Vertebrata ANCESTRAL SPECIES ENSGT00940000155167 #22 Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 224 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 Euteleostomi ANCESTRAL SPECIES 72 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Sarcopterygii ANCESTRAL SPECIES 96 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Amniota ANCESTRAL SPECIES 3 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Sauria ANCESTRAL SPECIES ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 Toxicofera ANCESTRAL SPECIES 8 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Elapidae ANCESTRAL SPECIES 8 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Elapidae_a ANCESTRAL SPECIES 44 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667.a #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A.c #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00990000213308 #32 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 Acanthophiinae ANCESTRAL SPECIES 15 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667.a #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A.c #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000164318 #33 ENSGT00940000166312.b.b #34 ENSGT00940000155701.A #35 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a Eastern brown snake MODERN SPECIES 22 TBC1D31 (ENSPTXG00000004153) #7 DERL1 (ENSPTXG00000004152) #8 ZHX2 (ENSPTXG00000004151) #9 HAS2 (ENSPTXG00000004150) #10 SNTB1 (ENSPTXG00000004149) #11 MTBP (ENSPTXG00000004147) #12 MRPL13 (ENSPTXG00000004145) #13 COL14A1 (ENSPTXG00000000581) #14 DEPTOR (ENSPTXG00000001708) #15 DSCC1 (ENSPTXG00000001687) #16 TAF2 (ENSPTXG00000001683) #17 ENPP2 (ENSPTXG00000001674) #18 CCN3 (ENSPTXG00000001670) #19 MAL2 (ENSPTXG00000001669) #20 COLEC10 (ENSPTXG00000001668) #21 TNFRSF11B (ENSPTXG00000001666) #22 SAMD12 (ENSPTXG00000001665) #23 ENSPTXG00000001664 #24 EXT1 (ENSPTXG00000001649) #25 MED30 (ENSPTXG00000001648) #26 ENSPTXG00000001647 #27 RAD21 (ENSPTXG00000001645) #28 UTP23 (ENSPTXG00000001644) #29 EIF3H (ENSPTXG00000001642) #30 TRPS1 (ENSPTXG00000001641) #31 ENSPTXG00000001637 #32 ENSPTXG00000001634 #33 ENSPTXG00000001631 #34 ENSPTXG00000001628 #35 ENSPTXG00000001625 #36 KCNV1 (ENSPTXG00000001622) #37 Mainland tiger snake MODERN SPECIES 5 HAS2 (ENSNSUG00000011187) #10 SNTB1 (ENSNSUG00000011190) #11 MTBP (ENSNSUG00000011193) #12 MRPL13 (ENSNSUG00000011194) #13 COL14A1 (ENSNSUG00000011195) #14 ENSNSUG00000011206 #15 DSCC1 (ENSNSUG00000011209) #16 TAF2 (ENSNSUG00000011231) #17 ENPP2 (ENSNSUG00000011236) #18 CCN3 (ENSNSUG00000012267) #19 MAL2 (ENSNSUG00000012268) #20 COLEC10 (ENSNSUG00000012269) #21 ENSNSUG00000012270 TNFRSF11B (ENSNSUG00000012271) #22 SAMD12 (ENSNSUG00000012273) #23 ENSNSUG00000012274 #24 EXT1 (ENSNSUG00000012277) #25 MED30 (ENSNSUG00000012279) #26 ENSNSUG00000012280 #27 RAD21 (ENSNSUG00000012281) #28 UTP23 (ENSNSUG00000012282) #29 EIF3H (ENSNSUG00000012283) #30 TRPS1 (ENSNSUG00000012285) #31 ENSNSUG00000012290 #33 ENSNSUG00000012292 #35 ENSNSUG00000012296 #36 ENSNSUG00000012299 #36 KCNV1 (ENSNSUG00000012302) #37 SYBU (ENSNSUG00000012303) Blue-lipped sea krait MODERN SPECIES 1253 TNFRSF11B (ENSLLTG00000012389) #22 Indian cobra MODERN SPECIES 2 DERL1 (ENSNNAG00000017747) #8 ZHX2 (ENSNNAG00000017744) #9 HAS2 (ENSNNAG00000017742) #10 SNTB1 (ENSNNAG00000017733) #11 MTBP (ENSNNAG00000017726) #12 MRPL13 (ENSNNAG00000017721) #13 COL14A1 (ENSNNAG00000017354) #14 DEPTOR (ENSNNAG00000017296) #15 DSCC1 (ENSNNAG00000017285) #16 TAF2 (ENSNNAG00000016720) #17 ENPP2 (ENSNNAG00000016591) #18 CCN3 (ENSNNAG00000016578) #19 MAL2 (ENSNNAG00000016575) #20 COLEC10 (ENSNNAG00000016568) #21 ENSNNAG00000016565 TNFRSF11B (ENSNNAG00000016552) #22 SAMD12 (ENSNNAG00000016540) #23 ENSNNAG00000016534 #24 EXT1 (ENSNNAG00000016519) #25 MED30 (ENSNNAG00000016515) #26 RAD21 (ENSNNAG00000016498) #28 UTP23 (ENSNNAG00000016488) #29 EIF3H (ENSNNAG00000016471) #30 TRPS1 (ENSNNAG00000016454) #31 ENSNNAG00000016442 ENSNNAG00000016432 CSMD3 (ENSNNAG00000008744) #36 KCNV1 (ENSNNAG00000008201) #37 SYBU (ENSNNAG00000008171) EBAG9 (ENSNNAG00000008106) ENSNNAG00000008040 Lizard MODERN SPECIES 883 ENSACAG00000024213 #10 SNTB1 (ENSACAG00000009289) #11 MTBP (ENSACAG00000009271) #12 MRPL13 (ENSACAG00000009255) #13 ENSACAG00000009044 #14 DEPTOR (ENSACAG00000009022) #15 DSCC1 (ENSACAG00000009002) #16 TAF2 (ENSACAG00000008878) #17 ENPP2 (ENSACAG00000008571) #18 CCN3 (ENSACAG00000008505) #19 MAL2 (ENSACAG00000037275) #20 COLEC10 (ENSACAG00000036693) #21 TNFRSF11B (ENSACAG00000008445) #22 SAMD12 (ENSACAG00000008442) #23 ENSACAG00000037085 ENSACAG00000045314 #24 EXT1 (ENSACAG00000008346) #25 Laterata ANCESTRAL SPECIES 5 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT01060000249299 #27 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 Common wall lizard MODERN SPECIES 15 ZHX2 (ENSPMRG00000018142) #9 ENSPMRG00000018148 HAS2 (ENSPMRG00000018156) #10 SNTB1 (ENSPMRG00000018165) #11 MTBP (ENSPMRG00000018177) #12 MRPL13 (ENSPMRG00000018208) #13 COL14A1 (ENSPMRG00000018442) #14 ENSPMRG00000019380 DEPTOR (ENSPMRG00000019395) #15 DSCC1 (ENSPMRG00000019424) #16 TAF2 (ENSPMRG00000019449) #17 ENPP2 (ENSPMRG00000019517) #18 CCN3 (ENSPMRG00000019577) #19 MAL2 (ENSPMRG00000019583) #20 COLEC10 (ENSPMRG00000019595) #21 TNFRSF11B (ENSPMRG00000019605) #22 SAMD12 (ENSPMRG00000019144) #23 EXT1 (ENSPMRG00000019170) #25 MED30 (ENSPMRG00000019184) #26 SLC30A8 (ENSPMRG00000019199) ENSPMRG00000019256 #27 RAD21 (ENSPMRG00000019260) #28 ENSPMRG00000019272 #29 ENSPMRG00000019280 EIF3H (ENSPMRG00000019283) #30 TRPS1 (ENSPMRG00000019293) #31 CSMD3 (ENSPMRG00000019324) #36 KCNV1 (ENSPMRG00000019559) #37 SYBU (ENSPMRG00000019572) EBAG9 (ENSPMRG00000019596) ENY2 (ENSPMRG00000019611) Argentine black and white tegu MODERN SPECIES 13 TBC1D31 (ENSSMRG00000021467) #7 DERL1 (ENSSMRG00000021466) #8 ZHX2 (ENSSMRG00000021465) #9 HAS2 (ENSSMRG00000021463) #10 SNTB1 (ENSSMRG00000021461) #11 MTBP (ENSSMRG00000021460) #12 MRPL13 (ENSSMRG00000021459) #13 COL14A1 (ENSSMRG00000021458) #14 DEPTOR (ENSSMRG00000021457) #15 ENSSMRG00000021456 #16 TAF2 (ENSSMRG00000021455) #17 ENPP2 (ENSSMRG00000021454) #18 CCN3 (ENSSMRG00000021453) #19 MAL2 (ENSSMRG00000021452) #20 COLEC10 (ENSSMRG00000021451) #21 TNFRSF11B (ENSSMRG00000021450) #22 SAMD12 (ENSSMRG00000021449) #23 ENSSMRG00000021448 #24 EXT1 (ENSSMRG00000021445) #25 MED30 (ENSSMRG00000021444) #26 SLC30A8 (ENSSMRG00000021426) ENSSMRG00000021425 #27 RAD21 (ENSSMRG00000021424) #28 UTP23 (ENSSMRG00000021423) #29 EIF3H (ENSSMRG00000021422) #30 TRPS1 (ENSSMRG00000021420) #31 ENSSMRG00000021419 #32 CSMD3 (ENSSMRG00000021412) #36 KCNV1 (ENSSMRG00000021409) #37 SYBU (ENSSMRG00000021408) EBAG9 (ENSSMRG00000021407) tuatara MODERN SPECIES 441 CCN3 (ENSSPUG00000007391) #19 ENSSPUG00000007401 #20 COLEC10 (ENSSPUG00000007412) #21 TNFRSF11B (ENSSPUG00000007425) #22 ENSSPUG00000007434 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Archosauria ANCESTRAL SPECIES ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Aves ANCESTRAL SPECIES 9 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Neognathae ANCESTRAL SPECIES ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Neognathae_c ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Golden eagle MODERN SPECIES 20 DERL1 (ENSACCG00020001854) #8 ZHX2 (ENSACCG00020001865) #9 HAS2 (ENSACCG00020001877) #10 SNTB1 (ENSACCG00020001889) #11 MTBP (ENSACCG00020001912) #12 MRPL13 (ENSACCG00020001937) #13 COL14A1 (ENSACCG00020001981) #14 ENSACCG00020002025 DEPTOR (ENSACCG00020002043) #15 DSCC1 (ENSACCG00020002068) #16 TAF2 (ENSACCG00020002105) #17 ENPP2 (ENSACCG00020002176) #18 CCN3 (ENSACCG00020002208) #19 MAL2 (ENSACCG00020002229) #20 COLEC10 (ENSACCG00020002237) #21 TNFRSF11B (ENSACCG00020002257) #22 SAMD12 (ENSACCG00020002288) #23 EXT1 (ENSACCG00020002320) #25 MED30 (ENSACCG00020002336) #26 SLC30A8 (ENSACCG00020002375) RAD21 (ENSACCG00020002426) #28 UTP23 (ENSACCG00020002438) #29 EIF3H (ENSACCG00020002456) #30 TRPS1 (ENSACCG00020002486) #31 ENSACCG00020002512 #36 ENSACCG00020002545 #36 ENSACCG00020002570 #36 ENSACCG00020002586 #36 KCNV1 (ENSACCG00020002616) #37 SYBU (ENSACCG00020002627) EBAG9 (ENSACCG00020002640) Kakapo MODERN SPECIES DERL1 (ENSSHBG00005007049) #8 ZHX2 (ENSSHBG00005007081) #9 HAS2 (ENSSHBG00005007093) #10 SNTB1 (ENSSHBG00005007105) #11 ENSSHBG00005007123 MTBP (ENSSHBG00005007149) #12 MRPL13 (ENSSHBG00005007181) #13 COL14A1 (ENSSHBG00005007883) #14 DEPTOR (ENSSHBG00005017391) #15 DSCC1 (ENSSHBG00005017393) #16 TAF2 (ENSSHBG00005017401) #17 ENPP2 (ENSSHBG00005017421) #18 CCN3 (ENSSHBG00005017425) #19 MAL2 (ENSSHBG00005017426) #20 COLEC10 (ENSSHBG00005017428) #21 TNFRSF11B (ENSSHBG00005017429) #22 SAMD12 (ENSSHBG00005017431) #23 EXT1 (ENSSHBG00005017434) #25 MED30 (ENSSHBG00005017437) #26 SLC30A8 (ENSSHBG00005017438) RAD21 (ENSSHBG00005017439) #28 UTP23 (ENSSHBG00005017441) #29 EIF3H (ENSSHBG00005017442) #30 TRPS1 (ENSSHBG00005017444) #31 CSMD3 (ENSSHBG00005017584) #36 KCNV1 (ENSSHBG00005017993) #37 SYBU (ENSSHBG00005017998) EBAG9 (ENSSHBG00005018002) ENY2 (ENSSHBG00005018005) NUDCD1 (ENSSHBG00005018007) TRHR (ENSSHBG00005018013) Passeriformes ANCESTRAL SPECIES ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Great tit MODERN SPECIES 11 TBC1D31 (ENSPMJG00000011268) #7 DERL1 (ENSPMJG00000011267) #8 ZHX2 (ENSPMJG00000011266) #9 HAS2 (ENSPMJG00000011263) #10 SNTB1 (ENSPMJG00000011259) #11 MTBP (ENSPMJG00000011256) #12 MRPL13 (ENSPMJG00000011255) #13 COL14A1 (ENSPMJG00000011254) #14 DEPTOR (ENSPMJG00000011253) #15 DSCC1 (ENSPMJG00000011252) #16 TAF2 (ENSPMJG00000011251) #17 ENPP2 (ENSPMJG00000011250) #18 CCN3 (ENSPMJG00000011248) #19 MAL2 (ENSPMJG00000011247) #20 COLEC10 (ENSPMJG00000011246) #21 TNFRSF11B (ENSPMJG00000011245) #22 SAMD12 (ENSPMJG00000011242) #23 EXT1 (ENSPMJG00000011143) #25 MED30 (ENSPMJG00000011131) #26 SLC30A8 (ENSPMJG00000011127) RAD21 (ENSPMJG00000011110) #28 UTP23 (ENSPMJG00000011108) #29 EIF3H (ENSPMJG00000011103) #30 TRPS1 (ENSPMJG00000011066) #31 CSMD3 (ENSPMJG00000010983) #36 KCNV1 (ENSPMJG00000010913) #37 SYBU (ENSPMJG00000010909) EBAG9 (ENSPMJG00000010904) ENY2 (ENSPMJG00000010897) NUDCD1 (ENSPMJG00000010894) TRHR (ENSPMJG00000010849) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Passeroidea ANCESTRAL SPECIES 2 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Common canary MODERN SPECIES ENSSCAG00000007256 DERL1 (ENSSCAG00000007247) #8 ZHX2 (ENSSCAG00000007235) #9 HAS2 (ENSSCAG00000007205) #10 SNTB1 (ENSSCAG00000007099) #11 MTBP (ENSSCAG00000007075) #12 MRPL13 (ENSSCAG00000007067) #13 COL14A1 (ENSSCAG00000007044) #14 DEPTOR (ENSSCAG00000007032) #15 DSCC1 (ENSSCAG00000007024) #16 TAF2 (ENSSCAG00000007001) #17 ENPP2 (ENSSCAG00000006961) #18 CCN3 (ENSSCAG00000006932) #19 MAL2 (ENSSCAG00000006916) #20 COLEC10 (ENSSCAG00000006912) #21 TNFRSF11B (ENSSCAG00000006906) #22 SAMD12 (ENSSCAG00000006901) #23 EXT1 (ENSSCAG00000006832) #25 MED30 (ENSSCAG00000006754) #26 SLC30A8 (ENSSCAG00000006593) RAD21 (ENSSCAG00000006560) #28 UTP23 (ENSSCAG00000006504) #29 EIF3H (ENSSCAG00000006473) #30 TRPS1 (ENSSCAG00000006431) #31 ENSSCAG00000006410 #36 ENSSCAG00000006402 #34 ENSSCAG00000006385 #36 ENSSCAG00000006377 #36 ENSSCAG00000006371 #36 KCNV1 (ENSSCAG00000006354) #37 SYBU (ENSSCAG00000006323) Zebra finch MODERN SPECIES 12 TBC1D31 (ENSTGUG00000012420) #7 DERL1 (ENSTGUG00000027312) #8 ZHX2 (ENSTGUG00000012413) #9 HAS2 (ENSTGUG00000012411) #10 SNTB1 (ENSTGUG00000012405) #11 MTBP (ENSTGUG00000012401) #12 MRPL13 (ENSTGUG00000012400) #13 COL14A1 (ENSTGUG00000012390) #14 DEPTOR (ENSTGUG00000028876) #15 DSCC1 (ENSTGUG00000012379) #16 TAF2 (ENSTGUG00000012376) #17 ENPP2 (ENSTGUG00000012352) #18 CCN3 (ENSTGUG00000012349) #19 MAL2 (ENSTGUG00000028155) #20 COLEC10 (ENSTGUG00000019400) #21 TNFRSF11B (ENSTGUG00000012341) #22 ENSTGUG00000024839 SAMD12 (ENSTGUG00000020404) #23 EXT1 (ENSTGUG00000012328) #25 MED30 (ENSTGUG00000012326) #26 SLC30A8 (ENSTGUG00000012324) RAD21 (ENSTGUG00000012319) #28 UTP23 (ENSTGUG00000019640) #29 EIF3H (ENSTGUG00000029531) #30 TRPS1 (ENSTGUG00000012298) #31 CSMD3 (ENSTGUG00000012272) #36 ENSTGUG00000027711 KCNV1 (ENSTGUG00000012266) #37 SYBU (ENSTGUG00000012263) EBAG9 (ENSTGUG00000012252) ENY2 (ENSTGUG00000026246) Medium ground finch MODERN SPECIES 24 TBC1D31 (ENSGFOG00000009072) #7 DERL1 (ENSGFOG00000009060) #8 ZHX2 (ENSGFOG00000009056) #9 HAS2 (ENSGFOG00000009053) #10 SNTB1 (ENSGFOG00000009047) #11 MTBP (ENSGFOG00000009030) #12 MRPL13 (ENSGFOG00000009023) #13 COL14A1 (ENSGFOG00000006186) #14 DEPTOR (ENSGFOG00000006099) #15 DSCC1 (ENSGFOG00000006083) #16 TAF2 (ENSGFOG00000006063) #17 ENPP2 (ENSGFOG00000006026) #18 ENSGFOG00000006018 #19 MAL2 (ENSGFOG00000006011) #20 COLEC10 (ENSGFOG00000006007) #21 TNFRSF11B (ENSGFOG00000006001) #22 SAMD12 (ENSGFOG00000013441) #23 EXT1 (ENSGFOG00000013424) #25 MED30 (ENSGFOG00000013421) #26 SLC30A8 (ENSGFOG00000013393) RAD21 (ENSGFOG00000013390) #28 UTP23 (ENSGFOG00000013389) #29 EIF3H (ENSGFOG00000013387) #30 ENSGFOG00000013385 TRPS1 (ENSGFOG00000013382) #31 CSMD3 (ENSGFOG00000013377) #36 Flycatcher MODERN SPECIES 11 DERL1 (ENSFALG00000002439) #8 ZHX2 (ENSFALG00000014375) #9 HAS2 (ENSFALG00000023275) #10 SNTB1 (ENSFALG00000002431) #11 MTBP (ENSFALG00000002426) #12 MRPL13 (ENSFALG00000002422) #13 COL14A1 (ENSFALG00000002405) #14 DEPTOR (ENSFALG00000002385) #15 DSCC1 (ENSFALG00000002371) #16 TAF2 (ENSFALG00000002356) #17 ENPP2 (ENSFALG00000002338) #18 ENSFALG00000024646 ENSFALG00000002328 #19 MAL2 (ENSFALG00000025444) #20 COLEC10 (ENSFALG00000002321) #21 TNFRSF11B (ENSFALG00000023816) #22 SAMD12 (ENSFALG00000023400) #23 EXT1 (ENSFALG00000002316) #25 MED30 (ENSFALG00000002314) #26 SLC30A8 (ENSFALG00000002307) RAD21 (ENSFALG00000002300) #28 UTP23 (ENSFALG00000002299) #29 EIF3H (ENSFALG00000002297) #30 TRPS1 (ENSFALG00000002296) #31 CSMD3 (ENSFALG00000002275) #36 KCNV1 (ENSFALG00000002264) #37 SYBU (ENSFALG00000006139) EBAG9 (ENSFALG00000022897) ENY2 (ENSFALG00000006123) NUDCD1 (ENSFALG00000006119) TRHR (ENSFALG00000006115) Galloanserae ANCESTRAL SPECIES ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Anatidae ANCESTRAL SPECIES 3 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Pink-footed goose MODERN SPECIES 16 TBC1D31 (ENSABRG00000010073) #7 DERL1 (ENSABRG00000010125) #8 ZHX2 (ENSABRG00000010138) #9 HAS2 (ENSABRG00000010154) #10 SNTB1 (ENSABRG00000010173) #11 MTBP (ENSABRG00000010183) #12 MRPL13 (ENSABRG00000010204) #13 COL14A1 (ENSABRG00000010379) #14 DEPTOR (ENSABRG00000012480) #15 DSCC1 (ENSABRG00000012562) #16 TAF2 (ENSABRG00000012639) #17 ENPP2 (ENSABRG00000013594) #18 CCN3 (ENSABRG00000013614) #19 MAL2 (ENSABRG00000013618) #20 COLEC10 (ENSABRG00000013622) #21 TNFRSF11B (ENSABRG00000013638) #22 SAMD12 (ENSABRG00000013658) #23 EXT1 (ENSABRG00000013681) #25 MED30 (ENSABRG00000013696) #26 SLC30A8 (ENSABRG00000013730) RAD21 (ENSABRG00000014139) #28 UTP23 (ENSABRG00000014148) #29 EIF3H (ENSABRG00000014153) #30 TRPS1 (ENSABRG00000014177) #31 CSMD3 (ENSABRG00000014193) #36 ENSABRG00000014231 ENSABRG00000014239 KCNV1 (ENSABRG00000014257) #37 SYBU (ENSABRG00000014269) EBAG9 (ENSABRG00000014271) ENY2 (ENSABRG00000014276) Duck MODERN SPECIES 10 FAM83A (ENSAPLG00000010979) TBC1D31 (ENSAPLG00000010985) #7 DERL1 (ENSAPLG00000026389) #8 HAS2 (ENSAPLG00000006075) #10 SNTB1 (ENSAPLG00000005833) #11 MTBP (ENSAPLG00000005442) #12 MRPL13 (ENSAPLG00000019065) #13 COL14A1 (ENSAPLG00000008273) #14 DEPTOR (ENSAPLG00000008162) #15 DSCC1 (ENSAPLG00000008065) #16 TAF2 (ENSAPLG00000007663) #17 ENPP2 (ENSAPLG00000006897) #18 CCN3 (ENSAPLG00000006728) #19 MAL2 (ENSAPLG00000018801) #20 COLEC10 (ENSAPLG00000019811) #21 TNFRSF11B (ENSAPLG00000009749) #22 SAMD12 (ENSAPLG00000009933) #23 EXT1 (ENSAPLG00000009944) #25 MED30 (ENSAPLG00000014888) #26 SLC30A8 (ENSAPLG00000014913) RIPK2 (ENSAPLG00000006833) ENSAPLG00000006772 OSGIN2 (ENSAPLG00000006564) NBN (ENSAPLG00000006440) DECR1 (ENSAPLG00000006309) CALB1 (ENSAPLG00000005891) TMEM64 (ENSAPLG00000012726) NECAB1 (ENSAPLG00000012515) PIP4P2 (ENSAPLG00000012413) OTUD6B (ENSAPLG00000012136) SLC26A7 (ENSAPLG00000011993) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000164318 #33 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Turkey MODERN SPECIES 22 TBC1D31 (ENSMGAG00000012590) #7 DERL1 (ENSMGAG00000012586) #8 ZHX2 (ENSMGAG00000015867) #9 HAS2 (ENSMGAG00000012580) #10 SNTB1 (ENSMGAG00000012578) #11 MTBP (ENSMGAG00000012572) #12 MRPL13 (ENSMGAG00000012570) #13 COL14A1 (ENSMGAG00000012567) #14 DEPTOR (ENSMGAG00000012556) #15 DSCC1 (ENSMGAG00000012551) #16 TAF2 (ENSMGAG00000012541) #17 ENPP2 (ENSMGAG00000012517) #18 CCN3 (ENSMGAG00000012516) #19 MAL2 (ENSMGAG00000018976) #20 COLEC10 (ENSMGAG00000012507) #21 TNFRSF11B (ENSMGAG00000012502) #22 SAMD12 (ENSMGAG00000012500) #23 EXT1 (ENSMGAG00000012494) #25 MED30 (ENSMGAG00000012493) #26 SLC30A8 (ENSMGAG00000012488) ENSMGAG00000022496 RAD21 (ENSMGAG00000012475) #28 UTP23 (ENSMGAG00000021793) #29 EIF3H (ENSMGAG00000012467) #30 TRPS1 (ENSMGAG00000012464) #31 ENSMGAG00000017639 #33 ENSMGAG00000012361 ENSMGAG00000018712 ENSMGAG00000012366 ENSMGAG00000012369 LRP12 (ENSMGAG00000012372) Chicken MODERN SPECIES 11 TBC1D31 (ENSGALG00010009634) #7 DERL1 (ENSGALG00010009612) #8 ZHX2 (ENSGALG00010009601) #9 HAS2 (ENSGALG00010009506) #10 SNTB1 (ENSGALG00010009490) #11 MTBP (ENSGALG00010009479) #12 MRPL13 (ENSGALG00010009463) #13 COL14A1 (ENSGALG00010009416) #14 DEPTOR (ENSGALG00010009387) #15 DSCC1 (ENSGALG00010009368) #16 TAF2 (ENSGALG00010009363) #17 ENPP2 (ENSGALG00010009344) #18 CCN3 (ENSGALG00010009284) #19 MAL2 (ENSGALG00010009273) #20 COLEC10 (ENSGALG00010009263) #21 TNFRSF11B (ENSGALG00010009219) #22 SAMD12 (ENSGALG00010009163) #23 EXT1 (ENSGALG00010009091) #25 MED30 (ENSGALG00010009083) #26 SLC30A8 (ENSGALG00010009052) RAD21 (ENSGALG00010009038) #28 UTP23 (ENSGALG00010009025) #29 EIF3H (ENSGALG00010007984) #30 TRPS1 (ENSGALG00010008623) #31 ENSGALG00010009801 CSMD3 (ENSGALG00010008473) #36 ENSGALG00010008068 KCNV1 (ENSGALG00010008063) #37 SYBU (ENSGALG00010008438) EBAG9 (ENSGALG00010008433) ENY2 (ENSGALG00010008004) Japanese quail MODERN SPECIES 11 TBC1D31 (ENSCJPG00005005701) #7 DERL1 (ENSCJPG00005005699) #8 ZHX2 (ENSCJPG00005005698) #9 HAS2 (ENSCJPG00005005631) #10 SNTB1 (ENSCJPG00005005608) #11 MTBP (ENSCJPG00005005568) #12 MRPL13 (ENSCJPG00005005563) #13 COL14A1 (ENSCJPG00005005501) #14 DEPTOR (ENSCJPG00005005492) #15 DSCC1 (ENSCJPG00005005449) #16 TAF2 (ENSCJPG00005005440) #17 ENPP2 (ENSCJPG00005005395) #18 CCN3 (ENSCJPG00005005391) #19 MAL2 (ENSCJPG00005005387) #20 COLEC10 (ENSCJPG00005005383) #21 TNFRSF11B (ENSCJPG00005005378) #22 SAMD12 (ENSCJPG00005005368) #23 EXT1 (ENSCJPG00005005336) #25 MED30 (ENSCJPG00005005330) #26 SLC30A8 (ENSCJPG00005005326) RAD21 (ENSCJPG00005005297) #28 UTP23 (ENSCJPG00005005296) #29 EIF3H (ENSCJPG00005005287) #30 TRPS1 (ENSCJPG00005005268) #31 CSMD3 (ENSCJPG00005005227) #36 KCNV1 (ENSCJPG00005005180) #37 SYBU (ENSCJPG00005005178) EBAG9 (ENSCJPG00005005155) ENSCJPG00005005150 NUDCD1 (ENSCJPG00005005146) TRHR (ENSCJPG00005005145) African ostrich MODERN SPECIES 201 TBC1D31 (ENSSCUG00000001629) #7 DERL1 (ENSSCUG00000001633) #8 ZHX2 (ENSSCUG00000001635) #9 HAS2 (ENSSCUG00000001637) #10 SNTB1 (ENSSCUG00000001644) #11 MTBP (ENSSCUG00000001649) #12 MRPL13 (ENSSCUG00000001654) #13 COL14A1 (ENSSCUG00000001660) #14 DEPTOR (ENSSCUG00000001672) #15 DSCC1 (ENSSCUG00000001681) #16 TAF2 (ENSSCUG00000001697) #17 ENPP2 (ENSSCUG00000001710) #18 CCN3 (ENSSCUG00000001714) #19 MAL2 (ENSSCUG00000001715) #20 COLEC10 (ENSSCUG00000001717) #21 TNFRSF11B (ENSSCUG00000001720) #22 ENSSCUG00000001721 Australian saltwater crocodile MODERN SPECIES TBC1D31 (ENSCPRG00005008728) #7 DERL1 (ENSCPRG00005008725) #8 ZHX2 (ENSCPRG00005008723) #9 HAS2 (ENSCPRG00005008703) #10 SNTB1 (ENSCPRG00005008688) #11 MTBP (ENSCPRG00005008616) #12 MRPL13 (ENSCPRG00005008591) #13 COL14A1 (ENSCPRG00005007882) #14 DEPTOR (ENSCPRG00005007749) #15 DSCC1 (ENSCPRG00005007746) #16 TAF2 (ENSCPRG00005007727) #17 ENPP2 (ENSCPRG00005007674) #18 CCN3 (ENSCPRG00005007670) #19 MAL2 (ENSCPRG00005007650) #20 COLEC10 (ENSCPRG00005007648) #21 TNFRSF11B (ENSCPRG00005007645) #22 SAMD12 (ENSCPRG00005007632) #23 EXT1 (ENSCPRG00005007604) #25 MED30 (ENSCPRG00005007497) #26 SLC30A8 (ENSCPRG00005007473) RAD21 (ENSCPRG00005007439) #28 UTP23 (ENSCPRG00005007401) #29 EIF3H (ENSCPRG00005007395) #30 TRPS1 (ENSCPRG00005007350) #31 ENSCPRG00005007291 #36 ENSCPRG00005007268 #36 ENSCPRG00005007206 #36 ENSCPRG00005007189 #36 ENSCPRG00005007184 KCNV1 (ENSCPRG00005007154) #37 SYBU (ENSCPRG00005007115) Cryptodira ANCESTRAL SPECIES 22 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Testudinoidea ANCESTRAL SPECIES 16 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Emydidae ANCESTRAL SPECIES 15 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 Three-toed box turtle MODERN SPECIES 24 TBC1D31 (ENSTMTG00000013246) #7 DERL1 (ENSTMTG00000013223) #8 ZHX2 (ENSTMTG00000013210) #9 HAS2 (ENSTMTG00000013200) #10 SNTB1 (ENSTMTG00000013194) #11 MTBP (ENSTMTG00000012851) #12 MRPL13 (ENSTMTG00000012804) #13 COL14A1 (ENSTMTG00000012701) #14 DEPTOR (ENSTMTG00000012669) #15 DSCC1 (ENSTMTG00000012646) #16 TAF2 (ENSTMTG00000012591) #17 ENPP2 (ENSTMTG00000011540) #18 CCN3 (ENSTMTG00000011467) #19 MAL2 (ENSTMTG00000005322) #20 COLEC10 (ENSTMTG00000005311) #21 TNFRSF11B (ENSTMTG00000005294) #22 SAMD12 (ENSTMTG00000005280) #23 ENSTMTG00000005266 #24 EXT1 (ENSTMTG00000005215) #25 MED30 (ENSTMTG00000005191) #26 SLC30A8 (ENSTMTG00000003718) RAD21 (ENSTMTG00000003563) #28 UTP23 (ENSTMTG00000003549) #29 EIF3H (ENSTMTG00000003529) #30 TRPS1 (ENSTMTG00000003435) #31 ENSTMTG00000003392 ENSTMTG00000003363 ENSTMTG00000003318 ENSTMTG00000003297 #36 ENSTMTG00000003277 #34 ENSTMTG00000003257 #36 painted turtle MODERN SPECIES 773 SNTB1 (ENSCPBG00000015255) #11 MTBP (ENSCPBG00000015262) #12 MRPL13 (ENSCPBG00000015289) #13 COL14A1 (ENSCPBG00000015298) #14 DEPTOR (ENSCPBG00000015331) #15 ENSCPBG00000015335 DSCC1 (ENSCPBG00000015337) #16 TAF2 (ENSCPBG00000015342) #17 ENPP2 (ENSCPBG00000015362) #18 ENSCPBG00000015377 CCN3 (ENSCPBG00000015378) #19 ENSCPBG00000015382 MAL2 (ENSCPBG00000015384) #20 COLEC10 (ENSCPBG00000015387) #21 TNFRSF11B (ENSCPBG00000015390) #22 SLC10A2 (ENSCPBG00000015396) ENSCPBG00000015404 BIVM (ENSCPBG00000015409) POGLUT2 (ENSCPBG00000015411) ENSCPBG00000015413 METTL21C (ENSCPBG00000015415) TPP2 (ENSCPBG00000015419) FGF14 (ENSCPBG00000015436) ITGBL1 (ENSCPBG00000015437) Testudinidae ANCESTRAL SPECIES 27 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00940000153195.A.z.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515.w #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00390000011748 ENSGT00390000007776 Abingdon island giant tortoise MODERN SPECIES 533 HAS2 (ENSCABG00000004715) #10 ENSCABG00000004713 SNTB1 (ENSCABG00000004712) #11 MTBP (ENSCABG00000004707) #12 ENSCABG00000004705 #13 COL14A1 (ENSCABG00000004697) #14 DEPTOR (ENSCABG00000004458) #15 DSCC1 (ENSCABG00000004452) #16 TAF2 (ENSCABG00000004448) #17 ENSCABG00000004445 ENPP2 (ENSCABG00000004296) #18 CCN3 (ENSCABG00000004292) #19 MAL2 (ENSCABG00000004289) #20 COLEC10 (ENSCABG00000004287) #21 TNFRSF11B (ENSCABG00000004285) #22 Goode s thornscrub tortoise MODERN SPECIES 11 ZHX2 (ENSGEVG00005015762) #9 HAS2 (ENSGEVG00005015714) #10 ENSGEVG00005015684 SNTB1 (ENSGEVG00005015590) #11 MTBP (ENSGEVG00005015538) #12 ENSGEVG00005015504 #13 COL14A1 (ENSGEVG00005015258) #14 DEPTOR (ENSGEVG00005015134) #15 DSCC1 (ENSGEVG00005015100) #16 TAF2 (ENSGEVG00005015050) #17 ENSGEVG00005014967 #18 ENSGEVG00005014858 #18 ENSGEVG00005014813 #19 MAL2 (ENSGEVG00005014766) #20 COLEC10 (ENSGEVG00005014709) #21 TNFRSF11B (ENSGEVG00005014658) #22 SAMD12 (ENSGEVG00005014576) #23 ENSGEVG00005014559 #24 MED30 (ENSGEVG00005014534) #26 SLC30A8 (ENSGEVG00005013234) RAD21 (ENSGEVG00005012905) #28 UTP23 (ENSGEVG00005012878) #29 EIF3H (ENSGEVG00005012847) #30 TRPS1 (ENSGEVG00005012725) #31 ENSGEVG00005012679 ENSGEVG00005012614 #36 ENSGEVG00005012561 #36 ENSGEVG00005012437 #36 ENSGEVG00005012342 #36 ENSGEVG00005012224 #36 KCNV1 (ENSGEVG00005012166) #37 Chinese turtle MODERN SPECIES 1659 TAF2 (ENSPSIG00000014115) #17 ENPP2 (ENSPSIG00000015853) #18 CCN3 (ENSPSIG00000008920) #19 MAL2 (ENSPSIG00000010225) #20 COLEC10 (ENSPSIG00000010714) #21 TNFRSF11B (ENSPSIG00000010889) #22 SAMD12 (ENSPSIG00000011163) #23 ENSPSIG00000001755 #25 ENSPSIG00000011243 #25 MED30 (ENSPSIG00000011471) #26 ENSPSIG00000011586 ENSPSIG00000011700 ENSPSIG00000001759 SLC30A8 (ENSPSIG00000011913) RAD21 (ENSPSIG00000012631) #28 UTP23 (ENSPSIG00000013132) #29 EIF3H (ENSPSIG00000013356) #30 ENSPSIG00000013900 TRPS1 (ENSPSIG00000014014) #31 Mammalia ANCESTRAL SPECIES 3 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Theria ANCESTRAL SPECIES 7 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Marsupialia ANCESTRAL SPECIES 1 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000155238.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01030000235077 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00390000007870.b.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000155238.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT01030000235077 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Diprotodontia ANCESTRAL SPECIES 36 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00390000007870.b.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000155238.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Diprotodontia_a ANCESTRAL SPECIES 35 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00390000007870.b.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000155238.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.v ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 ENSGT01100000263484.B.b.b Common wonbat MODERN SPECIES 651 ZHX2 (ENSVURG00010016623) #9 HAS2 (ENSVURG00010016650) #10 ENSVURG00010016659 SNTB1 (ENSVURG00010016668) #11 MTBP (ENSVURG00010016679) #12 MRPL13 (ENSVURG00010016720) #13 COL14A1 (ENSVURG00010016740) #14 DEPTOR (ENSVURG00010016809) #15 DSCC1 (ENSVURG00010016837) #16 TAF2 (ENSVURG00010016853) #17 ENPP2 (ENSVURG00010016906) #18 CCN3 (ENSVURG00010016997) #19 MAL2 (ENSVURG00010017007) #20 ENSVURG00010017012 COLEC10 (ENSVURG00010017061) #21 TNFRSF11B (ENSVURG00010017074) #22 SAMD12 (ENSVURG00010017096) #23 EXT1 (ENSVURG00010017119) #25 MED30 (ENSVURG00010017131) #26 RAD21 (ENSVURG00010017148) #28 UTP23 (ENSVURG00010017165) #29 EIF3H (ENSVURG00010017172) #30 TRPS1 (ENSVURG00010017201) #31 ENSVURG00010017248 ENSVURG00010017260 CSMD3 (ENSVURG00010017335) #36 ENSVURG00010017491 ENSVURG00010017514 KCNV1 (ENSVURG00010017526) #37 ENSVURG00010017536 SYBU (ENSVURG00010017544) koala MODERN SPECIES 274 ENPP2 (ENSPCIG00000011446) #18 CCN3 (ENSPCIG00000011444) #19 MAL2 (ENSPCIG00000035914) #20 ENSPCIG00000011434 COLEC10 (ENSPCIG00000011429) #21 TNFRSF11B (ENSPCIG00000011425) #22 ENSPCIG00000021126 SAMD12 (ENSPCIG00000037313) #23 EXT1 (ENSPCIG00000003769) #25 MED30 (ENSPCIG00000028188) #26 Wallaby MODERN SPECIES 7084 TNFRSF11B (ENSMEUG00000016739) #22 Tasmanian devil MODERN SPECIES ZHX2 (ENSSHAG00000011260) #9 HAS2 (ENSSHAG00000008736) #10 ENSSHAG00000003459 SNTB1 (ENSSHAG00000021252) #11 MTBP (ENSSHAG00000018541) #12 MRPL13 (ENSSHAG00000021347) #13 COL14A1 (ENSSHAG00000018289) #14 DEPTOR (ENSSHAG00000017931) #15 DSCC1 (ENSSHAG00000017891) #16 TAF2 (ENSSHAG00000017807) #17 ENSSHAG00000017449 #18 CCN3 (ENSSHAG00000017261) #19 ENSSHAG00000016675 MAL2 (ENSSHAG00000030082) #20 COLEC10 (ENSSHAG00000022071) #21 TNFRSF11B (ENSSHAG00000015911) #22 SAMD12 (ENSSHAG00000012647) #23 EXT1 (ENSSHAG00000010065) #25 MED30 (ENSSHAG00000004816) #26 ENSSHAG00000028668 RAD21 (ENSSHAG00000015624) #28 UTP23 (ENSSHAG00000024119) #29 EIF3H (ENSSHAG00000014977) #30 TRPS1 (ENSSHAG00000002542) #31 ENSSHAG00000029869 CSMD3 (ENSSHAG00000004988) #36 KCNV1 (ENSSHAG00000031716) #37 ENSSHAG00000009572 SYBU (ENSSHAG00000028118) EBAG9 (ENSSHAG00000025825) PKHD1L1 (ENSSHAG00000003094) Opossum MODERN SPECIES 2 ENSMODG00000048911 #14 ENSMODG00000003690 #14 DEPTOR (ENSMODG00000025626) #15 DSCC1 (ENSMODG00000003856) #16 ENSMODG00000040574 ENSMODG00000045886 TAF2 (ENSMODG00000003943) #17 ENSMODG00000044265 #18 ENSMODG00000036390 ENPP2 (ENSMODG00000003977) #18 CCN3 (ENSMODG00000003994) #19 ENSMODG00000004003 MAL2 (ENSMODG00000004011) #20 ENSMODG00000004037 COLEC10 (ENSMODG00000049233) #21 TNFRSF11B (ENSMODG00000004064) #22 ENSMODG00000024468 ENSMODG00000049307 SAMD12 (ENSMODG00000004068) #23 EXT1 (ENSMODG00000004092) #25 MED30 (ENSMODG00000004103) #26 ENSMODG00000033067 RAD21 (ENSMODG00000004133) #28 UTP23 (ENSMODG00000004140) #29 EIF3H (ENSMODG00000004154) #30 TRPS1 (ENSMODG00000004181) #31 ENSMODG00000047826 ENSMODG00000024476 CSMD3 (ENSMODG00000004489) #36 ENSMODG00000028964 ENSMODG00000004517 Eutheria ANCESTRAL SPECIES 15 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Primates ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Simiiformes ANCESTRAL SPECIES 20 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Catarrhini ANCESTRAL SPECIES 15 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Hominoidea ANCESTRAL SPECIES 14 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00390000012976.c.b.b.b.a.a.a.e ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Hominidae ANCESTRAL SPECIES 15 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00390000012976.c.b.b.b.a.a.a.e ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00390000012976.c.b.b.b.a.a.a.e ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Gorilla DUPLICATION Gorilla MODERN SPECIES 265 ENSGGOG00000036696 #22 Gorilla MODERN SPECIES 264 ENSGGOG00000039306 #22 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Pan ANCESTRAL SPECIES 11 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00950000182922.a.a.a.b.a.a.b.a.b ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Chimpanzee MODERN SPECIES 21 ENSPTRG00000049929 DERL1 (ENSPTRG00000020546) #8 ZHX2 (ENSPTRG00000020545) #9 HAS2 (ENSPTRG00000020544) #10 SNTB1 (ENSPTRG00000020543) #11 MTBP (ENSPTRG00000020542) #12 MRPL13 (ENSPTRG00000020541) #13 COL14A1 (ENSPTRG00000020539) #14 DEPTOR (ENSPTRG00000020537) #15 DSCC1 (ENSPTRG00000020536) #16 TAF2 (ENSPTRG00000020535) #17 ENPP2 (ENSPTRG00000020534) #18 CCN3 (ENSPTRG00000020531) #19 MAL2 (ENSPTRG00000043985) #20 COLEC10 (ENSPTRG00000020529) #21 TNFRSF11B (ENSPTRG00000020528) #22 ENSPTRG00000050850 SAMD12 (ENSPTRG00000043300) #23 EXT1 (ENSPTRG00000020526) #25 MED30 (ENSPTRG00000020525) #26 SLC30A8 (ENSPTRG00000020523) AARD (ENSPTRG00000030949) RAD21 (ENSPTRG00000020522) #28 UTP23 (ENSPTRG00000020521) #29 EIF3H (ENSPTRG00000020520) #30 TRPS1 (ENSPTRG00000020519) #31 CSMD3 (ENSPTRG00000020517) #36 ENSPTRG00000046250 KCNV1 (ENSPTRG00000020515) #37 SYBU (ENSPTRG00000020514) EBAG9 (ENSPTRG00000020513) Bonobo MODERN SPECIES 21 ENSPPAG00000043324 DERL1 (ENSPPAG00000043318) #8 ZHX2 (ENSPPAG00000025743) #9 HAS2 (ENSPPAG00000030801) #10 SNTB1 (ENSPPAG00000035389) #11 MTBP (ENSPPAG00000027580) #12 MRPL13 (ENSPPAG00000043579) #13 COL14A1 (ENSPPAG00000041439) #14 DEPTOR (ENSPPAG00000040120) #15 DSCC1 (ENSPPAG00000017880) #16 TAF2 (ENSPPAG00000034878) #17 ENPP2 (ENSPPAG00000031694) #18 CCN3 (ENSPPAG00000029589) #19 MAL2 (ENSPPAG00000015789) #20 COLEC10 (ENSPPAG00000043531) #21 TNFRSF11B (ENSPPAG00000030377) #22 ENSPPAG00000040498 #23 EXT1 (ENSPPAG00000020428) #25 MED30 (ENSPPAG00000034317) #26 SLC30A8 (ENSPPAG00000018621) ENSPPAG00000043380 RAD21 (ENSPPAG00000005971) #28 UTP23 (ENSPPAG00000028660) #29 EIF3H (ENSPPAG00000006983) #30 ENSPPAG00000038552 #31 ENSPPAG00000038639 ENSPPAG00000042368 CSMD3 (ENSPPAG00000040179) #36 ENSPPAG00000020824 KCNV1 (ENSPPAG00000041267) #37 SYBU (ENSPPAG00000033028) Human MODERN SPECIES 20 TBC1D31 (ENSG00000156787) #7 DERL1 (ENSG00000136986) #8 ZHX2 (ENSG00000178764) #9 HAS2 (ENSG00000170961) #10 SNTB1 (ENSG00000172164) #11 MTBP (ENSG00000172167) #12 MRPL13 (ENSG00000172172) #13 COL14A1 (ENSG00000187955) #14 DEPTOR (ENSG00000155792) #15 DSCC1 (ENSG00000136982) #16 TAF2 (ENSG00000064313) #17 ENPP2 (ENSG00000136960) #18 CCN3 (ENSG00000136999) #19 MAL2 (ENSG00000147676) #20 COLEC10 (ENSG00000184374) #21 TNFRSF11B (ENSG00000164761) #22 SAMD12 (ENSG00000177570) #23 EXT1 (ENSG00000182197) #25 MED30 (ENSG00000164758) #26 SLC30A8 (ENSG00000164756) AARD (ENSG00000205002) RAD21 (ENSG00000164754) #28 UTP23 (ENSG00000147679) #29 EIF3H (ENSG00000147677) #30 TRPS1 (ENSG00000104447) #31 CSMD3 (ENSG00000164796) #36 KCNV1 (ENSG00000164794) #37 SYBU (ENSG00000147642) ENSG00000289767 EBAG9 (ENSG00000147654) PKHD1L1 (ENSG00000205038) Orangutan MODERN SPECIES 21 TBC1D31 (ENSPPYG00000019034) #7 DERL1 (ENSPPYG00000018852) #8 ZHX2 (ENSPPYG00000018851) #9 HAS2 (ENSPPYG00000018850) #10 SNTB1 (ENSPPYG00000018849) #11 MTBP (ENSPPYG00000018848) #12 MRPL13 (ENSPPYG00000018847) #13 COL14A1 (ENSPPYG00000018846) #14 DEPTOR (ENSPPYG00000018845) #15 DSCC1 (ENSPPYG00000018844) #16 TAF2 (ENSPPYG00000018843) #17 ENPP2 (ENSPPYG00000018842) #18 CCN3 (ENSPPYG00000018841) #19 MAL2 (ENSPPYG00000030093) #20 COLEC10 (ENSPPYG00000018839) #21 TNFRSF11B (ENSPPYG00000018838) #22 SAMD12 (ENSPPYG00000018837) #23 EXT1 (ENSPPYG00000018836) #25 MED30 (ENSPPYG00000018835) #26 SLC30A8 (ENSPPYG00000018834) AARD (ENSPPYG00000018833) RAD21 (ENSPPYG00000018832) #28 UTP23 (ENSPPYG00000018831) #29 EIF3H (ENSPPYG00000018830) #30 TRPS1 (ENSPPYG00000018829) #31 ENSPPYG00000036128 CSMD3 (ENSPPYG00000018828) #36 KCNV1 (ENSPPYG00000018827) #37 SYBU (ENSPPYG00000018825) EBAG9 (ENSPPYG00000018824) PKHD1L1 (ENSPPYG00000035417) Gibbon MODERN SPECIES 6 ENSNLEG00000033365 HAS2 (ENSNLEG00000005191) #10 ENSNLEG00000027184 SNTB1 (ENSNLEG00000005173) #11 MTBP (ENSNLEG00000005134) #12 MRPL13 (ENSNLEG00000028268) #13 COL14A1 (ENSNLEG00000005031) #14 DEPTOR (ENSNLEG00000005015) #15 DSCC1 (ENSNLEG00000005005) #16 TAF2 (ENSNLEG00000004934) #17 ENPP2 (ENSNLEG00000004918) #18 ENSNLEG00000028485 CCN3 (ENSNLEG00000004910) #19 ENSNLEG00000004905 #20 COLEC10 (ENSNLEG00000004892) #21 TNFRSF11B (ENSNLEG00000004882) #22 SAMD12 (ENSNLEG00000004875) #23 EXT1 (ENSNLEG00000004870) #25 MED30 (ENSNLEG00000004863) #26 SLC30A8 (ENSNLEG00000027604) AARD (ENSNLEG00000031855) RAD21 (ENSNLEG00000004817) #28 UTP23 (ENSNLEG00000032995) #29 EIF3H (ENSNLEG00000033146) #30 TRPS1 (ENSNLEG00000004770) #31 ENSNLEG00000027500 CSMD3 (ENSNLEG00000004538) #36 KCNV1 (ENSNLEG00000004533) #37 SYBU (ENSNLEG00000004459) EBAG9 (ENSNLEG00000030785) PKHD1L1 (ENSNLEG00000029337) Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q.e.a Rhinopithecus ANCESTRAL SPECIES 368 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 Black snub-nosed monkey MODERN SPECIES 89 TAF2 (ENSRBIG00000040004) #17 ENPP2 (ENSRBIG00000042701) #18 CCN3 (ENSRBIG00000034217) #19 MAL2 (ENSRBIG00000028291) #20 COLEC10 (ENSRBIG00000031148) #21 TNFRSF11B (ENSRBIG00000041828) #22 SAMD12 (ENSRBIG00000028786) #23 EXT1 (ENSRBIG00000042500) #25 MED30 (ENSRBIG00000033692) #26 SLC30A8 (ENSRBIG00000041440) AARD (ENSRBIG00000035629) RAD21 (ENSRBIG00000039226) #28 UTP23 (ENSRBIG00000026267) #29 EIF3H (ENSRBIG00000041058) #30 Golden snub-nosed monkey MODERN SPECIES 3338 TNFRSF11B (ENSRROG00000017465) #22 SAMD12 (ENSRROG00000033159) #23 EXT1 (ENSRROG00000032030) #25 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q.e.a Vervet Monkey MODERN SPECIES 27 ENSCSAG00000010664 DERL1 (ENSCSAG00000010675) #8 ZHX2 (ENSCSAG00000018613) #9 HAS2 (ENSCSAG00000010685) #10 SNTB1 (ENSCSAG00000010695) #11 MTBP (ENSCSAG00000010710) #12 MRPL13 (ENSCSAG00000010722) #13 COL14A1 (ENSCSAG00000010745) #14 DEPTOR (ENSCSAG00000010756) #15 DSCC1 (ENSCSAG00000010795) #16 TAF2 (ENSCSAG00000010814) #17 ENPP2 (ENSCSAG00000010835) #18 CCN3 (ENSCSAG00000010843) #19 MAL2 (ENSCSAG00000010849) #20 COLEC10 (ENSCSAG00000010854) #21 TNFRSF11B (ENSCSAG00000010858) #22 ENSCSAG00000018611 SAMD12 (ENSCSAG00000010860) #23 EXT1 (ENSCSAG00000010872) #25 MED30 (ENSCSAG00000010875) #26 ENSCSAG00000010884 SLC30A8 (ENSCSAG00000010907) AARD (ENSCSAG00000010917) RAD21 (ENSCSAG00000010927) #28 UTP23 (ENSCSAG00000010933) #29 TRPS1 (ENSCSAG00000010958) #31 ENSCSAG00000010978 CSMD3 (ENSCSAG00000011193) #36 KCNV1 (ENSCSAG00000011260) #37 ENSCSAG00000011264 SYBU (ENSCSAG00000011296) Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00530000063156.b #8 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00390000002837.n ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00390000002837.n ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Olive baboon MODERN SPECIES 18 ENSPANG00000020681 #10 ENSPANG00000042928 SNTB1 (ENSPANG00000011900) #11 MTBP (ENSPANG00000001116) #12 MRPL13 (ENSPANG00000037222) #13 COL14A1 (ENSPANG00000011145) #14 ENSPANG00000040476 ENSPANG00000035077 ENSPANG00000040563 DEPTOR (ENSPANG00000014432) #15 DSCC1 (ENSPANG00000008385) #16 TAF2 (ENSPANG00000026219) #17 ENPP2 (ENSPANG00000016168) #18 CCN3 (ENSPANG00000006166) #19 MAL2 (ENSPANG00000006869) #20 TNFRSF11B (ENSPANG00000020682) #22 COLEC10 (ENSPANG00000011014) #21 SAMD12 (ENSPANG00000018159) #23 ENSPANG00000047325 EXT1 (ENSPANG00000007690) #25 MED30 (ENSPANG00000024750) #26 ENSPANG00000047712 ENSPANG00000042287 ENSPANG00000050308 ENSPANG00000015562 SLC30A8 (ENSPANG00000021435) AARD (ENSPANG00000044146) RAD21 (ENSPANG00000006012) #28 UTP23 (ENSPANG00000043891) #29 EIF3H (ENSPANG00000005206) #30 ENSPANG00000045509 Cercopithecinae_d ANCESTRAL SPECIES 78 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00390000002837.n ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Sooty mangabey MODERN SPECIES 633 HAS2 (ENSCATG00000033391) #10 ENSCATG00000020385 SNTB1 (ENSCATG00000007777) #11 MTBP (ENSCATG00000040612) #12 MRPL13 (ENSCATG00000044803) #13 COL14A1 (ENSCATG00000017126) #14 ENSCATG00000029865 DEPTOR (ENSCATG00000044620) #15 DSCC1 (ENSCATG00000029460) #16 TAF2 (ENSCATG00000036444) #17 ENPP2 (ENSCATG00000041981) #18 CCN3 (ENSCATG00000034379) #19 MAL2 (ENSCATG00000021493) #20 COLEC10 (ENSCATG00000019671) #21 TNFRSF11B (ENSCATG00000043464) #22 SAMD12 (ENSCATG00000036880) #23 EXT1 (ENSCATG00000044568) #25 MED30 (ENSCATG00000038796) #26 ENSCATG00000020336 SLC30A8 (ENSCATG00000036467) AARD (ENSCATG00000044565) RAD21 (ENSCATG00000035049) #28 UTP23 (ENSCATG00000035129) #29 EIF3H (ENSCATG00000000432) #30 TRPS1 (ENSCATG00000035927) #31 CSMD3 (ENSCATG00000033952) #36 KCNV1 (ENSCATG00000032152) #37 SYBU (ENSCATG00000037874) EBAG9 (ENSCATG00000003294) PKHD1L1 (ENSCATG00000018087) Drill MODERN SPECIES 364 ENSMLEG00000042183 DERL1 (ENSMLEG00000025656) #8 ZHX2 (ENSMLEG00000025265) #9 HAS2 (ENSMLEG00000020771) #10 SNTB1 (ENSMLEG00000036288) #11 MTBP (ENSMLEG00000031711) #12 MRPL13 (ENSMLEG00000009613) #13 COL14A1 (ENSMLEG00000033957) #14 DEPTOR (ENSMLEG00000039489) #15 DSCC1 (ENSMLEG00000040990) #16 TAF2 (ENSMLEG00000037737) #17 ENPP2 (ENSMLEG00000034395) #18 CCN3 (ENSMLEG00000031569) #19 MAL2 (ENSMLEG00000041488) #20 COLEC10 (ENSMLEG00000036370) #21 TNFRSF11B (ENSMLEG00000037940) #22 SAMD12 (ENSMLEG00000035526) #23 ENSMLEG00000022517 #24 Macaca ANCESTRAL SPECIES 14 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000160805.b ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00390000002837.n ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Pig-tailed macaque MODERN SPECIES 419 DERL1 (ENSMNEG00000041012) #8 ZHX2 (ENSMNEG00000023076) #9 ENSMNEG00000044687 HAS2 (ENSMNEG00000035700) #10 SNTB1 (ENSMNEG00000032225) #11 MTBP (ENSMNEG00000040905) #12 MRPL13 (ENSMNEG00000034159) #13 COL14A1 (ENSMNEG00000034221) #14 ENSMNEG00000036309 DEPTOR (ENSMNEG00000028415) #15 TAF2 (ENSMNEG00000034231) #17 ENPP2 (ENSMNEG00000031748) #18 CCN3 (ENSMNEG00000027027) #19 MAL2 (ENSMNEG00000027535) #20 COLEC10 (ENSMNEG00000036282) #21 TNFRSF11B (ENSMNEG00000039819) #22 SAMD12 (ENSMNEG00000033633) #23 EXT1 (ENSMNEG00000044110) #25 MED30 (ENSMNEG00000029811) #26 ENSMNEG00000024915 Macaca_a ANCESTRAL SPECIES 16 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT01100000263539.b.a.a.a.b.b.b.a.b.a.a.a.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00730000111097.f.a.b.a.b.b ENSGT00390000002837.n ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.a.b ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a Rhesus MODERN SPECIES 18 HAS2 (ENSMMUG00000045043) #10 ENSMMUG00000056085 SNTB1 (ENSMMUG00000002607) #11 MTBP (ENSMMUG00000002601) #12 MRPL13 (ENSMMUG00000002599) #13 COL14A1 (ENSMMUG00000002595) #14 DEPTOR (ENSMMUG00000002594) #15 DSCC1 (ENSMMUG00000002788) #16 TAF2 (ENSMMUG00000014702) #17 ENPP2 (ENSMMUG00000004903) #18 ENSMMUG00000050392 CCN3 (ENSMMUG00000005631) #19 ENSMMUG00000053962 MAL2 (ENSMMUG00000004296) #20 COLEC10 (ENSMMUG00000000266) #21 TNFRSF11B (ENSMMUG00000016485) #22 SAMD12 (ENSMMUG00000004846) #23 ENSMMUG00000014786 EXT1 (ENSMMUG00000008635) #25 MED30 (ENSMMUG00000002068) #26 ENSMMUG00000052668 SLC30A8 (ENSMMUG00000060321) AARD (ENSMMUG00000028933) RAD21 (ENSMMUG00000020285) #28 ENSMMUG00000056417 UTP23 (ENSMMUG00000020284) #29 EIF3H (ENSMMUG00000020283) #30 ENSMMUG00000051729 ENSMMUG00000001087 ENSMMUG00000052470 TRPS1 (ENSMMUG00000003435) #31 Crab-eating macaque MODERN SPECIES 18 MRPL13 (ENSMFAG00000009755) #13 ENSMFAG00000001138 COL14A1 (ENSMFAG00000043483) #14 ENSMFAG00000003874 ENSMFAG00000048778 DEPTOR (ENSMFAG00000040290) #15 DSCC1 (ENSMFAG00000003521) #16 ENSMFAG00000055201 TAF2 (ENSMFAG00000003672) #17 ENPP2 (ENSMFAG00000002827) #18 ENSMFAG00000059209 CCN3 (ENSMFAG00000028128) #19 ENSMFAG00000048574 MAL2 (ENSMFAG00000059893) #20 COLEC10 (ENSMFAG00000065700) #21 TNFRSF11B (ENSMFAG00000040874) #22 SAMD12 (ENSMFAG00000043380) #23 ENSMFAG00000033540 ENSMFAG00000052438 ENSMFAG00000060244 ENSMFAG00000052405 EXT1 (ENSMFAG00000002066) #25 MED30 (ENSMFAG00000032092) #26 ENSMFAG00000000112 ENSMFAG00000039679 ENSMFAG00000048811 SLC30A8 (ENSMFAG00000047830) AARD (ENSMFAG00000036725) RAD21 (ENSMFAG00000032636) #28 UTP23 (ENSMFAG00000003374) #29 EIF3H (ENSMFAG00000004699) #30 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000153335.b ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00910000148276 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Cebidae ANCESTRAL SPECIES 19 ENSGT00910000147627 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000153335.b ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00910000148276 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Marmoset MODERN SPECIES 7 ENSCJAG00000081290 ENSCJAG00000070598 SNTB1 (ENSCJAG00000005315) #11 MTBP (ENSCJAG00000005324) #12 ENSCJAG00000005359 #13 COL14A1 (ENSCJAG00000005370) #14 DEPTOR (ENSCJAG00000005497) #15 DSCC1 (ENSCJAG00000005518) #16 ENSCJAG00000081412 TAF2 (ENSCJAG00000005547) #17 ENPP2 (ENSCJAG00000005628) #18 ENSCJAG00000073292 CCN3 (ENSCJAG00000005759) #19 MAL2 (ENSCJAG00000043157) #20 COLEC10 (ENSCJAG00000047934) #21 TNFRSF11B (ENSCJAG00000005804) #22 ENSCJAG00000058000 ENSCJAG00000069822 SAMD12 (ENSCJAG00000046228) #23 ENSCJAG00000071342 EXT1 (ENSCJAG00000005815) #25 ENSCJAG00000005824 #26 ENSCJAG00000078234 SLC30A8 (ENSCJAG00000005833) ENSCJAG00000082548 AARD (ENSCJAG00000077370) RAD21 (ENSCJAG00000005844) #28 UTP23 (ENSCJAG00000005903) #29 EIF3H (ENSCJAG00000047852) #30 ENSCJAG00000072247 ENSCJAG00000086733 Cebidae_a ANCESTRAL SPECIES 71 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000153335.b ENSGT00940000154550.a.f.e ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a.d #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 Capuchin MODERN SPECIES 68 ENSCCAG00000020980 ENSCCAG00000017303 HAS2 (ENSCCAG00000038044) #10 ENSCCAG00000036663 SNTB1 (ENSCCAG00000000789) #11 MTBP (ENSCCAG00000023289) #12 MRPL13 (ENSCCAG00000034544) #13 COL14A1 (ENSCCAG00000008634) #14 DEPTOR (ENSCCAG00000021712) #15 DSCC1 (ENSCCAG00000021579) #16 TAF2 (ENSCCAG00000023816) #17 ENPP2 (ENSCCAG00000029009) #18 CCN3 (ENSCCAG00000032102) #19 MAL2 (ENSCCAG00000029707) #20 COLEC10 (ENSCCAG00000024940) #21 TNFRSF11B (ENSCCAG00000036831) #22 SAMD12 (ENSCCAG00000033351) #23 EXT1 (ENSCCAG00000002703) #25 MED30 (ENSCCAG00000033344) #26 SLC30A8 (ENSCCAG00000025975) AARD (ENSCCAG00000028143) RAD21 (ENSCCAG00000035186) #28 UTP23 (ENSCCAG00000030228) #29 EIF3H (ENSCCAG00000018374) #30 ENSCCAG00000033694 TRPS1 (ENSCCAG00000027398) #31 Bolivian squirrel monkey MODERN SPECIES 95 ENSSBOG00000028129 ENSSBOG00000007050 HAS2 (ENSSBOG00000023136) #10 SNTB1 (ENSSBOG00000027128) #11 MTBP (ENSSBOG00000030533) #12 MRPL13 (ENSSBOG00000003037) #13 ENSSBOG00000026318 COL14A1 (ENSSBOG00000035062) #14 DEPTOR (ENSSBOG00000031834) #15 DSCC1 (ENSSBOG00000035314) #16 TAF2 (ENSSBOG00000019229) #17 ENPP2 (ENSSBOG00000014187) #18 CCN3 (ENSSBOG00000029191) #19 MAL2 (ENSSBOG00000033924) #20 COLEC10 (ENSSBOG00000026902) #21 TNFRSF11B (ENSSBOG00000027754) #22 SAMD12 (ENSSBOG00000029345) #23 EXT1 (ENSSBOG00000034662) #25 MED30 (ENSSBOG00000032654) #26 SLC30A8 (ENSSBOG00000000987) AARD (ENSSBOG00000029030) ENSSBOG00000030682 #28 UTP23 (ENSSBOG00000018914) #29 EIF3H (ENSSBOG00000024775) #30 TRPS1 (ENSSBOG00000023985) #31 CSMD3 (ENSSBOG00000023822) #36 ENSSBOG00000023068 Mas night monkey MODERN SPECIES 534 ENSANAG00000036297 ENSANAG00000038118 CCN3 (ENSANAG00000028082) #19 MAL2 (ENSANAG00000036466) #20 COLEC10 (ENSANAG00000025495) #21 TNFRSF11B (ENSANAG00000021879) #22 ENSANAG00000027343 SAMD12 (ENSANAG00000029631) #23 EXT1 (ENSANAG00000022077) #25 MED30 (ENSANAG00000028696) #26 ENSANAG00000025569 SLC30A8 (ENSANAG00000020652) AARD (ENSANAG00000034364) RAD21 (ENSANAG00000032472) #28 ENSANAG00000025273 #29 EIF3H (ENSANAG00000025467) #30 TRPS1 (ENSANAG00000035747) #31 ENSANAG00000013925 ENSANAG00000013799 ENSANAG00000026654 CSMD3 (ENSANAG00000001769) #36 Tarsier MODERN SPECIES 7097 DSCC1 (ENSTSYG00000004981) #16 TAF2 (ENSTSYG00000004980) #17 ENPP2 (ENSTSYG00000001901) #18 CCN3 (ENSTSYG00000026558) #19 MAL2 (ENSTSYG00000034219) #20 COLEC10 (ENSTSYG00000011596) #21 TNFRSF11B (ENSTSYG00000028884) #22 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.q Lemuriformes ANCESTRAL SPECIES 36 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 Lemuriformes_a ANCESTRAL SPECIES 179 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 Greater bamboo lemur MODERN SPECIES 591 ENSPSMG00000021750 ENSPSMG00000021755 HAS2 (ENSPSMG00000021763) #10 ENSPSMG00000021769 SNTB1 (ENSPSMG00000021782) #11 MTBP (ENSPSMG00000021807) #12 MRPL13 (ENSPSMG00000021817) #13 COL14A1 (ENSPSMG00000022031) #14 DEPTOR (ENSPSMG00000022131) #15 DSCC1 (ENSPSMG00000022143) #16 TAF2 (ENSPSMG00000022194) #17 ENPP2 (ENSPSMG00000022281) #18 CCN3 (ENSPSMG00000022315) #19 MAL2 (ENSPSMG00000022322) #20 COLEC10 (ENSPSMG00000022326) #21 TNFRSF11B (ENSPSMG00000022348) #22 SAMD12 (ENSPSMG00000022364) #23 EXT1 (ENSPSMG00000022372) #25 MED30 (ENSPSMG00000022384) #26 SLC30A8 (ENSPSMG00000022398) AARD (ENSPSMG00000022402) RAD21 (ENSPSMG00000022422) #28 UTP23 (ENSPSMG00000022433) #29 ENSPSMG00000022442 EIF3H (ENSPSMG00000022485) #30 TRPS1 (ENSPSMG00000022518) #31 Coquerels sifaka MODERN SPECIES 355 SNTB1 (ENSPCOG00000022410) #11 MTBP (ENSPCOG00000021310) #12 MRPL13 (ENSPCOG00000016230) #13 COL14A1 (ENSPCOG00000021752) #14 DEPTOR (ENSPCOG00000020090) #15 DSCC1 (ENSPCOG00000015658) #16 TAF2 (ENSPCOG00000017599) #17 ENPP2 (ENSPCOG00000015061) #18 CCN3 (ENSPCOG00000021959) #19 MAL2 (ENSPCOG00000021603) #20 COLEC10 (ENSPCOG00000023253) #21 TNFRSF11B (ENSPCOG00000027808) #22 SAMD12 (ENSPCOG00000015860) #23 EXT1 (ENSPCOG00000021578) #25 Mouse lemur MODERN SPECIES 31 PKHD1L1 (ENSMICG00000012952) EBAG9 (ENSMICG00000013014) SYBU (ENSMICG00000013019) ENSMICG00000045891 KCNV1 (ENSMICG00000044286) #37 MTBP (ENSMICG00000014639) #12 MRPL13 (ENSMICG00000014630) #13 COL14A1 (ENSMICG00000017307) #14 DEPTOR (ENSMICG00000017305) #15 DSCC1 (ENSMICG00000043533) #16 TAF2 (ENSMICG00000017295) #17 ENPP2 (ENSMICG00000017293) #18 CCN3 (ENSMICG00000026675) #19 MAL2 (ENSMICG00000043274) #20 COLEC10 (ENSMICG00000026547) #21 TNFRSF11B (ENSMICG00000015474) #22 SAMD12 (ENSMICG00000047826) #23 EXT1 (ENSMICG00000010572) #25 MED30 (ENSMICG00000010568) #26 SLC30A8 (ENSMICG00000010560) AARD (ENSMICG00000038083) RAD21 (ENSMICG00000032869) #28 UTP23 (ENSMICG00000034720) #29 ENSMICG00000015285 #30 TRPS1 (ENSMICG00000011103) #31 CSMD3 (ENSMICG00000006577) #36 SNTB1 (ENSMICG00000046201) #11 HAS2 (ENSMICG00000034422) #10 ENSMICG00000009951 DERL1 (ENSMICG00000005084) #8 TBC1D31 (ENSMICG00000032736) #7 Bushbaby MODERN SPECIES 119 DERL1 (ENSOGAG00000006958) #8 ZHX2 (ENSOGAG00000026824) #9 HAS2 (ENSOGAG00000011778) #10 ENSOGAG00000032433 SNTB1 (ENSOGAG00000034441) #11 MTBP (ENSOGAG00000014287) #12 MRPL13 (ENSOGAG00000014284) #13 COL14A1 (ENSOGAG00000014273) #14 DEPTOR (ENSOGAG00000014267) #15 DSCC1 (ENSOGAG00000014262) #16 TAF2 (ENSOGAG00000031614) #17 ENPP2 (ENSOGAG00000007652) #18 CCN3 (ENSOGAG00000007651) #19 MAL2 (ENSOGAG00000007648) #20 COLEC10 (ENSOGAG00000002035) #21 TNFRSF11B (ENSOGAG00000002033) #22 EXT1 (ENSOGAG00000016548) #25 MED30 (ENSOGAG00000025376) #26 SLC30A8 (ENSOGAG00000005867) ENSOGAG00000017026 #28 UTP23 (ENSOGAG00000017024) #29 EIF3H (ENSOGAG00000008905) #30 TRPS1 (ENSOGAG00000005076) #31 CSMD3 (ENSOGAG00000008194) #36 ENSOGAG00000027761 ENSOGAG00000027860 KCNV1 (ENSOGAG00000026819) #37 SYBU (ENSOGAG00000006559) EBAG9 (ENSOGAG00000006554) PKHD1L1 (ENSOGAG00000006525) ENY2 (ENSOGAG00000030254) Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Tree shrew MODERN SPECIES 2693 ENSTBEG00000013086 ENSTBEG00000012898 TNFRSF11B (ENSTBEG00000012883) #22 ENSTBEG00000012809 Glires ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Rodentia ANCESTRAL SPECIES 19 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Sciuridae ANCESTRAL SPECIES 17 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.b ENSGT00940000157594 ENSGT00390000011748 Marmotini ANCESTRAL SPECIES 10 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT01070000253911 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.b ENSGT00940000157594 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT01070000253911 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155405.qb ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.b Arctic ground squirrel MODERN SPECIES 128 MRPL13 (ENSUPAG00010017724) #13 COL14A1 (ENSUPAG00010017737) #14 DEPTOR (ENSUPAG00010017897) #15 DSCC1 (ENSUPAG00010017916) #16 TAF2 (ENSUPAG00010017939) #17 ENPP2 (ENSUPAG00010018003) #18 CCN3 (ENSUPAG00010018080) #19 MAL2 (ENSUPAG00010018087) #20 COLEC10 (ENSUPAG00010018089) #21 TNFRSF11B (ENSUPAG00010018091) #22 SAMD12 (ENSUPAG00010018097) #23 EXT1 (ENSUPAG00010018101) #25 MED30 (ENSUPAG00010018114) #26 SLC30A8 (ENSUPAG00010018123) AARD (ENSUPAG00010018136) ENSUPAG00010018138 RAD21 (ENSUPAG00010018144) #28 UTP23 (ENSUPAG00010018154) #29 EIF3H (ENSUPAG00010018163) #30 TRPS1 (ENSUPAG00010018184) #31 Squirrel MODERN SPECIES 70 DERL1 (ENSSTOG00000028368) #8 ZHX2 (ENSSTOG00000011248) #9 ENSSTOG00000021688 HAS2 (ENSSTOG00000015152) #10 SNTB1 (ENSSTOG00000008785) #11 MTBP (ENSSTOG00000008750) #12 MRPL13 (ENSSTOG00000014264) #13 COL14A1 (ENSSTOG00000025510) #14 DEPTOR (ENSSTOG00000013845) #15 DSCC1 (ENSSTOG00000013838) #16 TAF2 (ENSSTOG00000013027) #17 ENPP2 (ENSSTOG00000001935) #18 CCN3 (ENSSTOG00000010067) #19 MAL2 (ENSSTOG00000010053) #20 COLEC10 (ENSSTOG00000001872) #21 TNFRSF11B (ENSSTOG00000009482) #22 SAMD12 (ENSSTOG00000021964) #23 EXT1 (ENSSTOG00000015593) #25 MED30 (ENSSTOG00000000638) #26 SLC30A8 (ENSSTOG00000010500) AARD (ENSSTOG00000030141) RAD21 (ENSSTOG00000014316) #28 UTP23 (ENSSTOG00000001411) #29 EIF3H (ENSSTOG00000001403) #30 TRPS1 (ENSSTOG00000026496) #31 ENSSTOG00000032777 CSMD3 (ENSSTOG00000013255) #36 ENSSTOG00000031426 KCNV1 (ENSSTOG00000020827) #37 SYBU (ENSSTOG00000015331) EBAG9 (ENSSTOG00000015326) Alpin marmot MODERN SPECIES 18 ZHX2 (ENSMMMG00000001255) #9 ENSMMMG00000001230 HAS2 (ENSMMMG00000001210) #10 SNTB1 (ENSMMMG00000001178) #11 MTBP (ENSMMMG00000001106) #12 ENSMMMG00000001078 ENSMMMG00000001068 COL14A1 (ENSMMMG00000000811) #14 DEPTOR (ENSMMMG00000000753) #15 DSCC1 (ENSMMMG00000000722) #16 TAF2 (ENSMMMG00000000650) #17 ENPP2 (ENSMMMG00000000388) #18 CCN3 (ENSMMMG00000000353) #19 MAL2 (ENSMMMG00000000338) #20 COLEC10 (ENSMMMG00000000318) #21 TNFRSF11B (ENSMMMG00000000286) #22 ENSMMMG00000000274 SAMD12 (ENSMMMG00000000256) #23 EXT1 (ENSMMMG00000000213) #25 MED30 (ENSMMMG00000000191) #26 SLC30A8 (ENSMMMG00000000163) ENSMMMG00000000117 ENSMMMG00000000094 RAD21 (ENSMMMG00000000078) #28 ENSMMMG00000017650 UTP23 (ENSMMMG00000017647) #29 EIF3H (ENSMMMG00000017643) #30 TRPS1 (ENSMMMG00000017500) #31 ENSMMMG00000017486 ENSMMMG00000017480 ENSMMMG00000017467 Eurasian red squirrel MODERN SPECIES DERL1 (ENSSVLG00005003662) #8 ZHX2 (ENSSVLG00005003642) #9 ENSSVLG00005003592 HAS2 (ENSSVLG00005003574) #10 SNTB1 (ENSSVLG00005003561) #11 MTBP (ENSSVLG00005003515) #12 ENSSVLG00005003470 #13 COL14A1 (ENSSVLG00005003119) #14 DEPTOR (ENSSVLG00005002977) #15 DSCC1 (ENSSVLG00005002956) #16 TAF2 (ENSSVLG00005002941) #17 ENPP2 (ENSSVLG00005002697) #18 CCN3 (ENSSVLG00005002612) #19 MAL2 (ENSSVLG00005002595) #20 COLEC10 (ENSSVLG00005002580) #21 TNFRSF11B (ENSSVLG00005002562) #22 SAMD12 (ENSSVLG00005002548) #23 EXT1 (ENSSVLG00005002516) #25 MED30 (ENSSVLG00005002500) #26 SLC30A8 (ENSSVLG00005002466) AARD (ENSSVLG00005002450) RAD21 (ENSSVLG00005002416) #28 ENSSVLG00005002391 UTP23 (ENSSVLG00005002373) #29 EIF3H (ENSSVLG00005002349) #30 ENSSVLG00005002331 TRPS1 (ENSSVLG00005002245) #31 ENSSVLG00005002187 ENSSVLG00005002158 ENSSVLG00005002148 CSMD3 (ENSSVLG00005001710) #36 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000156357 ENSGT00390000013305.a.b ENSGT00940000158862 ENSGT00940000155788 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b.d #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00390000013305.a.b ENSGT00940000158862 ENSGT00940000155788 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420.d #17 ENSGT00390000000420.c.a #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b.d #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Guinea pig MODERN SPECIES ODF1 (ENSCPOG00000012742) UBR5 (ENSCPOG00000009637) RRM2B (ENSCPOG00000011429) NCALD (ENSCPOG00000039689) GRHL2 (ENSCPOG00000005630) SNTB1 (ENSCPOG00000005807) #11 MTBP (ENSCPOG00000005797) #12 MRPL13 (ENSCPOG00000005791) #13 COL14A1 (ENSCPOG00000008500) #14 DEPTOR (ENSCPOG00000013492) #15 TAF2 (ENSCPOG00000014135) #17 ENPP2 (ENSCPOG00000015234) #18 CCN3 (ENSCPOG00000040005) #19 MAL2 (ENSCPOG00000037155) #20 COLEC10 (ENSCPOG00000038012) #21 TNFRSF11B (ENSCPOG00000011271) #22 SAMD12 (ENSCPOG00000002892) #23 EXT1 (ENSCPOG00000013024) #25 MED30 (ENSCPOG00000037565) #26 RAD21 (ENSCPOG00000013244) #28 UTP23 (ENSCPOG00000034561) #29 EIF3H (ENSCPOG00000015366) #30 TRPS1 (ENSCPOG00000008178) #31 ENSCPOG00000032701 #36 CSMD3 (ENSCPOG00000011836) #36 KCNV1 (ENSCPOG00000005491) #37 SYBU (ENSCPOG00000023014) EBAG9 (ENSCPOG00000030274) PKHD1L1 (ENSCPOG00000019466) ENY2 (ENSCPOG00000010988) NUDCD1 (ENSCPOG00000036228) Hystricomorpha_b ANCESTRAL SPECIES 25 ENSGT00390000013305.a.b ENSGT00940000158862 ENSGT00940000155788 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420.d #17 ENSGT00390000000420.c.a #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b.d #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Long-tailed chinchilla MODERN SPECIES 124 UBR5 (ENSCLAG00000005604) RRM2B (ENSCLAG00000005652) NCALD (ENSCLAG00000005101) GRHL2 (ENSCLAG00000004852) SNTB1 (ENSCLAG00000007591) #11 MTBP (ENSCLAG00000005869) #12 MRPL13 (ENSCLAG00000005646) #13 COL14A1 (ENSCLAG00000012798) #14 DEPTOR (ENSCLAG00000006264) #15 ENSCLAG00000005610 #16 ENSCLAG00000009350 #17 ENPP2 (ENSCLAG00000006503) #18 CCN3 (ENSCLAG00000010921) #19 MAL2 (ENSCLAG00000010667) #20 COLEC10 (ENSCLAG00000010463) #21 TNFRSF11B (ENSCLAG00000009388) #22 SAMD12 (ENSCLAG00000008293) #23 EXT1 (ENSCLAG00000007554) #25 MED30 (ENSCLAG00000006087) #26 SLC30A8 (ENSCLAG00000004261) RAD21 (ENSCLAG00000005294) #28 ENSCLAG00000005108 #29 EIF3H (ENSCLAG00000004299) #30 TRPS1 (ENSCLAG00000010192) #31 CSMD3 (ENSCLAG00000008019) #36 KCNV1 (ENSCLAG00000010374) #37 SYBU (ENSCLAG00000009904) EBAG9 (ENSCLAG00000007984) PKHD1L1 (ENSCLAG00000004469) ENY2 (ENSCLAG00000006159) NUDCD1 (ENSCLAG00000005542) Degu MODERN SPECIES 220 ENPP2 (ENSODEG00000001689) #18 CCN3 (ENSODEG00000001482) #19 MAL2 (ENSODEG00000001466) #20 COLEC10 (ENSODEG00000001378) #21 TNFRSF11B (ENSODEG00000001341) #22 ENSODEG00000003569 SAMD12 (ENSODEG00000003396) #23 EXT1 (ENSODEG00000003338) #25 MED30 (ENSODEG00000003291) #26 RAD21 (ENSODEG00000003276) #28 ENSODEG00000003256 #29 EIF3H (ENSODEG00000003042) #30 TRPS1 (ENSODEG00000002685) #31 Naked mole-rat female MODERN SPECIES 13 ENSHGLG00000004847 #11 MTBP (ENSHGLG00000008315) #12 MRPL13 (ENSHGLG00000036413) #13 ENSHGLG00000005913 COL14A1 (ENSHGLG00000006792) #14 DEPTOR (ENSHGLG00000004514) #15 DSCC1 (ENSHGLG00000011220) #16 ENSHGLG00000020151 TAF2 (ENSHGLG00000008618) #17 ENPP2 (ENSHGLG00000009011) #18 ENSHGLG00000007040 CCN3 (ENSHGLG00000005949) #19 ENSHGLG00000045443 MAL2 (ENSHGLG00000043918) #20 COLEC10 (ENSHGLG00000043649) #21 TNFRSF11B (ENSHGLG00000004624) #22 ENSHGLG00000033698 ENSHGLG00000007295 SAMD12 (ENSHGLG00000007620) #23 EXT1 (ENSHGLG00000005861) #25 MED30 (ENSHGLG00000005169) #26 SLC30A8 (ENSHGLG00000004442) RAD21 (ENSHGLG00000004353) #28 ENSHGLG00000037559 ENSHGLG00000037956 #29 ENSHGLG00000004025 #29 ENSHGLG00000003912 #30 TRPS1 (ENSHGLG00000008651) #31 ENSHGLG00000016351 ENSHGLG00000044246 ENSHGLG00000037467 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Myomorpha ANCESTRAL SPECIES 18 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Muroidea ANCESTRAL SPECIES 14 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Cricetidae ANCESTRAL SPECIES 10 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Northern American deer mouse MODERN SPECIES 12 Zhx2 (ENSPEMG00000023804) #9 Slc22a22 (ENSPEMG00000004863) ENSPEMG00000021092 Has2 (ENSPEMG00000026199) #10 Sntb1 (ENSPEMG00000008443) #11 Mtbp (ENSPEMG00000010652) #12 Mrpl13 (ENSPEMG00000016375) #13 Col14a1 (ENSPEMG00000000175) #14 Deptor (ENSPEMG00000015628) #15 Dscc1 (ENSPEMG00000014446) #16 Taf2 (ENSPEMG00000017317) #17 Enpp2 (ENSPEMG00000009296) #18 Ccn3 (ENSPEMG00000015443) #19 Mal2 (ENSPEMG00000025010) #20 Colec10 (ENSPEMG00000028624) #21 Tnfrsf11b (ENSPEMG00000000383) #22 Samd12 (ENSPEMG00000003107) #23 Ext1 (ENSPEMG00000028423) #25 Med30 (ENSPEMG00000010576) #26 Slc30a8 (ENSPEMG00000011367) Aard (ENSPEMG00000025931) ENSPEMG00000028192 Rad21 (ENSPEMG00000014193) #28 ENSPEMG00000015120 #29 Eif3h (ENSPEMG00000017175) #30 Trps1 (ENSPEMG00000008626) #31 Csmd3 (ENSPEMG00000019760) #36 Kcnv1 (ENSPEMG00000024335) #37 ENSPEMG00000010022 Sybu (ENSPEMG00000013342) Ebag9 (ENSPEMG00000008118) Prairie vole MODERN SPECIES 353 Taf2 (ENSMOCG00000009011) #17 Enpp2 (ENSMOCG00000001571) #18 Ccn3 (ENSMOCG00000015325) #19 ENSMOCG00000006364 Mal2 (ENSMOCG00000015886) #20 Colec10 (ENSMOCG00000019114) #21 Tnfrsf11b (ENSMOCG00000019162) #22 Samd12 (ENSMOCG00000000941) #23 Ext1 (ENSMOCG00000010164) #25 Med30 (ENSMOCG00000003186) #26 Slc30a8 (ENSMOCG00000004114) Aard (ENSMOCG00000009240) Rad21 (ENSMOCG00000012525) #28 ENSMOCG00000018221 #29 Eif3h (ENSMOCG00000020728) #30 ENSMOCG00000007048 Trps1 (ENSMOCG00000004602) #31 Csmd3 (ENSMOCG00000005179) #36 Ncam2 (ENSMOCG00000019910) ENSMOCG00000022813 Tmprss15 (ENSMOCG00000000730) ENSMOCG00000005366 Cricetinae ANCESTRAL SPECIES 38 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000164318 #33 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Chinese hamster chok1gshd MODERN SPECIES 207 Taf2 (ENSCGRG00001004144) #17 ENSCGRG00001011396 Enpp2 (ENSCGRG00001005486) #18 Ccn3 (ENSCGRG00001020090) #19 Mal2 (ENSCGRG00001020378) #20 Colec10 (ENSCGRG00001000745) #21 Tnfrsf11b (ENSCGRG00001002425) #22 ENSCGRG00001003587 Samd12 (ENSCGRG00001015660) #23 EXT1 (ENSCGRG00001017502) #25 Med30 (ENSCGRG00001017964) #26 Slc30a8 (ENSCGRG00001018604) Aard (ENSCGRG00001018995) Rad21 (ENSCGRG00001000050) #28 ENSCGRG00001013378 Utp23 (ENSCGRG00001005218) #29 Eif3h (ENSCGRG00001013118) #30 Trps1 (ENSCGRG00001015890) #31 ENSCGRG00001017800 #33 Csmd3 (ENSCGRG00001003870) #36 Kcnv1 (ENSCGRG00001000144) #37 ENSCGRG00001000584 Golden Hamster MODERN SPECIES 651 Colec10 (ENSMAUG00000018641) #21 Tnfrsf11b (ENSMAUG00000016782) #22 Samd12 (ENSMAUG00000001850) #23 Ext1 (ENSMAUG00000015069) #25 Med30 (ENSMAUG00000014534) #26 Slc30a8 (ENSMAUG00000015236) Rad21 (ENSMAUG00000000078) #28 Utp23 (ENSMAUG00000017455) #29 Eif3h (ENSMAUG00000018305) #30 ENSMAUG00000019278 #31 ENSMAUG00000005577 #33 Kcnv1 (ENSMAUG00000008386) #37 ENSMAUG00000000043 Sybu (ENSMAUG00000017804) ENSMAUG00000000245 Pkhd1l1 (ENSMAUG00000000463) Eny2 (ENSMAUG00000007674) Murinae ANCESTRAL SPECIES 10 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.e ENSGT00940000157594 ENSGT00390000011748 Mus ANCESTRAL SPECIES 11 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00940000165945 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00860000135745 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.e ENSGT00940000157594 Mus_A ANCESTRAL SPECIES 13 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00940000165945 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00860000135745 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.e ENSGT00940000157594 Mus_B ANCESTRAL SPECIES 12 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00940000165945 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00860000135745 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.e ENSGT00940000157594 Mouse MODERN SPECIES 6 Derl1 (ENSMUSG00000022365) #8 Zhx2 (ENSMUSG00000071757) #9 Slc22a22 (ENSMUSG00000022366) Has2 (ENSMUSG00000022367) #10 Sntb1 (ENSMUSG00000060429) #11 Mtbp (ENSMUSG00000022369) #12 Mrpl13 (ENSMUSG00000022370) #13 Col14a1 (ENSMUSG00000022371) #14 Deptor (ENSMUSG00000022419) #15 Dscc1 (ENSMUSG00000022422) #16 Taf2 (ENSMUSG00000037343) #17 Enpp2 (ENSMUSG00000022425) #18 Ccn3 (ENSMUSG00000037362) #19 Mal2 (ENSMUSG00000024479) #20 Colec10 (ENSMUSG00000038591) #21 Tnfrsf11b (ENSMUSG00000063727) #22 Samd12 (ENSMUSG00000058656) #23 Ext1 (ENSMUSG00000061731) #25 Med30 (ENSMUSG00000038622) #26 Slc30a8 (ENSMUSG00000022315) Aard (ENSMUSG00000068522) Rad21 (ENSMUSG00000022314) #28 Utp23 (ENSMUSG00000022313) #29 Eif3h (ENSMUSG00000022312) #30 Trps1 (ENSMUSG00000038679) #31 Csmd3 (ENSMUSG00000022311) #36 Kcnv1 (ENSMUSG00000022342) #37 Sybu (ENSMUSG00000022340) Ebag9 (ENSMUSG00000022339) ENSMUSG00000121576 Pkhd1l1 (ENSMUSG00000038725) Mus_C ANCESTRAL SPECIES 28 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00940000165945 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00860000135745 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040.e ENSGT00940000157594 Steppe mouse MODERN SPECIES 3153 Enpp2 (ENSMSIG00000022087) #18 Ccn3 (ENSMSIG00000022403) #19 Mal2 (ENSMSIG00000022419) #20 Colec10 (ENSMSIG00000022424) #21 Tnfrsf11b (ENSMSIG00000022442) #22 Samd12 (ENSMSIG00000022447) #23 ENSMSIG00000022453 ENSMSIG00000022466 Ext1 (ENSMSIG00000022468) #25 ENSMSIG00000022494 #26 spretus MODERN SPECIES 6 Zhx2 (MGP_SPRETEiJ_G0020701) #9 Slc22a22 (MGP_SPRETEiJ_G0020700) Has2 (MGP_SPRETEiJ_G0020699) #10 Sntb1 (MGP_SPRETEiJ_G0020698) #11 Mtbp (MGP_SPRETEiJ_G0020697) #12 Mrpl13 (MGP_SPRETEiJ_G0020696) #13 Col14a1 (MGP_SPRETEiJ_G0020695) #14 Deptor (MGP_SPRETEiJ_G0020694) #15 MGP_SPRETEiJ_G0020693 Dscc1 (MGP_SPRETEiJ_G0020692) #16 Taf2 (MGP_SPRETEiJ_G0020691) #17 Enpp2 (MGP_SPRETEiJ_G0020690) #18 Ccn3 (MGP_SPRETEiJ_G0020689) #19 Mal2 (MGP_SPRETEiJ_G0020688) #20 Colec10 (MGP_SPRETEiJ_G0020687) #21 Tnfrsf11b (MGP_SPRETEiJ_G0020686) #22 MGP_SPRETEiJ_G0020685 Samd12 (MGP_SPRETEiJ_G0020684) #23 Ext1 (MGP_SPRETEiJ_G0020683) #25 Med30 (MGP_SPRETEiJ_G0020682) #26 MGP_SPRETEiJ_G0020681 Aard (MGP_SPRETEiJ_G0020680) Rad21 (MGP_SPRETEiJ_G0020679) #28 Utp23 (MGP_SPRETEiJ_G0020678) #29 Eif3h (MGP_SPRETEiJ_G0020677) #30 Trps1 (MGP_SPRETEiJ_G0020676) #31 Csmd3 (MGP_SPRETEiJ_G0020675) #36 Kcnv1 (MGP_SPRETEiJ_G0020674) #37 Sybu (MGP_SPRETEiJ_G0020673) Ebag9 (MGP_SPRETEiJ_G0020672) Pkhd1l1 (MGP_SPRETEiJ_G0020671) Ryukyu mouse MODERN SPECIES 6 Zhx2 (MGP_CAROLIEiJ_G0019804) #9 Slc22a22 (MGP_CAROLIEiJ_G0019803) Has2 (MGP_CAROLIEiJ_G0019802) #10 MGP_CAROLIEiJ_G0019801 #11 Mtbp (MGP_CAROLIEiJ_G0019800) #12 Mrpl13 (MGP_CAROLIEiJ_G0019799) #13 Col14a1 (MGP_CAROLIEiJ_G0019798) #14 Deptor (MGP_CAROLIEiJ_G0019797) #15 MGP_CAROLIEiJ_G0019796 Dscc1 (MGP_CAROLIEiJ_G0019795) #16 Taf2 (MGP_CAROLIEiJ_G0019794) #17 Enpp2 (MGP_CAROLIEiJ_G0019793) #18 Ccn3 (MGP_CAROLIEiJ_G0019792) #19 Mal2 (MGP_CAROLIEiJ_G0019791) #20 Colec10 (MGP_CAROLIEiJ_G0019790) #21 Tnfrsf11b (MGP_CAROLIEiJ_G0019789) #22 MGP_CAROLIEiJ_G0019788 Samd12 (MGP_CAROLIEiJ_G0019787) #23 Ext1 (MGP_CAROLIEiJ_G0019786) #25 Med30 (MGP_CAROLIEiJ_G0019785) #26 MGP_CAROLIEiJ_G0019784 Aard (MGP_CAROLIEiJ_G0019783) Rad21 (MGP_CAROLIEiJ_G0019782) #28 Utp23 (MGP_CAROLIEiJ_G0019781) #29 Eif3h (MGP_CAROLIEiJ_G0019780) #30 Trps1 (MGP_CAROLIEiJ_G0019779) #31 Csmd3 (MGP_CAROLIEiJ_G0019778) #36 Kcnv1 (MGP_CAROLIEiJ_G0019777) #37 Sybu (MGP_CAROLIEiJ_G0019776) Ebag9 (MGP_CAROLIEiJ_G0019775) Pkhd1l1 (MGP_CAROLIEiJ_G0019774) Shrew mouse MODERN SPECIES 8 Zhx2 (MGP_PahariEiJ_G0019814) #9 Slc22a22 (MGP_PahariEiJ_G0019813) Has2 (MGP_PahariEiJ_G0019812) #10 Sntb1 (MGP_PahariEiJ_G0019811) #11 Mtbp (MGP_PahariEiJ_G0019810) #12 Mrpl13 (MGP_PahariEiJ_G0019809) #13 Col14a1 (MGP_PahariEiJ_G0019808) #14 Deptor (MGP_PahariEiJ_G0019807) #15 MGP_PahariEiJ_G0019806 Dscc1 (MGP_PahariEiJ_G0019805) #16 Taf2 (MGP_PahariEiJ_G0019804) #17 Enpp2 (MGP_PahariEiJ_G0019803) #18 Ccn3 (MGP_PahariEiJ_G0019802) #19 Mal2 (MGP_PahariEiJ_G0019801) #20 Colec10 (MGP_PahariEiJ_G0019800) #21 Tnfrsf11b (MGP_PahariEiJ_G0019799) #22 MGP_PahariEiJ_G0019798 Samd12 (MGP_PahariEiJ_G0019797) #23 Ext1 (MGP_PahariEiJ_G0019796) #25 Med30 (MGP_PahariEiJ_G0019795) #26 Slc30a8 (MGP_PahariEiJ_G0019794) Aard (MGP_PahariEiJ_G0019793) Rad21 (MGP_PahariEiJ_G0019792) #28 MGP_PahariEiJ_G0019791 Eif3h (MGP_PahariEiJ_G0019790) #30 Trps1 (MGP_PahariEiJ_G0019789) #31 MGP_PahariEiJ_G0019788 Csmd3 (MGP_PahariEiJ_G0019787) #36 Kcnv1 (MGP_PahariEiJ_G0019786) #37 Sybu (MGP_PahariEiJ_G0019785) Ebag9 (MGP_PahariEiJ_G0019784) Rat MODERN SPECIES 17 ENSRNOG00000069184 Has2 (ENSRNOG00000004854) #10 Sntb1 (ENSRNOG00000004821) #11 Mtbp (ENSRNOG00000004412) #12 Mrpl13 (ENSRNOG00000004401) #13 Col14a1 (ENSRNOG00000026415) #14 Deptor (ENSRNOG00000004328) #15 ENSRNOG00000069733 LOC100359421 (ENSRNOG00000032401) Dscc1 (ENSRNOG00000026502) #16 Taf2 (ENSRNOG00000034022) #17 Enpp2 (ENSRNOG00000004089) #18 Ccn3 (ENSRNOG00000008697) #19 Mal2 (ENSRNOG00000008615) #20 Colec10 (ENSRNOG00000008591) #21 Tnfrsf11b (ENSRNOG00000008336) #22 LOC120093654 (ENSRNOG00000013191) Samd12 (ENSRNOG00000043390) #23 Ext1 (ENSRNOG00000024886) #25 Med30 (ENSRNOG00000004844) #26 Slc30a8 (ENSRNOG00000004747) AABR07057877.1 (ENSRNOG00000028988) ENSRNOG00000067469 Aard (ENSRNOG00000004708) Rad21 (ENSRNOG00000004420) #28 Utp23 (ENSRNOG00000063314) #29 Eif3h (ENSRNOG00000004252) #30 Trps1 (ENSRNOG00000024998) #31 ENSRNOG00000069033 Csmd3 (ENSRNOG00000004937) #36 ENSRNOG00000065523 Upper Galilee mountains blind mole rat MODERN SPECIES 1022 Zhx2 (ENSNGAG00000012411) #9 Slc22a22 (ENSNGAG00000009950) Has2 (ENSNGAG00000013602) #10 ENSNGAG00000022494 Sntb1 (ENSNGAG00000017326) #11 Mtbp (ENSNGAG00000006793) #12 Mrpl13 (ENSNGAG00000024334) #13 Col14a1 (ENSNGAG00000024211) #14 Deptor (ENSNGAG00000014951) #15 Dscc1 (ENSNGAG00000023678) #16 Taf2 (ENSNGAG00000019427) #17 Enpp2 (ENSNGAG00000021370) #18 Ccn3 (ENSNGAG00000012632) #19 Mal2 (ENSNGAG00000024116) #20 Colec10 (ENSNGAG00000020596) #21 Tnfrsf11b (ENSNGAG00000023795) #22 ENSNGAG00000000730 #23 Ext1 (ENSNGAG00000020736) #25 Med30 (ENSNGAG00000023804) #26 Slc30a8 (ENSNGAG00000012419) Aard (ENSNGAG00000015627) Rad21 (ENSNGAG00000018620) #28 ENSNGAG00000004542 #29 Eif3h (ENSNGAG00000022147) #30 ENSNGAG00000008678 Trps1 (ENSNGAG00000001741) #31 Lesser Egyptian jerboa MODERN SPECIES 83 Slc22a22 (ENSJJAG00000019774) Has2 (ENSJJAG00000000159) #10 ENSJJAG00000000344 ENSJJAG00000000441 Sntb1 (ENSJJAG00000005003) #11 Mtbp (ENSJJAG00000011898) #12 Mrpl13 (ENSJJAG00000019308) #13 Col14a1 (ENSJJAG00000000842) #14 Deptor (ENSJJAG00000007358) #15 ENSJJAG00000011344 #16 Taf2 (ENSJJAG00000017199) #17 Enpp2 (ENSJJAG00000001919) #18 Ccn3 (ENSJJAG00000020730) #19 ENSJJAG00000017967 #20 Colec10 (ENSJJAG00000018490) #21 Tnfrsf11b (ENSJJAG00000019893) #22 Samd12 (ENSJJAG00000007485) #23 ENSJJAG00000009708 ENSJJAG00000019753 #25 Med30 (ENSJJAG00000022063) #26 Slc30a8 (ENSJJAG00000022484) ENSJJAG00000001121 ENSJJAG00000004609 Rad21 (ENSJJAG00000009491) #28 ENSJJAG00000009880 ENSJJAG00000012545 Eif3h (ENSJJAG00000016399) #30 Trps1 (ENSJJAG00000021617) #31 ENSJJAG00000009239 Csmd3 (ENSJJAG00000020031) #36 ENSJJAG00000014375 Kangaroo rat MODERN SPECIES 470 Derl1 (ENSDORG00000016557) #8 Zhx2 (ENSDORG00000014490) #9 Has2 (ENSDORG00000006059) #10 Sntb1 (ENSDORG00000029258) #11 Mtbp (ENSDORG00000013351) #12 ENSDORG00000023197 Mrpl13 (ENSDORG00000016654) #13 Col14a1 (ENSDORG00000016651) #14 Deptor (ENSDORG00000028412) #15 Dscc1 (ENSDORG00000011184) #16 Taf2 (ENSDORG00000011788) #17 Enpp2 (ENSDORG00000004750) #18 Ccn3 (ENSDORG00000008673) #19 Mal2 (ENSDORG00000023499) #20 Colec10 (ENSDORG00000004545) #21 Tnfrsf11b (ENSDORG00000026840) #22 Med30 (ENSDORG00000009874) #26 ENSDORG00000029035 Rad21 (ENSDORG00000005253) #28 ENSDORG00000005950 #29 ENSDORG00000029316 #29 Eif3h (ENSDORG00000005949) #30 Lagomorpha ANCESTRAL SPECIES 46 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.d ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Rabbit MODERN SPECIES 14 ENSOCUG00000038104 ENSOCUG00000032205 SNTB1 (ENSOCUG00000016211) #11 MTBP (ENSOCUG00000016195) #12 MRPL13 (ENSOCUG00000016189) #13 COL14A1 (ENSOCUG00000015234) #14 DEPTOR (ENSOCUG00000007642) #15 DSCC1 (ENSOCUG00000017952) #16 TAF2 (ENSOCUG00000017950) #17 ENSOCUG00000008938 ENPP2 (ENSOCUG00000013534) #18 CCN3 (ENSOCUG00000010693) #19 MAL2 (ENSOCUG00000025743) #20 ENSOCUG00000036160 COLEC10 (ENSOCUG00000024595) #21 TNFRSF11B (ENSOCUG00000011150) #22 SAMD12 (ENSOCUG00000009066) #23 EXT1 (ENSOCUG00000015191) #25 ENSOCUG00000033817 ENSOCUG00000038625 ENSOCUG00000032175 ENSOCUG00000038310 MED30 (ENSOCUG00000011890) #26 SLC30A8 (ENSOCUG00000008489) AARD (ENSOCUG00000025091) RAD21 (ENSOCUG00000002581) #28 ENSOCUG00000031575 UTP23 (ENSOCUG00000007541) #29 EIF3H (ENSOCUG00000007534) #30 ENSOCUG00000038288 ENSOCUG00000026750 Pika MODERN SPECIES 3674 COLEC10 (ENSOPRG00000008813) #21 TNFRSF11B (ENSOPRG00000008806) #22 SAMD12 (ENSOPRG00000008788) #23 Laurasiatheria ANCESTRAL SPECIES 18 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155167.b.b #22 Hedgehog MODERN SPECIES 12917 TNFRSF11B (ENSEEUG00000002591) #22 Common shrew MODERN SPECIES 12556 TNFRSF11B (ENSSARG00000005470) #22 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Suina ANCESTRAL SPECIES 26 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Chacoan peccary MODERN SPECIES 114 ZHX2 (ENSCWAG00000015481) #9 ENSCWAG00000015461 ENSCWAG00000015428 #10 HAS2 (ENSCWAG00000015390) #10 SNTB1 (ENSCWAG00000015327) #11 MTBP (ENSCWAG00000015155) #12 MRPL13 (ENSCWAG00000015112) #13 COL14A1 (ENSCWAG00000014836) #14 DEPTOR (ENSCWAG00000014662) #15 DSCC1 (ENSCWAG00000014558) #16 TAF2 (ENSCWAG00000014485) #17 ENPP2 (ENSCWAG00000013660) #18 CCN3 (ENSCWAG00000013537) #19 MAL2 (ENSCWAG00000013493) #20 COLEC10 (ENSCWAG00000013419) #21 TNFRSF11B (ENSCWAG00000013355) #22 SAMD12 (ENSCWAG00000013276) #23 EXT1 (ENSCWAG00000013172) #25 MED30 (ENSCWAG00000013119) #26 SLC30A8 (ENSCWAG00000012976) AARD (ENSCWAG00000012938) RAD21 (ENSCWAG00000012835) #28 UTP23 (ENSCWAG00000012797) #29 EIF3H (ENSCWAG00000012750) #30 TRPS1 (ENSCWAG00000012635) #31 CSMD3 (ENSCWAG00000010851) #36 KCNV1 (ENSCWAG00000010710) #37 SYBU (ENSCWAG00000010321) EBAG9 (ENSCWAG00000010267) PKHD1L1 (ENSCWAG00000009767) ENY2 (ENSCWAG00000009688) Pig MODERN SPECIES 12 HAS2 (ENSSSCG00000005992) #10 ENSSSCG00000013683 ENSSSCG00000049444 SNTB1 (ENSSSCG00000005994) #11 MTBP (ENSSSCG00000005995) #12 ENSSSCG00000051469 MRPL13 (ENSSSCG00000005996) #13 COL14A1 (ENSSSCG00000005997) #14 DEPTOR (ENSSSCG00000049630) #15 DSCC1 (ENSSSCG00000047247) #16 TAF2 (ENSSSCG00000006000) #17 ENPP2 (ENSSSCG00000006001) #18 CCN3 (ENSSSCG00000006002) #19 MAL2 (ENSSSCG00000006003) #20 COLEC10 (ENSSSCG00000029324) #21 TNFRSF11B (ENSSSCG00000027762) #22 SAMD12 (ENSSSCG00000036553) #23 EXT1 (ENSSSCG00000006009) #25 ENSSSCG00000006008 MED30 (ENSSSCG00000033577) #26 SLC30A8 (ENSSSCG00000006011) AARD (ENSSSCG00000006013) RAD21 (ENSSSCG00000006014) #28 UTP23 (ENSSSCG00000030493) #29 EIF3H (ENSSSCG00000006016) #30 TRPS1 (ENSSSCG00000006018) #31 CSMD3 (ENSSSCG00000031031) #36 ENSSSCG00000045117 ENSSSCG00000047194 KCNV1 (ENSSSCG00000006021) #37 SYBU (ENSSSCG00000006023) Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Cetacea ANCESTRAL SPECIES 17 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Odontoceti ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00950000185438 ENSGT00940000155549.b #36 ENSGT00950000182895.a.a.a.a.b ENSGT00940000159740 #37 ENSGT00940000165982 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514.f #20 ENSGT00940000159514.e #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00950000185438 ENSGT00940000155549.b #36 ENSGT00950000182895.a.a.a.a.b ENSGT00940000159740 #37 ENSGT00940000165982 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514.e #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00950000185438 ENSGT00940000155549.b #36 ENSGT00950000182895.a.a.a.a.b ENSGT00940000159740 #37 ENSGT00940000165982 Monodontidae ANCESTRAL SPECIES 20 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514.e #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00950000185438 ENSGT00940000155549.b #36 ENSGT00950000182895.a.a.a.a.b ENSGT00940000159740 #37 ENSGT00520000055634.a Beluga whale MODERN SPECIES 55 SNTB1 (ENSDLEG00000010982) #11 MTBP (ENSDLEG00000010940) #12 MRPL13 (ENSDLEG00000010887) #13 COL14A1 (ENSDLEG00000010612) #14 DEPTOR (ENSDLEG00000010538) #15 DSCC1 (ENSDLEG00000010516) #16 TAF2 (ENSDLEG00000010419) #17 ENPP2 (ENSDLEG00000010065) #18 NOV (ENSDLEG00000009992) #19 MAL2 (ENSDLEG00000009959) #20 TNFRSF11B (ENSDLEG00000009932) #22 COLEC10 (ENSDLEG00000009888) #21 ENSDLEG00000009857 SAMD12 (ENSDLEG00000009828) #23 ENSDLEG00000009819 #24 EXT1 (ENSDLEG00000009759) #25 MED30 (ENSDLEG00000009745) #26 SLC30A8 (ENSDLEG00000009731) AARD (ENSDLEG00000009719) RAD21 (ENSDLEG00000009626) #28 UTP23 (ENSDLEG00000009608) #29 EIF3H (ENSDLEG00000009556) #30 TRPS1 (ENSDLEG00000009523) #31 ENSDLEG00000009504 CSMD3 (ENSDLEG00000009010) #36 Narwhal MODERN SPECIES 300 DERL1 (ENSMMNG00015009742) #8 ZHX2 (ENSMMNG00015009763) #9 ENSMMNG00015009829 ENSMMNG00015009845 SNTB1 (ENSMMNG00015009861) #11 MTBP (ENSMMNG00015009876) #12 MRPL13 (ENSMMNG00015009896) #13 COL14A1 (ENSMMNG00015009928) #14 DEPTOR (ENSMMNG00015010025) #15 DSCC1 (ENSMMNG00015010076) #16 TAF2 (ENSMMNG00015010098) #17 ENPP2 (ENSMMNG00015010161) #18 CCN3 (ENSMMNG00015010239) #19 ENSMMNG00015010250 #20 COLEC10 (ENSMMNG00015010262) #21 TNFRSF11B (ENSMMNG00015010272) #22 SAMD12 (ENSMMNG00015010283) #23 ENSMMNG00015010297 EXT1 (ENSMMNG00015010321) #25 ENSMMNG00015010341 MED30 (ENSMMNG00015010355) #26 SLC30A8 (ENSMMNG00015010374) AARD (ENSMMNG00015010400) RAD21 (ENSMMNG00015010412) #28 UTP23 (ENSMMNG00015010441) #29 EIF3H (ENSMMNG00015010471) #30 TRPS1 (ENSMMNG00015010519) #31 ENSMMNG00015010545 CSMD3 (ENSMMNG00015010683) #36 ENSMMNG00015010996 KCNV1 (ENSMMNG00015011005) #37 Vaquita MODERN SPECIES 8 DERL1 (ENSPSNG00000011311) #8 ZHX2 (ENSPSNG00000011267) #9 ENSPSNG00000011144 #10 ENSPSNG00000011071 #10 SNTB1 (ENSPSNG00000010977) #11 MTBP (ENSPSNG00000010924) #12 MRPL13 (ENSPSNG00000010859) #13 COL14A1 (ENSPSNG00000009521) #14 DEPTOR (ENSPSNG00000009096) #15 DSCC1 (ENSPSNG00000009026) #16 TAF2 (ENSPSNG00000008838) #17 ENPP2 (ENSPSNG00000008163) #18 CCN3 (ENSPSNG00000008043) #19 MAL2 (ENSPSNG00000008002) #20 COLEC10 (ENSPSNG00000007960) #21 TNFRSF11B (ENSPSNG00000007923) #22 SAMD12 (ENSPSNG00000007740) #23 EXT1 (ENSPSNG00000007631) #25 MED30 (ENSPSNG00000007574) #26 SLC30A8 (ENSPSNG00000007461) AARD (ENSPSNG00000007427) RAD21 (ENSPSNG00000007330) #28 UTP23 (ENSPSNG00000007276) #29 EIF3H (ENSPSNG00000007183) #30 TRPS1 (ENSPSNG00000007084) #31 ENSPSNG00000007003 CSMD3 (ENSPSNG00000006105) #36 KCNV1 (ENSPSNG00000005798) #37 ENSPSNG00000005769 SYBU (ENSPSNG00000005652) ENSPSNG00000005584 Dolphin MODERN SPECIES 4161 TNFRSF11B (ENSTTRG00000000224) #22 Sperm whale MODERN SPECIES 6 TBC1D31 (ENSPCTG00005010115) #7 DERL1 (ENSPCTG00005010414) #8 ZHX2 (ENSPCTG00005010562) #9 HAS2 (ENSPCTG00005010593) #10 SNTB1 (ENSPCTG00005010666) #11 MTBP (ENSPCTG00005010776) #12 MRPL13 (ENSPCTG00005011031) #13 COL14A1 (ENSPCTG00005011110) #14 DEPTOR (ENSPCTG00005011300) #15 DSCC1 (ENSPCTG00005011456) #16 TAF2 (ENSPCTG00005011509) #17 ENPP2 (ENSPCTG00005011693) #18 CCN3 (ENSPCTG00005012587) #19 MAL2 (ENSPCTG00005012632) #20 COLEC10 (ENSPCTG00005012679) #21 TNFRSF11B (ENSPCTG00005012744) #22 SAMD12 (ENSPCTG00005012788) #23 ENSPCTG00005012813 EXT1 (ENSPCTG00005012850) #25 ENSPCTG00005012974 ENSPCTG00005013026 MED30 (ENSPCTG00005013078) #26 SLC30A8 (ENSPCTG00005013149) AARD (ENSPCTG00005013378) RAD21 (ENSPCTG00005013451) #28 UTP23 (ENSPCTG00005013642) #29 EIF3H (ENSPCTG00005013684) #30 TRPS1 (ENSPCTG00005013931) #31 ENSPCTG00005014104 CSMD3 (ENSPCTG00005014261) #36 ENSPCTG00005016715 Blue whale MODERN SPECIES 8 ZHX2 (ENSBMSG00010020062) #9 ENSBMSG00010020076 ENSBMSG00010012170 #10 HAS2 (ENSBMSG00010012186) #10 SNTB1 (ENSBMSG00010012216) #11 MTBP (ENSBMSG00010012237) #12 MRPL13 (ENSBMSG00010012277) #13 COL14A1 (ENSBMSG00010012305) #14 DEPTOR (ENSBMSG00010012348) #15 DSCC1 (ENSBMSG00010012372) #16 TAF2 (ENSBMSG00010012391) #17 ENPP2 (ENSBMSG00010012456) #18 CCN3 (ENSBMSG00010012598) #19 MAL2 (ENSBMSG00010012618) #20 COLEC10 (ENSBMSG00010012637) #21 TNFRSF11B (ENSBMSG00010012652) #22 SAMD12 (ENSBMSG00010012660) #23 ENSBMSG00010012678 ENSBMSG00010012685 EXT1 (ENSBMSG00010012696) #25 ENSBMSG00010012705 MED30 (ENSBMSG00010012718) #26 SLC30A8 (ENSBMSG00010012732) AARD (ENSBMSG00010012752) RAD21 (ENSBMSG00010012772) #28 UTP23 (ENSBMSG00010012823) #29 EIF3H (ENSBMSG00010012850) #30 TRPS1 (ENSBMSG00010012894) #31 ENSBMSG00010012938 CSMD3 (ENSBMSG00010013044) #36 ENSBMSG00010013249 Pecora ANCESTRAL SPECIES 20 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Percora_a ANCESTRAL SPECIES 23 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Bovidae ANCESTRAL SPECIES 22 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Caprinae ANCESTRAL SPECIES 18 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Goat MODERN SPECIES 5 STMN2 (ENSCHIG00000014257) HEY1 (ENSCHIG00000021515) MRPS28 (ENSCHIG00000018727) TPD52 (ENSCHIG00000016090) ZBTB10 (ENSCHIG00000008950) ZNF704 (ENSCHIG00000009329) PAG1 (ENSCHIG00000005882) ENSCHIG00000022058 PMP2 (ENSCHIG00000017466) FABP9 (ENSCHIG00000013859) FABP4 (ENSCHIG00000008262) FABP12 (ENSCHIG00000023180) CCN3 (ENSCHIG00000020448) #19 MAL2 (ENSCHIG00000017255) #20 COLEC10 (ENSCHIG00000014341) #21 TNFRSF11B (ENSCHIG00000024689) #22 SAMD12 (ENSCHIG00000021598) #23 ENSCHIG00000019617 #24 EXT1 (ENSCHIG00000009348) #25 MED30 (ENSCHIG00000009165) #26 SLC30A8 (ENSCHIG00000024278) RAD21 (ENSCHIG00000010634) #28 UTP23 (ENSCHIG00000019828) #29 EIF3H (ENSCHIG00000011690) #30 TRPS1 (ENSCHIG00000015490) #31 CSMD3 (ENSCHIG00000012588) #36 KCNV1 (ENSCHIG00000023606) #37 ENSCHIG00000006323 SYBU (ENSCHIG00000026780) ENSCHIG00000012764 PKHD1L1 (ENSCHIG00000011818) Rambouillet Sheep MODERN SPECIES 25 ENSOARG00020016227 #19 STMN2 (ENSOARG00020016309) HEY1 (ENSOARG00020016436) MRPS28 (ENSOARG00020016516) ZBTB10 (ENSOARG00020016760) ENSOARG00020017111 ZNF704 (ENSOARG00020017158) PAG1 (ENSOARG00020017273) ENSOARG00020017413 PMP2 (ENSOARG00020017455) FABP9 (ENSOARG00020017569) FABP4 (ENSOARG00020017607) FABP12 (ENSOARG00020017651) ENSOARG00020017690 #19 MAL2 (ENSOARG00020017762) #20 TNFRSF11B (ENSOARG00020017854) #22 SAMD12 (ENSOARG00020009911) #23 ENSOARG00020009933 EXT1 (ENSOARG00020010039) #25 MED30 (ENSOARG00020010301) #26 SLC30A8 (ENSOARG00020010375) AARD (ENSOARG00020010505) RAD21 (ENSOARG00020010557) #28 UTP23 (ENSOARG00020010775) #29 EIF3H (ENSOARG00020010821) #30 TRPS1 (ENSOARG00020010945) #31 CSMD3 (ENSOARG00020011306) #36 KCNV1 (ENSOARG00020013118) #37 ENSOARG00020013155 SYBU (ENSOARG00020013212) EBAG9 (ENSOARG00020013511) Bovinae ANCESTRAL SPECIES 18 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Bos ANCESTRAL SPECIES 21 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Bos_a ANCESTRAL SPECIES 42 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00390000016884.c.b ENSGT00940000157893 #31 ENSGT00940000162286.a.a.e.b.b.b.a.b ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Domestic yak MODERN SPECIES 9 HEY1 (ENSBGRG00000017930) MRPS28 (ENSBGRG00000018011) ENSBGRG00000018076 TPD52 (ENSBGRG00000018118) ZBTB10 (ENSBGRG00000018559) ENSBGRG00000018803 ZNF704 (ENSBGRG00000018852) PAG1 (ENSBGRG00000019051) FABP5 (ENSBGRG00000019123) PMP2 (ENSBGRG00000019143) ENSBGRG00000019316 FABP12 (ENSBGRG00000019436) CCN3 (ENSBGRG00000019494) #19 MAL2 (ENSBGRG00000019542) #20 COLEC10 (ENSBGRG00000019671) #21 TNFRSF11B (ENSBGRG00000019748) #22 ENSBGRG00000019880 #23 EXT1 (ENSBGRG00000020244) #25 MED30 (ENSBGRG00000020358) #26 SLC30A8 (ENSBGRG00000003818) AARD (ENSBGRG00000003909) RAD21 (ENSBGRG00000003952) #28 UTP23 (ENSBGRG00000004032) #29 EIF3H (ENSBGRG00000004195) #30 ENSBGRG00000004421 TRPS1 (ENSBGRG00000004435) #31 ENSBGRG00000004496 ENSBGRG00000004508 CSMD3 (ENSBGRG00000004553) #36 KCNV1 (ENSBGRG00000004644) #37 ENSBGRG00000004673 Wild yak MODERN SPECIES 890 fabp5 (ENSBMUG00000016662) PMP2 (ENSBMUG00000016645) fabp9 (ENSBMUG00000016614) FABP4 (ENSBMUG00000016600) FABP12 (ENSBMUG00000016581) CCN3 (ENSBMUG00000016568) #19 MAL2 (ENSBMUG00000016551) #20 COLEC10 (ENSBMUG00000016512) #21 TNFRSF11B (ENSBMUG00000016492) #22 SAMD12 (ENSBMUG00000016479) #23 EXT1 (ENSBMUG00000016434) #25 MED30 (ENSBMUG00000016425) #26 SLC30A8 (ENSBMUG00000016390) RAD21 (ENSBMUG00000016370) #28 UTP23 (ENSBMUG00000016346) #29 EIF3H (ENSBMUG00000016307) #30 ENSBMUG00000016275 ENSBMUG00000016251 TRPS1 (ENSBMUG00000016228) #31 Bos_b ANCESTRAL SPECIES 25 ENSGT00940000157068 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00960000190605 ENSGT00940000156172.b.c ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Cow MODERN SPECIES 5 HEY1 (ENSBTAG00000015717) MRPS28 (ENSBTAG00000001302) TPD52 (ENSBTAG00000007335) ZBTB10 (ENSBTAG00000003339) ENSBTAG00000053020 ZNF704 (ENSBTAG00000021743) PAG1 (ENSBTAG00000014026) FABP5 (ENSBTAG00000047330) PMP2 (ENSBTAG00000000071) FABP9 (ENSBTAG00000039718) FABP4 (ENSBTAG00000037526) FABP12 (ENSBTAG00000047661) CCN3 (ENSBTAG00000002080) #19 MAL2 (ENSBTAG00000011779) #20 COLEC10 (ENSBTAG00000054331) #21 TNFRSF11B (ENSBTAG00000007423) #22 SAMD12 (ENSBTAG00000043996) #23 EXT1 (ENSBTAG00000006209) #25 MED30 (ENSBTAG00000026254) #26 SLC30A8 (ENSBTAG00000052098) AARD (ENSBTAG00000032738) RAD21 (ENSBTAG00000007303) #28 UTP23 (ENSBTAG00000040422) #29 EIF3H (ENSBTAG00000014032) #30 TRPS1 (ENSBTAG00000017694) #31 ENSBTAG00000055102 CSMD3 (ENSBTAG00000039068) CSMD3 (ENSBTAG00000038281) #36 KCNV1 (ENSBTAG00000008512) #37 ENSBTAG00000021747 SYBU (ENSBTAG00000032548) Hybrid Bos Indicus MODERN SPECIES 5 STMN2 (ENSBIXG00005017543) HEY1 (ENSBIXG00005017496) MRPS28 (ENSBIXG00005017444) TPD52 (ENSBIXG00005017399) ZBTB10 (ENSBIXG00005017084) ENSBIXG00005016921 PAG1 (ENSBIXG00005016895) FABP5 (ENSBIXG00005005727) PMP2 (ENSBIXG00005002728) FABP4 (ENSBIXG00005016838) FABP12 (ENSBIXG00005005844) CCN3 (ENSBIXG00005005725) #19 ENSBIXG00005007553 MAL2 (ENSBIXG00005016758) #20 COLEC10 (ENSBIXG00005016710) #21 TNFRSF11B (ENSBIXG00005002697) #22 SAMD12 (ENSBIXG00005002679) #23 EXT1 (ENSBIXG00005016564) #25 MED30 (ENSBIXG00005007032) #26 SLC30A8 (ENSBIXG00005005646) AARD (ENSBIXG00005016474) RAD21 (ENSBIXG00005016455) #28 UTP23 (ENSBIXG00005016393) #29 EIF3H (ENSBIXG00005016338) #30 ENSBIXG00005007509 ENSBIXG00005016230 TRPS1 (ENSBIXG00005016207) #31 ENSBIXG00005016148 CSMD3 (ENSBIXG00005000145) #36 KCNV1 (ENSBIXG00005015543) #37 ENSBIXG00005002307 American bison MODERN SPECIES 3348 HEY1 (ENSBBBG00000014643) MRPS28 (ENSBBBG00000014627) TPD52 (ENSBBBG00000014613) ZBTB10 (ENSBBBG00000008117) ENSBBBG00000003419 ZNF704 (ENSBBBG00000003412) PAG1 (ENSBBBG00000014548) FABP5 (ENSBBBG00000014539) PMP2 (ENSBBBG00000003395) FABP9 (ENSBBBG00000014524) FABP4 (ENSBBBG00000014522) FABP12 (ENSBBBG00000003386) CCN3 (ENSBBBG00000014514) #19 MAL2 (ENSBBBG00000014509) #20 COLEC10 (ENSBBBG00000014496) #21 TNFRSF11B (ENSBBBG00000014488) #22 SAMD12 (ENSBBBG00000014480) #23 EXT1 (ENSBBBG00000014464) #25 MED30 (ENSBBBG00000014457) #26 SLC30A8 (ENSBBBG00000003333) RAD21 (ENSBBBG00000014426) #28 UTP23 (ENSBBBG00000003315) #29 EIF3H (ENSBBBG00000001410) #30 TRPS1 (ENSBBBG00000003292) #31 CSMD3 (ENSBBBG00000014342) #36 KCNV1 (ENSBBBG00000009111) #37 ENSBBBG00000014138 SYBU (ENSBBBG00000014133) EBAG9 (ENSBBBG00000014126) PKHD1L1 (ENSBBBG00000014115) ENY2 (ENSBBBG00000014060) Siberian musk deer MODERN SPECIES 179 STMN2 (ENSMMSG00000009102) HEY1 (ENSMMSG00000009080) MRPS28 (ENSMMSG00000009043) TPD52 (ENSMMSG00000008296) ZBTB10 (ENSMMSG00000008194) ZNF704 (ENSMMSG00000008169) PAG1 (ENSMMSG00000008150) ENSMMSG00000008129 FABP9 (ENSMMSG00000008067) FABP4 (ENSMMSG00000008031) FABP12 (ENSMMSG00000008001) CCN3 (ENSMMSG00000007984) #19 ENSMMSG00000007955 MAL2 (ENSMMSG00000007920) #20 COLEC10 (ENSMMSG00000007878) #21 TNFRSF11B (ENSMMSG00000007849) #22 SAMD12 (ENSMMSG00000007826) #23 EXT1 (ENSMMSG00000007765) #25 MED30 (ENSMMSG00000007736) #26 SLC30A8 (ENSMMSG00000007650) AARD (ENSMMSG00000007612) RAD21 (ENSMMSG00000007551) #28 UTP23 (ENSMMSG00000007483) #29 EIF3H (ENSMMSG00000007419) #30 TRPS1 (ENSMMSG00000007290) #31 ENSMMSG00000007227 #36 Yarkand deer MODERN SPECIES 13 MRPS28 (ENSCHYG00000011656) TPD52 (ENSCHYG00000011705) ZBTB10 (ENSCHYG00000011967) ZNF704 (ENSCHYG00000012170) ENSCHYG00000012254 PAG1 (ENSCHYG00000012288) FABP5 (ENSCHYG00000012376) PMP2 (ENSCHYG00000012498) FABP4 (ENSCHYG00000012700) FABP12 (ENSCHYG00000012751) ENSCHYG00000012791 CCN3 (ENSCHYG00000012809) #19 ENSCHYG00000012846 MAL2 (ENSCHYG00000010704) #20 COLEC10 (ENSCHYG00000010753) #21 TNFRSF11B (ENSCHYG00000010791) #22 SAMD12 (ENSCHYG00000010858) #23 EXT1 (ENSCHYG00000010986) #25 MED30 (ENSCHYG00000011099) #26 ENSCHYG00000011245 SLC30A8 (ENSCHYG00000011262) ENSCHYG00000011317 AARD (ENSCHYG00000011332) RAD21 (ENSCHYG00000011361) #28 UTP23 (ENSCHYG00000011492) #29 ENSCHYG00000011644 #30 ENSCHYG00000011720 ENSCHYG00000011748 TRPS1 (ENSCHYG00000011789) #31 ENSCHYG00000011892 ENSCHYG00000011945 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Arabian camel MODERN SPECIES 17 FAM83A (ENSCDRG00005021868) TBC1D31 (ENSCDRG00005021862) #7 DERL1 (ENSCDRG00005021860) #8 ZHX2 (ENSCDRG00005021859) #9 HAS2 (ENSCDRG00005021856) #10 SNTB1 (ENSCDRG00005021855) #11 MTBP (ENSCDRG00005021854) #12 MRPL13 (ENSCDRG00005021852) #13 COL14A1 (ENSCDRG00005021849) #14 DEPTOR (ENSCDRG00005021847) #15 DSCC1 (ENSCDRG00005021845) #16 TAF2 (ENSCDRG00005021835) #17 CCN3 (ENSCDRG00005021825) #19 MAL2 (ENSCDRG00005021822) #20 COLEC10 (ENSCDRG00005021812) #21 TNFRSF11B (ENSCDRG00005021806) #22 SAMD12 (ENSCDRG00005021800) #23 EXT1 (ENSCDRG00005021794) #25 MED30 (ENSCDRG00005021791) #26 SLC30A8 (ENSCDRG00005021786) RAD21 (ENSCDRG00005021778) #28 UTP23 (ENSCDRG00005021773) #29 ENSCDRG00005021769 EIF3H (ENSCDRG00005021763) #30 TRPS1 (ENSCDRG00005021761) #31 CSMD3 (ENSCDRG00005021527) #36 KCNV1 (ENSCDRG00005021422) #37 SYBU (ENSCDRG00005021365) EBAG9 (ENSCDRG00005021349) PKHD1L1 (ENSCDRG00005021263) ENY2 (ENSCDRG00005021203) Alpaca MODERN SPECIES 1609 SNTB1 (ENSVPAG00000000777) #11 MTBP (ENSVPAG00000000775) #12 MRPL13 (ENSVPAG00000000774) #13 COL14A1 (ENSVPAG00000000773) #14 DEPTOR (ENSVPAG00000000772) #15 DSCC1 (ENSVPAG00000000770) #16 TAF2 (ENSVPAG00000000766) #17 ENPP2 (ENSVPAG00000000765) #18 CCN3 (ENSVPAG00000000764) #19 MAL2 (ENSVPAG00000000763) #20 COLEC10 (ENSVPAG00000000762) #21 TNFRSF11B (ENSVPAG00000000761) #22 SAMD12 (ENSVPAG00000000759) #23 EXT1 (ENSVPAG00000000758) #25 MED30 (ENSVPAG00000000757) #26 Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Chiroptera ANCESTRAL SPECIES 27 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Microchiroptera ANCESTRAL SPECIES 27 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00630000090989 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Greater horseshoe bat MODERN SPECIES 5 TBC1D31 (ENSRFEG00010012805) #7 DERL1 (ENSRFEG00010012689) #8 ZHX2 (ENSRFEG00010012663) #9 HAS2 (ENSRFEG00010012610) #10 SNTB1 (ENSRFEG00010012578) #11 MTBP (ENSRFEG00010012541) #12 MRPL13 (ENSRFEG00010012491) #13 COL14A1 (ENSRFEG00010010684) #14 DEPTOR (ENSRFEG00010010428) #15 DSCC1 (ENSRFEG00010010374) #16 TAF2 (ENSRFEG00010010250) #17 ENPP2 (ENSRFEG00010010040) #18 CCN3 (ENSRFEG00010009972) #19 MAL2 (ENSRFEG00010009943) #20 COLEC10 (ENSRFEG00010009890) #21 TNFRSF11B (ENSRFEG00010009857) #22 SAMD12 (ENSRFEG00010009797) #23 EXT1 (ENSRFEG00010009689) #25 MED30 (ENSRFEG00010009632) #26 SLC30A8 (ENSRFEG00010009520) ENSRFEG00010009502 RAD21 (ENSRFEG00010009395) #28 UTP23 (ENSRFEG00010009377) #29 EIF3H (ENSRFEG00010009285) #30 TRPS1 (ENSRFEG00010009152) #31 ENSRFEG00010009074 ENSRFEG00010009030 CSMD3 (ENSRFEG00010008293) #36 ENSRFEG00010008229 KCNV1 (ENSRFEG00010008190) #37 SYBU (ENSRFEG00010007878) Microbat MODERN SPECIES 954 ENSMLUG00000024427 HAS2 (ENSMLUG00000006858) #10 SNTB1 (ENSMLUG00000009812) #11 MTBP (ENSMLUG00000009773) #12 MRPL13 (ENSMLUG00000009756) #13 ENSMLUG00000022827 COL14A1 (ENSMLUG00000009662) #14 DEPTOR (ENSMLUG00000009641) #15 DSCC1 (ENSMLUG00000009970) #16 TAF2 (ENSMLUG00000009579) #17 ENPP2 (ENSMLUG00000006285) #18 CCN3 (ENSMLUG00000006279) #19 ENSMLUG00000030522 MAL2 (ENSMLUG00000006274) #20 COLEC10 (ENSMLUG00000002946) #21 TNFRSF11B (ENSMLUG00000002940) #22 SAMD12 (ENSMLUG00000002603) #23 EXT1 (ENSMLUG00000002596) #25 MED30 (ENSMLUG00000002592) #26 SLC30A8 (ENSMLUG00000002588) ENSMLUG00000030664 RAD21 (ENSMLUG00000006449) #28 UTP23 (ENSMLUG00000004345) #29 ENSMLUG00000030518 ENSMLUG00000025058 EIF3H (ENSMLUG00000002028) #30 TRPS1 (ENSMLUG00000001813) #31 ENSMLUG00000029874 CSMD3 (ENSMLUG00000012541) #36 ENSMLUG00000027673 KCNV1 (ENSMLUG00000003316) #37 Megabat MODERN SPECIES 5819 TNFRSF11B (ENSPVAG00000011015) #22 Equus ANCESTRAL SPECIES 14 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00970000197358 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515.o #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT01090000263317.b ENSGT00500000044870.b.a.a ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 Donkey MODERN SPECIES 3 ZHX2 (ENSEASG00005022601) #9 HAS2 (ENSEASG00005032828) #10 ENSEASG00005034851 SNTB1 (ENSEASG00005022604) #11 MTBP (ENSEASG00005022606) #12 ENSEASG00005038685 MRPL13 (ENSEASG00005028414) #13 COL14A1 (ENSEASG00005022695) #14 DEPTOR (ENSEASG00005022899) #15 DSCC1 (ENSEASG00005022903) #16 TAF2 (ENSEASG00005022933) #17 ENPP2 (ENSEASG00005023034) #18 CCN3 (ENSEASG00005023121) #19 MAL2 (ENSEASG00005023122) #20 COLEC10 (ENSEASG00005026881) #21 ENSEASG00005023128 #22 ENSEASG00005001196 DPYS (ENSEASG00005001202) DCSTAMP (ENSEASG00005001208) RIMS2 (ENSEASG00005001223) DCAF13 (ENSEASG00005001266) SLC25A32 (ENSEASG00005001280) CTHRC1 (ENSEASG00005001285) FZD6 (ENSEASG00005001288) BAALC (ENSEASG00005001295) ATP6V1C1 (ENSEASG00005001297) ENSEASG00005001302 AZIN1 (ENSEASG00005001310) KLF10 (ENSEASG00005001410) ODF1 (ENSEASG00005001414) UBR5 (ENSEASG00005001629) Horse MODERN SPECIES 30 HAS2 (ENSECAG00000021206) #10 ENSECAG00000057814 ENSECAG00000028121 SNTB1 (ENSECAG00000017294) #11 MRPL13 (ENSECAG00000021161) #13 MTBP (ENSECAG00000000235) #12 COL14A1 (ENSECAG00000009462) #14 DEPTOR (ENSECAG00000021363) #15 DSCC1 (ENSECAG00000015641) #16 TAF2 (ENSECAG00000024333) #17 ENPP2 (ENSECAG00000003776) #18 ENSECAG00000057655 CCN3 (ENSECAG00000023039) #19 MAL2 (ENSECAG00000022537) #20 COLEC10 (ENSECAG00000018266) #21 TNFRSF11B (ENSECAG00000014916) #22 ENSECAG00000056676 SAMD12 (ENSECAG00000012962) #23 EXT1 (ENSECAG00000023112) #25 MED30 (ENSECAG00000022303) #26 SLC30A8 (ENSECAG00000017475) RAD21 (ENSECAG00000016392) #28 UTP23 (ENSECAG00000026844) #29 EIF3H (ENSECAG00000022019) #30 EIF3H (ENSECAG00000050664) #30 TRPS1 (ENSECAG00000017249) #31 CSMD3 (ENSECAG00000043734) #36 ENSECAG00000052272 ENSECAG00000029464 ENSECAG00000044309 KCNV1 (ENSECAG00000019378) #37 Carnivora ANCESTRAL SPECIES 22 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Caniformia ANCESTRAL SPECIES 23 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Caniformia_b ANCESTRAL SPECIES 22 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 Ursidae ANCESTRAL SPECIES 26 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515.n #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Ursus ANCESTRAL SPECIES 46 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515.n #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Polar bear MODERN SPECIES 157 DERL1 (ENSUMAG00000021965) #8 ZHX2 (ENSUMAG00000021964) #9 ENSUMAG00000021958 HAS2 (ENSUMAG00000021951) #10 SNTB1 (ENSUMAG00000021946) #11 MTBP (ENSUMAG00000021940) #12 MRPL13 (ENSUMAG00000021939) #13 COL14A1 (ENSUMAG00000021437) #14 DEPTOR (ENSUMAG00000021329) #15 DSCC1 (ENSUMAG00000021323) #16 TAF2 (ENSUMAG00000020862) #17 ENPP2 (ENSUMAG00000020711) #18 CCN3 (ENSUMAG00000020705) #19 MAL2 (ENSUMAG00000020702) #20 COLEC10 (ENSUMAG00000020700) #21 TNFRSF11B (ENSUMAG00000020695) #22 SAMD12 (ENSUMAG00000020677) #23 ENSUMAG00000020673 #24 EXT1 (ENSUMAG00000020518) #25 MED30 (ENSUMAG00000020487) #26 SLC30A8 (ENSUMAG00000020456) RAD21 (ENSUMAG00000020442) #28 UTP23 (ENSUMAG00000020439) #29 EIF3H (ENSUMAG00000020436) #30 TRPS1 (ENSUMAG00000020423) #31 CSMD3 (ENSUMAG00000020351) #36 KCNV1 (ENSUMAG00000020300) #37 SYBU (ENSUMAG00000020286) EBAG9 (ENSUMAG00000020279) PKHD1L1 (ENSUMAG00000020105) ENY2 (ENSUMAG00000020072) American black bear MODERN SPECIES 1062 TNFRSF11B (ENSUAMG00000019801) #22 Giant Panda MODERN SPECIES 19 ENSAMEG00000029645 #9 ZHX2 (ENSAMEG00000029062) #9 HAS2 (ENSAMEG00000008288) #10 ENSAMEG00000031306 SNTB1 (ENSAMEG00000027317) #11 MTBP (ENSAMEG00000002231) #12 MRPL13 (ENSAMEG00000002225) #13 COL14A1 (ENSAMEG00000002184) #14 DEPTOR (ENSAMEG00000002174) #15 DSCC1 (ENSAMEG00000002148) #16 TAF2 (ENSAMEG00000004158) #17 ENPP2 (ENSAMEG00000004213) #18 CCN3 (ENSAMEG00000004343) #19 MAL2 (ENSAMEG00000028146) #20 COLEC10 (ENSAMEG00000000398) #21 TNFRSF11B (ENSAMEG00000002611) #22 SAMD12 (ENSAMEG00000002609) #23 EXT1 (ENSAMEG00000002597) #25 MED30 (ENSAMEG00000011024) #26 SLC30A8 (ENSAMEG00000001617) RAD21 (ENSAMEG00000001648) #28 UTP23 (ENSAMEG00000010317) #29 EIF3H (ENSAMEG00000010322) #30 TRPS1 (ENSAMEG00000011636) #31 CSMD3 (ENSAMEG00000006646) #36 KCNV1 (ENSAMEG00000026413) #37 ENSAMEG00000025060 SYBU (ENSAMEG00000029679) EBAG9 (ENSAMEG00000006190) PKHD1L1 (ENSAMEG00000012900) ENSAMEG00000028670 Mustelinae ANCESTRAL SPECIES 68 ENSGT00940000153859.b #7 ENSGT00940000167006 ENSGT00530000063156.b #8 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 Ferret MODERN SPECIES 172 TBC1D31 (ENSMPUG00000001135) #7 DERL1 (ENSMPUG00000001132) #8 HAS2 (ENSMPUG00000001124) #10 ENSMPUG00000018552 SNTB1 (ENSMPUG00000001118) #11 MTBP (ENSMPUG00000001098) #12 MRPL13 (ENSMPUG00000001080) #13 COL14A1 (ENSMPUG00000001076) #14 DEPTOR (ENSMPUG00000001074) #15 DSCC1 (ENSMPUG00000001049) #16 TAF2 (ENSMPUG00000001041) #17 ENPP2 (ENSMPUG00000001034) #18 CCN3 (ENSMPUG00000001033) #19 MAL2 (ENSMPUG00000001031) #20 COLEC10 (ENSMPUG00000001028) #21 TNFRSF11B (ENSMPUG00000001026) #22 SAMD12 (ENSMPUG00000001022) #23 EXT1 (ENSMPUG00000000994) #25 ENSMPUG00000000993 MED30 (ENSMPUG00000000992) #26 SLC30A8 (ENSMPUG00000000990) RAD21 (ENSMPUG00000000988) #28 UTP23 (ENSMPUG00000000987) #29 EIF3H (ENSMPUG00000000982) #30 TRPS1 (ENSMPUG00000000980) #31 ENSMPUG00000000977 ENSMPUG00000000969 ENSMPUG00000000968 CSMD3 (ENSMPUG00000000954) #36 American mink MODERN SPECIES 152 TBC1D31 (ENSNVIG00000005647) #7 ENSNVIG00000005760 DERL1 (ENSNVIG00000005788) #8 HAS2 (ENSNVIG00000005875) #10 SNTB1 (ENSNVIG00000005896) #11 MTBP (ENSNVIG00000005908) #12 MRPL13 (ENSNVIG00000005948) #13 COL14A1 (ENSNVIG00000005962) #14 DEPTOR (ENSNVIG00000006358) #15 DSCC1 (ENSNVIG00000006389) #16 TAF2 (ENSNVIG00000006402) #17 ENPP2 (ENSNVIG00000006454) #18 CCN3 (ENSNVIG00000006649) #19 MAL2 (ENSNVIG00000006659) #20 COLEC10 (ENSNVIG00000006685) #21 TR11B (ENSNVIG00000006701) #22 B8ZZB7 (ENSNVIG00000006729) #23 EXT1 (ENSNVIG00000006760) #25 MED30 (ENSNVIG00000006778) #26 SLC30A8 (ENSNVIG00000006791) ENSNVIG00000006829 RAD21 (ENSNVIG00000006840) #28 UTP23 (ENSNVIG00000006883) #29 EIF3H (ENSNVIG00000006908) #30 TRPS1 (ENSNVIG00000006947) #31 Canidae ANCESTRAL SPECIES 33 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00970000197358 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748.j.b Canis_lupus ANCESTRAL SPECIES 19 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00970000197358 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00940000157482.d.f ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00910000148652 #24 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00910000144211.n.b.c ENSGT00940000157893 #31 ENSGT00950000183087.B ENSGT00940000155549.b #36 ENSGT00950000183010.a.a.a.b.a.a.a.a.b ENSGT00940000159740 #37 ENSGT00940000155935.h Dingo MODERN SPECIES 88 MTBP (ENSCAFG00020005809) #12 MRPL13 (ENSCAFG00020005790) #13 ENSCAFG00020005624 #14 ENSCAFG00020005489 #14 DEPTOR (ENSCAFG00020005480) #15 ENSCAFG00020005452 DSCC1 (ENSCAFG00020005411) #16 ENSCAFG00020005402 TAF2 (ENSCAFG00020004477) #17 ENPP2 (ENSCAFG00020004366) #18 CCN3 (ENSCAFG00020004358) #19 ENSCAFG00020004355 MAL2 (ENSCAFG00020004351) #20 COLEC10 (ENSCAFG00020004344) #21 ENSCAFG00020004342 TNFRSF11B (ENSCAFG00020004337) #22 SAMD12 (ENSCAFG00020004321) #23 ENSCAFG00020004283 #24 EXT1 (ENSCAFG00020004235) #25 MED30 (ENSCAFG00020004225) #26 SLC30A8 (ENSCAFG00020004204) RAD21 (ENSCAFG00020004189) #28 UTP23 (ENSCAFG00020004174) #29 EIF3H (ENSCAFG00020004169) #30 ENSCAFG00020004144 TRPS1 (ENSCAFG00020004107) #31 ENSCAFG00020004080 ENSCAFG00020004048 ENSCAFG00020004032 CSMD3 (ENSCAFG00020003854) #36 ENSCAFG00020003786 Dog MODERN SPECIES 4 ENSCAFG00845008557 SNTB1 (ENSCAFG00845008497) #11 MTBP (ENSCAFG00845008381) #12 MRPL13 (ENSCAFG00845008306) #13 COL14A1 (ENSCAFG00845007662) #14 DEPTOR (ENSCAFG00845007215) #15 ENSCAFG00845007121 DSCC1 (ENSCAFG00845007041) #16 ENSCAFG00845006985 TAF2 (ENSCAFG00845006764) #17 ENPP2 (ENSCAFG00845005953) #18 CCN3 (ENSCAFG00845005703) #19 MAL2 (ENSCAFG00845005680) #20 COLEC10 (ENSCAFG00845005655) #21 ENSCAFG00845005645 TNFRSF11B (ENSCAFG00845005623) #22 SAMD12 (ENSCAFG00845014607) #23 EXT1 (ENSCAFG00845014539) #25 MED30 (ENSCAFG00845014503) #26 SLC30A8 (ENSCAFG00845014466) ENSCAFG00845014379 RAD21 (ENSCAFG00845014331) #28 UTP23 (ENSCAFG00845014281) #29 EIF3H (ENSCAFG00845014234) #30 ENSCAFG00845014190 ENSCAFG00845014182 ENSCAFG00845014166 TRPS1 (ENSCAFG00845014104) #31 ENSCAFG00845014042 CSMD3 (ENSCAFG00845013880) #36 ENSCAFG00845013806 Red fox MODERN SPECIES 13 DERL1 (ENSVVUG00000016143) #8 HAS2 (ENSVVUG00000016131) #10 ENSVVUG00000016117 ENSVVUG00000016111 SNTB1 (ENSVVUG00000016109) #11 MTBP (ENSVVUG00000016074) #12 MRPL13 (ENSVVUG00000016056) #13 COL14A1 (ENSVVUG00000015993) #14 DEPTOR (ENSVVUG00000015978) #15 DSCC1 (ENSVVUG00000015957) #16 TAF2 (ENSVVUG00000015909) #17 ENPP2 (ENSVVUG00000015843) #18 NOV (ENSVVUG00000015831) #19 MAL2 (ENSVVUG00000015814) #20 COLEC10 (ENSVVUG00000015807) #21 TNFRSF11B (ENSVVUG00000015804) #22 SAMD12 (ENSVVUG00000015742) #23 ENSVVUG00000015717 #24 EXT1 (ENSVVUG00000015398) #25 MED30 (ENSVVUG00000015389) #26 SLC30A8 (ENSVVUG00000015316) RAD21 (ENSVVUG00000015308) #28 UTP23 (ENSVVUG00000015307) #29 EIF3H (ENSVVUG00000015306) #30 TRPS1 (ENSVVUG00000015285) #31 ENSVVUG00000015254 CSMD3 (ENSVVUG00000014360) #36 ENSVVUG00000014211 ENSVVUG00000014191 ENSVVUG00000014180 ENSVVUG00000014158 Felidae ANCESTRAL SPECIES 22 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Panthera ANCESTRAL SPECIES 16 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Tiger MODERN SPECIES 59 HAS2 (ENSPTIG00000005214) #10 SNTB1 (ENSPTIG00000000330) #11 MTBP (ENSPTIG00000021927) #12 MRPL13 (ENSPTIG00000021819) #13 ENSPTIG00000017406 #14 ENSPTIG00000013675 #14 DEPTOR (ENSPTIG00000012342) #15 DSCC1 (ENSPTIG00000011632) #16 TAF2 (ENSPTIG00000009218) #17 ENPP2 (ENSPTIG00000015615) #18 CCN3 (ENSPTIG00000013703) #19 MAL2 (ENSPTIG00000012927) #20 COLEC10 (ENSPTIG00000012236) #21 TNFRSF11B (ENSPTIG00000011541) #22 SAMD12 (ENSPTIG00000010558) #23 EXT1 (ENSPTIG00000009060) #25 MED30 (ENSPTIG00000008078) #26 SLC30A8 (ENSPTIG00000006598) RAD21 (ENSPTIG00000020923) #28 ENSPTIG00000020266 UTP23 (ENSPTIG00000019925) #29 EIF3H (ENSPTIG00000017858) #30 TRPS1 (ENSPTIG00000017329) #31 REXO2 (ENSPTIG00000015578) RBM7 (ENSPTIG00000013512) C11orf71 (ENSPTIG00000012663) ENSPTIG00000012078 ENSPTIG00000011550 NNMT (ENSPTIG00000011224) Panthera_a ANCESTRAL SPECIES 16 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 lion MODERN SPECIES 509 ENSPLOG00000004974 ZHX2 (ENSPLOG00000004981) #9 HAS2 (ENSPLOG00000004992) #10 SNTB1 (ENSPLOG00000005013) #11 MTBP (ENSPLOG00000005046) #12 MRPL13 (ENSPLOG00000005086) #13 COL14A1 (ENSPLOG00000005151) #14 DEPTOR (ENSPLOG00000005212) #15 DSCC1 (ENSPLOG00000005232) #16 TAF2 (ENSPLOG00000005247) #17 ENPP2 (ENSPLOG00000005318) #18 ENSPLOG00000005473 CCN3 (ENSPLOG00000005493) #19 MAL2 (ENSPLOG00000005517) #20 COLEC10 (ENSPLOG00000005543) #21 TNFRSF11B (ENSPLOG00000005575) #22 SAMD12 (ENSPLOG00000005597) #23 EXT1 (ENSPLOG00000005628) #25 MED30 (ENSPLOG00000005660) #26 SLC30A8 (ENSPLOG00000005688) RAD21 (ENSPLOG00000005735) #28 UTP23 (ENSPLOG00000005780) #29 EIF3H (ENSPLOG00000005830) #30 TRPS1 (ENSPLOG00000005900) #31 CSMD3 (ENSPLOG00000006169) #36 KCNV1 (ENSPLOG00000006865) #37 SYBU (ENSPLOG00000006906) EBAG9 (ENSPLOG00000007001) PKHD1L1 (ENSPLOG00000007053) ENY2 (ENSPLOG00000007239) NUDCD1 (ENSPLOG00000007264) leopard MODERN SPECIES 34 ENSPPRG00000024779 ZHX2 (ENSPPRG00000019439) #9 HAS2 (ENSPPRG00000024783) #10 SNTB1 (ENSPPRG00000024791) #11 MTBP (ENSPPRG00000024799) #12 MRPL13 (ENSPPRG00000024807) #13 ENSPPRG00000024812 #14 ENSPPRG00000024829 #14 DEPTOR (ENSPPRG00000024837) #15 DSCC1 (ENSPPRG00000024843) #16 TAF2 (ENSPPRG00000024848) #17 ENPP2 (ENSPPRG00000024856) #18 CCN3 (ENSPPRG00000024868) #19 MAL2 (ENSPPRG00000024870) #20 COLEC10 (ENSPPRG00000024879) #21 TNFRSF11B (ENSPPRG00000024881) #22 SAMD12 (ENSPPRG00000024883) #23 EXT1 (ENSPPRG00000024885) #25 MED30 (ENSPPRG00000024892) #26 SLC30A8 (ENSPPRG00000024895) RAD21 (ENSPPRG00000024897) #28 ENSPPRG00000024901 UTP23 (ENSPPRG00000024902) #29 EIF3H (ENSPPRG00000024911) #30 TRPS1 (ENSPPRG00000024926) #31 Cat MODERN SPECIES 249 DERL1 (ENSFCAG00000030653) #8 ENSFCAG00000047753 ZHX2 (ENSFCAG00000026338) #9 HAS2 (ENSFCAG00000037155) #10 SNTB1 (ENSFCAG00000046126) #11 MTBP (ENSFCAG00000024130) #12 MRPL13 (ENSFCAG00000001463) #13 COL14A1 (ENSFCAG00000001462) #14 DEPTOR (ENSFCAG00000010947) #15 DSCC1 (ENSFCAG00000010944) #16 TAF2 (ENSFCAG00000030848) #17 ENPP2 (ENSFCAG00000010937) #18 CCN3 (ENSFCAG00000030696) #19 MAL2 (ENSFCAG00000014187) #20 COLEC10 (ENSFCAG00000038585) #21 TNFRSF11B (ENSFCAG00000001880) #22 SAMD12 (ENSFCAG00000039716) #23 EXT1 (ENSFCAG00000042984) #25 MED30 (ENSFCAG00000025335) #26 SLC30A8 (ENSFCAG00000007087) RAD21 (ENSFCAG00000013473) #28 UTP23 (ENSFCAG00000036051) #29 EIF3H (ENSFCAG00000014831) #30 TRPS1 (ENSFCAG00000013890) #31 CSMD3 (ENSFCAG00000031602) #36 KCNV1 (ENSFCAG00000024822) #37 SYBU (ENSFCAG00000031166) EBAG9 (ENSFCAG00000025490) PKHD1L1 (ENSFCAG00000023829) ENY2 (ENSFCAG00000030489) NUDCD1 (ENSFCAG00000008501) Atlantogenata ANCESTRAL SPECIES 20 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.c.a ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 Afrotheria ANCESTRAL SPECIES 10 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.c.a ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Afrotheria_a ANCESTRAL SPECIES 10 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00940000157004.a.a.c.a ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00390000007815 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Elephant MODERN SPECIES 567 DERL1 (ENSLAFG00000009020) #8 ZHX2 (ENSLAFG00000009019) #9 ENSLAFG00000029374 HAS2 (ENSLAFG00000001028) #10 ENSLAFG00000013001 #11 MTBP (ENSLAFG00000012989) #12 MRPL13 (ENSLAFG00000012985) #13 COL14A1 (ENSLAFG00000012970) #14 DEPTOR (ENSLAFG00000012963) #15 DSCC1 (ENSLAFG00000013202) #16 TAF2 (ENSLAFG00000013191) #17 ENPP2 (ENSLAFG00000017681) #18 CCN3 (ENSLAFG00000005136) #19 MAL2 (ENSLAFG00000005133) #20 COLEC10 (ENSLAFG00000005130) #21 TNFRSF11B (ENSLAFG00000002069) #22 EXT1 (ENSLAFG00000028847) #25 MED30 (ENSLAFG00000002551) #26 SLC30A8 (ENSLAFG00000006391) AARD (ENSLAFG00000000793) RAD21 (ENSLAFG00000002810) #28 UTP23 (ENSLAFG00000001282) #29 ENSLAFG00000013103 #30 TRPS1 (ENSLAFG00000001260) #31 CSMD3 (ENSLAFG00000001459) #36 KCNV1 (ENSLAFG00000009264) #37 SYBU (ENSLAFG00000007844) EBAG9 (ENSLAFG00000007842) PKHD1L1 (ENSLAFG00000007823) ENY2 (ENSLAFG00000003282) NUDCD1 (ENSLAFG00000013430) Hyrax MODERN SPECIES 12034 TNFRSF11B (ENSPCAG00000013026) #22 Tenrec MODERN SPECIES 5707 TNFRSF11B (ENSETEG00000005681) #22 Xenarthra ANCESTRAL SPECIES 350 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 Sloth MODERN SPECIES 5219 TNFRSF11B (ENSCHOG00000013370) #22 Armadillo MODERN SPECIES 4194 SNTB1 (ENSDNOG00000010265) #11 MTBP (ENSDNOG00000008935) #12 MRPL13 (ENSDNOG00000046226) #13 COL14A1 (ENSDNOG00000008826) #14 DEPTOR (ENSDNOG00000015660) #15 DSCC1 (ENSDNOG00000015659) #16 ENSDNOG00000045965 ENSDNOG00000031944 TAF2 (ENSDNOG00000012454) #17 ENPP2 (ENSDNOG00000005336) #18 ENSDNOG00000049643 CCN3 (ENSDNOG00000010419) #19 ENSDNOG00000048916 MAL2 (ENSDNOG00000043237) #20 COLEC10 (ENSDNOG00000041711) #21 TNFRSF11B (ENSDNOG00000000935) #22 SAMD12 (ENSDNOG00000044433) #23 Platypus MODERN SPECIES 15 CRB1 (ENSOANG00000012013) ZBTB41 (ENSOANG00000008986) ASPM (ENSOANG00000011184) F13B (ENSOANG00000011183) ENSOANG00000040033 ENSOANG00000032965 COL14A1 (ENSOANG00000045971) #14 DEPTOR (ENSOANG00000020439) #15 DSCC1 (ENSOANG00000038552) #16 TAF2 (ENSOANG00000007240) #17 ENPP2 (ENSOANG00000020134) #18 ENSOANG00000037076 #19 MAL2 (ENSOANG00000036238) #20 COLEC10 (ENSOANG00000021094) #21 ENSOANG00000050659 TNFRSF11B (ENSOANG00000009644) #22 SAMD12 (ENSOANG00000004272) #23 EXT1 (ENSOANG00000012897) #25 MED30 (ENSOANG00000047620) #26 ENSOANG00000042824 RAD21 (ENSOANG00000004879) #28 UTP23 (ENSOANG00000004878) #29 EIF3H (ENSOANG00000004874) #30 TRPS1 (ENSOANG00000008749) #31 CSMD3 (ENSOANG00000009560) #36 KCNV1 (ENSOANG00000008841) #37 SYBU (ENSOANG00000007367) EBAG9 (ENSOANG00000007368) PKHD1L1 (ENSOANG00000008098) ENY2 (ENSOANG00000008097) NUDCD1 (ENSOANG00000008096) Anura ANCESTRAL SPECIES 10 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000159740 #37 ENSGT00520000055634.a ENSGT00390000004040 ENSGT00940000157594 ENSGT00390000011748 ENSGT00390000007776 Frog MODERN SPECIES 6 has2 (ENSXETG00000006863) #10 ENSXETG00000048202 sntb1 (ENSXETG00000005757) #11 mrpl13 (ENSXETG00000025658) #13 alox15b (ENSXETG00000005761) #14 deptor (ENSXETG00000005764) #15 dscc1 (ENSXETG00000003126) #16 mtbp (ENSXETG00000003129) #12 taf2 (ENSXETG00000003130) #17 enpp2 (ENSXETG00000003134) #18 ccn3 (ENSXETG00000003135) #19 ENSXETG00000041369 trpv4l.1 (ENSXETG00000032501) mal2 (ENSXETG00000047456) #20 colec10 (ENSXETG00000003141) #21 tnfrsf11b (ENSXETG00000003142) #22 samd12 (ENSXETG00000040913) #23 ext1 (ENSXETG00000019136) #25 med30 (ENSXETG00000020788) #26 slc30a8 (ENSXETG00000027945) rad21 (ENSXETG00000020783) #28 utp23 (ENSXETG00000020781) #29 eif3h (ENSXETG00000007407) #30 trps1 (ENSXETG00000016286) #31 csmd3 (ENSXETG00000025787) #36 ENSXETG00000039051 kcnv1 (ENSXETG00000007921) #37 sybu (ENSXETG00000018016) ebag9 (ENSXETG00000018015) ENSXETG00000042449 pkhd1l1.1 (ENSXETG00000042385) Leishan spiny toad MODERN SPECIES 8 SNTB1 (ENSLLEG00000011455) #11 MTBP (ENSLLEG00000011171) #12 MRPL13 (ENSLLEG00000011088) #13 ENSLLEG00000011061 COL14A1 (ENSLLEG00000010684) #14 ENSLLEG00000010649 DEPTOR (ENSLLEG00000010482) #15 DSCC1 (ENSLLEG00000010356) #16 TAF2 (ENSLLEG00000009855) #17 ENPP2 (ENSLLEG00000008761) #18 ENSLLEG00000008717 CCN3 (ENSLLEG00000008662) #19 MAL2 (ENSLLEG00000008525) #20 COLEC10 (ENSLLEG00000008460) #21 ENSLLEG00000008432 TNFRSF11B (ENSLLEG00000008335) #22 SAMD12 (ENSLLEG00000008106) #23 ENSLLEG00000008057 EXT1 (ENSLLEG00000007984) #25 ENSLLEG00000007929 #26 ENSLLEG00000007898 SLC30A8 (ENSLLEG00000007833) RAD21 (ENSLLEG00000007721) #28 ENSLLEG00000007710 ENSLLEG00000007702 UTP23 (ENSLLEG00000007679) #29 ENSLLEG00000007662 EIF3H (ENSLLEG00000007441) #30 ENSLLEG00000007392 ENSLLEG00000007383 ENSLLEG00000007366 Coelacanth MODERN SPECIES 2394 TNFRSF11B (ENSLACG00000006043) #22 ENSLACG00000022549 ##22 ENSLACG00000004872 ENSLACG00000004824 Actinopterygii ANCESTRAL SPECIES 88 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT01030000235077 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Neopterygii ANCESTRAL SPECIES 23 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00940000153769.F.m #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00950000183156.a.b.b.b.b.a ENSGT00390000005809 ENSGT00960000187692 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802 ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b ENSGT00940000159377 Osteoglossocephalai ANCESTRAL SPECIES 44 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00940000153769.F.m #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000158596.a.a ENSGT00940000161198 ENSGT00940000160429.h.a Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 20 ENSGT00390000011435 ENSGT00940000160768 ENSGT00940000153859.b #7 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.c #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A.n #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.c #22 ENSGT00940000155167.b.a.b.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.a ENSGT00390000005809 Asian bonytongue MODERN SPECIES 9 FAM83A (ENSSFOG00015031348) TBC1D31 (ENSSFOG00015005517) #7 ENSSFOG00015005317 has2 (ENSSFOG00015005287) #10 sntb1 (ENSSFOG00015005250) #11 MTBP (ENSSFOG00015005181) #12 mrpl13 (ENSSFOG00015005149) #13 COL14A1 (ENSSFOG00015005012) #14 deptor (ENSSFOG00015004956) #15 dscc1 (ENSSFOG00015004911) #16 taf2 (ENSSFOG00015004791) #17 ENPP2 (ENSSFOG00015004691) #18 CCN3 (ENSSFOG00015004662) #19 mal2 (ENSSFOG00015004637) #20 si:ch211-93i7.4 (ENSSFOG00015004621) #21 TNFRSF11B (ENSSFOG00015004616) #22 ENSSFOG00015004556 ##22 CARMIL1 (ENSSFOG00015004303) scgn (ENSSFOG00015004218) MTSS1 (ENSSFOG00015004132) ndufb9 (ENSSFOG00015027706) TMEM65 (ENSSFOG00015033091) mboat1 (ENSSFOG00015025225) ENSSFOG00015004019 CDKAL1 (ENSSFOG00015004003) ENSSFOG00015003934 nrsn1 (ENSSFOG00015024787) ENSSFOG00015003896 slc6a3 (ENSSFOG00015003829) LPCAT1 (ENSSFOG00015003762) irx4a (ENSSFOG00015003670) P. kingsleyae MODERN SPECIES 1 zgc:101716 (ENSPKIG00000018559) FAM83A (ENSPKIG00000018626) TBC1D31 (ENSPKIG00000018687) #7 zhx2a (ENSPKIG00000018756) #9 ENSPKIG00000018765 has2 (ENSPKIG00000018776) #10 sntb1 (ENSPKIG00000018798) #11 MTBP (ENSPKIG00000018833) #12 mrpl13 (ENSPKIG00000018874) #13 COL14A1 (ENSPKIG00000018918) #14 deptor (ENSPKIG00000019001) #15 dscc1 (ENSPKIG00000019054) #16 taf2 (ENSPKIG00000019134) #17 ENPP2 (ENSPKIG00000019314) #18 CCN3 (ENSPKIG00000019464) #19 ENSPKIG00000019637 #22 mal2 (ENSPKIG00000019681) #20 si:ch211-93i7.4 (ENSPKIG00000019699) #21 ENSPKIG00000019723 ##22 ENSPKIG00000019750 ENSPKIG00000019782 CARMIL1 (ENSPKIG00000019813) scgn (ENSPKIG00000019887) MTSS1 (ENSPKIG00000019920) ndufb9 (ENSPKIG00000019952) rnf139 (ENSPKIG00000019977) TMEM65 (ENSPKIG00000020023) mboat1 (ENSPKIG00000020096) ENSPKIG00000020122 CDKAL1 (ENSPKIG00000020135) sox4b (ENSPKIG00000020154) Osteoglossiformes ANCESTRAL SPECIES 165 ENSGT00910000144277 ENSGT00390000014398 ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.d #15 ENSGT00940000155778.A.m #18 ENSGT00940000156034.b ENSGT00940000155167.b.b.d #22 ENSGT00940000155167.b.a.b.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.b ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a P. kingsleyae MODERN SPECIES 104 lrp12 (ENSPKIG00000025594) ZFPM2 (ENSPKIG00000025607) oxr1b (ENSPKIG00000025595) ENSPKIG00000025596 rnf144b (ENSPKIG00000025604) sdha (ENSPKIG00000024753) psma2b (ENSPKIG00000024738) wdyhv1 (ENSPKIG00000024731) ZHX1 (ENSPKIG00000024726) ##9 derl1 (ENSPKIG00000024714) #8 ZHX2 (ENSPKIG00000024705) #9 COL14A1 (ENSPKIG00000024680) #14 deptor (ENSPKIG00000024652) #15 ENPP2 (ENSPKIG00000024612) #18 ENSPKIG00000024511 ENSPKIG00000024462 #22 ENSPKIG00000024447 ##22 CARMIL1 (ENSPKIG00000024396) SCGN (ENSPKIG00000024357) MTSS1 (ENSPKIG00000024344) tatdn1 (ENSPKIG00000024331) rnf139 (ENSPKIG00000024320) tmem65 (ENSPKIG00000024302) ENSPKIG00000024291 e2f3 (ENSPKIG00000024283) ENSPKIG00000024276 sox4a (ENSPKIG00000024271) nrsn1l (ENSPKIG00000024262) mrpl36 (ENSPKIG00000024258) ndufs6 (ENSPKIG00000024253) irx4b (ENSPKIG00000024240) Asian bonytongue MODERN SPECIES 15 tpm3 (ENSSFOG00015019143) ENSSFOG00015019119 ssr2 (ENSSFOG00015019095) msto1 (ENSSFOG00015019076) ENSSFOG00015019023 pdia7 (ENSSFOG00015018989) sdha (ENSSFOG00015018938) psma2b (ENSSFOG00015026284) wdyhv1 (ENSSFOG00015018923) ZHX1 (ENSSFOG00015018886) ##9 derl1 (ENSSFOG00015000474) #8 ZHX2 (ENSSFOG00015024975) #9 COL14A1 (ENSSFOG00015000554) #14 ENPP2 (ENSSFOG00015000561) #18 ENSSFOG00015000567 ENSSFOG00015000986 #22 ENSSFOG00015000990 ##22 CARMIL1 (ENSSFOG00015001001) SCGN (ENSSFOG00015001097) MTSS1 (ENSSFOG00015001122) tatdn1 (ENSSFOG00015001193) rnf139 (ENSSFOG00015025836) tmem65 (ENSSFOG00015030564) srfbp1 (ENSSFOG00015001274) e2f3 (ENSSFOG00015001281) sox4a (ENSSFOG00015025792) nrsn1l (ENSSFOG00015029000) lpcat1 (ENSSFOG00015001378) mrpl36 (ENSSFOG00015001447) ndufs6 (ENSSFOG00015001469) irx4b (ENSSFOG00015001487) Clupeocephala ANCESTRAL SPECIES 24 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000158596.a.a Otomorpha ANCESTRAL SPECIES 161 ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00940000157621 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000158596.a.a Clupeiformes ANCESTRAL SPECIES 83 ENSGT00940000157068.d ENSGT00940000164547.b.b ENSGT00940000157621 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00530000063085.A.a ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT00390000004428.a.a ENSGT00390000007463 ENSGT00940000161116.w.a ENSGT00390000017548.b.a ENSGT00940000156691 ENSGT00390000003070.a.a ENSGT00940000160116.b ENSGT00950000183157.a.a.a.a ENSGT00390000011615.A.a Atlantic herring MODERN SPECIES HEY1 (ENSCHAG00000009967) ENSCHAG00000009942 ENSCHAG00000009934 ANKIB1 (ENSCHAG00000009889) has2 (ENSCHAG00000009866) #10 sntb1 (ENSCHAG00000009846) #11 MTBP (ENSCHAG00000009815) #12 mrpl13 (ENSCHAG00000009796) #13 COL14A1 (ENSCHAG00000008314) #14 deptor (ENSCHAG00000008201) #15 dscc1 (ENSCHAG00000008126) #16 taf2 (ENSCHAG00000005735) #17 enpp2 (ENSCHAG00000003581) ##18 CCN3 (ENSCHAG00000003088) #19 ENSCHAG00000002997 #21 TNFRSF11B (ENSCHAG00000002978) #22 ENSCHAG00000002964 ##22 CARMIL1 (ENSCHAG00000000278) scgn (ENSCHAG00000000098) ENSCHAG00000000093 MTSS1 (ENSCHAG00000000088) TMEM65 (ENSCHAG00000000084) zgc:112148 (ENSCHAG00000000080) ENSCHAG00000000077 ENSCHAG00000027564 USH1G (ENSCHAG00000027562) OTOP2 (ENSCHAG00000027557) HID1 (ENSCHAG00000027551) ENSCHAG00000027547 fscn2a (ENSCHAG00000027545) ENSCHAG00000027544 Denticle herring MODERN SPECIES 17 ANKIB1 (ENSDCDG00000021109) has2 (ENSDCDG00000021114) #10 sntb1 (ENSDCDG00000021117) #11 MTBP (ENSDCDG00000021125) #12 mrpl13 (ENSDCDG00000021151) #13 COL14A1 (ENSDCDG00000021256) #14 deptor (ENSDCDG00000025350) #15 dscc1 (ENSDCDG00000025364) #16 taf2 (ENSDCDG00000025419) #17 enpp2 (ENSDCDG00000026782) ##18 CCN3 (ENSDCDG00000029036) #19 ENSDCDG00000029038 ENSDCDG00000029039 mal2 (ENSDCDG00000029044) #20 si:ch211-93i7.4 (ENSDCDG00000029046) #21 TNFRSF11B (ENSDCDG00000029049) #22 ENSDCDG00000029054 ##22 CARMIL1 (ENSDCDG00000005468) scgn (ENSDCDG00000013341) ENSDCDG00000013364 MTSS1 (ENSDCDG00000013394) TMEM65 (ENSDCDG00000013466) zgc:112148 (ENSDCDG00000013485) ENSDCDG00000013498 ENSDCDG00000013508 USH1G (ENSDCDG00000013514) OTOP2 (ENSDCDG00000013529) HID1 (ENSDCDG00000013564) ENSDCDG00000013640 fscn2a (ENSDCDG00000013684) birc5a (ENSDCDG00000013687) Otophysi ANCESTRAL SPECIES 58 ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00940000161470.a.b.d ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 Characiphysae ANCESTRAL SPECIES 49 ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00500000044904.a.b.i.b ENSGT00940000155952 ENSGT00940000161470.a.b.d ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000158596.a.a Channel catfish MODERN SPECIES rbp5 (ENSIPUG00000000053) PTPN6 (ENSIPUG00000000054) ENSIPUG00000000055 ENSIPUG00000000056 ENSIPUG00000000057 wnt4b (ENSIPUG00000000059) phc1 (ENSIPUG00000000060) rps9 (ENSIPUG00000000061) ENSIPUG00000000062 ENSIPUG00000000063 ENSIPUG00000000064 rbfox1l (ENSIPUG00000000065) CCN3 (ENSIPUG00000000066) #19 MAL2 (ENSIPUG00000000067) #20 si:ch211-93i7.4 (ENSIPUG00000000068) #21 TNFRSF11B (ENSIPUG00000000069) #22 ENSIPUG00000000070 ##22 CARMIL1 (ENSIPUG00000000071) scgn (ENSIPUG00000000072) MTSS1 (ENSIPUG00000000073) ENSIPUG00000000074 TMEM65 (ENSIPUG00000000075) ENSIPUG00000000076 ENSIPUG00000000077 Mboat1 (ENSIPUG00000000078) e2f3 (ENSIPUG00000000079) ENSIPUG00000000080 ENSIPUG00000000081 ENSIPUG00000000082 ENSIPUG00000000083 cdkal1 (ENSIPUG00000000084) Characiphysae_b ANCESTRAL SPECIES 99 ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00500000044904.a.b.i.b Characoidei ANCESTRAL SPECIES 60 ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00390000018360.a ENSGT00940000156893 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000162635.ob ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00500000044904.a.b.i.b Red-bellied piranha MODERN SPECIES 70 CCR8 (ENSPNAG00000012062) ENSPNAG00000002082 ENSPNAG00000012018 DNAH5 (ENSPNAG00000001933) ADCY2 (ENSPNAG00000001857) TENT4A (ENSPNAG00000011603) ice1 (ENSPNAG00000001809) prpf3 (ENSPNAG00000001799) ENSPNAG00000001758 ca14 (ENSPNAG00000001753) taf2 (ENSPNAG00000001742) #17 enpp2 (ENSPNAG00000001739) ##18 CCN3 (ENSPNAG00000011433) #19 mal2 (ENSPNAG00000011425) #20 si:ch211-93i7.4 (ENSPNAG00000011397) #21 TNFRSF11B (ENSPNAG00000011418) #22 ENSPNAG00000001714 CARMIL1 (ENSPNAG00000011382) scgn (ENSPNAG00000001675) MTSS1 (ENSPNAG00000011302) TMEM65 (ENSPNAG00000011182) mboat1 (ENSPNAG00000001569) E2F3 (ENSPNAG00000001565) ENSPNAG00000011130 ENSPNAG00000011126 ENSPNAG00000011121 Mexicana tetra MODERN SPECIES 2 ENSAMXG00000040867 ENSAMXG00000007530 DNAH5 (ENSAMXG00000007429) ENSAMXG00000038886 ADCY2 (ENSAMXG00000038314) TENT4A (ENSAMXG00000039964) ice1 (ENSAMXG00000042159) prpf3 (ENSAMXG00000007306) ENSAMXG00000038153 ca14 (ENSAMXG00000036060) taf2 (ENSAMXG00000007296) #17 enpp2 (ENSAMXG00000007268) ##18 CCN3 (ENSAMXG00000035188) #19 mal2 (ENSAMXG00000040616) #20 si:ch211-93i7.4 (ENSAMXG00000033176) #21 TNFRSF11B (ENSAMXG00000035635) #22 ENSAMXG00000040250 CARMIL1 (ENSAMXG00000007246) scgn (ENSAMXG00000037361) ENSAMXG00000035390 ENSAMXG00000025195 ENSAMXG00000007229 ENSAMXG00000037939 zgc:112185 (ENSAMXG00000007222) anks3 (ENSAMXG00000007218) wdr24 (ENSAMXG00000007215) zgc:112496 (ENSAMXG00000040622) rhbdl1 (ENSAMXG00000007206) h1-0 (ENSAMXG00000025194) rhot2 (ENSAMXG00000007201) ENSAMXG00000035156 Electric eel MODERN SPECIES 543 CCN3 (ENSEEEG00000001102) #19 mal2 (ENSEEEG00000001103) #20 si:ch211-93i7.4 (ENSEEEG00000001105) #21 TNFRSF11B (ENSEEEG00000001111) #22 ENSEEEG00000001115 ##22 CARMIL1 (ENSEEEG00000001127) scgn (ENSEEEG00000001129) MTSS1 (ENSEEEG00000001130) TMEM65 (ENSEEEG00000001131) mboat1 (ENSEEEG00000001132) ENSEEEG00000001137 ENSEEEG00000001138 ENSEEEG00000001139 Cyprinoidei ANCESTRAL SPECIES 86 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00390000018360.a ENSGT00940000157873.c ENSGT00390000018878 ENSGT00940000156893 ENSGT00390000002049.d ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006.m ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000155167.b.b.e #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155167.b.b.e #22 Golden-line barbel MODERN SPECIES 544 ENSSGRG00000047354 #22 ENSSGRG00000047349 ENSSGRG00000047345 ENSSGRG00000047342 ENSSGRG00000047340 ENSSGRG00000047339 ENSSGRG00000047338 syn2a (ENSSGRG00000047285) raf1a (ENSSGRG00000047253) cnbpa (ENSSGRG00000047240) ENSSGRG00000047239 IQSEC1 (ENSSGRG00000047089) NUP210 (ENSSGRG00000046975) WNT7A (ENSSGRG00000046963) zgc:171857 (ENSSGRG00000046962) ENSSGRG00000046961 Common carp reference MODERN SPECIES 47 cobl (ENSCCRG00000022649) ENSCCRG00000028569 ENSCCRG00000018516 ENSCCRG00000037038 ENSCCRG00000058089 ENSCCRG00000027486 ENSCCRG00000060732 ENSCCRG00000004176 ENSCCRG00000054903 prpf3 (ENSCCRG00000028229) ca14 (ENSCCRG00000073224) ENSCCRG00000000786 ENSCCRG00000065962 ENSCCRG00000021581 #17 ENSCCRG00000059401 #20 ENSCCRG00000032799 #22 ENSCCRG00000070793 CDKAL1 (ENSCCRG00000078434) sox4b (ENSCCRG00000064749) ENSCCRG00000055302 ENSCCRG00000009226 nrsn1 (ENSCCRG00000063262) DCDC2 (ENSCCRG00000074477) slc6a3 (ENSCCRG00000047356) ENSCCRG00000048451 irx4a (ENSCCRG00000032313) irx2a (ENSCCRG00000032425) irx1a (ENSCCRG00000077893) ADAMTS16 (ENSCCRG00000017200) ENSCCRG00000079149 ENSCCRG00000021769 Cyprininae ANCESTRAL SPECIES 295 ENSGT00940000153979.B.a ENSGT00390000012959.b.g ENSGT00390000006983.a.b.a ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l ENSGT00940000171486.A.c ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a ENSGT01030000234564.a.a.a.a.a ENSGT00940000159514.j #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.f #22 ENSGT00940000155167.b.a.a ##22 Cyprininae_a ANCESTRAL SPECIES 244 ENSGT00390000012959.b.g ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l.e ENSGT00940000171486.A.c ENSGT00940000171486.A.d ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a ENSGT01030000234564.a.a.a.a.a ENSGT00390000005809 ENSGT00940000159514.j #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.f #22 ENSGT00940000155167.b.a.a ##22 Golden-line barbel MODERN SPECIES 1912 ENSSGRG00000005409 TNFRSF11B (ENSSGRG00000005407) #22 Common carp reference MODERN SPECIES 2 ENSCCRG00000055751 ENSCCRG00000058119 ENSCCRG00000078139 ENSCCRG00000060210 ENSCCRG00000077379 ENSCCRG00000068453 ENSCCRG00000060720 mboat1 (ENSCCRG00000069910) ENSCCRG00000077810 ENSCCRG00000065326 MAL2 (ENSCCRG00000081062) #20 ENSCCRG00000042635 #21 ENSCCRG00000080019 ENSCCRG00000080129 ENSCCRG00000038184 TNFRSF11B (ENSCCRG00000053689) #22 ENSCCRG00000079381 ##22 Goldfish MODERN SPECIES 1894 ENSCARG00000039417 ENSCARG00000039418 mboat1 (ENSCARG00000039426) ENSCARG00000039494 si:ch211-93i7.4 (ENSCARG00000039525) #21 TNFRSF11B (ENSCARG00000039530) #22 ENSCARG00000039533 Euteleosteomorpha ANCESTRAL SPECIES 77 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000179084 Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000155721.b.b Salmoninae ANCESTRAL SPECIES 2 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c ENSGT01030000234574.A.a.e.a Salmoninae_a ANCESTRAL SPECIES 53 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c ENSGT01030000234574.A.a.e.a Salmo ANCESTRAL SPECIES 52 ENSGT01060000250439 ENSGT00950000182863.A.b.f #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n.c #14 ENSGT00940000153769.F.n.d #14 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374.b #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a.b ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT01030000238736 ENSGT01090000260907 ENSGT00390000017802.d ENSGT01060000250608 ENSGT01030000234564.a.a.a.a.a.b ENSGT01030000234564.a.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.a.b.a ENSGT00390000010145.c.a.`b.a.a ENSGT00940000161470.a.a River trout DUPLICATION River trout MODERN SPECIES 631 zgc:194202 (ENSSTUG00000032842) mrpl13 (ENSSTUG00000032799) #13 COL14A1 (ENSSTUG00000031534) #14 deptor (ENSSTUG00000031306) #15 dscc1 (ENSSTUG00000031290) #16 taf2 (ENSSTUG00000029718) #17 ENSSTUG00000029671 enpp2 (ENSSTUG00000029111) ##18 CCN3 (ENSSTUG00000029093) #19 mal2 (ENSSTUG00000029083) #20 si:ch211-93i7.4 (ENSSTUG00000029063) #21 TNFRSF11B (ENSSTUG00000029050) #22 ENSSTUG00000042603 ##22 ENSSTUG00000042583 CARMIL1 (ENSSTUG00000040055) scgn (ENSSTUG00000039917) ENSSTUG00000039914 MTSS1 (ENSSTUG00000039708) ENSSTUG00000039701 TMEM65 (ENSSTUG00000039687) ENSSTUG00000039685 TMEM65 (ENSSTUG00000039679) ENSSTUG00000039673 ENSSTUG00000039662 MTSS1 (ENSSTUG00000039646) River trout MODERN SPECIES 158 MTBP (ENSSTUG00000020408) #12 mrpl13 (ENSSTUG00000020565) #13 COL14A1 (ENSSTUG00000020764) #14 ENSSTUG00000025936 deptor (ENSSTUG00000025942) #15 dscc1 (ENSSTUG00000026004) #16 taf2 (ENSSTUG00000026111) #17 enpp2 (ENSSTUG00000027432) ##18 CCN3 (ENSSTUG00000027956) #19 ENSSTUG00000027962 mal2 (ENSSTUG00000027966) #20 si:ch211-93i7.4 (ENSSTUG00000027979) #21 TNFRSF11B (ENSSTUG00000027996) #22 ENSSTUG00000028015 ##22 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 24 ZHX2 (ENSSSAG00000098909) #9 ENSSSAG00000093494 has2 (ENSSSAG00000105909) #10 sntb1 (ENSSSAG00000106832) #11 ENSSSAG00000109630 MTBP (ENSSSAG00000087925) #12 mrpl13 (ENSSSAG00000002931) #13 COL14A1 (ENSSSAG00000120448) #14 ENSSSAG00000117573 deptor (ENSSSAG00000088901) #15 dscc1 (ENSSSAG00000104335) #16 taf2 (ENSSSAG00000118190) #17 ENSSSAG00000036921 ##18 CCN3 (ENSSSAG00000038088) #19 si:ch211-93i7.4 (ENSSSAG00000108018) #21 TNFRSF11B (ENSSSAG00000105508) #22 ENSSSAG00000037747 ENSSSAG00000092401 ##22 ENSSSAG00000090807 segn (ENSSSAG00000036507) ENSSSAG00000121994 ENSSSAG00000099112 ENSSSAG00000105113 ENSSSAG00000119838 ENSSSAG00000108491 MBOAT1 (ENSSSAG00000114047) ENSSSAG00000108855 CDKAL1 (ENSSSAG00000103459) ENSSSAG00000115086 ENSSSAG00000105165 ENSSSAG00000086873 Atlantic salmon MODERN SPECIES 11 DERL1 (ENSSSAG00000057804) #8 TBC1D31 (ENSSSAG00000108038) #7 ENSSSAG00000046775 has2 (ENSSSAG00000092898) #10 sntb1 (ENSSSAG00000118778) #11 MTBP (ENSSSAG00000105331) #12 mrpl13 (ENSSSAG00000102301) #13 ENSSSAG00000095408 COL14A1 (ENSSSAG00000108222) #14 deptor (ENSSSAG00000094475) #15 dscc1 (ENSSSAG00000088925) #16 taf2 (ENSSSAG00000087825) #17 ENSSSAG00000095772 ##18 CCN3 (ENSSSAG00000119232) #19 si:ch211-93i7.4 (ENSSSAG00000011938) #21 TNFRSF11B (ENSSSAG00000046727) #22 ENSSSAG00000099084 ##22 ENSSSAG00000059768 ENSSSAG00000093282 ENSSSAG00000116949 ENSSSAG00000113655 ENSSSAG00000118072 ENSSSAG00000104318 ENSSSAG00000120938 MBOAT1 (ENSSSAG00000039058) E2F3 (ENSSSAG00000103911) ENSSSAG00000100768 cdkal (ENSSSAG00000100296) ENSSSAG00000052293 ENSSSAG00000106388 sox4 (ENSSSAG00000112690) Oncorhynchus ANCESTRAL SPECIES 50 ENSGT00940000153859.b #7 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.b ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b.f.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c Rainbow trout MODERN SPECIES 11 sntb1 (ENSOMYG00000056544) #11 ENSOMYG00000061955 MTBP (ENSOMYG00000027394) #12 mrpl13 (ENSOMYG00000027326) #13 ENSOMYG00000050512 COL14A1 (ENSOMYG00000057449) #14 deptor (ENSOMYG00000025343) #15 dscc1 (ENSOMYG00000025144) #16 taf2 (ENSOMYG00000067404) #17 enpp2 (ENSOMYG00000024404) ##18 CCN3 (ENSOMYG00000076466) #19 mal2 (ENSOMYG00000076128) #20 si:ch211-93i7.4 (ENSOMYG00000028979) #21 ENSOMYG00000051749 ENSOMYG00000068866 TNFRSF11B (ENSOMYG00000053518) #22 ENSOMYG00000048320 ##22 ENSOMYG00000069508 ENSOMYG00000072640 ENSOMYG00000058184 ENSOMYG00000062944 ENSOMYG00000065426 ENSOMYG00000039282 ENSOMYG00000069638 MBOAT1 (ENSOMYG00000000834) E2F3 (ENSOMYG00000057430) ENSOMYG00000054723 ENSOMYG00000060234 ENSOMYG00000066416 ENSOMYG00000060216 ENSOMYG00000065364 Oncorhynchus_a ANCESTRAL SPECIES 101 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT01060000250439.b ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1291 deptor (ENSOKIG00005047742) #15 dscc1 (ENSOKIG00005047842) #16 taf2 (ENSOKIG00005047913) #17 ENSOKIG00005048255 enpp2 (ENSOKIG00005048317) ##18 CCN3 (ENSOKIG00005049018) #19 mal2 (ENSOKIG00005049023) #20 si:ch211-93i7.4 (ENSOKIG00005049027) #21 TNFRSF11B (ENSOKIG00005049031) #22 ENSOKIG00005049037 ##22 ENSOKIG00005049042 Coho salmon MODERN SPECIES 31 has2 (ENSOKIG00005047886) #10 ENSOKIG00005047893 ENSOKIG00005047896 sntb1 (ENSOKIG00005047905) #11 MTBP (ENSOKIG00005047920) #12 mrpl13 (ENSOKIG00005047934) #13 COL14A1 (ENSOKIG00005048051) #14 deptor (ENSOKIG00005048769) #15 dscc1 (ENSOKIG00005048820) #16 taf2 (ENSOKIG00005048929) #17 ENSOKIG00005049235 enpp2 (ENSOKIG00005049347) ##18 CCN3 (ENSOKIG00005049815) #19 mal2 (ENSOKIG00005049817) #20 si:ch211-93i7.4 (ENSOKIG00005049819) #21 TNFRSF11B (ENSOKIG00005049821) #22 ENSOKIG00005049827 ##22 CARMIL1 (ENSOKIG00005049853) ENSOKIG00005049975 TMEM65 (ENSOKIG00005049979) ENSOKIG00005049980 MTSS1 (ENSOKIG00005050000) SCGN (ENSOKIG00005050042) TMEM65 (ENSOKIG00005050059) mboat1 (ENSOKIG00005050073) E2F3 (ENSOKIG00005050089) ENSOKIG00005050091 sox4b (ENSOKIG00005050093) SOX4 (ENSOKIG00005050095) ENSOKIG00005050100 ENSOKIG00005050111 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 30 pkz (ENSOTSG00005001876) nppc (ENSOTSG00005001869) ncl (ENSOTSG00005001843) b3gnt7 (ENSOTSG00005001832) ARMC9 (ENSOTSG00005001827) polr2h (ENSOTSG00005001821) ENSOTSG00005001818 ENSOTSG00005001566 ENSOTSG00005001553 EPHB3 (ENSOTSG00005001367) ENSOTSG00005000261 ENSOTSG00005000147 ENSOTSG00005000112 zbtb11 (ENSOTSG00005031898) ENSOTSG00005031896 ENSOTSG00005031895 #22 tp63 (ENSOTSG00005031749) ENSOTSG00005031744 ENSOTSG00005031743 ENSOTSG00005031740 ENSOTSG00005031738 ENSOTSG00005031660 DPT (ENSOTSG00005031659) ENSOTSG00005031657 CDKL5 (ENSOTSG00005031507) ENSOTSG00005031506 NHS (ENSOTSG00005031476) Chinook salmon MODERN SPECIES 1602 ENSOTSG00005020558 #22 ENSOTSG00005020559 ##22 Huchen MODERN SPECIES 7068 TNFRSF11B (ENSHHUG00000011600) #22 Northern pike MODERN SPECIES 15 FAM83A (ENSELUG00000023006) TBC1D31 (ENSELUG00000023075) #7 derl1 (ENSELUG00000023097) #8 has2 (ENSELUG00000023115) #10 sntb1 (ENSELUG00000023160) #11 MTBP (ENSELUG00000023257) #12 mrpl13 (ENSELUG00000023304) #13 COL14A1 (ENSELUG00000023377) #14 ENSELUG00000028160 ENSELUG00000034146 deptor (ENSELUG00000023449) #15 dscc1 (ENSELUG00000023509) #16 taf2 (ENSELUG00000023605) #17 enpp2 (ENSELUG00000023691) ##18 CCN3 (ENSELUG00000024180) #19 TNFRSF11B (ENSELUG00000024329) #22 mal2 (ENSELUG00000024226) #20 si:ch211-93i7.4 (ENSELUG00000024237) #21 ENSELUG00000030865 ##22 ENSELUG00000024407 ##22 CARMIL1 (ENSELUG00000024518) ENSELUG00000024565 LPCAT1 (ENSELUG00000002646) slc6a3 (ENSELUG00000002666) DCDC2 (ENSELUG00000002678) nrsn1 (ENSELUG00000002687) ENSELUG00000002690 sox4b (ENSELUG00000002697) ENSELUG00000002700 CDKAL1 (ENSELUG00000002713) ENSELUG00000002704 Acanthomorphata ANCESTRAL SPECIES 306 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000162635 ENSGT00940000155112.B.a ENSGT00950000183108.a.c Euacanthomorphacea ANCESTRAL SPECIES 71 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00940000159963 #19 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000177739 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Tiger tail seahorse MODERN SPECIES 208 tyw5 (ENSHCOG00000010478) LRRFIP1 (ENSHCOG00000010534) ENSHCOG00000010582 ENSHCOG00000000330 ENSHCOG00000010636 CDKAL1 (ENSHCOG00000000332) E2F3 (ENSHCOG00000010670) ENSHCOG00000010675 mboat1 (ENSHCOG00000010922) TMEM65 (ENSHCOG00000010948) MTSS1 (ENSHCOG00000010969) mal2 (ENSHCOG00000010975) #20 ENSHCOG00000010989 ENSHCOG00000010997 COLEC10 (ENSHCOG00000011065) #21 TNFRSF11B (ENSHCOG00000011118) #22 ENSHCOG00000011138 ##22 CARMIL1 (ENSHCOG00000011155) scgn (ENSHCOG00000011179) CCN3 (ENSHCOG00000011418) #19 sntb1 (ENSHCOG00000011459) #11 ENSHCOG00000011582 #12 ENSHCOG00000011612 ENSHCOG00000011623 ndrg1b (ENSHCOG00000011633) ENSHCOG00000011686 ENSHCOG00000011697 CLPTM1L (ENSHCOG00000000747) ENSHCOG00000011769 MRS2 (ENSHCOG00000011796) ENSHCOG00000011808 Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Ovalentaria ANCESTRAL SPECIES 3 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Atherinomorphae ANCESTRAL SPECIES ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Oryzias ANCESTRAL SPECIES 2 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 Oryzias_a ANCESTRAL SPECIES 9 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 Japanese Medaka HdrR MODERN SPECIES 7 irx4a (ENSORLG00000005134) LPCAT1 (ENSORLG00000005120) slc6a3 (ENSORLG00000005085) DCDC2 (ENSORLG00000005024) nrsn1 (ENSORLG00000005016) ENSORLG00000027453 sox4b (ENSORLG00000005001) ENSORLG00000022696 CDKAL1 (ENSORLG00000004979) E2F3 (ENSORLG00000027588) mboat1 (ENSORLG00000004964) ENSORLG00000004954 MTSS1 (ENSORLG00000004945) mal2 (ENSORLG00000023500) #20 ENSORLG00000004920 #21 TNFRSF11B (ENSORLG00000004915) #22 opgb (ENSORLG00000004902) ##22 ENSORLG00000028861 ENSORLG00000025825 ENSORLG00000004892 ENSORLG00000004844 CCN3 (ENSORLG00000029702) #19 ENSORLG00000025758 ENSORLG00000025100 sntb1 (ENSORLG00000022473) #11 ENSORLG00000004821 #12 ENSORLG00000004805 ENSORLG00000004793 ENSORLG00000004785 ENSORLG00000004751 CLPTM1L (ENSORLG00000004721) Chinese medaka MODERN SPECIES 678 irx1a (ENSOSIG00000022425) irx2a (ENSOSIG00000022427) irx4a (ENSOSIG00000022434) LPCAT1 (ENSOSIG00000022443) slc6a3 (ENSOSIG00000022557) nrsn1 (ENSOSIG00000022977) sox4b (ENSOSIG00000022993) CDKAL1 (ENSOSIG00000023018) E2F3 (ENSOSIG00000023020) mboat1 (ENSOSIG00000023032) TMEM65 (ENSOSIG00000023037) MTSS1 (ENSOSIG00000023043) mal2 (ENSOSIG00000023045) #20 TNFRSF11B (ENSOSIG00000023046) #22 Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 Indian medaka MODERN SPECIES 5 irx2a (ENSOMEG00000013826) irx4a (ENSOMEG00000000923) LPCAT1 (ENSOMEG00000013762) slc6a3 (ENSOMEG00000013700) ENSOMEG00000013653 nrsn1 (ENSOMEG00000013622) yipf2 (ENSOMEG00000013568) sox4b (ENSOMEG00000013539) CDKAL1 (ENSOMEG00000013480) E2F3 (ENSOMEG00000013401) mboat1 (ENSOMEG00000013368) TMEM65 (ENSOMEG00000013323) MTSS1 (ENSOMEG00000013271) mal2 (ENSOMEG00000013151) #20 si:ch211-93i7.4 (ENSOMEG00000013125) #21 TNFRSF11B (ENSOMEG00000013112) #22 ENSOMEG00000013098 ##22 ENSOMEG00000013077 ##22 CARMIL1 (ENSOMEG00000013048) scgn (ENSOMEG00000013000) CCN3 (ENSOMEG00000012898) #19 sntb1 (ENSOMEG00000012675) #11 ENSOMEG00000012611 #12 ENSOMEG00000012557 ENSOMEG00000012484 ndrg1b (ENSOMEG00000012420) ENSOMEG00000012259 ENSOMEG00000011904 MRS2 (ENSOMEG00000011853) ENSOMEG00000011802 ENSOMEG00000011783 Javanese ricefish MODERN SPECIES 7 lin7b (ENSOJAG00000019948) irx1a (ENSOJAG00000019942) irx2a (ENSOJAG00000019936) irx4a (ENSOJAG00000019927) LPCAT1 (ENSOJAG00000019608) slc6a3 (ENSOJAG00000018621) nrsn1 (ENSOJAG00000018497) sox4b (ENSOJAG00000018493) CDKAL1 (ENSOJAG00000018116) E2F3 (ENSOJAG00000018065) mboat1 (ENSOJAG00000018014) TMEM65 (ENSOJAG00000018004) MTSS1 (ENSOJAG00000017957) mal2 (ENSOJAG00000017944) #20 si:ch211-93i7.4 (ENSOJAG00000017933) #21 ENSOJAG00000017914 #22 ENSOJAG00000017901 ##22 CARMIL1 (ENSOJAG00000016246) scgn (ENSOJAG00000016099) CCN3 (ENSOJAG00000016093) #19 sntb1 (ENSOJAG00000015985) #11 ENSOJAG00000015971 #12 ENSOJAG00000015824 ENSOJAG00000015809 ndrg1b (ENSOJAG00000015527) ENSOJAG00000010756 ENSOJAG00000010177 MRS2 (ENSOJAG00000009982) ENSOJAG00000009966 CPQ (ENSOJAG00000009529) dscc1 (ENSOJAG00000009392) #16 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 NAME_4 ANCESTRAL SPECIES 261 ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a Mummichog MODERN SPECIES 343 ENSFHEG00000016930 E2F3 (ENSFHEG00000016914) ENSFHEG00000016907 mboat1 (ENSFHEG00000016900) TMEM65 (ENSFHEG00000016889) MTSS1 (ENSFHEG00000016864) mal2 (ENSFHEG00000016791) #20 si:ch211-93i7.4 (ENSFHEG00000016784) #21 TNFRSF11B (ENSFHEG00000016775) #22 ENSFHEG00000016770 ##22 ENSFHEG00000016756 CARMIL1 (ENSFHEG00000016748) scgn (ENSFHEG00000016657) Sheepshead minnow MODERN SPECIES 409 sox4b (ENSCVAG00000008594) CDKAL1 (ENSCVAG00000008636) E2F3 (ENSCVAG00000008651) mboat1 (ENSCVAG00000008669) TMEM65 (ENSCVAG00000008683) MTSS1 (ENSCVAG00000008767) mal2 (ENSCVAG00000008779) #20 si:ch211-93i7.4 (ENSCVAG00000008789) #21 TNFRSF11B (ENSCVAG00000008948) #22 ENSCVAG00000008984 ##22 Poeciliinae ANCESTRAL SPECIES 22 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Poecilia ANCESTRAL SPECIES ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 NAME_6 ANCESTRAL SPECIES 197 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 523 mal2 (ENSPFOG00000008352) #20 COLEC10 (ENSPFOG00000008388) #21 TNFRSF11B (ENSPFOG00000008474) #22 ENSPFOG00000008555 ##22 TNFRSF11B (ENSPFOG00000022852) #22 ENSPFOG00000008573 ##22 CARMIL1 (ENSPFOG00000008604) scgn (ENSPFOG00000009307) CCN3 (ENSPFOG00000009446) #19 ENSPFOG00000022169 ENSPFOG00000024134 sntb1 (ENSPFOG00000009607) #11 ENSPFOG00000009740 #12 ENSPFOG00000009919 ENSPFOG00000010038 ndrg1b (ENSPFOG00000010083) ENSPFOG00000010090 ENSPFOG00000010095 Amazon molly MODERN SPECIES 523 mal2 (ENSPFOG00000008352) #20 COLEC10 (ENSPFOG00000008388) #21 TNFRSF11B (ENSPFOG00000008474) #22 ENSPFOG00000008555 ##22 TNFRSF11B (ENSPFOG00000022852) #22 ENSPFOG00000008573 ##22 CARMIL1 (ENSPFOG00000008604) scgn (ENSPFOG00000009307) CCN3 (ENSPFOG00000009446) #19 ENSPFOG00000022169 ENSPFOG00000024134 sntb1 (ENSPFOG00000009607) #11 ENSPFOG00000009740 #12 ENSPFOG00000009919 ENSPFOG00000010038 ndrg1b (ENSPFOG00000010083) ENSPFOG00000010090 ENSPFOG00000010095 ENSPFOG00000010111 MRS2 (ENSPFOG00000010268) Sailfin molly MODERN SPECIES 1688 mal2 (ENSPLAG00000019472) #20 si:ch211-93i7.4 (ENSPLAG00000019465) #21 TNFRSF11B (ENSPLAG00000019447) #22 Guppy MODERN SPECIES 446 irx2a (ENSPREG00000011115) irx4a (ENSPREG00000011089) LPCAT1 (ENSPREG00000011063) slc6a3 (ENSPREG00000011037) DCDC2 (ENSPREG00000011016) nrsn1 (ENSPREG00000010983) sox4b (ENSPREG00000010954) CDKAL1 (ENSPREG00000010873) ENSPREG00000010836 ENSPREG00000010821 mboat1 (ENSPREG00000010764) TMEM65 (ENSPREG00000010739) MTSS1 (ENSPREG00000010677) mal2 (ENSPREG00000010576) #20 ENSPREG00000010482 #21 TNFRSF11B (ENSPREG00000010400) #22 ENSPREG00000010374 ##22 CARMIL1 (ENSPREG00000010301) scgn (ENSPREG00000010277) ENSPREG00000010273 CCN3 (ENSPREG00000010039) #19 ENSPREG00000009995 sntb1 (ENSPREG00000009976) #11 ENSPREG00000009877 #12 ZFAT (ENSPREG00000009790) ENSPREG00000009772 ndrg1b (ENSPREG00000009752) ENSPREG00000009701 ENSPREG00000009684 ENSPREG00000009608 MRS2 (ENSPREG00000009590) Platyfish MODERN SPECIES 17 irx1a (ENSXMAG00000022002) irx2a (ENSXMAG00000021240) irx4a (ENSXMAG00000005284) slc6a3 (ENSXMAG00000022758) ENSXMAG00000005263 nrsn1 (ENSXMAG00000005256) ENSXMAG00000009656 ENSXMAG00000023721 CDKAL1 (ENSXMAG00000009663) E2F3 (ENSXMAG00000021029) mboat1 (ENSXMAG00000009682) TMEM65 (ENSXMAG00000009701) MTSS1 (ENSXMAG00000009708) mal2 (ENSXMAG00000009738) #20 si:ch211-93i7.4 (ENSXMAG00000009740) #21 TNFRSF11B (ENSXMAG00000021500) #22 ENSXMAG00000009762 ##22 CARMIL1 (ENSXMAG00000007106) scgn (ENSXMAG00000007126) CCN3 (ENSXMAG00000027667) #19 ENSXMAG00000025094 ENSXMAG00000022539 sntb1 (ENSXMAG00000011008) #11 ENSXMAG00000010999 #12 ENSXMAG00000010993 ENSXMAG00000018281 ndrg1b (ENSXMAG00000010969) ENSXMAG00000010911 ENSXMAG00000010909 ENSXMAG00000030035 MRS2 (ENSXMAG00000010869) Aplocheiloidei ANCESTRAL SPECIES 26 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Mangrove rivulus MODERN SPECIES 14 irx2a (ENSKMAG00000019798) irx4a (ENSKMAG00000019771) LPCAT1 (ENSKMAG00000019716) slc6a3 (ENSKMAG00000019572) DCDC2 (ENSKMAG00000019506) nrsn1 (ENSKMAG00000019486) ENSKMAG00000019476 sox4b (ENSKMAG00000019466) CDKAL1 (ENSKMAG00000019441) ENSKMAG00000019420 mboat1 (ENSKMAG00000019402) TMEM65 (ENSKMAG00000019384) MTSS1 (ENSKMAG00000019293) mal2 (ENSKMAG00000019257) #20 ENSKMAG00000019246 #21 TNFRSF11B (ENSKMAG00000019227) #22 ENSKMAG00000019202 ##22 CARMIL1 (ENSKMAG00000019103) scgn (ENSKMAG00000019038) CCN3 (ENSKMAG00000018904) #19 ENSKMAG00000018873 sntb1 (ENSKMAG00000018846) #11 ENSKMAG00000018808 PTP4A3 (ENSKMAG00000018768) ndrg1b (ENSKMAG00000018710) ENSKMAG00000018338 ENSKMAG00000018242 ENSKMAG00000018211 MRS2 (ENSKMAG00000018186) ENSKMAG00000018172 CPQ (ENSKMAG00000018148) Turquoise killifish MODERN SPECIES 1614 sox4b (ENSNFUG00015006825) ENSNFUG00015006828 CDKAL1 (ENSNFUG00015006890) ENSNFUG00015007413 ENSNFUG00015007415 ENSNFUG00015007417 ENSNFUG00015007422 E2F3 (ENSNFUG00015007427) mboat1 (ENSNFUG00015007471) ENSNFUG00015007959 TMEM65 (ENSNFUG00015007962) MTSS1 (ENSNFUG00015008065) ENSNFUG00015008760 Nfu_g_1_001734 (ENSNFUG00015006035) #20 si:ch211-93i7.4 (ENSNFUG00015006040) #21 TNFRSF11B (ENSNFUG00015006046) #22 ENSNFUG00015006051 ##22 CARMIL1 (ENSNFUG00015006211) scgn (ENSNFUG00015007466) CCN3 (ENSNFUG00015007497) #19 ENSNFUG00015007502 SNTB1 (ENSNFUG00015007506) #11 ENSNFUG00015007519 #12 lyrm1 (ENSNFUG00015007553) ENSNFUG00015007609 #14 MRPL13 (ENSNFUG00015008204) #13 dscc1 (ENSNFUG00015008217) #16 ENSNFUG00015008253 tmem222a (ENSNFUG00015008257) tpbgl (ENSNFUG00015008265) ENSNFUG00015008268 Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Cichlidae ANCESTRAL SPECIES 26 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a Haplochromini ANCESTRAL SPECIES 24 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Burton s mouthbrooder MODERN SPECIES 446 CDKAL1 (ENSHBUG00000011246) E2F3 (ENSHBUG00000011267) mboat1 (ENSHBUG00000011296) TMEM65 (ENSHBUG00000011307) MTSS1 (ENSHBUG00000011382) mal2 (ENSHBUG00000011415) #20 si:ch211-93i7.4 (ENSHBUG00000011431) #21 TNFRSF11B (ENSHBUG00000000308) #22 ENSHBUG00000011445 ENSHBUG00000011521 ##22 CARMIL1 (ENSHBUG00000011787) scgn (ENSHBUG00000011832) CCN3 (ENSHBUG00000011844) #19 ENSHBUG00000011853 sntb1 (ENSHBUG00000011900) #11 ENSHBUG00000011919 #12 ENSHBUG00000011937 PTP4A3 (ENSHBUG00000011967) ndrg1b (ENSHBUG00000012032) ENSHBUG00000012132 ENSHBUG00000012140 ENSHBUG00000012151 MRS2 (ENSHBUG00000012163) Haplochromini_A ANCESTRAL SPECIES 30 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b P. nyererei MODERN SPECIES 441 irx1a (ENSPNYG00000008294) irx2a (ENSPNYG00000008324) irx4a (ENSPNYG00000008347) LPCAT1 (ENSPNYG00000008381) slc6a3 (ENSPNYG00000008419) nrsn1 (ENSPNYG00000008454) ENSPNYG00000008473 sox4b (ENSPNYG00000008483) CDKAL1 (ENSPNYG00000008533) E2F3 (ENSPNYG00000008585) mboat1 (ENSPNYG00000008612) TMEM65 (ENSPNYG00000008687) MTSS1 (ENSPNYG00000008734) mal2 (ENSPNYG00000008827) #20 si:ch211-93i7.4 (ENSPNYG00000008846) #21 TNFRSF11B (ENSPNYG00000008870) #22 Haplochromini_B ANCESTRAL SPECIES 50 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.f.a.a.a ENSGT01060000248575.D.c.b.a.b.a.f.a.b ENSGT01060000248575.D.c.b.a.b.a.e ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a.o.c ##22 ENSGT00940000155167.b.a.a.o.d ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Zebra mbuna MODERN SPECIES 1093 nrsn1 (ENSMZEG00005001555) ENSMZEG00005001482 ENSMZEG00005000172 ENSMZEG00005000103 ENSMZEG00005000064 ENSMZEG00005025705 ENSMZEG00005025628 sox4b (ENSMZEG00005025621) CDKAL1 (ENSMZEG00005025619) E2F3 (ENSMZEG00005025616) mboat1 (ENSMZEG00005025614) TMEM65 (ENSMZEG00005025612) MTSS1 (ENSMZEG00005025607) mal2 (ENSMZEG00005025602) #20 si:ch211-93i7.4 (ENSMZEG00005025598) #21 TNFRSF11B (ENSMZEG00005025593) #22 ENSMZEG00005025590 ##22 ENSMZEG00005025584 ##22 CARMIL1 (ENSMZEG00005025572) scgn (ENSMZEG00005025566) CCN3 (ENSMZEG00005025563) #19 ENSMZEG00005025560 sntb1 (ENSMZEG00005025556) #11 ENSMZEG00005025550 #12 ENSMZEG00005025547 PTP4A3 (ENSMZEG00005025545) ndrg1b (ENSMZEG00005025541) ENSMZEG00005025519 ENSMZEG00005025538 ENSMZEG00005025515 ENSMZEG00005025513 Eastern happy MODERN SPECIES 2 ENSACLG00000015940 ENSACLG00000015148 ENSACLG00000014932 ENSACLG00000014790 ENSACLG00000014727 ENSACLG00000014006 sox4b (ENSACLG00000013933) ENSACLG00000013888 CDKAL1 (ENSACLG00000013879) E2F3 (ENSACLG00000013754) mboat1 (ENSACLG00000013725) TMEM65 (ENSACLG00000013701) MTSS1 (ENSACLG00000013576) mal2 (ENSACLG00000013562) #20 si:ch211-93i7.4 (ENSACLG00000013556) #21 TNFRSF11B (ENSACLG00000013549) #22 ENSACLG00000013501 ##22 ENSACLG00000013493 ##22 CARMIL1 (ENSACLG00000013467) scgn (ENSACLG00000013447) ENSACLG00000013444 CCN3 (ENSACLG00000013439) #19 ENSACLG00000013437 sntb1 (ENSACLG00000013426) #11 ENSACLG00000013413 #12 ENSACLG00000013397 PTP4A3 (ENSACLG00000013391) ndrg1b (ENSACLG00000013370) ENSACLG00000013325 ENSACLG00000013321 ENSACLG00000013307 Lyretail cichlid MODERN SPECIES 331 CDKAL1 (ENSNBRG00000019626) E2F3 (ENSNBRG00000019645) mboat1 (ENSNBRG00000019687) TMEM65 (ENSNBRG00000019786) MTSS1 (ENSNBRG00000019815) mal2 (ENSNBRG00000019909) #20 si:ch211-93i7.4 (ENSNBRG00000019931) #21 TNFRSF11B (ENSNBRG00000019947) #22 ENSNBRG00000020004 ##22 ENSNBRG00000020042 ##22 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) #19 ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) #11 ENSNBRG00000020565 #12 ENSNBRG00000020616 PTP4A3 (ENSNBRG00000020695) ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 ENSNBRG00000020964 ENSNBRG00000020979 ENSNBRG00000021124 Nile tilapia MODERN SPECIES 2 DCDC2 (ENSONIG00000031993) nrsn1 (ENSONIG00000007078) ENSONIG00000007077 ENSONIG00000027348 sox4b (ENSONIG00000020748) ENSONIG00000034194 CDKAL1 (ENSONIG00000007075) E2F3 (ENSONIG00000007069) ENSONIG00000038591 mboat1 (ENSONIG00000007061) TMEM65 (ENSONIG00000007059) ENSONIG00000038235 MTSS1 (ENSONIG00000007053) mal2 (ENSONIG00000033397) #20 si:ch211-93i7.4 (ENSONIG00000007048) #21 TNFRSF11B (ENSONIG00000007044) #22 ENSONIG00000037567 ##22 ENSONIG00000040747 ##22 ENSONIG00000028296 ##22 ENSONIG00000007042 ##22 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) #19 ENSONIG00000007019 sntb1 (ENSONIG00000007016) #11 ENSONIG00000007013 #12 ENSONIG00000007011 PTP4A3 (ENSONIG00000006856) ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ENSONIG00000039329 Midas cichlid MODERN SPECIES 1213 sox4b (ENSACIG00000012884) CDKAL1 (ENSACIG00000012808) E2F3 (ENSACIG00000012779) ENSACIG00000012772 mboat1 (ENSACIG00000012746) TMEM65 (ENSACIG00000012725) MTSS1 (ENSACIG00000012687) mal2 (ENSACIG00000012643) #20 ENSACIG00000012630 ENSACIG00000012528 ENSACIG00000012483 #22 ENSACIG00000012469 ENSACIG00000012448 ##22 CARMIL1 (ENSACIG00000012371) scgn (ENSACIG00000012331) CCN3 (ENSACIG00000012172) #19 ENSACIG00000012146 sntb1 (ENSACIG00000012120) #11 ENSACIG00000012032 #12 ZFAT (ENSACIG00000011878) PTP4A3 (ENSACIG00000011864) ndrg1b (ENSACIG00000011308) ENSACIG00000011223 ENSACIG00000011214 ENSACIG00000011184 MRS2 (ENSACIG00000011167) Pomacentridae ANCESTRAL SPECIES 23 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Amphiprion ANCESTRAL SPECIES 54 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Clown anemonefish MODERN SPECIES 1775 TMEM65 (ENSAOCG00000005806) MTSS1 (ENSAOCG00000005775) mal2 (ENSAOCG00000005686) #20 ENSAOCG00000005680 si:ch211-93i7.4 (ENSAOCG00000005668) #21 TNFRSF11B (ENSAOCG00000001965) #22 ENSAOCG00000005629 ##22 CARMIL1 (ENSAOCG00000005563) scgn (ENSAOCG00000005428) Orange clownfish MODERN SPECIES 21 LPCAT1 (ENSAPEG00000015191) slc6a3 (ENSAPEG00000015126) DCDC2 (ENSAPEG00000015093) nrsn1 (ENSAPEG00000015059) ENSAPEG00000014975 sox4b (ENSAPEG00000014937) CDKAL1 (ENSAPEG00000014801) E2F3 (ENSAPEG00000014727) mboat1 (ENSAPEG00000014677) TMEM65 (ENSAPEG00000014616) MTSS1 (ENSAPEG00000014560) mal2 (ENSAPEG00000014548) #20 ENSAPEG00000014538 ENSAPEG00000014525 si:ch211-93i7.4 (ENSAPEG00000014515) #21 TNFRSF11B (ENSAPEG00000014503) #22 ENSAPEG00000014480 ##22 CARMIL1 (ENSAPEG00000014382) scgn (ENSAPEG00000014286) CCN3 (ENSAPEG00000014256) #19 ENSAPEG00000014245 sntb1 (ENSAPEG00000014184) #11 ENSAPEG00000014032 #12 ENSAPEG00000013945 ENSAPEG00000013902 ENSAPEG00000013880 ENSAPEG00000013611 ENSAPEG00000013568 CLPTM1L (ENSAPEG00000013476) MRS2 (ENSAPEG00000013454) ENSAPEG00000013442 Spiny chromis MODERN SPECIES 1293 ENSAPOG00000006731 TNFRSF11B (ENSAPOG00000006720) #22 ENSAPOG00000006712 ##22 CARMIL1 (ENSAPOG00000006669) scgn (ENSAPOG00000006374) Bicolor damselfish MODERN SPECIES 1463 si:ch211-93i7.4 (ENSSPAG00000010010) #21 ENSSPAG00000010020 TNFRSF11B (ENSSPAG00000010042) #22 ENSSPAG00000010059 ##22 CARMIL1 (ENSSPAG00000010096) scgn (ENSSPAG00000010176) Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Tetraodontidae ANCESTRAL SPECIES 14 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Fugu MODERN SPECIES 19 ENSTRUG00000030730 irx1a (ENSTRUG00000007467) irx2a (ENSTRUG00000007607) irx4a (ENSTRUG00000007775) LPCAT1 (ENSTRUG00000007993) DCDC2 (ENSTRUG00000020536) nrsn1 (ENSTRUG00000008167) sox4b (ENSTRUG00000008283) CDKAL1 (ENSTRUG00000008317) E2F3 (ENSTRUG00000025067) mboat1 (ENSTRUG00000008619) TMEM65 (ENSTRUG00000022028) MTSS1 (ENSTRUG00000009080) ENSTRUG00000009396 si:ch211-93i7.4 (ENSTRUG00000022660) #21 ENSTRUG00000009463 #22 ENSTRUG00000009552 ##22 CARMIL1 (ENSTRUG00000009574) scgn (ENSTRUG00000009987) CCN3 (ENSTRUG00000010104) #19 sntb1 (ENSTRUG00000010268) #11 ENSTRUG00000010534 #12 ENSTRUG00000010724 PTP4A3 (ENSTRUG00000010904) ndrg1b (ENSTRUG00000010966) ENSTRUG00000011167 ENSTRUG00000032169 ENSTRUG00000028405 MRS2 (ENSTRUG00000011868) ENSTRUG00000011927 ENSTRUG00000012025 Tetraodon MODERN SPECIES 23 irx2a (ENSTNIG00000007221) irx4a (ENSTNIG00000007220) ENSTNIG00000001193 LPCAT1 (ENSTNIG00000007219) slc6a3 (ENSTNIG00000007218) DCDC2 (ENSTNIG00000007217) nrsn1 (ENSTNIG00000007216) sox4b (ENSTNIG00000009619) CDKAL1 (ENSTNIG00000009620) E2F3 (ENSTNIG00000009621) mboat1 (ENSTNIG00000009622) TMEM65 (ENSTNIG00000009623) MTSS1 (ENSTNIG00000009624) ENSTNIG00000009625 mal2 (ENSTNIG00000009626) #20 ENSTNIG00000000468 #22 ENSTNIG00000009627 ##22 CARMIL1 (ENSTNIG00000009628) scgn (ENSTNIG00000009629) CCN3 (ENSTNIG00000009630) #19 sntb1 (ENSTNIG00000009631) #11 ENSTNIG00000009632 #12 ENSTNIG00000009633 ENSTNIG00000009634 ndrg1b (ENSTNIG00000009635) ENSTNIG00000009636 CLPTM1L (ENSTNIG00000009637) MRS2 (ENSTNIG00000009638) ENSTNIG00000009639 CPQ (ENSTNIG00000009640) ENSTNIG00000009641 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Perciformes ANCESTRAL SPECIES 3 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Lumpfish MODERN SPECIES 7 slc6a3 (ENSCLMG00005004616) ENSCLMG00005004650 DCDC2 (ENSCLMG00005004675) nrsn1 (ENSCLMG00005004787) sox4b (ENSCLMG00005004791) CDKAL1 (ENSCLMG00005004820) ENSCLMG00005006229 ENSCLMG00005006230 mboat1 (ENSCLMG00005006235) TMEM65 (ENSCLMG00005006240) MTSS1 (ENSCLMG00005006246) mal2 (ENSCLMG00005006297) #20 ENSCLMG00005006299 ENSCLMG00005006306 si:ch211-93i7.4 (ENSCLMG00005006308) #21 TNFRSF11B (ENSCLMG00005006309) #22 ENSCLMG00005006311 ##22 CARMIL1 (ENSCLMG00005006319) CLPTM1L (ENSCLMG00005006327) ENSCLMG00005006328 ENSCLMG00005006340 ENSCLMG00005006698 ENSCLMG00005006960 ENSCLMG00005006966 ENSCLMG00005007036 #12 sntb1 (ENSCLMG00005007258) #11 ENSCLMG00005007260 CCN3 (ENSCLMG00005007266) #19 scgn (ENSCLMG00005007294) MRS2 (ENSCLMG00005007298) ENSCLMG00005007546 Stickleback MODERN SPECIES 19 ADAMTS16 (ENSGACG00000006552) irx1a (ENSGACG00000006572) irx2a (ENSGACG00000006581) nrsn1 (ENSGACG00000006587) irx4a (ENSGACG00000006607) LPCAT1 (ENSGACG00000006610) slc6a3 (ENSGACG00000006614) sox4b (ENSGACG00000006620) CDKAL1 (ENSGACG00000006622) E2F3 (ENSGACG00000006632) TMEM65 (ENSGACG00000006642) MTSS1 (ENSGACG00000006650) mal2 (ENSGACG00000006665) #20 ENSGACG00000006682 si:ch211-93i7.4 (ENSGACG00000006686) #21 TNFRSF11B (ENSGACG00000006690) #22 ENSGACG00000006706 ##22 CARMIL1 (ENSGACG00000006707) scgn (ENSGACG00000006883) CCN3 (ENSGACG00000006901) #19 sntb1 (ENSGACG00000006912) #11 ENSGACG00000006944 #12 ENSGACG00000006955 PTP4A3 (ENSGACG00000006970) ENSGACG00000006984 ENSGACG00000007004 ENSGACG00000007020 ENSGACG00000007035 ENSGACG00000007038 ENSGACG00000007040 ENSGACG00000007045 Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Pike perch MODERN SPECIES 15 nrsn1 (ENSSLUG00000005268) ENSSLUG00000005276 ENSSLUG00000005310 ENSSLUG00000005398 ENSSLUG00000005411 ENSSLUG00000005414 sox4b (ENSSLUG00000005417) ENSSLUG00000005424 CDKAL1 (ENSSLUG00000005489) E2F3 (ENSSLUG00000006126) mboat1 (ENSSLUG00000006138) TMEM65 (ENSSLUG00000006146) MTSS1 (ENSSLUG00000006173) mal2 (ENSSLUG00000006226) #20 si:ch211-93i7.4 (ENSSLUG00000006233) #21 TNFRSF11B (ENSSLUG00000006243) #22 ENSSLUG00000006253 ##22 ENSSLUG00000006266 CARMIL1 (ENSSLUG00000006360) scgn (ENSSLUG00000007175) CCN3 (ENSSLUG00000007191) #19 ENSSLUG00000007196 ENSSLUG00000007203 sntb1 (ENSSLUG00000007205) #11 ENSSLUG00000007216 #12 ZFAT (ENSSLUG00000007280) PTP4A3 (ENSSLUG00000007370) ENSSLUG00000007405 ENSSLUG00000007804 CLPTM1L (ENSSLUG00000005157) MRS2 (ENSSLUG00000005198) Channel bull blenny MODERN SPECIES 7 irx1a (ENSCGOG00000018630) irx2a (ENSCGOG00000018629) irx4a (ENSCGOG00000018626) LPCAT1 (ENSCGOG00000018622) slc6a3 (ENSCGOG00000018213) nrsn1 (ENSCGOG00000018198) ENSCGOG00000018191 sox4b (ENSCGOG00000018189) CDKAL1 (ENSCGOG00000017807) E2F3 (ENSCGOG00000017795) mboat1 (ENSCGOG00000017719) TMEM65 (ENSCGOG00000017715) MTSS1 (ENSCGOG00000017359) mal2 (ENSCGOG00000017357) #20 ENSCGOG00000017354 ENSCGOG00000017350 #22 ENSCGOG00000017345 ##22 CARMIL1 (ENSCGOG00000015217) scgn (ENSCGOG00000015157) CCN3 (ENSCGOG00000015068) #19 ENSCGOG00000015065 sntb1 (ENSCGOG00000015039) #11 ENSCGOG00000015033 #12 ENSCGOG00000015016 PTP4A3 (ENSCGOG00000015000) ndrg1b (ENSCGOG00000014867) ENSCGOG00000011777 CLPTM1L (ENSCGOG00000011685) MRS2 (ENSCGOG00000011642) ENSCGOG00000011638 CPQ (ENSCGOG00000011503) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b European seabass MODERN SPECIES 6 slc6a3 (ENSDLAG00005013489) DCDC2 (ENSDLAG00005026563) nrsn1 (ENSDLAG00005032271) ENSDLAG00005013434 ENSDLAG00005013418 sox4b (ENSDLAG00005028717) CDKAL1 (ENSDLAG00005013192) E2F3 (ENSDLAG00005028801) MBOAT1 (ENSDLAG00005013074) ENSDLAG00005013068 ENSDLAG00005011341 ENSDLAG00005011289 MAL2 (ENSDLAG00005011274) #20 ENSDLAG00005011265 ENSDLAG00005011253 #21 TNFRSF11B (ENSDLAG00005033886) #22 ENSDLAG00005010952 ENSDLAG00005010918 ENSDLAG00005010822 #19 ENSDLAG00005031520 ENSDLAG00005010770 #12 ENSDLAG00005031405 #11 ENSDLAG00005010669 ENSDLAG00005027731 ENSDLAG00005010647 ENSDLAG00005010051 ENSDLAG00005009094 ENSDLAG00005029429 ENSDLAG00005009003 ENSDLAG00005008837 ENSDLAG00005008960 Large yellow croaker MODERN SPECIES 484 irx2a (ENSLCRG00005017881) irx4a (ENSLCRG00005017874) LPCAT1 (ENSLCRG00005017854) slc6a3 (ENSLCRG00005017387) DCDC2 (ENSLCRG00005017367) nrsn1 (ENSLCRG00005017362) sox4b (ENSLCRG00005017359) CDKAL1 (ENSLCRG00005017341) e2f3 (ENSLCRG00005017336) mboat1 (ENSLCRG00005017319) TMEM65 (ENSLCRG00005017317) MTSS1 (ENSLCRG00005017258) mal2 (ENSLCRG00005017206) #20 ENSLCRG00005017205 si:ch211-93i7.4 (ENSLCRG00005017202) #21 TNFRSF11B (ENSLCRG00005017197) #22 ENSLCRG00005017195 ##22 CARMIL1 (ENSLCRG00005016523) scgn (ENSLCRG00005016481) CCN3 (ENSLCRG00005016470) #19 ENSLCRG00005016465 sntb1 (ENSLCRG00005016459) #11 ENSLCRG00005016397 #12 ENSLCRG00005016375 ENSLCRG00005016333 ENSLCRG00005007690 ENSLCRG00005006925 CLPTM1L (ENSLCRG00005006921) MRS2 (ENSLCRG00005006915) ENSLCRG00005006902 CPQ (ENSLCRG00005006832) Gilthead seabream MODERN SPECIES 8 ENSSAUG00010021985 DCDC2 (ENSSAUG00010021987) nrsn1 (ENSSAUG00010021988) ENSSAUG00010021993 ENSSAUG00010021996 sox4b (ENSSAUG00010021998) CDKAL1 (ENSSAUG00010022000) ENSSAUG00010022001 E2F3 (ENSSAUG00010022002) mboat1 (ENSSAUG00010022004) TMEM65 (ENSSAUG00010022007) MTSS1 (ENSSAUG00010022012) mal2 (ENSSAUG00010022017) #20 CD209 (ENSSAUG00010022018) ENSSAUG00010022020 #21 TNFRSF11B (ENSSAUG00010022021) #22 ENSSAUG00010022022 ##22 CARMIL1 (ENSSAUG00010022047) scgn (ENSSAUG00010001683) CCN3 (ENSSAUG00010001720) #19 ENSSAUG00010001725 sntb1 (ENSSAUG00010001733) #11 ENSSAUG00010001757 #12 ENSSAUG00010001800 PTP4A3 (ENSSAUG00010001830) ENSSAUG00010001903 ENSSAUG00010003078 ENSSAUG00010012215 CLPTM1L (ENSSAUG00010012217) MRS2 (ENSSAUG00010012223) ENSSAUG00010012230 Ballan wrasse MODERN SPECIES 69 irx4a (ENSLBEG00000021844) LPCAT1 (ENSLBEG00000021887) slc6a3 (ENSLBEG00000021954) nrsn1 (ENSLBEG00000022002) ENSLBEG00000022163 sox4b (ENSLBEG00000022430) CDKAL1 (ENSLBEG00000022455) ENSLBEG00000022497 mboat1 (ENSLBEG00000022521) TMEM65 (ENSLBEG00000022553) MTSS1 (ENSLBEG00000022637) mal2 (ENSLBEG00000022749) #20 ENSLBEG00000022761 ENSLBEG00000022774 ENSLBEG00000022790 #21 TNFRSF11B (ENSLBEG00000022804) #22 ENSLBEG00000022820 ##22 CARMIL1 (ENSLBEG00000022854) scgn (ENSLBEG00000022946) CCN3 (ENSLBEG00000022979) #19 ENSLBEG00000022997 ENSLBEG00000023013 PTK2 (ENSLBEG00000023042) Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Zig-zag eel MODERN SPECIES 7 slc6a3 (ENSMAMG00000024023) DCDC2 (ENSMAMG00000024022) nrsn1 (ENSMAMG00000024021) ENSMAMG00000024018 ENSMAMG00000024019 ENSMAMG00000024020 ENSMAMG00000024916 sox4b (ENSMAMG00000024017) CDKAL1 (ENSMAMG00000024016) E2F3 (ENSMAMG00000024015) MBOAT1 (ENSMAMG00000024014) TMEM65 (ENSMAMG00000025377) ENSMAMG00000024012 MAL2 (ENSMAMG00000024467) #20 ENSMAMG00000026125 #21 TNFRSF11B (ENSMAMG00000024009) #22 ENSMAMG00000024008 ##22 ENSMAMG00000024007 ENSMAMG00000024006 ENSMAMG00000024005 #19 ENSMAMG00000026078 ENSMAMG00000024003 #11 ENSMAMG00000024002 #12 ENSMAMG00000024001 ENSMAMG00000025894 ENSMAMG00000023999 ENSMAMG00000023998 ENSMAMG00000023997 ENSMAMG00000023996 ENSMAMG00000023995 ENSMAMG00000023994 Anabantoidei ANCESTRAL SPECIES 3 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Siamese fighting fish MODERN SPECIES 7 irx2a (ENSBSLG00000018817) irx4a (ENSBSLG00000018764) LPCAT1 (ENSBSLG00000018557) slc6a3 (ENSBSLG00000017958) ENSBSLG00000017917 nrsn1 (ENSBSLG00000017902) ENSBSLG00000017888 sox4b (ENSBSLG00000017876) CDKAL1 (ENSBSLG00000017574) E2F3 (ENSBSLG00000017543) mboat1 (ENSBSLG00000017351) ENSBSLG00000017334 MTSS1 (ENSBSLG00000016789) mal2 (ENSBSLG00000016628) #20 si:ch211-93i7.4 (ENSBSLG00000016597) #21 TNFRSF11B (ENSBSLG00000015636) #22 ENSBSLG00000015630 ##22 CARMIL1 (ENSBSLG00000014631) scgn (ENSBSLG00000014553) CCN3 (ENSBSLG00000014184) #19 ENSBSLG00000014147 sntb1 (ENSBSLG00000014136) #11 ENSBSLG00000026082 #12 ENSBSLG00000026018 PTP4A3 (ENSBSLG00000025965) ndrg1b (ENSBSLG00000025549) ENSBSLG00000024186 ENSBSLG00000023993 MRS2 (ENSBSLG00000023966) ENSBSLG00000023957 CPQ (ENSBSLG00000023912) Climbing perch MODERN SPECIES 7 ENSATEG00000024162 slc6a3 (ENSATEG00000024157) DCDC2 (ENSATEG00000028429) nrsn1 (ENSATEG00000024148) ENSATEG00000024141 ENSATEG00000024120 sox4b (ENSATEG00000024103) CDKAL1 (ENSATEG00000024092) E2F3 (ENSATEG00000024083) MBOAT1 (ENSATEG00000024078) ENSATEG00000024074 ENSATEG00000024064 MAL2 (ENSATEG00000024059) #20 ENSATEG00000024057 ENSATEG00000024053 #21 TNFRSF11B (ENSATEG00000024050) #22 ENSATEG00000024046 ##22 ENSATEG00000024023 ENSATEG00000024010 ENSATEG00000024003 #19 ENSATEG00000024001 ENSATEG00000023994 #11 ENSATEG00000023980 #12 ENSATEG00000023974 ENSATEG00000023965 ENSATEG00000023959 ENSATEG00000023925 ENSATEG00000023908 ENSATEG00000023901 ENSATEG00000023896 ENSATEG00000028035 Carangaria ANCESTRAL SPECIES 1 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Carangaria_A ANCESTRAL SPECIES 9 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Barramundi perch MODERN SPECIES 17 LPCAT1 (ENSLCAG00010018686) slc6a3 (ENSLCAG00010018706) ENSLCAG00010001765 nrsn1 (ENSLCAG00010001769) ENSLCAG00010001781 CDKAL1 (ENSLCAG00010001811) sox4b (ENSLCAG00010001830) E2F3 (ENSLCAG00010001834) mboat1 (ENSLCAG00010001847) TMEM65 (ENSLCAG00010001860) MTSS1 (ENSLCAG00010001864) mal2 (ENSLCAG00010001879) #20 ENSLCAG00010001892 ENSLCAG00010001895 si:ch211-93i7.4 (ENSLCAG00010001901) #21 TNFRSF11B (ENSLCAG00010001905) #22 ENSLCAG00010001912 ##22 CARMIL1 (ENSLCAG00010002103) scgn (ENSLCAG00010002706) CCN3 (ENSLCAG00010002715) #19 ENSLCAG00010002719 ENSLCAG00010002721 sntb1 (ENSLCAG00010002724) #11 ENSLCAG00010002726 #12 ZFAT (ENSLCAG00010002738) PTP4A3 (ENSLCAG00010002761) ENSLCAG00010002773 ENSLCAG00010003085 ENSLCAG00010004567 CLPTM1L (ENSLCAG00010004569) MRS2 (ENSLCAG00010004575) Seriola ANCESTRAL SPECIES 16 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00940000155356.d.b.b.b.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Greater amberjack MODERN SPECIES 75 irx4a (ENSSDUG00000015004) LPCAT1 (ENSSDUG00000015038) slc6a3 (ENSSDUG00000015097) nrsn1 (ENSSDUG00000015122) ENSSDUG00000015132 sox4b (ENSSDUG00000015143) CDKAL1 (ENSSDUG00000015207) ENSSDUG00000015311 E2F3 (ENSSDUG00000015325) mboat1 (ENSSDUG00000015361) TMEM65 (ENSSDUG00000015376) MTSS1 (ENSSDUG00000015414) mal2 (ENSSDUG00000015527) #20 ENSSDUG00000015539 COLEC10 (ENSSDUG00000015548) #21 TNFRSF11B (ENSSDUG00000015579) #22 ENSSDUG00000015592 ##22 CARMIL1 (ENSSDUG00000015617) ENSSDUG00000015672 scgn (ENSSDUG00000015705) CCN3 (ENSSDUG00000015746) #19 ENSSDUG00000015769 sntb1 (ENSSDUG00000015780) #11 ENSSDUG00000015832 #12 ENSSDUG00000015868 PTP4A3 (ENSSDUG00000015910) ndrg1b (ENSSDUG00000015947) ENSSDUG00000016275 ENSSDUG00000016341 CLPTM1L (ENSSDUG00000016354) MRS2 (ENSSDUG00000016372) Yellowtail amberjack MODERN SPECIES 2813 ENSSLDG00000021766 E2F3 (ENSSLDG00000021770) mboat1 (ENSSLDG00000021779) TMEM65 (ENSSLDG00000021793) MTSS1 (ENSSLDG00000021815) mal2 (ENSSLDG00000021927) #20 ENSSLDG00000021932 COLEC10 (ENSSLDG00000021941) #21 TNFRSF11B (ENSSLDG00000021949) #22 ENSSLDG00000021956 ##22 CARMIL1 (ENSSLDG00000021966) ENSSLDG00000022078 scgn (ENSSLDG00000022085) CCN3 (ENSSLDG00000022098) #19 ENSSLDG00000022116 sntb1 (ENSSLDG00000022129) #11 ENSSLDG00000022154 #12 ENSSLDG00000022185 PTP4A3 (ENSSLDG00000022207) ndrg1b (ENSSLDG00000022225) ENSSLDG00000022243 ENSSLDG00000022284 ENSSLDG00000022292 MRS2 (ENSSLDG00000022317) Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Tongue sole MODERN SPECIES 4 ENSCSEG00000004026 sox4b (ENSCSEG00000004025) nrsn1 (ENSCSEG00000004021) DCDC2 (ENSCSEG00000004017) slc6a3 (ENSCSEG00000004002) LPCAT1 (ENSCSEG00000003975) irx4a (ENSCSEG00000003963) irx2a (ENSCSEG00000003955) irx1a (ENSCSEG00000003947) ADAMTS16 (ENSCSEG00000003913) ENSCSEG00000003893 ENSCSEG00000003887 ADCY2 (ENSCSEG00000003855) mal2 (ENSCSEG00000003844) #20 ENSCSEG00000003841 #21 TNFRSF11B (ENSCSEG00000003835) #22 ENSCSEG00000003830 ##22 CARMIL1 (ENSCSEG00000003813) scgn (ENSCSEG00000003802) CCN3 (ENSCSEG00000003798) #19 ENSCSEG00000003793 ctnnb1 (ENSCSEG00000003769) ENSCSEG00000003765 TRAK1 (ENSCSEG00000003758) ccka (ENSCSEG00000003756) ENSCSEG00000003744 ENSCSEG00000003730 sult2st3 (ENSCSEG00000003725) tmem147 (ENSCSEG00000003720) ENSCSEG00000003716 gapdhs (ENSCSEG00000003701) Turbot MODERN SPECIES irx2a (ENSSMAG00000022904) irx4a (ENSSMAG00000003773) ENSSMAG00000003739 slc6a3 (ENSSMAG00000003672) DCDC2 (ENSSMAG00000003653) nrsn1 (ENSSMAG00000003641) sox4b (ENSSMAG00000003637) CDKAL1 (ENSSMAG00000003573) E2F3 (ENSSMAG00000003546) MBOAT1 (ENSSMAG00000003534) ENSSMAG00000003513 ENSSMAG00000003409 MAL2 (ENSSMAG00000032230) #20 ENSSMAG00000003386 ENSSMAG00000003375 #21 TNFRSF11B (ENSSMAG00000003343) #22 ENSSMAG00000003338 ENSSMAG00000003265 ENSSMAG00000003216 ENSSMAG00000024100 #19 ENSSMAG00000003199 ENSSMAG00000003162 #11 ENSSMAG00000003140 #12 ENSSMAG00000003093 ENSSMAG00000003059 ENSSMAG00000003027 ENSSMAG00000002721 ENSSMAG00000002665 ENSSMAG00000002646 ENSSMAG00000035925 ENSSMAG00000002628 Pinecone sodierfish MODERN SPECIES 7 LPCAT1 (ENSMMDG00005024104) slc6a3 (ENSMMDG00005024105) DCDC2 (ENSMMDG00005024107) nrsn1 (ENSMMDG00005024108) ENSMMDG00005001206 ENSMMDG00005001972 sox4b (ENSMMDG00005017419) CDKAL1 (ENSMMDG00005017430) E2F3 (ENSMMDG00005017765) mboat1 (ENSMMDG00005017770) TMEM65 (ENSMMDG00005017776) MTSS1 (ENSMMDG00005017778) mal2 (ENSMMDG00005017782) #20 ENSMMDG00005017783 si:ch211-93i7.4 (ENSMMDG00005017785) #21 TNFRSF11B (ENSMMDG00005017788) #22 ENSMMDG00005017790 ##22 ENSMMDG00005017791 CARMIL1 (ENSMMDG00005017797) scgn (ENSMMDG00005017868) CCN3 (ENSMMDG00005017885) #19 CCN3 (ENSMMDG00005018075) #19 enpp2 (ENSMMDG00005018081) ##18 taf2 (ENSMMDG00005018110) #17 cndp1 (ENSMMDG00005018634) ABHD5 (ENSMMDG00005018647) ano10a (ENSMMDG00005018693) snrka (ENSMMDG00005019102) pomgnt2 (ENSMMDG00005019104) GASK1A (ENSMMDG00005019106) tgfbr2b (ENSMMDG00005019122) Cod MODERN SPECIES 2 hspb6 (ENSGMOG00000030343) psenen (ENSGMOG00000028309) ENSGMOG00000025732 ENSGMOG00000000123 ENSGMOG00000037092 ENSGMOG00000000126 ENSGMOG00000000135 kirrel3l (ENSGMOG00000000138) ENSGMOG00000000162 ENSGMOG00000009368 ENSGMOG00000005006 ENSGMOG00000005072 ENSGMOG00000017119 MAL2 (ENSGMOG00000016900) #20 ENSGMOG00000016906 #21 TNFRSF11B (ENSGMOG00000005446) #22 ENSGMOG00000018918 ENSGMOG00000005393 ENSGMOG00000002320 si:ch211-151o1.4 (ENSGMOG00000035727) ENSGMOG00000035237 elovl4a (ENSGMOG00000002373) ENSGMOG00000002471 ENSGMOG00000002517 ENSGMOG00000002660 ENSGMOG00000002787 ENSGMOG00000026115 ENSGMOG00000002804 ENSGMOG00000027675 #25 rad21a (ENSGMOG00000003193) #28 eif3ha (ENSGMOG00000003373) #30 Spotted gar MODERN SPECIES 649 derl1 (ENSLOCG00000009243) #8 zhx2a (ENSLOCG00000018339) #9 has2 (ENSLOCG00000009236) #10 sntb1 (ENSLOCG00000009223) #11 MTBP (ENSLOCG00000009214) #12 mrpl13 (ENSLOCG00000009210) #13 COL14A1 (ENSLOCG00000009194) #14 deptor (ENSLOCG00000009183) #15 dscc1 (ENSLOCG00000009176) #16 taf2 (ENSLOCG00000009156) #17 ENPP2 (ENSLOCG00000009138) #18 ENSLOCG00000009125 CCN3 (ENSLOCG00000009114) #19 mal2 (ENSLOCG00000009108) #20 si:ch211-93i7.4 (ENSLOCG00000009099) #21 TNFRSF11B (ENSLOCG00000009086) #22 ENSLOCG00000009079 ##22 CARMIL1 (ENSLOCG00000009062) scgn (ENSLOCG00000009052) MTSS1 (ENSLOCG00000009035) ndufb9 (ENSLOCG00000009028) tatdn1 (ENSLOCG00000009012) rnf139 (ENSLOCG00000009007) tmem65 (ENSLOCG00000008994) ENSLOCG00000008963 mboat1 (ENSLOCG00000008952) e2f3 (ENSLOCG00000008942) CDKAL1 (ENSLOCG00000008933) sox4b (ENSLOCG00000018338) nrsn1l (ENSLOCG00000008928) DCDC2 (ENSLOCG00000008919) Reedfish MODERN SPECIES 4 mc2r (ENSECRG00000014695) rnmt (ENSECRG00000021384) fam210aa (ENSECRG00000021369) ENSECRG00000021326 ENSECRG00000021300 scgn (ENSECRG00000021285) ripor2 (ENSECRG00000021255) gmnn (ENSECRG00000021235) zgc:111986 (ENSECRG00000021221) acot13 (ENSECRG00000021209) tdp2b (ENSECRG00000021171) aldh5a1 (ENSECRG00000021146) KDM1B (ENSECRG00000021122) DEK (ENSECRG00000021094) si:ch211-93i7.4 (ENSECRG00000021082) #21 TNFRSF11B (ENSECRG00000021019) #22 ENSECRG00000020975 ##22 SAMD12 (ENSECRG00000020950) #23 ext1b (ENSECRG00000020881) #25 med30 (ENSECRG00000020834) #26 SLC30A8 (ENSECRG00000020816) ENSECRG00000020797 ENSECRG00000020776 rad21a (ENSECRG00000020756) #28 utp23 (ENSECRG00000020746) #29 eif3ha (ENSECRG00000020438) #30 trps1 (ENSECRG00000020383) #31 CSMD3 (ENSECRG00000020311) #36 ENSECRG00000020245 MLH1 (ENSECRG00000020228) TRANK1 (ENSECRG00000020183) Elephant shark MODERN SPECIES 1672 sntb1 (ENSCMIG00000010570) #11 MTBP (ENSCMIG00000010576) #12 mrpl13 (ENSCMIG00000010580) #13 COL14A1 (ENSCMIG00000010673) #14 deptor (ENSCMIG00000010920) #15 dscc1 (ENSCMIG00000010923) #16 taf2 (ENSCMIG00000010987) #17 ENPP2 (ENSCMIG00000011162) #18 CCN3 (ENSCMIG00000011184) #19 MAL2 (ENSCMIG00000011187) #20 si:ch211-93i7.4 (ENSCMIG00000011189) #21 ENSCMIG00000011193 #22 ENSCMIG00000011200 ##22 sqlea (ENSCMIG00000011211) washc5 (ENSCMIG00000011281) Gnathostomata ANCESTRAL SPECIES 224 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 Euteleostomi ANCESTRAL SPECIES 72 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Actinopterygii ANCESTRAL SPECIES 88 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT01030000235077 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Neopterygii ANCESTRAL SPECIES 23 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00940000153769.F.m #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00940000155112.B ENSGT00950000183108.a ENSGT00950000183156.a.b.b.b.b.a ENSGT00390000005809 ENSGT00960000187692 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802 ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b ENSGT00940000159377 ENSGT00940000161224 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 44 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00940000153769.F.m #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000158596.a.a ENSGT00940000161198 ENSGT00940000160429.h.a ENSGT00940000159433 Clupeocephala ANCESTRAL SPECIES 24 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000158596.a.a ENSGT00940000161198 Otomorpha ANCESTRAL SPECIES 161 ENSGT00940000164547.b.b ENSGT00940000157621 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000158596.a.a ENSGT00940000161198 Otophysi ANCESTRAL SPECIES 58 ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00940000161470.a.b.d ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000158596.a.a Characiphysae ANCESTRAL SPECIES 49 ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00500000044904.a.b.i.b ENSGT00940000155952 ENSGT00940000161470.a.b.d ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000158596.a.a ENSGT00940000161198 Characiphysae_b ANCESTRAL SPECIES 99 ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ENSGT00940000155533.d ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00500000044904.a.b.i.b Electric eel MODERN SPECIES 543 CCN3 (ENSEEEG00000001102) #19 mal2 (ENSEEEG00000001103) #20 si:ch211-93i7.4 (ENSEEEG00000001105) #21 TNFRSF11B (ENSEEEG00000001111) #22 ENSEEEG00000001115 ##22 CARMIL1 (ENSEEEG00000001127) scgn (ENSEEEG00000001129) MTSS1 (ENSEEEG00000001130) TMEM65 (ENSEEEG00000001131) mboat1 (ENSEEEG00000001132) ENSEEEG00000001137 ENSEEEG00000001138 ENSEEEG00000001139 Channel catfish MODERN SPECIES PTPN6 (ENSIPUG00000000054) ENSIPUG00000000055 ENSIPUG00000000056 ENSIPUG00000000057 wnt4b (ENSIPUG00000000059) phc1 (ENSIPUG00000000060) rps9 (ENSIPUG00000000061) ENSIPUG00000000062 ENSIPUG00000000063 ENSIPUG00000000064 rbfox1l (ENSIPUG00000000065) CCN3 (ENSIPUG00000000066) #19 MAL2 (ENSIPUG00000000067) #20 si:ch211-93i7.4 (ENSIPUG00000000068) #21 TNFRSF11B (ENSIPUG00000000069) #22 ENSIPUG00000000070 ##22 CARMIL1 (ENSIPUG00000000071) scgn (ENSIPUG00000000072) MTSS1 (ENSIPUG00000000073) ENSIPUG00000000074 TMEM65 (ENSIPUG00000000075) ENSIPUG00000000076 ENSIPUG00000000077 Mboat1 (ENSIPUG00000000078) e2f3 (ENSIPUG00000000079) ENSIPUG00000000080 ENSIPUG00000000081 ENSIPUG00000000082 ENSIPUG00000000083 cdkal1 (ENSIPUG00000000084) ENSIPUG00000000085 Cyprinoidei ANCESTRAL SPECIES 86 ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00390000018360.a ENSGT00940000157873.c ENSGT00390000018878 ENSGT00940000156893 ENSGT00390000002049.d ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006.m ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 Cyprininae ANCESTRAL SPECIES 295 ENSGT00390000012959.b.g ENSGT00390000006983.a.b.a ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l ENSGT00940000171486.A.c ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a ENSGT01030000234564.a.a.a.a.a ENSGT00940000159514.j #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.f #22 ENSGT00940000155167.b.a.a ##22 Cyprininae_a ANCESTRAL SPECIES 244 ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k ENSGT00940000158341.b.e ENSGT00390000014772.l.e ENSGT00940000171486.A.c ENSGT00940000171486.A.d ENSGT00940000156787 ENSGT00940000156446 ENSGT00940000159356.a.a.a ENSGT01030000234564.a.a.a.a.a ENSGT00390000005809 ENSGT00940000159514.j #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.f #22 ENSGT00940000155167.b.a.a ##22 Common carp reference MODERN SPECIES 2 ENSCCRG00000058119 ENSCCRG00000078139 ENSCCRG00000060210 ENSCCRG00000077379 ENSCCRG00000068453 ENSCCRG00000060720 mboat1 (ENSCCRG00000069910) ENSCCRG00000077810 ENSCCRG00000065326 MAL2 (ENSCCRG00000081062) #20 ENSCCRG00000042635 #21 ENSCCRG00000080019 ENSCCRG00000080129 ENSCCRG00000038184 TNFRSF11B (ENSCCRG00000053689) #22 ENSCCRG00000079381 ##22 Golden-line barbel MODERN SPECIES 2635 ENSSGRG00000010502 ##22 Clupeiformes ANCESTRAL SPECIES 83 ENSGT00940000164547.b.b ENSGT00940000157621 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00530000063085.A.a ENSGT00950000183156.a.b.b.b.b.a.d ENSGT00390000017802.d ENSGT00390000004428.a.a ENSGT00390000007463 ENSGT00940000161116.w.a ENSGT00390000017548.b.a ENSGT00940000156691 ENSGT00390000003070.a.a ENSGT00940000160116.b ENSGT00950000183157.a.a.a.a ENSGT00390000011615.A.a ENSGT00940000159620.b.a Atlantic herring MODERN SPECIES ENSCHAG00000009942 ENSCHAG00000009934 ANKIB1 (ENSCHAG00000009889) has2 (ENSCHAG00000009866) #10 sntb1 (ENSCHAG00000009846) #11 MTBP (ENSCHAG00000009815) #12 mrpl13 (ENSCHAG00000009796) #13 COL14A1 (ENSCHAG00000008314) #14 deptor (ENSCHAG00000008201) #15 dscc1 (ENSCHAG00000008126) #16 taf2 (ENSCHAG00000005735) #17 enpp2 (ENSCHAG00000003581) ##18 CCN3 (ENSCHAG00000003088) #19 ENSCHAG00000002997 #21 TNFRSF11B (ENSCHAG00000002978) #22 ENSCHAG00000002964 ##22 CARMIL1 (ENSCHAG00000000278) scgn (ENSCHAG00000000098) ENSCHAG00000000093 MTSS1 (ENSCHAG00000000088) TMEM65 (ENSCHAG00000000084) zgc:112148 (ENSCHAG00000000080) ENSCHAG00000000077 ENSCHAG00000027564 USH1G (ENSCHAG00000027562) OTOP2 (ENSCHAG00000027557) HID1 (ENSCHAG00000027551) ENSCHAG00000027547 fscn2a (ENSCHAG00000027545) ENSCHAG00000027544 SOCS3 (ENSCHAG00000027543) Denticle herring MODERN SPECIES 17 has2 (ENSDCDG00000021114) #10 sntb1 (ENSDCDG00000021117) #11 MTBP (ENSDCDG00000021125) #12 mrpl13 (ENSDCDG00000021151) #13 COL14A1 (ENSDCDG00000021256) #14 deptor (ENSDCDG00000025350) #15 dscc1 (ENSDCDG00000025364) #16 taf2 (ENSDCDG00000025419) #17 enpp2 (ENSDCDG00000026782) ##18 CCN3 (ENSDCDG00000029036) #19 ENSDCDG00000029038 ENSDCDG00000029039 mal2 (ENSDCDG00000029044) #20 si:ch211-93i7.4 (ENSDCDG00000029046) #21 TNFRSF11B (ENSDCDG00000029049) #22 ENSDCDG00000029054 ##22 CARMIL1 (ENSDCDG00000005468) scgn (ENSDCDG00000013341) ENSDCDG00000013364 MTSS1 (ENSDCDG00000013394) TMEM65 (ENSDCDG00000013466) zgc:112148 (ENSDCDG00000013485) ENSDCDG00000013498 ENSDCDG00000013508 USH1G (ENSDCDG00000013514) OTOP2 (ENSDCDG00000013529) HID1 (ENSDCDG00000013564) ENSDCDG00000013640 fscn2a (ENSDCDG00000013684) birc5a (ENSDCDG00000013687) SOCS3 (ENSDCDG00000013688) Euteleosteomorpha ANCESTRAL SPECIES 77 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000177739 ENSGT00940000179084 ENSGT00940000158596.a.a Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000155721.b.b ENSGT00390000012690.a Salmoninae ANCESTRAL SPECIES 2 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c ENSGT01030000234574.A.a.e.a ENSGT00940000155721.b.b Huchen MODERN SPECIES 9606 ENSHHUG00000040468 ##22 Salmoninae_a ANCESTRAL SPECIES 53 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c ENSGT01030000234574.A.a.e.a ENSGT00940000155721.b.b Oncorhynchus ANCESTRAL SPECIES 50 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.c #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.b ENSGT00940000155112.B.a.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b.f.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.b ENSGT00940000161470.a.a ENSGT00940000155025.A.r ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224.c ENSGT01030000234574.A.a.e.a Oncorhynchus_a ANCESTRAL SPECIES 101 ENSGT00390000010337.B.a.b #10 ENSGT01060000250439.b ENSGT00950000182863.A.b #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.g.a #15 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 31 ENSOKIG00005047893 ENSOKIG00005047896 sntb1 (ENSOKIG00005047905) #11 MTBP (ENSOKIG00005047920) #12 mrpl13 (ENSOKIG00005047934) #13 COL14A1 (ENSOKIG00005048051) #14 deptor (ENSOKIG00005048769) #15 dscc1 (ENSOKIG00005048820) #16 taf2 (ENSOKIG00005048929) #17 ENSOKIG00005049235 enpp2 (ENSOKIG00005049347) ##18 CCN3 (ENSOKIG00005049815) #19 mal2 (ENSOKIG00005049817) #20 si:ch211-93i7.4 (ENSOKIG00005049819) #21 TNFRSF11B (ENSOKIG00005049821) #22 ENSOKIG00005049827 ##22 CARMIL1 (ENSOKIG00005049853) ENSOKIG00005049975 TMEM65 (ENSOKIG00005049979) ENSOKIG00005049980 MTSS1 (ENSOKIG00005050000) SCGN (ENSOKIG00005050042) TMEM65 (ENSOKIG00005050059) mboat1 (ENSOKIG00005050073) E2F3 (ENSOKIG00005050089) ENSOKIG00005050091 sox4b (ENSOKIG00005050093) SOX4 (ENSOKIG00005050095) ENSOKIG00005050100 ENSOKIG00005050111 ENSOKIG00005050120 Coho salmon MODERN SPECIES 1291 deptor (ENSOKIG00005047742) #15 dscc1 (ENSOKIG00005047842) #16 taf2 (ENSOKIG00005047913) #17 ENSOKIG00005048255 enpp2 (ENSOKIG00005048317) ##18 CCN3 (ENSOKIG00005049018) #19 mal2 (ENSOKIG00005049023) #20 si:ch211-93i7.4 (ENSOKIG00005049027) #21 TNFRSF11B (ENSOKIG00005049031) #22 ENSOKIG00005049037 ##22 ENSOKIG00005049042 Chinook salmon MODERN SPECIES 1602 ENSOTSG00005020558 #22 ENSOTSG00005020559 ##22 Rainbow trout MODERN SPECIES 11 ENSOMYG00000061955 MTBP (ENSOMYG00000027394) #12 mrpl13 (ENSOMYG00000027326) #13 ENSOMYG00000050512 COL14A1 (ENSOMYG00000057449) #14 deptor (ENSOMYG00000025343) #15 dscc1 (ENSOMYG00000025144) #16 taf2 (ENSOMYG00000067404) #17 enpp2 (ENSOMYG00000024404) ##18 CCN3 (ENSOMYG00000076466) #19 mal2 (ENSOMYG00000076128) #20 si:ch211-93i7.4 (ENSOMYG00000028979) #21 ENSOMYG00000051749 ENSOMYG00000068866 TNFRSF11B (ENSOMYG00000053518) #22 ENSOMYG00000048320 ##22 ENSOMYG00000069508 ENSOMYG00000072640 ENSOMYG00000058184 ENSOMYG00000062944 ENSOMYG00000065426 ENSOMYG00000039282 ENSOMYG00000069638 MBOAT1 (ENSOMYG00000000834) E2F3 (ENSOMYG00000057430) ENSOMYG00000054723 ENSOMYG00000060234 ENSOMYG00000066416 ENSOMYG00000060216 ENSOMYG00000065364 CDKAL1 (ENSOMYG00000074184) Salmo ANCESTRAL SPECIES 52 ENSGT01060000250439 ENSGT00950000182863.A.b.f #11 ENSGT00390000003305.a #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n.c #14 ENSGT00940000153769.F.n.d #14 ENSGT00520000055667.g.b #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.B ##18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374.b #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a.a.b ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT01030000238736 ENSGT01090000260907 ENSGT00390000017802.d ENSGT01060000250608 ENSGT01030000234564.a.a.a.a.a.b ENSGT01030000234564.a.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00390000010145.c.a.`b.a.b.a ENSGT00390000010145.c.a.`b.a.a ENSGT00940000161470.a.a ENSGT00940000155025.A.r River trout DUPLICATION River trout MODERN SPECIES 631 zgc:194202 (ENSSTUG00000032842) mrpl13 (ENSSTUG00000032799) #13 COL14A1 (ENSSTUG00000031534) #14 deptor (ENSSTUG00000031306) #15 dscc1 (ENSSTUG00000031290) #16 taf2 (ENSSTUG00000029718) #17 ENSSTUG00000029671 enpp2 (ENSSTUG00000029111) ##18 CCN3 (ENSSTUG00000029093) #19 mal2 (ENSSTUG00000029083) #20 si:ch211-93i7.4 (ENSSTUG00000029063) #21 TNFRSF11B (ENSSTUG00000029050) #22 ENSSTUG00000042603 ##22 ENSSTUG00000042583 CARMIL1 (ENSSTUG00000040055) scgn (ENSSTUG00000039917) ENSSTUG00000039914 MTSS1 (ENSSTUG00000039708) ENSSTUG00000039701 TMEM65 (ENSSTUG00000039687) ENSSTUG00000039685 TMEM65 (ENSSTUG00000039679) ENSSTUG00000039673 ENSSTUG00000039662 MTSS1 (ENSSTUG00000039646) River trout MODERN SPECIES 158 MTBP (ENSSTUG00000020408) #12 mrpl13 (ENSSTUG00000020565) #13 COL14A1 (ENSSTUG00000020764) #14 ENSSTUG00000025936 deptor (ENSSTUG00000025942) #15 dscc1 (ENSSTUG00000026004) #16 taf2 (ENSSTUG00000026111) #17 enpp2 (ENSSTUG00000027432) ##18 CCN3 (ENSSTUG00000027956) #19 ENSSTUG00000027962 mal2 (ENSSTUG00000027966) #20 si:ch211-93i7.4 (ENSSTUG00000027979) #21 TNFRSF11B (ENSSTUG00000027996) #22 ENSSTUG00000028015 ##22 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 24 has2 (ENSSSAG00000105909) #10 sntb1 (ENSSSAG00000106832) #11 ENSSSAG00000109630 MTBP (ENSSSAG00000087925) #12 mrpl13 (ENSSSAG00000002931) #13 COL14A1 (ENSSSAG00000120448) #14 ENSSSAG00000117573 deptor (ENSSSAG00000088901) #15 dscc1 (ENSSSAG00000104335) #16 taf2 (ENSSSAG00000118190) #17 ENSSSAG00000036921 ##18 CCN3 (ENSSSAG00000038088) #19 si:ch211-93i7.4 (ENSSSAG00000108018) #21 TNFRSF11B (ENSSSAG00000105508) #22 ENSSSAG00000037747 ENSSSAG00000092401 ##22 ENSSSAG00000090807 segn (ENSSSAG00000036507) ENSSSAG00000121994 ENSSSAG00000099112 ENSSSAG00000105113 ENSSSAG00000119838 ENSSSAG00000108491 MBOAT1 (ENSSSAG00000114047) ENSSSAG00000108855 CDKAL1 (ENSSSAG00000103459) ENSSSAG00000115086 ENSSSAG00000105165 ENSSSAG00000086873 ENSSSAG00000115588 ENSSSAG00000112814 Atlantic salmon MODERN SPECIES 11 TBC1D31 (ENSSSAG00000108038) #7 ENSSSAG00000046775 has2 (ENSSSAG00000092898) #10 sntb1 (ENSSSAG00000118778) #11 MTBP (ENSSSAG00000105331) #12 mrpl13 (ENSSSAG00000102301) #13 ENSSSAG00000095408 COL14A1 (ENSSSAG00000108222) #14 deptor (ENSSSAG00000094475) #15 dscc1 (ENSSSAG00000088925) #16 taf2 (ENSSSAG00000087825) #17 ENSSSAG00000095772 ##18 CCN3 (ENSSSAG00000119232) #19 si:ch211-93i7.4 (ENSSSAG00000011938) #21 TNFRSF11B (ENSSSAG00000046727) #22 ENSSSAG00000099084 ##22 ENSSSAG00000059768 ENSSSAG00000093282 ENSSSAG00000116949 ENSSSAG00000113655 ENSSSAG00000118072 ENSSSAG00000104318 ENSSSAG00000120938 MBOAT1 (ENSSSAG00000039058) E2F3 (ENSSSAG00000103911) ENSSSAG00000100768 cdkal (ENSSSAG00000100296) ENSSSAG00000052293 ENSSSAG00000106388 sox4 (ENSSSAG00000112690) ENSSSAG00000112254 Northern pike DUPLICATION Northern pike MODERN SPECIES 15 sntb1 (ENSELUG00000023160) #11 MTBP (ENSELUG00000023257) #12 mrpl13 (ENSELUG00000023304) #13 COL14A1 (ENSELUG00000023377) #14 ENSELUG00000028160 ENSELUG00000034146 deptor (ENSELUG00000023449) #15 dscc1 (ENSELUG00000023509) #16 taf2 (ENSELUG00000023605) #17 enpp2 (ENSELUG00000023691) ##18 CCN3 (ENSELUG00000024180) #19 TNFRSF11B (ENSELUG00000024329) #22 mal2 (ENSELUG00000024226) #20 si:ch211-93i7.4 (ENSELUG00000024237) #21 ENSELUG00000030865 ##22 ENSELUG00000024407 ##22 CARMIL1 (ENSELUG00000024518) ENSELUG00000024565 LPCAT1 (ENSELUG00000002646) slc6a3 (ENSELUG00000002666) DCDC2 (ENSELUG00000002678) nrsn1 (ENSELUG00000002687) ENSELUG00000002690 sox4b (ENSELUG00000002697) ENSELUG00000002700 CDKAL1 (ENSELUG00000002713) ENSELUG00000002704 E2F3 (ENSELUG00000002725) mboat1 (ENSELUG00000002730) TMEM65 (ENSELUG00000002737) MTSS1 (ENSELUG00000002757) Northern pike MODERN SPECIES 15 has2 (ENSELUG00000023115) #10 sntb1 (ENSELUG00000023160) #11 MTBP (ENSELUG00000023257) #12 mrpl13 (ENSELUG00000023304) #13 COL14A1 (ENSELUG00000023377) #14 ENSELUG00000028160 ENSELUG00000034146 deptor (ENSELUG00000023449) #15 dscc1 (ENSELUG00000023509) #16 taf2 (ENSELUG00000023605) #17 enpp2 (ENSELUG00000023691) ##18 CCN3 (ENSELUG00000024180) #19 TNFRSF11B (ENSELUG00000024329) #22 mal2 (ENSELUG00000024226) #20 si:ch211-93i7.4 (ENSELUG00000024237) #21 ENSELUG00000030865 ##22 ENSELUG00000024407 ##22 CARMIL1 (ENSELUG00000024518) ENSELUG00000024565 LPCAT1 (ENSELUG00000002646) slc6a3 (ENSELUG00000002666) DCDC2 (ENSELUG00000002678) nrsn1 (ENSELUG00000002687) ENSELUG00000002690 sox4b (ENSELUG00000002697) ENSELUG00000002700 CDKAL1 (ENSELUG00000002713) ENSELUG00000002704 E2F3 (ENSELUG00000002725) mboat1 (ENSELUG00000002730) TMEM65 (ENSELUG00000002737) Acanthomorphata ANCESTRAL SPECIES 306 ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000162635 ENSGT00940000155112.B.a ENSGT00950000183108.a.c Euacanthomorphacea ANCESTRAL SPECIES 71 ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00940000159963 #19 Percomorphaceae ANCESTRAL SPECIES ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 Tiger tail seahorse MODERN SPECIES 208 LRRFIP1 (ENSHCOG00000010534) ENSHCOG00000010582 ENSHCOG00000000330 ENSHCOG00000010636 CDKAL1 (ENSHCOG00000000332) E2F3 (ENSHCOG00000010670) ENSHCOG00000010675 mboat1 (ENSHCOG00000010922) TMEM65 (ENSHCOG00000010948) MTSS1 (ENSHCOG00000010969) mal2 (ENSHCOG00000010975) #20 ENSHCOG00000010989 ENSHCOG00000010997 COLEC10 (ENSHCOG00000011065) #21 TNFRSF11B (ENSHCOG00000011118) #22 ENSHCOG00000011138 ##22 CARMIL1 (ENSHCOG00000011155) scgn (ENSHCOG00000011179) CCN3 (ENSHCOG00000011418) #19 sntb1 (ENSHCOG00000011459) #11 ENSHCOG00000011582 #12 ENSHCOG00000011612 ENSHCOG00000011623 ndrg1b (ENSHCOG00000011633) ENSHCOG00000011686 ENSHCOG00000011697 CLPTM1L (ENSHCOG00000000747) ENSHCOG00000011769 MRS2 (ENSHCOG00000011796) ENSHCOG00000011808 ENSHCOG00000011825 Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Ovalentaria ANCESTRAL SPECIES 3 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Oryzias ANCESTRAL SPECIES 2 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 ENSGT00390000001515 #13 Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 ENSGT00390000001515 #13 Indian medaka DUPLICATION Indian medaka MODERN SPECIES 5 irx4a (ENSOMEG00000000923) LPCAT1 (ENSOMEG00000013762) slc6a3 (ENSOMEG00000013700) ENSOMEG00000013653 nrsn1 (ENSOMEG00000013622) yipf2 (ENSOMEG00000013568) sox4b (ENSOMEG00000013539) CDKAL1 (ENSOMEG00000013480) E2F3 (ENSOMEG00000013401) mboat1 (ENSOMEG00000013368) TMEM65 (ENSOMEG00000013323) MTSS1 (ENSOMEG00000013271) mal2 (ENSOMEG00000013151) #20 si:ch211-93i7.4 (ENSOMEG00000013125) #21 TNFRSF11B (ENSOMEG00000013112) #22 ENSOMEG00000013098 ##22 ENSOMEG00000013077 ##22 CARMIL1 (ENSOMEG00000013048) scgn (ENSOMEG00000013000) CCN3 (ENSOMEG00000012898) #19 sntb1 (ENSOMEG00000012675) #11 ENSOMEG00000012611 #12 ENSOMEG00000012557 ENSOMEG00000012484 ndrg1b (ENSOMEG00000012420) ENSOMEG00000012259 ENSOMEG00000011904 MRS2 (ENSOMEG00000011853) ENSOMEG00000011802 ENSOMEG00000011783 dscc1 (ENSOMEG00000011757) #16 Indian medaka MODERN SPECIES 5 mrpl13 (ENSOMEG00000011732) #13 dscc1 (ENSOMEG00000011757) #16 ENSOMEG00000011783 ENSOMEG00000011802 MRS2 (ENSOMEG00000011853) ENSOMEG00000011904 ENSOMEG00000012259 ndrg1b (ENSOMEG00000012420) ENSOMEG00000012484 ENSOMEG00000012557 ENSOMEG00000012611 #12 sntb1 (ENSOMEG00000012675) #11 CCN3 (ENSOMEG00000012898) #19 scgn (ENSOMEG00000013000) CARMIL1 (ENSOMEG00000013048) ENSOMEG00000013077 ##22 ENSOMEG00000013098 ##22 TNFRSF11B (ENSOMEG00000013112) #22 si:ch211-93i7.4 (ENSOMEG00000013125) #21 mal2 (ENSOMEG00000013151) #20 MTSS1 (ENSOMEG00000013271) TMEM65 (ENSOMEG00000013323) mboat1 (ENSOMEG00000013368) E2F3 (ENSOMEG00000013401) CDKAL1 (ENSOMEG00000013480) sox4b (ENSOMEG00000013539) yipf2 (ENSOMEG00000013568) nrsn1 (ENSOMEG00000013622) ENSOMEG00000013653 slc6a3 (ENSOMEG00000013700) LPCAT1 (ENSOMEG00000013762) Javanese ricefish MODERN SPECIES 7 irx1a (ENSOJAG00000019942) irx2a (ENSOJAG00000019936) irx4a (ENSOJAG00000019927) LPCAT1 (ENSOJAG00000019608) slc6a3 (ENSOJAG00000018621) nrsn1 (ENSOJAG00000018497) sox4b (ENSOJAG00000018493) CDKAL1 (ENSOJAG00000018116) E2F3 (ENSOJAG00000018065) mboat1 (ENSOJAG00000018014) TMEM65 (ENSOJAG00000018004) MTSS1 (ENSOJAG00000017957) mal2 (ENSOJAG00000017944) #20 si:ch211-93i7.4 (ENSOJAG00000017933) #21 ENSOJAG00000017914 #22 ENSOJAG00000017901 ##22 CARMIL1 (ENSOJAG00000016246) scgn (ENSOJAG00000016099) CCN3 (ENSOJAG00000016093) #19 sntb1 (ENSOJAG00000015985) #11 ENSOJAG00000015971 #12 ENSOJAG00000015824 ENSOJAG00000015809 ndrg1b (ENSOJAG00000015527) ENSOJAG00000010756 ENSOJAG00000010177 MRS2 (ENSOJAG00000009982) ENSOJAG00000009966 CPQ (ENSOJAG00000009529) dscc1 (ENSOJAG00000009392) #16 mrpl13 (ENSOJAG00000009285) #13 Oryzias_a ANCESTRAL SPECIES 9 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 ENSGT00390000001515 #13 Japanese Medaka HdrR MODERN SPECIES 7 LPCAT1 (ENSORLG00000005120) slc6a3 (ENSORLG00000005085) DCDC2 (ENSORLG00000005024) nrsn1 (ENSORLG00000005016) ENSORLG00000027453 sox4b (ENSORLG00000005001) ENSORLG00000022696 CDKAL1 (ENSORLG00000004979) E2F3 (ENSORLG00000027588) mboat1 (ENSORLG00000004964) ENSORLG00000004954 MTSS1 (ENSORLG00000004945) mal2 (ENSORLG00000023500) #20 ENSORLG00000004920 #21 TNFRSF11B (ENSORLG00000004915) #22 opgb (ENSORLG00000004902) ##22 ENSORLG00000028861 ENSORLG00000025825 ENSORLG00000004892 ENSORLG00000004844 CCN3 (ENSORLG00000029702) #19 ENSORLG00000025758 ENSORLG00000025100 sntb1 (ENSORLG00000022473) #11 ENSORLG00000004821 #12 ENSORLG00000004805 ENSORLG00000004793 ENSORLG00000004785 ENSORLG00000004751 CLPTM1L (ENSORLG00000004721) MRS2 (ENSORLG00000004699) Chinese medaka MODERN SPECIES 3603 ENSOSIG00000002579 ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Poeciliinae ANCESTRAL SPECIES 22 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Poecilia ANCESTRAL SPECIES ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b NAME_6 ANCESTRAL SPECIES 197 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Amazon molly DUPLICATION Amazon molly MODERN SPECIES 523 mal2 (ENSPFOG00000008352) #20 COLEC10 (ENSPFOG00000008388) #21 TNFRSF11B (ENSPFOG00000008474) #22 ENSPFOG00000008555 ##22 TNFRSF11B (ENSPFOG00000022852) #22 ENSPFOG00000008573 ##22 CARMIL1 (ENSPFOG00000008604) scgn (ENSPFOG00000009307) CCN3 (ENSPFOG00000009446) #19 ENSPFOG00000022169 ENSPFOG00000024134 sntb1 (ENSPFOG00000009607) #11 ENSPFOG00000009740 #12 ENSPFOG00000009919 ENSPFOG00000010038 ndrg1b (ENSPFOG00000010083) ENSPFOG00000010090 ENSPFOG00000010095 ENSPFOG00000010111 Amazon molly MODERN SPECIES 523 mal2 (ENSPFOG00000008352) #20 COLEC10 (ENSPFOG00000008388) #21 TNFRSF11B (ENSPFOG00000008474) #22 ENSPFOG00000008555 ##22 TNFRSF11B (ENSPFOG00000022852) #22 ENSPFOG00000008573 ##22 CARMIL1 (ENSPFOG00000008604) scgn (ENSPFOG00000009307) CCN3 (ENSPFOG00000009446) #19 ENSPFOG00000022169 ENSPFOG00000024134 sntb1 (ENSPFOG00000009607) #11 ENSPFOG00000009740 #12 ENSPFOG00000009919 ENSPFOG00000010038 ndrg1b (ENSPFOG00000010083) ENSPFOG00000010090 ENSPFOG00000010095 ENSPFOG00000010111 MRS2 (ENSPFOG00000010268) ENSPFOG00000010425 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 4029 ENSPLAG00000004962 ##22 Sailfin molly MODERN SPECIES 4021 ENSPLAG00000009578 ##22 Guppy MODERN SPECIES 446 irx4a (ENSPREG00000011089) LPCAT1 (ENSPREG00000011063) slc6a3 (ENSPREG00000011037) DCDC2 (ENSPREG00000011016) nrsn1 (ENSPREG00000010983) sox4b (ENSPREG00000010954) CDKAL1 (ENSPREG00000010873) ENSPREG00000010836 ENSPREG00000010821 mboat1 (ENSPREG00000010764) TMEM65 (ENSPREG00000010739) MTSS1 (ENSPREG00000010677) mal2 (ENSPREG00000010576) #20 ENSPREG00000010482 #21 TNFRSF11B (ENSPREG00000010400) #22 ENSPREG00000010374 ##22 CARMIL1 (ENSPREG00000010301) scgn (ENSPREG00000010277) ENSPREG00000010273 CCN3 (ENSPREG00000010039) #19 ENSPREG00000009995 sntb1 (ENSPREG00000009976) #11 ENSPREG00000009877 #12 ZFAT (ENSPREG00000009790) ENSPREG00000009772 ndrg1b (ENSPREG00000009752) ENSPREG00000009701 ENSPREG00000009684 ENSPREG00000009608 MRS2 (ENSPREG00000009590) ENSPREG00000009583 Platyfish MODERN SPECIES 17 irx2a (ENSXMAG00000021240) irx4a (ENSXMAG00000005284) slc6a3 (ENSXMAG00000022758) ENSXMAG00000005263 nrsn1 (ENSXMAG00000005256) ENSXMAG00000009656 ENSXMAG00000023721 CDKAL1 (ENSXMAG00000009663) E2F3 (ENSXMAG00000021029) mboat1 (ENSXMAG00000009682) TMEM65 (ENSXMAG00000009701) MTSS1 (ENSXMAG00000009708) mal2 (ENSXMAG00000009738) #20 si:ch211-93i7.4 (ENSXMAG00000009740) #21 TNFRSF11B (ENSXMAG00000021500) #22 ENSXMAG00000009762 ##22 CARMIL1 (ENSXMAG00000007106) scgn (ENSXMAG00000007126) CCN3 (ENSXMAG00000027667) #19 ENSXMAG00000025094 ENSXMAG00000022539 sntb1 (ENSXMAG00000011008) #11 ENSXMAG00000010999 #12 ENSXMAG00000010993 ENSXMAG00000018281 ndrg1b (ENSXMAG00000010969) ENSXMAG00000010911 ENSXMAG00000010909 ENSXMAG00000030035 MRS2 (ENSXMAG00000010869) ENSXMAG00000022167 NAME_4 ANCESTRAL SPECIES 261 ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b.b ENSGT01040000240400.c.b.a.a.a.b.a Sheepshead minnow MODERN SPECIES 409 sox4b (ENSCVAG00000008594) CDKAL1 (ENSCVAG00000008636) E2F3 (ENSCVAG00000008651) mboat1 (ENSCVAG00000008669) TMEM65 (ENSCVAG00000008683) MTSS1 (ENSCVAG00000008767) mal2 (ENSCVAG00000008779) #20 si:ch211-93i7.4 (ENSCVAG00000008789) #21 TNFRSF11B (ENSCVAG00000008948) #22 ENSCVAG00000008984 ##22 Mummichog MODERN SPECIES 343 ENSFHEG00000016930 E2F3 (ENSFHEG00000016914) ENSFHEG00000016907 mboat1 (ENSFHEG00000016900) TMEM65 (ENSFHEG00000016889) MTSS1 (ENSFHEG00000016864) mal2 (ENSFHEG00000016791) #20 si:ch211-93i7.4 (ENSFHEG00000016784) #21 TNFRSF11B (ENSFHEG00000016775) #22 ENSFHEG00000016770 ##22 ENSFHEG00000016756 CARMIL1 (ENSFHEG00000016748) scgn (ENSFHEG00000016657) Aplocheiloidei ANCESTRAL SPECIES 26 ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Mangrove rivulus MODERN SPECIES 14 irx4a (ENSKMAG00000019771) LPCAT1 (ENSKMAG00000019716) slc6a3 (ENSKMAG00000019572) DCDC2 (ENSKMAG00000019506) nrsn1 (ENSKMAG00000019486) ENSKMAG00000019476 sox4b (ENSKMAG00000019466) CDKAL1 (ENSKMAG00000019441) ENSKMAG00000019420 mboat1 (ENSKMAG00000019402) TMEM65 (ENSKMAG00000019384) MTSS1 (ENSKMAG00000019293) mal2 (ENSKMAG00000019257) #20 ENSKMAG00000019246 #21 TNFRSF11B (ENSKMAG00000019227) #22 ENSKMAG00000019202 ##22 CARMIL1 (ENSKMAG00000019103) scgn (ENSKMAG00000019038) CCN3 (ENSKMAG00000018904) #19 ENSKMAG00000018873 sntb1 (ENSKMAG00000018846) #11 ENSKMAG00000018808 PTP4A3 (ENSKMAG00000018768) ndrg1b (ENSKMAG00000018710) ENSKMAG00000018338 ENSKMAG00000018242 ENSKMAG00000018211 MRS2 (ENSKMAG00000018186) ENSKMAG00000018172 CPQ (ENSKMAG00000018148) dscc1 (ENSKMAG00000018118) #16 Turquoise killifish MODERN SPECIES 1614 ENSNFUG00015006828 CDKAL1 (ENSNFUG00015006890) ENSNFUG00015007413 ENSNFUG00015007415 ENSNFUG00015007417 ENSNFUG00015007422 E2F3 (ENSNFUG00015007427) mboat1 (ENSNFUG00015007471) ENSNFUG00015007959 TMEM65 (ENSNFUG00015007962) MTSS1 (ENSNFUG00015008065) ENSNFUG00015008760 Nfu_g_1_001734 (ENSNFUG00015006035) #20 si:ch211-93i7.4 (ENSNFUG00015006040) #21 TNFRSF11B (ENSNFUG00015006046) #22 ENSNFUG00015006051 ##22 CARMIL1 (ENSNFUG00015006211) scgn (ENSNFUG00015007466) CCN3 (ENSNFUG00015007497) #19 ENSNFUG00015007502 SNTB1 (ENSNFUG00015007506) #11 ENSNFUG00015007519 #12 lyrm1 (ENSNFUG00015007553) ENSNFUG00015007609 #14 MRPL13 (ENSNFUG00015008204) #13 dscc1 (ENSNFUG00015008217) #16 ENSNFUG00015008253 tmem222a (ENSNFUG00015008257) tpbgl (ENSNFUG00015008265) ENSNFUG00015008268 nr0b2a (ENSNFUG00015008271) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Pomacentridae ANCESTRAL SPECIES 23 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Amphiprion ANCESTRAL SPECIES 54 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f.a ENSGT01020000230338.a.b.a.f.b ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 Orange clownfish MODERN SPECIES 21 slc6a3 (ENSAPEG00000015126) DCDC2 (ENSAPEG00000015093) nrsn1 (ENSAPEG00000015059) ENSAPEG00000014975 sox4b (ENSAPEG00000014937) CDKAL1 (ENSAPEG00000014801) E2F3 (ENSAPEG00000014727) mboat1 (ENSAPEG00000014677) TMEM65 (ENSAPEG00000014616) MTSS1 (ENSAPEG00000014560) mal2 (ENSAPEG00000014548) #20 ENSAPEG00000014538 ENSAPEG00000014525 si:ch211-93i7.4 (ENSAPEG00000014515) #21 TNFRSF11B (ENSAPEG00000014503) #22 ENSAPEG00000014480 ##22 CARMIL1 (ENSAPEG00000014382) scgn (ENSAPEG00000014286) CCN3 (ENSAPEG00000014256) #19 ENSAPEG00000014245 sntb1 (ENSAPEG00000014184) #11 ENSAPEG00000014032 #12 ENSAPEG00000013945 ENSAPEG00000013902 ENSAPEG00000013880 ENSAPEG00000013611 ENSAPEG00000013568 CLPTM1L (ENSAPEG00000013476) MRS2 (ENSAPEG00000013454) ENSAPEG00000013442 ENSAPEG00000013429 Clown anemonefish MODERN SPECIES 1775 TMEM65 (ENSAOCG00000005806) MTSS1 (ENSAOCG00000005775) mal2 (ENSAOCG00000005686) #20 ENSAOCG00000005680 si:ch211-93i7.4 (ENSAOCG00000005668) #21 TNFRSF11B (ENSAOCG00000001965) #22 ENSAOCG00000005629 ##22 CARMIL1 (ENSAOCG00000005563) scgn (ENSAOCG00000005428) Spiny chromis MODERN SPECIES 1293 ENSAPOG00000006731 TNFRSF11B (ENSAPOG00000006720) #22 ENSAPOG00000006712 ##22 CARMIL1 (ENSAPOG00000006669) scgn (ENSAPOG00000006374) Bicolor damselfish MODERN SPECIES 1463 si:ch211-93i7.4 (ENSSPAG00000010010) #21 ENSSPAG00000010020 TNFRSF11B (ENSSPAG00000010042) #22 ENSSPAG00000010059 ##22 CARMIL1 (ENSSPAG00000010096) scgn (ENSSPAG00000010176) Cichlidae ANCESTRAL SPECIES 26 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 2 sox4b (ENSONIG00000020748) ENSONIG00000034194 CDKAL1 (ENSONIG00000007075) E2F3 (ENSONIG00000007069) ENSONIG00000038591 mboat1 (ENSONIG00000007061) TMEM65 (ENSONIG00000007059) ENSONIG00000038235 MTSS1 (ENSONIG00000007053) mal2 (ENSONIG00000033397) #20 si:ch211-93i7.4 (ENSONIG00000007048) #21 TNFRSF11B (ENSONIG00000007044) #22 ENSONIG00000037567 ##22 ENSONIG00000040747 ##22 ENSONIG00000028296 ##22 ENSONIG00000007042 ##22 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) #19 ENSONIG00000007019 sntb1 (ENSONIG00000007016) #11 ENSONIG00000007013 #12 ENSONIG00000007011 PTP4A3 (ENSONIG00000006856) ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ENSONIG00000039329 ENSONIG00000006834 MRS2 (ENSONIG00000006832) ENSONIG00000032537 CPQ (ENSONIG00000006829) Nile tilapia MODERN SPECIES 2 ENSONIG00000007077 ENSONIG00000027348 sox4b (ENSONIG00000020748) ENSONIG00000034194 CDKAL1 (ENSONIG00000007075) E2F3 (ENSONIG00000007069) ENSONIG00000038591 mboat1 (ENSONIG00000007061) TMEM65 (ENSONIG00000007059) ENSONIG00000038235 MTSS1 (ENSONIG00000007053) mal2 (ENSONIG00000033397) #20 si:ch211-93i7.4 (ENSONIG00000007048) #21 TNFRSF11B (ENSONIG00000007044) #22 ENSONIG00000037567 ##22 ENSONIG00000040747 ##22 ENSONIG00000028296 ##22 ENSONIG00000007042 ##22 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) #19 ENSONIG00000007019 sntb1 (ENSONIG00000007016) #11 ENSONIG00000007013 #12 ENSONIG00000007011 PTP4A3 (ENSONIG00000006856) ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ENSONIG00000039329 ENSONIG00000006834 MRS2 (ENSONIG00000006832) Nile tilapia MODERN SPECIES 2 nrsn1 (ENSONIG00000007078) ENSONIG00000007077 ENSONIG00000027348 sox4b (ENSONIG00000020748) ENSONIG00000034194 CDKAL1 (ENSONIG00000007075) E2F3 (ENSONIG00000007069) ENSONIG00000038591 mboat1 (ENSONIG00000007061) TMEM65 (ENSONIG00000007059) ENSONIG00000038235 MTSS1 (ENSONIG00000007053) mal2 (ENSONIG00000033397) #20 si:ch211-93i7.4 (ENSONIG00000007048) #21 TNFRSF11B (ENSONIG00000007044) #22 ENSONIG00000037567 ##22 ENSONIG00000040747 ##22 ENSONIG00000028296 ##22 ENSONIG00000007042 ##22 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) #19 ENSONIG00000007019 sntb1 (ENSONIG00000007016) #11 ENSONIG00000007013 #12 ENSONIG00000007011 PTP4A3 (ENSONIG00000006856) ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ENSONIG00000039329 ENSONIG00000006834 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Haplochromini ANCESTRAL SPECIES 24 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Haplochromini_A ANCESTRAL SPECIES 30 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 50 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.f.a.a.a ENSGT01060000248575.D.c.b.a.b.a.f.a.b ENSGT01060000248575.D.c.b.a.b.a.e ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a.o.c ##22 ENSGT00940000155167.b.a.a.o.d ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1093 ENSMZEG00005001482 ENSMZEG00005000172 ENSMZEG00005000103 ENSMZEG00005000064 ENSMZEG00005025705 ENSMZEG00005025628 sox4b (ENSMZEG00005025621) CDKAL1 (ENSMZEG00005025619) E2F3 (ENSMZEG00005025616) mboat1 (ENSMZEG00005025614) TMEM65 (ENSMZEG00005025612) MTSS1 (ENSMZEG00005025607) mal2 (ENSMZEG00005025602) #20 si:ch211-93i7.4 (ENSMZEG00005025598) #21 TNFRSF11B (ENSMZEG00005025593) #22 ENSMZEG00005025590 ##22 ENSMZEG00005025584 ##22 CARMIL1 (ENSMZEG00005025572) scgn (ENSMZEG00005025566) CCN3 (ENSMZEG00005025563) #19 ENSMZEG00005025560 sntb1 (ENSMZEG00005025556) #11 ENSMZEG00005025550 #12 ENSMZEG00005025547 PTP4A3 (ENSMZEG00005025545) ndrg1b (ENSMZEG00005025541) ENSMZEG00005025519 ENSMZEG00005025538 ENSMZEG00005025515 ENSMZEG00005025513 MRS2 (ENSMZEG00005025510) Zebra mbuna MODERN SPECIES 274 ENSMZEG00005023392 ##22 Eastern happy MODERN SPECIES 2 ENSACLG00000015148 ENSACLG00000014932 ENSACLG00000014790 ENSACLG00000014727 ENSACLG00000014006 sox4b (ENSACLG00000013933) ENSACLG00000013888 CDKAL1 (ENSACLG00000013879) E2F3 (ENSACLG00000013754) mboat1 (ENSACLG00000013725) TMEM65 (ENSACLG00000013701) MTSS1 (ENSACLG00000013576) mal2 (ENSACLG00000013562) #20 si:ch211-93i7.4 (ENSACLG00000013556) #21 TNFRSF11B (ENSACLG00000013549) #22 ENSACLG00000013501 ##22 ENSACLG00000013493 ##22 CARMIL1 (ENSACLG00000013467) scgn (ENSACLG00000013447) ENSACLG00000013444 CCN3 (ENSACLG00000013439) #19 ENSACLG00000013437 sntb1 (ENSACLG00000013426) #11 ENSACLG00000013413 #12 ENSACLG00000013397 PTP4A3 (ENSACLG00000013391) ndrg1b (ENSACLG00000013370) ENSACLG00000013325 ENSACLG00000013321 ENSACLG00000013307 ENSACLG00000013288 Haplochromini_B ANCESTRAL SPECIES 50 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.f.a.a.a ENSGT01060000248575.D.c.b.a.b.a.f.a.b ENSGT01060000248575.D.c.b.a.b.a.e ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a.o.c ##22 ENSGT00940000155167.b.a.a.o.d ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Eastern happy MODERN SPECIES 2 ENSACLG00000014932 ENSACLG00000014790 ENSACLG00000014727 ENSACLG00000014006 sox4b (ENSACLG00000013933) ENSACLG00000013888 CDKAL1 (ENSACLG00000013879) E2F3 (ENSACLG00000013754) mboat1 (ENSACLG00000013725) TMEM65 (ENSACLG00000013701) MTSS1 (ENSACLG00000013576) mal2 (ENSACLG00000013562) #20 si:ch211-93i7.4 (ENSACLG00000013556) #21 TNFRSF11B (ENSACLG00000013549) #22 ENSACLG00000013501 ##22 ENSACLG00000013493 ##22 CARMIL1 (ENSACLG00000013467) scgn (ENSACLG00000013447) ENSACLG00000013444 CCN3 (ENSACLG00000013439) #19 ENSACLG00000013437 sntb1 (ENSACLG00000013426) #11 ENSACLG00000013413 #12 ENSACLG00000013397 PTP4A3 (ENSACLG00000013391) ndrg1b (ENSACLG00000013370) ENSACLG00000013325 ENSACLG00000013321 ENSACLG00000013307 ENSACLG00000013288 MRS2 (ENSACLG00000013272) Zebra mbuna MODERN SPECIES 1093 ENSMZEG00005000172 ENSMZEG00005000103 ENSMZEG00005000064 ENSMZEG00005025705 ENSMZEG00005025628 sox4b (ENSMZEG00005025621) CDKAL1 (ENSMZEG00005025619) E2F3 (ENSMZEG00005025616) mboat1 (ENSMZEG00005025614) TMEM65 (ENSMZEG00005025612) MTSS1 (ENSMZEG00005025607) mal2 (ENSMZEG00005025602) #20 si:ch211-93i7.4 (ENSMZEG00005025598) #21 TNFRSF11B (ENSMZEG00005025593) #22 ENSMZEG00005025590 ##22 ENSMZEG00005025584 ##22 CARMIL1 (ENSMZEG00005025572) scgn (ENSMZEG00005025566) CCN3 (ENSMZEG00005025563) #19 ENSMZEG00005025560 sntb1 (ENSMZEG00005025556) #11 ENSMZEG00005025550 #12 ENSMZEG00005025547 PTP4A3 (ENSMZEG00005025545) ndrg1b (ENSMZEG00005025541) ENSMZEG00005025519 ENSMZEG00005025538 ENSMZEG00005025515 ENSMZEG00005025513 MRS2 (ENSMZEG00005025510) ENSMZEG00005025508 Burton s mouthbrooder MODERN SPECIES 446 CDKAL1 (ENSHBUG00000011246) E2F3 (ENSHBUG00000011267) mboat1 (ENSHBUG00000011296) TMEM65 (ENSHBUG00000011307) MTSS1 (ENSHBUG00000011382) mal2 (ENSHBUG00000011415) #20 si:ch211-93i7.4 (ENSHBUG00000011431) #21 TNFRSF11B (ENSHBUG00000000308) #22 ENSHBUG00000011445 ENSHBUG00000011521 ##22 CARMIL1 (ENSHBUG00000011787) scgn (ENSHBUG00000011832) CCN3 (ENSHBUG00000011844) #19 ENSHBUG00000011853 sntb1 (ENSHBUG00000011900) #11 ENSHBUG00000011919 #12 ENSHBUG00000011937 PTP4A3 (ENSHBUG00000011967) ndrg1b (ENSHBUG00000012032) ENSHBUG00000012132 ENSHBUG00000012140 ENSHBUG00000012151 MRS2 (ENSHBUG00000012163) ENSHBUG00000012167 CPQ (ENSHBUG00000012198) Lyretail cichlid MODERN SPECIES 331 CDKAL1 (ENSNBRG00000019626) E2F3 (ENSNBRG00000019645) mboat1 (ENSNBRG00000019687) TMEM65 (ENSNBRG00000019786) MTSS1 (ENSNBRG00000019815) mal2 (ENSNBRG00000019909) #20 si:ch211-93i7.4 (ENSNBRG00000019931) #21 TNFRSF11B (ENSNBRG00000019947) #22 ENSNBRG00000020004 ##22 ENSNBRG00000020042 ##22 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) #19 ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) #11 ENSNBRG00000020565 #12 ENSNBRG00000020616 PTP4A3 (ENSNBRG00000020695) ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 ENSNBRG00000020964 ENSNBRG00000020979 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Nile tilapia MODERN SPECIES 2 ENSONIG00000027348 sox4b (ENSONIG00000020748) ENSONIG00000034194 CDKAL1 (ENSONIG00000007075) E2F3 (ENSONIG00000007069) ENSONIG00000038591 mboat1 (ENSONIG00000007061) TMEM65 (ENSONIG00000007059) ENSONIG00000038235 MTSS1 (ENSONIG00000007053) mal2 (ENSONIG00000033397) #20 si:ch211-93i7.4 (ENSONIG00000007048) #21 TNFRSF11B (ENSONIG00000007044) #22 ENSONIG00000037567 ##22 ENSONIG00000040747 ##22 ENSONIG00000028296 ##22 ENSONIG00000007042 ##22 CARMIL1 (ENSONIG00000007027) scgn (ENSONIG00000007024) CCN3 (ENSONIG00000007020) #19 ENSONIG00000007019 sntb1 (ENSONIG00000007016) #11 ENSONIG00000007013 #12 ENSONIG00000007011 PTP4A3 (ENSONIG00000006856) ndrg1b (ENSONIG00000006850) ENSONIG00000006838 ENSONIG00000039329 ENSONIG00000006834 MRS2 (ENSONIG00000006832) ENSONIG00000032537 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000178893 ENSGT00940000155167.b.a.a.o ##22 ENSGT00940000155167.b.a.a.p ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Lyretail cichlid MODERN SPECIES 331 CDKAL1 (ENSNBRG00000019626) E2F3 (ENSNBRG00000019645) mboat1 (ENSNBRG00000019687) TMEM65 (ENSNBRG00000019786) MTSS1 (ENSNBRG00000019815) mal2 (ENSNBRG00000019909) #20 si:ch211-93i7.4 (ENSNBRG00000019931) #21 TNFRSF11B (ENSNBRG00000019947) #22 ENSNBRG00000020004 ##22 ENSNBRG00000020042 ##22 CARMIL1 (ENSNBRG00000020057) scgn (ENSNBRG00000020188) CCN3 (ENSNBRG00000020277) #19 ENSNBRG00000020519 sntb1 (ENSNBRG00000020529) #11 ENSNBRG00000020565 #12 ENSNBRG00000020616 PTP4A3 (ENSNBRG00000020695) ndrg1b (ENSNBRG00000020757) ENSNBRG00000020942 ENSNBRG00000020964 ENSNBRG00000020979 ENSNBRG00000021124 MRS2 (ENSNBRG00000021882) ENSNBRG00000021901 Midas cichlid MODERN SPECIES 1213 sox4b (ENSACIG00000012884) CDKAL1 (ENSACIG00000012808) E2F3 (ENSACIG00000012779) ENSACIG00000012772 mboat1 (ENSACIG00000012746) TMEM65 (ENSACIG00000012725) MTSS1 (ENSACIG00000012687) mal2 (ENSACIG00000012643) #20 ENSACIG00000012630 ENSACIG00000012528 ENSACIG00000012483 #22 ENSACIG00000012469 ENSACIG00000012448 ##22 CARMIL1 (ENSACIG00000012371) scgn (ENSACIG00000012331) CCN3 (ENSACIG00000012172) #19 ENSACIG00000012146 sntb1 (ENSACIG00000012120) #11 ENSACIG00000012032 #12 ZFAT (ENSACIG00000011878) PTP4A3 (ENSACIG00000011864) ndrg1b (ENSACIG00000011308) ENSACIG00000011223 ENSACIG00000011214 ENSACIG00000011184 MRS2 (ENSACIG00000011167) ENSACIG00000011156 CPQ (ENSACIG00000011136) Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Carangaria ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Carangaria_A ANCESTRAL SPECIES 9 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Seriola ANCESTRAL SPECIES 16 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00940000155356.d.b.b.b.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b Greater amberjack MODERN SPECIES 75 LPCAT1 (ENSSDUG00000015038) slc6a3 (ENSSDUG00000015097) nrsn1 (ENSSDUG00000015122) ENSSDUG00000015132 sox4b (ENSSDUG00000015143) CDKAL1 (ENSSDUG00000015207) ENSSDUG00000015311 E2F3 (ENSSDUG00000015325) mboat1 (ENSSDUG00000015361) TMEM65 (ENSSDUG00000015376) MTSS1 (ENSSDUG00000015414) mal2 (ENSSDUG00000015527) #20 ENSSDUG00000015539 COLEC10 (ENSSDUG00000015548) #21 TNFRSF11B (ENSSDUG00000015579) #22 ENSSDUG00000015592 ##22 CARMIL1 (ENSSDUG00000015617) ENSSDUG00000015672 scgn (ENSSDUG00000015705) CCN3 (ENSSDUG00000015746) #19 ENSSDUG00000015769 sntb1 (ENSSDUG00000015780) #11 ENSSDUG00000015832 #12 ENSSDUG00000015868 PTP4A3 (ENSSDUG00000015910) ndrg1b (ENSSDUG00000015947) ENSSDUG00000016275 ENSSDUG00000016341 CLPTM1L (ENSSDUG00000016354) MRS2 (ENSSDUG00000016372) ENSSDUG00000016394 Yellowtail amberjack MODERN SPECIES 2813 ENSSLDG00000021766 E2F3 (ENSSLDG00000021770) mboat1 (ENSSLDG00000021779) TMEM65 (ENSSLDG00000021793) MTSS1 (ENSSLDG00000021815) mal2 (ENSSLDG00000021927) #20 ENSSLDG00000021932 COLEC10 (ENSSLDG00000021941) #21 TNFRSF11B (ENSSLDG00000021949) #22 ENSSLDG00000021956 ##22 CARMIL1 (ENSSLDG00000021966) ENSSLDG00000022078 scgn (ENSSLDG00000022085) CCN3 (ENSSLDG00000022098) #19 ENSSLDG00000022116 sntb1 (ENSSLDG00000022129) #11 ENSSLDG00000022154 #12 ENSSLDG00000022185 PTP4A3 (ENSSLDG00000022207) ndrg1b (ENSSLDG00000022225) ENSSLDG00000022243 ENSSLDG00000022284 ENSSLDG00000022292 MRS2 (ENSSLDG00000022317) ENSSLDG00000022328 Barramundi perch MODERN SPECIES 17 slc6a3 (ENSLCAG00010018706) ENSLCAG00010001765 nrsn1 (ENSLCAG00010001769) ENSLCAG00010001781 CDKAL1 (ENSLCAG00010001811) sox4b (ENSLCAG00010001830) E2F3 (ENSLCAG00010001834) mboat1 (ENSLCAG00010001847) TMEM65 (ENSLCAG00010001860) MTSS1 (ENSLCAG00010001864) mal2 (ENSLCAG00010001879) #20 ENSLCAG00010001892 ENSLCAG00010001895 si:ch211-93i7.4 (ENSLCAG00010001901) #21 TNFRSF11B (ENSLCAG00010001905) #22 ENSLCAG00010001912 ##22 CARMIL1 (ENSLCAG00010002103) scgn (ENSLCAG00010002706) CCN3 (ENSLCAG00010002715) #19 ENSLCAG00010002719 ENSLCAG00010002721 sntb1 (ENSLCAG00010002724) #11 ENSLCAG00010002726 #12 ZFAT (ENSLCAG00010002738) PTP4A3 (ENSLCAG00010002761) ENSLCAG00010002773 ENSLCAG00010003085 ENSLCAG00010004567 CLPTM1L (ENSLCAG00010004569) MRS2 (ENSLCAG00010004575) ENSLCAG00010004584 Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Tongue sole MODERN SPECIES 4 sox4b (ENSCSEG00000004025) nrsn1 (ENSCSEG00000004021) DCDC2 (ENSCSEG00000004017) slc6a3 (ENSCSEG00000004002) LPCAT1 (ENSCSEG00000003975) irx4a (ENSCSEG00000003963) irx2a (ENSCSEG00000003955) irx1a (ENSCSEG00000003947) ADAMTS16 (ENSCSEG00000003913) ENSCSEG00000003893 ENSCSEG00000003887 ADCY2 (ENSCSEG00000003855) mal2 (ENSCSEG00000003844) #20 ENSCSEG00000003841 #21 TNFRSF11B (ENSCSEG00000003835) #22 ENSCSEG00000003830 ##22 CARMIL1 (ENSCSEG00000003813) scgn (ENSCSEG00000003802) CCN3 (ENSCSEG00000003798) #19 ENSCSEG00000003793 ctnnb1 (ENSCSEG00000003769) ENSCSEG00000003765 TRAK1 (ENSCSEG00000003758) ccka (ENSCSEG00000003756) ENSCSEG00000003744 ENSCSEG00000003730 sult2st3 (ENSCSEG00000003725) tmem147 (ENSCSEG00000003720) ENSCSEG00000003716 gapdhs (ENSCSEG00000003701) SCX (ENSCSEG00000003700) Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Zig-zag eel MODERN SPECIES 7 DCDC2 (ENSMAMG00000024022) nrsn1 (ENSMAMG00000024021) ENSMAMG00000024018 ENSMAMG00000024019 ENSMAMG00000024020 ENSMAMG00000024916 sox4b (ENSMAMG00000024017) CDKAL1 (ENSMAMG00000024016) E2F3 (ENSMAMG00000024015) MBOAT1 (ENSMAMG00000024014) TMEM65 (ENSMAMG00000025377) ENSMAMG00000024012 MAL2 (ENSMAMG00000024467) #20 ENSMAMG00000026125 #21 TNFRSF11B (ENSMAMG00000024009) #22 ENSMAMG00000024008 ##22 ENSMAMG00000024007 ENSMAMG00000024006 ENSMAMG00000024005 #19 ENSMAMG00000026078 ENSMAMG00000024003 #11 ENSMAMG00000024002 #12 ENSMAMG00000024001 ENSMAMG00000025894 ENSMAMG00000023999 ENSMAMG00000023998 ENSMAMG00000023997 ENSMAMG00000023996 ENSMAMG00000023995 ENSMAMG00000023994 ENSMAMG00000023992 #16 Anabantoidei ANCESTRAL SPECIES 3 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 7 irx4a (ENSBSLG00000018764) LPCAT1 (ENSBSLG00000018557) slc6a3 (ENSBSLG00000017958) ENSBSLG00000017917 nrsn1 (ENSBSLG00000017902) ENSBSLG00000017888 sox4b (ENSBSLG00000017876) CDKAL1 (ENSBSLG00000017574) E2F3 (ENSBSLG00000017543) mboat1 (ENSBSLG00000017351) ENSBSLG00000017334 MTSS1 (ENSBSLG00000016789) mal2 (ENSBSLG00000016628) #20 si:ch211-93i7.4 (ENSBSLG00000016597) #21 TNFRSF11B (ENSBSLG00000015636) #22 ENSBSLG00000015630 ##22 CARMIL1 (ENSBSLG00000014631) scgn (ENSBSLG00000014553) CCN3 (ENSBSLG00000014184) #19 ENSBSLG00000014147 sntb1 (ENSBSLG00000014136) #11 ENSBSLG00000026082 #12 ENSBSLG00000026018 PTP4A3 (ENSBSLG00000025965) ndrg1b (ENSBSLG00000025549) ENSBSLG00000024186 ENSBSLG00000023993 MRS2 (ENSBSLG00000023966) ENSBSLG00000023957 CPQ (ENSBSLG00000023912) dscc1 (ENSBSLG00000023885) #16 Siamese fighting fish MODERN SPECIES 7 CDKAL1 (ENSBSLG00000017574) sox4b (ENSBSLG00000017876) ENSBSLG00000017888 nrsn1 (ENSBSLG00000017902) ENSBSLG00000017917 slc6a3 (ENSBSLG00000017958) LPCAT1 (ENSBSLG00000018557) irx4a (ENSBSLG00000018764) irx2a (ENSBSLG00000018817) irx1a (ENSBSLG00000018830) ADAMTS16 (ENSBSLG00000018867) ENSBSLG00000019271 TENT4A (ENSBSLG00000019278) ADCY2 (ENSBSLG00000019448) DNAH5 (ENSBSLG00000019890) ENSBSLG00000020981 ##22 ENSBSLG00000021015 ENSBSLG00000021062 ENSBSLG00000021087 cobl (ENSBSLG00000021140) GRB10 (ENSBSLG00000021356) ddc (ENSBSLG00000022416) entpd3 (ENSBSLG00000022804) rbms3 (ENSBSLG00000022849) azi2 (ENSBSLG00000022908) cmc1 (ENSBSLG00000022927) eomesb (ENSBSLG00000022981) ANKIB1 (ENSBSLG00000023099) zgc:110410 (ENSBSLG00000023149) CSMD3 (ENSBSLG00000023305) ##36 eif3ha (ENSBSLG00000024341) #30 Climbing perch MODERN SPECIES 7 slc6a3 (ENSATEG00000024157) DCDC2 (ENSATEG00000028429) nrsn1 (ENSATEG00000024148) ENSATEG00000024141 ENSATEG00000024120 sox4b (ENSATEG00000024103) CDKAL1 (ENSATEG00000024092) E2F3 (ENSATEG00000024083) MBOAT1 (ENSATEG00000024078) ENSATEG00000024074 ENSATEG00000024064 MAL2 (ENSATEG00000024059) #20 ENSATEG00000024057 ENSATEG00000024053 #21 TNFRSF11B (ENSATEG00000024050) #22 ENSATEG00000024046 ##22 ENSATEG00000024023 ENSATEG00000024010 ENSATEG00000024003 #19 ENSATEG00000024001 ENSATEG00000023994 #11 ENSATEG00000023980 #12 ENSATEG00000023974 ENSATEG00000023965 ENSATEG00000023959 ENSATEG00000023925 ENSATEG00000023908 ENSATEG00000023901 ENSATEG00000023896 ENSATEG00000028035 ENSATEG00000023892 Eupercaria ANCESTRAL SPECIES 1 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Tetraodontidae ANCESTRAL SPECIES 14 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00940000163454.a.b Fugu MODERN SPECIES 19 irx1a (ENSTRUG00000007467) irx2a (ENSTRUG00000007607) irx4a (ENSTRUG00000007775) LPCAT1 (ENSTRUG00000007993) DCDC2 (ENSTRUG00000020536) nrsn1 (ENSTRUG00000008167) sox4b (ENSTRUG00000008283) CDKAL1 (ENSTRUG00000008317) E2F3 (ENSTRUG00000025067) mboat1 (ENSTRUG00000008619) TMEM65 (ENSTRUG00000022028) MTSS1 (ENSTRUG00000009080) ENSTRUG00000009396 si:ch211-93i7.4 (ENSTRUG00000022660) #21 ENSTRUG00000009463 #22 ENSTRUG00000009552 ##22 CARMIL1 (ENSTRUG00000009574) scgn (ENSTRUG00000009987) CCN3 (ENSTRUG00000010104) #19 sntb1 (ENSTRUG00000010268) #11 ENSTRUG00000010534 #12 ENSTRUG00000010724 PTP4A3 (ENSTRUG00000010904) ndrg1b (ENSTRUG00000010966) ENSTRUG00000011167 ENSTRUG00000032169 ENSTRUG00000028405 MRS2 (ENSTRUG00000011868) ENSTRUG00000011927 ENSTRUG00000012025 ENSTRUG00000030825 Tetraodon MODERN SPECIES 23 irx4a (ENSTNIG00000007220) ENSTNIG00000001193 LPCAT1 (ENSTNIG00000007219) slc6a3 (ENSTNIG00000007218) DCDC2 (ENSTNIG00000007217) nrsn1 (ENSTNIG00000007216) sox4b (ENSTNIG00000009619) CDKAL1 (ENSTNIG00000009620) E2F3 (ENSTNIG00000009621) mboat1 (ENSTNIG00000009622) TMEM65 (ENSTNIG00000009623) MTSS1 (ENSTNIG00000009624) ENSTNIG00000009625 mal2 (ENSTNIG00000009626) #20 ENSTNIG00000000468 #22 ENSTNIG00000009627 ##22 CARMIL1 (ENSTNIG00000009628) scgn (ENSTNIG00000009629) CCN3 (ENSTNIG00000009630) #19 sntb1 (ENSTNIG00000009631) #11 ENSTNIG00000009632 #12 ENSTNIG00000009633 ENSTNIG00000009634 ndrg1b (ENSTNIG00000009635) ENSTNIG00000009636 CLPTM1L (ENSTNIG00000009637) MRS2 (ENSTNIG00000009638) ENSTNIG00000009639 CPQ (ENSTNIG00000009640) ENSTNIG00000009641 dscc1 (ENSTNIG00000009642) #16 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Ballan wrasse MODERN SPECIES 69 LPCAT1 (ENSLBEG00000021887) slc6a3 (ENSLBEG00000021954) nrsn1 (ENSLBEG00000022002) ENSLBEG00000022163 sox4b (ENSLBEG00000022430) CDKAL1 (ENSLBEG00000022455) ENSLBEG00000022497 mboat1 (ENSLBEG00000022521) TMEM65 (ENSLBEG00000022553) MTSS1 (ENSLBEG00000022637) mal2 (ENSLBEG00000022749) #20 ENSLBEG00000022761 ENSLBEG00000022774 ENSLBEG00000022790 #21 TNFRSF11B (ENSLBEG00000022804) #22 ENSLBEG00000022820 ##22 CARMIL1 (ENSLBEG00000022854) scgn (ENSLBEG00000022946) CCN3 (ENSLBEG00000022979) #19 ENSLBEG00000022997 ENSLBEG00000023013 PTK2 (ENSLBEG00000023042) Eupecaria_B ANCESTRAL SPECIES 4 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Eupecaria_C ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Large yellow croaker MODERN SPECIES 484 irx4a (ENSLCRG00005017874) LPCAT1 (ENSLCRG00005017854) slc6a3 (ENSLCRG00005017387) DCDC2 (ENSLCRG00005017367) nrsn1 (ENSLCRG00005017362) sox4b (ENSLCRG00005017359) CDKAL1 (ENSLCRG00005017341) e2f3 (ENSLCRG00005017336) mboat1 (ENSLCRG00005017319) TMEM65 (ENSLCRG00005017317) MTSS1 (ENSLCRG00005017258) mal2 (ENSLCRG00005017206) #20 ENSLCRG00005017205 si:ch211-93i7.4 (ENSLCRG00005017202) #21 TNFRSF11B (ENSLCRG00005017197) #22 ENSLCRG00005017195 ##22 CARMIL1 (ENSLCRG00005016523) scgn (ENSLCRG00005016481) CCN3 (ENSLCRG00005016470) #19 ENSLCRG00005016465 sntb1 (ENSLCRG00005016459) #11 ENSLCRG00005016397 #12 ENSLCRG00005016375 ENSLCRG00005016333 ENSLCRG00005007690 ENSLCRG00005006925 CLPTM1L (ENSLCRG00005006921) MRS2 (ENSLCRG00005006915) ENSLCRG00005006902 CPQ (ENSLCRG00005006832) dscc1 (ENSLCRG00005006815) #16 Gilthead seabream MODERN SPECIES 8 DCDC2 (ENSSAUG00010021987) nrsn1 (ENSSAUG00010021988) ENSSAUG00010021993 ENSSAUG00010021996 sox4b (ENSSAUG00010021998) CDKAL1 (ENSSAUG00010022000) ENSSAUG00010022001 E2F3 (ENSSAUG00010022002) mboat1 (ENSSAUG00010022004) TMEM65 (ENSSAUG00010022007) MTSS1 (ENSSAUG00010022012) mal2 (ENSSAUG00010022017) #20 CD209 (ENSSAUG00010022018) ENSSAUG00010022020 #21 TNFRSF11B (ENSSAUG00010022021) #22 ENSSAUG00010022022 ##22 CARMIL1 (ENSSAUG00010022047) scgn (ENSSAUG00010001683) CCN3 (ENSSAUG00010001720) #19 ENSSAUG00010001725 sntb1 (ENSSAUG00010001733) #11 ENSSAUG00010001757 #12 ENSSAUG00010001800 PTP4A3 (ENSSAUG00010001830) ENSSAUG00010001903 ENSSAUG00010003078 ENSSAUG00010012215 CLPTM1L (ENSSAUG00010012217) MRS2 (ENSSAUG00010012223) ENSSAUG00010012230 ENSSAUG00010012233 Perciformes ANCESTRAL SPECIES 3 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 ENSGT00390000017400 #16 Pike perch MODERN SPECIES 15 ENSSLUG00000005276 ENSSLUG00000005310 ENSSLUG00000005398 ENSSLUG00000005411 ENSSLUG00000005414 sox4b (ENSSLUG00000005417) ENSSLUG00000005424 CDKAL1 (ENSSLUG00000005489) E2F3 (ENSSLUG00000006126) mboat1 (ENSSLUG00000006138) TMEM65 (ENSSLUG00000006146) MTSS1 (ENSSLUG00000006173) mal2 (ENSSLUG00000006226) #20 si:ch211-93i7.4 (ENSSLUG00000006233) #21 TNFRSF11B (ENSSLUG00000006243) #22 ENSSLUG00000006253 ##22 ENSSLUG00000006266 CARMIL1 (ENSSLUG00000006360) scgn (ENSSLUG00000007175) CCN3 (ENSSLUG00000007191) #19 ENSSLUG00000007196 ENSSLUG00000007203 sntb1 (ENSSLUG00000007205) #11 ENSSLUG00000007216 #12 ZFAT (ENSSLUG00000007280) PTP4A3 (ENSSLUG00000007370) ENSSLUG00000007405 ENSSLUG00000007804 CLPTM1L (ENSSLUG00000005157) MRS2 (ENSSLUG00000005198) ENSSLUG00000005217 Channel bull blenny MODERN SPECIES 7 irx2a (ENSCGOG00000018629) irx4a (ENSCGOG00000018626) LPCAT1 (ENSCGOG00000018622) slc6a3 (ENSCGOG00000018213) nrsn1 (ENSCGOG00000018198) ENSCGOG00000018191 sox4b (ENSCGOG00000018189) CDKAL1 (ENSCGOG00000017807) E2F3 (ENSCGOG00000017795) mboat1 (ENSCGOG00000017719) TMEM65 (ENSCGOG00000017715) MTSS1 (ENSCGOG00000017359) mal2 (ENSCGOG00000017357) #20 ENSCGOG00000017354 ENSCGOG00000017350 #22 ENSCGOG00000017345 ##22 CARMIL1 (ENSCGOG00000015217) scgn (ENSCGOG00000015157) CCN3 (ENSCGOG00000015068) #19 ENSCGOG00000015065 sntb1 (ENSCGOG00000015039) #11 ENSCGOG00000015033 #12 ENSCGOG00000015016 PTP4A3 (ENSCGOG00000015000) ndrg1b (ENSCGOG00000014867) ENSCGOG00000011777 CLPTM1L (ENSCGOG00000011685) MRS2 (ENSCGOG00000011642) ENSCGOG00000011638 CPQ (ENSCGOG00000011503) dscc1 (ENSCGOG00000011475) #16 Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a ENSGT00390000017802.d ENSGT00950000183156.a.b.b.b.b.a.c.a ENSGT00940000159514 #20 ENSGT01020000230338.a.b.a.f ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c.f ENSGT00940000159963 #19 ENSGT01040000240400.c.b.a.a.a.b ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00940000156658 ENSGT00940000159581.b.a ENSGT00950000182872.f.a.b.o ENSGT00940000155113.a.b ENSGT00690000103986 ENSGT00530000063461.A.a ENSGT00390000009988 ENSGT00940000157222.b ENSGT00390000018110 Stickleback MODERN SPECIES 19 irx1a (ENSGACG00000006572) irx2a (ENSGACG00000006581) nrsn1 (ENSGACG00000006587) irx4a (ENSGACG00000006607) LPCAT1 (ENSGACG00000006610) slc6a3 (ENSGACG00000006614) sox4b (ENSGACG00000006620) CDKAL1 (ENSGACG00000006622) E2F3 (ENSGACG00000006632) TMEM65 (ENSGACG00000006642) MTSS1 (ENSGACG00000006650) mal2 (ENSGACG00000006665) #20 ENSGACG00000006682 si:ch211-93i7.4 (ENSGACG00000006686) #21 TNFRSF11B (ENSGACG00000006690) #22 ENSGACG00000006706 ##22 CARMIL1 (ENSGACG00000006707) scgn (ENSGACG00000006883) CCN3 (ENSGACG00000006901) #19 sntb1 (ENSGACG00000006912) #11 ENSGACG00000006944 #12 ENSGACG00000006955 PTP4A3 (ENSGACG00000006970) ENSGACG00000006984 ENSGACG00000007004 ENSGACG00000007020 ENSGACG00000007035 ENSGACG00000007038 ENSGACG00000007040 ENSGACG00000007045 CPQ (ENSGACG00000007051) Lumpfish MODERN SPECIES 7 ENSCLMG00005004650 DCDC2 (ENSCLMG00005004675) nrsn1 (ENSCLMG00005004787) sox4b (ENSCLMG00005004791) CDKAL1 (ENSCLMG00005004820) ENSCLMG00005006229 ENSCLMG00005006230 mboat1 (ENSCLMG00005006235) TMEM65 (ENSCLMG00005006240) MTSS1 (ENSCLMG00005006246) mal2 (ENSCLMG00005006297) #20 ENSCLMG00005006299 ENSCLMG00005006306 si:ch211-93i7.4 (ENSCLMG00005006308) #21 TNFRSF11B (ENSCLMG00005006309) #22 ENSCLMG00005006311 ##22 CARMIL1 (ENSCLMG00005006319) CLPTM1L (ENSCLMG00005006327) ENSCLMG00005006328 ENSCLMG00005006340 ENSCLMG00005006698 ENSCLMG00005006960 ENSCLMG00005006966 ENSCLMG00005007036 #12 sntb1 (ENSCLMG00005007258) #11 ENSCLMG00005007260 CCN3 (ENSCLMG00005007266) #19 scgn (ENSCLMG00005007294) MRS2 (ENSCLMG00005007298) ENSCLMG00005007546 CPQ (ENSCLMG00005007559) Pinecone sodierfish MODERN SPECIES 7 slc6a3 (ENSMMDG00005024105) DCDC2 (ENSMMDG00005024107) nrsn1 (ENSMMDG00005024108) ENSMMDG00005001206 ENSMMDG00005001972 sox4b (ENSMMDG00005017419) CDKAL1 (ENSMMDG00005017430) E2F3 (ENSMMDG00005017765) mboat1 (ENSMMDG00005017770) TMEM65 (ENSMMDG00005017776) MTSS1 (ENSMMDG00005017778) mal2 (ENSMMDG00005017782) #20 ENSMMDG00005017783 si:ch211-93i7.4 (ENSMMDG00005017785) #21 TNFRSF11B (ENSMMDG00005017788) #22 ENSMMDG00005017790 ##22 ENSMMDG00005017791 CARMIL1 (ENSMMDG00005017797) scgn (ENSMMDG00005017868) CCN3 (ENSMMDG00005017885) #19 CCN3 (ENSMMDG00005018075) #19 enpp2 (ENSMMDG00005018081) ##18 taf2 (ENSMMDG00005018110) #17 cndp1 (ENSMMDG00005018634) ABHD5 (ENSMMDG00005018647) ano10a (ENSMMDG00005018693) snrka (ENSMMDG00005019102) pomgnt2 (ENSMMDG00005019104) GASK1A (ENSMMDG00005019106) tgfbr2b (ENSMMDG00005019122) ENSMMDG00005019467 Osteoglossocephalai ANCESTRAL SPECIES 393 ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 20 ENSGT00940000160768 ENSGT00940000153859.b #7 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F.n #14 ENSGT00520000055667.c #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A.n #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b.c #22 ENSGT00940000155167.b.a.b.a ##22 ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.a ENSGT00390000005809 Asian bonytongue MODERN SPECIES 9 TBC1D31 (ENSSFOG00015005517) #7 ENSSFOG00015005317 has2 (ENSSFOG00015005287) #10 sntb1 (ENSSFOG00015005250) #11 MTBP (ENSSFOG00015005181) #12 mrpl13 (ENSSFOG00015005149) #13 COL14A1 (ENSSFOG00015005012) #14 deptor (ENSSFOG00015004956) #15 dscc1 (ENSSFOG00015004911) #16 taf2 (ENSSFOG00015004791) #17 ENPP2 (ENSSFOG00015004691) #18 CCN3 (ENSSFOG00015004662) #19 mal2 (ENSSFOG00015004637) #20 si:ch211-93i7.4 (ENSSFOG00015004621) #21 TNFRSF11B (ENSSFOG00015004616) #22 ENSSFOG00015004556 ##22 CARMIL1 (ENSSFOG00015004303) scgn (ENSSFOG00015004218) MTSS1 (ENSSFOG00015004132) ndufb9 (ENSSFOG00015027706) TMEM65 (ENSSFOG00015033091) mboat1 (ENSSFOG00015025225) ENSSFOG00015004019 CDKAL1 (ENSSFOG00015004003) ENSSFOG00015003934 nrsn1 (ENSSFOG00015024787) ENSSFOG00015003896 slc6a3 (ENSSFOG00015003829) LPCAT1 (ENSSFOG00015003762) irx4a (ENSSFOG00015003670) irx2a (ENSSFOG00015003644) P. kingsleyae MODERN SPECIES 1 zhx2a (ENSPKIG00000018756) #9 ENSPKIG00000018765 has2 (ENSPKIG00000018776) #10 sntb1 (ENSPKIG00000018798) #11 MTBP (ENSPKIG00000018833) #12 mrpl13 (ENSPKIG00000018874) #13 COL14A1 (ENSPKIG00000018918) #14 deptor (ENSPKIG00000019001) #15 dscc1 (ENSPKIG00000019054) #16 taf2 (ENSPKIG00000019134) #17 ENPP2 (ENSPKIG00000019314) #18 CCN3 (ENSPKIG00000019464) #19 ENSPKIG00000019637 #22 mal2 (ENSPKIG00000019681) #20 si:ch211-93i7.4 (ENSPKIG00000019699) #21 ENSPKIG00000019723 ##22 ENSPKIG00000019750 ENSPKIG00000019782 CARMIL1 (ENSPKIG00000019813) scgn (ENSPKIG00000019887) MTSS1 (ENSPKIG00000019920) ndufb9 (ENSPKIG00000019952) rnf139 (ENSPKIG00000019977) TMEM65 (ENSPKIG00000020023) mboat1 (ENSPKIG00000020096) ENSPKIG00000020122 CDKAL1 (ENSPKIG00000020135) sox4b (ENSPKIG00000020154) nrsn1 (ENSPKIG00000020163) DCDC2 (ENSPKIG00000020174) slc6a3 (ENSPKIG00000020190) Osteoglossiformes ANCESTRAL SPECIES 165 ENSGT00910000144277 ENSGT00390000014398 ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.d #15 ENSGT00940000155778.A.m #18 ENSGT00940000156034.b ENSGT00940000155167.b.b.d #22 ENSGT00940000155167.b.a.b.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.b ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.d ENSGT01030000234564.a.a.a.a.a ENSGT00940000155115.a.a.a.b ENSGT00940000155952 ENSGT00940000161470.a.a ENSGT00530000063877.b.a ENSGT00940000159377 ENSGT00940000161224 ENSGT01030000234574.A.a.e.a ENSGT00940000158596.a.a Asian bonytongue MODERN SPECIES 15 ENSSFOG00015019119 ssr2 (ENSSFOG00015019095) msto1 (ENSSFOG00015019076) ENSSFOG00015019023 pdia7 (ENSSFOG00015018989) sdha (ENSSFOG00015018938) psma2b (ENSSFOG00015026284) wdyhv1 (ENSSFOG00015018923) ZHX1 (ENSSFOG00015018886) ##9 derl1 (ENSSFOG00015000474) #8 ZHX2 (ENSSFOG00015024975) #9 COL14A1 (ENSSFOG00015000554) #14 ENPP2 (ENSSFOG00015000561) #18 ENSSFOG00015000567 ENSSFOG00015000986 #22 ENSSFOG00015000990 ##22 CARMIL1 (ENSSFOG00015001001) SCGN (ENSSFOG00015001097) MTSS1 (ENSSFOG00015001122) tatdn1 (ENSSFOG00015001193) rnf139 (ENSSFOG00015025836) tmem65 (ENSSFOG00015030564) srfbp1 (ENSSFOG00015001274) e2f3 (ENSSFOG00015001281) sox4a (ENSSFOG00015025792) nrsn1l (ENSSFOG00015029000) lpcat1 (ENSSFOG00015001378) mrpl36 (ENSSFOG00015001447) ndufs6 (ENSSFOG00015001469) irx4b (ENSSFOG00015001487) irx1b (ENSSFOG00015031073) P. kingsleyae MODERN SPECIES 104 ZFPM2 (ENSPKIG00000025607) oxr1b (ENSPKIG00000025595) ENSPKIG00000025596 rnf144b (ENSPKIG00000025604) sdha (ENSPKIG00000024753) psma2b (ENSPKIG00000024738) wdyhv1 (ENSPKIG00000024731) ZHX1 (ENSPKIG00000024726) ##9 derl1 (ENSPKIG00000024714) #8 ZHX2 (ENSPKIG00000024705) #9 COL14A1 (ENSPKIG00000024680) #14 deptor (ENSPKIG00000024652) #15 ENPP2 (ENSPKIG00000024612) #18 ENSPKIG00000024511 ENSPKIG00000024462 #22 ENSPKIG00000024447 ##22 CARMIL1 (ENSPKIG00000024396) SCGN (ENSPKIG00000024357) MTSS1 (ENSPKIG00000024344) tatdn1 (ENSPKIG00000024331) rnf139 (ENSPKIG00000024320) tmem65 (ENSPKIG00000024302) ENSPKIG00000024291 e2f3 (ENSPKIG00000024283) ENSPKIG00000024276 sox4a (ENSPKIG00000024271) nrsn1l (ENSPKIG00000024262) mrpl36 (ENSPKIG00000024258) ndufs6 (ENSPKIG00000024253) irx4b (ENSPKIG00000024240) ENSPKIG00000024231 Clupeocephala ANCESTRAL SPECIES 374 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c Otomorpha ANCESTRAL SPECIES 430 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c Clupeiformes ANCESTRAL SPECIES 15 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00940000153385.b.a.b.fd.a ENSGT00940000160668 ENSGT00940000159762 ENSGT00940000159208.A ENSGT00910000144277 ENSGT00390000008818 ENSGT00940000155187.B ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00940000159200 ENSGT00390000009448 ENSGT00940000160991.a ENSGT00940000164565 ENSGT00940000156904.a.a ENSGT00560000077232.A.b ENSGT00390000005284.a ENSGT00390000015391 ENSGT00940000165364.a.b Denticle herring DUPLICATION Denticle herring MODERN SPECIES 111 mylipa (ENSDCDG00000028204) npr1a (ENSDCDG00000026088) ints3 (ENSDCDG00000026029) ENSDCDG00000026023 ENSDCDG00000026022 ENSDCDG00000026019 ENSDCDG00000026017 ENSDCDG00000026015 sdha (ENSDCDG00000026009) ccdc127b (ENSDCDG00000026003) oxr1b (ENSDCDG00000021947) ENSDCDG00000021880 #9 COL14A1 (ENSDCDG00000019653) #14 ENPP2 (ENSDCDG00000014497) #18 ENSDCDG00000013470 ENSDCDG00000013383 ##22 ENSDCDG00000008091 SCGN (ENSDCDG00000007750) MTSS1 (ENSDCDG00000007678) ndufb9 (ENSDCDG00000007660) tatdn1 (ENSDCDG00000007650) rnf139 (ENSDCDG00000007641) tmem65 (ENSDCDG00000007639) dnajc8 (ENSDCDG00000007630) hnrnpr (ENSDCDG00000006167) tap2a (ENSDCDG00000011492) psmb12 (ENSDCDG00000011455) psmb13a (ENSDCDG00000011409) psmb8a (ENSDCDG00000011389) ENSDCDG00000011375 psmb8a (ENSDCDG00000011353) Denticle herring MODERN SPECIES 12 zgc:91944 (ENSDCDG00000029390) ENSDCDG00000029394 heyl (ENSDCDG00000029395) zbtb8b (ENSDCDG00000029396) fuca1.2 (ENSDCDG00000029397) neu1 (ENSDCDG00000029399) ENSDCDG00000029401 ENSDCDG00000029402 adnp2b (ENSDCDG00000029404) nutf2l (ENSDCDG00000029405) bloc1s4 (ENSDCDG00000029407) pard6gb (ENSDCDG00000029408) ENSDCDG00000029411 #14 ENPP2 (ENSDCDG00000029486) #18 ENSDCDG00000031735 ENSDCDG00000005732 ##22 ENSDCDG00000006936 SCGN (ENSDCDG00000013013) MTSS1 (ENSDCDG00000013094) ndufb9 (ENSDCDG00000013244) tatdn1 (ENSDCDG00000013258) rnf139 (ENSDCDG00000013804) tmem65 (ENSDCDG00000013806) dnajc8 (ENSDCDG00000013810) hnrnpr (ENSDCDG00000014347) tap2a (ENSDCDG00000014473) psmb9a (ENSDCDG00000014553) psmb12 (ENSDCDG00000014568) psmb13a (ENSDCDG00000014579) ENSDCDG00000014609 ENSDCDG00000014631 Atlantic herring MODERN SPECIES 10 brd2a (ENSCHAG00000011771) hsd17b8 (ENSCHAG00000011805) col11a2 (ENSCHAG00000011880) ENSCHAG00000012417 rxrba (ENSCHAG00000012452) sdha (ENSCHAG00000013358) ccdc127b (ENSCHAG00000014626) ENSCHAG00000014639 ccdc127b (ENSCHAG00000014681) ccdc127b (ENSCHAG00000014709) oxr1b (ENSCHAG00000014759) ZHX2 (ENSCHAG00000015899) #9 COL14A1 (ENSCHAG00000015921) #14 ENPP2 (ENSCHAG00000016944) #18 ENSCHAG00000020642 ENSCHAG00000022230 ##22 ENSCHAG00000022303 SCGN (ENSCHAG00000023494) MTSS1 (ENSCHAG00000023510) ndufb9 (ENSCHAG00000023662) tatdn1 (ENSCHAG00000023668) rnf139 (ENSCHAG00000023733) tmem65 (ENSCHAG00000023740) dnajc8 (ENSCHAG00000023776) hnrnpr (ENSCHAG00000024130) tap2a (ENSCHAG00000024184) psmb8a (ENSCHAG00000024290) psmb9a (ENSCHAG00000024300) psmb12 (ENSCHAG00000024312) psmb13a (ENSCHAG00000024343) ENSCHAG00000024397 Otophysi ANCESTRAL SPECIES 297 ENSGT00940000157045.b ENSGT00390000017671.a.a ENSGT00940000157432.A ENSGT00940000165091.d.d ENSGT00940000153511.a ENSGT00390000012569.a ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c Characiphysae ANCESTRAL SPECIES 91 ENSGT00940000157045.b ENSGT00390000017671.a.a ENSGT00940000178110 ENSGT01030000234973 ENSGT00940000157432.A ENSGT00940000165091.d.d ENSGT00940000153511.a ENSGT00390000012569.a ENSGT01100000263549.k.i.b.b ENSGT00940000153770.c.a ENSGT01100000263549.k.i.a.b.b ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c ENSGT00940000158438.m ENSGT00390000018560.a.a.a.a.b ENSGT00550000074618.a.a.lb.a ENSGT00390000014889.a.e ENSGT00940000155027.c.a ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00390000017153.b Channel catfish DUPLICATION Channel catfish MODERN SPECIES 5 ENSIPUG00000008029 ENSIPUG00000008019 ENSIPUG00000008016 ENSIPUG00000008003 ENSIPUG00000007985 ENSIPUG00000007973 ENSIPUG00000007969 ENSIPUG00000007961 ENSIPUG00000007950 #9 COL14A1 (ENSIPUG00000007874) #14 ENPP2 (ENSIPUG00000007773) #18 ENSIPUG00000007748 ENSIPUG00000007694 ENSIPUG00000007681 ENSIPUG00000007670 ENSIPUG00000007644 ##22 proza (ENSIPUG00000007612) ENSIPUG00000007534 SCGN (ENSIPUG00000007511) MTSS1 (ENSIPUG00000007403) ndufb9 (ENSIPUG00000007362) tatdn1 (ENSIPUG00000007324) rnf139 (ENSIPUG00000007294) ENSIPUG00000007279 tmem65 (ENSIPUG00000007264) SYNGAP1 (ENSIPUG00000007189) SCN1B (ENSIPUG00000007159) ENSIPUG00000007152 lingo4a (ENSIPUG00000007143) ENSIPUG00000007137 ENSIPUG00000007132 Channel catfish MODERN SPECIES 5 MTSS1 (ENSIPUG00000007403) ndufb9 (ENSIPUG00000007362) tatdn1 (ENSIPUG00000007324) rnf139 (ENSIPUG00000007294) ENSIPUG00000007279 tmem65 (ENSIPUG00000007264) SYNGAP1 (ENSIPUG00000007189) SCN1B (ENSIPUG00000007159) ENSIPUG00000007152 lingo4a (ENSIPUG00000007143) ENSIPUG00000007137 ENSIPUG00000007132 ENSIPUG00000007120 ENSIPUG00000007110 ENSIPUG00000007098 ENSIPUG00000007060 ##22 ENSIPUG00000006936 ENSIPUG00000006916 ENSIPUG00000006909 snrpg (ENSIPUG00000006885) ppp2ca (ENSIPUG00000006842) ENSIPUG00000006826 c14h5orf24 (ENSIPUG00000006817) ENSIPUG00000006786 rmnd5b (ENSIPUG00000006753) N4BP3 (ENSIPUG00000006727) ENSIPUG00000006712 ENSIPUG00000006692 ENSIPUG00000006669 anxa6 (ENSIPUG00000006364) tnip1 (ENSIPUG00000006222) Characiphysae_b ANCESTRAL SPECIES 92 ENSGT00940000157045.b ENSGT00390000017671.a.a ENSGT00940000157432.A ENSGT00940000165091.d.d ENSGT00940000153511.a ENSGT00390000012569.a ENSGT00940000153770.c.a ENSGT01100000263549.k.i.a.b.b ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c ENSGT00940000158438.m ENSGT00390000018560.a.a.a.a.b ENSGT00940000154996.a.a.b ENSGT00550000074618.a.a.lb.a ENSGT00390000014889.a.e ENSGT00940000155027.c.a ENSGT00940000153203.A.a ENSGT00940000158603 Characoidei ANCESTRAL SPECIES 119 ENSGT00940000164978.a ENSGT00390000017153.b ENSGT00940000158603 ENSGT00940000153203.A.a ENSGT00940000155027.c.a ENSGT00390000014889.a.e ENSGT00550000074618.a.a.lb.a ENSGT00940000154996.a.a.b ENSGT00390000018560.a.a.a.a.b ENSGT00940000158438.m ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00940000155167.b.a.b ##22 ENSGT00950000183108.a.d ENSGT00940000155112.B.b ENSGT00940000162635.pb ENSGT00940000156034.b ENSGT00940000155778.A #18 ENSGT00940000153769.F.m #14 ENSGT00390000001515 #13 ENSGT00390000003305 #12 ENSGT00950000182863.A.b #11 ENSGT00390000010337.B.a.b #10 ENSGT00940000157621 ENSGT00940000164547.b.b ENSGT00940000157781 ENSGT01030000235080 ENSGT00940000158322.i Red-bellied piranha MODERN SPECIES 188 DPY19L4 (ENSPNAG00000023169) ENSPNAG00000023141 ENSPNAG00000023010 ADGRB1 (ENSPNAG00000022990) atp5if1a (ENSPNAG00000022875) hnrnpr (ENSPNAG00000022865) dnajc8 (ENSPNAG00000022812) ENSPNAG00000005585 ENSPNAG00000022750 ENSPNAG00000022739 ENSPNAG00000003733 ENSPNAG00000022724 ENSPNAG00000022714 #9 COL14A1 (ENSPNAG00000022703) #14 ENSPNAG00000003724 ENSPNAG00000022628 ##22 Mexicana tetra MODERN SPECIES 23 ENSAMXG00000036387 N4BP3 (ENSAMXG00000031078) rmnd5b (ENSAMXG00000020571) ENSAMXG00000020564 si:ch1073-44g3.1 (ENSAMXG00000020562) ppp2caa (ENSAMXG00000034795) lingo4a (ENSAMXG00000031389) scn1bb (ENSAMXG00000038915) SYNGAP1 (ENSAMXG00000020546) tmem65 (ENSAMXG00000020536) rnf139 (ENSAMXG00000020533) tatdn1 (ENSAMXG00000020526) ndufb9 (ENSAMXG00000043509) MTSS1 (ENSAMXG00000020509) ENSAMXG00000034195 ENSAMXG00000020465 ##22 SCGN (ENSAMXG00000039597) ENSAMXG00000020474 ENSAMXG00000042311 ENSAMXG00000041009 ENSAMXG00000043671 ENSAMXG00000017732 ENPP2 (ENSAMXG00000031220) #18 COL14A1 (ENSAMXG00000012535) #14 ZHX2 (ENSAMXG00000032888) #9 DPY19L4 (ENSAMXG00000005510) SLC4A7 (ENSAMXG00000005426) ENSAMXG00000035763 ENSAMXG00000040545 ENSAMXG00000037183 ENSAMXG00000029508 Electric eel MODERN SPECIES 697 ENSEEEG00000017273 ENSEEEG00000017272 ENSEEEG00000017270 ##22 ENSEEEG00000017269 cratb (ENSEEEG00000016972) ppt2b (ENSEEEG00000016868) ENSEEEG00000016853 ddah2 (ENSEEEG00000016850) ENSEEEG00000016849 clic1 (ENSEEEG00000016848) ENSEEEG00000016845 ENSEEEG00000016842 Cyprinoidei ANCESTRAL SPECIES 35 ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c ENSGT00940000160991.b.b ENSGT00390000018560.a.a.a.a.b ENSGT00940000158438.m ENSGT00940000154996.a.a.b ENSGT00940000166429 ENSGT00390000003114.e.b.a ENSGT00390000007153.a.b ENSGT00940000155413.c ENSGT00390000017503.j ENSGT00390000003488.b.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 349 ENSGT00980000199494 ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519 ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751.q.b ENSGT00950000182893.a.a.a.b.d.b #9 ENSGT00390000012569.a ENSGT00940000153511.a ENSGT00940000165091.d.d.a.b ENSGT00940000157432.A ENSGT00940000155167.b.a.b.g ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00940000158932.j ENSGT00390000017802.c.d ENSGT00940000160991.b.b ENSGT00390000018560.a.a.a.a.b ENSGT00940000158438.m.b ENSGT00940000154996.a.a.b.d ENSGT00940000166429.g.a ENSGT00390000003114.e.b.a.g.a ENSGT00390000007153.a.b.k.a ENSGT00940000155413.c ENSGT01090000260003.a.b.b.a.a.a.b.b.vb.b ENSGT00390000017503.j ENSGT00390000003488.b.a.a Goldfish DUPLICATION Goldfish MODERN SPECIES 10 ENSCARG00000058935 ENSCARG00000058336 ADGRB1 (ENSCARG00000057592) atp5if1a (ENSCARG00000057527) ENSCARG00000057522 hnrnpr (ENSCARG00000057446) ENSCARG00000057423 ENSCARG00000057401 ENSCARG00000055833 #9 ENSCARG00000055825 ENSCARG00000055816 ENSCARG00000055812 mycbp (ENSCARG00000055793) rarres3 (ENSCARG00000055783) ENPP2 (ENSCARG00000054222) #18 ENSCARG00000054027 ##22 ENSCARG00000054021 ENSCARG00000052478 SCGN (ENSCARG00000052319) rnf139 (ENSCARG00000052299) tmem65 (ENSCARG00000052180) ENSCARG00000052171 scn1bb (ENSCARG00000052151) SYNGAP1 (ENSCARG00000050649) ENSCARG00000050578 lingo4a (ENSCARG00000050574) ctss1 (ENSCARG00000050567) gpd1c (ENSCARG00000007822) golph3l (ENSCARG00000007818) mcl1a (ENSCARG00000007815) tnfaip8l2a (ENSCARG00000007809) Goldfish MODERN SPECIES 10 ADGRB1 (ENSCARG00000057592) ENSCARG00000058336 ENSCARG00000058935 tnfaip8l2a (ENSCARG00000058957) mcl1a (ENSCARG00000058970) ENSCARG00000058989 gpd1c (ENSCARG00000059006) ctss1 (ENSCARG00000059058) lingo4a (ENSCARG00000059075) SYNGAP1 (ENSCARG00000059093) ENSCARG00000059577 ENSCARG00000059589 ENSCARG00000059720 ENSCARG00000060387 ENPP2 (ENSCARG00000060441) #18 ENSCARG00000061271 ##22 ENSCARG00000061575 SCGN (ENSCARG00000064106) rnf139 (ENSCARG00000064122) tmem65 (ENSCARG00000064144) ENSCARG00000064159 scn1bb (ENSCARG00000064173) sp4 (ENSCARG00000064203) sp8a (ENSCARG00000064243) ITGB8 (ENSCARG00000064263) ENSCARG00000064275 polr1f (ENSCARG00000064285) twist1a (ENSCARG00000064294) ENSCARG00000064310 SNX13 (ENSCARG00000064353) ENSCARG00000065533 Cyprininae_a ANCESTRAL SPECIES 548 ENSGT00940000155167.b.a.b.g ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00940000158932.j ENSGT00390000017802.c.d ENSGT00940000160991.b.b ENSGT00390000018560.a.a.a.a.b ENSGT00940000158438.m.a ENSGT00940000154996.a.a.b.c ENSGT00940000166429.g.b ENSGT00390000003114.e.b.a.g.b ENSGT00390000007153.a.b.k.b ENSGT01090000260003.a.b.b.a.a.a.b.b.vb.a Common carp reference MODERN SPECIES 12 ENSCCRG00000063161 ENSCCRG00000026876 #9 dnajc8 (ENSCCRG00000073643) hnrnpr (ENSCCRG00000066734) atp5if1a (ENSCCRG00000058593) ENSCCRG00000075751 ENSCCRG00000042486 ENSCCRG00000059813 ENSCCRG00000078293 ENSCCRG00000067700 ENSCCRG00000009253 ENSCCRG00000044613 ENSCCRG00000062939 ENSCCRG00000063932 #18 ENSCCRG00000065967 ENSCCRG00000042459 ##22 ENSCCRG00000056913 ENSCCRG00000012195 rnf139 (ENSCCRG00000005976) tmem65 (ENSCCRG00000070351) ENSCCRG00000057420 ENSCCRG00000005845 scn1bb (ENSCCRG00000005818) ENSCCRG00000054969 lingo4a (ENSCCRG00000078790) ctss1 (ENSCCRG00000011655) gpd1c (ENSCCRG00000012575) golph3l (ENSCCRG00000053701) mcl1a (ENSCCRG00000072791) vps72a (ENSCCRG00000063635) tnfaip8l2a (ENSCCRG00000067036) Golden-line barbel MODERN SPECIES 1761 ENSSGRG00000027699 ENPP2 (ENSSGRG00000027723) #18 ENSSGRG00000028997 ##22 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000155167.b.a.b.h.a.a ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155167.b.a.b.h.a.a ##22 Golden-line barbel MODERN SPECIES 2488 ENSSGRG00000013127 ##22 ENSSGRG00000013126 tatdn1 (ENSSGRG00000013088) ENSSGRG00000013087 Goldfish MODERN SPECIES 38 ENSCARG00000046024 gja9b (ENSCARG00000046201) ENSCARG00000046214 ENSCARG00000046243 slc9a1b (ENSCARG00000046341) ENSCARG00000046792 ENSCARG00000046799 KDM1B (ENSCARG00000046833) ZHX2 (ENSCARG00000028578) #9 dnajc8 (ENSCARG00000028588) hnrnpr (ENSCARG00000028637) atp5if1a (ENSCARG00000028715) ADGRB1 (ENSCARG00000028750) ENPP2 (ENSCARG00000029425) #18 ENSCARG00000030447 ENSCARG00000030760 ##22 tatdn1 (ENSCARG00000030779) rnf139 (ENSCARG00000030919) tmem65 (ENSCARG00000030930) ENSCARG00000030957 scn1bb (ENSCARG00000030963) SYNGAP1 (ENSCARG00000030996) ctss1 (ENSCARG00000031286) gpd1c (ENSCARG00000031299) ENSCARG00000031334 mcl1a (ENSCARG00000031345) ENSCARG00000031364 glmp (ENSCARG00000031389) tmem79a (ENSCARG00000031407) cyp51 (ENSCARG00000031473) nup42 (ENSCARG00000032042) Cyprininae ANCESTRAL SPECIES ENSGT00940000155167.b.a.b.h.a.b ##22 Goldfish MODERN SPECIES 18 ugdh (ENSCARG00000063108) smim14 (ENSCARG00000063129) ube2kb (ENSCARG00000063152) pds5a (ENSCARG00000063506) n4bp2 (ENSCARG00000067215) rhoh (ENSCARG00000067231) CHRNA9 (ENSCARG00000067245) ENSCARG00000067276 ENSCARG00000067292 ENSCARG00000067295 nsun3 (ENSCARG00000067299) arl13b (ENSCARG00000067321) ENSCARG00000067344 cldng (ENSCARG00000067351) ENSCARG00000067356 ENSCARG00000067369 ##22 chmp2bb (ENSCARG00000067378) creb1a (ENSCARG00000067396) DHRSX (ENSCARG00000067422) ENSCARG00000067434 cd99 (ENSCARG00000067439) gyg2 (ENSCARG00000067457) MXRA5 (ENSCARG00000067477) PRKX (ENSCARG00000067496) nlgn4xa (ENSCARG00000067524) pudp (ENSCARG00000067609) ppp2r2ca (ENSCARG00000067647) WFS1 (ENSCARG00000014459) crmp1 (ENSCARG00000014497) fip1l1b (ENSCARG00000014818) chic2 (ENSCARG00000014847) Cyprininae ANCESTRAL SPECIES 821 ENSGT00940000153769.F.m #14 ENSGT00950000182893.a.a.a.b.d.a #9 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.h.b ##22 ENSGT00940000156272 ENSGT00940000158932.i ENSGT00390000017802.c.c Cyprininae_a ANCESTRAL SPECIES 457 ENSGT00980000199494 ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751.q.b ENSGT00950000182893.a.a.a.b.d.b #9 ENSGT00940000153769.F.m.c #14 ENSGT00950000182893.a.a.a.b.d.a #9 ENSGT00390000012569.a ENSGT00940000153511.a ENSGT00940000165091.d.d.a.b ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.h.b ##22 ENSGT00940000156272 ENSGT00940000158932.i ENSGT00390000017802.c.c Common carp reference MODERN SPECIES 31 gja9b (ENSCCRG00000075684) srsf10b (ENSCCRG00000056509) slc9a1b (ENSCCRG00000034926) ENSCCRG00000067313 ENSCCRG00000074174 ENSCCRG00000057177 #14 ENSCCRG00000069481 ENSCCRG00000072658 #9 dnajc8 (ENSCCRG00000015892) hnrnpr (ENSCCRG00000015930) atp5if1a (ENSCCRG00000074826) ENSCCRG00000015798 ENSCCRG00000069466 ENSCCRG00000023891 #18 ENSCCRG00000031775 ENSCCRG00000065053 ##22 tatdn1 (ENSCCRG00000059323) rnf139 (ENSCCRG00000067911) tmem65 (ENSCCRG00000075047) ENSCCRG00000070019 scn1bb (ENSCCRG00000081651) ENSCCRG00000001525 lingo4a (ENSCCRG00000076062) ctss1 (ENSCCRG00000075355) gpd1c (ENSCCRG00000011669) golph3l (ENSCCRG00000012478) mcl1a (ENSCCRG00000081622) ENSCCRG00000054394 tnfaip8l2a (ENSCCRG00000060358) sema6d (ENSCCRG00000070410) dus3l (ENSCCRG00000027608) Zebrafish MODERN SPECIES 10 ENSDARG00000076623 #14 ENSDARG00000101559 ##9 dnajc8 (ENSDARG00000059373) hnrnpr (ENSDARG00000014569) atp5if1a (ENSDARG00000067975) ADGRB1 (ENSDARG00000078529) ENSDARG00000098377 ##22 ENSDARG00000103887 tatdn1 (ENSDARG00000036924) rnf139 (ENSDARG00000036929) tmem65 (ENSDARG00000076393) ENSDARG00000020176 scn1bb (ENSDARG00000105003) SYNGAP1 (ENSDARG00000063713) lingo4a (ENSDARG00000094908) ctss1 (ENSDARG00000036940) gpd1c (ENSDARG00000036942) golph3l (ENSDARG00000036943) ensaa (ENSDARG00000036944) mcl1a (ENSDARG00000009779) vps72a (ENSDARG00000063718) tnfaip8l2a (ENSDARG00000075592) Euteleosteomorpha ANCESTRAL SPECIES 72 ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000161047 ENSGT01100000263514.B ENSGT00940000165771 ENSGT00980000199469 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00940000177196 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00960000187692 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c Acanthomorphata ANCESTRAL SPECIES 159 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000161047 ENSGT01100000263514.B ENSGT00940000165771 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00940000177196 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 Euacanthomorphacea ANCESTRAL SPECIES 89 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000161047 ENSGT01100000263514.B ENSGT00940000165771 ENSGT00940000176878 ENSGT01060000248670 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 Percomorphaceae ANCESTRAL SPECIES 84 ENSGT00390000012691 ENSGT00390000008815 ENSGT00940000178053 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT01060000248670 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.b ENSGT01100000263549.j.b.h ENSGT00940000153770.l.a ENSGT01030000234589.g.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b ENSGT01090000260033.b Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.b.a ENSGT01100000263549.j.b.h ENSGT00940000153770.l.a ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.b ENSGT01100000263549.j.a.g.a Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.b ENSGT01100000263549.j.b.h ENSGT01100000263549.j.a.h Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234589.g.a.i.a ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.b ENSGT01100000263549.j.b.h ENSGT01100000263549.j.a.h Ballan wrasse MODERN SPECIES 333 ENSLBEG00000026642 ENSLBEG00000026629 ENSLBEG00000026617 ENSLBEG00000026591 ENSLBEG00000026579 ENSLBEG00000026572 ENSLBEG00000026543 ENSLBEG00000026477 ZHX1 (ENSLBEG00000026447) ##9 ENSLBEG00000026438 #9 ENSLBEG00000026421 COL14A1 (ENSLBEG00000026377) #14 ENPP2 (ENSLBEG00000026306) #18 ENSLBEG00000026248 ENSLBEG00000026232 ##22 ENSLBEG00000026159 SCGN (ENSLBEG00000026124) ENSLBEG00000026109 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.h.a ENSGT01030000234589.g.a.i.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.g ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.b Eupecaria_C ANCESTRAL SPECIES 35 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 38 ENSGT00940000178829 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b ENSGT00940000155088.b.a.a.i.b ENSGT00940000164382.b.a European seabass MODERN SPECIES 22 ENSDLAG00005003025 ENSDLAG00005016817 ENSDLAG00005027148 ENSDLAG00005029076 ENSDLAG00005019064 ENSDLAG00005032452 ENSDLAG00005024963 ENSDLAG00005024952 ##9 ENSDLAG00005024951 ENSDLAG00005024949 #9 ENSDLAG00005031690 ENSDLAG00005033870 ENSDLAG00005024669 #14 ENSDLAG00005024033 #18 ENSDLAG00005023407 ENSDLAG00005023391 ##22 ENSDLAG00005022745 ENSDLAG00005022707 ENSDLAG00005034324 tmem65 (ENSDLAG00005030552) ENSDLAG00005022686 tatdn1 (ENSDLAG00005022618) ENSDLAG00005029007 ENSDLAG00005022603 ENSDLAG00005019788 ENSDLAG00005027917 ENSDLAG00005027817 ENSDLAG00005031301 ENSDLAG00005027807 ENSDLAG00005030903 ENSDLAG00005005694 Large yellow croaker MODERN SPECIES 484 ENSLCRG00005003032 ENSLCRG00005003034 ENSLCRG00005003038 ENSLCRG00005003049 ENSLCRG00005003052 ENSLCRG00005003054 mhc1zka (ENSLCRG00005003059) ENSLCRG00005003329 ENSLCRG00005003331 ENSLCRG00005003359 ZHX1 (ENSLCRG00005004389) ##9 ENSLCRG00005004391 #9 COL14A1 (ENSLCRG00005004440) #14 ENPP2 (ENSLCRG00005006058) #18 ENSLCRG00005009376 ENSLCRG00005010072 ##22 ENSLCRG00005010091 SCGN (ENSLCRG00005010936) ENSLCRG00005010944 ENSLCRG00005010942 ENSLCRG00005010945 tmem65 (ENSLCRG00005010949) rnf139 (ENSLCRG00005010952) ndufb9 (ENSLCRG00005010954) tatdn1 (ENSLCRG00005010955) ENSLCRG00005010974 pomca (ENSLCRG00005010975) ENSLCRG00005010978 ENSLCRG00005010984 ENSLCRG00005010992 CHRM4 (ENSLCRG00005011002) Gilthead seabream MODERN SPECIES 17 ENSSAUG00010001130 ENSSAUG00010001145 ENSSAUG00010001147 ENSSAUG00010001150 ENSSAUG00010001164 ENSSAUG00010001180 ENSSAUG00010001183 ENSSAUG00010001188 ENSSAUG00010001206 ZHX1 (ENSSAUG00010001262) ##9 ENSSAUG00010001267 #9 COL14A1 (ENSSAUG00010001293) #14 ENSSAUG00010001578 ENPP2 (ENSSAUG00010001887) #18 ENSSAUG00010006023 ENSSAUG00010011011 ##22 ENSSAUG00010000151 ENSSAUG00010000240 SCGN (ENSSAUG00010000369) ENSSAUG00010000380 ENSSAUG00010000385 ENSSAUG00010000390 ENSSAUG00010000396 MTSS1 (ENSSAUG00010000402) tmem65 (ENSSAUG00010000409) rnf139 (ENSSAUG00010000424) tatdn1 (ENSSAUG00010000454) NDUFB9 (ENSSAUG00010000482) ENSSAUG00010000490 pomca (ENSSAUG00010000492) ENSSAUG00010000501 Perciformes ANCESTRAL SPECIES 11 ENSGT01030000234828 ENSGT00940000178053 ENSGT00940000178829 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234589.g.a.i.a.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.g ENSGT00940000153770.l.b.a.a ENSGT01100000263549.j.a.h ENSGT01080000257344.a.b.b.b.b.b.b.a.a.h.a Cottioidei ANCESTRAL SPECIES 26 ENSGT00940000161022 ENSGT00390000012691 ENSGT00390000008815 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155565.b ENSGT00940000155188.A ENSGT00940000165771 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234589.g.a.i.a.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.g ENSGT00940000153770.l.b.a.a ENSGT01100000263549.j.a.h ENSGT01030000234589.g.a.j Lumpfish MODERN SPECIES 2 RING1 (ENSCLMG00005008611) rps18 (ENSCLMG00005008608) VPS52 (ENSCLMG00005008332) ENSCLMG00005008328 ENSCLMG00005008288 ENSCLMG00005008284 mhc1zka (ENSCLMG00005008275) ENSCLMG00005008272 ZHX1 (ENSCLMG00005008271) ##9 ENSCLMG00005008269 #9 ENSCLMG00005003908 #14 ENSCLMG00005003881 ENSCLMG00005003880 ENPP2 (ENSCLMG00005003759) #18 ENSCLMG00005003743 ENSCLMG00005003740 ##22 ENSCLMG00005003739 ENSCLMG00005003685 SCGN (ENSCLMG00005003677) ENSCLMG00005003673 ENSCLMG00005003607 tmem65 (ENSCLMG00005003604) rnf139 (ENSCLMG00005003601) tatdn1 (ENSCLMG00005003487) ndufb9 (ENSCLMG00005003486) pomca (ENSCLMG00005003485) ENSCLMG00005003445 ENSCLMG00005003048 ENSCLMG00005002765 ENSCLMG00005002590 ENSCLMG00005002560 Stickleback MODERN SPECIES 9 VPS52 (ENSGACG00000009772) ENSGACG00000009770 ENSGACG00000009768 ENSGACG00000009763 ENSGACG00000009762 ENSGACG00000009760 ENSGACG00000009753 ENSGACG00000009746 ENSGACG00000009744 mhc1zka (ENSGACG00000009731) ENSGACG00000009728 ENSGACG00000009725 ENSGACG00000009702 #14 ENPP2 (ENSGACG00000009688) #18 ENSGACG00000009662 ENSGACG00000009659 ##22 ENSGACG00000009653 ENSGACG00000009644 ENSGACG00000009643 SCGN (ENSGACG00000009609) ENSGACG00000009606 ENSGACG00000009602 ENSGACG00000009593 tmem65 (ENSGACG00000009573) rnf139 (ENSGACG00000009551) tatdn1 (ENSGACG00000009542) ndufb9 (ENSGACG00000009532) ENSGACG00000009530 ENSGACG00000009528 pomca (ENSGACG00000009521) ENSGACG00000009519 Perciformes_a ANCESTRAL SPECIES 57 ENSGT00390000008815 ENSGT01030000234828 ENSGT00940000178053 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b Channel bull blenny MODERN SPECIES 2 VPS52 (ENSCGOG00000004553) ENSCGOG00000004518 ENSCGOG00000004515 ENSCGOG00000004436 ENSCGOG00000004430 ENSCGOG00000004424 ENSCGOG00000004421 ENSCGOG00000004418 mhc1zka (ENSCGOG00000004350) ENSCGOG00000004106 ZHX1 (ENSCGOG00000004070) ##9 ENSCGOG00000023242 #9 COL14A1 (ENSCGOG00000023173) #14 ENPP2 (ENSCGOG00000022768) #18 ENSCGOG00000022723 ENSCGOG00000022722 ##22 ENSCGOG00000022074 SCGN (ENSCGOG00000022053) ENSCGOG00000022052 SCGN (ENSCGOG00000022051) ENSCGOG00000022050 ENSCGOG00000022048 ENSCGOG00000022047 ENSCGOG00000022045 SCGN (ENSCGOG00000022040) MTSS1 (ENSCGOG00000022031) tmem65 (ENSCGOG00000022028) rnf139 (ENSCGOG00000022026) tatdn1 (ENSCGOG00000021980) ndufb9 (ENSCGOG00000021975) ENSCGOG00000021973 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000178336.d ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b Carangaria ANCESTRAL SPECIES 14 ENSGT01030000234828 ENSGT00940000178829 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.a.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b Pleuronectoidei ANCESTRAL SPECIES 49 ENSGT00940000161022 ENSGT00390000012691 ENSGT00390000008815 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b ENSGT00940000155088.b.a.a ENSGT00940000164382.b.a Tongue sole MODERN SPECIES 9 ZHX1 (ENSCSEG00000018911) ##9 ENSCSEG00000018907 #9 ENSCSEG00000018894 lrp12 (ENSCSEG00000018869) ENSCSEG00000018857 ENSCSEG00000018836 ENSCSEG00000018829 ENSCSEG00000018822 ENSCSEG00000018815 jtb (ENSCSEG00000018809) VPS52 (ENSCSEG00000018798) ENSCSEG00000018775 ENSCSEG00000018734 #14 ENPP2 (ENSCSEG00000018526) #18 ENSCSEG00000018458 ENSCSEG00000018444 ##22 ENSCSEG00000018429 ENSCSEG00000018418 ENSCSEG00000018398 ENSCSEG00000018392 npr1a (ENSCSEG00000018368) ints3 (ENSCSEG00000018322) pdia8 (ENSCSEG00000018270) cct3 (ENSCSEG00000018256) glmp (ENSCSEG00000018246) ENSCSEG00000018241 rps18 (ENSCSEG00000018231) RING1 (ENSCSEG00000018216) rnmt (ENSCSEG00000018206) ENSCSEG00000018203 ENSCSEG00000018185 Turbot MODERN SPECIES 14 ENSSMAG00000021782 ENSSMAG00000014473 ENSSMAG00000014448 ENSSMAG00000014421 ENSSMAG00000014379 ENSSMAG00000035833 ENSSMAG00000014097 ENSSMAG00000025486 ENSSMAG00000014043 ENSSMAG00000024266 ##9 ENSSMAG00000014021 #9 ENSSMAG00000033745 ENSSMAG00000013946 #14 ENSSMAG00000013835 #18 ENSSMAG00000013625 ENSSMAG00000013613 ##22 ENSSMAG00000013601 ENSSMAG00000013560 ENSSMAG00000013529 tmem65 (ENSSMAG00000013522) ENSSMAG00000013507 tatdn1 (ENSSMAG00000013461) ENSSMAG00000013432 ENSSMAG00000026389 ENSSMAG00000037364 ENSSMAG00000026297 ENSSMAG00000030919 ENSSMAG00000013418 ENSSMAG00000022836 ENSSMAG00000032509 ENSSMAG00000025711 Carangaria_A ANCESTRAL SPECIES 36 ENSGT01030000234828 ENSGT00940000178829 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.a.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b Seriola ANCESTRAL SPECIES 68 ENSGT00940000178829 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01060000248670 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT01040000240796 ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b Greater amberjack MODERN SPECIES 95 ENSSDUG00000012335 ENSSDUG00000012389 ENSSDUG00000012399 ENSSDUG00000012423 ENSSDUG00000012434 ENSSDUG00000012436 mhc1zka (ENSSDUG00000012456) ENSSDUG00000012526 ZHX1 (ENSSDUG00000012602) ##9 ENSSDUG00000012617 #9 COL14A1 (ENSSDUG00000012638) #14 ENSSDUG00000012741 ENSSDUG00000012752 ENPP2 (ENSSDUG00000012801) #18 ENSSDUG00000013142 ENSSDUG00000013573 ##22 ENSSDUG00000013593 SCGN (ENSSDUG00000013722) ENSSDUG00000013876 MTSS1 (ENSSDUG00000013886) tmem65 (ENSSDUG00000013926) rnf139 (ENSSDUG00000013943) tatdn1 (ENSSDUG00000013973) ndufb9 (ENSSDUG00000013997) ENSSDUG00000014010 pomca (ENSSDUG00000014034) Yellowtail amberjack MODERN SPECIES 3022 ENSSLDG00000020004 ENSSLDG00000019996 ENSSLDG00000019973 ZHX1 (ENSSLDG00000019958) ##9 ENSSLDG00000019950 ENSSLDG00000019937 ENSSLDG00000019926 ENSSLDG00000019913 #9 ENSSLDG00000019899 ENSSLDG00000019888 COL14A1 (ENSSLDG00000019803) #14 ENPP2 (ENSSLDG00000019717) #18 ENSSLDG00000019702 ENSSLDG00000019675 ENSSLDG00000019665 ENSSLDG00000019654 ##22 CARMIL1 (ENSSLDG00000019588) ENSSLDG00000019572 ENSSLDG00000019565 MTSS1 (ENSSLDG00000019506) tmem65 (ENSSLDG00000019479) rnf139 (ENSSLDG00000019456) tatdn1 (ENSSLDG00000019432) ndufb9 (ENSSLDG00000019419) ENSSLDG00000019391 pomca (ENSSLDG00000019378) ENSSLDG00000019372 ENSSLDG00000019302 ENSSLDG00000019281 ENSSLDG00000019273 ENSSLDG00000019267 Barramundi perch MODERN SPECIES 251 ZHX1 (ENSLCAG00010001490) ##9 ENSLCAG00010001489 #9 COL14A1 (ENSLCAG00010001254) #14 ENPP2 (ENSLCAG00010001062) #18 ENSLCAG00010000956 ENSLCAG00010000906 ##22 CARMIL1 (ENSLCAG00010000458) SCGN (ENSLCAG00010000152) ENSLCAG00010000147 MTSS1 (ENSLCAG00010024441) tmem65 (ENSLCAG00010024426) rnf139 (ENSLCAG00010024418) tatdn1 (ENSLCAG00010024394) ndufb9 (ENSLCAG00010024378) ENSLCAG00010024370 pomca (ENSLCAG00010024362) ENSLCAG00010024358 ENSLCAG00010024353 ENSLCAG00010024348 ENSLCAG00010024345 ENSLCAG00010024341 Anabantaria ANCESTRAL SPECIES 30 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000167252.c.b ENSGT00940000167252.c.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b Anabantoidei ANCESTRAL SPECIES 39 ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a ENSGT01030000234589.g.a.h ENSGT01080000257344.a.b.b.b.b.b.b.b.b.a.a.a.a ENSGT01080000257344.a.b.b.a.a.b.a.b Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 2 chd4a (ENSBSLG00000019870) ENSBSLG00000020322 ENSBSLG00000020326 eno2 (ENSBSLG00000021161) gnb3b (ENSBSLG00000021452) ENSBSLG00000021461 ENSBSLG00000021489 ENSBSLG00000021500 ENSBSLG00000021510 mhc1zka (ENSBSLG00000021513) ZHX1 (ENSBSLG00000021525) ##9 ENSBSLG00000021539 #9 ENSBSLG00000021929 #14 ENPP2 (ENSBSLG00000002510) #18 ENSBSLG00000003022 ENSBSLG00000003025 ##22 ENSBSLG00000003032 ENSBSLG00000003051 ##22 SCGN (ENSBSLG00000003054) MTSS1 (ENSBSLG00000003677) tmem65 (ENSBSLG00000003751) rnf139 (ENSBSLG00000003770) tatdn1 (ENSBSLG00000003861) ndufb9 (ENSBSLG00000003978) ENSBSLG00000003996 ENSBSLG00000004027 ENSBSLG00000004035 ENSBSLG00000004117 VPS52 (ENSBSLG00000004168) rps18 (ENSBSLG00000004383) RING1 (ENSBSLG00000004389) Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000020326 eno2 (ENSBSLG00000021161) gnb3b (ENSBSLG00000021452) ENSBSLG00000021461 ENSBSLG00000021489 ENSBSLG00000021500 ENSBSLG00000021510 mhc1zka (ENSBSLG00000021513) ZHX1 (ENSBSLG00000021525) ##9 ENSBSLG00000021539 #9 ENSBSLG00000021929 #14 ENPP2 (ENSBSLG00000002510) #18 ENSBSLG00000003022 ENSBSLG00000003025 ##22 ENSBSLG00000003032 ENSBSLG00000003051 ##22 SCGN (ENSBSLG00000003054) MTSS1 (ENSBSLG00000003677) tmem65 (ENSBSLG00000003751) rnf139 (ENSBSLG00000003770) tatdn1 (ENSBSLG00000003861) ndufb9 (ENSBSLG00000003978) ENSBSLG00000003996 ENSBSLG00000004027 ENSBSLG00000004035 ENSBSLG00000004117 VPS52 (ENSBSLG00000004168) rps18 (ENSBSLG00000004383) RING1 (ENSBSLG00000004389) GRIK5 (ENSBSLG00000005172) ENSBSLG00000006103 Climbing perch MODERN SPECIES 2 ENSATEG00000015183 ENSATEG00000025208 ENSATEG00000015152 ENSATEG00000015144 ENSATEG00000014596 ENSATEG00000025337 ENSATEG00000014777 ENSATEG00000014302 ENSATEG00000014278 ##9 ENSATEG00000014268 #9 ENSATEG00000014237 ENSATEG00000029515 ENSATEG00000014155 #14 ENSATEG00000014068 #18 ENSATEG00000014039 ENSATEG00000014031 ##22 ENSATEG00000014003 ENSATEG00000013901 ENSATEG00000013800 tmem65 (ENSATEG00000013771) ENSATEG00000013738 tatdn1 (ENSATEG00000013700) ENSATEG00000013671 ENSATEG00000013654 ENSATEG00000027354 ENSATEG00000013547 ENSATEG00000029787 ENSATEG00000013557 ENSATEG00000013644 ENSATEG00000029044 ENSATEG00000015481 Zig-zag eel MODERN SPECIES 2 ENSMAMG00000020965 ENSMAMG00000025430 ENSMAMG00000026975 ENSMAMG00000025460 ENSMAMG00000020178 ENSMAMG00000020199 ENSMAMG00000020161 ENSMAMG00000020153 ##9 ENSMAMG00000020149 #9 ENSMAMG00000025122 ENSMAMG00000025601 ENSMAMG00000020118 #14 ENSMAMG00000020070 #18 ENSMAMG00000024503 ENSMAMG00000020053 ENSMAMG00000020044 ##22 ENSMAMG00000019997 ENSMAMG00000019974 ENSMAMG00000019950 tmem65 (ENSMAMG00000019946) ENSMAMG00000019937 tatdn1 (ENSMAMG00000019919) ENSMAMG00000019910 ENSMAMG00000019905 ENSMAMG00000025188 ENSMAMG00000019537 ENSMAMG00000027142 ENSMAMG00000019884 ENSMAMG00000019857 ENSMAMG00000025278 ENSMAMG00000019829 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b ENSGT00940000155088.b.a.a Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.c.a ENSGT01030000234589.g.a.f ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b ENSGT01090000260033.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d ENSGT01080000257344.a.b.b.a.a.a.b Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.b.a.a.c.a ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d ENSGT01030000234589.g.a.f ENSGT01100000263549.j.a ENSGT01100000263549.j.b.h Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00390000008815 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A.z #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 207 ENSKMAG00000007075 ENSKMAG00000007109 ENSKMAG00000007160 ENSKMAG00000007172 ENSKMAG00000007188 ENSKMAG00000007220 ENSKMAG00000007241 ZHX1 (ENSKMAG00000007292) ##9 ENSKMAG00000007314 #9 COL14A1 (ENSKMAG00000007357) #14 ENSKMAG00000007472 ENSKMAG00000007496 ENSKMAG00000007529 ENSKMAG00000007627 #18 ENSKMAG00000007820 ENSKMAG00000007913 ##22 ENSKMAG00000007963 ##22 CARMIL1 (ENSKMAG00000008007) SCGN (ENSKMAG00000008057) MTSS1 (ENSKMAG00000008089) tmem65 (ENSKMAG00000008147) rnf139 (ENSKMAG00000008173) tatdn1 (ENSKMAG00000008222) ndufb9 (ENSKMAG00000008275) ENSKMAG00000008298 pomca (ENSKMAG00000008315) ENSKMAG00000008329 ENSKMAG00000008373 ENSKMAG00000008396 Mangrove rivulus MODERN SPECIES 207 ENSKMAG00000007109 ENSKMAG00000007160 ENSKMAG00000007172 ENSKMAG00000007188 ENSKMAG00000007220 ENSKMAG00000007241 ZHX1 (ENSKMAG00000007292) ##9 ENSKMAG00000007314 #9 COL14A1 (ENSKMAG00000007357) #14 ENSKMAG00000007472 ENSKMAG00000007496 ENSKMAG00000007529 ENSKMAG00000007627 #18 ENSKMAG00000007820 ENSKMAG00000007913 ##22 ENSKMAG00000007963 ##22 CARMIL1 (ENSKMAG00000008007) SCGN (ENSKMAG00000008057) MTSS1 (ENSKMAG00000008089) tmem65 (ENSKMAG00000008147) rnf139 (ENSKMAG00000008173) tatdn1 (ENSKMAG00000008222) ndufb9 (ENSKMAG00000008275) ENSKMAG00000008298 pomca (ENSKMAG00000008315) ENSKMAG00000008329 ENSKMAG00000008373 ENSKMAG00000008396 Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1628 ENSNFUG00015014375 ENSNFUG00015014365 ENSNFUG00015014301 ENSNFUG00015014284 ENSNFUG00015014104 ENSNFUG00015014078 Nfu_g_1_010045 (ENSNFUG00015022604) ZHX1 (ENSNFUG00015022591) ##9 ENSNFUG00015022589 ENSNFUG00015022588 #9 COL14A1 (ENSNFUG00015022458) #14 ENPP2 (ENSNFUG00015021886) #18 ENSNFUG00015021846 ENSNFUG00015021081 ENSNFUG00015021026 ##22 ENSNFUG00015021025 ##22 ENSNFUG00015020973 SCGN (ENSNFUG00015020965) SCGN (ENSNFUG00015020962) ENSNFUG00015020961 MTSS1 (ENSNFUG00015020861) TMEM65 (ENSNFUG00015020837) RNF139 (ENSNFUG00015020833) tatdn1 (ENSNFUG00015020512) NDUFB9 (ENSNFUG00015020501) ENSNFUG00015020500 pomca (ENSNFUG00015020495) ENSNFUG00015020491 ENSNFUG00015020489 ENSNFUG00015020486 ENSNFUG00015020484 Turquoise killifish MODERN SPECIES 1628 ENSNFUG00015014393 ENSNFUG00015014375 ENSNFUG00015014365 ENSNFUG00015014301 ENSNFUG00015014284 ENSNFUG00015014104 ENSNFUG00015014078 Nfu_g_1_010045 (ENSNFUG00015022604) ZHX1 (ENSNFUG00015022591) ##9 ENSNFUG00015022589 ENSNFUG00015022588 #9 COL14A1 (ENSNFUG00015022458) #14 ENPP2 (ENSNFUG00015021886) #18 ENSNFUG00015021846 ENSNFUG00015021081 ENSNFUG00015021026 ##22 ENSNFUG00015021025 ##22 ENSNFUG00015020973 SCGN (ENSNFUG00015020965) SCGN (ENSNFUG00015020962) ENSNFUG00015020961 MTSS1 (ENSNFUG00015020861) TMEM65 (ENSNFUG00015020837) RNF139 (ENSNFUG00015020833) tatdn1 (ENSNFUG00015020512) NDUFB9 (ENSNFUG00015020501) ENSNFUG00015020500 pomca (ENSNFUG00015020495) ENSNFUG00015020491 ENSNFUG00015020489 ENSNFUG00015020486 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES 24 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.a.b ENSGT01090000260033.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b Poecilia ANCESTRAL SPECIES 69 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.a.b ENSGT01090000260033.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b ENSGT01030000234589.g.a.f.e.a.a.b.a.a NAME_6 ANCESTRAL SPECIES 154 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.t ENSGT01100000263531.A.s.a ENSGT00940000177196 ENSGT01100000263531.A.s.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b ENSGT01030000234589.g.a.f.e.a.a.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d ENSGT01030000234589.g.a.f.e.a.a.b.b.a.a Amazon molly MODERN SPECIES 485 ENSPFOG00000004380 ENSPFOG00000004327 ENSPFOG00000004282 ENSPFOG00000004101 ENSPFOG00000004058 ENSPFOG00000003921 ZHX1 (ENSPFOG00000003808) ##9 ZHX2 (ENSPFOG00000003780) #9 ENSPFOG00000023898 ENSPFOG00000022790 ENSPFOG00000003757 ENSPFOG00000002928 #14 ENSPFOG00000024352 #15 ENPP2 (ENSPFOG00000002408) #18 ENSPFOG00000001997 ENSPFOG00000001850 ##22 ENSPFOG00000001835 ##22 CARMIL1 (ENSPFOG00000001573) SCGN (ENSPFOG00000001412) MTSS1 (ENSPFOG00000001250) tmem65 (ENSPFOG00000001120) rnf139 (ENSPFOG00000001029) tatdn1 (ENSPFOG00000000928) ndufb9 (ENSPFOG00000000844) ENSPFOG00000000783 pomca (ENSPFOG00000000757) ENSPFOG00000000747 ENSPFOG00000000733 ENSPFOG00000000725 ENSPFOG00000020133 ENSPFOG00000000720 Sailfin molly MODERN SPECIES 1399 cbr1 (ENSPLAG00000009524) cbr1 (ENSPLAG00000009692) ENSPLAG00000009725 #14 ENPP2 (ENSPLAG00000009788) #18 ENSPLAG00000009992 ENSPLAG00000000223 ##22 ENSPLAG00000010081 ##22 Platyfish MODERN SPECIES 4 ENSXMAG00000021850 ENSXMAG00000023139 ENSXMAG00000007599 ENSXMAG00000028100 ENSXMAG00000001518 ZHX1 (ENSXMAG00000024212) ##9 ENSXMAG00000029908 #9 ENSXMAG00000026781 COL14A1 (ENSXMAG00000001458) #14 ENSXMAG00000029287 ENSXMAG00000001491 ENSXMAG00000020941 ENPP2 (ENSXMAG00000001408) #18 ENSXMAG00000028282 ENSXMAG00000027067 ENSXMAG00000022931 ##22 ENSXMAG00000001405 ##22 CARMIL1 (ENSXMAG00000001342) SCGN (ENSXMAG00000001316) MTSS1 (ENSXMAG00000001289) tmem65 (ENSXMAG00000028955) rnf139 (ENSXMAG00000001260) tatdn1 (ENSXMAG00000001248) ndufb9 (ENSXMAG00000001240) ENSXMAG00000001233 pomca (ENSXMAG00000029613) ENSXMAG00000024213 ENSXMAG00000022950 ENSXMAG00000029336 ENSXMAG00000021338 ENSXMAG00000024861 Poeciliinae ANCESTRAL SPECIES 24 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.a.b ENSGT01090000260033.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b ENSGT01030000234589.g.a.f.e.a.a.b.a.a Poecilia ANCESTRAL SPECIES 69 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00940000177196 ENSGT01060000248670 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.a.b ENSGT01090000260033.b ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b ENSGT01030000234589.g.a.f.e.a.a.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d NAME_6 ANCESTRAL SPECIES 154 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.t ENSGT01100000263531.A.s.a ENSGT00940000177196 ENSGT01100000263531.A.s.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00520000055667.i #15 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.o ##22 ENSGT00940000155167.b.a.b.p ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153770.l.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.b.b.a.b.d.a.b.a.a.b ENSGT01030000234589.g.a.f.e.a.a.b.a.a ENSGT01080000257344.a.b.b.b.b.b.b.a.a.d ENSGT01030000234589.g.a.f.e.a.a.b.b.a.a ENSGT01080000257344.a.b.b.a.a.b.b Sailfin molly MODERN SPECIES 1399 cbr1 (ENSPLAG00000009524) cbr1 (ENSPLAG00000009692) ENSPLAG00000009725 #14 ENPP2 (ENSPLAG00000009788) #18 ENSPLAG00000009992 ENSPLAG00000000223 ##22 ENSPLAG00000010081 ##22 Amazon molly MODERN SPECIES 485 ENSPFOG00000004327 ENSPFOG00000004282 ENSPFOG00000004101 ENSPFOG00000004058 ENSPFOG00000003921 ZHX1 (ENSPFOG00000003808) ##9 ZHX2 (ENSPFOG00000003780) #9 ENSPFOG00000023898 ENSPFOG00000022790 ENSPFOG00000003757 ENSPFOG00000002928 #14 ENSPFOG00000024352 #15 ENPP2 (ENSPFOG00000002408) #18 ENSPFOG00000001997 ENSPFOG00000001850 ##22 ENSPFOG00000001835 ##22 CARMIL1 (ENSPFOG00000001573) SCGN (ENSPFOG00000001412) MTSS1 (ENSPFOG00000001250) tmem65 (ENSPFOG00000001120) rnf139 (ENSPFOG00000001029) tatdn1 (ENSPFOG00000000928) ndufb9 (ENSPFOG00000000844) ENSPFOG00000000783 pomca (ENSPFOG00000000757) ENSPFOG00000000747 ENSPFOG00000000733 ENSPFOG00000000725 ENSPFOG00000020133 ENSPFOG00000000720 ENSPFOG00000000744 Platyfish MODERN SPECIES 4 ENSXMAG00000023139 ENSXMAG00000007599 ENSXMAG00000028100 ENSXMAG00000001518 ZHX1 (ENSXMAG00000024212) ##9 ENSXMAG00000029908 #9 ENSXMAG00000026781 COL14A1 (ENSXMAG00000001458) #14 ENSXMAG00000029287 ENSXMAG00000001491 ENSXMAG00000020941 ENPP2 (ENSXMAG00000001408) #18 ENSXMAG00000028282 ENSXMAG00000027067 ENSXMAG00000022931 ##22 ENSXMAG00000001405 ##22 CARMIL1 (ENSXMAG00000001342) SCGN (ENSXMAG00000001316) MTSS1 (ENSXMAG00000001289) tmem65 (ENSXMAG00000028955) rnf139 (ENSXMAG00000001260) tatdn1 (ENSXMAG00000001248) ndufb9 (ENSXMAG00000001240) ENSXMAG00000001233 pomca (ENSXMAG00000029613) ENSXMAG00000024213 ENSXMAG00000022950 ENSXMAG00000029336 ENSXMAG00000021338 ENSXMAG00000024861 ENSXMAG00000024513 NAME_4 ANCESTRAL SPECIES 220 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000153094 ENSGT00940000153770.k.a ENSGT01030000234589.g.a.f.e.b.b.b.a ENSGT01080000257344.a.b.b.a.a.b.b ENSGT01080000257344.a.b.b.b.b.b.b.b.b.b ENSGT01030000234589.g.a.f.e.b.a Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 224 COL14A1 (ENSCVAG00000002622) #14 ENSCVAG00000002592 ENPP2 (ENSCVAG00000002583) #18 ENSCVAG00000002542 ENSCVAG00000002535 ENSCVAG00000002521 ##22 ENSCVAG00000002512 ##22 ENSCVAG00000002508 SCGN (ENSCVAG00000002483) MTSS1 (ENSCVAG00000002469) tmem65 (ENSCVAG00000002408) rnf139 (ENSCVAG00000002402) tatdn1 (ENSCVAG00000002395) ndufb9 (ENSCVAG00000002379) ENSCVAG00000002371 ENSCVAG00000002365 ENSCVAG00000002359 ENSCVAG00000002358 ENSCVAG00000002353 ENSCVAG00000002348 ENSCVAG00000002344 ENSCVAG00000002341 Sheepshead minnow MODERN SPECIES 224 COL14A1 (ENSCVAG00000002622) #14 ENSCVAG00000002592 ENPP2 (ENSCVAG00000002583) #18 ENSCVAG00000002542 ENSCVAG00000002535 ENSCVAG00000002521 ##22 ENSCVAG00000002512 ##22 ENSCVAG00000002508 SCGN (ENSCVAG00000002483) MTSS1 (ENSCVAG00000002469) tmem65 (ENSCVAG00000002408) rnf139 (ENSCVAG00000002402) tatdn1 (ENSCVAG00000002395) ndufb9 (ENSCVAG00000002379) ENSCVAG00000002371 ENSCVAG00000002365 ENSCVAG00000002359 ENSCVAG00000002358 ENSCVAG00000002353 ENSCVAG00000002348 ENSCVAG00000002344 Mummichog DUPLICATION Mummichog MODERN SPECIES 409 ENSFHEG00000013367 ENPP2 (ENSFHEG00000013336) #18 ENSFHEG00000012807 ENSFHEG00000012794 ##22 ENSFHEG00000012774 ENSFHEG00000012769 ##22 ENSFHEG00000012749 SCGN (ENSFHEG00000012598) ENSFHEG00000012487 MTSS1 (ENSFHEG00000012470) tmem65 (ENSFHEG00000012464) rnf139 (ENSFHEG00000012450) tatdn1 (ENSFHEG00000012426) ndufb9 (ENSFHEG00000012378) ENSFHEG00000012361 pomca (ENSFHEG00000012355) ENSFHEG00000012346 Mummichog MODERN SPECIES 409 ENSFHEG00000013367 ENPP2 (ENSFHEG00000013336) #18 ENSFHEG00000012807 ENSFHEG00000012794 ##22 ENSFHEG00000012774 ENSFHEG00000012769 ##22 ENSFHEG00000012749 SCGN (ENSFHEG00000012598) ENSFHEG00000012487 MTSS1 (ENSFHEG00000012470) tmem65 (ENSFHEG00000012464) rnf139 (ENSFHEG00000012450) tatdn1 (ENSFHEG00000012426) ndufb9 (ENSFHEG00000012378) ENSFHEG00000012361 pomca (ENSFHEG00000012355) ENSFHEG00000012346 Oryzias ANCESTRAL SPECIES 24 ENSGT00940000155188.A ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.y.b ENSGT00940000177196.d ENSGT01100000263531.A.y.a.b ENSGT00940000177196.c ENSGT01100000263531.A.y.a.a ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b Oryzias_b ANCESTRAL SPECIES 82 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.y.b.a.a ENSGT01100000263531.A.z ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892.b ENSGT00940000172892.a ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.a.a.a.b.b ENSGT01100000263476.B.b.b.a.b.b.b.b.b Indian medaka MODERN SPECIES 29 ENSOMEG00000011999 ENSOMEG00000012041 ENSOMEG00000012053 ENSOMEG00000012095 ENSOMEG00000012131 ENSOMEG00000012165 ENSOMEG00000012215 ZHX1 (ENSOMEG00000012265) ##9 ENSOMEG00000000312 #9 ENSOMEG00000012312 ENSOMEG00000012346 ENSOMEG00000012375 COL14A1 (ENSOMEG00000012432) #14 ENPP2 (ENSOMEG00000012494) #18 ENSOMEG00000012534 ENSOMEG00000012598 ##22 ENSOMEG00000012672 SCGN (ENSOMEG00000012710) MTSS1 (ENSOMEG00000012856) tmem65 (ENSOMEG00000012895) rnf139 (ENSOMEG00000012924) tatdn1 (ENSOMEG00000012956) ndufb9 (ENSOMEG00000012977) ENSOMEG00000013011 pomca (ENSOMEG00000013037) ENSOMEG00000013050 ENSOMEG00000013081 ENSOMEG00000013093 ENSOMEG00000013103 ENSOMEG00000013110 ENSOMEG00000013119 Javanese ricefish MODERN SPECIES 2 ENSOJAG00000013618 ENSOJAG00000013548 ENSOJAG00000013418 ZHX1 (ENSOJAG00000013394) ##9 ZHX2 (ENSOJAG00000013378) #9 ENSOJAG00000013362 ENSOJAG00000013348 ENSOJAG00000013336 ENSOJAG00000013302 ENSOJAG00000013274 ENSOJAG00000013265 ENSOJAG00000013254 COL14A1 (ENSOJAG00000011691) #14 ENPP2 (ENSOJAG00000010515) #18 ENSOJAG00000009354 ENSOJAG00000009230 ##22 ENSOJAG00000009221 CARMIL1 (ENSOJAG00000007588) SCGN (ENSOJAG00000007444) MTSS1 (ENSOJAG00000007364) tmem65 (ENSOJAG00000007345) rnf139 (ENSOJAG00000007077) ndufb9 (ENSOJAG00000006736) ENSOJAG00000006730 pomca (ENSOJAG00000006719) ENSOJAG00000006706 ENSOJAG00000006681 ENSOJAG00000006659 ENSOJAG00000006639 ENSOJAG00000006596 ENSOJAG00000006573 Oryzias_a ANCESTRAL SPECIES 121 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b Chinese medaka MODERN SPECIES 625 ENPP2 (ENSOSIG00000016926) #18 ENSOSIG00000017833 ENSOSIG00000017871 ENSOSIG00000017992 ##22 CARMIL1 (ENSOSIG00000018036) SCGN (ENSOSIG00000018714) Japanese Medaka HdrR MODERN SPECIES 2 ENSORLG00000024936 ENSORLG00000027279 ENSORLG00000030027 ENSORLG00000022006 ENSORLG00000026728 ENSORLG00000024417 ENSORLG00000001015 ENSORLG00000026188 ENSORLG00000024165 ENSORLG00000026029 ENSORLG00000026566 ENSORLG00000000968 COL14A1 (ENSORLG00000000896) #14 ENSORLG00000000802 #18 ENSORLG00000000744 opga (ENSORLG00000000705) ##22 ENSORLG00000000698 SCGN (ENSORLG00000023750) ENSORLG00000000662 tmem65 (ENSORLG00000000647) rnf139 (ENSORLG00000029345) tatdn1 (ENSORLG00000029003) ndufb9 (ENSORLG00000000638) ENSORLG00000000631 ENSORLG00000026284 ENSORLG00000030614 ENSORLG00000026932 ENSORLG00000027856 ENSORLG00000027793 ENSORLG00000026095 orla-uia1 (ENSORLG00000020349) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT01030000234828 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.b ENSGT00940000155088.b.a.a Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.m.a.b ENSGT00940000177196 ENSGT01100000263531.A.m.a.a ENSGT01060000248670 ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.a.a ENSGT00940000153675.a.a.a.a.a.b.a.b.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000176878 ENSGT01100000263531.A.m.a.b.a.b ENSGT01100000263531.A.m.a.a.c ENSGT01060000248670 ENSGT01100000263531.A.m.a.b.a.a ENSGT00940000177196 ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.a.b.a.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.m.a.b.a.b ENSGT01060000248670 ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT01030000234575.c.a.a.a.a.a.b.a.a.f ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.a.a Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000177573 ENSGT00940000165771 ENSGT00940000176878 ENSGT01100000263531.A.m.a.b.a.b.a ENSGT01060000248670 ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT01030000234575.c.a.a.a.a.a.b.a.a.f ENSGT00940000172892 ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.a.a Burton s mouthbrooder MODERN SPECIES 697 ENSHBUG00000005906 ENSHBUG00000005891 #14 ENPP2 (ENSHBUG00000005834) #18 ENSHBUG00000005765 ENSHBUG00000005744 ##22 ENSHBUG00000005731 SCGN (ENSHBUG00000005681) ENSHBUG00000005657 tmem65 (ENSHBUG00000005620) ndufb9 (ENSHBUG00000005589) ENSHBUG00000005575 pomca (ENSHBUG00000005565) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01060000248670.e.a.a ENSGT01100000263531.A.m.a.b.a.b.a ENSGT01100000263531.A.m.a.b.a.a.a ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT01030000234575.c.a.a.a.a.a.b.a.a.f ENSGT00940000153769.F.m #14 ENSGT00940000177497 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT00940000176860.g.b.b ENSGT01030000234575.c.a.a.b ENSGT01000000214413.b.a.b.a.b ENSGT00390000013354.b.b ENSGT00950000182805.a.a.b.a.c.b ENSGT00940000153675.a.a.a.a.a.b.a.a Haplochromini_B ANCESTRAL SPECIES 75 ENSGT00940000155565.b ENSGT00940000165771 ENSGT00940000176878 ENSGT01060000248670.e.a.a ENSGT01100000263531.A.m.a.b.a.b.a ENSGT01100000263531.A.m.a.b.a.a.a ENSGT01100000263531.A.m.b ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT01030000234575.c.a.a.a.a.a.b.a.a.f ENSGT01030000235041.D ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000017802.c ENSGT00940000158932 ENSGT00940000156272 ENSGT00390000005809 ENSGT00940000164041.b.b ENSGT00390000016811.g.g.b ENSGT01080000257344.a.b.b.b.b.b.a.a.a.a.b.a.a.b.a.b.b.a.a.b.b.b ENSGT01080000257344.a.b.b.b.b.b.a.a.a.a.b.a.a.a.a.a.a.a.b.a.a.a ENSGT01030000234589.g.a.e.a.e.a.a.a.c.b Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026970 ENSMZEG00005026972 ENSMZEG00005026977 ENSMZEG00005027031 ENSMZEG00005027033 ENSMZEG00005027035 ENSMZEG00005027036 ENSMZEG00005027038 ENSMZEG00005027041 ZHX1 (ENSMZEG00005027044) ##9 ENSMZEG00005027046 #9 ENSMZEG00005027047 COL14A1 (ENSMZEG00005027050) #14 ENPP2 (ENSMZEG00005027057) #18 ENSMZEG00005027061 ENSMZEG00005027063 ##22 ENSMZEG00005027065 SCGN (ENSMZEG00005027067) MTSS1 (ENSMZEG00005027068) tmem65 (ENSMZEG00005027069) rnf139 (ENSMZEG00005027070) ENSMZEG00005027071 tatdn1 (ENSMZEG00005027072) ndufb9 (ENSMZEG00005027074) ENSMZEG00005027075 pomca (ENSMZEG00005027076) ENSMZEG00005027083 ENSMZEG00005027084 ENSMZEG00005027085 ENSMZEG00005027086 ENSMZEG00005027088 Eastern happy MODERN SPECIES 13 ENSACLG00000011500 ENSACLG00000011505 ENSACLG00000011515 ENSACLG00000011528 ZHX1 (ENSACLG00000011563) ##9 ENSACLG00000011723 #9 ENSACLG00000011734 ENSACLG00000011860 ENSACLG00000011942 ENSACLG00000011981 ENSACLG00000012103 ENSACLG00000012113 COL14A1 (ENSACLG00000012136) #14 ENPP2 (ENSACLG00000012318) #18 ENSACLG00000012456 ENSACLG00000012568 ##22 ENSACLG00000012592 SCGN (ENSACLG00000012647) MTSS1 (ENSACLG00000012669) tmem65 (ENSACLG00000012814) rnf139 (ENSACLG00000012835) tatdn1 (ENSACLG00000012879) ndufb9 (ENSACLG00000012910) ENSACLG00000012922 pomca (ENSACLG00000012942) ENSACLG00000012944 ENSACLG00000012952 ENSACLG00000012955 ENSACLG00000012960 ENSACLG00000012994 ENSACLG00000012997 P. nyererei MODERN SPECIES 634 ENSPNYG00000023699 #14 ENSPNYG00000023700 ENPP2 (ENSPNYG00000023702) #18 ENSPNYG00000023705 ENSPNYG00000023707 ##22 ENSPNYG00000023708 SCGN (ENSPNYG00000023709) MTSS1 (ENSPNYG00000023710) tmem65 (ENSPNYG00000023711) tatdn1 (ENSPNYG00000023712) ndufb9 (ENSPNYG00000023713) ENSPNYG00000023714 pomca (ENSPNYG00000023716) Lyretail cichlid MODERN SPECIES 515 ENSNBRG00000023255 #14 ENPP2 (ENSNBRG00000023272) #18 ENSNBRG00000023296 ENSNBRG00000023310 ##22 SCGN (ENSNBRG00000023341) SCGN (ENSNBRG00000000265) rnf139 (ENSNBRG00000000281) tatdn1 (ENSNBRG00000000350) ndufb9 (ENSNBRG00000000456) pomca (ENSNBRG00000000535) ENSNBRG00000000665 Nile tilapia MODERN SPECIES 13 ENSONIG00000042042 ENSONIG00000036719 ENSONIG00000032867 ENSONIG00000031871 ENSONIG00000038044 ENSONIG00000035659 ENSONIG00000028014 ENSONIG00000031788 ENSONIG00000036120 ENSONIG00000038283 ENSONIG00000028532 COL14A1 (ENSONIG00000007189) #14 ENPP2 (ENSONIG00000007198) #18 ENSONIG00000042700 ENSONIG00000007202 ENSONIG00000007203 ##22 ENSONIG00000007204 SCGN (ENSONIG00000007210) MTSS1 (ENSONIG00000007217) tmem65 (ENSONIG00000033594) rnf139 (ENSONIG00000007225) tatdn1 (ENSONIG00000007228) ndufb9 (ENSONIG00000007229) ENSONIG00000007236 POMC (ENSONIG00000039325) ENSONIG00000032775 ENSONIG00000033168 ENSONIG00000039393 ENSONIG00000030537 ENSONIG00000036916 ENSONIG00000031234 Midas cichlid MODERN SPECIES 795 ENSACIG00000012330 COL14A1 (ENSACIG00000012236) #14 ENPP2 (ENSACIG00000012098) #18 ENSACIG00000012076 ENSACIG00000012031 ENSACIG00000012010 ##22 Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005008035 ENSMMDG00005007985 psmb10 (ENSMMDG00005007974) selenoh (ENSMMDG00005007970) ENSMMDG00005007968 ENSMMDG00005007966 mhc1zka (ENSMMDG00005007962) ATAD2 (ENSMMDG00005007957) ZHX1 (ENSMMDG00005007953) ##9 ZHX2 (ENSMMDG00005007952) #9 ENSMMDG00005007949 COL14A1 (ENSMMDG00005007941) #14 ENSMMDG00005007936 ENPP2 (ENSMMDG00005007612) #18 ENSMMDG00005007565 ENSMMDG00005007549 ##22 SCGN (ENSMMDG00005007541) ENSMMDG00005004496 ENSMMDG00005004263 ENSMMDG00005004086 tmem65 (ENSMMDG00005004046) rnf139 (ENSMMDG00005004033) tatdn1 (ENSMMDG00005003355) ndufb9 (ENSMMDG00005003326) ENSMMDG00005003325 ENSMMDG00005003322 ENSMMDG00005003320 ENSMMDG00005003317 ENSMMDG00005003314 ENSMMDG00005003123 ENSMMDG00005003105 Cod MODERN SPECIES 14 ENSGMOG00000036428 ENSGMOG00000022731 ENSGMOG00000037053 ENSGMOG00000033292 ENSGMOG00000036733 ENSGMOG00000023214 ENSGMOG00000015578 ENSGMOG00000022952 ENSGMOG00000031984 ENSGMOG00000032089 ENSGMOG00000037145 ##9 ENSGMOG00000024401 ENSGMOG00000031601 #14 ENSGMOG00000004068 #18 ENSGMOG00000001988 ENSGMOG00000001968 ##22 ENSGMOG00000019464 ENSGMOG00000019452 ENSGMOG00000024718 ENSGMOG00000035034 ENSGMOG00000024682 tatdn1 (ENSGMOG00000003653) ENSGMOG00000003639 ENSGMOG00000019735 ENSGMOG00000032090 ENSGMOG00000008533 ENSGMOG00000029122 ENSGMOG00000028739 ENSGMOG00000008526 MINDY1 (ENSGMOG00000010531) ENSGMOG00000010371 Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234974 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000180480 ENSGT00940000155565.b ENSGT00940000161047 ENSGT00940000165771 ENSGT01100000263531.A ENSGT00940000177196 ENSGT00550000074694.a.l ENSGT00950000182893.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d #9 ENSGT00940000153769.F.m #14 ENSGT00940000155778.A #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b ##22 ENSGT00940000155112.B.b ENSGT00950000183108.a.d ENSGT00950000183156.a.b.b.b.b.a.c.b ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 ENSGT00390000017802.c ENSGT00940000163467.a.a.b ENSGT00940000158641.a.a ENSGT00390000003488.b.a.a ENSGT00940000154412.B.a.a ENSGT00940000167560 ENSGT00390000009895 ENSGT00940000160112 ENSGT00940000165419.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 105 ENSGT00940000155565.b.c ENSGT00940000161047.f ENSGT01100000263514.B.`b ENSGT00980000199469.c.a.a ENSGT01100000263531.A.tb.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.d ENSGT00550000074694.a.l.a ENSGT00950000182893.a.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d.c #9 ENSGT00940000153769.F.m.j #14 ENSGT00520000055667.h #15 ENSGT00940000155778.A.x #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.u ##22 ENSGT00940000155112.B.b.i ENSGT00950000183108.a.d.l ENSGT00950000183156.a.b.b.b.b.a.c.b.h ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932.e ENSGT00390000017802.c.e ENSGT00940000158641.a.a.c ENSGT00390000003488.b.a.a.b ENSGT00940000154412.B.a.a.a ENSGT00940000167560.b.a ENSGT00390000009895.e ENSGT00940000160112.f.b.b ENSGT00940000165419.b.a ENSGT00450000040262.j.b Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000160798.a ENSGT00940000155188.A.g.b ENSGT00940000180480.b ENSGT00940000155565.b.c ENSGT00940000161047.f ENSGT01100000263514.B.`b ENSGT00980000199469.c.a.a ENSGT01100000263531.A.tb.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.d.a ENSGT00550000074694.a.l.a ENSGT00950000182893.a.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d.c #9 ENSGT00940000153769.F.m.j #14 ENSGT00940000155778.A.x #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.u ##22 ENSGT00940000155112.B.b.i ENSGT00950000183108.a.d.l ENSGT00950000183156.a.b.b.b.b.a.c.b.h ENSGT00390000005809.x.a.b ENSGT00940000156272 ENSGT00940000158932.e ENSGT00390000017802.c.e ENSGT00940000163467.a.a.b.b ENSGT00940000158641.a.a.c ENSGT00390000003488.b.a.a.b ENSGT00940000154412.B.a.a.a ENSGT00940000167560.b.a ENSGT00390000009895.e ENSGT00940000160112.f.b.b ENSGT00990000212329 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000160798.a ENSGT00940000155188.A.g.b ENSGT00940000180480.a ENSGT00940000155565.b.c ENSGT00940000161047.f ENSGT01100000263514.B.`b ENSGT00980000199469.c.a.a ENSGT01100000263531.A.tb.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.d.a ENSGT00550000074694.a.l.a ENSGT00950000182893.a.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d.c #9 ENSGT00940000153769.F.m.j #14 ENSGT00940000155778.A.x #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.u ##22 ENSGT00940000155112.B.b.i ENSGT00950000183108.a.d.l ENSGT00950000183156.a.b.b.b.b.a.c.b.h ENSGT00390000005809.x.a.b ENSGT00940000156272 ENSGT00940000158932.e ENSGT00390000017802.c.e ENSGT00940000163467.a.a.b.b ENSGT00940000158641.a.a.c ENSGT00390000003488.b.a.a.b ENSGT00940000154412.B.a.a.a ENSGT00940000167560.b.a ENSGT00390000009895.e ENSGT00940000160112.f.b.b ENSGT00990000212329 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000160798.a ENSGT00940000155188.A.g.b ENSGT00940000180480.a ENSGT00940000155565.b.c ENSGT00940000161047.f ENSGT01100000263514.B.`b ENSGT00980000199469.c.a.a ENSGT01100000263531.A.tb.b ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.d.a ENSGT00550000074694.a.l.a ENSGT00950000182893.a.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d.c #9 ENSGT00940000153769.F.m.j #14 ENSGT00940000155778.A.x #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.u ##22 ENSGT00940000155112.B.b.i ENSGT00950000183108.a.d.l ENSGT00950000183156.a.b.b.b.b.a.c.b.h ENSGT00390000005809.x.b ENSGT00940000156272 ENSGT00940000158932.e ENSGT00390000017802.c.e ENSGT00940000158641.a.a.c ENSGT00390000003488.b.a.a.b ENSGT00940000154412.B.a.a.a ENSGT00940000167560.b.a ENSGT00390000009895.e ENSGT00940000160112.f.b.b ENSGT00990000212329 ENSGT00940000165419.b.a Coho salmon MODERN SPECIES 8 VPS52 (ENSOKIG00005046823) ENSOKIG00005046802 ENSOKIG00005046755 ENSOKIG00005046747 ENSOKIG00005046743 ENSOKIG00005046730 PSMB10 (ENSOKIG00005046699) ENSOKIG00005046640 ENSOKIG00005046622 ATAD2 (ENSOKIG00005045862) ZHX1 (ENSOKIG00005045793) ##9 ENSOKIG00005045784 #9 COL14A1 (ENSOKIG00005045513) #14 ENPP2 (ENSOKIG00005042065) #18 ENSOKIG00005041784 ENSOKIG00005041741 ##22 ENSOKIG00005037800 SCGN (ENSOKIG00005037281) MTSS1 (ENSOKIG00005036916) tatdn1 (ENSOKIG00005036611) rnf139 (ENSOKIG00005036560) ndufb9 (ENSOKIG00005036533) tmem65 (ENSOKIG00005036508) ENSOKIG00005036267 ENSOKIG00005036244 ENSOKIG00005036229 gabpb2a (ENSOKIG00005036192) MLLT11 (ENSOKIG00005036185) CDC42SE1 (ENSOKIG00005036179) ENSOKIG00005036171 ENSOKIG00005036120 Chinook salmon MODERN SPECIES 4 lgals17 (ENSOTSG00005036443) ENSOTSG00005036440 ENSOTSG00005036439 ENSOTSG00005036437 psmb10 (ENSOTSG00005036432) ENSOTSG00005036421 ENSOTSG00005036420 ENSOTSG00005036415 ENSOTSG00005036413 ATAD2 (ENSOTSG00005036353) ZHX1 (ENSOTSG00005036352) ##9 ZHX2 (ENSOTSG00005036351) #9 COL14A1 (ENSOTSG00005036347) #14 ENPP2 (ENSOTSG00005033098) #18 ENSOTSG00005033040 ENSOTSG00005033039 ##22 CARMIL1 (ENSOTSG00005027806) SCGN (ENSOTSG00005027753) MTSS1 (ENSOTSG00005027687) ndufb9 (ENSOTSG00005027686) tatdn1 (ENSOTSG00005027212) rnf139 (ENSOTSG00005027204) tmem65 (ENSOTSG00005027203) sema6d (ENSOTSG00005027199) tnfaip8l2a (ENSOTSG00005027195) ENSOTSG00005027193 gabpb2a (ENSOTSG00005027189) mllt11 (ENSOTSG00005027186) cdc42se1 (ENSOTSG00005027185) ENSOTSG00005027162 PRUNE1 (ENSOTSG00005027161) Rainbow trout MODERN SPECIES 9 ENSOMYG00000015999 ENSOMYG00000016010 ENSOMYG00000016039 ENSOMYG00000016109 ENSOMYG00000072116 ENSOMYG00000077100 ENSOMYG00000016122 ENSOMYG00000016131 ENSOMYG00000016141 ENSOMYG00000016374 ##9 ENSOMYG00000016377 #9 ENSOMYG00000016450 #14 ENSOMYG00000019025 #18 ENSOMYG00000064426 ENSOMYG00000019775 ENSOMYG00000020675 ##22 ENSOMYG00000021196 ENSOMYG00000056632 ENSOMYG00000069027 MTSS1 (ENSOMYG00000026174) ENSOMYG00000026543 tatdn1 (ENSOMYG00000026649) rnf139 (ENSOMYG00000027051) tmem65 (ENSOMYG00000027059) ENSOMYG00000048249 ENSOMYG00000027218 ENSOMYG00000064831 ENSOMYG00000051188 ENSOMYG00000027401 ENSOMYG00000027420 gabpb2a (ENSOMYG00000027458) Salmo ANCESTRAL SPECIES 40 ENSGT00940000160798.a ENSGT00940000155188.A.g.b ENSGT00940000180480.b ENSGT00940000155565.b.c ENSGT00940000161047.f ENSGT01100000263514.B.`b ENSGT00980000199469.c.a.a ENSGT01100000263531.A.tb.b.c.a ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.d.a ENSGT00550000074694.a.l.a ENSGT00950000182893.a.a.a.a.a.a ##9 ENSGT00950000182893.a.a.a.b.d.c #9 ENSGT00940000153769.F.m.j #14 ENSGT00940000155778.A.x #18 ENSGT00940000156034.b ENSGT00940000155167.b.a.b.u ##22 ENSGT00940000155112.B.b.i ENSGT00950000183108.a.d.l ENSGT00950000183156.a.b.b.b.b.a.c.b.h ENSGT00390000005809.x.a.b ENSGT00940000156272 ENSGT00940000158932.e ENSGT00390000017802.c.e ENSGT00940000163467.a.a.b.b ENSGT00940000158641.a.a.c ENSGT00390000003488.b.a.a.b ENSGT00940000154412.B.a.a.a ENSGT00940000167560.b.a ENSGT00390000009895.e ENSGT00940000160112.f.b.b ENSGT00940000165419.b.a Atlantic salmon MODERN SPECIES 19 ENSSSAG00000078793 CENPA (ENSSSAG00000078816) ENSSSAG00000078819 ENSSSAG00000101238 ENSSSAG00000117066 ENSSSAG00000083542 ENSSSAG00000078859 ENSSSAG00000053956 ##9 ENSSSAG00000078926 #9 ENSSSAG00000087814 ENSSSAG00000078980 #14 ENSSSAG00000095165 ENSSSAG00000079724 #18 ENSSSAG00000115235 ENSSSAG00000079801 ENSSSAG00000080399 ##22 ENSSSAG00000009103 ENSSSAG00000108641 MTSS1 (ENSSSAG00000019850) ndufb9 (ENSSSAG00000038397) tatdn1 (ENSSSAG00000038615) rnf139 (ENSSSAG00000039683) tmem65 (ENSSSAG00000106284) ENSSSAG00000104551 ENSSSAG00000039746 ENSSSAG00000098176 ENSSSAG00000068332 MLLT11 (ENSSSAG00000084331) CDC42SE1 (ENSSSAG00000039965) ENSSSAG00000115878 ENSSSAG00000039984 River trout MODERN SPECIES 27 ENSSTUG00000035743 ENSSTUG00000035754 psmb10 (ENSSTUG00000035804) selenoh (ENSSTUG00000035981) ENSSTUG00000035991 ENSSTUG00000036004 ENSSTUG00000036050 ENSSTUG00000036090 ATAD2 (ENSSTUG00000036114) ZHX1 (ENSSTUG00000036464) ##9 ZHX2 (ENSSTUG00000036466) #9 COL14A1 (ENSSTUG00000036579) #14 ENPP2 (ENSSTUG00000040284) #18 ENSSTUG00000041220 ENSSTUG00000042767 ENSSTUG00000042776 ##22 CARMIL1 (ENSSTUG00000042914) SCGN (ENSSTUG00000044125) MTSS1 (ENSSTUG00000044146) ndufb9 (ENSSTUG00000044373) tatdn1 (ENSSTUG00000044387) rnf139 (ENSSTUG00000044467) tmem65 (ENSSTUG00000044472) ENSSTUG00000044483 sema6d (ENSSTUG00000044501) ENSSTUG00000044556 tnfaip8l2a (ENSSTUG00000044574) ENSSTUG00000044581 ENSSTUG00000044586 gabpb2a (ENSSTUG00000044592) mllt11 (ENSSTUG00000044603) Huchen MODERN SPECIES 1274 ENSHHUG00000040327 ENSHHUG00000040087 ENSHHUG00000040077 ENSHHUG00000040075 ENSHHUG00000040026 ENSHHUG00000039213 ENSHHUG00000039199 ATAD2 (ENSHHUG00000039171) ZHX1 (ENSHHUG00000039169) ##9 ZHX2 (ENSHHUG00000039163) #9 COL14A1 (ENSHHUG00000038483) #14 ENSHHUG00000038481 #15 ENPP2 (ENSHHUG00000038396) #18 ENSHHUG00000038192 ENSHHUG00000038184 ##22 Salmoninae ANCESTRAL SPECIES 93 ENSGT00390000008815.p ENSGT01030000234974.d ENSGT00940000160798.b ENSGT00940000155188.A.g.a ENSGT00940000155565.b.d ENSGT00940000161047.e ENSGT01100000263514.B.ab ENSGT00940000165771 ENSGT01100000263531.A.tb.a.a ENSGT01100000263489.a.a.b.a.a.a.a ENSGT00550000074694.a.l.b ENSGT00950000182893.a.a.a.a.a.b ##9 ENSGT00950000182893.a.a.a.b.d.d #9 ENSGT00940000153769.F.m.i #14 ENSGT00940000155778.A.w #18 ENSGT00940000155167.b.a.b.v ##22 ENSGT00940000155112.B.b.j ENSGT00950000183108.a.d.k ENSGT00950000183156.a.b.b.b.b.a.c.b.g ENSGT00970000195702 ENSGT00940000158932.f ENSGT00390000017802.c.f ENSGT00940000159762.nb.b.a ENSGT00940000159208.A.c ENSGT00940000160076.h ENSGT00940000161022.m ENSGT00390000012691.i.b ENSGT00390000008815.o ENSGT01030000234974.c ENSGT00940000160798.a ENSGT00940000155188.A.g.b Salmoninae_a ANCESTRAL SPECIES 48 ENSGT00940000160798.b ENSGT00940000155188.A.g.a ENSGT00940000155565.b.d ENSGT00940000161047.e ENSGT01100000263514.B.ab ENSGT00940000165771 ENSGT00980000199469.d ENSGT01100000263531.A.tb.a.b ENSGT01100000263531.A.tb.a.a ENSGT01100000263489.a.a.b.a.a.a.a ENSGT00550000074694.a.l.b ENSGT00950000182893.a.a.a.a.a.b ##9 ENSGT00950000182893.a.a.a.b.d.d #9 ENSGT00940000153769.F.m.i #14 ENSGT00940000155778.A.w #18 ENSGT00940000155167.b.a.b.v ##22 ENSGT00940000155112.B.b.j ENSGT00950000183108.a.d.k ENSGT00950000183156.a.b.b.b.b.a.c.b.g ENSGT00390000005809.x.a.a ENSGT00940000158932.f ENSGT00390000017802.c.f ENSGT00940000163467.a.a.b.a ENSGT00940000158641.a.a.d ENSGT00390000003488.b.a.a.a ENSGT00940000154412.B.a.a.b ENSGT00940000167560.b.b ENSGT00390000009895.f ENSGT00940000160112.f.b.a ENSGT00940000165419.b.b ENSGT00450000040262.j.a Salmo ANCESTRAL SPECIES 2 ENSGT00940000155188.A.g.a ENSGT00940000155565.b.d ENSGT00940000161047.e ENSGT01100000263514.B.ab ENSGT00940000165771 ENSGT00980000199469.d ENSGT01100000263531.A.tb.a.b ENSGT00940000177196 ENSGT01100000263531.A.tb.a.a ENSGT01100000263489.a.a.b.a.a.a.a ENSGT00550000074694.a.l.b ENSGT00950000182893.a.a.a.a.a.b ##9 ENSGT00950000182893.a.a.a.b.d.d #9 ENSGT00940000153769.F.m.i #14 ENSGT00940000155778.A.w #18 ENSGT00940000155167.b.a.b.v ##22 ENSGT00940000155112.B.b.j ENSGT00950000183108.a.d.k ENSGT00950000183156.a.b.b.b.b.a.c.b.g ENSGT00970000195702 ENSGT00940000158932.f ENSGT00390000017802.c.f ENSGT00940000163467.a.a.b.a ENSGT00940000158641.a.a.d ENSGT00390000003488.b.a.a.a ENSGT00940000154412.B.a.a.b ENSGT00940000167560.b.b ENSGT00390000009895.f ENSGT00940000160112.f.b.a ENSGT00940000165419.b.b ENSGT00450000040262.j.a River trout MODERN SPECIES 29 lgals17 (ENSSTUG00000031937) ENSSTUG00000031857 ENSSTUG00000031830 ENSSTUG00000031806 psmb10 (ENSSTUG00000031673) selenoh (ENSSTUG00000031646) ENSSTUG00000031631 ENSSTUG00000031487 ENSSTUG00000031457 ENSSTUG00000031442 ATAD2 (ENSSTUG00000031100) ZHX1 (ENSSTUG00000031095) ##9 ZHX2 (ENSSTUG00000031093) #9 COL14A1 (ENSSTUG00000028435) #14 ENPP2 (ENSSTUG00000024922) #18 ENSSTUG00000024824 ##22 CARMIL1 (ENSSTUG00000022698) SCGN (ENSSTUG00000022586) MTSS1 (ENSSTUG00000022309) ENSSTUG00000022177 rnf139 (ENSSTUG00000022156) tmem65 (ENSSTUG00000022145) ENSSTUG00000022138 ENSSTUG00000022134 sema6d (ENSSTUG00000021947) tnfaip8l2a (ENSSTUG00000021930) ENSSTUG00000021925 gabpb2a (ENSSTUG00000021888) mllt11 (ENSSTUG00000021869) CDC42SE1 (ENSSTUG00000021862) ENSSTUG00000021855 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000048981 ENSSSAG00000049458 ENSSSAG00000049471 ENSSSAG00000105235 ENSSSAG00000049490 ENSSSAG00000108615 ENSSSAG00000049592 ENSSSAG00000049725 ENSSSAG00000049737 ENSSSAG00000049801 ENSSSAG00000107672 ENSSSAG00000049929 ##9 ENSSSAG00000053958 #9 ENSSSAG00000054025 #14 ENSSSAG00000057121 #18 ENSSSAG00000062163 ##22 ENSSSAG00000062505 ENSSSAG00000097414 ENSSSAG00000064050 ENSSSAG00000094138 ENSSSAG00000065966 rnf139 (ENSSSAG00000065972) tmem65 (ENSSSAG00000095691) ENSSSAG00000113765 ENSSSAG00000066038 tp8l2 (ENSSSAG00000068313) ENSSSAG00000105109 gabpb2a (ENSSSAG00000039858) mllt11 (ENSSSAG00000092700) CDC42SE1 (ENSSSAG00000068343) ENSSSAG00000090153 Oncorhynchus ANCESTRAL SPECIES 40 ENSGT00940000160798.b ENSGT00940000155188.A.g.a ENSGT00940000155565.b.d ENSGT00940000161047.e ENSGT01100000263514.B.ab ENSGT00940000165771 ENSGT00980000199469.d ENSGT01100000263531.A.tb.a.b ENSGT01100000263531.A.tb.a.a ENSGT01100000263489.a.a.b.a.a.a.a ENSGT00550000074694.a.l.b ENSGT00950000182893.a.a.a.a.a.b ##9 ENSGT00950000182893.a.a.a.b.d.d #9 ENSGT00940000153769.F.m.i #14 ENSGT00940000155778.A.w #18 ENSGT00940000155167.b.a.b.v ##22 ENSGT00940000155112.B.b.j ENSGT00950000183108.a.d.k ENSGT00950000183156.a.b.b.b.b.a.c.b.g ENSGT00390000005809.x.a.a ENSGT00940000158932.f ENSGT00390000017802.c.f ENSGT00940000163467.a.a.b.a ENSGT00940000158641.a.a.d ENSGT00390000003488.b.a.a.a ENSGT00940000154412.B.a.a.b ENSGT00940000167560.b.b ENSGT00390000009895.f ENSGT00940000160112.f.b.a ENSGT00940000165419.b.b ENSGT00450000040262.j.a Oncorhynchus_a ANCESTRAL SPECIES 45 ENSGT00940000160798.b ENSGT00940000155188.A.h ENSGT00940000155565.b.d ENSGT00940000161047.e ENSGT01100000263514.B.ab ENSGT00940000165771 ENSGT00980000199469.d ENSGT01100000263531.A.tb.a.b ENSGT01100000263531.A.tb.a.a ENSGT01100000263489.a.a.b.a.a.a.a ENSGT00550000074694.a.l.b ENSGT00950000182893.a.a.a.a.a.b ##9 ENSGT00950000182893.a.a.a.b.d.d #9 ENSGT00940000153769.F.m.i #14 ENSGT00940000155778.A.w #18 ENSGT00940000155167.b.a.b.v ##22 ENSGT00940000155112.B.b.j ENSGT00950000183108.a.d.k ENSGT00950000183156.a.b.b.b.b.a.c.b.g ENSGT00390000005809.x.a.a ENSGT00940000158932.f ENSGT00390000017802.c.f ENSGT00940000163467.a.a.b.a ENSGT00940000158641.a.a.d ENSGT00390000003488.b.a.a.a ENSGT00940000154412.B.a.a.b ENSGT00940000167560.b.b ENSGT00390000009895.f ENSGT00940000160112.f.b.a ENSGT00940000165419.b.b ENSGT00450000040262.j.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 45 lgals17 (ENSOTSG00005045557) ENSOTSG00005045558 ENSOTSG00005045559 ENSOTSG00005045560 psmb10 (ENSOTSG00005045561) ENSOTSG00005045564 ENSOTSG00005045565 ENSOTSG00005045567 ENSOTSG00005045570 ENSOTSG00005045572 ATAD2 (ENSOTSG00005045573) ZHX1 (ENSOTSG00005045942) ##9 ZHX2 (ENSOTSG00005022773) #9 COL14A1 (ENSOTSG00005022782) #14 ENPP2 (ENSOTSG00005025124) #18 ENSOTSG00005032772 ##22 ENSOTSG00005032777 SCGN (ENSOTSG00005033051) MTSS1 (ENSOTSG00005033053) ndufb9 (ENSOTSG00005033410) rnf139 (ENSOTSG00005033411) tmem65 (ENSOTSG00005033412) ENSOTSG00005033413 six4a (ENSOTSG00005033414) SIX1 (ENSOTSG00005033415) PPM1A (ENSOTSG00005033416) Chinook salmon MODERN SPECIES 24 ENSOTSG00005021150 lgals17 (ENSOTSG00005021142) ENSOTSG00005021139 ENSOTSG00005021135 ENSOTSG00005021133 psmb10 (ENSOTSG00005021055) ENSOTSG00005021049 ENSOTSG00005021046 ENSOTSG00005021041 ENSOTSG00005021034 ATAD2 (ENSOTSG00005018957) ZHX1 (ENSOTSG00005018921) ##9 ZHX2 (ENSOTSG00005018919) #9 COL14A1 (ENSOTSG00005015872) #14 ENPP2 (ENSOTSG00005009895) #18 ENSOTSG00005009889 ##22 ENSOTSG00005007382 SCGN (ENSOTSG00005007369) MTSS1 (ENSOTSG00005007363) ndufb9 (ENSOTSG00005007352) rnf139 (ENSOTSG00005007351) tmem65 (ENSOTSG00005007350) ENSOTSG00005007349 sema6d (ENSOTSG00005007343) tnfaip8l2a (ENSOTSG00005007338) ENSOTSG00005007337 gabpb2a (ENSOTSG00005007336) mllt11 (ENSOTSG00005007335) cdc42se1 (ENSOTSG00005007333) ENSOTSG00005007332 PRUNE1 (ENSOTSG00005007331) Coho salmon MODERN SPECIES 5 ENSOKIG00005024076 ENSOKIG00005024100 psmb10 (ENSOKIG00005024141) selenoh (ENSOKIG00005004237) ENSOKIG00005004245 ENSOKIG00005004255 ENSOKIG00005004279 ENSOKIG00005004329 ENSOKIG00005004373 ENSOKIG00005004385 ATAD2 (ENSOKIG00005004525) ZHX1 (ENSOKIG00005005366) ##9 ZHX2 (ENSOKIG00005005371) #9 COL14A1 (ENSOKIG00005005535) #14 ENPP2 (ENSOKIG00005008895) #18 ENSOKIG00005009722 ##22 CARMIL1 (ENSOKIG00005009783) SCGN (ENSOKIG00005011084) MTSS1 (ENSOKIG00005011225) ENSOKIG00005011318 rnf139 (ENSOKIG00005011395) tmem65 (ENSOKIG00005011405) ENSOKIG00005011410 sema6d (ENSOKIG00005011434) tnfaip8l2a (ENSOKIG00005011616) ENSOKIG00005011641 gabpb2a (ENSOKIG00005011648) mllt11 (ENSOKIG00005011693) CDC42SE1 (ENSOKIG00005011699) ENSOKIG00005011709 PRUNE1 (ENSOKIG00005011716) Rainbow trout MODERN SPECIES 24 ENSOMYG00000023189 ENSOMYG00000023159 ENSOMYG00000075092 ENSOMYG00000023140 ENSOMYG00000065472 ENSOMYG00000070779 ENSOMYG00000023134 ENSOMYG00000016094 ENSOMYG00000022969 ENSOMYG00000022811 ENSOMYG00000022688 ##9 ENSOMYG00000022682 #9 ENSOMYG00000022504 #14 ENSOMYG00000072488 ENSOMYG00000022161 #18 ENSOMYG00000022019 ##22 ENSOMYG00000019796 ENSOMYG00000019506 ENSOMYG00000018856 NDUFB9 (ENSOMYG00000018835) rnf139 (ENSOMYG00000018824) ENSOMYG00000065567 ENSOMYG00000057468 ENSOMYG00000068098 ENSOMYG00000018750 ENSOMYG00000054964 ENSOMYG00000018708 ENSOMYG00000018693 gabpb2a (ENSOMYG00000018662) mllt11 (ENSOMYG00000018637) CDC42SE1 (ENSOMYG00000054395) Huchen MODERN SPECIES 2480 ENSHHUG00000051983 ##22 CARMIL1 (ENSHHUG00000051885) SCGN (ENSHHUG00000051883) MTSS1 (ENSHHUG00000051872) ENSHHUG00000051853 rnf139 (ENSHHUG00000051850) tmem65 (ENSHHUG00000051849) ENSHHUG00000051847 Northern pike MODERN SPECIES 9 ENSELUG00000018710 ENSELUG00000018643 psb7 (ENSELUG00000028849) cenpa (ENSELUG00000034011) ENSELUG00000018499 ENSELUG00000018492 ENSELUG00000001152 ENSELUG00000018403 ENSELUG00000032911 ATAD2 (ENSELUG00000018318) ZHX1 (ENSELUG00000018305) ##9 ZHX2 (ENSELUG00000018297) #9 COL14A1 (ENSELUG00000018261) #14 ENPP2 (ENSELUG00000018089) #18 ENSELUG00000017901 ENSELUG00000017861 ##22 ENSELUG00000017845 SCGN (ENSELUG00000017772) MTSS1 (ENSELUG00000017698) ndufb9 (ENSELUG00000000694) tatdn1 (ENSELUG00000017606) rnf139 (ENSELUG00000017574) tmem65 (ENSELUG00000017556) ENSELUG00000029998 ENSELUG00000000669 ENSELUG00000017420 ENSELUG00000017406 ENSELUG00000026380 ENSELUG00000017438 ENSELUG00000030130 ENSELUG00000026840 Spotted gar MODERN SPECIES 649 zhx2a (ENSLOCG00000018339) #9 has2 (ENSLOCG00000009236) #10 sntb1 (ENSLOCG00000009223) #11 MTBP (ENSLOCG00000009214) #12 mrpl13 (ENSLOCG00000009210) #13 COL14A1 (ENSLOCG00000009194) #14 deptor (ENSLOCG00000009183) #15 dscc1 (ENSLOCG00000009176) #16 taf2 (ENSLOCG00000009156) #17 ENPP2 (ENSLOCG00000009138) #18 ENSLOCG00000009125 CCN3 (ENSLOCG00000009114) #19 mal2 (ENSLOCG00000009108) #20 si:ch211-93i7.4 (ENSLOCG00000009099) #21 TNFRSF11B (ENSLOCG00000009086) #22 ENSLOCG00000009079 ##22 CARMIL1 (ENSLOCG00000009062) scgn (ENSLOCG00000009052) MTSS1 (ENSLOCG00000009035) ndufb9 (ENSLOCG00000009028) tatdn1 (ENSLOCG00000009012) rnf139 (ENSLOCG00000009007) tmem65 (ENSLOCG00000008994) ENSLOCG00000008963 mboat1 (ENSLOCG00000008952) e2f3 (ENSLOCG00000008942) CDKAL1 (ENSLOCG00000008933) sox4b (ENSLOCG00000018338) nrsn1l (ENSLOCG00000008928) DCDC2 (ENSLOCG00000008919) slc6a3 (ENSLOCG00000008899) Reedfish MODERN SPECIES 4 rnmt (ENSECRG00000021384) fam210aa (ENSECRG00000021369) ENSECRG00000021326 ENSECRG00000021300 scgn (ENSECRG00000021285) ripor2 (ENSECRG00000021255) gmnn (ENSECRG00000021235) zgc:111986 (ENSECRG00000021221) acot13 (ENSECRG00000021209) tdp2b (ENSECRG00000021171) aldh5a1 (ENSECRG00000021146) KDM1B (ENSECRG00000021122) DEK (ENSECRG00000021094) si:ch211-93i7.4 (ENSECRG00000021082) #21 TNFRSF11B (ENSECRG00000021019) #22 ENSECRG00000020975 ##22 SAMD12 (ENSECRG00000020950) #23 ext1b (ENSECRG00000020881) #25 med30 (ENSECRG00000020834) #26 SLC30A8 (ENSECRG00000020816) ENSECRG00000020797 ENSECRG00000020776 rad21a (ENSECRG00000020756) #28 utp23 (ENSECRG00000020746) #29 eif3ha (ENSECRG00000020438) #30 trps1 (ENSECRG00000020383) #31 CSMD3 (ENSECRG00000020311) #36 ENSECRG00000020245 MLH1 (ENSECRG00000020228) TRANK1 (ENSECRG00000020183) DCLK3 (ENSECRG00000020156) Sarcopterygii ANCESTRAL SPECIES 96 ENSGT00530000063156.b #8 ENSGT00950000182893.a.a.a.b #9 ENSGT00390000010337.B.a.b #10 ENSGT00950000182863.A.b #11 ENSGT00390000003305 #12 ENSGT00390000001515 #13 ENSGT00940000153769.F #14 ENSGT00520000055667 #15 ENSGT00390000017400 #16 ENSGT00390000000420 #17 ENSGT00940000155778.A #18 ENSGT00940000159963 #19 ENSGT00940000159514 #20 ENSGT00940000159374 #21 ENSGT00940000155167.b.b #22 ENSGT00940000155167.b.a ##22 ENSGT00390000008161.a.b #23 ENSGT00940000155321 #25 ENSGT00390000010887.a #26 ENSGT00940000160706 ENSGT00940000154655.a #28 ENSGT00940000153117.A #29 ENSGT00730000111042 #30 ENSGT00940000157893 #31 ENSGT00940000155549.b #36 ENSGT00940000166312.b.b #34 ENSGT00940000155549.a.b ##36 Coelacanth MODERN SPECIES 2394 TNFRSF11B (ENSLACG00000006043) #22 ENSLACG00000022549 ##22 ENSLACG00000004872 ENSLACG00000004824 Elephant shark MODERN SPECIES 1672 sntb1 (ENSCMIG00000010570) #11 MTBP (ENSCMIG00000010576) #12 mrpl13 (ENSCMIG00000010580) #13 COL14A1 (ENSCMIG00000010673) #14 deptor (ENSCMIG00000010920) #15 dscc1 (ENSCMIG00000010923) #16 taf2 (ENSCMIG00000010987) #17 ENPP2 (ENSCMIG00000011162) #18 CCN3 (ENSCMIG00000011184) #19 MAL2 (ENSCMIG00000011187) #20 si:ch211-93i7.4 (ENSCMIG00000011189) #21 ENSCMIG00000011193 #22 ENSCMIG00000011200 ##22 sqlea (ENSCMIG00000011211) washc5 (ENSCMIG00000011281) Gnathostomata ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Osteoglossocephalai ANCESTRAL SPECIES 67 ENSGT00940000160207.b ENSGT00940000155094.b ENSGT00940000160207.a ENSGT00940000155094.a ENSGT00390000006008 ENSGT00940000158197 ENSGT00950000183149.B ENSGT00940000160694.h ENSGT00530000063106.A ENSGT00940000163473.j ENSGT00940000160694.g.a ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT00700000104550.a.j.b ENSGT00940000158764 ENSGT00950000182863.A.a.b ##11 ENSGT00950000183176.a ENSGT00950000183131.a.f ENSGT00940000157014 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT01050000244866.D.b.a ENSGT00390000006931 Osteoglossiformes ANCESTRAL SPECIES 58 ENSGT00940000159411.b ENSGT00940000160178 ENSGT00530000063693.b ENSGT00940000161086 ENSGT00940000157965.d ENSGT00940000155407 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207.b ENSGT00940000155094.b ENSGT00940000158197 ENSGT00950000183149.B.a ENSGT01030000234597.a.b.b.f.g ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT00700000104550.a.j.b ENSGT00940000158764.f ENSGT00940000165541.d Asian bonytongue MODERN SPECIES 10 tuba1a (ENSSFOG00015028719) jph2 (ENSSFOG00015000150) GDAP1L1 (ENSSFOG00015000236) fitm2 (ENSSFOG00015000270) R3HDML (ENSSFOG00015000276) hnf4a (ENSSFOG00015000282) ttpal (ENSSFOG00015000316) ENSSFOG00015000334 ada (ENSSFOG00015000358) ccn5 (ENSSFOG00015000413) ENSSFOG00015000467 stk35 (ENSSFOG00015026476) pdyn (ENSSFOG00015031763) STMN3 (ENSSFOG00015000551) rtel1 (ENSSFOG00015000577) ENSSFOG00015000734 ##22 zgpat (ENSSFOG00015000739) CHRNA4 (ENSSFOG00015000746) kcnq2a (ENSSFOG00015028801) PREX1 (ENSSFOG00015000864) ENSSFOG00015001026 tox2 (ENSSFOG00015001168) ENSSFOG00015001226 tbc1d25 (ENSSFOG00015028889) ENSSFOG00015001344 nt5dc2 (ENSSFOG00015001364) zgc:162200 (ENSSFOG00015001424) ebf2 (ENSSFOG00015001451) ENSSFOG00015001529 ENSSFOG00015032713 usp39 (ENSSFOG00015001542) Clupeocephala ANCESTRAL SPECIES 346 ENSGT00940000163908 ENSGT00390000000020.a ENSGT00940000158197.d ENSGT00950000183149.B ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT01000000215962 Otomorpha ANCESTRAL SPECIES 92 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000165533.d ENSGT00940000155308.c ENSGT00950000182835.d.a.k.b ENSGT00940000154967.a.a.a ENSGT00940000163310.l ENSGT00940000153185.a.a.b ENSGT01000000215408 ENSGT00940000163908 ENSGT00390000000020.a ENSGT00940000158197.d ENSGT00950000183149.B ENSGT00410000025596.a.a ENSGT00950000182970.A.b ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT00390000006349 ENSGT00940000153544.a.i.b ENSGT00950000183117.a.b.a ENSGT01030000234578.B.b.a ENSGT00950000182931.A.a.b ENSGT00390000012058.c.b ENSGT00940000154171.A ENSGT01030000234528.B.a.a.b.a ENSGT01030000234528.B.a.a.a ENSGT00940000153216.a.b ENSGT00390000009278.b Clupeiformes ANCESTRAL SPECIES 422 ENSGT00940000154967.a.a.a ENSGT00940000153185.a.a.b ENSGT01000000215408 ENSGT00940000163908 ENSGT00390000000020.a ENSGT00940000158197.d ENSGT00950000183149.B ENSGT00410000025596.a.a ENSGT00950000182970.A.b ENSGT00940000155167.a ##22 ENSGT00390000000732 Denticle herring MODERN SPECIES 1 ENSDCDG00000014256 CEPT1 (ENSDCDG00000014329) stk38a (ENSDCDG00000015005) ENSDCDG00000015014 PREX1 (ENSDCDG00000015186) kcnq2a (ENSDCDG00000019092) scube3 (ENSDCDG00000019553) ENSDCDG00000021913 ENSDCDG00000021915 ENSDCDG00000022090 MTCH1 (ENSDCDG00000022093) stk35 (ENSDCDG00000022114) pdyn (ENSDCDG00000022116) GMEB2 (ENSDCDG00000022117) rtel1 (ENSDCDG00000022131) ENSDCDG00000022139 ##22 zgpat (ENSDCDG00000022143) ENSDCDG00000022149 tbc1d25 (ENSDCDG00000022151) R3HDML (ENSDCDG00000022155) hnf4a (ENSDCDG00000022170) ttpal (ENSDCDG00000022287) pkig (ENSDCDG00000022297) zgc:136971 (ENSDCDG00000022306) ada (ENSDCDG00000022311) ENSDCDG00000022314 ENSDCDG00000022316 tbc1d25 (ENSDCDG00000022318) ENSDCDG00000022321 zgc:136971 (ENSDCDG00000022335) ccn5 (ENSDCDG00000022338) Atlantic herring MODERN SPECIES 20 ENSCHAG00000011508 ENSCHAG00000011602 ENSCHAG00000011614 ENSCHAG00000011645 ENSCHAG00000011667 ENSCHAG00000011717 ENSCHAG00000011764 ENSCHAG00000011775 ENSCHAG00000011783 ENSCHAG00000011797 ENSCHAG00000011823 ENSCHAG00000011832 ENSCHAG00000011896 ENSCHAG00000011923 ENSCHAG00000012425 ENSCHAG00000012432 ##22 smc1al (ENSCHAG00000012525) PFKFB1 (ENSCHAG00000016115) ndnl2 (ENSCHAG00000018210) ITIH6 (ENSCHAG00000018239) GDI1 (ENSCHAG00000018356) ENSCHAG00000018525 tafazzin (ENSCHAG00000018782) atp6ap1a (ENSCHAG00000018899) DUSP7 (ENSCHAG00000019003) ENSCHAG00000019015 slc6a1a (ENSCHAG00000019029) VGLL4 (ENSCHAG00000019262) syn2a (ENSCHAG00000019267) ENSCHAG00000019273 raf1a (ENSCHAG00000019289) Euteleosteomorpha ANCESTRAL SPECIES 313 ENSGT00950000183149.B ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT01000000215962 Protacanthopterygii ANCESTRAL SPECIES 87 ENSGT01030000234578.B.b.a ENSGT00390000017353 ENSGT00950000182931.A.a.b ENSGT00950000183117.a.b.a ENSGT00940000153544.a.i.b ENSGT00390000007975.b.b ENSGT00390000000020.a ENSGT00940000158197.d ENSGT00950000183149.B ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f.j ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT00700000104550.a.j.b ENSGT00940000163259.b ENSGT00940000153876.A ENSGT00940000158337 ENSGT00940000154757.xb.a.b ENSGT00940000157064.a.a ENSGT00930000151037 ENSGT00940000160682.a ENSGT00940000159584 ENSGT00940000155056.a ENSGT01030000234558.A.a.a.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000155167.a.a ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155167.a.a ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155167.a.a ##22 Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00390000017353.m ENSGT00940000159081.t ENSGT00950000182931.A.a.b.c ENSGT01030000234578.B.b.a ENSGT00950000183117.a.b.a.e ENSGT00940000153544.a.i.b.c ENSGT00390000007975.b.b ENSGT00390000000020.a.z ENSGT00940000158197.d.a ENSGT00950000183149.B ENSGT00410000025596.a.a.d ENSGT01030000234597.a.b.b.f.j ENSGT00950000182970.A.b ENSGT00940000155167.a.a ##22 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925.c ENSGT00700000104550.a.j.b.c.a ENSGT00940000163259.b.f ENSGT00940000153876.A.e ENSGT00940000158337.e ENSGT00930000151037 ENSGT00940000157064.a.a.d ENSGT00940000160682.a.c ENSGT00940000159584 ENSGT00940000155056.a ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00940000164692.e Coho salmon MODERN SPECIES 8 ENSOKIG00005024603 efhd2 (ENSOKIG00005024592) ENSOKIG00005024589 ENSOKIG00005024572 dennd2da (ENSOKIG00005024542) ENSOKIG00005024519 CEPT1 (ENSOKIG00005023804) stk38a (ENSOKIG00005023719) ENSOKIG00005023384 MTCH1 (ENSOKIG00005023341) stk35 (ENSOKIG00005023326) pdyn (ENSOKIG00005023315) GMEB2 (ENSOKIG00005023304) STMN3 (ENSOKIG00005023286) rtel1 (ENSOKIG00005023147) ENSOKIG00005023103 ##22 chrna4b (ENSOKIG00005023088) kcnq2a (ENSOKIG00005022541) PREX1 (ENSOKIG00005040615) ENSOKIG00005040031 RNF223 (ENSOKIG00005039970) ENSOKIG00005039623 agrn (ENSOKIG00005031562) angptl7 (ENSOKIG00005031143) mtor (ENSOKIG00005030732) ENSOKIG00005030693 ENSOKIG00005030457 BRPF3 (ENSOKIG00005030204) plod1a (ENSOKIG00005023099) mfn2 (ENSOKIG00005021705) ENSOKIG00005020854 Chinook salmon MODERN SPECIES 7 fhad1 (ENSOTSG00005045032) efhd2 (ENSOTSG00005045030) ENSOTSG00005045029 ENSOTSG00005045027 dennd2da (ENSOTSG00005045025) ENSOTSG00005045022 CEPT1 (ENSOTSG00005044833) STK38 (ENSOTSG00005044831) ENSOTSG00005044828 MTCH1 (ENSOTSG00005044798) stk35 (ENSOTSG00005044796) pdyn (ENSOTSG00005044793) GMEB2 (ENSOTSG00005044792) STMN3 (ENSOTSG00005044789) rtel1 (ENSOTSG00005044781) ENSOTSG00005044777 ##22 chrna4b (ENSOTSG00005044774) kcnq2a (ENSOTSG00005044725) PREX1 (ENSOTSG00005044675) ENSOTSG00005044641 RNF223 (ENSOTSG00005044635) ENSOTSG00005044115 agrn (ENSOTSG00005042937) angptl7 (ENSOTSG00005042934) mtor (ENSOTSG00005042924) ENSOTSG00005042918 ENSOTSG00005042912 BRPF3 (ENSOTSG00005042911) plod1a (ENSOTSG00005029411) mfn2 (ENSOTSG00005028934) ENSOTSG00005028014 Salmo ANCESTRAL SPECIES 16 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00390000017353.m ENSGT00940000159081.t ENSGT00950000182931.A.a.b.c ENSGT01030000234578.B.b.a ENSGT00950000183117.a.b.a.e ENSGT00940000153544.a.i.b.c ENSGT00390000007975.b.b ENSGT00390000000020.a.z ENSGT00940000158197.d.a ENSGT00950000183149.B ENSGT00410000025596.a.a.d ENSGT01030000234597.a.b.b.f.j.a ENSGT00950000182970.A.b ENSGT00940000155167.a.a ##22 River trout MODERN SPECIES 20 ENSSTUG00000038364 efhd2 (ENSSTUG00000038400) ENSSTUG00000038411 igf3 (ENSSTUG00000038424) dennd2da (ENSSTUG00000038445) ENSSTUG00000038694 CEPT1 (ENSSTUG00000038721) stk38a (ENSSTUG00000038957) ENSSTUG00000038994 MTCH1 (ENSSTUG00000038996) stk35 (ENSSTUG00000039026) pdyn (ENSSTUG00000039029) GMEB2 (ENSSTUG00000039040) STMN3 (ENSSTUG00000039057) rtel1 (ENSSTUG00000039079) ENSSTUG00000039330 ##22 chrna4b (ENSSTUG00000039342) ENSSTUG00000039356 kcnq2a (ENSSTUG00000039363) PREX1 (ENSSTUG00000039690) ENSSTUG00000040565 RNF223 (ENSSTUG00000041542) ENSSTUG00000041552 ENSSTUG00000041620 agrn (ENSSTUG00000006242) ENSSTUG00000008016 mtor (ENSSTUG00000008045) angptl7 (ENSSTUG00000008611) ENSSTUG00000008620 ENSSTUG00000008624 BRPF3 (ENSSTUG00000008700) Salmoninae ANCESTRAL SPECIES 818 ENSGT00940000155167.a.b ##22 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925.c ENSGT00700000104550.a.j.b.c.a ENSGT00940000163259.b.f ENSGT00940000153876.A.e ENSGT00940000158337.e Huchen MODERN SPECIES 505 efhd2 (ENSHHUG00000010581) renbp (ENSHHUG00000010570) ENSHHUG00000010563 dennd2da (ENSHHUG00000010550) CEPT1 (ENSHHUG00000010344) stk38a (ENSHHUG00000010295) ENSHHUG00000010286 stk35 (ENSHHUG00000010283) GMEB2 (ENSHHUG00000010273) ENSHHUG00000010257 ##22 zgpat (ENSHHUG00000010245) chrna4b (ENSHHUG00000010136) PREX1 (ENSHHUG00000009602) Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00940000161602.g ENSGT00940000161602.h ENSGT00390000017213.B.f ENSGT00510000047137.w ENSGT00940000164692.f ENSGT00390000012265.w ENSGT00940000160682.a.d ENSGT00940000157064.a.a.c ENSGT00940000154757.xb.a.b ENSGT00940000158337.f ENSGT00970000196788.E.b ENSGT00940000153876.A.f ENSGT00940000163259.b.e ENSGT00700000104550.a.j.b.c.b ENSGT00940000159925.d ENSGT00940000155167.a.b ##22 ENSGT00390000000732 ENSGT00410000025596.a.a.c ENSGT00940000158197.d.b ENSGT00390000000020.a.`b ENSGT00940000153544.a.i.b.d ENSGT00950000183117.a.b.a.f ENSGT00950000182931.A.a.b.d ENSGT00940000156186.k ENSGT00940000153792.B.p.b ENSGT00940000153497.A.c ENSGT00940000160546.a ENSGT00940000161806 ENSGT00940000163942.b.f ENSGT00940000158374.c.c ENSGT00990000211000 Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000160408.c.b ENSGT00940000161602.g ENSGT00940000161602.h ENSGT00510000047137.w ENSGT00940000164692.f ENSGT00390000012265.w ENSGT00940000160682.a.d ENSGT00940000157064.a.a.c ENSGT00940000154757.xb.a.b ENSGT00940000158337.f ENSGT00970000196788.E.b ENSGT00940000153876.A.f ENSGT00940000163259.b.e ENSGT00700000104550.a.j.b.c.b ENSGT00940000159925.d ENSGT00940000155167.a.b ##22 ENSGT00390000000732 ENSGT00410000025596.a.a.c ENSGT01010000230211 ENSGT00940000158197.d.b ENSGT00390000000020.a.`b ENSGT00940000153544.a.i.b.d ENSGT00950000183117.a.b.a.f ENSGT00950000182931.A.a.b.d ENSGT00940000156186.k ENSGT00940000153792.B.p.b ENSGT00940000153497.A.c ENSGT00940000160546.a ENSGT00940000161806 ENSGT00940000163942.b.f ENSGT00940000158374.c.c Rainbow trout MODERN SPECIES 7 ENSOMYG00000017524 ENSOMYG00000017187 ENSOMYG00000071907 ENSOMYG00000051548 ENSOMYG00000017116 ENSOMYG00000054776 ENSOMYG00000057899 agrn (ENSOMYG00000008816) ENSOMYG00000024527 ENSOMYG00000024269 ENSOMYG00000065819 ENSOMYG00000024127 ENSOMYG00000024115 ENSOMYG00000070888 ENSOMYG00000023398 ENSOMYG00000022894 ##22 ENSOMYG00000022880 ENSOMYG00000074412 ENSOMYG00000022845 ENSOMYG00000022822 ENSOMYG00000022803 ENSOMYG00000022789 ENSOMYG00000022681 ENSOMYG00000022577 ENSOMYG00000049835 ENSOMYG00000022541 ENSOMYG00000022492 PRKCZ (ENSOMYG00000021199) ENSOMYG00000051147 ENSOMYG00000021013 MORN1 (ENSOMYG00000020985) Oncorhynchus_a ANCESTRAL SPECIES 90 ENSGT00940000160408.c.b ENSGT00940000161602.g ENSGT00940000161602.h ENSGT00510000047137.w ENSGT00940000164692.f ENSGT00390000012265.w ENSGT00940000160682.a.d ENSGT00940000157064.a.a.c ENSGT00940000154757.xb.a.b ENSGT00940000158337.f ENSGT00970000196788.E.b ENSGT00940000153876.A.f ENSGT00940000163259.b.e ENSGT00700000104550.a.j.b.c.b ENSGT00940000159925.d ENSGT00940000155167.a.b ##22 ENSGT00390000000732 ENSGT00410000025596.a.a.c ENSGT01010000230211 ENSGT00940000158197.d.b ENSGT00390000000020.a.`b ENSGT00940000153544.a.i.b.d ENSGT00950000183117.a.b.a.f ENSGT00950000182931.A.a.b.d ENSGT00940000156186.k ENSGT00940000153792.B.p.b ENSGT00940000153497.A.c ENSGT00940000160546.a ENSGT00940000161806 ENSGT00940000163942.b.f ENSGT00940000158374.c.c Coho salmon MODERN SPECIES 16 ENSOKIG00005030117 ENSOKIG00005030138 ANGPTL7 (ENSOKIG00005030156) ENSOKIG00005030180 ENSOKIG00005030235 ENSOKIG00005030247 AGRN (ENSOKIG00005030361) ENSOKIG00005031669 ENSOKIG00005031700 ptpn11b (ENSOKIG00005031735) RNF223 (ENSOKIG00005032053) ENSOKIG00005032070 ENSOKIG00005032098 PREX1 (ENSOKIG00005032272) ENSOKIG00005034215 ENSOKIG00005034225 ##22 zgpat (ENSOKIG00005034231) GMEB2 (ENSOKIG00005034247) ENSOKIG00005034259 STK35 (ENSOKIG00005034302) ENSOKIG00005034311 MTCH1 (ENSOKIG00005034324) ENSOKIG00005034344 STK38 (ENSOKIG00005034352) CEPT1 (ENSOKIG00005034376) DENND2D (ENSOKIG00005034479) ENSOKIG00005034506 SARS1 (ENSOKIG00005034526) prkcz (ENSOKIG00005034681) skia (ENSOKIG00005037393) MORN1 (ENSOKIG00005037462) Chinook salmon MODERN SPECIES 14 CLCN6 (ENSOTSG00005017087) nppa (ENSOTSG00005017084) nppb (ENSOTSG00005017082) ENSOTSG00005017081 nppal (ENSOTSG00005017080) ENSOTSG00005017079 si:dkeyp-104h9.5 (ENSOTSG00005017077) MEGF6 (ENSOTSG00005017006) foxl2l (ENSOTSG00005017005) her9 (ENSOTSG00005017004) ENSOTSG00005017003 KLHL17 (ENSOTSG00005017002) SAMD11 (ENSOTSG00005016961) ENSOTSG00005016958 PREX1 (ENSOTSG00005011547) ENSOTSG00005011534 ##22 zgpat (ENSOTSG00005011533) GMEB2 (ENSOTSG00005011532) stk35 (ENSOTSG00005011531) MTCH1 (ENSOTSG00005011530) stk38a (ENSOTSG00005011529) CEPT1 (ENSOTSG00005011293) dennd2da (ENSOTSG00005011280) ENSOTSG00005011278 sars1 (ENSOTSG00005011277) ENSOTSG00005011276 angptl7 (ENSOTSG00005011274) ENSOTSG00005011273 agrn (ENSOTSG00005004534) ENSOTSG00005004489 ptpn11b (ENSOTSG00005003082) Salmo ANCESTRAL SPECIES 4 ENSGT00940000160408.c.b ENSGT00940000161602.g ENSGT00940000161602.h ENSGT00390000017213.B.f ENSGT00510000047137.w ENSGT00940000164692.f ENSGT00940000160682.a.d ENSGT00940000157064.a.a.c ENSGT00940000154757.xb.a.b ENSGT00940000158337.f ENSGT00970000196788.E.b ENSGT00940000153876.A.f ENSGT00940000163259.b.e ENSGT00700000104550.a.j.b.c.b ENSGT00940000159925.d ENSGT00940000155167.a.b ##22 ENSGT00390000000732 ENSGT01030000234597.a.b.b.f.j.b ENSGT00410000025596.a.a.c ENSGT00940000158197.d.b ENSGT00390000000020.a.`b ENSGT00940000153544.a.i.b.d ENSGT00950000183117.a.b.a.f ENSGT00950000182931.A.a.b.d ENSGT00940000156186.k ENSGT00940000153792.B.p.b ENSGT00940000153497.A.c ENSGT00940000160546.a ENSGT00940000161806 ENSGT00940000163942.b.f ENSGT00940000158374.c.c Atlantic salmon MODERN SPECIES 4 ybx1 (ENSSSAG00000064058) espn (ENSSSAG00000064030) HES2 (ENSSSAG00000064022) HES2 (ENSSSAG00000064013) ENSSSAG00000064002 ENSSSAG00000063998 ENSSSAG00000063975 ENSSSAG00000089573 ENSSSAG00000109136 ENSSSAG00000063953 ENSSSAG00000056679 ENSSSAG00000088091 ENSSSAG00000047530 ENSSSAG00000047517 ENSSSAG00000108443 tnfrsf6b (ENSSSAG00000044783) ##22 zgpat (ENSSSAG00000044761) ENSSSAG00000044643 ENSSSAG00000092771 ENSSSAG00000103561 ENSSSAG00000110447 ENSSSAG00000044169 ENSSSAG00000043978 ENSSSAG00000101675 ENSSSAG00000043899 GULP1 (ENSSSAG00000065647) ENSSSAG00000065653 PRKCZ (ENSSSAG00000065744) ENSSSAG00000112292 ENSSSAG00000106755 morn1 (ENSSSAG00000068715) River trout MODERN SPECIES 23 ENSSTUG00000044412 rer1 (ENSSTUG00000044399) ENSSTUG00000044369 ENSSTUG00000044357 ENSSTUG00000044350 ENSSTUG00000044333 ENSSTUG00000044327 angptl7 (ENSSTUG00000044313) ENSSTUG00000044304 agrn (ENSSTUG00000033288) ENSSTUG00000033051 ENSSTUG00000033049 ptpn11b (ENSSTUG00000032553) RNF223 (ENSSTUG00000032512) PREX1 (ENSSTUG00000031756) ENSSTUG00000031688 ##22 zgpat (ENSSTUG00000031665) GMEB2 (ENSSTUG00000031642) stk35 (ENSSTUG00000031637) MTCH1 (ENSSTUG00000031597) stk38a (ENSSTUG00000031520) CEPT1 (ENSSTUG00000030827) dennd2da (ENSSTUG00000030764) ENSSTUG00000030755 sars1 (ENSSTUG00000030721) prkcz (ENSSTUG00000027538) skia (ENSSTUG00000027472) MORN1 (ENSSTUG00000027418) ENSSTUG00000027401 plch2a (ENSSTUG00000026437) ENSSTUG00000026363 Northern pike MODERN SPECIES 11 igsf21b (ENSELUG00000003111) dhrs3a (ENSELUG00000003120) VPS13D (ENSELUG00000003164) LRRC38 (ENSELUG00000003189) EPHB2 (ENSELUG00000003213) ENSELUG00000003245 dennd2da (ENSELUG00000003334) DRAM2 (ENSELUG00000000110) CEPT1 (ENSELUG00000003384) stk38a (ENSELUG00000003416) MTCH1 (ENSELUG00000003458) stk35 (ENSELUG00000003479) pdyn (ENSELUG00000003484) GMEB2 (ENSELUG00000003497) rtel1 (ENSELUG00000003671) ENSELUG00000003718 ##22 zgpat (ENSELUG00000003733) chrna4b (ENSELUG00000003742) kcnq2a (ENSELUG00000003819) PREX1 (ENSELUG00000004100) ENSELUG00000004270 RNF223 (ENSELUG00000004313) ENSELUG00000004355 agrn (ENSELUG00000004708) ENSELUG00000004804 angptl7 (ENSELUG00000004817) mtor (ENSELUG00000004972) ENSELUG00000005027 ENSELUG00000005040 MAPK13 (ENSELUG00000005103) BRPF3 (ENSELUG00000005391) Sarcopterygii ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Amniota ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Cryptodira ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Testudinidae ANCESTRAL SPECIES 28 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00390000005318.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b.n.b.b.a ENSGT00960000186656.a.b.m ENSGT00950000183149.B ENSGT00940000158197 ENSGT00390000006008 ENSGT00940000160694 ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000155167.a ##22 ENSGT00940000156407 ENSGT00390000000732 ENSGT00940000162832 ENSGT00940000158060 ENSGT00940000162803 ENSGT00940000155572 ENSGT00940000155597 ENSGT00940000166487 ENSGT00960000187367 ENSGT01020000230412.B.b.a ENSGT00940000159165 ENSGT00390000008161.a.a ##23 ENSGT00550000075016 ENSGT00940000162709 ENSGT00940000159974 Goode s thornscrub tortoise MODERN SPECIES 5 SNPH (ENSGEVG00005009288) SDCBP2 (ENSGEVG00005009353) ENSGEVG00005009401 ENSGEVG00005009435 NSFL1C (ENSGEVG00005009482) ENSGEVG00005009556 ENSGEVG00005009810 ENSGEVG00005009931 PDYN (ENSGEVG00005010000) STK35 (ENSGEVG00005010018) FNDC11 (ENSGEVG00005010071) HELZ2 (ENSGEVG00005010088) GMEB2 (ENSGEVG00005010140) STMN3 (ENSGEVG00005010170) RTEL1 (ENSGEVG00005010276) ENSGEVG00005004244 ##22 ARFRP1 (ENSGEVG00005004275) ZGPAT (ENSGEVG00005004299) SLC2A4RG (ENSGEVG00005004321) ZBTB46 (ENSGEVG00005004362) ABHD16B (ENSGEVG00005004392) TPD52L2 (ENSGEVG00005004427) DNAJC5 (ENSGEVG00005004483) ENSGEVG00005004507 ENSGEVG00005004541 UCKL1 (ENSGEVG00005004584) ZNF512B (ENSGEVG00005004703) SAMD10 (ENSGEVG00005005054) ##23 PRPF6 (ENSGEVG00005005088) SOX18 (ENSGEVG00005005139) TCEA2 (ENSGEVG00005005154) Abingdon island giant tortoise MODERN SPECIES 2561 ENSCABG00000017002 ENSCABG00000017004 NSFL1C (ENSCABG00000017007) ENSCABG00000017008 ENSCABG00000017009 ENSCABG00000017010 ENSCABG00000017012 PDYN (ENSCABG00000000179) STK35 (ENSCABG00000000205) FNDC11 (ENSCABG00000000216) ENSCABG00000000258 ENSCABG00000000280 GMEB2 (ENSCABG00000000312) STMN3 (ENSCABG00000000320) RTEL1 (ENSCABG00000000397) ENSCABG00000000656 ##22 ARFRP1 (ENSCABG00000000660) ZGPAT (ENSCABG00000000665) SLC2A4RG (ENSCABG00000000669) ZBTB46 (ENSCABG00000000672) ABHD16B (ENSCABG00000000678) TPD52L2 (ENSCABG00000000682) DNAJC5 (ENSCABG00000000698) ENSCABG00000000707 UCKL1 (ENSCABG00000000806) ZNF512B (ENSCABG00000000832) SAMD10 (ENSCABG00000000842) ##23 PRPF6 (ENSCABG00000000848) SOX18 (ENSCABG00000000851) TCEA2 (ENSCABG00000000852) RGS19 (ENSCABG00000000856) Chinese turtle MODERN SPECIES 1798 ENSPSIG00000010541 ENSPSIG00000000748 ENSPSIG00000010551 ENSPSIG00000010571 NSFL1C (ENSPSIG00000010764) ENSPSIG00000011288 ENSPSIG00000011498 ENSPSIG00000011699 PDYN (ENSPSIG00000012444) STK35 (ENSPSIG00000000756) FNDC11 (ENSPSIG00000000763) HELZ2 (ENSPSIG00000012565) GMEB2 (ENSPSIG00000013495) STMN3 (ENSPSIG00000013818) RTEL1 (ENSPSIG00000014069) ENSPSIG00000014527 ##22 ARFRP1 (ENSPSIG00000014774) ZGPAT (ENSPSIG00000015801) ZBTB46 (ENSPSIG00000015887) ABHD16B (ENSPSIG00000015892) TPD52L2 (ENSPSIG00000015975) DNAJC5 (ENSPSIG00000016474) ENSPSIG00000016478 UCKL1 (ENSPSIG00000016619) ZNF512B (ENSPSIG00000006536) SAMD10 (ENSPSIG00000007648) ##23 PRPF6 (ENSPSIG00000007717) SOX18 (ENSPSIG00000009637) TCEA2 (ENSPSIG00000009776) RGS19 (ENSPSIG00000010046) LKAAEAR1 (ENSPSIG00000010229) Archosauria ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Aves ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Neognathae ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Neognathae_b ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Neognathae_c ANCESTRAL SPECIES 20 ENSGT00390000012257 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00390000005318.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT00390000006008 ENSGT00940000160694 ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000155167.a ##22 ENSGT00940000156407 ENSGT00390000000732 ENSGT00960000189689 ENSGT00940000162832 ENSGT00940000158060 ENSGT00940000155572 ENSGT00940000155597 ENSGT00960000187367 ENSGT01020000230412.B.b.a ENSGT00940000159165 ENSGT00390000008161.a.a ##23 ENSGT00550000075016 ENSGT00950000182844.a.a ENSGT00940000162709 ENSGT00940000159974 Golden eagle MODERN SPECIES 19 ENSACCG00020007146 SNPH (ENSACCG00020007152) SDCBP2 (ENSACCG00020007164) ENSACCG00020007185 ENSACCG00020007212 NSFL1C (ENSACCG00020007238) ENSACCG00020000295 ENSACCG00020000314 PDYN (ENSACCG00020000330) STK35 (ENSACCG00020000353) FNDC11 (ENSACCG00020000373) HELZ2 (ENSACCG00020000546) GMEB2 (ENSACCG00020000613) STMN3 (ENSACCG00020000629) RTEL1 (ENSACCG00020000799) ENSACCG00020000883 ##22 ARFRP1 (ENSACCG00020000906) ZGPAT (ENSACCG00020000942) ENSACCG00020000959 ENSACCG00020000967 SLC2A4RG (ENSACCG00020000978) ZBTB46 (ENSACCG00020001007) TPD52L2 (ENSACCG00020001076) DNAJC5 (ENSACCG00020001118) ENSACCG00020001129 UCKL1 (ENSACCG00020001154) ZNF512B (ENSACCG00020001208) SAMD10 (ENSACCG00020001232) ##23 PRPF6 (ENSACCG00020001251) ENSACCG00020001276 ENSACCG00020001285 Kakapo MODERN SPECIES 5 ENSSHBG00005013230 ENSSHBG00005013206 ENSSHBG00005013186 NSFL1C (ENSSHBG00005013175) ENSSHBG00005013167 ENSSHBG00005013154 ENSSHBG00005013135 PDYN (ENSSHBG00005013127) ENSSHBG00005013119 STK35 (ENSSHBG00005013109) FNDC11 (ENSSHBG00005013096) HELZ2 (ENSSHBG00005013008) GMEB2 (ENSSHBG00005012918) STMN3 (ENSSHBG00005012892) RTEL1 (ENSSHBG00005012821) ENSSHBG00005012783 ##22 ARFRP1 (ENSSHBG00005012759) ZGPAT (ENSSHBG00005012733) SLC2A4RG (ENSSHBG00005012709) ZBTB46 (ENSSHBG00005012676) TPD52L2 (ENSSHBG00005012626) DNAJC5 (ENSSHBG00005012594) ENSSHBG00005012579 UCKL1 (ENSSHBG00005012552) ZNF512B (ENSSHBG00005012519) SAMD10 (ENSSHBG00005012494) ##23 PRPF6 (ENSSHBG00005012448) ENSSHBG00005012426 SOX18 (ENSSHBG00005012412) TCEA2 (ENSSHBG00005012396) RGS19 (ENSSHBG00005012387) Galloanserae ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Anatidae ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Duck MODERN SPECIES 12 CTNNBL1 (ENSAPLG00000002965) ENSAPLG00000006783 PSMF1 (ENSAPLG00000009663) RAD21L1 (ENSAPLG00000009865) ENSAPLG00000022280 SNPH (ENSAPLG00000028758) NSFL1C (ENSAPLG00000011229) ENSAPLG00000001051 ENSAPLG00000019511 ENSAPLG00000022491 STK35 (ENSAPLG00000010202) FNDC11 (ENSAPLG00000010384) HELZ2 (ENSAPLG00000010386) GMEB2 (ENSAPLG00000010816) RTEL1 (ENSAPLG00000011075) ENSAPLG00000014394 ##22 ARFRP1 (ENSAPLG00000014398) ZGPAT (ENSAPLG00000014707) ENSAPLG00000029497 ENSAPLG00000019397 TPD52L2 (ENSAPLG00000014822) DNAJC5 (ENSAPLG00000030676) ENSAPLG00000029064 SALL4 (ENSAPLG00000006498) ZFP64 (ENSAPLG00000006423) TSHZ2 (ENSAPLG00000011554) ENSAPLG00000016541 ZNF217 (ENSAPLG00000006344) BCAS1 (ENSAPLG00000006033) CYP24A1 (ENSAPLG00000005136) PFDN4 (ENSAPLG00000025483) African ostrich MODERN SPECIES 890 PSMF1 (ENSSCUG00000012795) RAD21L1 (ENSSCUG00000012796) ENSSCUG00000012799 ENSSCUG00000012802 NSFL1C (ENSSCUG00000012805) ENSSCUG00000012807 ENSSCUG00000012808 STK35 (ENSSCUG00000012810) FNDC11 (ENSSCUG00000012811) HELZ2 (ENSSCUG00000012814) GMEB2 (ENSSCUG00000012816) STMN3 (ENSSCUG00000012817) RTEL1 (ENSSCUG00000012821) ENSSCUG00000012827 ##22 ARFRP1 (ENSSCUG00000012830) ZGPAT (ENSSCUG00000012833) Lepidosauria ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Episquamata ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Toxicofera ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Elapidae ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000155167.a ##22 Mainland tiger snake MODERN SPECIES 385 RTEL1 (ENSNSUG00000018711) ENSNSUG00000018713 ##22 ARFRP1 (ENSNSUG00000018715) ZGPAT (ENSNSUG00000018716) Cyclostomata ANCESTRAL SPECIES ENSGT00940000155167 #22 Lamprey MODERN SPECIES 369 ENSPMAG00000004092 ENSPMAG00000004073 ENSPMAG00000004070 ENSPMAG00000004059 ENSPMAG00000004053 ENSPMAG00000004045 ENSPMAG00000004025 ENSPMAG00000004020 parn (ENSPMAG00000003956) ENSPMAG00000003954 #22 ENSPMAG00000003945 mpi (ENSPMAG00000003936) trim54 (ENSPMAG00000003911)