390000016258	ENSGT00390000014467	ENSGT00390000013620
Channel catfish	MODERN SPECIES	9	vps29 (ENSIPUG00000013313)	cel (ENSIPUG00000013351)	zgc:92275 (ENSIPUG00000013424)	grin1a (ENSIPUG00000013467)	ENTPD2 (ENSIPUG00000013795)	smarcb1 (ENSIPUG00000013824)	mmp11 (ENSIPUG00000013850)	atp8b1 (ENSIPUG00000013880)	dym (ENSIPUG00000013952)	smad7 (ENSIPUG00000014015)	CTIF (ENSIPUG00000014050)	Zbtb7c (ENSIPUG00000014134)	S1PR3 (ENSIPUG00000014139)	SHC3 (ENSIPUG00000014141)	dmgdh (ENSIPUG00000014172) #21	bhmt (ENSIPUG00000014231) #22	jmy (ENSIPUG00000014252) #27	homer1 (ENSIPUG00000014282) #29	cks2 (ENSIPUG00000014370)	sema4d (ENSIPUG00000014423)	ENSIPUG00000014532	CERT1 (ENSIPUG00000014574)	hmgcrb (ENSIPUG00000014685)	ENSIPUG00000014745	ENSIPUG00000014765	ENSIPUG00000014769	ENSIPUG00000014774	add1 (ENSIPUG00000014797)	WDR7 (ENSIPUG00000014970)	ST8SIA3 (ENSIPUG00000015054)	onecut2 (ENSIPUG00000015070)
Characiphysae_b	ANCESTRAL SPECIES	86						ENSGT00940000156340.a.d	ENSGT00940000158002	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b	ENSGT00940000178986	ENSGT00940000159814	ENSGT01050000244887.A.b.b	ENSGT00950000182870.a.a.a.b	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00950000182971.C.pc.a	ENSGT00940000159594	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000161373	ENSGT00940000158581	ENSGT00940000155301.a	ENSGT01030000234535.E.d	ENSGT00950000183103.d.a.b	ENSGT00390000016258	ENSGT00390000014467	ENSGT00390000013620
Characoidei	ANCESTRAL SPECIES	187	ENSGT00390000004458	ENSGT00940000156231.o.a	ENSGT00390000016856	ENSGT00940000158016.c.a.b	ENSGT01100000263542.B.b.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00940000158002	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b	ENSGT00940000159814	ENSGT01050000244887.A.b.b	ENSGT00950000182870.a.a.a.b	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00950000182971.C.pc.a	ENSGT00940000159594	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b
Red-bellied piranha	MODERN SPECIES	954																bhmt (ENSPNAG00000008553) #22	JMY (ENSPNAG00000008560) #27	HOMER1 (ENSPNAG00000008578) #29
Mexicana tetra	MODERN SPECIES	5	fech (ENSAMXG00000041094)	ONECUT2 (ENSAMXG00000031267)	st8sia3 (ENSAMXG00000015782)	WDR7 (ENSAMXG00000015805)	add1 (ENSAMXG00000015866)	ENSAMXG00000015897	ATP8B1 (ENSAMXG00000015912)	DYM (ENSAMXG00000035028)	smad7 (ENSAMXG00000039935)	ENSAMXG00000040364	CTIF (ENSAMXG00000015964)	ZBTB7C (ENSAMXG00000015988)	S1PR3 (ENSAMXG00000024840)	SHC3 (ENSAMXG00000033684)	DMGDH (ENSAMXG00000016019) #21	bhmt (ENSAMXG00000016035) #22	JMY (ENSAMXG00000016059) #27	HOMER1 (ENSAMXG00000016078) #29	zgc:86839 (ENSAMXG00000032988)	SEMA4D (ENSAMXG00000030262)	ENSAMXG00000016110	CERT1 (ENSAMXG00000016141)	hmgcrb (ENSAMXG00000016175)	smarcb1b (ENSAMXG00000038492)	MMP11 (ENSAMXG00000042400)	grin1a (ENSAMXG00000030727)	zgc:92275 (ENSAMXG00000016216)	cel.1 (ENSAMXG00000016230)	GTF3C5 (ENSAMXG00000016255)	ENSAMXG00000039092	vps29 (ENSAMXG00000030298)
Electric eel	MODERN SPECIES	76	cel.1 (ENSEEEG00000003754)	zgc:92275 (ENSEEEG00000003752)	grin1a (ENSEEEG00000003582)	ENTPD2 (ENSEEEG00000003554)	smarcb1b (ENSEEEG00000003506)	MMP11 (ENSEEEG00000003499)	ATP8B1 (ENSEEEG00000003495)	DYM (ENSEEEG00000003488)	smad7 (ENSEEEG00000003484)	CTIF (ENSEEEG00000003479)	ENSEEEG00000003477	ZBTB7C (ENSEEEG00000003475)	S1PR3 (ENSEEEG00000003474)	SHC3 (ENSEEEG00000003470)	DMGDH (ENSEEEG00000003103) #21	bhmt (ENSEEEG00000002951) #22	JMY (ENSEEEG00000002927) #27	HOMER1 (ENSEEEG00000002782) #29	zgc:86839 (ENSEEEG00000002774)	ENSEEEG00000002772	SEMA4D (ENSEEEG00000002770)	ENSEEEG00000002699	CERT1 (ENSEEEG00000001976)	hmgcrb (ENSEEEG00000001950)	ENSEEEG00000001949	ENSEEEG00000001948	add1 (ENSEEEG00000001944)	WDR7 (ENSEEEG00000001942)
Cyprinoidei	ANCESTRAL SPECIES	181		ENSGT00390000009531	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00940000166601	ENSGT00940000157066.p	ENSGT00390000018845.e	ENSGT00940000156411	ENSGT00390000012078.b	ENSGT00940000156229	ENSGT00940000166449	ENSGT00390000017459	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	861												ENSGT00390000017459.a	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29
Cyprininae_a	ANCESTRAL SPECIES	724														ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	2061														ARSB (ENSSGRG00000011291)	DMGDH (ENSSGRG00000011285) #21	bhmt (ENSSGRG00000011283) #22	JMY (ENSSGRG00000011282) #27	HOMER1 (ENSSGRG00000011276) #29	zer1 (ENSSGRG00000010452)	TBC1D13 (ENSSGRG00000010368)	ENSSGRG00000010366	RALGDS (ENSSGRG00000010365)
Golden-line barbel	MODERN SPECIES	4642																bhmt (ENSSGRG00000003522) #22
Common carp reference	MODERN SPECIES	38	ST8SIA3 (ENSCCRG00000060003)	WDR7 (ENSCCRG00000056871)	add1 (ENSCCRG00000026049)	ENSCCRG00000074907	ENSCCRG00000077644	ENSCCRG00000049214	ENSCCRG00000049201	TMEM38B (ENSCCRG00000077001)	ZNF462 (ENSCCRG00000064466)	RAD23B (ENSCCRG00000046888)	ENSCCRG00000035607	klf4 (ENSCCRG00000046905)	ARSB (ENSCCRG00000066183)	LHFPL2 (ENSCCRG00000062784) #19	DMGDH (ENSCCRG00000058708) #21	bhmt (ENSCCRG00000065069) #22	JMY (ENSCCRG00000063565) #27	ENSCCRG00000018744	ENSCCRG00000055387	ENSCCRG00000025041	plgrkt (ENSCCRG00000082850)	rln1 (ENSCCRG00000025047)	jak2a (ENSCCRG00000060024)	stard4 (ENSCCRG00000076701)	ENSCCRG00000069813	bxdc2 (ENSCCRG00000015805)	ENSCCRG00000025156	ENSCCRG00000043951	ENSCCRG00000058894	ENSCCRG00000059305	ENSCCRG00000062122
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2401				add1 (ENSCARG00000043605)	ENSCARG00000044128	oaz1b (ENSCARG00000047182)	ENSCARG00000047198	ENSCARG00000047221	ZNF462 (ENSCARG00000047248)	rad23b (ENSCARG00000047314)	klf4 (ENSCARG00000047367)	ENSCARG00000047419	lhfpl2a (ENSCARG00000047446) #19	ARSB (ENSCARG00000047462)	DMGDH (ENSCARG00000047554) #21	bhmt (ENSCARG00000050771) #22	ENSCARG00000050829 #27
Goldfish	MODERN SPECIES	2560														ARSB (ENSCARG00000038537)	DMGDH (ENSCARG00000038617) #21	bhmt (ENSCARG00000040662) #22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1624										rad23b (ENSCARG00000066170)	klf4 (ENSCARG00000066188)	ENSCARG00000066192	nop14 (ENSCARG00000066250)	ENSCARG00000067068	ENSCARG00000067071	bhmt (ENSCARG00000067092) #22
Goldfish	MODERN SPECIES	2359																bhmt (ENSCARG00000041453) #22	zer1 (ENSCARG00000041919)	ENSCARG00000043042	ENSCARG00000043054
Goldfish	MODERN SPECIES	2457											rad23b (ENSCARG00000061544)	klf4 (ENSCARG00000061570)	ENSCARG00000061580	ENSCARG00000061583	nop14 (ENSCARG00000061634)	bhmt (ENSCARG00000063139) #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00390000003122.a.a.a.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00390000003122.a.a.a.b #22
Common carp reference	MODERN SPECIES	45	ENSCCRG00000022743	ENSCCRG00000056590	ENSCCRG00000057866	ENSCCRG00000046851	ENSCCRG00000067573	ENSCCRG00000047625	TMEM38B (ENSCCRG00000002998)	ZNF462 (ENSCCRG00000071627)	ENSCCRG00000024396	RAD23B (ENSCCRG00000080999)	ENSCCRG00000035602	ENSCCRG00000019400	ENSCCRG00000058411	LHFPL2 (ENSCCRG00000075460) #19	DMGDH (ENSCCRG00000077157) #21	bhmt (ENSCCRG00000025140) #22	JMY (ENSCCRG00000066389) #27	ENSCCRG00000079919 #29	ENSCCRG00000018766	ENSCCRG00000043629	ENSCCRG00000025048	ENSCCRG00000015806	ENSCCRG00000077860	ENSCCRG00000071240	ENSCCRG00000067744	ENSCCRG00000081466	ENSCCRG00000080176
Golden-line barbel	MODERN SPECIES	3170																bhmt (ENSSGRG00000004812) #22
Zebrafish	MODERN SPECIES	13	lhfpl2a (ENSDARG00000009653) #19	plgrkt (ENSDARG00000100789)	rln1 (ENSDARG00000103762)	jak2a (ENSDARG00000104808)	stard4 (ENSDARG00000102477)	ENSDARG00000101873	bxdc2 (ENSDARG00000098935)	nup54 (ENSDARG00000103296)	ENSDARG00000111699	gsdf (ENSDARG00000075301)	klhl8 (ENSDARG00000101270)	ENSDARG00000100353 #31	zer1 (ENSDARG00000105123)	ARSB (ENSDARG00000108788)	DMGDH (ENSDARG00000025703) #21	bhmt (ENSDARG00000013430) #22	JMY (ENSDARG00000114796) #27
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000161183	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00940000170540	ENSGT00940000159952.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Tiger tail seahorse	MODERN SPECIES	209	dipk1b (ENSHCOG00000005998)	mrps2 (ENSHCOG00000005980)	ENSHCOG00000005970	ENSHCOG00000005963	ENSHCOG00000005950	dab2ipb (ENSHCOG00000005925)	fibcd1b (ENSHCOG00000005803)	ENSHCOG00000005784	ENSHCOG00000005777	aif1l (ENSHCOG00000005764)	prkaa1 (ENSHCOG00000005754)	scamp1 (ENSHCOG00000005740) #18	lhfpl2a (ENSHCOG00000005734) #19	ARSB (ENSHCOG00000005723)	DMGDH (ENSHCOG00000005714) #21	bhmt (ENSHCOG00000005680) #22	JMY (ENSHCOG00000005667) #27	HOMER1 (ENSHCOG00000005649) #29	DTWD2 (ENSHCOG00000005623)	tia1 (ENSHCOG00000005609)	C2orf42 (ENSHCOG00000005585)	ENSHCOG00000005582	TRAF2 (ENSHCOG00000005573)	ENSHCOG00000000175
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Oryzias	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00940000167247	ENSGT00730000110872.a.tb	ENSGT00940000159526
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b.e	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00940000159526	ENSGT00950000183171.A.b.a.a	ENSGT00940000158321
Indian medaka	MODERN SPECIES	30	SV2C (ENSOMEG00000000862)	F2RL2 (ENSOMEG00000017449)	f2r2.1 (ENSOMEG00000017436)	f2rl1.1 (ENSOMEG00000017425)	f2rl1.2 (ENSOMEG00000017412)	ch25hl2 (ENSOMEG00000017408)	s100z (ENSOMEG00000017389)	crhbp (ENSOMEG00000017356)	PDE8B (ENSOMEG00000017299) #9	wdr41 (ENSOMEG00000017120) #10	otpa (ENSOMEG00000017048) #11	ENSOMEG00000017042	AP3B1 (ENSOMEG00000017029) #17	scamp1 (ENSOMEG00000016923) #18	lhfpl2a (ENSOMEG00000016802) #19	bhmt (ENSOMEG00000016763) #22	ARSB (ENSOMEG00000016709)	ENSOMEG00000016612 #21	JMY (ENSOMEG00000016581) #27	HOMER1 (ENSOMEG00000016545) #29	DTWD2 (ENSOMEG00000016510)	tia1 (ENSOMEG00000016484)	C2orf42 (ENSOMEG00000016397)	ENSOMEG00000016365	ZNF703 (ENSOMEG00000016358)	ENSOMEG00000016346	TRAF2 (ENSOMEG00000001006)	ENSOMEG00000016222	pik3r1 (ENSOMEG00000015946)	ENSOMEG00000015877	ENSOMEG00000015838
Javanese ricefish	MODERN SPECIES	3	f2rl1.1 (ENSOJAG00000006526)	f2rl1.2 (ENSOJAG00000006457)	ch25hl2 (ENSOJAG00000006368)	s100z (ENSOJAG00000006352)	crhbp (ENSOJAG00000006339)	PDE8B (ENSOJAG00000006231) #9	wdr41 (ENSOJAG00000005989) #10	otpa (ENSOJAG00000005941) #11	tbca (ENSOJAG00000021072) #14	AP3B1 (ENSOJAG00000021042) #17	scamp1 (ENSOJAG00000021017) #18	ENSOJAG00000021004	lhfpl2a (ENSOJAG00000020996) #19	ARSB (ENSOJAG00000020969)	DMGDH (ENSOJAG00000020352) #21	bhmt (ENSOJAG00000020234) #22	JMY (ENSOJAG00000020221) #27	HOMER1 (ENSOJAG00000020158) #29	DTWD2 (ENSOJAG00000020140)	tia1 (ENSOJAG00000020121)	ENSOJAG00000020099	C2orf42 (ENSOJAG00000020094)	ZNF703 (ENSOJAG00000020091)	ENSOJAG00000020083	TRAF2 (ENSOJAG00000020060)	ENSOJAG00000020012	pik3r1 (ENSOJAG00000019765)	MAST4 (ENSOJAG00000019361)	srek1 (ENSOJAG00000019348)	erbin (ENSOJAG00000018954)	nln (ENSOJAG00000018811)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00940000167247	ENSGT00730000110872.a.tb	ENSGT00940000159526
Japanese Medaka HdrR	MODERN SPECIES	3	f2rl1.1 (ENSORLG00000022298)	f2rl1.2 (ENSORLG00000002198)	ch25hl2 (ENSORLG00000002205)	s100z (ENSORLG00000030634)	crhbp (ENSORLG00000002228)	PDE8B (ENSORLG00000002273) #9	wdr41 (ENSORLG00000002299) #10	otpa (ENSORLG00000022528) #11	tbca (ENSORLG00000022186) #14	AP3B1 (ENSORLG00000002365) #17	scamp1 (ENSORLG00000002381) #18	lhfpl2a (ENSORLG00000002386) #19	ARSB (ENSORLG00000002398)	ENSORLG00000025896	DMGDH (ENSORLG00000002405) #21	bhmt (ENSORLG00000002431) #22	JMY (ENSORLG00000002448) #27	HOMER1 (ENSORLG00000002474) #29	DTWD2 (ENSORLG00000002490)	ENSORLG00000002529	C2orf42 (ENSORLG00000002545)	ENSORLG00000024111	ZNF703 (ENSORLG00000026585)	TRAF2 (ENSORLG00000002584)	ENSORLG00000002627	pik3r1 (ENSORLG00000002670)	MAST4 (ENSORLG00000027458)	ENSORLG00000002700	ENSORLG00000028185	ENSORLG00000002711	erbin (ENSORLG00000002731)
Chinese medaka	MODERN SPECIES	753	s100z (ENSOSIG00000018041)	ch25hl2 (ENSOSIG00000018039)	f2rl1.2 (ENSOSIG00000018038)	f2rl1.1 (ENSOSIG00000018034)	f2r2.1 (ENSOSIG00000018033)	F2RL2 (ENSOSIG00000018032)	SV2C (ENSOSIG00000017982)	crhbp (ENSOSIG00000017963)	otpa (ENSOSIG00000017960) #11	tbca (ENSOSIG00000017957) #14	AP3B1 (ENSOSIG00000017913) #17	scamp1 (ENSOSIG00000017901) #18	lhfpl2a (ENSOSIG00000017898) #19	ARSB (ENSOSIG00000017895)	DMGDH (ENSOSIG00000017872) #21	bhmt (ENSOSIG00000017866) #22	JMY (ENSOSIG00000017853) #27	HOMER1 (ENSOSIG00000017839) #29	DTWD2 (ENSOSIG00000017832)	tia1 (ENSOSIG00000017744)	C2orf42 (ENSOSIG00000017741)	ZNF703 (ENSOSIG00000017738)	ENSOSIG00000017734	TRAF2 (ENSOSIG00000017726)	ENSOSIG00000017439	MAST4 (ENSOSIG00000017057)	srek1 (ENSOSIG00000017032)	erbin (ENSOSIG00000016717)	nln (ENSOSIG00000016668)	sgtb (ENSOSIG00000016666)	trappc13 (ENSOSIG00000016661)
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.tb	ENSGT00940000159526	ENSGT00950000183171.A.b.a.a	ENSGT00940000158321
Turquoise killifish	MODERN SPECIES	1611	Nfu_g_1_006533 (ENSNFUG00015010823)	f2rl1.1 (ENSNFUG00015010828)	F2RL1.2 (ENSNFUG00015010834)	ch25hl2 (ENSNFUG00015010842)	S100Z (ENSNFUG00015010858)	CRHBP (ENSNFUG00015003890)	PDE8B (ENSNFUG00015003954) #9	WDR41 (ENSNFUG00015004234) #10	OTPB (ENSNFUG00015004263) #11	tbca (ENSNFUG00015004274) #14	AP3B1 (ENSNFUG00015004371) #17	Nfu_g_1_006313 (ENSNFUG00015004582) #18	LHFPL2A (ENSNFUG00015004591) #19	ARSB (ENSNFUG00015004599)	DMGDH (ENSNFUG00015004648) #21	bhmt (ENSNFUG00015005047) #22	JMY (ENSNFUG00015005078) #27	HOMER1 (ENSNFUG00015005124) #29	DTWD2 (ENSNFUG00015005273)	TIA1 (ENSNFUG00015005301)	C2orf42 (ENSNFUG00015005377)	ENSNFUG00015005385	ENSNFUG00015005388	ZNF703 (ENSNFUG00015005392)	GRAMD3 (ENSNFUG00015005399)	TRAF2 (ENSNFUG00015005417)	ENSNFUG00015005446	TNC (ENSNFUG00015005511)	ENSNFUG00015005983	PIK3R1 (ENSNFUG00015006005)	MAST4 (ENSNFUG00015006138)
Mangrove rivulus	MODERN SPECIES	780														ARSB (ENSKMAG00000019028)	DMGDH (ENSKMAG00000018978) #21	bhmt (ENSKMAG00000018957) #22
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
NAME_4	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Mummichog	MODERN SPECIES	588										AP3B1 (ENSFHEG00000012100) #17	ENSFHEG00000012158 #17	scamp1 (ENSFHEG00000012174) #18	lhfpl2a (ENSFHEG00000012227) #19	ARSB (ENSFHEG00000012237)	DMGDH (ENSFHEG00000012286) #21	bhmt (ENSFHEG00000012328) #22	JMY (ENSFHEG00000012339) #27	HOMER1 (ENSFHEG00000012413) #29	ENSFHEG00000012436	ENSFHEG00000000277	ENSFHEG00000012462
Sheepshead minnow	MODERN SPECIES	557						crhbp (ENSCVAG00000013075)	PDE8B (ENSCVAG00000013188) #9	wdr41 (ENSCVAG00000013223) #10	otpa (ENSCVAG00000013245) #11	tbca (ENSCVAG00000013249) #14	AP3B1 (ENSCVAG00000013268) #17	scamp1 (ENSCVAG00000013299) #18	lhfpl2a (ENSCVAG00000013322) #19	ARSB (ENSCVAG00000013354)	DMGDH (ENSCVAG00000013445) #21	bhmt (ENSCVAG00000013479) #22	JMY (ENSCVAG00000013485) #27	HOMER1 (ENSCVAG00000013537) #29	DTWD2 (ENSCVAG00000013571)	ENSCVAG00000013609
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Poecilia	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000155535.qb.b	ENSGT00940000167247	ENSGT00730000110872.a.sb
NAME_6	ANCESTRAL SPECIES	13	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000165286
Amazon molly	MODERN SPECIES	280	f2rl1.1 (ENSPFOG00000020251)	f2rl1.2 (ENSPFOG00000020250)	ch25hl2 (ENSPFOG00000020249)	s100z (ENSPFOG00000009037)	crhbp (ENSPFOG00000008990)	PDE8B (ENSPFOG00000008456) #9	PDE8B (ENSPFOG00000022318) #9	wdr41 (ENSPFOG00000008295) #10	ENSPFOG00000008261	tbca (ENSPFOG00000008215) #14	AP3B1 (ENSPFOG00000008022) #17	scamp1 (ENSPFOG00000007907) #18	lhfpl2a (ENSPFOG00000007888) #19	ARSB (ENSPFOG00000007724)	DMGDH (ENSPFOG00000007360) #21	bhmt (ENSPFOG00000007257) #22	JMY (ENSPFOG00000007145) #27	HOMER1 (ENSPFOG00000006986) #29	ENSPFOG00000020248	DTWD2 (ENSPFOG00000006937)	tia1 (ENSPFOG00000022243)	C2orf42 (ENSPFOG00000006686)
Sailfin molly	MODERN SPECIES	2165														ENSPLAG00000012800	DMGDH (ENSPLAG00000012870) #21	bhmt (ENSPLAG00000012902) #22	JMY (ENSPLAG00000012907) #27	HOMER1 (ENSPLAG00000012950) #29
Guppy	MODERN SPECIES	442	f2rl1.1 (ENSPREG00000018692)	f2rl1.2 (ENSPREG00000018699)	ENSPREG00000018708	ch25hl2 (ENSPREG00000018722)	s100z (ENSPREG00000018742)	crhbp (ENSPREG00000018766)	PDE8B (ENSPREG00000018782) #9	wdr41 (ENSPREG00000018815) #10	otpa (ENSPREG00000018848) #11	ENSPREG00000018858	AP3B1 (ENSPREG00000018892) #17	scamp1 (ENSPREG00000018981) #18	lhfpl2a (ENSPREG00000019023) #19	ARSB (ENSPREG00000019046)	DMGDH (ENSPREG00000019090) #21	bhmt (ENSPREG00000019126) #22	JMY (ENSPREG00000019156) #27	HOMER1 (ENSPREG00000019187) #29	DTWD2 (ENSPREG00000019213)	tia1 (ENSPREG00000019232)	C2orf42 (ENSPREG00000019264)	ZNF703 (ENSPREG00000019285)	ENSPREG00000019310	TRAF2 (ENSPREG00000019329)	ENSPREG00000019390	ENSPREG00000019648	ENSPREG00000019665	pik3r1 (ENSPREG00000019686)	MAST4 (ENSPREG00000019760)	ENSPREG00000019802	ENSPREG00000019853
Platyfish	MODERN SPECIES	22	f2r2.1 (ENSXMAG00000018922)	f2rl1.1 (ENSXMAG00000018920)	f2rl1.2 (ENSXMAG00000022315)	ch25hl2 (ENSXMAG00000019422)	s100z (ENSXMAG00000018916)	crhbp (ENSXMAG00000018907)	PDE8B (ENSXMAG00000018842) #9	wdr41 (ENSXMAG00000018834) #10	otpa (ENSXMAG00000029861) #11	tbca (ENSXMAG00000024381) #14	AP3B1 (ENSXMAG00000018805) #17	scamp1 (ENSXMAG00000028164) #18	lhfpl2a (ENSXMAG00000018753) #19	ARSB (ENSXMAG00000018745)	DMGDH (ENSXMAG00000018724) #21	bhmt (ENSXMAG00000024462) #22	JMY (ENSXMAG00000018710) #27	HOMER1 (ENSXMAG00000018702) #29	DTWD2 (ENSXMAG00000018696)	tia1 (ENSXMAG00000018689)	C2orf42 (ENSXMAG00000018679)	ZNF703 (ENSXMAG00000018678)	ENSXMAG00000029258	TRAF2 (ENSXMAG00000025264)	ENSXMAG00000018617	pik3r1 (ENSXMAG00000018595)	MAST4 (ENSXMAG00000024407)	ENSXMAG00000018574	ENSXMAG00000017091	ENSXMAG00000027782	ENSXMAG00000028210
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Cichlidae	ANCESTRAL SPECIES	10	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Haplochromini	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
P. nyererei	MODERN SPECIES	297	F2R (ENSPNYG00000005859)	f2rl1.1 (ENSPNYG00000005869)	f2rl1.2 (ENSPNYG00000005884)	ch25hl2 (ENSPNYG00000005891)	s100z (ENSPNYG00000005915)	crhbp (ENSPNYG00000005959)	PDE8B (ENSPNYG00000005997) #9	wdr41 (ENSPNYG00000006061) #10	otpa (ENSPNYG00000006080) #11	tbca (ENSPNYG00000006104) #14	AP3B1 (ENSPNYG00000006176) #17	scamp1 (ENSPNYG00000006292) #18	lhfpl2a (ENSPNYG00000006322) #19	ARSB (ENSPNYG00000006334)	DMGDH (ENSPNYG00000006358) #21	bhmt (ENSPNYG00000006436) #22	JMY (ENSPNYG00000006512) #27	HOMER1 (ENSPNYG00000006531) #29	DTWD2 (ENSPNYG00000006563)	tia1 (ENSPNYG00000006589)	C2orf42 (ENSPNYG00000006630)	ZNF703 (ENSPNYG00000006638)	ENSPNYG00000006652	TRAF2 (ENSPNYG00000006678)	ENSPNYG00000006746	ENSPNYG00000007000	pik3r1 (ENSPNYG00000007028)	MAST4 (ENSPNYG00000007081)	ENSPNYG00000007101	ENSPNYG00000007150	srek1 (ENSPNYG00000007160)
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Eastern happy	MODERN SPECIES	19	f2rl1.2 (ENSACLG00000025984)	ch25hl2 (ENSACLG00000025988)	s100z (ENSACLG00000025995)	crhbp (ENSACLG00000026018)	PDE8B (ENSACLG00000026032) #9	wdr41 (ENSACLG00000026095) #10	otpa (ENSACLG00000026112) #11	tbca (ENSACLG00000026126) #14	AP3B1 (ENSACLG00000026156) #17	scamp1 (ENSACLG00000026234) #18	lhfpl2a (ENSACLG00000026258) #19	ARSB (ENSACLG00000026268)	ENSACLG00000026286	ENSACLG00000026291	DMGDH (ENSACLG00000026324) #21	bhmt (ENSACLG00000026404) #22	JMY (ENSACLG00000026423) #27	HOMER1 (ENSACLG00000026430) #29	DTWD2 (ENSACLG00000026455)	tia1 (ENSACLG00000026467)	C2orf42 (ENSACLG00000026481)	ZNF703 (ENSACLG00000026525)	ENSACLG00000026531	ENSACLG00000026552	TRAF2 (ENSACLG00000026561)	ENSACLG00000026621	ENSACLG00000026666	pik3r1 (ENSACLG00000026675)	MAST4 (ENSACLG00000026723)	ENSACLG00000026727	srek1 (ENSACLG00000026754)
Zebra mbuna	MODERN SPECIES	1110	f2rl1.1 (ENSMZEG00005006863)	f2rl1.2 (ENSMZEG00005006848)	ch25hl2 (ENSMZEG00005006834)	s100z (ENSMZEG00005006797)	crhbp (ENSMZEG00005006393)	PDE8B (ENSMZEG00005006348) #9	wdr41 (ENSMZEG00005006325) #10	otpa (ENSMZEG00005006314) #11	tbca (ENSMZEG00005006300) #14	AP3B1 (ENSMZEG00005006264) #17	scamp1 (ENSMZEG00005006251) #18	lhfpl2a (ENSMZEG00005006236) #19	ARSB (ENSMZEG00005006208)	ENSMZEG00005006197	DMGDH (ENSMZEG00005006121) #21	bhmt (ENSMZEG00005006090) #22	JMY (ENSMZEG00005006081) #27	HOMER1 (ENSMZEG00005006061) #29	DTWD2 (ENSMZEG00005006042)	tia1 (ENSMZEG00005006018)	C2orf42 (ENSMZEG00005005998)	ZNF703 (ENSMZEG00005005987)	ENSMZEG00005005971	TRAF2 (ENSMZEG00005005940)	ENSMZEG00005005860	pik3r1 (ENSMZEG00005005825)	MAST4 (ENSMZEG00005005800)	ENSMZEG00005005771	ENSMZEG00005005758	ENSMZEG00005005735	srek1 (ENSMZEG00005005719)
Burton s mouthbrooder	MODERN SPECIES	380	F2R (ENSHBUG00000006089)	f2rl1.1 (ENSHBUG00000006111)	f2rl1.2 (ENSHBUG00000006100)	ch25hl2 (ENSHBUG00000006126)	s100z (ENSHBUG00000006132)	crhbp (ENSHBUG00000000153)	PDE8B (ENSHBUG00000006197) #9	wdr41 (ENSHBUG00000006222) #10	otpa (ENSHBUG00000006237) #11	tbca (ENSHBUG00000006256) #14	AP3B1 (ENSHBUG00000006320) #17	scamp1 (ENSHBUG00000006341) #18	lhfpl2a (ENSHBUG00000006355) #19	ARSB (ENSHBUG00000006398)	DMGDH (ENSHBUG00000006495) #21	bhmt (ENSHBUG00000006515) #22	JMY (ENSHBUG00000006526) #27	HOMER1 (ENSHBUG00000006589) #29	DTWD2 (ENSHBUG00000006635)	tia1 (ENSHBUG00000006676)	C2orf42 (ENSHBUG00000006694)	ZNF703 (ENSHBUG00000006709)	ENSHBUG00000006724	TRAF2 (ENSHBUG00000006780)	ENSHBUG00000006797	ENSHBUG00000006812	pik3r1 (ENSHBUG00000006887)	ENSHBUG00000006912	ENSHBUG00000006963	ENSHBUG00000006976	ENSHBUG00000007026
Lyretail cichlid	MODERN SPECIES	336										AP3B1 (ENSNBRG00000011739) #17	ENSNBRG00000011704 #17	scamp1 (ENSNBRG00000011651) #18	lhfpl2a (ENSNBRG00000011632) #19	ARSB (ENSNBRG00000011569)	DMGDH (ENSNBRG00000011481) #21	bhmt (ENSNBRG00000011436) #22	ENSNBRG00000011425 #27	HOMER1 (ENSNBRG00000011402) #29	DTWD2 (ENSNBRG00000011366)	tia1 (ENSNBRG00000011319)	C2orf42 (ENSNBRG00000011291)	ZNF703 (ENSNBRG00000011274)	ENSNBRG00000011235	TRAF2 (ENSNBRG00000011194)	ENSNBRG00000011178	ENSNBRG00000010884	pik3r1 (ENSNBRG00000010818)	MAST4 (ENSNBRG00000010796)	ENSNBRG00000010744	ENSNBRG00000010729	srek1 (ENSNBRG00000010718)
Nile tilapia	MODERN SPECIES	19	f2rl1.1 (ENSONIG00000015446)	f2rl1.2 (ENSONIG00000015447)	ch25hl2 (ENSONIG00000021002)	s100z (ENSONIG00000035896)	crhbp (ENSONIG00000015451)	PDE8B (ENSONIG00000015454) #9	wdr41 (ENSONIG00000015465) #10	otpa (ENSONIG00000015466) #11	tbca (ENSONIG00000038998) #14	AP3B1 (ENSONIG00000015468) #17	scamp1 (ENSONIG00000015481) #18	lhfpl2 (ENSONIG00000040189) #19	ARSB (ENSONIG00000015486)	slc1a1 (ENSONIG00000007386)	DMGDH (ENSONIG00000007381) #21	bhmt (ENSONIG00000007379) #22	JMY (ENSONIG00000040021) #27	HOMER1 (ENSONIG00000007371) #29	DTWD2 (ENSONIG00000007368)	tia1 (ENSONIG00000007364)	C2orf42 (ENSONIG00000040415)	ZNF703 (ENSONIG00000011046)	ENSONIG00000011047	TRAF2 (ENSONIG00000011048)	ENSONIG00000011052	pik3r1 (ENSONIG00000011065)	ENSONIG00000011071	ENSONIG00000033012	srek1 (ENSONIG00000011080)	erbin (ENSONIG00000011084)	nln (ENSONIG00000011087)
Midas cichlid	MODERN SPECIES	991	f2rl1.1 (ENSACIG00000016939)	f2rl1.2 (ENSACIG00000016930)	ch25hl2 (ENSACIG00000016920)	s100z (ENSACIG00000016874)	crhbp (ENSACIG00000016747)	PDE8B (ENSACIG00000016694) #9	wdr41 (ENSACIG00000016654) #10	otpa (ENSACIG00000016644) #11	ENSACIG00000016630	AP3B1 (ENSACIG00000016606) #17	ENSACIG00000016574 #17	scamp1 (ENSACIG00000016545) #18	lhfpl2a (ENSACIG00000016531) #19	ARSB (ENSACIG00000016480)	DMGDH (ENSACIG00000016447) #21	bhmt (ENSACIG00000016426) #22	ENSACIG00000016416 #27	HOMER1 (ENSACIG00000016398) #29	DTWD2 (ENSACIG00000016379)	tia1 (ENSACIG00000016352)	C2orf42 (ENSACIG00000016327)	ZNF703 (ENSACIG00000016321)	ENSACIG00000016283	TRAF2 (ENSACIG00000016261)
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000238147	ENSGT00940000179190	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb.f	ENSGT00730000110872.a.tb
Amphiprion	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000238147	ENSGT00940000179190	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247
Orange clownfish	MODERN SPECIES	7	otpa (ENSAPEG00000003913) #11	tbca (ENSAPEG00000003898) #14	ENSAPEG00000003873	AP3B1 (ENSAPEG00000003852) #17	scamp1 (ENSAPEG00000003780) #18	lhfpl2a (ENSAPEG00000003763) #19	scamp1 (ENSAPEG00000003704) #18	ENSAPEG00000003682	scamp1 (ENSAPEG00000003628) #18	ENSAPEG00000003605	lhfpl2a (ENSAPEG00000003590) #19	ENSAPEG00000003561	ENSAPEG00000003544	ARSB (ENSAPEG00000003538)	DMGDH (ENSAPEG00000003462) #21	bhmt (ENSAPEG00000003429) #22	JMY (ENSAPEG00000003353) #27	HOMER1 (ENSAPEG00000003297) #29	DTWD2 (ENSAPEG00000003255)	tia1 (ENSAPEG00000003200)	C2orf42 (ENSAPEG00000003176)	ZNF703 (ENSAPEG00000003147)	ENSAPEG00000003131	TRAF2 (ENSAPEG00000003072)	ENSAPEG00000003059	ENSAPEG00000003033	ENSAPEG00000003005	ENSAPEG00000002546	pik3r1 (ENSAPEG00000002394)	ENSAPEG00000002364	MAST4 (ENSAPEG00000002343)
Clown anemonefish	MODERN SPECIES	1057													lhfpl2a (ENSAOCG00000018508) #19	ARSB (ENSAOCG00000018525)	DMGDH (ENSAOCG00000018587) #21	bhmt (ENSAOCG00000018618) #22	JMY (ENSAOCG00000018630) #27	HOMER1 (ENSAOCG00000018662) #29	DTWD2 (ENSAOCG00000018695)	tia1 (ENSAOCG00000018765)	C2orf42 (ENSAOCG00000018828)
Spiny chromis	MODERN SPECIES	427													ENSAPOG00000006608	ENSAPOG00000006621	DMGDH (ENSAPOG00000006693) #21	bhmt (ENSAPOG00000006733) #22	JMY (ENSAPOG00000006794) #27	HOMER1 (ENSAPOG00000006833) #29	DTWD2 (ENSAPOG00000006867)	tia1 (ENSAPOG00000007089)	GRIK4 (ENSAPOG00000007132)	ccdc153 (ENSAPOG00000007176)	cbl (ENSAPOG00000007193)	mcamb (ENSAPOG00000007289)	RNF26 (ENSAPOG00000007325)	c1qtnf5 (ENSAPOG00000007347)	KMT2A (ENSAPOG00000007511)	UBE4A (ENSAPOG00000007604)	ENSAPOG00000007619
Bicolor damselfish	MODERN SPECIES	801													lhfpl2a (ENSSPAG00000008513) #19	ARSB (ENSSPAG00000008495)	DMGDH (ENSSPAG00000008435) #21	bhmt (ENSSPAG00000008413) #22	JMY (ENSSPAG00000008361) #27	HOMER1 (ENSSPAG00000008331) #29	DTWD2 (ENSSPAG00000008282)	tia1 (ENSSPAG00000008228)	C2orf42 (ENSSPAG00000008201)	ZNF703 (ENSSPAG00000008194)
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247
Eupercaria	ANCESTRAL SPECIES	13	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT01030000235246	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT01050000244840.A.a.a.g	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000167247	ENSGT00730000110872.a.tb	ENSGT00940000159526	ENSGT00950000183171.A.b.a.a	ENSGT00940000158321	ENSGT00390000015280
Fugu	MODERN SPECIES	18	f2rl1.1 (ENSTRUG00000018352)	f2rl1.2 (ENSTRUG00000025409)	ch25hl2 (ENSTRUG00000018350)	s100z (ENSTRUG00000029087)	crhbp (ENSTRUG00000018344)	PDE8B (ENSTRUG00000018324) #9	wdr41 (ENSTRUG00000018319) #10	otpa (ENSTRUG00000018317) #11	tbca (ENSTRUG00000018312) #14	AP3B1 (ENSTRUG00000018286) #17	scamp1 (ENSTRUG00000018272) #18	lhfpl2a (ENSTRUG00000022518) #19	ENSTRUG00000026160	ARSB (ENSTRUG00000003412)	DMGDH (ENSTRUG00000003979) #21	bhmt (ENSTRUG00000004203) #22	JMY (ENSTRUG00000027651) #27	HOMER1 (ENSTRUG00000004898) #29	DTWD2 (ENSTRUG00000005327)	tia1 (ENSTRUG00000005456)	C2orf42 (ENSTRUG00000025901)	ENSTRUG00000006122	TRAF2 (ENSTRUG00000006395)	ENSTRUG00000020317	pik3r1 (ENSTRUG00000007584)	MAST4 (ENSTRUG00000033425)	ENSTRUG00000027329	ENSTRUG00000022058	erbin (ENSTRUG00000003320)	nln (ENSTRUG00000004044)	sgtb (ENSTRUG00000004914)
Tetraodon	MODERN SPECIES	26	spra (ENSTNIG00000019712)	pnp4a (ENSTNIG00000019818)	ENSTNIG00000000781	srd5a2a (ENSTNIG00000019827)	ENSTNIG00000019815	RAP1GAP (ENSTNIG00000019473)	ENSTNIG00000019482	ENSTNIG00000019813	ENSTNIG00000019639	ENSTNIG00000019770	ENSTNIG00000019505	ENSTNIG00000019701	TPM4 (ENSTNIG00000019471)	ENSTNIG00000019822	ENSTNIG00000019554	bhmt (ENSTNIG00000019455) #22	ENSTNIG00000000225	rgs16 (ENSTNIG00000019476)	ENSTNIG00000019688	ENSTNIG00000000680	serinc1 (ENSTNIG00000019609) ##36	ENSTNIG00000019734	ENSTNIG00000019481	ENSTNIG00000019474	ENSTNIG00000000995	ENSTNIG00000019490	ENSTNIG00000019592	ENSTNIG00000000861	ENSTNIG00000019700	ENSTNIG00000019816	ENSTNIG00000019665
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb
Ballan wrasse	MODERN SPECIES	724												ENSLBEG00000001486	nudcd3 (ENSLBEG00000001518)	mrps24 (ENSLBEG00000001529)	DMGDH (ENSLBEG00000001561) #21	bhmt (ENSLBEG00000001650) #22	ENSLBEG00000001684 #27	HOMER1 (ENSLBEG00000001692) #29	ENSLBEG00000001728	ENSLBEG00000001749	ENSLBEG00000001788	cldn5a (ENSLBEG00000001811)
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb
Perciformes	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb
Cottioidei	ANCESTRAL SPECIES	33	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00940000169994	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399
Lumpfish	MODERN SPECIES	3	f2r2.1 (ENSCLMG00005019506)	f2rl1.1 (ENSCLMG00005019507)	f2rl1.2 (ENSCLMG00005019508)	ch25hl2 (ENSCLMG00005019509)	s100z (ENSCLMG00005019510)	crhbp (ENSCLMG00005004294)	PDE8B (ENSCLMG00005004331) #9	wdr41 (ENSCLMG00005004503) #10	otpa (ENSCLMG00005004607) #11	tbca (ENSCLMG00005004813) #14	AP3B1 (ENSCLMG00005004891) #17	scamp1 (ENSCLMG00005010083) #18	lhfpl2a (ENSCLMG00005010085) #19	ARSB (ENSCLMG00005010086)	DMGDH (ENSCLMG00005010089) #21	bhmt (ENSCLMG00005010092) #22	JMY (ENSCLMG00005010111) #27	HOMER1 (ENSCLMG00005010119) #29	ENSCLMG00005010565	tia1 (ENSCLMG00005010569)	C2orf42 (ENSCLMG00005010818)	ZNF703 (ENSCLMG00005010820)	ENSCLMG00005010821	TRAF2 (ENSCLMG00005010822)	ENSCLMG00005010858	pik3r1 (ENSCLMG00005014157)	ENSCLMG00005014479	ENSCLMG00005016068	KCNT1 (ENSCLMG00005016070)	ENSCLMG00005016085	cdk5rap2 (ENSCLMG00005016087)
Stickleback	MODERN SPECIES	13	CERT1 (ENSGACG00000015744)	SV2C (ENSGACG00000015751)	F2RL2 (ENSGACG00000015753)	ENSGACG00000015755	f2rl1.2 (ENSGACG00000015756)	ch25hl2 (ENSGACG00000015757)	s100z (ENSGACG00000015758)	crhbp (ENSGACG00000015759)	PDE8B (ENSGACG00000015761) #9	wdr41 (ENSGACG00000015762) #10	otpa (ENSGACG00000015770) #11	tbca (ENSGACG00000015771) #14	AP3B1 (ENSGACG00000015772) #17	ARSB (ENSGACG00000015775)	DMGDH (ENSGACG00000015777) #21	bhmt (ENSGACG00000015778) #22	JMY (ENSGACG00000015780) #27	HOMER1 (ENSGACG00000015784) #29	ENSGACG00000015792	DTWD2 (ENSGACG00000015793)	tia1 (ENSGACG00000015800)	C2orf42 (ENSGACG00000015801)	ZNF703 (ENSGACG00000015803)	ENSGACG00000015804	ENSGACG00000015806	TRAF2 (ENSGACG00000015808)	ENSGACG00000015813	pik3r1 (ENSGACG00000015820)	MAST4 (ENSGACG00000015824)	ENSGACG00000015826	ENSGACG00000015827
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000179190	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00940000159526
Pike perch	MODERN SPECIES	33	f2rl1.1 (ENSSLUG00000012156)	f2rl1.1 (ENSSLUG00000012154)	f2rl1.2 (ENSSLUG00000012151)	ch25hl2 (ENSSLUG00000012148)	s100z (ENSSLUG00000012144)	crhbp (ENSSLUG00000012137)	PDE8B (ENSSLUG00000012130) #9	wdr41 (ENSSLUG00000011958) #10	otpa (ENSSLUG00000011935) #11	tbca (ENSSLUG00000011926) #14	AP3B1 (ENSSLUG00000011801) #17	scamp1 (ENSSLUG00000011766) #18	lhfpl2a (ENSSLUG00000011761) #19	ARSB (ENSSLUG00000011744)	DMGDH (ENSSLUG00000011623) #21	bhmt (ENSSLUG00000011582) #22	JMY (ENSSLUG00000011567) #27	HOMER1 (ENSSLUG00000011333) #29	DTWD2 (ENSSLUG00000011320)	tia1 (ENSSLUG00000011052)	C2orf42 (ENSSLUG00000011023)	ZNF703 (ENSSLUG00000011019)	ENSSLUG00000011008	TRAF2 (ENSSLUG00000010998)	ENSSLUG00000008757	pik3r1 (ENSSLUG00000008463)	MAST4 (ENSSLUG00000008099)	srek1 (ENSSLUG00000008058)	erbin (ENSSLUG00000007087)	nln (ENSSLUG00000002710)	sgtb (ENSSLUG00000002567)
Channel bull blenny	MODERN SPECIES	3	ENSCGOG00000017878	f2r2.1 (ENSCGOG00000017879)	f2rl1.1 (ENSCGOG00000017880)	f2rl1.2 (ENSCGOG00000017882)	s100z (ENSCGOG00000017887)	crhbp (ENSCGOG00000017890)	PDE8B (ENSCGOG00000017917) #9	wdr41 (ENSCGOG00000018568) #10	otpa (ENSCGOG00000018661) #11	tbca (ENSCGOG00000018671) #14	AP3B1 (ENSCGOG00000018679) #17	scamp1 (ENSCGOG00000018847) #18	lhfpl2a (ENSCGOG00000018856) #19	ARSB (ENSCGOG00000018860)	DMGDH (ENSCGOG00000018919) #21	bhmt (ENSCGOG00000019370) #22	JMY (ENSCGOG00000019494) #27	ENSCGOG00000019503	HOMER1 (ENSCGOG00000019507) #29	DTWD2 (ENSCGOG00000019527)	tia1 (ENSCGOG00000019535)	C2orf42 (ENSCGOG00000019773)	ZNF703 (ENSCGOG00000019774)	ENSCGOG00000019775	TRAF2 (ENSCGOG00000019782)	ENSCGOG00000019994	ENSCGOG00000020519	pik3r1 (ENSCGOG00000020529)	MAST4 (ENSCGOG00000020716)	ENSCGOG00000020735	srek1 (ENSCGOG00000020743)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125.n	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00940000159526	ENSGT00950000183171.A.b.a.a
Gilthead seabream	MODERN SPECIES	3	PDE8B (ENSSAUG00010005798) #9	ch25hl2 (ENSSAUG00010008783)	s100z (ENSSAUG00010008785)	crhbp (ENSSAUG00010008786)	ENSSAUG00010008788	ENSSAUG00010008789	wdr41 (ENSSAUG00010008792) #10	otpa (ENSSAUG00010009047) #11	tbca (ENSSAUG00010009050) #14	ENSSAUG00010009054	AP3B1 (ENSSAUG00010009064) #17	scamp1 (ENSSAUG00010009142) #18	lhfpl2a (ENSSAUG00010009145) #19	ARSB (ENSSAUG00010009148)	DMGDH (ENSSAUG00010009189) #21	bhmt (ENSSAUG00010011150) #22	ENSSAUG00010011175	ENSSAUG00010011179	ENSSAUG00010011182	ENSSAUG00010011184	ENSSAUG00010011186	JMY (ENSSAUG00010011187) #27	HOMER1 (ENSSAUG00010011189) #29	FGFR1 (ENSSAUG00010011246)	ENSSAUG00010012278	ENSSAUG00010012283	marchf5l (ENSSAUG00010012310)	actr1b (ENSSAUG00010012327)	npy8ar (ENSSAUG00010012683)	ENSSAUG00010012685	ENSSAUG00010012687
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125.n	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00940000159526	ENSGT00950000183171.A.b.a.a
European seabass	MODERN SPECIES	9	SV2C (ENSDLAG00005022048)	F2RL2 (ENSDLAG00005022059)	f2r2.1 (ENSDLAG00005022061)	f2rl1.2 (ENSDLAG00005022063)	ch25hl2 (ENSDLAG00005022068)	s100z (ENSDLAG00005022069)	crhbp (ENSDLAG00005022074)	PDE8B (ENSDLAG00005022099) #9	wdr41 (ENSDLAG00005022564) #10	otpa (ENSDLAG00005022587) #11	AP3B1 (ENSDLAG00005022652) #17	SCAMP1 (ENSDLAG00005034904) #18	LHFPL2 (ENSDLAG00005023771) #19	ARSB (ENSDLAG00005023776)	DMGDH (ENSDLAG00005000598) #21	bhmt (ENSDLAG00005000880) #22	JMY (ENSDLAG00005000911) #27	HOMER1 (ENSDLAG00005029240) #29	ENSDLAG00005030106	ENSDLAG00005000940	ENSDLAG00005030934	ENSDLAG00005032108	ENSDLAG00005000974	ENSDLAG00005000989	ENSDLAG00005001152	PIK3R1 (ENSDLAG00005005237)	MAST4 (ENSDLAG00005005489)	ENSDLAG00005006395	erbin (ENSDLAG00005006540)	nln (ENSDLAG00005010170)	sgtb (ENSDLAG00005011075)
Large yellow croaker	MODERN SPECIES	4	ENSLCRG00005015039	MAST4 (ENSLCRG00005015016)	pik3r1 (ENSLCRG00005014686)	ENSLCRG00005013641	TRAF2 (ENSLCRG00005013623)	ENSLCRG00005013614	ZNF703 (ENSLCRG00005013609)	ENSLCRG00005013608	C2orf42 (ENSLCRG00005013606)	tia1 (ENSLCRG00005013221)	DTWD2 (ENSLCRG00005013205)	ENSLCRG00005013202	HOMER1 (ENSLCRG00005013125) #29	JMY (ENSLCRG00005013114) #27	DMGDH (ENSLCRG00005011869) #21	bhmt (ENSLCRG00005011814) #22	ARSB (ENSLCRG00005011801)	lhfpl2a (ENSLCRG00005011798) #19	scamp1 (ENSLCRG00005011792) #18	AP3B1 (ENSLCRG00005010933) #17	tbca (ENSLCRG00005010923) #14	otpa (ENSLCRG00005010920) #11	wdr41 (ENSLCRG00005010827) #10	PDE8B (ENSLCRG00005010781) #9	crhbp (ENSLCRG00005010764)	ch25hl2 (ENSLCRG00005010760)	s100z (ENSLCRG00005010758)	f2rl1.2 (ENSLCRG00005010757)	f2rl1.1 (ENSLCRG00005010756)	f2r2.1 (ENSLCRG00005010755)	F2RL2 (ENSLCRG00005010753)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Carangaria	ANCESTRAL SPECIES	17	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT01030000235246	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603.n #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Seriola	ANCESTRAL SPECIES	53	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603.n #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00390000012762	ENSGT00940000158491.b	ENSGT00940000163584.a	ENSGT00940000157242.a.b	ENSGT00950000182815.a.a.b.g	ENSGT00940000165531.b.b	ENSGT00950000183197.b.a.b	ENSGT00390000015280	ENSGT00940000158321	ENSGT00950000183171.A.b.a.a	ENSGT00940000159526	ENSGT00730000110872.a.tb
Greater amberjack	MODERN SPECIES	261							wdr41 (ENSSDUG00000009515) #10	otpa (ENSSDUG00000009537) #11	tbca (ENSSDUG00000009548) #14	AP3B1 (ENSSDUG00000009565) #17	scamp1 (ENSSDUG00000009625) #18	lhfpl2a (ENSSDUG00000009655) #19	ENSSDUG00000009661	ARSB (ENSSDUG00000009672)	DMGDH (ENSSDUG00000009692) #21	bhmt (ENSSDUG00000009720) #22	JMY (ENSSDUG00000009752) #27	HOMER1 (ENSSDUG00000009802) #29	DTWD2 (ENSSDUG00000009851)	zgc:162472 (ENSSDUG00000009882)	ENSSDUG00000009911	arid6 (ENSSDUG00000009934)	aqp3b (ENSSDUG00000009949)	unc5da (ENSSDUG00000009979)	tnfrsfa (ENSSDUG00000010104)	CYB561A3 (ENSSDUG00000010122)	trappc13 (ENSSDUG00000010162)	sgtb (ENSSDUG00000010220)	sgtb (ENSSDUG00000010248)	nln (ENSSDUG00000010276)	erbin (ENSSDUG00000010319)
Yellowtail amberjack	MODERN SPECIES	3042	f2r2.1 (ENSSLDG00000014072)	f2rl1.1 (ENSSLDG00000014079)	f2rl1.2 (ENSSLDG00000014088)	ch25hl2 (ENSSLDG00000014097)	s100z (ENSSLDG00000014112)	crhbp (ENSSLDG00000014122)	PDE8B (ENSSLDG00000014147) #9	wdr41 (ENSSLDG00000014187) #10	otpa (ENSSLDG00000014245) #11	tbca (ENSSLDG00000014269) #14	AP3B1 (ENSSLDG00000014297) #17	scamp1 (ENSSLDG00000014368) #18	lhfpl2a (ENSSLDG00000014391) #19	ARSB (ENSSLDG00000014410)	DMGDH (ENSSLDG00000014440) #21	bhmt (ENSSLDG00000014491) #22	JMY (ENSSLDG00000014512) #27	HOMER1 (ENSSLDG00000014538) #29	TNPO1 (ENSSLDG00000014578)	fcho2 (ENSSLDG00000014677)	TMEM174 (ENSSLDG00000014821)	foxd1 (ENSSLDG00000014830)	btf3 (ENSSLDG00000014843)	ankra2 (ENSSLDG00000014857)	ARHGEF28 (ENSSLDG00000014890)	ENC1 (ENSSLDG00000014933)	hexb (ENSSLDG00000015025)	gfm2 (ENSSLDG00000014952)	nsa2 (ENSSLDG00000015100)	tor1 (ENSSLDG00000015126)	tor1 (ENSSLDG00000015142)
Barramundi perch	MODERN SPECIES	196											AP3B1 (ENSLCAG00010008572) #17	scamp1 (ENSLCAG00010008528) #18	lhfpl2a (ENSLCAG00010008526) #19	ARSB (ENSLCAG00010008521)	DMGDH (ENSLCAG00010008202) #21	bhmt (ENSLCAG00010008085) #22	ENSLCAG00010008067 #27	HOMER1 (ENSLCAG00010008055) #29	DTWD2 (ENSLCAG00010008045)	tia1 (ENSLCAG00010008025)	C2orf42 (ENSLCAG00010007920)	ZNF703 (ENSLCAG00010007904)	ENSLCAG00010007900	TRAF2 (ENSLCAG00010007890)	ENSLCAG00010007386	pik3r1 (ENSLCAG00010007246)	MAST4 (ENSLCAG00010007004)	ENSLCAG00010006959	srek1 (ENSLCAG00010006955)	ENSLCAG00010006952	erbin (ENSLCAG00010006490)
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00950000182888.a.a.a.e	ENSGT00390000018706	ENSGT00550000074890.f	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b.e	ENSGT00940000155831.cb	ENSGT00940000157156	ENSGT00940000157140.b.a.b.b	ENSGT01040000244713	ENSGT00940000157105	ENSGT00940000155389	ENSGT01050000244898.b.b	ENSGT00940000157321
Tongue sole	MODERN SPECIES	5	dab2 (ENSCSEG00000013563)	ENSCSEG00000013544	crhbp (ENSCSEG00000013525)	PDE8B (ENSCSEG00000013472) #9	wdr41 (ENSCSEG00000013442) #10	otpa (ENSCSEG00000013434) #11	tbca (ENSCSEG00000013428) #14	AP3B1 (ENSCSEG00000013388) #17	scamp1 (ENSCSEG00000013358) #18	lhfpl2a (ENSCSEG00000013349) #19	ARSB (ENSCSEG00000013331)	ARSB (ENSCSEG00000013315)	ARSB (ENSCSEG00000013306)	ARSB (ENSCSEG00000013290)	DMGDH (ENSCSEG00000013250) #21	bhmt (ENSCSEG00000013233) #22	JMY (ENSCSEG00000013221) #27	HOMER1 (ENSCSEG00000013201) #29	tor1 (ENSCSEG00000013176)	nsa2 (ENSCSEG00000013161)	gfm2 (ENSCSEG00000013115)	hexb (ENSCSEG00000013085)	ENC1 (ENSCSEG00000013077)	ARHGEF28 (ENSCSEG00000013022)	ankra2 (ENSCSEG00000012998)	btf3 (ENSCSEG00000013006)	foxd1 (ENSCSEG00000012995)	fcho2 (ENSCSEG00000012754)	TNPO1 (ENSCSEG00000012674)	mob1bb (ENSCSEG00000012669)	dck (ENSCSEG00000012658)
Turbot	MODERN SPECIES	16	f2rl1.1 (ENSSMAG00000010383)	f2rl1.2 (ENSSMAG00000027655)	ch25hl2 (ENSSMAG00000010398)	s100z (ENSSMAG00000024918)	crhbp (ENSSMAG00000010424)	PDE8B (ENSSMAG00000010435) #9	wdr41 (ENSSMAG00000010452) #10	otpa (ENSSMAG00000026303) #11	tbca (ENSSMAG00000010486) #14	AP3B1 (ENSSMAG00000010503) #17	SCAMP1 (ENSSMAG00000010527) #18	ENSSMAG00000026772	LHFPL2 (ENSSMAG00000010559) #19	ARSB (ENSSMAG00000010569)	DMGDH (ENSSMAG00000010584) #21	bhmt (ENSSMAG00000010622) #22	JMY (ENSSMAG00000010657) #27	HOMER1 (ENSSMAG00000010667) #29	ENSSMAG00000010704	NSA2 (ENSSMAG00000010754)	gfm2 (ENSSMAG00000010773)	hexb (ENSSMAG00000010849)	ENC1 (ENSSMAG00000011072)	ENSSMAG00000034516	ARHGEF28 (ENSSMAG00000011073)	ankra2 (ENSSMAG00000011128)	btf3 (ENSSMAG00000011148)	foxd1 (ENSSMAG00000028504)	ENSSMAG00000032227	fcho2 (ENSSMAG00000011163)	TNPO1 (ENSSMAG00000011202)
Anabantaria	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Zig-zag eel	MODERN SPECIES	3	f2r2.1 (ENSMAMG00000027882)	f2rl1.1 (ENSMAMG00000004308)	f2rl1.2 (ENSMAMG00000004294)	ch25hl2 (ENSMAMG00000004284)	s100z (ENSMAMG00000004265)	crhbp (ENSMAMG00000004254)	PDE8B (ENSMAMG00000004204) #9	wdr41 (ENSMAMG00000004169) #10	otpa (ENSMAMG00000004156) #11	tbca (ENSMAMG00000004128) #14	AP3B1 (ENSMAMG00000004074) #17	SCAMP1 (ENSMAMG00000004014) #18	LHFPL2 (ENSMAMG00000003982) #19	ARSB (ENSMAMG00000003940)	DMGDH (ENSMAMG00000003893) #21	bhmt (ENSMAMG00000003856) #22	JMY (ENSMAMG00000003843) #27	HOMER1 (ENSMAMG00000024864) #29	ENSMAMG00000003747	ENSMAMG00000003680	ENSMAMG00000003651	ENSMAMG00000003619	ENSMAMG00000003553	ENSMAMG00000003521	ENSMAMG00000003384	PIK3R1 (ENSMAMG00000003274)	MAST4 (ENSMAMG00000003254)	ENSMAMG00000027694	SREK1 (ENSMAMG00000025104)	erbin (ENSMAMG00000002991)	ENSMAMG00000002497
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.h.b	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156980.a	ENSGT00940000156621.e.b	ENSGT00940000155188.B.a	ENSGT00940000155553.e.a	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT00940000159526
Climbing perch	MODERN SPECIES	3	f2r2.1 (ENSATEG00000029426)	f2rl1.1 (ENSATEG00000026082)	f2rl1.2 (ENSATEG00000008020)	ch25hl2 (ENSATEG00000008028)	s100z (ENSATEG00000008043)	crhbp (ENSATEG00000008060)	PDE8B (ENSATEG00000008314) #9	wdr41 (ENSATEG00000008464) #10	otpa (ENSATEG00000008473) #11	tbca (ENSATEG00000008490) #14	AP3B1 (ENSATEG00000008505) #17	SCAMP1 (ENSATEG00000008541) #18	LHFPL2 (ENSATEG00000008588) #19	ARSB (ENSATEG00000008598)	DMGDH (ENSATEG00000008607) #21	bhmt (ENSATEG00000008673) #22	JMY (ENSATEG00000008706) #27	HOMER1 (ENSATEG00000008778) #29	ENSATEG00000008828	ENSATEG00000008865	ENSATEG00000008918	ENSATEG00000008934	ENSATEG00000008940	ENSATEG00000008962	ENSATEG00000009026	PIK3R1 (ENSATEG00000009334)	MAST4 (ENSATEG00000009382)	ENSATEG00000009435	SREK1 (ENSATEG00000009450)	ENSATEG00000030037	erbin (ENSATEG00000009494)
Siamese fighting fish	MODERN SPECIES	3	SV2C (ENSBSLG00000008749)	f2r2.1 (ENSBSLG00000008727)	f2rl1.1 (ENSBSLG00000008723)	f2rl1.2 (ENSBSLG00000008716)	ch25hl2 (ENSBSLG00000008714)	s100z (ENSBSLG00000008710)	crhbp (ENSBSLG00000008673)	PDE8B (ENSBSLG00000007946) #9	wdr41 (ENSBSLG00000007776) #10	otpa (ENSBSLG00000007751) #11	tbca (ENSBSLG00000007725) #14	AP3B1 (ENSBSLG00000006839) #17	scamp1 (ENSBSLG00000006367) #18	lhfpl2a (ENSBSLG00000005975) #19	DMGDH (ENSBSLG00000005714) #21	bhmt (ENSBSLG00000005481) #22	JMY (ENSBSLG00000005382) #27	ENSBSLG00000005349	HOMER1 (ENSBSLG00000005153) #29	DTWD2 (ENSBSLG00000005111)	tia1 (ENSBSLG00000004847)	C2orf42 (ENSBSLG00000004733)	ENSBSLG00000004349	ZNF703 (ENSBSLG00000004347)	ENSBSLG00000004343	TRAF2 (ENSBSLG00000004338)	ENSBSLG00000003911	pik3r1 (ENSBSLG00000003181)	MAST4 (ENSBSLG00000002687)	ENSBSLG00000002291	srek1 (ENSBSLG00000002262)
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	3	f2r2.1 (ENSMMDG00005005400)	f2rl1.1 (ENSMMDG00005005405)	f2rl1.2 (ENSMMDG00005005408)	ch25hl2 (ENSMMDG00005005410)	s100z (ENSMMDG00005005417)	crhbp (ENSMMDG00005005426)	PDE8B (ENSMMDG00005005550) #9	wdr41 (ENSMMDG00005005908) #10	otpa (ENSMMDG00005005938) #11	tbca (ENSMMDG00005005944) #14	AP3B1 (ENSMMDG00005005969) #17	scamp1 (ENSMMDG00005006270) #18	lhfpl2a (ENSMMDG00005006275) #19	ARSB (ENSMMDG00005006283)	DMGDH (ENSMMDG00005006293) #21	bhmt (ENSMMDG00005006373) #22	bhmt (ENSMMDG00005006407) #22	JMY (ENSMMDG00005006450) #27	HOMER1 (ENSMMDG00005006456) #29	DTWD2 (ENSMMDG00005006498)	C2orf42 (ENSMMDG00005006502)	ZNF703 (ENSMMDG00005006551)	ENSMMDG00005006552	NUP188 (ENSMMDG00005006589)	dolk (ENSMMDG00005009673)	phyhd1 (ENSMMDG00005009679)	lrrc8aa (ENSMMDG00005009686)	dnlz (ENSMMDG00005009688)	uck1 (ENSMMDG00005009693)	rapgef1b (ENSMMDG00005009706)	NTNG2 (ENSMMDG00005010867)
Pinecone sodierfish	MODERN SPECIES	3	f2rl1.1 (ENSMMDG00005005405)	f2rl1.2 (ENSMMDG00005005408)	ch25hl2 (ENSMMDG00005005410)	s100z (ENSMMDG00005005417)	crhbp (ENSMMDG00005005426)	PDE8B (ENSMMDG00005005550) #9	wdr41 (ENSMMDG00005005908) #10	otpa (ENSMMDG00005005938) #11	tbca (ENSMMDG00005005944) #14	AP3B1 (ENSMMDG00005005969) #17	scamp1 (ENSMMDG00005006270) #18	lhfpl2a (ENSMMDG00005006275) #19	ARSB (ENSMMDG00005006283)	DMGDH (ENSMMDG00005006293) #21	bhmt (ENSMMDG00005006373) #22	bhmt (ENSMMDG00005006407) #22	JMY (ENSMMDG00005006450) #27	HOMER1 (ENSMMDG00005006456) #29	DTWD2 (ENSMMDG00005006498)	C2orf42 (ENSMMDG00005006502)	ZNF703 (ENSMMDG00005006551)	ENSMMDG00005006552	NUP188 (ENSMMDG00005006589)	dolk (ENSMMDG00005009673)	phyhd1 (ENSMMDG00005009679)	lrrc8aa (ENSMMDG00005009686)	dnlz (ENSMMDG00005009688)	uck1 (ENSMMDG00005009693)	rapgef1b (ENSMMDG00005009706)	NTNG2 (ENSMMDG00005010867)	dolpp1 (ENSMMDG00005010869)
Cod	MODERN SPECIES	17	f2rl1.1 (ENSGMOG00000001234)	f2rl1.1 (ENSGMOG00000027511)	f2rl1.1 (ENSGMOG00000031845)	f2rl1.2 (ENSGMOG00000034124)	ch25hl2 (ENSGMOG00000019768)	s100z (ENSGMOG00000022360)	crhbp (ENSGMOG00000001248)	PDE8B (ENSGMOG00000008392) #9	wdr41 (ENSGMOG00000008396) #10	otpa (ENSGMOG00000033256) #11	tbca (ENSGMOG00000008399) #14	AP3B1 (ENSGMOG00000008400) #17	LHFPL2 (ENSGMOG00000025040) #19	ARSB (ENSGMOG00000008406)	DMGDH (ENSGMOG00000008408) #21	bhmt (ENSGMOG00000008411) #22	JMY (ENSGMOG00000034971) #27	HOMER1 (ENSGMOG00000008419) #29	ENSGMOG00000028315	ENSGMOG00000008423	ENSGMOG00000027352	ENSGMOG00000024352	ENSGMOG00000033908	ENSGMOG00000032551	ENSGMOG00000008430	ENSGMOG00000008434	ENSGMOG00000008435	ENSGMOG00000013216	ENSGMOG00000013266	ENSGMOG00000013276	ENSGMOG00000018740
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.b.j	ENSGT00940000163793.A.a	ENSGT00940000161125	ENSGT00390000001362.b	ENSGT00730000111121 #7	ENSGT00940000157817 #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b #11	ENSGT00390000009710 #14	ENSGT00940000157603 #17	ENSGT00940000157310.g #18	ENSGT00990000203589.b.b #19	ENSGT00940000158270	ENSGT00940000158176 #21	ENSGT00390000003122.a.a.a #22	ENSGT00510000046704.b.a.c #27	ENSGT00940000156354.p #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c	ENSGT00940000156168.B	ENSGT00940000155068.a.a	ENSGT00940000155847	ENSGT00940000164699	ENSGT00940000157038.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a	ENSGT00940000164226.a.b	ENSGT00940000155782.i
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	194						ENSGT00390000001362.b.g	ENSGT00730000111121.d #7	ENSGT00940000157817.e #9	ENSGT00940000159952.a.b.b #11	ENSGT00390000009710.b #14	ENSGT00940000157603.fb.b #17	ENSGT00940000157310.g.b #18	ENSGT00990000203589.b.b.g #19	ENSGT00940000158270	ENSGT00940000158176.b #21	ENSGT00390000003122.a.a.a.e #22	ENSGT00510000046704.b.a.c.g #27	ENSGT00940000156354.p.b #29	ENSGT00940000154962.A.a.b.a.b	ENSGT00390000014618.b.c.d	ENSGT00940000156168.B.z	ENSGT00940000155068.a.a.a	ENSGT00940000155847	ENSGT00940000164699.v	ENSGT00940000157038.a.b.eb	ENSGT00390000011010.a.a.q	ENSGT00940000164226.a.b.c	ENSGT00940000155782.i.b	ENSGT00390000009948.d.j	ENSGT00940000155860.b.b	ENSGT00390000005989.b.b.e
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.a.h.a.e	ENSGT01050000244840.A.a.a.h.b.j	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d	ENSGT00390000001362.b.g	ENSGT00730000111121.d #7	ENSGT00940000157817.e #9	ENSGT00940000159952.a.b.b #11	ENSGT00390000009710.a #14	ENSGT00940000157603.fb.b #17	ENSGT00940000157310.g.b #18	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #19	ENSGT00940000158270	ENSGT00940000158176.b #21	ENSGT00390000003122.a.a.a.e #22	ENSGT00510000046704.b.a.c.g #27	ENSGT00940000156354.p.b #29	ENSGT00940000154962.A.a.b.a.b	ENSGT00390000014618.b.c.d	ENSGT00940000156168.B.z	ENSGT00940000155068.a.a.a	ENSGT00940000155847	ENSGT00940000164699.v	ENSGT00940000157038.a.b.eb	ENSGT00390000011010.a.a.q	ENSGT00940000164226.a.b.c	ENSGT00940000155782.i.b	ENSGT00390000009948.d.j	ENSGT00940000155860.b.b	ENSGT00390000005989.b.b.e
Salmo	ANCESTRAL SPECIES	1	ENSGT01050000244840.A.a.a.h.b.j	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d	ENSGT00390000001362.b.g	ENSGT00730000111121.d #7	ENSGT00940000157817.e #9	ENSGT00940000159952.a.b.b #11	ENSGT00390000009710.b #14	ENSGT00390000009710.a #14	ENSGT00940000157603.fb.b #17	ENSGT00940000157310.g.b #18	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #19	ENSGT00940000158270	ENSGT00940000158176.b #21	ENSGT00390000003122.a.a.a.e #22	ENSGT00510000046704.b.a.c.g #27	ENSGT00940000156354.p.b #29	ENSGT00940000154962.A.a.b.a.b	ENSGT00390000014618.b.c.d	ENSGT00940000156168.B.z	ENSGT00940000155068.a.a.a	ENSGT00940000155847	ENSGT00940000164699.v	ENSGT00940000157038.a.b.eb	ENSGT00390000011010.a.a.q	ENSGT00940000164226.a.b.c	ENSGT00940000155782.i.b	ENSGT00390000009948.d.j	ENSGT00940000155860.b.b	ENSGT00390000005989.b.b.e
Atlantic salmon	MODERN SPECIES	2	ch25hl2 (ENSSSAG00000113693)	s100z (ENSSSAG00000112998)	crhbp (ENSSSAG00000077468)	aggf1 (ENSSSAG00000077434) #7	PDE8B (ENSSSAG00000078477) #9	ENSSSAG00000089049	otpa (ENSSSAG00000100514) #11	tbca (ENSSSAG00000077412) #14	ENSSSAG00000091845	AP3B1 (ENSSSAG00000076252) #17	ENSSSAG00000099787	SCAMP1 (ENSSSAG00000076200) #18	LHFPL2 (ENSSSAG00000076195) #19	arsb (ENSSSAG00000076193)	DMGDH (ENSSSAG00000076180) #21	bhmt (ENSSSAG00000076167) #22	ENSSSAG00000106565	JMY (ENSSSAG00000076160) #27	ENSSSAG00000089866	HOMER1 (ENSSSAG00000087394) #29	ENSSSAG00000075527	ENSSSAG00000112628	ENSSSAG00000103514	ENSSSAG00000116632	ENSSSAG00000075429	dusp11 (ENSSSAG00000082908)	ENSSSAG00000110436	ENSSSAG00000075408	tcf7l1a (ENSSSAG00000091767)	COX5B (ENSSSAG00000075382)	ENSSSAG00000117499
River trout	MODERN SPECIES	3	f2rl1.1 (ENSSTUG00000010502)	f2rl1.2 (ENSSTUG00000010495)	ch25hl2 (ENSSTUG00000010489)	s100z (ENSSTUG00000010478)	crhbp (ENSSTUG00000010464)	aggf1 (ENSSTUG00000010412) #7	PDE8B (ENSSTUG00000010269) #9	ENSSTUG00000010259	otpa (ENSSTUG00000010242) #11	tbca (ENSSTUG00000010231) #14	AP3B1 (ENSSTUG00000007196) #17	ENSSTUG00000007106	scamp1 (ENSSTUG00000007065) #18	lhfpl2a (ENSSTUG00000007040) #19	ARSB (ENSSTUG00000007026)	bhmt (ENSSTUG00000006978) #22	JMY (ENSSTUG00000006925) #27	HOMER1 (ENSSTUG00000006894) #29	tia1 (ENSSTUG00000006490)	ZNF703 (ENSSTUG00000006469)	GFRA2 (ENSSTUG00000006440)	ENSSTUG00000006301	dusp11 (ENSSTUG00000006269)	ENSSTUG00000006244	tcf7l1a (ENSSTUG00000006221)	ENSSTUG00000006194	npy8ar (ENSSTUG00000006187)	actr1b (ENSSTUG00000005819)	marchf5l (ENSSTUG00000005777)	FGFR1 (ENSSTUG00000005535)	stc1l (ENSSTUG00000005489)
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT01050000244840.A.a.a.h.b.j	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d	ENSGT00390000001362.b.g	ENSGT00730000111121.d #7	ENSGT00940000157817.e #9	ENSGT00940000159952.a.b.b #11	ENSGT00390000009710.a.a #14	ENSGT00390000009710.b #14	ENSGT00940000157603.fb.b #17	ENSGT00940000157310.g.b #18	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #19	ENSGT00940000158270	ENSGT00940000158176.b #21	ENSGT00390000003122.a.a.a.e #22	ENSGT00510000046704.b.a.c.g #27	ENSGT00940000156354.p.b #29	ENSGT00940000154962.A.a.b.a.b	ENSGT00390000014618.b.c.d	ENSGT00940000156168.B.z	ENSGT00940000155068.a.a.a	ENSGT00940000155847	ENSGT00940000164699.v	ENSGT00940000157038.a.b.eb	ENSGT00390000011010.a.a.q	ENSGT00940000164226.a.b.c	ENSGT00940000155782.i.b	ENSGT00390000009948.d.j	ENSGT00940000155860.b.b	ENSGT00390000005989.b.b.e
Rainbow trout	MODERN SPECIES	364	ch25hl2 (ENSOMYG00000032508)	s100z (ENSOMYG00000032501)	crf-bp (ENSOMYG00000071371)	aggf1 (ENSOMYG00000032485) #7	PDE8B (ENSOMYG00000032379) #9	otpa (ENSOMYG00000032321) #11	tbca (ENSOMYG00000050741) #14	ENSOMYG00000060792	AP3B1 (ENSOMYG00000030926) #17	SCAMP1 (ENSOMYG00000023337) #18	ENSOMYG00000030518	LHFPL2 (ENSOMYG00000030501) #19	ARSB (ENSOMYG00000030463)	DMGDH (ENSOMYG00000030429) #21	ENSOMYG00000069246	bhmt (ENSOMYG00000030375) #22	JMY (ENSOMYG00000030347) #27	HOMER1 (ENSOMYG00000030318) #29	ENSOMYG00000049919	ENSOMYG00000075983	ENSOMYG00000030239	ENSOMYG00000030218	ENSOMYG00000053964	ENSOMYG00000029918	dusp11 (ENSOMYG00000029673)	ENSOMYG00000029622	tcf7l1a (ENSOMYG00000029518)	ENSOMYG00000029495	ENSOMYG00000029469	ENSOMYG00000029230	ENSOMYG00000049452
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT01050000244840.A.b.b.b.c	ENSGT01050000244840.A.a.b.f.i	ENSGT01050000244840.A.a.a.h.b.j	ENSGT00940000163793.A.a.h	ENSGT00940000161125.d	ENSGT00390000001362.b.g	ENSGT00730000111121.d #7	ENSGT00940000157817.e #9	ENSGT00940000159952.a.b.b #11	ENSGT00390000009710.b #14	ENSGT00940000157603.fb.b #17	ENSGT00940000157310.g.b #18	ENSGT00990000204064.a.a.b	ENSGT00990000203589.b.b.g #19	ENSGT00940000158270	ENSGT00390000003122.a.a.a.e #22	ENSGT00510000046704.b.a.c.g #27	ENSGT00940000156354.p.b #29	ENSGT00940000154962.A.a.b.a.b	ENSGT00390000014618.b.c.d	ENSGT00940000156168.B.z	ENSGT00940000155068.a.a.a	ENSGT00940000155847	ENSGT00940000164699.v	ENSGT00940000157038.a.b.eb	ENSGT00390000011010.a.a.q	ENSGT00940000164226.a.b.c	ENSGT00940000155782.i.b	ENSGT00390000009948.d.j	ENSGT00940000155860.b.b	ENSGT00390000005989.b.b.e
Chinook salmon	MODERN SPECIES	26	SV2C (ENSOTSG00005011627)	F2RL2 (ENSOTSG00005011629)	F2R (ENSOTSG00005011630)	f2rl1.2 (ENSOTSG00005011631)	ch25hl2 (ENSOTSG00005011632)	crhbp (ENSOTSG00005011633)	aggf1 (ENSOTSG00005011635) #7	PDE8B (ENSOTSG00005011643) #9	otpa (ENSOTSG00005011703) #11	tbca (ENSOTSG00005011704) #14	AP3B1 (ENSOTSG00005011705) #17	scamp1 (ENSOTSG00005011965) #18	ENSOTSG00005011967	lhfpl2a (ENSOTSG00005011968) #19	ARSB (ENSOTSG00005011970)	bhmt (ENSOTSG00005011972) #22	JMY (ENSOTSG00005012074) #27	HOMER1 (ENSOTSG00005012085) #29	ENSOTSG00005012183	ENSOTSG00005013031	ZNF703 (ENSOTSG00005013033)	GFRA2 (ENSOTSG00005013034)	ENSOTSG00005013042	dusp11 (ENSOTSG00005013179)	ENSOTSG00005013181	tcf7l1a (ENSOTSG00005013182)	COX5B (ENSOTSG00005013183)	npy8ar (ENSOTSG00005013184)	actr1b (ENSOTSG00005013187)	marchf5l (ENSOTSG00005013403)	FGFR1 (ENSOTSG00005013520)
Coho salmon	MODERN SPECIES	21	f2rl1.2 (ENSOKIG00005049249)	ch25hl2 (ENSOKIG00005049253)	s100z (ENSOKIG00005049257)	crhbp (ENSOKIG00005049260)	aggf1 (ENSOKIG00005049268) #7	PDE8B (ENSOKIG00005049318) #9	ENSOKIG00005049404	otpa (ENSOKIG00005049408) #11	tbca (ENSOKIG00005049413) #14	AP3B1 (ENSOKIG00005049495) #17	scamp1 (ENSOKIG00005049660) #18	ENSOKIG00005049665	LHFPL2 (ENSOKIG00005049668) #19	ENSOKIG00005049671	ARSB (ENSOKIG00005038211)	bhmt (ENSOKIG00005039211) #22	JMY (ENSOKIG00005039343) #27	HOMER1 (ENSOKIG00005039439) #29	ENSOKIG00005039711	ENSOKIG00005040965	ZNF703 (ENSOKIG00005040977)	GFRA2 (ENSOKIG00005040990)	ATP6V1B2 (ENSOKIG00005041039)	ENSOKIG00005041468	TCF7L1 (ENSOKIG00005041482)	COX5B (ENSOKIG00005041507)	npy8ar (ENSOKIG00005041585)	ACTR1A (ENSOKIG00005041614)	ENSOKIG00005041858	FGFR1 (ENSOKIG00005041930)	stc1l (ENSOKIG00005041995)
Huchen	MODERN SPECIES	169				crhbp (ENSHHUG00000023760)	aggf1 (ENSHHUG00000023731) #7	PDE8B (ENSHHUG00000023579) #9	otpa (ENSHHUG00000023571) #11	tbca (ENSHHUG00000023555) #14	AP3B1 (ENSHHUG00000023172) #17	ENSHHUG00000023166	scamp1 (ENSHHUG00000023139) #18	ENSHHUG00000023136	lhfpl2a (ENSHHUG00000023133) #19	ARSB (ENSHHUG00000023127)	DMGDH (ENSHHUG00000023107) #21	bhmt (ENSHHUG00000023086) #22	JMY (ENSHHUG00000023068) #27	HOMER1 (ENSHHUG00000023043) #29	tia1 (ENSHHUG00000022881)	ENSHHUG00000022873	ZNF703 (ENSHHUG00000022869)	GFRA2 (ENSHHUG00000022854)
Salmoninae	ANCESTRAL SPECIES	47	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.b.i	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c	ENSGT00390000001362.b.h	ENSGT00730000111121.c #7	ENSGT00940000157817.f #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b.a #11	ENSGT00390000009710.a #14	ENSGT00940000157603.fb.a #17	ENSGT00940000157310.g.a #18	ENSGT00990000203589.b.b.h #19	ENSGT00940000158176.a #21	ENSGT00390000003122.a.a.a.f #22	ENSGT00510000046704.b.a.c.h #27	ENSGT00940000156354.p.a #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c.c	ENSGT00940000156168.B.y	ENSGT00940000155068.a.a.b	ENSGT00940000164699.u	ENSGT00940000157038.a.b.db	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.r	ENSGT00940000164226.a.b.d	ENSGT00940000155782.i.a	ENSGT00390000009948.d.i
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.b.i	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c	ENSGT00390000001362.b.h	ENSGT00730000111121.c #7	ENSGT00940000157817.f #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b.a #11	ENSGT00390000009710.b #14	ENSGT00940000157603.fb.a #17	ENSGT00940000157310.g.a #18	ENSGT00990000203589.b.b.h #19	ENSGT00940000158176.a #21	ENSGT00390000003122.a.a.a.f #22	ENSGT00510000046704.b.a.c.h #27	ENSGT00940000156354.p.a #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c.c	ENSGT00940000156168.B.y	ENSGT00940000155068.a.a.b	ENSGT00940000164699.u	ENSGT00940000157038.a.b.db	ENSGT00940000156732.a.b.a	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.r	ENSGT00940000164226.a.b.d	ENSGT00940000155782.i.a
Salmo	ANCESTRAL SPECIES		ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c	ENSGT00390000001362.b.h	ENSGT00730000111121.c #7	ENSGT00940000157817.f #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b.a #11	ENSGT00940000170540	ENSGT00940000157603.fb.a #17	ENSGT00940000157310.g.a #18	ENSGT00990000203589.b.b.h #19	ENSGT01100000263538.A.a.a.b.b.m	ENSGT00940000158176.a #21	ENSGT00390000003122.a.a.a.f #22	ENSGT00510000046704.b.a.c.h #27	ENSGT00940000156354.p.a #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c.c	ENSGT00940000156168.B.y	ENSGT00940000155068.a.a.b	ENSGT00940000164699.u	ENSGT00940000157038.a.b.db	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.r	ENSGT00940000164226.a.b.d	ENSGT00940000155782.i.a	ENSGT00390000009948.d.i
Atlantic salmon	MODERN SPECIES		f2rl1.1 (ENSSSAG00000078417)	f2rl1.1 (ENSSSAG00000084722)	ch25hl2 (ENSSSAG00000078425)	s100z (ENSSSAG00000120666)	crhbp (ENSSSAG00000078436)	aggf1 (ENSSSAG00000078440) #7	PDE8B (ENSSSAG00000077426) #9	wdr41 (ENSSSAG00000078906) #10	otp (ENSSSAG00000078916) #11	tbca (ENSSSAG00000078918)	ap3b1 (ENSSSAG00000078995) #17	scamp1 (ENSSSAG00000080106) #18	LHFPL2 (ENSSSAG00000115220) #19	ENSSSAG00000108005	DMGDH (ENSSSAG00000080134) #21	bhmt (ENSSSAG00000080258) #22	JMY (ENSSSAG00000080283) #27	HOMER1 (ENSSSAG00000076069) #29	dtwd2 (ENSSSAG00000080299)	ENSSSAG00000035493	ENSSSAG00000042603	ENSSSAG00000042615	ENSSSAG00000075494	ENSSSAG00000099817	ENSSSAG00000083147	ENSSSAG00000042641	tcf7l1a (ENSSSAG00000075404)	dbnla (ENSSSAG00000042656)	npy8ar (ENSSSAG00000096626)	acty (ENSSSAG00000042725)	ENSSSAG00000042798
River trout	MODERN SPECIES	15	SV2C (ENSSTUG00000038115)	ENSSTUG00000038453	F2RL2 (ENSSTUG00000038460)	F2R (ENSSTUG00000038465)	f2rl1.1 (ENSSTUG00000038471)	f2rl1.1 (ENSSTUG00000038485)	ch25hl2 (ENSSTUG00000038497)	s100z (ENSSTUG00000038505)	crhbp (ENSSTUG00000038512)	aggf1 (ENSSTUG00000038521) #7	AP3B1 (ENSSTUG00000038574) #17	scamp1 (ENSSTUG00000039388) #18	lhfpl2a (ENSSTUG00000039418) #19	ENSSTUG00000039420	DMGDH (ENSSTUG00000039448) #21	bhmt (ENSSTUG00000040918) #22	JMY (ENSSTUG00000041093) #27	HOMER1 (ENSSTUG00000041264) #29	DTWD2 (ENSSTUG00000041448)	tia1 (ENSSTUG00000041520)	C2orf42 (ENSSTUG00000042757)	ZNF703 (ENSSTUG00000042816)	GFRA2 (ENSSTUG00000042863)	ENSSTUG00000042895	ENSSTUG00000042911	tcf7l1a (ENSSTUG00000042938)	ENSSTUG00000043017	ENSSTUG00000043023	ENSSTUG00000043054	COX5B (ENSSTUG00000043068)	npy8ar (ENSSTUG00000043086)
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.b.i	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c	ENSGT00390000001362.b.h	ENSGT00730000111121.c #7	ENSGT00940000157817.f #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b.a #11	ENSGT00390000009710.a.b #14	ENSGT00940000157603.fb.a #17	ENSGT00940000157310.g.a #18	ENSGT00990000203589.b.b.h #19	ENSGT00940000158176.a #21	ENSGT00390000003122.a.a.a.f #22	ENSGT00510000046704.b.a.c.h #27	ENSGT00940000156354.p.a.a #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c.c	ENSGT00940000156168.B.y	ENSGT00940000164699.u	ENSGT00940000157038.a.b.db	ENSGT00940000156732.a.b.a	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.r	ENSGT00940000164226.a.b.d	ENSGT00940000155782.i.a	ENSGT00390000009948.d.i
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.b.i	ENSGT00940000163793.A.a.g	ENSGT00940000161125.c	ENSGT00390000001362.b.h	ENSGT00730000111121.c #7	ENSGT00940000157817.f #9	ENSGT00390000017026 #10	ENSGT00940000159952.a.b.a #11	ENSGT00390000009710.a.b #14	ENSGT00940000157603.gb #17	ENSGT00940000157310.g.a #18	ENSGT00990000203589.b.b.h #19	ENSGT00940000158176.a #21	ENSGT00390000003122.a.a.a.f #22	ENSGT00510000046704.b.a.c.h #27	ENSGT00940000156354.p.a.a #29	ENSGT00390000006867	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000011031	ENSGT00390000014618.b.c.c	ENSGT00940000156168.B.y	ENSGT00940000164699.u	ENSGT00940000157038.a.b.db	ENSGT00940000156732.a.b.a	ENSGT00390000011010.a.a.r	ENSGT00940000164226.a.b.d	ENSGT00940000155782.i.a	ENSGT00390000009948.d.i	ENSGT00940000154314.a
Coho salmon	MODERN SPECIES	15	f2rl1.1 (ENSOKIG00005018474)	f2rl1.2 (ENSOKIG00005018486)	ch25hl2 (ENSOKIG00005018528)	s100z (ENSOKIG00005018551)	crhbp (ENSOKIG00005018561)	aggf1 (ENSOKIG00005018578) #7	PDE8B (ENSOKIG00005018615) #9	wdr41 (ENSOKIG00005018890) #10	otpa (ENSOKIG00005018943) #11	tbca (ENSOKIG00005018976) #14	AP3B1 (ENSOKIG00005019349) #17	SCAMP1 (ENSOKIG00005026634) #18	lhfpl2a (ENSOKIG00005026687) #19	ENSOKIG00005026697	DMGDH (ENSOKIG00005026761) #21	bhmt (ENSOKIG00005027395) #22	JMY (ENSOKIG00005027562) #27	HOMER1 (ENSOKIG00005027685) #29	DTWD2 (ENSOKIG00005027772)	tia1 (ENSOKIG00005027835)	C2orf42 (ENSOKIG00005028631)	ZNF703 (ENSOKIG00005028641)	GFRA2 (ENSOKIG00005028683)	ENSOKIG00005028690	ENSOKIG00005028703	ENSOKIG00005028715	COX5B (ENSOKIG00005028733)	ENSOKIG00005028756	ENSOKIG00005028802	marchf5l (ENSOKIG00005029113)	ENSOKIG00005029140
Chinook salmon	MODERN SPECIES	12	F2RL2 (ENSOTSG00005035390)	F2R (ENSOTSG00005035389)	f2rl1.1 (ENSOTSG00005035388)	f2rl1.1 (ENSOTSG00005035387)	f2rl1.2 (ENSOTSG00005035386)	ch25hl2 (ENSOTSG00005035385)	s100z (ENSOTSG00005035384)	crhbp (ENSOTSG00005035382)	aggf1 (ENSOTSG00005035381) #7	PDE8B (ENSOTSG00005035380) #9	wdr41 (ENSOTSG00005035379) #10	otpa (ENSOTSG00005035378) #11	tbca (ENSOTSG00005035356) #14	ENSOTSG00005035353	DMGDH (ENSOTSG00005033116) #21	bhmt (ENSOTSG00005032687) #22	JMY (ENSOTSG00005032667) #27	HOMER1 (ENSOTSG00005032662) #29	DTWD2 (ENSOTSG00005032660)	tia1 (ENSOTSG00005032437)	C2orf42 (ENSOTSG00005032435)	AP3B1 (ENSOTSG00005024796) #17	scamp1 (ENSOTSG00005024781) #18	lhfpl2a (ENSOTSG00005024779) #19	ZNF703 (ENSOTSG00005024776)	cdk5rap2 (ENSOTSG00005024766)	NUP188 (ENSOTSG00005024399)	dolk (ENSOTSG00005024398)	phyhd1 (ENSOTSG00005024394)	lrrc8aa (ENSOTSG00005024391)	dnlz (ENSOTSG00005024389)
Rainbow trout	MODERN SPECIES	26	ch25hl2 (ENSOMYG00000003453)	s100z (ENSOMYG00000003438)	crhbp (ENSOMYG00000003389)	aggf1 (ENSOMYG00000003353) #7	PDE8B (ENSOMYG00000003268) #9	wdr41 (ENSOMYG00000003184) #10	otpa (ENSOMYG00000003096) #11	tbca (ENSOMYG00000032310) #14	ENSOMYG00000070555	AP3B1 (ENSOMYG00000002708) #17	SCAMP1 (ENSOMYG00000001807) #18	ENSOMYG00000074845	LHFPL2 (ENSOMYG00000001799) #19	ENSOMYG00000001788	DMGDH (ENSOMYG00000001494) #21	bhmt (ENSOMYG00000001033) #22	JMY (ENSOMYG00000001010) #27	HOMER1 (ENSOMYG00000001003) #29	ENSOMYG00000000993	ENSOMYG00000000955	ENSOMYG00000000895	ENSOMYG00000000874	ENSOMYG00000030201	ENSOMYG00000068135	tcf7l1a (ENSOMYG00000000783)	ENSOMYG00000000771	ENSOMYG00000000764	ENSOMYG00000000760	ENSOMYG00000077787	ENSOMYG00000055334	ENSOMYG00000058296
Huchen	MODERN SPECIES	356	F2R (ENSHHUG00000004876)	f2rl1.1 (ENSHHUG00000004874)	f2rl1.1 (ENSHHUG00000004873)	f2rl1.2 (ENSHHUG00000004795)	ch25hl2 (ENSHHUG00000004780)	s100z (ENSHHUG00000004773)	crhbp (ENSHHUG00000004761)	aggf1 (ENSHHUG00000004753) #7	PDE8B (ENSHHUG00000004183) #9	wdr41 (ENSHHUG00000004143) #10	otpa (ENSHHUG00000004114) #11	tbca (ENSHHUG00000004085) #14	AP3B1 (ENSHHUG00000003988) #17	scamp1 (ENSHHUG00000003948) #18	lhfpl2a (ENSHHUG00000003940) #19	bhmt (ENSHHUG00000003824) #22	DMGDH (ENSHHUG00000003757) #21	JMY (ENSHHUG00000003684) #27	HOMER1 (ENSHHUG00000003679) #29	ENSHHUG00000003673 #31	DTWD2 (ENSHHUG00000003670)	tia1 (ENSHHUG00000003497)	C2orf42 (ENSHHUG00000003486)
Northern pike	MODERN SPECIES	13	f2r2.1 (ENSELUG00000007082)	f2rl1.1 (ENSELUG00000006993)	f2rl1.2 (ENSELUG00000006989)	ch25hl2 (ENSELUG00000006977)	s100z (ENSELUG00000006972)	crhbp (ENSELUG00000006962)	aggf1 (ENSELUG00000000226) #7	PDE8B (ENSELUG00000006875) #9	wdr41 (ENSELUG00000006803) #10	otpa (ENSELUG00000006749) #11	tbca (ENSELUG00000006728) #14	AP3B1 (ENSELUG00000006692) #17	scamp1 (ENSELUG00000006644) #18	lhfpl2a (ENSELUG00000006588) #19	ARSB (ENSELUG00000006567)	bhmt (ENSELUG00000006487) #22	DMGDH (ENSELUG00000006530) #21	JMY (ENSELUG00000006465) #27	HOMER1 (ENSELUG00000006436) #29	DTWD2 (ENSELUG00000006394)	tia1 (ENSELUG00000006377)	C2orf42 (ENSELUG00000006346)	ZNF703 (ENSELUG00000006331)	GFRA2 (ENSELUG00000006312)	ATP6V1B2 (ENSELUG00000006287)	dusp11 (ENSELUG00000006242)	ENSELUG00000006202	ENSELUG00000006171	dbnla (ENSELUG00000006097)	cox5b (ENSELUG00000006066)	npy8ar (ENSELUG00000006030)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00390000003122.a.a.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.a.a.b #22
Acanthomorphata	DUPLICATION
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00390000003122.a.a.b.a #22
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949.l	ENSGT01100000263860	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT01050000244968.c.d
Poecilia	ANCESTRAL SPECIES	3	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263860.a.a	ENSGT01100000263860.a.b.a	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT01050000244968.c.d
NAME_6	ANCESTRAL SPECIES	82							ENSGT01100000263860.a.b.a	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT01050000244968.c.d
Sailfin molly	MODERN SPECIES	838									rasgrf2b (ENSPLAG00000000620)	ckmt2a (ENSPLAG00000016707)	ENSPLAG00000016690	otpb (ENSPLAG00000016667) #11	scamp1 (ENSPLAG00000016646) #18	ENSPLAG00000016593 ##19	ENSPLAG00000016587 #22	ENSPLAG00000016568 #22	mrps36 (ENSPLAG00000016546)	pdxp (ENSPLAG00000016539)	spef2 (ENSPLAG00000016505)
Amazon molly	MODERN SPECIES	340									msh3 (ENSPFOG00000000563)	rasgrf2b (ENSPFOG00000000906)	ckmt2a (ENSPFOG00000001185)	ENSPFOG00000001274	otpb (ENSPFOG00000001352) #11	scamp1 (ENSPFOG00000001460) #18	ENSPFOG00000001608 ##19	ENSPFOG00000001689 #22	mrps36 (ENSPFOG00000001860)	pdxp (ENSPFOG00000001900)	ENSPFOG00000001952	ENSPFOG00000002120	ENSPFOG00000002245	cdo1 (ENSPFOG00000002497)	AP3S1 (ENSPFOG00000002499)	COMMD10 (ENSPFOG00000002561)	sema6a (ENSPFOG00000002593)	SEMA6A (ENSPFOG00000002874)	DMXL1 (ENSPFOG00000003104)	hsd17b4 (ENSPFOG00000004195)	prr16 (ENSPFOG00000005157)	ENSPFOG00000005168	ENSPFOG00000005191
Guppy	MODERN SPECIES	461	gpat2 (ENSPREG00000012304)	adra2b (ENSPREG00000012347)	dusp2 (ENSPREG00000012357)	MYORG (ENSPREG00000012392)	ENSPREG00000012422	ENSPREG00000012429	ENSPREG00000012444	ENSPREG00000012458	msh3 (ENSPREG00000012499)	rasgrf2b (ENSPREG00000012616)	ckmt2a (ENSPREG00000012749)	ENSPREG00000012790	scamp1 (ENSPREG00000012821) #18	ENSPREG00000012842 ##19	ENSPREG00000012851 #22	ENSPREG00000012871 #22	mrps36 (ENSPREG00000012889)	pdxp (ENSPREG00000012937)	ENSPREG00000012976	ENSPREG00000013094	ENSPREG00000013125	cdo1 (ENSPREG00000013161)	AP3S1 (ENSPREG00000013270)	COMMD10 (ENSPREG00000013739)	sema6a (ENSPREG00000013871)	DMXL1 (ENSPREG00000014068)	hsd17b4 (ENSPREG00000014297)	prr16 (ENSPREG00000014370)	ENSPREG00000014376	ENSPREG00000014387	CSGALNACT1 (ENSPREG00000014398)
Platyfish	MODERN SPECIES	3	GOLM1 (ENSXMAG00000016871)	ENSXMAG00000022545	naa35 (ENSXMAG00000016788)	agtpbp1 (ENSXMAG00000016766)	NTRK2 (ENSXMAG00000016744)	msh3 (ENSXMAG00000016720)	ENSXMAG00000025083	ENSXMAG00000022534	rasgrf2b (ENSXMAG00000016680)	ckmt2a (ENSXMAG00000016636)	ENSXMAG00000016619	otpb (ENSXMAG00000016614) #11	scamp1 (ENSXMAG00000024922) #18	ENSXMAG00000016575 ##19	ENSXMAG00000016568 #22	ENSXMAG00000022438 #22	mrps36 (ENSXMAG00000016548)	pdxp (ENSXMAG00000016546)	ENSXMAG00000016495	ENSXMAG00000016494	ENSXMAG00000016486	cdo1 (ENSXMAG00000029910)	AP3S1 (ENSXMAG00000016466)	COMMD10 (ENSXMAG00000016453)	sema6a (ENSXMAG00000021461)	DMXL1 (ENSXMAG00000016332)	hsd17b4 (ENSXMAG00000016234)	prr16 (ENSXMAG00000022156)	ENSXMAG00000016227	ENSXMAG00000020971	CSGALNACT1 (ENSXMAG00000016212)
NAME_4	ANCESTRAL SPECIES	24	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Mummichog	MODERN SPECIES	2272	zgc:152830 (ENSFHEG00000021752)	FAHD2A (ENSFHEG00000021680)	gpat2 (ENSFHEG00000021629)	adra2b (ENSFHEG00000021618)	dusp2 (ENSFHEG00000021610)	MYORG (ENSFHEG00000021601)	ENSFHEG00000021578	ENSFHEG00000021566	msh3 (ENSFHEG00000021546)	rasgrf2b (ENSFHEG00000021480)	ckmt2a (ENSFHEG00000021390)	ENSFHEG00000021363	otpb (ENSFHEG00000021353) #11	ENSFHEG00000021333 ##19	ENSFHEG00000021313 #22	ENSFHEG00000021297 #22	mrps36 (ENSFHEG00000021291)	pdxp (ENSFHEG00000021262)	spef2 (ENSFHEG00000021227)	ENSFHEG00000000869	ENSFHEG00000020410	cdo1 (ENSFHEG00000000590)	AP3S1 (ENSFHEG00000020380)	COMMD10 (ENSFHEG00000020362)	sema6a (ENSFHEG00000020352)	sema6a (ENSFHEG00000020341)	DMXL1 (ENSFHEG00000020309)	hsd17b4 (ENSFHEG00000020106)	prr16 (ENSFHEG00000019618)	ENSFHEG00000019603	ENSFHEG00000019586
Sheepshead minnow	MODERN SPECIES	129								rasgrf2b (ENSCVAG00000012271)	ckmt2a (ENSCVAG00000012125)	ENSCVAG00000012082	otpb (ENSCVAG00000012046) #11	ENSCVAG00000012021	scamp1 (ENSCVAG00000011999) #18	ENSCVAG00000011934 ##19	ENSCVAG00000000311 #22	ENSCVAG00000011172 #22	mrps36 (ENSCVAG00000011133)	pdxp (ENSCVAG00000011119)	ENSCVAG00000011113	ENSCVAG00000011096	cdo1 (ENSCVAG00000011082)	ENSCVAG00000011064	kirrel1b (ENSCVAG00000011050)	cadm3 (ENSCVAG00000010999)	sdhc (ENSCVAG00000010974)	atp1a2a (ENSCVAG00000010938)	mpz (ENSCVAG00000010871)	lig1 (ENSCVAG00000010811)	ENSCVAG00000010792	PIP4P1 (ENSCVAG00000010774)	dnaaf6 (ENSCVAG00000010737)
Aplocheiloidei	ANCESTRAL SPECIES	21	ENSGT00940000166311	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01030000235339	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Turquoise killifish	MODERN SPECIES	1627	pcna (ENSNFUG00015014638)	FAHD2A (ENSNFUG00015014502)	gpat2 (ENSNFUG00015014453)	ADRA2B (ENSNFUG00015014444)	DUSP2 (ENSNFUG00015014438)	KIAA1161 (ENSNFUG00015014422)	ENSNFUG00015014407	ENSNFUG00015014390	msh3 (ENSNFUG00015013228)	ENSNFUG00015013185	ckmt2a (ENSNFUG00015013170)	ENSNFUG00015013160	otpb (ENSNFUG00015013153) #11	Nfu_g_1_009407 (ENSNFUG00015013128) #18	ENSNFUG00015013122 ##19	ENSNFUG00015012931 #22	MRPS36 (ENSNFUG00015012923)	PDXP (ENSNFUG00015012917)	LIFRA (ENSNFUG00015012860)	ENSNFUG00015012851	CDO1 (ENSNFUG00015012843)	AP3S1 (ENSNFUG00015012824)	COMMD10 (ENSNFUG00015012814)	sema6a (ENSNFUG00015012748)	DMXL1 (ENSNFUG00015012627)	hsd17b4 (ENSNFUG00015012592)	PRR16 (ENSNFUG00015012584)	ENSNFUG00015012581	SH2B3 (ENSNFUG00015012577)	ATXN2 (ENSNFUG00015011645)	OSTF1 (ENSNFUG00015011566)
Oryzias	ANCESTRAL SPECIES	7	ENSGT00390000004965	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00390000004965	ENSGT00530000063255.C	ENSGT00940000166311	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Indian medaka	MODERN SPECIES	11	zgc:152830 (ENSOMEG00000018458)	fahd2a (ENSOMEG00000018473)	gpat2 (ENSOMEG00000018563)	adra2b (ENSOMEG00000018593)	dusp2 (ENSOMEG00000018612)	MYORG (ENSOMEG00000018651)	ENSOMEG00000018671	ENSOMEG00000018681	msh3 (ENSOMEG00000018740)	rasgrf2b (ENSOMEG00000000805)	ckmt2a (ENSOMEG00000018857)	ENSOMEG00000018866	otpb (ENSOMEG00000000708) #11	scamp1 (ENSOMEG00000018965) #18	ENSOMEG00000018996 ##19	ENSOMEG00000019041 #22	mrps36 (ENSOMEG00000019062)	pdxp (ENSOMEG00000019075)	spef2 (ENSOMEG00000019266)	lifra (ENSOMEG00000019414)	ENSOMEG00000019434	cdo1 (ENSOMEG00000019463)	AP3S1 (ENSOMEG00000019507)	COMMD10 (ENSOMEG00000019553)	sema6a (ENSOMEG00000019695)	DMXL1 (ENSOMEG00000019793)	hsd17b4 (ENSOMEG00000019866)	prr16 (ENSOMEG00000019888)	ENSOMEG00000019930	atxn2 (ENSOMEG00000020080)	mapkapk5 (ENSOMEG00000020161)
Javanese ricefish	MODERN SPECIES	23	ENSOJAG00000007993	pcna (ENSOJAG00000008050)	zgc:152830 (ENSOJAG00000008090)	fahd2a (ENSOJAG00000008162)	gpat2 (ENSOJAG00000008212)	adra2b (ENSOJAG00000008321)	dusp2 (ENSOJAG00000008331)	MYORG (ENSOJAG00000008347)	ENSOJAG00000008360	msh3 (ENSOJAG00000008533)	rasgrf2b (ENSOJAG00000010445)	ENSOJAG00000010872	otpb (ENSOJAG00000010884) #11	scamp1 (ENSOJAG00000010921) #18	ENSOJAG00000010987 ##19	ENSOJAG00000011001 #22	mrps36 (ENSOJAG00000011085)	pdxp (ENSOJAG00000011099)	spef2 (ENSOJAG00000011132)	lifra (ENSOJAG00000011198)	ENSOJAG00000011230	cdo1 (ENSOJAG00000011296)	AP3S1 (ENSOJAG00000011328)	COMMD10 (ENSOJAG00000011442)	sema6a (ENSOJAG00000011490)	DMXL1 (ENSOJAG00000006307)	hsd17b4 (ENSOJAG00000012252)	prr16 (ENSOJAG00000015872)	ENSOJAG00000015878	ENSOJAG00000015898	ENSOJAG00000015920
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00390000004965	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287.c	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Chinese medaka	MODERN SPECIES	1064								adra2b (ENSOSIG00000023268)	dusp2 (ENSOSIG00000023264)	MYORG (ENSOSIG00000023261)	msh3 (ENSOSIG00000023233)	RASGRF2 (ENSOSIG00000023203)	otpb (ENSOSIG00000023187) #11	scamp1 (ENSOSIG00000023152) #18	ENSOSIG00000023133 ##19	ENSOSIG00000023128 #22	mrps36 (ENSOSIG00000023119)	pdxp (ENSOSIG00000023115)	ENSOSIG00000023114	lifra (ENSOSIG00000023111)	ENSOSIG00000023102	ENSOSIG00000023099	cdo1 (ENSOSIG00000023095)	AP3S1 (ENSOSIG00000023091)	ENSOSIG00000023088	COMMD10 (ENSOSIG00000023086)	sema6a (ENSOSIG00000022449)	DMXL1 (ENSOSIG00000022351)	hsd17b4 (ENSOSIG00000022251)	prr16 (ENSOSIG00000022159)	ENSOSIG00000022156
Japanese Medaka HdrR	MODERN SPECIES	23	gpat2 (ENSORLG00000003003)	adra2b (ENSORLG00000003027)	dusp2 (ENSORLG00000003043)	ENSORLG00000003057	ENSORLG00000027682	ENSORLG00000003060	ENSORLG00000027888	ENSORLG00000027894	msh3 (ENSORLG00000003076)	rasgrf2b (ENSORLG00000003190)	CKMT2 (ENSORLG00000003211)	ENSORLG00000003230	otpb (ENSORLG00000025542) #11	SCAMP1 (ENSORLG00000003266) #18	ENSORLG00000003278 ##19	ENSORLG00000003310 #22	pdxp (ENSORLG00000024748)	mrps36 (ENSORLG00000028218)	spef2 (ENSORLG00000003349)	lifra (ENSORLG00000003358)	ENSORLG00000003378	cdo1 (ENSORLG00000003390)	AP3S1 (ENSORLG00000003409)	COMMD10 (ENSORLG00000003421)	ENSORLG00000027333	sema6a (ENSORLG00000003447)	DMXL1 (ENSORLG00000003487)	hsd17b4 (ENSORLG00000003551)	prr16 (ENSORLG00000022815)	ENSORLG00000003569	atxn2 (ENSORLG00000003606)
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263927	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263927	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c	ENSGT01070000253853.e.a	ENSGT01070000253853.e.b.a	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c	ENSGT01070000253853.e.a	ENSGT01070000253853.e.b.a	ENSGT01070000253853.e.b.b	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c.b	ENSGT01070000253853.e.a.c	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Burton s mouthbrooder	MODERN SPECIES	296	adra2b (ENSHBUG00000001834)	dusp2 (ENSHBUG00000001839)	MYORG (ENSHBUG00000001852)	ENSHBUG00000001862	ENSHBUG00000001868	ENSHBUG00000001875	ENSHBUG00000001881	msh3 (ENSHBUG00000001900)	rasgrf2b (ENSHBUG00000001955)	ckmt2a (ENSHBUG00000001998)	ENSHBUG00000002007	ENSHBUG00000002020	otpb (ENSHBUG00000002023) #11	scamp1 (ENSHBUG00000002039) #18	ENSHBUG00000002051 ##19	ENSHBUG00000002068 #22	mrps36 (ENSHBUG00000002117)	pdxp (ENSHBUG00000002129)	spef2 (ENSHBUG00000002462)	lifra (ENSHBUG00000002560)	ENSHBUG00000002574	cdo1 (ENSHBUG00000002592)	AP3S1 (ENSHBUG00000002605)	COMMD10 (ENSHBUG00000002629)	sema6a (ENSHBUG00000002682)	DMXL1 (ENSHBUG00000002746)	hsd17b4 (ENSHBUG00000002823)	prr16 (ENSHBUG00000002839)	ENSHBUG00000002848	ENSHBUG00000002855	atxn2 (ENSHBUG00000002921)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c.a	ENSGT01100000263649.c.b	ENSGT01070000253853.e.a.c	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c.b	ENSGT01070000253853.e.a.c	ENSGT01070000253853.e.b.b	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Eastern happy	MODERN SPECIES	3	dusp2 (ENSACLG00000011943)	ENSACLG00000011947	MYORG (ENSACLG00000011967)	ENSACLG00000011999	ENSACLG00000012012	ENSACLG00000012050	ENSACLG00000012061	msh3 (ENSACLG00000012067)	rasgrf2b (ENSACLG00000012112)	ckmt2a (ENSACLG00000012315)	ENSACLG00000012399	ENSACLG00000012415	otpb (ENSACLG00000012425) #11	scamp1 (ENSACLG00000012450) #18	ENSACLG00000012506 ##19	ENSACLG00000012537 #22	mrps36 (ENSACLG00000012574)	pdxp (ENSACLG00000012686)	ENSACLG00000012693	lifra (ENSACLG00000012702)	ENSACLG00000013069	cdo1 (ENSACLG00000013072)	AP3S1 (ENSACLG00000013077)	COMMD10 (ENSACLG00000013081)	sema6a (ENSACLG00000013097)	DMXL1 (ENSACLG00000013246)	hsd17b4 (ENSACLG00000013301)	prr16 (ENSACLG00000013331)	ENSACLG00000013336	ENSACLG00000013342	atxn2 (ENSACLG00000013359)
Zebra mbuna	MODERN SPECIES	1094	MYORG (ENSMZEG00005009348)	ENSMZEG00005009338	ENSMZEG00005009335	ENSMZEG00005009326	ENSMZEG00005009319	ENSMZEG00005009311	msh3 (ENSMZEG00005009271)	rasgrf2b (ENSMZEG00005009197)	ckmt2a (ENSMZEG00005009166)	ENSMZEG00005009151	ENSMZEG00005009140	ENSMZEG00005009127	otpb (ENSMZEG00005009113) #11	scamp1 (ENSMZEG00005009067) #18	ENSMZEG00005009044 ##19	ENSMZEG00005009004 #22	mrps36 (ENSMZEG00005008995)	pdxp (ENSMZEG00005008982)	ENSMZEG00005008970	lifra (ENSMZEG00005008952)	ENSMZEG00005008936	cdo1 (ENSMZEG00005008922)	AP3S1 (ENSMZEG00005008898)	COMMD10 (ENSMZEG00005008881)	sema6a (ENSMZEG00005008800)	DMXL1 (ENSMZEG00005008659)	hsd17b4 (ENSMZEG00005008558)	prr16 (ENSMZEG00005008534)	ENSMZEG00005008527	ENSMZEG00005008518	atxn2 (ENSMZEG00005008476)
P. nyererei	MODERN SPECIES	408					ENSPNYG00000018187	ENSPNYG00000018183	msh3 (ENSPNYG00000018144)	rasgrf2b (ENSPNYG00000018007)	ckmt2a (ENSPNYG00000017975)	ENSPNYG00000017962	ENSPNYG00000017906	otpb (ENSPNYG00000017891) #11	scamp1 (ENSPNYG00000017880) #18	ENSPNYG00000017864 ##19	ENSPNYG00000017850 #22	ENSPNYG00000017818 #22	mrps36 (ENSPNYG00000017803)	pdxp (ENSPNYG00000017790)	spef2 (ENSPNYG00000017718)	lifra (ENSPNYG00000017699)	ENSPNYG00000017685	cdo1 (ENSPNYG00000017670)	AP3S1 (ENSPNYG00000017651)	COMMD10 (ENSPNYG00000017618)	ENSPNYG00000017592	sema6a (ENSPNYG00000017551)	DMXL1 (ENSPNYG00000017313)	hsd17b4 (ENSPNYG00000017127)	prr16 (ENSPNYG00000017068)	ENSPNYG00000017050	ENSPNYG00000017022
Lyretail cichlid	MODERN SPECIES	306	gpat2 (ENSNBRG00000017707)	adra2b (ENSNBRG00000017684)	dusp2 (ENSNBRG00000017661)	MYORG (ENSNBRG00000017637)	ENSNBRG00000017622	ENSNBRG00000017608	ENSNBRG00000017602	msh3 (ENSNBRG00000017564)	rasgrf2b (ENSNBRG00000017537)	ckmt2a (ENSNBRG00000017503)	ENSNBRG00000017483	ENSNBRG00000017423	otpb (ENSNBRG00000017402) #11	scamp1 (ENSNBRG00000017376) #18	ENSNBRG00000017355 ##19	ENSNBRG00000017332 #22	mrps36 (ENSNBRG00000017305)	pdxp (ENSNBRG00000017292)	spef2 (ENSNBRG00000017118)	lifra (ENSNBRG00000017052)	ENSNBRG00000017022	cdo1 (ENSNBRG00000017002)	AP3S1 (ENSNBRG00000016685)	COMMD10 (ENSNBRG00000016535)	sema6a (ENSNBRG00000016507)	SEMA6A (ENSNBRG00000016462)	DMXL1 (ENSNBRG00000016357)	hsd17b4 (ENSNBRG00000016012)	prr16 (ENSNBRG00000015943)	ENSNBRG00000015931	ENSNBRG00000015894
Midas cichlid	MODERN SPECIES	299	ENSACIG00000005839	ENSACIG00000005823	ENSACIG00000005811	ENSACIG00000005809	ENSACIG00000005799	ENSACIG00000005791	ENSACIG00000005782	ENSACIG00000005775	msh3 (ENSACIG00000005690)	rasgrf2b (ENSACIG00000005616)	ckmt2a (ENSACIG00000005586)	ENSACIG00000005572	otpb (ENSACIG00000005567) #11	scamp1 (ENSACIG00000005504) #18	ENSACIG00000005496 ##19	ENSACIG00000005471 #22	mrps36 (ENSACIG00000005431)	pdxp (ENSACIG00000005411)	ENSACIG00000005389	ENSACIG00000005355	CEP78 (ENSACIG00000005332)	cdo1 (ENSACIG00000005324)	AP3S1 (ENSACIG00000005300)	COMMD10 (ENSACIG00000005259)	sema6a (ENSACIG00000005224)	DMXL1 (ENSACIG00000005116)	ENSACIG00000005062	prr16 (ENSACIG00000005043)	ENSACIG00000005029	ENSACIG00000005011	atxn2 (ENSACIG00000004928)
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b.j
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b.j
Spiny chromis	MODERN SPECIES	129						ENSAPOG00000002848	msh3 (ENSAPOG00000002868)	rasgrf2b (ENSAPOG00000002966)	ckmt2a (ENSAPOG00000003007)	ENSAPOG00000003022	ENSAPOG00000003053	otpb (ENSAPOG00000003078) #11	scamp1 (ENSAPOG00000003118) #18	ENSAPOG00000003137 ##19	ENSAPOG00000003169 #22	ENSAPOG00000003203 #22	mrps36 (ENSAPOG00000003231)	pdxp (ENSAPOG00000003239)	ENSAPOG00000003256	spef2 (ENSAPOG00000003339)	lifra (ENSAPOG00000003373)	ENSAPOG00000003383	cdo1 (ENSAPOG00000003408)	AP3S1 (ENSAPOG00000003452)	COMMD10 (ENSAPOG00000003465)	ENSAPOG00000003473	sema6a (ENSAPOG00000003572)	DMXL1 (ENSAPOG00000003808)	hsd17b4 (ENSAPOG00000000085)	prr16 (ENSAPOG00000003943)	ENSAPOG00000003976
Amphiprion	ANCESTRAL SPECIES	20	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b.j
Orange clownfish	MODERN SPECIES	19	adra2b (ENSAPEG00000018326)	dusp2 (ENSAPEG00000018339)	MYORG (ENSAPEG00000018350)	ENSAPEG00000018369	msh3 (ENSAPEG00000018385)	rasgrf2b (ENSAPEG00000018407)	ckmt2a (ENSAPEG00000018475)	ENSAPEG00000018504	ENSAPEG00000018513	otpb (ENSAPEG00000018531) #11	ENSAPEG00000018539	scamp1 (ENSAPEG00000018554) #18	ENSAPEG00000018591 ##19	ENSAPEG00000018648 #22	ENSAPEG00000019219 #22	ENSAPEG00000019395 #22	mrps36 (ENSAPEG00000019416)	pdxp (ENSAPEG00000019422)	ENSAPEG00000019432	spef2 (ENSAPEG00000019443)	lifra (ENSAPEG00000019494)	ENSAPEG00000019512	cdo1 (ENSAPEG00000019532)	AP3S1 (ENSAPEG00000019564)	COMMD10 (ENSAPEG00000019601)	sema6a (ENSAPEG00000019633)	DMXL1 (ENSAPEG00000019741)	hsd17b4 (ENSAPEG00000020065)	prr16 (ENSAPEG00000020172)	ENSAPEG00000020203	ENSAPEG00000020219
Bicolor damselfish	MODERN SPECIES	1167													scamp1 (ENSSPAG00000011649) #18	ENSSPAG00000011629 ##19	ENSSPAG00000011609 #22	ENSSPAG00000011578 #22	mrps36 (ENSSPAG00000011568)	pdxp (ENSSPAG00000011561)	UGT3A2 (ENSSPAG00000011547)	spef2 (ENSSPAG00000011491)	lifra (ENSSPAG00000011462)	CEP78 (ENSSPAG00000011432)	cdo1 (ENSSPAG00000011415)	AP3S1 (ENSSPAG00000011392)	COMMD10 (ENSSPAG00000011369)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Channel bull blenny	MODERN SPECIES	23	gpat2 (ENSCGOG00000005718)	adra2b (ENSCGOG00000005707)	dusp2 (ENSCGOG00000005706)	MYORG (ENSCGOG00000005697)	MYORG (ENSCGOG00000005693)	ENSCGOG00000005690	msh3 (ENSCGOG00000004680)	rasgrf2b (ENSCGOG00000002979)	ckmt2a (ENSCGOG00000002876)	ENSCGOG00000002872	ENSCGOG00000002869	otpb (ENSCGOG00000002852) #11	scamp1 (ENSCGOG00000002612) #18	ENSCGOG00000002610 ##19	ENSCGOG00000002535 #22	ENSCGOG00000002463 #22	mrps36 (ENSCGOG00000002452)	pdxp (ENSCGOG00000002454)	ENSCGOG00000002446	spef2 (ENSCGOG00000002432)	lifra (ENSCGOG00000002427)	ENSCGOG00000002424	cdo1 (ENSCGOG00000002420)	AP3S1 (ENSCGOG00000002321)	COMMD10 (ENSCGOG00000002310)	sema6a (ENSCGOG00000001398)	DMXL1 (ENSCGOG00000001043)	hsd17b4 (ENSCGOG00000000570)	prr16 (ENSCGOG00000000333)	ENSCGOG00000000330	SH2B3 (ENSCGOG00000000326)
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Lumpfish	MODERN SPECIES	24	gpat2 (ENSCLMG00005004253)	adra2b (ENSCLMG00005004258)	dusp2 (ENSCLMG00005004273)	MYORG (ENSCLMG00005004283)	ENSCLMG00005004295	ENSCLMG00005004307	msh3 (ENSCLMG00005004567)	rasgrf2b (ENSCLMG00005007737)	ckmt2a (ENSCLMG00005007740)	ENSCLMG00005007741	ENSCLMG00005007742	otpb (ENSCLMG00005007743) #11	SCAMP1 (ENSCLMG00005007744) #18	ENSCLMG00005007746 ##19	ENSCLMG00005007748 #22	ENSCLMG00005007768 #22	mrps36 (ENSCLMG00005007770)	pdxp (ENSCLMG00005007773)	ENSCLMG00005007801	ENSCLMG00005007804	ENSCLMG00005007805	ENSCLMG00005007807	ENSCLMG00005007808	cdo1 (ENSCLMG00005007809)	AP3S1 (ENSCLMG00005007810)	COMMD10 (ENSCLMG00005007817)	SEMA6A (ENSCLMG00005007820)	DMXL1 (ENSCLMG00005007828)	hsd17b4 (ENSCLMG00005007985)	prr16 (ENSCLMG00005011893)	ENSCLMG00005011899
Tetraodontidae	ANCESTRAL SPECIES	12											ENSGT00940000158782.d.a	ENSGT00950000182953.C.c	ENSGT00940000158546	ENSGT01000000217648	ENSGT00530000064873.b.g.a	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Fugu	MODERN SPECIES	13	chmp7 (ENSTRUG00000016602)	ccdc92 (ENSTRUG00000031979)	ptar1 (ENSTRUG00000029822)	mamdc2a (ENSTRUG00000016613)	zfr (ENSTRUG00000016620)	ENSTRUG00000030419	lman2lb (ENSTRUG00000016637)	ENSTRUG00000021387	tm2d2 (ENSTRUG00000016646)	KCNIP3 (ENSTRUG00000016652)	SLC23A2 (ENSTRUG00000016666)	rassf2a (ENSTRUG00000021635)	ENSTRUG00000016699	prp2 (ENSTRUG00000016701)	ENSTRUG00000021560	ENSTRUG00000025467 #22	mrps36 (ENSTRUG00000033470)	pdxp (ENSTRUG00000016711)	UGT3A2 (ENSTRUG00000016713)	spef2 (ENSTRUG00000016716)	lifra (ENSTRUG00000016730)	ENSTRUG00000016733	cdo1 (ENSTRUG00000020607)	AP3S1 (ENSTRUG00000016740)	COMMD10 (ENSTRUG00000016749)	sema6a (ENSTRUG00000016754)	DMXL1 (ENSTRUG00000016763)	hsd17b4 (ENSTRUG00000016777)	prr16 (ENSTRUG00000028138)	ENSTRUG00000016794	ENSTRUG00000027872
Tetraodon	MODERN SPECIES	3	mrpl1 (ENSTNIG00000016716)	fras1 (ENSTNIG00000016715)	anxa3a (ENSTNIG00000016714)	antxr2a (ENSTNIG00000016713)	prdm8b (ENSTNIG00000016712)	fgf5 (ENSTNIG00000016711)	bmp3 (ENSTNIG00000016710)	ENSTNIG00000001025	rasgef1ba (ENSTNIG00000016709)	ENSTNIG00000000804	ENSTNIG00000016708	SLC23A2 (ENSTNIG00000016707)	rassf2a (ENSTNIG00000016706)	ENSTNIG00000001466	ENSTNIG00000000106	ENSTNIG00000016705 #22	ENSTNIG00000016704	pdxp (ENSTNIG00000016703)	ENSTNIG00000016702	lifra (ENSTNIG00000001809)	ENSTNIG00000016701	cdo1 (ENSTNIG00000016700)	AP3S1 (ENSTNIG00000016699)	COMMD10 (ENSTNIG00000016698)	sema6a (ENSTNIG00000016697)	DMXL1 (ENSTNIG00000016696)	hsd17b4 (ENSTNIG00000016695)	prr16 (ENSTNIG00000016694)	ENSTNIG00000000777	mapkapk5 (ENSTNIG00000016693)	ostf1 (ENSTNIG00000016692)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01060000249528	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01090000260308	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01090000260308.b.b	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00970000193421.C.a.ic.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Seriola	ANCESTRAL SPECIES	72	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01090000260308.b.b.a	ENSGT01060000249528	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00940000153771.B	ENSGT01030000234564.a.a.b.b	ENSGT00390000017970.f.b
Greater amberjack	MODERN SPECIES	215	adra2b (ENSSDUG00000003296)	dusp2 (ENSSDUG00000003321)	MYORG (ENSSDUG00000003331)	msh3 (ENSSDUG00000003357)	ENSSDUG00000003421	ENSSDUG00000003426	ENSSDUG00000003435	rasgrf2b (ENSSDUG00000003447)	CKMT2 (ENSSDUG00000003516)	ENSSDUG00000003544	ENSSDUG00000003558	otpb (ENSSDUG00000003569) #11	scamp1 (ENSSDUG00000003589) #18	ENSSDUG00000003615 ##19	ENSSDUG00000003662 #22	ENSSDUG00000004062 #22	mrps36 (ENSSDUG00000004088)	pdxp (ENSSDUG00000004096)	spef2 (ENSSDUG00000004108)	lifra (ENSSDUG00000004220)	coq2 (ENSSDUG00000004275)	mboat4 (ENSSDUG00000004299)	ENSSDUG00000004326
Yellowtail amberjack	MODERN SPECIES	2450									ckmt2a (ENSSLDG00000023893)	ENSSLDG00000023884	ENSSLDG00000023879	otpb (ENSSLDG00000023870) #11	scamp1 (ENSSLDG00000023857) #18	ENSSLDG00000023851 ##19	ENSSLDG00000023770 #22	ENSSLDG00000023738 #22	mrps36 (ENSSLDG00000023729)	pdxp (ENSSLDG00000023727)	ENSSLDG00000023717	ENSSLDG00000023714	spef2 (ENSSLDG00000023671)	lifra (ENSSLDG00000023643)	coq2 (ENSSLDG00000023632)	mboat4 (ENSSLDG00000023597)	gldc (ENSSLDG00000023553)
Barramundi perch	MODERN SPECIES	9	ENSLCAG00010003900	ENSLCAG00010003903	ENSLCAG00010003905	ENSLCAG00010003908	ENSLCAG00010003911	ENSLCAG00010003914	msh3 (ENSLCAG00010003952)	RASGRF2 (ENSLCAG00010004176)	CKMT2 (ENSLCAG00010004227)	ENSLCAG00010004249	ENSLCAG00010004250	otpb (ENSLCAG00010004253) #11	scamp1 (ENSLCAG00010004260) #18	ENSLCAG00010004265 ##19	ENSLCAG00010004267 #22	ENSLCAG00010004279 #22	ENSLCAG00010004323	pdxp (ENSLCAG00010004328)	ENSLCAG00010004333	spef2 (ENSLCAG00010004339)	lifra (ENSLCAG00010004350)	ENSLCAG00010004375	cdo1 (ENSLCAG00010004401)	AP3S1 (ENSLCAG00010004424)	COMMD10 (ENSLCAG00010004452)	sema6a (ENSLCAG00010004465)	DMXL1 (ENSLCAG00010004481)	ENSLCAG00010004606	prr16 (ENSLCAG00010005106)	ENSLCAG00010005109	ENSLCAG00010005114
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01090000260308	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a.f	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Tongue sole	MODERN SPECIES	398	ENSCSEG00000018931	scarb2a (ENSCSEG00000018922)	PPEF2 (ENSCSEG00000018893)	ENSCSEG00000018882	ENSCSEG00000018853	hint2 (ENSCSEG00000018825)	mrps30 (ENSCSEG00000018816)	ENSCSEG00000018811	MALT1 (ENSCSEG00000018777)	msh3 (ENSCSEG00000018766)	rasgrf2b (ENSCSEG00000018739)	ENSCSEG00000018730	otpb (ENSCSEG00000018724) #11	scamp1 (ENSCSEG00000018720) #18	lhfpl2b (ENSCSEG00000018714) ##19	ENSCSEG00000018700 #22	mrps36 (ENSCSEG00000018682)	pdxp (ENSCSEG00000018679)	ENSCSEG00000018671	spef2 (ENSCSEG00000018648)	lifra (ENSCSEG00000018636)	ENSCSEG00000018625	cdo1 (ENSCSEG00000018610)	ENSCSEG00000018596	COMMD10 (ENSCSEG00000018586)	sema6a (ENSCSEG00000018522)	ENSCSEG00000018507	ENSCSEG00000018503	DMXL1 (ENSCSEG00000018469)	hsd17b4 (ENSCSEG00000018428)	prr16 (ENSCSEG00000018421)
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01060000249528	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01060000249528	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b	ENSGT00940000156812
Climbing perch	MODERN SPECIES	22	gpat2 (ENSATEG00000019786)	adra2b (ENSATEG00000019770)	dusp2 (ENSATEG00000026195)	ENSATEG00000027410	ENSATEG00000019724	ENSATEG00000019709	ENSATEG00000030032	msh3 (ENSATEG00000019638)	rasgrf2b (ENSATEG00000019495)	CKMT2 (ENSATEG00000019453)	ENSATEG00000019446	ENSATEG00000019435	otpb (ENSATEG00000019427) #11	ENSATEG00000019393 #18	ENSATEG00000019377 ##19	ENSATEG00000019354 #22	ENSATEG00000019347	ENSATEG00000019341	ENSATEG00000019290	ENSATEG00000019255	ENSATEG00000019228	ENSATEG00000019206	ENSATEG00000019189	COMMD10 (ENSATEG00000019168)	ENSATEG00000019102	DMXL1 (ENSATEG00000018864)	ENSATEG00000018733	ENSATEG00000018697	ENSATEG00000028142	ENSATEG00000018587	ENSATEG00000018537
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000007882	MYORG (ENSBSLG00000007866)	ENSBSLG00000007849	ENSBSLG00000007835	ENSBSLG00000007821	ENSBSLG00000007786	ENSBSLG00000007762	ENSBSLG00000007563	msh3 (ENSBSLG00000007047)	rasgrf2b (ENSBSLG00000006958)	CKMT2 (ENSBSLG00000006824)	ENSBSLG00000006771	otpb (ENSBSLG00000006744) #11	scamp1 (ENSBSLG00000006705) #18	ENSBSLG00000006694 ##19	ENSBSLG00000006641 #22	mrps36 (ENSBSLG00000006598)	pdxp (ENSBSLG00000006571)	ENSBSLG00000006545	ENSBSLG00000006531	ENSBSLG00000006439	ENSBSLG00000006397	spef2 (ENSBSLG00000005442)	lifra (ENSBSLG00000005055)	ENSBSLG00000004983	cdo1 (ENSBSLG00000004951)	AP3S1 (ENSBSLG00000004838)	COMMD10 (ENSBSLG00000004760)	sema6a (ENSBSLG00000004199)	DMXL1 (ENSBSLG00000004050)	hsd17b4 (ENSBSLG00000003850)
Zig-zag eel	MODERN SPECIES	23	adra2b (ENSMAMG00000015149)	dusp2 (ENSMAMG00000015164)	ENSMAMG00000015171	ENSMAMG00000015208	ENSMAMG00000028188	ENSMAMG00000025996	ENSMAMG00000025066	MSH3 (ENSMAMG00000015232)	ENSMAMG00000015244	CKMT2 (ENSMAMG00000015297)	ENSMAMG00000015338	ENSMAMG00000015356	otpb (ENSMAMG00000015369) #11	ENSMAMG00000015385 #18	ENSMAMG00000015438 ##19	ENSMAMG00000015452 #22	ENSMAMG00000015489	ENSMAMG00000028538	ENSMAMG00000015598	ENSMAMG00000015723	ENSMAMG00000015769	ppil2 (ENSMAMG00000015787)	ENSMAMG00000015800	mapk1 (ENSMAMG00000015823)	ENSMAMG00000015867	ENSMAMG00000015941	ENSMAMG00000015997	ENSMAMG00000016037	ENSMAMG00000016080	ENSMAMG00000016155	ENSMAMG00000016174
Tiger tail seahorse	MODERN SPECIES	67	SLC23A2 (ENSHCOG00000004401)	KCNIP3 (ENSHCOG00000004421)	pcna (ENSHCOG00000004442)	zgc:152830 (ENSHCOG00000000122)	fahd2a (ENSHCOG00000004493)	gpat2 (ENSHCOG00000004528)	adra2b (ENSHCOG00000004535)	dusp2 (ENSHCOG00000004542)	MYORG (ENSHCOG00000004570)	msh3 (ENSHCOG00000004638)	rasgrf2b (ENSHCOG00000004705)	ENSHCOG00000004796	otpb (ENSHCOG00000004816) #11	scamp1 (ENSHCOG00000004850) #18	lhfpl2b (ENSHCOG00000004860) ##19	ENSHCOG00000004874 #22	mrps36 (ENSHCOG00000004884)	pdxp (ENSHCOG00000004890)	ENSHCOG00000004911	ENSHCOG00000004955	ENSHCOG00000004970	ENSHCOG00000004988	cdo1 (ENSHCOG00000005004)	AP3S1 (ENSHCOG00000005009)	COMMD10 (ENSHCOG00000005012)	sema6a (ENSHCOG00000000134)	DMXL1 (ENSHCOG00000005176)	hsd17b4 (ENSHCOG00000005227)	prr16 (ENSHCOG00000005235)	ENSHCOG00000005244	ENSHCOG00000005251
Pinecone sodierfish	MODERN SPECIES	23	gpat2 (ENSMMDG00005003680)	adra2b (ENSMMDG00005003672)	dusp2 (ENSMMDG00005003670)	MYORG (ENSMMDG00005003664)	ENSMMDG00005003661	msh3 (ENSMMDG00005001314)	ENSMMDG00005001137	rasgrf2b (ENSMMDG00005001125)	ckmt2a (ENSMMDG00005001115)	ENSMMDG00005001112	ENSMMDG00005001106	otpb (ENSMMDG00005001102) #11	scamp1 (ENSMMDG00005001099) #18	ENSMMDG00005022335 ##19	ENSMMDG00005022334 #22	ENSMMDG00005022308 #22	mrps36 (ENSMMDG00005022303)	pdxp (ENSMMDG00005022302)	ENSMMDG00005022301	spef2 (ENSMMDG00005022298)	lifra (ENSMMDG00005022279)	CEP78 (ENSMMDG00005022273)	cdo1 (ENSMMDG00005022271)	AP3S1 (ENSMMDG00005022269)	COMMD10 (ENSMMDG00005022267)	sema6a (ENSMMDG00005022151)	DMXL1 (ENSMMDG00005022129)	hsd17b4 (ENSMMDG00005018031)	prr16 (ENSMMDG00005017926)	ENSMMDG00005017924	ENSMMDG00005017919
Acanthomorphata	ANCESTRAL SPECIES	13	ENSGT00390000004965	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Cod	MODERN SPECIES	19	zgc:152830 (ENSGMOG00000013768)	fahd2a (ENSGMOG00000013816)	gpat2 (ENSGMOG00000013847)	adra2b (ENSGMOG00000000928)	dusp2 (ENSGMOG00000000967)	ENSGMOG00000022634	ENSGMOG00000000978	ENSGMOG00000033807	MSH3 (ENSGMOG00000007132)	ENSGMOG00000007143	CKMT2 (ENSGMOG00000007164)	ENSGMOG00000007175	otpb (ENSGMOG00000025104) #11	ENSGMOG00000007187 #18	ENSGMOG00000022714 ##19	ENSGMOG00000007199 #22	ENSGMOG00000007220	ENSGMOG00000007223	ENSGMOG00000007225	ENSGMOG00000007234	ENSGMOG00000007261	ENSGMOG00000036024	ENSGMOG00000007304	ENSGMOG00000007312	COMMD10 (ENSGMOG00000007318)	ENSGMOG00000007329	DMXL1 (ENSGMOG00000007336)	ENSGMOG00000007377	ENSGMOG00000032386	ENSGMOG00000007396	ENSGMOG00000032143
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Pinecone sodierfish	MODERN SPECIES	23	FAHD2A (ENSMMDG00005003694)	gpat2 (ENSMMDG00005003680)	adra2b (ENSMMDG00005003672)	dusp2 (ENSMMDG00005003670)	MYORG (ENSMMDG00005003664)	ENSMMDG00005003661	msh3 (ENSMMDG00005001314)	ENSMMDG00005001137	rasgrf2b (ENSMMDG00005001125)	ckmt2a (ENSMMDG00005001115)	ENSMMDG00005001112	ENSMMDG00005001106	otpb (ENSMMDG00005001102) #11	scamp1 (ENSMMDG00005001099) #18	ENSMMDG00005022335 ##19	ENSMMDG00005022334 #22	ENSMMDG00005022308 #22	mrps36 (ENSMMDG00005022303)	pdxp (ENSMMDG00005022302)	ENSMMDG00005022301	spef2 (ENSMMDG00005022298)	lifra (ENSMMDG00005022279)	CEP78 (ENSMMDG00005022273)	cdo1 (ENSMMDG00005022271)	AP3S1 (ENSMMDG00005022269)	COMMD10 (ENSMMDG00005022267)	sema6a (ENSMMDG00005022151)	DMXL1 (ENSMMDG00005022129)	hsd17b4 (ENSMMDG00005018031)	prr16 (ENSMMDG00005017926)	ENSMMDG00005017924
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Ballan wrasse	MODERN SPECIES	282	FAHD2A (ENSLBEG00000014603)	gpat2 (ENSLBEG00000014519)	adra2b (ENSLBEG00000014480)	dusp2 (ENSLBEG00000014468)	MYORG (ENSLBEG00000014445)	ENSLBEG00000014426	ENSLBEG00000014417	ENSLBEG00000014404	msh3 (ENSLBEG00000014307)	rasgrf2b (ENSLBEG00000014136)	ckmt2a (ENSLBEG00000014005)	ENSLBEG00000013984	otpb (ENSLBEG00000013958) #11	scamp1 (ENSLBEG00000013925) #18	ENSLBEG00000013893 ##19	ENSLBEG00000013815 #22	ENSLBEG00000013775	pdxp (ENSLBEG00000013764)	ENSLBEG00000013739	spef2 (ENSLBEG00000013670)	lifra (ENSLBEG00000013610)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Perciformes	ANCESTRAL SPECIES	6	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Pike perch	MODERN SPECIES	2	adra2b (ENSSLUG00000016980)	dusp2 (ENSSLUG00000016989)	ENSSLUG00000016996	MYORG (ENSSLUG00000017002)	ENSSLUG00000017023	ENSSLUG00000017029	ENSSLUG00000017036	msh3 (ENSSLUG00000017157)	rasgrf2b (ENSSLUG00000019220)	ENSSLUG00000019334	ckmt2a (ENSSLUG00000019339)	ENSSLUG00000019349	otpb (ENSSLUG00000019355) #11	scamp1 (ENSSLUG00000019364) #18	ENSSLUG00000019381 ##19	ENSSLUG00000019395 #22	mrps36 (ENSSLUG00000019599)	pdxp (ENSSLUG00000019602)	ENSSLUG00000019605	spef2 (ENSSLUG00000019614)	ENSSLUG00000019629	ENSSLUG00000019635	cdo1 (ENSSLUG00000019640)	AP3S1 (ENSSLUG00000019651)	COMMD10 (ENSSLUG00000019665)	ENSSLUG00000019670	sema6a (ENSSLUG00000019700)	DMXL1 (ENSSLUG00000019890)	hsd17b4 (ENSSLUG00000020037)	ENSSLUG00000022266	prr16 (ENSSLUG00000022269)
Channel bull blenny	MODERN SPECIES	23	FAHD2A (ENSCGOG00000005759)	gpat2 (ENSCGOG00000005718)	adra2b (ENSCGOG00000005707)	dusp2 (ENSCGOG00000005706)	MYORG (ENSCGOG00000005697)	MYORG (ENSCGOG00000005693)	ENSCGOG00000005690	msh3 (ENSCGOG00000004680)	rasgrf2b (ENSCGOG00000002979)	ckmt2a (ENSCGOG00000002876)	ENSCGOG00000002872	ENSCGOG00000002869	otpb (ENSCGOG00000002852) #11	scamp1 (ENSCGOG00000002612) #18	ENSCGOG00000002610 ##19	ENSCGOG00000002535 #22	ENSCGOG00000002463 #22	mrps36 (ENSCGOG00000002452)	pdxp (ENSCGOG00000002454)	ENSCGOG00000002446	spef2 (ENSCGOG00000002432)	lifra (ENSCGOG00000002427)	ENSCGOG00000002424	cdo1 (ENSCGOG00000002420)	AP3S1 (ENSCGOG00000002321)	COMMD10 (ENSCGOG00000002310)	sema6a (ENSCGOG00000001398)	DMXL1 (ENSCGOG00000001043)	hsd17b4 (ENSCGOG00000000570)	prr16 (ENSCGOG00000000333)	ENSCGOG00000000330
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01030000235339	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Lumpfish	MODERN SPECIES	24	FAHD2A (ENSCLMG00005017509)	gpat2 (ENSCLMG00005004253)	adra2b (ENSCLMG00005004258)	dusp2 (ENSCLMG00005004273)	MYORG (ENSCLMG00005004283)	ENSCLMG00005004295	ENSCLMG00005004307	msh3 (ENSCLMG00005004567)	rasgrf2b (ENSCLMG00005007737)	ckmt2a (ENSCLMG00005007740)	ENSCLMG00005007741	ENSCLMG00005007742	otpb (ENSCLMG00005007743) #11	SCAMP1 (ENSCLMG00005007744) #18	ENSCLMG00005007746 ##19	ENSCLMG00005007748 #22	ENSCLMG00005007768 #22	mrps36 (ENSCLMG00005007770)	pdxp (ENSCLMG00005007773)	ENSCLMG00005007801	ENSCLMG00005007804	ENSCLMG00005007805	ENSCLMG00005007807	ENSCLMG00005007808	cdo1 (ENSCLMG00005007809)	AP3S1 (ENSCLMG00005007810)	COMMD10 (ENSCLMG00005007817)	SEMA6A (ENSCLMG00005007820)	DMXL1 (ENSCLMG00005007828)	hsd17b4 (ENSCLMG00005007985)	prr16 (ENSCLMG00005011893)
Stickleback	MODERN SPECIES	12	pcna (ENSGACG00000005726)	zgc:152830 (ENSGACG00000005772)	FAHD2A (ENSGACG00000005837)	gpat2 (ENSGACG00000005887)	ENSGACG00000005900	dusp2 (ENSGACG00000005902)	MYORG (ENSGACG00000005917)	ENSGACG00000005923	msh3 (ENSGACG00000005927)	rasgrf2b (ENSGACG00000005945)	ckmt2a (ENSGACG00000005959)	ENSGACG00000005997	otpb (ENSGACG00000006004) #11	scamp1 (ENSGACG00000006008) #18	lhfpl2b (ENSGACG00000006024) ##19	ENSGACG00000006029 #22	pdxp (ENSGACG00000006094)	ENSGACG00000006107	spef2 (ENSGACG00000006116)	lifra (ENSGACG00000006134)	ENSGACG00000006139	ENSGACG00000006143	cdo1 (ENSGACG00000006149)	AP3S1 (ENSGACG00000006172)	COMMD10 (ENSGACG00000006209)	sema6a (ENSGACG00000006212)	SEMA6A (ENSGACG00000006214)	DMXL1 (ENSGACG00000006220)	hsd17b4 (ENSGACG00000006242)	prr16 (ENSGACG00000006280)	ENSGACG00000006284
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01100000263927.a	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Gilthead seabream	MODERN SPECIES	19	gpat2 (ENSSAUG00010004696)	adra2b (ENSSAUG00010004701)	dusp2 (ENSSAUG00010004702)	MYORG (ENSSAUG00010004704)	ENSSAUG00010004706	ENSSAUG00010004708	ENSSAUG00010004710	ENSSAUG00010004713	msh3 (ENSSAUG00010004740)	rasgrf2b (ENSSAUG00010004967)	ckmt2a (ENSSAUG00010005054)	ENSSAUG00010005057	otpb (ENSSAUG00010005060) #11	scamp1 (ENSSAUG00010005069) #18	ENSSAUG00010005078 ##19	ENSSAUG00010005094 #22	mrps36 (ENSSAUG00010005217)	pdxp (ENSSAUG00010005219)	ENSSAUG00010005220	spef2 (ENSSAUG00010005223)	ENSSAUG00010005225	CEP78 (ENSSAUG00010005227)	cdo1 (ENSSAUG00010005231)	AP3S1 (ENSSAUG00010005237)	COMMD10 (ENSSAUG00010005240)	sema6a (ENSSAUG00010005307)	DMXL1 (ENSSAUG00010007451)	hsd17b4 (ENSSAUG00010007479)	prr16 (ENSSAUG00010008127)	ENSSAUG00010008128	ENSSAUG00010008129
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01100000263927.a	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
European seabass	MODERN SPECIES	13	gpat2 (ENSDLAG00005024535)	adra2b (ENSDLAG00005033177)	dusp2 (ENSDLAG00005032250)	ENSDLAG00005024525	ENSDLAG00005024521	ENSDLAG00005026851	ENSDLAG00005032572	ENSDLAG00005024511	MSH3 (ENSDLAG00005024340)	rasgrf2b (ENSDLAG00005024104)	CKMT2 (ENSDLAG00005024026)	ENSDLAG00005024019	otpb (ENSDLAG00005024016) #11	ENSDLAG00005031263 #18	ENSDLAG00005028977 ##19	ENSDLAG00005023874 #22	ENSDLAG00005023863	ENSDLAG00005033051	ENSDLAG00005023814	ENSDLAG00005023778	ENSDLAG00005023770	ENSDLAG00005030923	ENSDLAG00005033965	COMMD10 (ENSDLAG00005023741)	ENSDLAG00005023462	DMXL1 (ENSDLAG00005022646)	ENSDLAG00005020554	ENSDLAG00005020484	ENSDLAG00005031208	ENSDLAG00005020476	ENSDLAG00005019350
Large yellow croaker	MODERN SPECIES	2	FAHD2A (ENSLCRG00005013311)	gpat2 (ENSLCRG00005013309)	adra2b (ENSLCRG00005013308)	dusp2 (ENSLCRG00005013307)	MYORG (ENSLCRG00005013305)	ENSLCRG00005013300	ENSLCRG00005013297	msh3 (ENSLCRG00005013001)	rasgrf2b (ENSLCRG00005011501)	ckmt2a (ENSLCRG00005011463)	ENSLCRG00005011461	ENSLCRG00005011458	otpb (ENSLCRG00005011453) #11	scamp1 (ENSLCRG00005011448) #18	ENSLCRG00005011443 ##19	ENSLCRG00005011410 #22	ENSLCRG00005011386	PRADC1 (ENSLCRG00005011382)	ENSLCRG00005011282	ENSLCRG00005011280	utp15 (ENSLCRG00005011271)	ENSLCRG00005011269	ENSLCRG00005011268	ENSLCRG00005011267	ykt6 (ENSLCRG00005011264)	gck (ENSLCRG00005011103)	myl7 (ENSLCRG00005011094)	agpat9l (ENSLCRG00005011020)	ENSLCRG00005010074	fgf10b (ENSLCRG00005010062)	paip1 (ENSLCRG00005010060)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01060000249528	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Carangaria	ANCESTRAL SPECIES	9	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01090000260308	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01090000260308	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a.f	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Turbot	MODERN SPECIES	21	gpat2 (ENSSMAG00000005588)	adra2b (ENSSMAG00000005579)	dusp2 (ENSSMAG00000005569)	ENSSMAG00000032881	ENSSMAG00000005550	ENSSMAG00000005535	ENSSMAG00000030909	msh3 (ENSSMAG00000005517)	rasgrf2b (ENSSMAG00000005481)	CKMT2 (ENSSMAG00000005443)	ENSSMAG00000031758	ENSSMAG00000026806	otpb (ENSSMAG00000005414) #11	ENSSMAG00000005357 #18	ENSSMAG00000005329 ##19	ENSSMAG00000005258 #22	ENSSMAG00000005249	ENSSMAG00000025714	ENSSMAG00000005225	ENSSMAG00000005190	ENSSMAG00000005143	ENSSMAG00000005084	ENSSMAG00000005068	ENSSMAG00000005025	COMMD10 (ENSSMAG00000005004)	ENSSMAG00000004891	DMXL1 (ENSSMAG00000004792)	ENSSMAG00000004707	ENSSMAG00000004694	ENSSMAG00000004683	ENSSMAG00000004674
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01090000260308.b.b	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a.jc	ENSGT00970000193421.C.a.ic.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343
Barramundi perch	MODERN SPECIES	9	ENSLCAG00010003898	ENSLCAG00010003900	ENSLCAG00010003903	ENSLCAG00010003905	ENSLCAG00010003908	ENSLCAG00010003911	ENSLCAG00010003914	msh3 (ENSLCAG00010003952)	RASGRF2 (ENSLCAG00010004176)	CKMT2 (ENSLCAG00010004227)	ENSLCAG00010004249	ENSLCAG00010004250	otpb (ENSLCAG00010004253) #11	scamp1 (ENSLCAG00010004260) #18	ENSLCAG00010004265 ##19	ENSLCAG00010004267 #22	ENSLCAG00010004279 #22	ENSLCAG00010004323	pdxp (ENSLCAG00010004328)	ENSLCAG00010004333	spef2 (ENSLCAG00010004339)	lifra (ENSLCAG00010004350)	ENSLCAG00010004375	cdo1 (ENSLCAG00010004401)	AP3S1 (ENSLCAG00010004424)	COMMD10 (ENSLCAG00010004452)	sema6a (ENSLCAG00010004465)	DMXL1 (ENSLCAG00010004481)	ENSLCAG00010004606	prr16 (ENSLCAG00010005106)	ENSLCAG00010005109
Seriola	ANCESTRAL SPECIES	72	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01090000260308.b.b.a	ENSGT01060000249528	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00940000181535	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00940000153771.B	ENSGT01030000234564.a.a.b.b	ENSGT00390000017970.f.b
Greater amberjack	MODERN SPECIES	215	gpat2 (ENSSDUG00000003258)	adra2b (ENSSDUG00000003296)	dusp2 (ENSSDUG00000003321)	MYORG (ENSSDUG00000003331)	msh3 (ENSSDUG00000003357)	ENSSDUG00000003421	ENSSDUG00000003426	ENSSDUG00000003435	rasgrf2b (ENSSDUG00000003447)	CKMT2 (ENSSDUG00000003516)	ENSSDUG00000003544	ENSSDUG00000003558	otpb (ENSSDUG00000003569) #11	scamp1 (ENSSDUG00000003589) #18	ENSSDUG00000003615 ##19	ENSSDUG00000003662 #22	ENSSDUG00000004062 #22	mrps36 (ENSSDUG00000004088)	pdxp (ENSSDUG00000004096)	spef2 (ENSSDUG00000004108)	lifra (ENSSDUG00000004220)	coq2 (ENSSDUG00000004275)	mboat4 (ENSSDUG00000004299)	ENSSDUG00000004326
Yellowtail amberjack	MODERN SPECIES	2450										ckmt2a (ENSSLDG00000023893)	ENSSLDG00000023884	ENSSLDG00000023879	otpb (ENSSLDG00000023870) #11	scamp1 (ENSSLDG00000023857) #18	ENSSLDG00000023851 ##19	ENSSLDG00000023770 #22	ENSSLDG00000023738 #22	mrps36 (ENSSLDG00000023729)	pdxp (ENSSLDG00000023727)	ENSSLDG00000023717	ENSSLDG00000023714	spef2 (ENSSLDG00000023671)	lifra (ENSSLDG00000023643)	coq2 (ENSSLDG00000023632)	mboat4 (ENSSLDG00000023597)	gldc (ENSSLDG00000023553)
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000166311	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949.l	ENSGT01100000263860	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000166311	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263860.a.a	ENSGT01100000263860.a.b.a	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Guppy	MODERN SPECIES	461	fahd2a (ENSPREG00000012275)	gpat2 (ENSPREG00000012304)	adra2b (ENSPREG00000012347)	dusp2 (ENSPREG00000012357)	MYORG (ENSPREG00000012392)	ENSPREG00000012422	ENSPREG00000012429	ENSPREG00000012444	ENSPREG00000012458	msh3 (ENSPREG00000012499)	rasgrf2b (ENSPREG00000012616)	ckmt2a (ENSPREG00000012749)	ENSPREG00000012790	scamp1 (ENSPREG00000012821) #18	ENSPREG00000012842 ##19	ENSPREG00000012851 #22	ENSPREG00000012871 #22	mrps36 (ENSPREG00000012889)	pdxp (ENSPREG00000012937)	ENSPREG00000012976	ENSPREG00000013094	ENSPREG00000013125	cdo1 (ENSPREG00000013161)	AP3S1 (ENSPREG00000013270)	COMMD10 (ENSPREG00000013739)	sema6a (ENSPREG00000013871)	DMXL1 (ENSPREG00000014068)	hsd17b4 (ENSPREG00000014297)	prr16 (ENSPREG00000014370)	ENSPREG00000014376	ENSPREG00000014387
NAME_6	ANCESTRAL SPECIES	82								ENSGT01100000263860.a.b.a	ENSGT00550000074949.k	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565.h	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Sailfin molly	MODERN SPECIES	838										rasgrf2b (ENSPLAG00000000620)	ckmt2a (ENSPLAG00000016707)	ENSPLAG00000016690	otpb (ENSPLAG00000016667) #11	scamp1 (ENSPLAG00000016646) #18	ENSPLAG00000016593 ##19	ENSPLAG00000016587 #22	ENSPLAG00000016568 #22	mrps36 (ENSPLAG00000016546)	pdxp (ENSPLAG00000016539)	spef2 (ENSPLAG00000016505)
Platyfish	MODERN SPECIES	3	lmbrd2a (ENSXMAG00000016875)	GOLM1 (ENSXMAG00000016871)	ENSXMAG00000022545	naa35 (ENSXMAG00000016788)	agtpbp1 (ENSXMAG00000016766)	NTRK2 (ENSXMAG00000016744)	msh3 (ENSXMAG00000016720)	ENSXMAG00000025083	ENSXMAG00000022534	rasgrf2b (ENSXMAG00000016680)	ckmt2a (ENSXMAG00000016636)	ENSXMAG00000016619	otpb (ENSXMAG00000016614) #11	scamp1 (ENSXMAG00000024922) #18	ENSXMAG00000016575 ##19	ENSXMAG00000016568 #22	ENSXMAG00000022438 #22	mrps36 (ENSXMAG00000016548)	pdxp (ENSXMAG00000016546)	ENSXMAG00000016495	ENSXMAG00000016494	ENSXMAG00000016486	cdo1 (ENSXMAG00000029910)	AP3S1 (ENSXMAG00000016466)	COMMD10 (ENSXMAG00000016453)	sema6a (ENSXMAG00000021461)	DMXL1 (ENSXMAG00000016332)	hsd17b4 (ENSXMAG00000016234)	prr16 (ENSXMAG00000022156)	ENSXMAG00000016227	ENSXMAG00000020971
NAME_4	ANCESTRAL SPECIES	24	ENSGT00730000111210	ENSGT00530000063255.C	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Sheepshead minnow	MODERN SPECIES	129									rasgrf2b (ENSCVAG00000012271)	ckmt2a (ENSCVAG00000012125)	ENSCVAG00000012082	otpb (ENSCVAG00000012046) #11	ENSCVAG00000012021	scamp1 (ENSCVAG00000011999) #18	ENSCVAG00000011934 ##19	ENSCVAG00000000311 #22	ENSCVAG00000011172 #22	mrps36 (ENSCVAG00000011133)	pdxp (ENSCVAG00000011119)	ENSCVAG00000011113	ENSCVAG00000011096	cdo1 (ENSCVAG00000011082)	ENSCVAG00000011064	kirrel1b (ENSCVAG00000011050)	cadm3 (ENSCVAG00000010999)	sdhc (ENSCVAG00000010974)	atp1a2a (ENSCVAG00000010938)	mpz (ENSCVAG00000010871)	lig1 (ENSCVAG00000010811)	ENSCVAG00000010792	PIP4P1 (ENSCVAG00000010774)
Mummichog	MODERN SPECIES	2272	mns1 (ENSFHEG00000021777)	zgc:152830 (ENSFHEG00000021752)	FAHD2A (ENSFHEG00000021680)	gpat2 (ENSFHEG00000021629)	adra2b (ENSFHEG00000021618)	dusp2 (ENSFHEG00000021610)	MYORG (ENSFHEG00000021601)	ENSFHEG00000021578	ENSFHEG00000021566	msh3 (ENSFHEG00000021546)	rasgrf2b (ENSFHEG00000021480)	ckmt2a (ENSFHEG00000021390)	ENSFHEG00000021363	otpb (ENSFHEG00000021353) #11	ENSFHEG00000021333 ##19	ENSFHEG00000021313 #22	ENSFHEG00000021297 #22	mrps36 (ENSFHEG00000021291)	pdxp (ENSFHEG00000021262)	spef2 (ENSFHEG00000021227)	ENSFHEG00000000869	ENSFHEG00000020410	cdo1 (ENSFHEG00000000590)	AP3S1 (ENSFHEG00000020380)	COMMD10 (ENSFHEG00000020362)	sema6a (ENSFHEG00000020352)	sema6a (ENSFHEG00000020341)	DMXL1 (ENSFHEG00000020309)	hsd17b4 (ENSFHEG00000020106)	prr16 (ENSFHEG00000019618)	ENSFHEG00000019603
Aplocheiloidei	ANCESTRAL SPECIES	21	ENSGT00530000063255.C	ENSGT00940000166311	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01030000235339	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Mangrove rivulus	MODERN SPECIES	21	gpat2 (ENSKMAG00000002678)	adra2b (ENSKMAG00000002655)	dusp2 (ENSKMAG00000002651)	MYORG (ENSKMAG00000002622)	ENSKMAG00000002604	ENSKMAG00000002595	ENSKMAG00000002587	ENSKMAG00000002564	msh3 (ENSKMAG00000002204)	rasgrf2b (ENSKMAG00000002012)	ckmt2a (ENSKMAG00000001939)	ENSKMAG00000001924	otpb (ENSKMAG00000001897) #11	scamp1 (ENSKMAG00000001843) #18	ENSKMAG00000001828 ##19	ENSKMAG00000001742 #22	mrps36 (ENSKMAG00000001690)	pdxp (ENSKMAG00000001683)	ENSKMAG00000001637	ENSKMAG00000001568	lifra (ENSKMAG00000001550)	ENSKMAG00000001540	cdo1 (ENSKMAG00000001522)	AP3S1 (ENSKMAG00000001484)	ENSKMAG00000001471	COMMD10 (ENSKMAG00000001440)	sema6a (ENSKMAG00000001369)	DMXL1 (ENSKMAG00000001136)	hsd17b4 (ENSKMAG00000001050)	prr16 (ENSKMAG00000001042)	ENSKMAG00000001024
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263927	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000160571	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263927	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c	ENSGT01070000253853.e.a	ENSGT01070000253853.e.b.a	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Nile tilapia	MODERN SPECIES	3	FAHD2A (ENSONIG00000037466)	gpat2 (ENSONIG00000014440)	adra2b (ENSONIG00000020433)	dusp2 (ENSONIG00000035621)	MYORG (ENSONIG00000014448)	ENSONIG00000038851	ENSONIG00000037845	ENSONIG00000034144	ENSONIG00000031633	msh3 (ENSONIG00000014449)	rasgrf2b (ENSONIG00000014451)	ckmt2a (ENSONIG00000014455)	ENSONIG00000014458	scamp1 (ENSONIG00000014460) #18	LHFPL2 (ENSONIG00000031614) #11	ENSONIG00000014465 #22	mrps36 (ENSONIG00000014470)	pdxp (ENSONIG00000037485)	spef2 (ENSONIG00000014471)	lifra (ENSONIG00000014473)	CEP78 (ENSONIG00000014475)	cdo1 (ENSONIG00000014479)	AP3S1 (ENSONIG00000014481)	COMMD10 (ENSONIG00000014485)	sema6a (ENSONIG00000014486)	DMXL1 (ENSONIG00000014493)	hsd17b4 (ENSONIG00000014505)	prr16 (ENSONIG00000014516)	ENSONIG00000014517	ENSONIG00000014518	atxn2 (ENSONIG00000014521)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c	ENSGT01070000253853.e.a	ENSGT01070000253853.e.b.a	ENSGT01070000253853.e.b.b	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c.b	ENSGT01070000253853.e.a.c	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649.c.a	ENSGT01100000263649.c.b	ENSGT01070000253853.e.a.c	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443.lb	ENSGT00940000162045	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026	ENSGT00950000183191.b
P. nyererei	MODERN SPECIES	408						ENSPNYG00000018187	ENSPNYG00000018183	msh3 (ENSPNYG00000018144)	rasgrf2b (ENSPNYG00000018007)	ckmt2a (ENSPNYG00000017975)	ENSPNYG00000017962	ENSPNYG00000017906	otpb (ENSPNYG00000017891) #11	scamp1 (ENSPNYG00000017880) #18	ENSPNYG00000017864 ##19	ENSPNYG00000017850 #22	ENSPNYG00000017818 #22	mrps36 (ENSPNYG00000017803)	pdxp (ENSPNYG00000017790)	spef2 (ENSPNYG00000017718)	lifra (ENSPNYG00000017699)	ENSPNYG00000017685	cdo1 (ENSPNYG00000017670)	AP3S1 (ENSPNYG00000017651)	COMMD10 (ENSPNYG00000017618)	ENSPNYG00000017592	sema6a (ENSPNYG00000017551)	DMXL1 (ENSPNYG00000017313)	hsd17b4 (ENSPNYG00000017127)	prr16 (ENSPNYG00000017068)	ENSPNYG00000017050
Pomacentridae	ANCESTRAL SPECIES		ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT01070000253853	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Amphiprion	ANCESTRAL SPECIES	20	ENSGT00940000166311	ENSGT00520000055570.A.b	ENSGT00940000161915.a	ENSGT00940000161605	ENSGT00940000169964	ENSGT00940000161008.e	ENSGT01100000263649	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00950000182772.B.a.a.h	ENSGT00940000177396	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00940000157310.h #18	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.a.a.b.b #22	ENSGT00390000003122.a.a.b.a #22	ENSGT00390000017443	ENSGT00940000162045	ENSGT00940000161263	ENSGT00390000008160	ENSGT00940000165259.b	ENSGT00390000013287	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00390000001500	ENSGT00940000156565	ENSGT00390000000096.a	ENSGT00940000158343	ENSGT00910000144204.a	ENSGT00940000166026
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES	19	gpat2 (ENSAPEG00000018168)	adra2b (ENSAPEG00000018326)	dusp2 (ENSAPEG00000018339)	MYORG (ENSAPEG00000018350)	ENSAPEG00000018369	msh3 (ENSAPEG00000018385)	rasgrf2b (ENSAPEG00000018407)	ckmt2a (ENSAPEG00000018475)	ENSAPEG00000018504	ENSAPEG00000018513	otpb (ENSAPEG00000018531) #11	ENSAPEG00000018539	scamp1 (ENSAPEG00000018554) #18	ENSAPEG00000018591 ##19	ENSAPEG00000018648 #22	ENSAPEG00000019219 #22	ENSAPEG00000019395 #22	mrps36 (ENSAPEG00000019416)	pdxp (ENSAPEG00000019422)	ENSAPEG00000019432	spef2 (ENSAPEG00000019443)	lifra (ENSAPEG00000019494)	ENSAPEG00000019512	cdo1 (ENSAPEG00000019532)	AP3S1 (ENSAPEG00000019564)	COMMD10 (ENSAPEG00000019601)	sema6a (ENSAPEG00000019633)	DMXL1 (ENSAPEG00000019741)	hsd17b4 (ENSAPEG00000020065)	prr16 (ENSAPEG00000020172)	ENSAPEG00000020203
Orange clownfish	MODERN SPECIES	19	fahd2a (ENSAPEG00000018120)	gpat2 (ENSAPEG00000018168)	adra2b (ENSAPEG00000018326)	dusp2 (ENSAPEG00000018339)	MYORG (ENSAPEG00000018350)	ENSAPEG00000018369	msh3 (ENSAPEG00000018385)	rasgrf2b (ENSAPEG00000018407)	ckmt2a (ENSAPEG00000018475)	ENSAPEG00000018504	ENSAPEG00000018513	otpb (ENSAPEG00000018531) #11	ENSAPEG00000018539	scamp1 (ENSAPEG00000018554) #18	ENSAPEG00000018591 ##19	ENSAPEG00000018648 #22	ENSAPEG00000019219 #22	ENSAPEG00000019395 #22	mrps36 (ENSAPEG00000019416)	pdxp (ENSAPEG00000019422)	ENSAPEG00000019432	spef2 (ENSAPEG00000019443)	lifra (ENSAPEG00000019494)	ENSAPEG00000019512	cdo1 (ENSAPEG00000019532)	AP3S1 (ENSAPEG00000019564)	COMMD10 (ENSAPEG00000019601)	sema6a (ENSAPEG00000019633)	DMXL1 (ENSAPEG00000019741)	hsd17b4 (ENSAPEG00000020065)	prr16 (ENSAPEG00000020172)
Clown anemonefish	MODERN SPECIES	3622	fahd2a (ENSAOCG00000017570)	gpat2 (ENSAOCG00000017534)	adra2b (ENSAOCG00000017504)	dusp2 (ENSAOCG00000017497)	ENSAOCG00000017484	MYORG (ENSAOCG00000017467)	ENSAOCG00000017432	msh3 (ENSAOCG00000017411)	rasgrf2b (ENSAOCG00000001212)	ckmt2a (ENSAOCG00000017273)	ENSAOCG00000017236	ENSAOCG00000017223	otpb (ENSAOCG00000017211) #11	scamp1 (ENSAOCG00000017187) #18	ENSAOCG00000017155 ##19	ENSAOCG00000017128 #22	mrps36 (ENSAOCG00000017088)	pdxp (ENSAOCG00000001175)	ENSAOCG00000001172	spef2 (ENSAOCG00000017034)	lifra (ENSAOCG00000001168)	ENSAOCG00000016895	cdo1 (ENSAOCG00000016872)	AP3S1 (ENSAOCG00000016832)	COMMD10 (ENSAOCG00000016777)	sema6a (ENSAOCG00000016717)	ENSAOCG00000016621	DMXL1 (ENSAOCG00000016550)	hsd17b4 (ENSAOCG00000016306)	prr16 (ENSAOCG00000016193)	ENSAOCG00000016154
Spiny chromis	MODERN SPECIES	129							ENSAPOG00000002848	msh3 (ENSAPOG00000002868)	rasgrf2b (ENSAPOG00000002966)	ckmt2a (ENSAPOG00000003007)	ENSAPOG00000003022	ENSAPOG00000003053	otpb (ENSAPOG00000003078) #11	scamp1 (ENSAPOG00000003118) #18	ENSAPOG00000003137 ##19	ENSAPOG00000003169 #22	ENSAPOG00000003203 #22	mrps36 (ENSAPOG00000003231)	pdxp (ENSAPOG00000003239)	ENSAPOG00000003256	spef2 (ENSAPOG00000003339)	lifra (ENSAPOG00000003373)	ENSAPOG00000003383	cdo1 (ENSAPOG00000003408)	AP3S1 (ENSAPOG00000003452)	COMMD10 (ENSAPOG00000003465)	ENSAPOG00000003473	sema6a (ENSAPOG00000003572)	DMXL1 (ENSAPOG00000003808)	hsd17b4 (ENSAPOG00000000085)	prr16 (ENSAPOG00000003943)
Bicolor damselfish	MODERN SPECIES	1167														scamp1 (ENSSPAG00000011649) #18	ENSSPAG00000011629 ##19	ENSSPAG00000011609 #22	ENSSPAG00000011578 #22	mrps36 (ENSSPAG00000011568)	pdxp (ENSSPAG00000011561)	UGT3A2 (ENSSPAG00000011547)	spef2 (ENSSPAG00000011491)	lifra (ENSSPAG00000011462)	CEP78 (ENSSPAG00000011432)	cdo1 (ENSSPAG00000011415)	AP3S1 (ENSSPAG00000011392)	COMMD10 (ENSSPAG00000011369)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00390000003122.a.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.a.b #22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00390000003122.a.b #22
Atlantic herring	MODERN SPECIES	23	pip5k1bb (ENSCHAG00000026085)	fxn (ENSCHAG00000026075)	ENSCHAG00000024618	ENTREP1 (ENSCHAG00000024502)	APBA1 (ENSCHAG00000024443)	ptar1 (ENSCHAG00000024431)	CFAP95 (ENSCHAG00000024428)	mamdc2a (ENSCHAG00000024383)	MYORG (ENSCHAG00000024376)	msh3 (ENSCHAG00000024088)	rasgrf2b (ENSCHAG00000023839)	ckmt2b (ENSCHAG00000023532)	crhbp (ENSCHAG00000023516)	otpb (ENSCHAG00000023505) #11	lhfpl2a (ENSCHAG00000023502) #19	ENSCHAG00000023471 #22	ENSCHAG00000023447 #22	homer1b (ENSCHAG00000023423) #29	cdk7 (ENSCHAG00000023401)	serinc5 (ENSCHAG00000023325) #36	thbs4a (ENSCHAG00000021328) #34	mtx3 (ENSCHAG00000021271) #32	SETBP1 (ENSCHAG00000021253)	slc14a2 (ENSCHAG00000021211)	ENSCHAG00000021202	ENSCHAG00000021186	riok2 (ENSCHAG00000021077)	lix1 (ENSCHAG00000021068)	epg5 (ENSCHAG00000020254)	dnajb5 (ENSCHAG00000020223)	akr1a1a (ENSCHAG00000020098)
Denticle herring	MODERN SPECIES	2	pip5k1bb (ENSDCDG00000023395)	fxn (ENSDCDG00000023387)	tjp2b (ENSDCDG00000023358)	ENTREP1 (ENSDCDG00000023329)	APBA1 (ENSDCDG00000022754)	ptar1 (ENSDCDG00000022744)	mamdc2a (ENSDCDG00000022701)	MYORG (ENSDCDG00000022682)	msh3 (ENSDCDG00000022015)	rasgrf2b (ENSDCDG00000019736)	ckmt2b (ENSDCDG00000019545)	ENSDCDG00000019531	otpb (ENSDCDG00000019521) #11	lonp2 (ENSDCDG00000019429)	lhfpl2b (ENSDCDG00000019410) ##19	ENSDCDG00000019400 #22	homer1b (ENSDCDG00000019346) #29	tent2 (ENSDCDG00000019327)	cmya5 (ENSDCDG00000019315) #31	mtx3 (ENSDCDG00000019311) #32	thbs4a (ENSDCDG00000018205) #34	serinc5 (ENSDCDG00000018088) #36	cdk7 (ENSDCDG00000018040)	SETBP1 (ENSDCDG00000017976)	slc14a2 (ENSDCDG00000017377)	lnpep (ENSDCDG00000016984)	erap2 (ENSDCDG00000016630)	rgmb (ENSDCDG00000016577)	riok2 (ENSDCDG00000016556)	lix1 (ENSDCDG00000016542)	epg5 (ENSDCDG00000014020)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00390000003122.b #22
Clupeocephala	ANCESTRAL SPECIES	169										ENSGT00940000161008.e	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00390000001362.a	ENSGT00940000159952.a.a #11	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT01090000260661	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Euteleosteomorpha	ANCESTRAL SPECIES	137											ENSGT00940000161008.e	ENSGT00550000074949	ENSGT00940000155679.c	ENSGT00940000159952.a.a #11	ENSGT00990000203589.b.a ##19	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Acanthomorphata	ANCESTRAL SPECIES	29	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00940000174521	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00940000174521	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00940000174521	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.b.b.a	ENSGT00940000174521	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Carangaria	ANCESTRAL SPECIES	9	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Turbot	MODERN SPECIES	21	ENSSMAG00000009417	ENSSMAG00000027594	f2r (ENSSMAG00000033731)	iqgap2 (ENSSMAG00000009436)	F2RL2 (ENSSMAG00000009659)	sv2ca (ENSSMAG00000009687)	ENSSMAG00000009748	ANKDD1B (ENSSMAG00000009792)	POLK (ENSSMAG00000009824)	ENSSMAG00000009873	ENSSMAG00000009937	ENSSMAG00000009995	ENSSMAG00000010059	ENSSMAG00000010122	ENSSMAG00000010188	ENSSMAG00000010154 #22	JMY (ENSSMAG00000010198) #27	homer1b (ENSSMAG00000010206) #29	tent2 (ENSSMAG00000010222)	ENSSMAG00000010242 #31	ENSSMAG00000010257	mtx3 (ENSSMAG00000010299) #32	thbs4a (ENSSMAG00000010306) #34	serinc5 (ENSSMAG00000010386) #36	cdk7 (ENSSMAG00000010408)	ENSSMAG00000010450	slc14a2 (ENSSMAG00000010460)	ENSSMAG00000025163	lnpep (ENSSMAG00000010493)	erap2 (ENSSMAG00000010502)	ENSSMAG00000010510
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Seriola	ANCESTRAL SPECIES	7	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653.e	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Greater amberjack	MODERN SPECIES	6	ENSSDUG00000016112	ENSSDUG00000016094	f2r (ENSSDUG00000016084)	F2RL2 (ENSSDUG00000016076)	iqgap2 (ENSSDUG00000016017)	sv2ca (ENSSDUG00000015984)	ENSSDUG00000015960	ANKDD1B (ENSSDUG00000015937)	POLK (ENSSDUG00000015878)	ENSSDUG00000015802	pip5k1bb (ENSSDUG00000015733)	unc45b (ENSSDUG00000015695)	kif2a (ENSSDUG00000015538)	dimt1l (ENSSDUG00000015494)	ENSSDUG00000015478	ENSSDUG00000015446 #22	ENSSDUG00000015434 #27	JMY (ENSSDUG00000015420) #27	homer1b (ENSSDUG00000015395) #29	tent2 (ENSSDUG00000015366)	cmya5 (ENSSDUG00000015337) #31	mtx3 (ENSSDUG00000015303) #32	thbs4a (ENSSDUG00000015245) #34	serinc5 (ENSSDUG00000015201) #36	cdk7 (ENSSDUG00000015162)	SETBP1 (ENSSDUG00000015139)	slc14a2 (ENSSDUG00000015105)	lnpep (ENSSDUG00000015071)	ENSSDUG00000015048	erap2 (ENSSDUG00000014986)	ENSSDUG00000014959
Yellowtail amberjack	MODERN SPECIES	2916	ENSSLDG00000004312	ENSSLDG00000004292	f2r (ENSSLDG00000004302)	F2RL2 (ENSSLDG00000004246)	iqgap2 (ENSSLDG00000003922)	sv2ca (ENSSLDG00000003873)	ENSSLDG00000003836	ANKDD1B (ENSSLDG00000003792)	POLK (ENSSLDG00000003774)	cert1a (ENSSLDG00000003668)	pip5k1bb (ENSSLDG00000003558)	unc45b (ENSSLDG00000003454)	kif2a (ENSSLDG00000003248)	dimt1l (ENSSLDG00000003157)	ENSSLDG00000003137	ENSSLDG00000003089 #22	ENSSLDG00000003068 #27	homer1b (ENSSLDG00000003016) #29	tent2 (ENSSLDG00000002992)	cmya5 (ENSSLDG00000002915) #31	mtx3 (ENSSLDG00000002854) #32	thbs4a (ENSSLDG00000002759) #34	serinc5 (ENSSLDG00000002728) #36	cdk7 (ENSSLDG00000002649)	SETBP1 (ENSSLDG00000002628)	slc14a2 (ENSSLDG00000002449)	lnpep (ENSSLDG00000002123)	erap2 (ENSSLDG00000002038)	ENSSLDG00000001997	rgmb (ENSSLDG00000001954)	riok2 (ENSSLDG00000001926)
Barramundi perch	MODERN SPECIES	95	ENSLCAG00010027981	ENSLCAG00010027982	f2r (ENSLCAG00010027983)	iqgap2 (ENSLCAG00010028019)	F2RL2 (ENSLCAG00010028050)	sv2ca (ENSLCAG00010028051)	ENSLCAG00010028052	ANKDD1B (ENSLCAG00010028053)	POLK (ENSLCAG00010028054)	cert1a (ENSLCAG00010028055)	pip5k1bb (ENSLCAG00010028056)	unc45b (ENSLCAG00010028058)	kif2a (ENSLCAG00010028085)	dimt1l (ENSLCAG00010028109)	ENSLCAG00010028110	ENSLCAG00010028111 #22	JMY (ENSLCAG00010028112) #27	homer1b (ENSLCAG00010028113) #29	tent2 (ENSLCAG00010028114)	cmya5 (ENSLCAG00010028116) #31	mtx3 (ENSLCAG00010028117) #32	thbs4a (ENSLCAG00010028150) #34	serinc5 (ENSLCAG00010028163) #36	cdk7 (ENSLCAG00010028164)	slc14a2 (ENSLCAG00010028166)	lnpep (ENSLCAG00010028167)	erap2 (ENSLCAG00010028169)	rgmb (ENSLCAG00010028171)	riok2 (ENSLCAG00010028173)	lix1 (ENSLCAG00010028175)	ENSLCAG00010028176
Eupercaria	ANCESTRAL SPECIES	5	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	505											unc45b (ENSLBEG00000015719)	kif2a (ENSLBEG00000015452)	dimt1l (ENSLBEG00000015328)	cenph (ENSLBEG00000015297)	ENSLBEG00000015277 #22	ENSLBEG00000015239 #22	JMY (ENSLBEG00000015191) #27	homer1b (ENSLBEG00000015147) #29	tent2 (ENSLBEG00000015123)	cmya5 (ENSLBEG00000015052) #31	mtx3 (ENSLBEG00000014998) #32	thbs4a (ENSLBEG00000014918) #34	serinc5 (ENSLBEG00000014853) #36	cdk7 (ENSLBEG00000014744)	SETBP1 (ENSLBEG00000014686)	slc14a2 (ENSLBEG00000014452)	lnpep (ENSLBEG00000014176)	erap2 (ENSLBEG00000014040)	ENSLBEG00000014014	rgmb (ENSLBEG00000013993)
Ballan wrasse	MODERN SPECIES	505												unc45b (ENSLBEG00000015719)	kif2a (ENSLBEG00000015452)	dimt1l (ENSLBEG00000015328)	cenph (ENSLBEG00000015297)	ENSLBEG00000015277 #22	ENSLBEG00000015239 #22	JMY (ENSLBEG00000015191) #27	homer1b (ENSLBEG00000015147) #29	tent2 (ENSLBEG00000015123)	cmya5 (ENSLBEG00000015052) #31	mtx3 (ENSLBEG00000014998) #32	thbs4a (ENSLBEG00000014918) #34	serinc5 (ENSLBEG00000014853) #36	cdk7 (ENSLBEG00000014744)	SETBP1 (ENSLBEG00000014686)	slc14a2 (ENSLBEG00000014452)	lnpep (ENSLBEG00000014176)	erap2 (ENSLBEG00000014040)	ENSLBEG00000014014	rgmb (ENSLBEG00000013993)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Perciformes	ANCESTRAL SPECIES	6	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000177329	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00390000003255	ENSGT00390000005869.b
Stickleback	MODERN SPECIES	12	ENSGACG00000010145	ENSGACG00000010141	f2r (ENSGACG00000010138)	F2RL2 (ENSGACG00000010134)	iqgap2 (ENSGACG00000010070)	sv2ca (ENSGACG00000010037)	ENSGACG00000010031	ANKDD1B (ENSGACG00000010026)	POLK (ENSGACG00000010020)	cert1a (ENSGACG00000010013)	pip5k1bb (ENSGACG00000010008)	ENSGACG00000010004	unc45b (ENSGACG00000009985)	kif2a (ENSGACG00000009965)	dimt1l (ENSGACG00000009941)	ENSGACG00000009937 #22	JMY (ENSGACG00000009930) #27	homer1b (ENSGACG00000009905) #29	tent2 (ENSGACG00000009902)	cmya5 (ENSGACG00000009895) #31	mtx3 (ENSGACG00000009887) #32	thbs4a (ENSGACG00000009878) #34	ENSGACG00000009877	serinc5 (ENSGACG00000009870) #36	cdk7 (ENSGACG00000009848)	SETBP1 (ENSGACG00000009839)	slc14a2 (ENSGACG00000009816)	lnpep (ENSGACG00000009799)	erap2 (ENSGACG00000009777)	rgmb (ENSGACG00000009766)	riok2 (ENSGACG00000009754)
Lumpfish	MODERN SPECIES	24	hspb11 (ENSCLMG00005021339)	LZTS1 (ENSCLMG00005021340)	ENSCLMG00005021341	bco2l (ENSCLMG00005021345)	ela3l (ENSCLMG00005021390)	fam219ab (ENSCLMG00005021391)	klf9 (ENSCLMG00005021398)	TRPM3 (ENSCLMG00005021401)	cemip2 (ENSCLMG00005021409)	abhd17b (ENSCLMG00005021438)	unc45b (ENSCLMG00005021440)	ENSCLMG00005021442	kif2a (ENSCLMG00005021446)	dimt1l (ENSCLMG00005021506)	ENSCLMG00005021507	ENSCLMG00005021508 #22	JMY (ENSCLMG00005021509) #27	homer1b (ENSCLMG00005021510) #29	tent2 (ENSCLMG00005021514)	cmya5 (ENSCLMG00005021515) #31	mtx3 (ENSCLMG00005021517) #32	thbs4a (ENSCLMG00005021530) #34	serinc5 (ENSCLMG00005021532) #36	cdk7 (ENSCLMG00005021536)	SETBP1 (ENSCLMG00005021540)	slc14a2 (ENSCLMG00005021542)	lnpep (ENSCLMG00005021548)	erap2 (ENSCLMG00005021732)	rgmb (ENSCLMG00005021736)	riok2 (ENSCLMG00005021739)	lix1 (ENSCLMG00005021742)
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Channel bull blenny	MODERN SPECIES	23	f2r (ENSCGOG00000000479)	iqgap2 (ENSCGOG00000000872)	F2RL2 (ENSCGOG00000003473)	sv2ca (ENSCGOG00000003478)	ENSCGOG00000003501	ANKDD1B (ENSCGOG00000003504)	POLK (ENSCGOG00000003523)	ENSCGOG00000003825	pip5k1bb (ENSCGOG00000005218)	unc45b (ENSCGOG00000006370)	unc45b (ENSCGOG00000006411)	ENSCGOG00000006415	kif2a (ENSCGOG00000006428)	dimt1l (ENSCGOG00000007261)	ENSCGOG00000007690	ENSCGOG00000007696 #22	JMY (ENSCGOG00000007821) #27	ENSCGOG00000007831	homer1b (ENSCGOG00000007868) #29	tent2 (ENSCGOG00000008017)	mtx3 (ENSCGOG00000008033) #32	thbs4a (ENSCGOG00000008077) #34	serinc5 (ENSCGOG00000009427) #36	cdk7 (ENSCGOG00000009523)	SETBP1 (ENSCGOG00000010177)	slc14a2 (ENSCGOG00000010195)	lnpep (ENSCGOG00000010728)	erap2 (ENSCGOG00000011320)	rgmb (ENSCGOG00000012501)	ENSCGOG00000012502	riok2 (ENSCGOG00000012508)
Pike perch	MODERN SPECIES	23	zgc:110626 (ENSSLUG00000005476)	ssbp2a (ENSSLUG00000005602)	f2r (ENSSLUG00000007139)	iqgap2 (ENSSLUG00000007830)	F2RL2 (ENSSLUG00000020097)	sv2ca (ENSSLUG00000020101)	ENSSLUG00000020112	ANKDD1B (ENSSLUG00000020118)	POLK (ENSSLUG00000020136)	ENSSLUG00000020363	pip5k1bb (ENSSLUG00000020586)	unc45b (ENSSLUG00000020746)	kif2a (ENSSLUG00000021057)	dimt1l (ENSSLUG00000021807)	ENSSLUG00000021819	ENSSLUG00000021827 #22	JMY (ENSSLUG00000021857) #27	homer1b (ENSSLUG00000021870) #29	tent2 (ENSSLUG00000021925)	cmya5 (ENSSLUG00000021947) #31	mtx3 (ENSSLUG00000021953) #32	thbs4a (ENSSLUG00000021973) #34	serinc5 (ENSSLUG00000022175) #36	cdk7 (ENSSLUG00000022205)	SETBP1 (ENSSLUG00000022238)	slc14a2 (ENSSLUG00000022246)	lnpep (ENSSLUG00000022402)	erap2 (ENSSLUG00000023692)	rgmb (ENSSLUG00000023992)	ENSSLUG00000023995	riok2 (ENSSLUG00000024003)
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784.p	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010000430	ENSSAUG00010000434	f2r (ENSSAUG00010000440)	iqgap2 (ENSSAUG00010000602)	F2RL2 (ENSSAUG00010002137)	sv2ca (ENSSAUG00010002154)	ENSSAUG00010002199	ANKDD1B (ENSSAUG00010002208)	POLK (ENSSAUG00010002225)	cert1a (ENSSAUG00010002264)	pip5k1bb (ENSSAUG00010002436)	unc45b (ENSSAUG00010002480)	kif2a (ENSSAUG00010005045)	dimt1l (ENSSAUG00010008106)	ENSSAUG00010008120	ENSSAUG00010008121 #22	JMY (ENSSAUG00010008130) #27	homer1b (ENSSAUG00010008133) #29	tent2 (ENSSAUG00010008140)	cmya5 (ENSSAUG00010008164) #31	mtx3 (ENSSAUG00010008166) #32	thbs4a (ENSSAUG00010008182) #34	serinc5 (ENSSAUG00010008798) #36	cdk7 (ENSSAUG00010008799)	SETBP1 (ENSSAUG00010008803)	slc14a2 (ENSSAUG00010008810)	lnpep (ENSSAUG00010008880)	erap2 (ENSSAUG00010012402)	rgmb (ENSSAUG00010012521)	ENSSAUG00010012524	riok2 (ENSSAUG00010012525)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00950000183049.E	ENSGT00510000050125.b.a.a	ENSGT00510000050125.b.a.b	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784.p	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00950000183112.b.a.b	ENSGT00940000176950	ENSGT00390000003255
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005013514	iqgap2 (ENSLCRG00005013527)	F2RL2 (ENSLCRG00005014625)	sv2ca (ENSLCRG00005014630)	ENSLCRG00005014665	ANKDD1B (ENSLCRG00005014667)	POLK (ENSLCRG00005014672)	ENSLCRG00005014677	cert1a (ENSLCRG00005014683)	pip5k1bb (ENSLCRG00005014801)	unc45b (ENSLCRG00005014822)	kif2a (ENSLCRG00005016676)	dimt1l (ENSLCRG00005016967)	ENSLCRG00005016971	ENSLCRG00005016972 #22	ENSLCRG00005016974 #22	JMY (ENSLCRG00005016977) #27	homer1b (ENSLCRG00005016979) #29	tent2 (ENSLCRG00005016993)	cmya5 (ENSLCRG00005017004) #31	mtx3 (ENSLCRG00005017006) #32	thbs4a (ENSLCRG00005017030) #34	serinc5 (ENSLCRG00005019809) #36	cdk7 (ENSLCRG00005019811)	SETBP1 (ENSLCRG00005019822)	slc14a2 (ENSLCRG00005019830)	lnpep (ENSLCRG00005019865)	erap2 (ENSLCRG00005020953)	rgmb (ENSLCRG00005021041)	ENSLCRG00005000096	riok2 (ENSLCRG00005000109)
Large yellow croaker	MODERN SPECIES	2	f2r (ENSLCRG00005013513)	ENSLCRG00005013514	iqgap2 (ENSLCRG00005013527)	F2RL2 (ENSLCRG00005014625)	sv2ca (ENSLCRG00005014630)	ENSLCRG00005014665	ANKDD1B (ENSLCRG00005014667)	POLK (ENSLCRG00005014672)	ENSLCRG00005014677	cert1a (ENSLCRG00005014683)	pip5k1bb (ENSLCRG00005014801)	unc45b (ENSLCRG00005014822)	kif2a (ENSLCRG00005016676)	dimt1l (ENSLCRG00005016967)	ENSLCRG00005016971	ENSLCRG00005016972 #22	ENSLCRG00005016974 #22	JMY (ENSLCRG00005016977) #27	homer1b (ENSLCRG00005016979) #29	tent2 (ENSLCRG00005016993)	cmya5 (ENSLCRG00005017004) #31	mtx3 (ENSLCRG00005017006) #32	thbs4a (ENSLCRG00005017030) #34	serinc5 (ENSLCRG00005019809) #36	cdk7 (ENSLCRG00005019811)	SETBP1 (ENSLCRG00005019822)	slc14a2 (ENSLCRG00005019830)	lnpep (ENSLCRG00005019865)	erap2 (ENSLCRG00005020953)	rgmb (ENSLCRG00005021041)	ENSLCRG00005000096
European seabass	DUPLICATION
European seabass	MODERN SPECIES	13	ENSDLAG00005033612	ENSDLAG00005030190	F2RL2 (ENSDLAG00005025793)	iqgap2 (ENSDLAG00005025156)	sv2ca (ENSDLAG00005025010)	ENSDLAG00005024986	ANKDD1B (ENSDLAG00005024981)	POLK (ENSDLAG00005024966)	ENSDLAG00005024902	ENSDLAG00005024885	ENSDLAG00005024568	ENSDLAG00005024318	ENSDLAG00005024208	ENSDLAG00005024190	ENSDLAG00005024166 #22	ENSDLAG00005033007 #22	JMY (ENSDLAG00005028097) #27	homer1b (ENSDLAG00005024111) #29	tent2 (ENSDLAG00005024048)	cmya5 (ENSDLAG00005024040) #31	mtx3 (ENSDLAG00005024029) #32	thbs4a (ENSDLAG00005023415) #34	serinc5 (ENSDLAG00005023386) #36	cdk7 (ENSDLAG00005023361)	ENSDLAG00005032086	ENSDLAG00005023354	slc14a2 (ENSDLAG00005023309)	lnpep (ENSDLAG00005022417)	erap2 (ENSDLAG00005022293)	rgmb (ENSDLAG00005032609)	riok2 (ENSDLAG00005022267)
European seabass	MODERN SPECIES	13	ENSDLAG00005025829	ENSDLAG00005033612	ENSDLAG00005030190	F2RL2 (ENSDLAG00005025793)	iqgap2 (ENSDLAG00005025156)	sv2ca (ENSDLAG00005025010)	ENSDLAG00005024986	ANKDD1B (ENSDLAG00005024981)	POLK (ENSDLAG00005024966)	ENSDLAG00005024902	ENSDLAG00005024885	ENSDLAG00005024568	ENSDLAG00005024318	ENSDLAG00005024208	ENSDLAG00005024190	ENSDLAG00005024166 #22	ENSDLAG00005033007 #22	JMY (ENSDLAG00005028097) #27	homer1b (ENSDLAG00005024111) #29	tent2 (ENSDLAG00005024048)	cmya5 (ENSDLAG00005024040) #31	mtx3 (ENSDLAG00005024029) #32	thbs4a (ENSDLAG00005023415) #34	serinc5 (ENSDLAG00005023386) #36	cdk7 (ENSDLAG00005023361)	ENSDLAG00005032086	ENSDLAG00005023354	slc14a2 (ENSDLAG00005023309)	lnpep (ENSDLAG00005022417)	erap2 (ENSDLAG00005022293)	rgmb (ENSDLAG00005032609)
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00940000174521	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00970000197576	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000177329	ENSGT00940000157654.e.a	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Pomacentridae	DUPLICATION
Pomacentridae	ANCESTRAL SPECIES		ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b
Bicolor damselfish	MODERN SPECIES	470	ENSSPAG00000021067	ENSSPAG00000021081	f2r (ENSSPAG00000021094)	iqgap2 (ENSSPAG00000021112)	F2RL2 (ENSSPAG00000021188)	sv2ca (ENSSPAG00000021204)	ENSSPAG00000021228	ANKDD1B (ENSSPAG00000021243)	POLK (ENSSPAG00000021274)	cert1a (ENSSPAG00000021295)	pip5k1bb (ENSSPAG00000021338)	unc45b (ENSSPAG00000021369)	kif2a (ENSSPAG00000021416)	dimt1l (ENSSPAG00000021538)	ENSSPAG00000021568	ENSSPAG00000021584 #22	ENSSPAG00000021636 #22	JMY (ENSSPAG00000021666) #27	homer1b (ENSSPAG00000021698) #29	tent2 (ENSSPAG00000021728)	cmya5 (ENSSPAG00000021744) #31	mtx3 (ENSSPAG00000021771) #32	thbs4a (ENSSPAG00000021799) #34	serinc5 (ENSSPAG00000021846) #36	cdk7 (ENSSPAG00000021864)	SETBP1 (ENSSPAG00000021880)	slc14a2 (ENSSPAG00000021891)	lnpep (ENSSPAG00000021907)	erap2 (ENSSPAG00000021925)	rgmb (ENSSPAG00000021941)	ENSSPAG00000021945
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b
Amphiprion	ANCESTRAL SPECIES	10	ENSGT00510000050125.b.a.b	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b
Orange clownfish	MODERN SPECIES	19	ssbp2a (ENSAPEG00000018983)	ENSAPEG00000019036	ENSAPEG00000019067	iqgap2 (ENSAPEG00000019086)	F2RL2 (ENSAPEG00000019240)	sv2ca (ENSAPEG00000019260)	ENSAPEG00000019305	ANKDD1B (ENSAPEG00000019318)	POLK (ENSAPEG00000019364)	cert1a (ENSAPEG00000019380)	pip5k1bb (ENSAPEG00000019447)	unc45b (ENSAPEG00000019457)	kif2a (ENSAPEG00000019529)	dimt1l (ENSAPEG00000019673)	ENSAPEG00000019721	ENSAPEG00000019739 #22	ENSAPEG00000019784 #22	JMY (ENSAPEG00000019822) #27	homer1b (ENSAPEG00000019847) #29	tent2 (ENSAPEG00000019886)	cmya5 (ENSAPEG00000019935) #31	mtx3 (ENSAPEG00000019952) #32	thbs4a (ENSAPEG00000020060) #34	serinc5 (ENSAPEG00000020544) #36	cdk7 (ENSAPEG00000020556)	ENSAPEG00000020617	slc14a2 (ENSAPEG00000020626)	lnpep (ENSAPEG00000020692)	erap2 (ENSAPEG00000020768)	ENSAPEG00000020813	rgmb (ENSAPEG00000020832)
Clown anemonefish	MODERN SPECIES	2065														dimt1l (ENSAOCG00000020481)	ENSAOCG00000020430	ENSAOCG00000020415 #22	ENSAOCG00000020376 #22	ENSAOCG00000020343	JMY (ENSAOCG00000020324) #27	homer1b (ENSAOCG00000002343) #29	tent2 (ENSAOCG00000020247)	cmya5 (ENSAOCG00000020199) #31	mtx3 (ENSAOCG00000020078) #32	thbs4a (ENSAOCG00000020026) #34	serinc5 (ENSAOCG00000019942) #36	cdk7 (ENSAOCG00000019923)
Spiny chromis	MODERN SPECIES	3438																ENSAPOG00000013293 #22
Pomacentridae	ANCESTRAL SPECIES		ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Bicolor damselfish	MODERN SPECIES	470	ENSSPAG00000021081	f2r (ENSSPAG00000021094)	iqgap2 (ENSSPAG00000021112)	F2RL2 (ENSSPAG00000021188)	sv2ca (ENSSPAG00000021204)	ENSSPAG00000021228	ANKDD1B (ENSSPAG00000021243)	POLK (ENSSPAG00000021274)	cert1a (ENSSPAG00000021295)	pip5k1bb (ENSSPAG00000021338)	unc45b (ENSSPAG00000021369)	kif2a (ENSSPAG00000021416)	dimt1l (ENSSPAG00000021538)	ENSSPAG00000021568	ENSSPAG00000021584 #22	ENSSPAG00000021636 #22	JMY (ENSSPAG00000021666) #27	homer1b (ENSSPAG00000021698) #29	tent2 (ENSSPAG00000021728)	cmya5 (ENSSPAG00000021744) #31	mtx3 (ENSSPAG00000021771) #32	thbs4a (ENSSPAG00000021799) #34	serinc5 (ENSSPAG00000021846) #36	cdk7 (ENSSPAG00000021864)	SETBP1 (ENSSPAG00000021880)	slc14a2 (ENSSPAG00000021891)	lnpep (ENSSPAG00000021907)	erap2 (ENSSPAG00000021925)	rgmb (ENSSPAG00000021941)	ENSSPAG00000021945
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Amphiprion	ANCESTRAL SPECIES	10	ENSGT00510000050125.b.b	ENSGT01050000244840.A.a.b.e	ENSGT01050000244840.A.b.b.a	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.e	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.a	ENSGT00940000156639.c	ENSGT00940000157654.f	ENSGT00940000155570.s	ENSGT00950000183142.a.a	ENSGT00390000009578	ENSGT00390000003122.b.g #22	ENSGT00390000003122.b.h #22	ENSGT00510000046704.b.a.d #27	ENSGT00940000156354.o #29	ENSGT00940000156640	ENSGT00940000159696 #31	ENSGT00950000182919.B.b #32	ENSGT00940000155227.b #34	ENSGT01030000234623.a.b.a #36	ENSGT00940000155179	ENSGT00940000158784	ENSGT00390000018729.a.e	ENSGT00940000157902	ENSGT00940000162653	ENSGT00940000176950	ENSGT00950000183112.b.a.b	ENSGT00390000003255
Clown anemonefish	MODERN SPECIES	2065													dimt1l (ENSAOCG00000020481)	ENSAOCG00000020430	ENSAOCG00000020415 #22	ENSAOCG00000020376 #22	ENSAOCG00000020343	JMY (ENSAOCG00000020324) #27	homer1b (ENSAOCG00000002343) #29	tent2 (ENSAOCG00000020247)	cmya5 (ENSAOCG00000020199) #31	mtx3 (ENSAOCG00000020078) #32	thbs4a (ENSAOCG00000020026) #34	serinc5 (ENSAOCG00000019942) #36	cdk7 (ENSAOCG00000019923)
Orange clownfish	MODERN SPECIES	19	ENSAPEG00000019036	ENSAPEG00000019067	iqgap2 (ENSAPEG00000019086)	F2RL2 (ENSAPEG00000019240)	sv2ca (ENSAPEG00000019260)	ENSAPEG00000019305	ANKDD1B (ENSAPEG00000019318)	POLK (ENSAPEG00000019364)	cert1a (ENSAPEG00000019380)	pip5k1bb (ENSAPEG00000019447)	unc45b (ENSAPEG00000019457)	kif2a (ENSAPEG00000019529)	dimt1l (ENSAPEG00000019673)	ENSAPEG00000019721	ENSAPEG00000019739 #22	ENSAPEG00000019784 #22	JMY (ENSAPEG00000019822) #27	homer1b (ENSAPEG00000019847) #29	tent2 (ENSAPEG00000019886)	cmya5 (ENSAPEG00000019935) #31	mtx3 (ENSAPEG00000019952) #32	thbs4a (ENSAPEG00000020060) #34	serinc5 (ENSAPEG00000020544) #36	cdk7 (ENSAPEG00000020556)	ENSAPEG00000020617	slc14a2 (ENSAPEG00000020626)	lnpep (ENSAPEG00000020692)	erap2 (ENSAPEG00000020768)	ENSAPEG00000020813	rgmb (ENSAPEG00000020832)	riok2 (ENSAPEG00000020853)
Spiny chromis	MODERN SPECIES	1092												unc45b (ENSAPOG00000021441)	kif2a (ENSAPOG00000021591)	dimt1l (ENSAPOG00000021641)	ENSAPOG00000000614	ENSAPOG00000021716 #22	JMY (ENSAPOG00000021744) #27	homer1b (ENSAPOG00000021804) #29	tent2 (ENSAPOG00000021854)	cmya5 (ENSAPOG00000021943) #31	mtx3 (ENSAPOG00000021983) #32	thbs4a (ENSAPOG00000022044) #34	ENSAPOG00000022078 ##36
Pinecone sodierfish	MODERN SPECIES	23	f2r (ENSMMDG00005017448)	iqgap2 (ENSMMDG00005017661)	F2RL2 (ENSMMDG00005023840)	sv2ca (ENSMMDG00005023842)	ENSMMDG00005023845	ANKDD1B (ENSMMDG00005023846)	POLK (ENSMMDG00005023849)	cert1a (ENSMMDG00005023857)	pip5k1bb (ENSMMDG00005004289)	unc45b (ENSMMDG00005006070)	ENSMMDG00005006078	kif2a (ENSMMDG00005006130)	ENSMMDG00005008429	dimt1l (ENSMMDG00005008433)	ENSMMDG00005008436	ENSMMDG00005008444 #22	ENSMMDG00005008455 #27	homer1b (ENSMMDG00005008474) #29	tent2 (ENSMMDG00005008556)	mtx3 (ENSMMDG00005008718) #32	thbs4a (ENSMMDG00005008723) #34	serinc5 (ENSMMDG00005008731) #36	cdk7 (ENSMMDG00005008742)	SETBP1 (ENSMMDG00005008766)	slc14a2 (ENSMMDG00005008767)	lnpep (ENSMMDG00005008811)	erap2 (ENSMMDG00005010527)	rgmb (ENSMMDG00005010686)	riok2 (ENSMMDG00005010709)	lix1 (ENSMMDG00005010727)	epg5 (ENSMMDG00005010760)
Cod	MODERN SPECIES	19	ENSGMOG00000036026	ssbp2a (ENSGMOG00000011029)	f2r (ENSGMOG00000011006)	F2RL2 (ENSGMOG00000032744)	iqgap2 (ENSGMOG00000010974)	sv2ca (ENSGMOG00000010961)	ENSGMOG00000010940	ANKDD1B (ENSGMOG00000010928)	POLK (ENSGMOG00000010897)	ENSGMOG00000010878	ENSGMOG00000010866	ENSGMOG00000010844	ENSGMOG00000010819	ENSGMOG00000010801	ENSGMOG00000010781	ENSGMOG00000010765 #22	JMY (ENSGMOG00000010750) #27	HOMER1 (ENSGMOG00000029081) #29	tent2 (ENSGMOG00000010732)	cmya5 (ENSGMOG00000010684) #31	mtx3 (ENSGMOG00000010669) #32	thbs4a (ENSGMOG00000010650) #34	serinc5 (ENSGMOG00000010632) #36	cdk7 (ENSGMOG00000010620)	ENSGMOG00000026056	add2 (ENSGMOG00000008103)	figla (ENSGMOG00000033185)	hk2 (ENSGMOG00000008089)	ENSGMOG00000022911	tet3 (ENSGMOG00000026685)	ap3m2 (ENSGMOG00000008074)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00390000003122.b #22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00390000003122.b #22
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	23	FIBCD1 (ENSCHAG00000022590)	traf1 (ENSCHAG00000022601)	phf19 (ENSCHAG00000022635)	DAB2IP (ENSCHAG00000022839)	endog (ENSCHAG00000024269)	ENSCHAG00000024275	ENSCHAG00000024283	ENSCHAG00000024302	ENSCHAG00000024309	ENSCHAG00000024318	ENSCHAG00000024340	ENSCHAG00000024346	ENSCHAG00000024354	ENSCHAG00000024361	ENSCHAG00000024365	ENSCHAG00000024372 #22	hpdb (ENSCHAG00000024377)	ENSCHAG00000000218	aplnra (ENSCHAG00000000237)	ENSCHAG00000000242	ENSCHAG00000000275	sf3a1 (ENSCHAG00000000721)	slc7a4 (ENSCHAG00000001397)	ENSCHAG00000001458	ENSCHAG00000001594	ENSCHAG00000002306	dgcr6 (ENSCHAG00000002312)	ENSCHAG00000002369	DTX1 (ENSCHAG00000003678)	cmklr1 (ENSCHAG00000003854)	pi4kab (ENSCHAG00000003980)
Atlantic herring	MODERN SPECIES	23	fxn (ENSCHAG00000026075)	ENSCHAG00000024618	ENTREP1 (ENSCHAG00000024502)	APBA1 (ENSCHAG00000024443)	ptar1 (ENSCHAG00000024431)	CFAP95 (ENSCHAG00000024428)	mamdc2a (ENSCHAG00000024383)	MYORG (ENSCHAG00000024376)	msh3 (ENSCHAG00000024088)	rasgrf2b (ENSCHAG00000023839)	ckmt2b (ENSCHAG00000023532)	crhbp (ENSCHAG00000023516)	otpb (ENSCHAG00000023505) #11	lhfpl2a (ENSCHAG00000023502) #19	ENSCHAG00000023471 #22	ENSCHAG00000023447 #22	homer1b (ENSCHAG00000023423) #29	cdk7 (ENSCHAG00000023401)	serinc5 (ENSCHAG00000023325) #36	thbs4a (ENSCHAG00000021328) #34	mtx3 (ENSCHAG00000021271) #32	SETBP1 (ENSCHAG00000021253)	slc14a2 (ENSCHAG00000021211)	ENSCHAG00000021202	ENSCHAG00000021186	riok2 (ENSCHAG00000021077)	lix1 (ENSCHAG00000021068)	epg5 (ENSCHAG00000020254)	dnajb5 (ENSCHAG00000020223)	akr1a1a (ENSCHAG00000020098)	vcp (ENSCHAG00000019611)
Spotted gar	MODERN SPECIES	658	F2RL1 (ENSLOCG00000005593)	ch25hl2 (ENSLOCG00000017529)	ENSLOCG00000005613	s100z (ENSLOCG00000005654)	crhbp (ENSLOCG00000005670)	aggf1 (ENSLOCG00000005688) #7	PDE8B (ENSLOCG00000005705) #9	wdr41 (ENSLOCG00000005746) #10	otpa (ENSLOCG00000005761) #11	tbca (ENSLOCG00000005775) #14	AP3B1 (ENSLOCG00000005786) #17	scamp1 (ENSLOCG00000005808) #18	lhfpl2a (ENSLOCG00000005821) #19	ARSB (ENSLOCG00000005844)	DMGDH (ENSLOCG00000005858) #21	bhmt (ENSLOCG00000005877) #22	JMY (ENSLOCG00000005899) #27	homer1b (ENSLOCG00000005916) #29	tent2 (ENSLOCG00000005954)	cmya5 (ENSLOCG00000005987) #31	mtx3 (ENSLOCG00000006008) #32	thbs4b (ENSLOCG00000006036) #34	serinc5 (ENSLOCG00000006068) #36	cdk7 (ENSLOCG00000006117)	ENSLOCG00000006135	SETBP1 (ENSLOCG00000006153)	ENSLOCG00000017530	slc14a2 (ENSLOCG00000006284)	lnpep (ENSLOCG00000006318)	ERAP2 (ENSLOCG00000006336)	erap2 (ENSLOCG00000006368)
Reedfish	MODERN SPECIES	15	f2rl1.1 (ENSECRG00000004864)	ch25hl2 (ENSECRG00000004872)	ENSECRG00000004877	s100z (ENSECRG00000004884)	crhbp (ENSECRG00000004895)	aggf1 (ENSECRG00000004908) #7	PDE8B (ENSECRG00000004936) #9	wdr41 (ENSECRG00000004971) #10	otpa (ENSECRG00000004985) #11	tbca (ENSECRG00000004988) #14	AP3B1 (ENSECRG00000005004) #17	scamp1 (ENSECRG00000005024) #18	lhfpl2a (ENSECRG00000005036) #19	ARSB (ENSECRG00000005042)	DMGDH (ENSECRG00000005056) #21	bhmt (ENSECRG00000005095) #22	JMY (ENSECRG00000005242) #27	homer1b (ENSECRG00000005272) #29	tent2 (ENSECRG00000005304)	mtx3 (ENSECRG00000005326) #32	thbs4b (ENSECRG00000005410) #34	ENSECRG00000006108 #36	serinc5 (ENSECRG00000006119) #36	ENSECRG00000006131	ENSECRG00000006139	cdk7 (ENSECRG00000006149)	SETBP1 (ENSECRG00000006155)	ENSECRG00000006169	slc14a2 (ENSECRG00000006195)	slc14a2 (ENSECRG00000006289)	lnpep (ENSECRG00000006753)
Elephant shark	MODERN SPECIES	1507									AP3B1 (ENSCMIG00000018473) #17	scamp1 (ENSCMIG00000018564) #18	lhfpl2a (ENSCMIG00000018582) #19	ARSB (ENSCMIG00000018586)	ENSCMIG00000018589	DMGDH (ENSCMIG00000018618) #21	grcc10 (ENSCMIG00000018643)	bhmt (ENSCMIG00000018646) #22	JMY (ENSCMIG00000018652) #27	homer1b (ENSCMIG00000018658) #29	tent2 (ENSCMIG00000018678)	ENSCMIG00000018687 #31	mtx3 (ENSCMIG00000018689) #32	thbs4b (ENSCMIG00000018713) #34	serinc5 (ENSCMIG00000018761) #36	cdk7 (ENSCMIG00000018767)	mrps36 (ENSCMIG00000018776)	ENSCMIG00000018778	ccnb1 (ENSCMIG00000018781)	ccnb1 (ENSCMIG00000018786)	slc30a5 (ENSCMIG00000018802)	pik3r1 (ENSCMIG00000018842)	MAST4 (ENSCMIG00000018917)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000003122 #22
Hagfish	MODERN SPECIES	673											ENSEBUG00000012555	ENSEBUG00000012830	ENSEBUG00000004902	ENSEBUG00000012544	SIN3A (ENSEBUG00000016859)	bhmt (ENSEBUG00000004240) #22
Lamprey	MODERN SPECIES	1946																ENSPMAG00000004502 #22	stoml2 (ENSPMAG00000004503)	pi4kb (ENSPMAG00000004526)