Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463 #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Primates	ANCESTRAL SPECIES	3	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k #33	ENSGT00950000182818.D.l ##33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Catarrhini	ANCESTRAL SPECIES	8	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000170309	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00910000147565	ENSGT00940000154966.n	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a ##33	ENSGT00950000182818.D.k.d.b.b.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.l ##33	ENSGT00950000182818.D.k.d.b.b.b ##33	ENSGT00940000163726
Hominoidea	ANCESTRAL SPECIES	13	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000170309	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00510000046986.m.b #23	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.a.a #33	ENSGT00950000182818.D.k.d.b.b.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.l ##33	ENSGT00940000163726
Hominidae	ANCESTRAL SPECIES	16	ENSGT01050000244961.a.b #7	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00510000046986.m.b #23	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.a.a #33	ENSGT00950000182818.D.k.d.b.b.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.l ##33	ENSGT00940000163726
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT01050000244961.a.b #7	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00510000046986.m.b #23	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.a.a #33	ENSGT00950000182818.D.k.d.b.b.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.l ##33	ENSGT00940000158654 #34
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000156686	ENSGT00390000007786.a	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b #7	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00910000147565	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00510000046986.m.b #23	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.a.a #33	ENSGT00950000182818.D.k.d.b.b.a.d ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.k.d.b.b.a.c ##33	ENSGT00940000158654 #34
Pan	ANCESTRAL SPECIES	3	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b #7	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00910000147565	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00510000046986.m.b #23	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.a.a #33	ENSGT00940000158654 #34	ENSGT01020000230346.F.s #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Bonobo	MODERN SPECIES	8	CACNG5 (ENSPPAG00000040213) #7	ENSPPAG00000036544 #8	PRKCA (ENSPPAG00000031670) #9	APOH (ENSPPAG00000040555) #10	ENSPPAG00000043393 #11	ENSPPAG00000039251 #12	CEP112 (ENSPPAG00000043699) #13	AXIN2 (ENSPPAG00000034130) #14	RGS9 (ENSPPAG00000029490) #15	ENSPPAG00000012011 #16	ENSPPAG00000021786 #17	ENSPPAG00000034259 #18	ENSPPAG00000031401 #19	SMURF2 (ENSPPAG00000042884) #20	CEP95 (ENSPPAG00000027687) #21	DDX5 (ENSPPAG00000042005) #22	ENSPPAG00000035454 #23	POLG2 (ENSPPAG00000033268) #24	MILR1 (ENSPPAG00000038263) #25	PECAM1 (ENSPPAG00000017648) #26	TEX2 (ENSPPAG00000043284) #27	ERN1 (ENSPPAG00000031054) #28	ICAM2 (ENSPPAG00000036010) #29	ENSPPAG00000024924 #30	SCN4A (ENSPPAG00000038463) #31	CD79B (ENSPPAG00000040987) #32	GH1 (ENSPPAG00000041456) #33	SMARCD2 (ENSPPAG00000035296) #34	PSMC5 (ENSPPAG00000043609) #35	FTSJ3 (ENSPPAG00000027297) #36	DDX42 (ENSPPAG00000007496) #37
Chimpanzee	MODERN SPECIES	8	CACNG4 (ENSPTRG00000050081)	CACNG5 (ENSPTRG00000009559) #7	ENSPTRG00000045647 #8	PRKCA (ENSPTRG00000009557) #9	APOH (ENSPTRG00000009556) #10	ENSPTRG00000051073 #11	ENSPTRG00000046542 #12	CEP112 (ENSPTRG00000009555) #13	AXIN2 (ENSPTRG00000009554) #14	RGS9 (ENSPTRG00000009552) #15	GNA13 (ENSPTRG00000009551) #16	ENSPTRG00000051444 #17	ENSPTRG00000047785	SMURF2 (ENSPTRG00000009546) #20	CEP95 (ENSPTRG00000009544) #21	DDX5 (ENSPTRG00000009543) #22	ENSPTRG00000043332 #23	POLG2 (ENSPTRG00000009541) #24	MILR1 (ENSPTRG00000009539) #25	PECAM1 (ENSPTRG00000009538) #26	TEX2 (ENSPTRG00000009537) #27	ERN1 (ENSPTRG00000009535) #28	ICAM2 (ENSPTRG00000009534) #29	PRR29 (ENSPTRG00000038752) #30	SCN4A (ENSPTRG00000009532) #31	CD79B (ENSPTRG00000009531) #32	GH1 (ENSPTRG00000034560) ##33	ENSPTRG00000034212	GH2 (ENSPTRG00000034209) ##33	SMARCD2 (ENSPTRG00000009526) #34	PSMC5 (ENSPTRG00000009525) #35
Human	MODERN SPECIES	8	PITPNC1 (ENSG00000154217)	PSMD12 (ENSG00000197170)	HELZ (ENSG00000198265)	CACNG1 (ENSG00000108878)	CACNG4 (ENSG00000075461)	CACNG5 (ENSG00000075429) #7	PRKCA (ENSG00000154229) #9	APOH (ENSG00000091583) #10	CEP112 (ENSG00000154240) #13	AXIN2 (ENSG00000168646) #14	RGS9 (ENSG00000108370) #15	GNA13 (ENSG00000120063) #16	LRRC37A3 (ENSG00000176809)	SMURF2 (ENSG00000108854) #20	CEP95 (ENSG00000258890) #21	DDX5 (ENSG00000108654) #22	POLG2 (ENSG00000256525) #24	MILR1 (ENSG00000271605) #25	PECAM1 (ENSG00000261371) #26	TEX2 (ENSG00000136478) #27	ERN1 (ENSG00000178607) #28	ICAM2 (ENSG00000108622) #29	PRR29 (ENSG00000224383) #30	SCN4A (ENSG00000007314) #31	CD79B (ENSG00000007312) #32	ENSG00000285947	GH1 (ENSG00000259384) #33	CSHL1 (ENSG00000204414) ##33	CSH1 (ENSG00000136488) ##33	GH2 (ENSG00000136487) ##33	CSH2 (ENSG00000213218) ##33
Gorilla	MODERN SPECIES	18	ENSGGOG00000037331 #11	CEP112 (ENSGGOG00000015686) #13	AXIN2 (ENSGGOG00000003974) #14	RGS9 (ENSGGOG00000015530) #15	GNA13 (ENSGGOG00000010062) #16	ENSGGOG00000043982 #17	ENSGGOG00000026387	ENSGGOG00000009759	ENSGGOG00000036797	ENSGGOG00000040775	ENSGGOG00000037313	ENSGGOG00000043840	ENSGGOG00000043150 #19	SMURF2 (ENSGGOG00000007009) #20	CEP95 (ENSGGOG00000015429) #21	DDX5 (ENSGGOG00000015418) #22	POLG2 (ENSGGOG00000015412) #24	MILR1 (ENSGGOG00000044165) #25	PECAM1 (ENSGGOG00000011538) #26	TEX2 (ENSGGOG00000011453) #27	ERN1 (ENSGGOG00000006532) #28	ICAM2 (ENSGGOG00000014108) #29	ENSGGOG00000028409 #30	SCN4A (ENSGGOG00000012527) #31	CD79B (ENSGGOG00000012519) #32	GH2 (ENSGGOG00000040075) ##33	GH-N (ENSGGOG00000014480) ##33	ENSGGOG00000014880 ##33	SMARCD2 (ENSGGOG00000006814) #34	PSMC5 (ENSGGOG00000006803) #35	FTSJ3 (ENSGGOG00000006794) #36
Orangutan	MODERN SPECIES	8	HELZ (ENSPPYG00000008564)	CACNG1 (ENSPPYG00000008563)	CACNG4 (ENSPPYG00000039878)	CACNG5 (ENSPPYG00000008560) #7	ENSPPYG00000008559 #8	PRKCA (ENSPPYG00000008557) #9	APOH (ENSPPYG00000008556) #10	CEP112 (ENSPPYG00000008555) #13	AXIN2 (ENSPPYG00000008554) #14	RGS9 (ENSPPYG00000008553) #15	GNA13 (ENSPPYG00000030702) #16	ENSPPYG00000031676	ENSPPYG00000036066	SMURF2 (ENSPPYG00000008549) #20	CEP95 (ENSPPYG00000008548) #21	DDX5 (ENSPPYG00000008547) #22	POLG2 (ENSPPYG00000008546) #24	MILR1 (ENSPPYG00000008545) #25	PECAM1 (ENSPPYG00000008544) #26	TEX2 (ENSPPYG00000008542) #27	ERN1 (ENSPPYG00000008539) #28	ENSPPYG00000008538 #29	ENSPPYG00000041760 #30	SCN4A (ENSPPYG00000008537) #31	CD79B (ENSPPYG00000008536) #32	GH1 (ENSPPYG00000008535) #33	ENSPPYG00000033578 ##33	ENSPPYG00000040848	SMARCD2 (ENSPPYG00000008534) #34	PSMC5 (ENSPPYG00000008533) #35	FTSJ3 (ENSPPYG00000008532) #36
Gibbon	MODERN SPECIES	9	ADORA2B (ENSNLEG00000014815)	ENSNLEG00000028499	CEP112 (ENSNLEG00000014821) #13	ENSNLEG00000031595	ENSNLEG00000013489	ENSNLEG00000035505 #12	ENSNLEG00000032661 #14	ENSNLEG00000014833	RGS9 (ENSNLEG00000014838) #15	GNA13 (ENSNLEG00000014875) #16	ENSNLEG00000028703	ENSNLEG00000030835	ENSNLEG00000035637	SMURF2 (ENSNLEG00000014881) #20	CEP95 (ENSNLEG00000014905) #21	DDX5 (ENSNLEG00000014929) #22	ENSNLEG00000035786 #23	POLG2 (ENSNLEG00000014951) #24	MILR1 (ENSNLEG00000014968) #25	PECAM1 (ENSNLEG00000014972) #26	TEX2 (ENSNLEG00000015058) #27	ERN1 (ENSNLEG00000015074) #28	ICAM2 (ENSNLEG00000015088) #29	ENSNLEG00000028222 #30	SCN4A (ENSNLEG00000015100) #31	CD79B (ENSNLEG00000015121) #32	GH1 (ENSNLEG00000004073) #33	ENSNLEG00000015134 ##33	GH2 (ENSNLEG00000036173) ##33	MRPL33 (ENSNLEG00000015281)	ENSNLEG00000027938
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00910000147565	ENSGT00940000154966.n	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33	ENSGT00950000182818.D.k.d.b.b.b.a.a ##33
Rhinopithecus	ANCESTRAL SPECIES	60	ENSGT00510000047030.xb.a.c.a	ENSGT00390000006544.a #13	ENSGT00390000006544.b #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00910000147565.d	ENSGT00940000155575.c	ENSGT01050000244891.A.k	ENSGT00940000154966.n	ENSGT00390000005732.u.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.d.a.b ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33	ENSGT00950000182818.D.k.d.b.b.b.a.a ##33
Black snub-nosed monkey	MODERN SPECIES	717											ENSRBIG00000028915	ENSRBIG00000034341	ENSRBIG00000037784	SMURF2 (ENSRBIG00000006448) #20	CEP95 (ENSRBIG00000030288) #21	DDX5 (ENSRBIG00000038867) #22	POLG2 (ENSRBIG00000036171) #24	ENSRBIG00000023938	MILR1 (ENSRBIG00000032573) #25	PECAM1 (ENSRBIG00000038586) #26	TEX2 (ENSRBIG00000040556) #27	ERN1 (ENSRBIG00000033096) #28	ICAM2 (ENSRBIG00000029827) #29	PRR29 (ENSRBIG00000036292) #30	SCN4A (ENSRBIG00000024700) #31	CD79B (ENSRBIG00000034377) #32	ENSRBIG00000043520 ##33	ENSRBIG00000008245 ##33	ENSRBIG00000043875 ##33	ENSRBIG00000044421 ##33	GH2 (ENSRBIG00000040186) ##33
Golden snub-nosed monkey	MODERN SPECIES	2193	ENSRROG00000034608 #11	CEP112 (ENSRROG00000030467) #13	ENSRROG00000031012	ENSRROG00000040739	AXIN2 (ENSRROG00000031000) #14	RGS9 (ENSRROG00000034205) #15	ENSRROG00000042244	GNA13 (ENSRROG00000025979) #16	ENSRROG00000039232 #17	ENSRROG00000036007	ENSRROG00000030320	ENSRROG00000029800	ENSRROG00000043193	SMURF2 (ENSRROG00000014770) #20	CEP95 (ENSRROG00000035634) #21	DDX5 (ENSRROG00000000127) #22	POLG2 (ENSRROG00000028560) #24	MILR1 (ENSRROG00000032207) #25	PECAM1 (ENSRROG00000023263) #26	TEX2 (ENSRROG00000043004) #27	ERN1 (ENSRROG00000017577) #28	ICAM2 (ENSRROG00000037894) #29	PRR29 (ENSRROG00000023151) #30	SCN4A (ENSRROG00000035812) #31	CD79B (ENSRROG00000033239) #32	ENSRROG00000033351 ##33	ENSRROG00000045412 ##33	GH2 (ENSRROG00000032892) ##33	ENSRROG00000027808 ##33	ENSRROG00000032657 ##33	ENSRROG00000042510 ##33
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT01010000222722 #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00390000002376.g.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33	ENSGT00950000182818.D.k.d.b.b.b.a.a ##33	ENSGT00940000163726
Vervet Monkey	MODERN SPECIES	7	PSMD12 (ENSCSAG00000004164)	HELZ (ENSCSAG00000004152)	CACNG1 (ENSCSAG00000004133)	CACNG4 (ENSCSAG00000004131)	CACNG5 (ENSCSAG00000004125) #7	PRKCA (ENSCSAG00000004109) #9	APOH (ENSCSAG00000004104) #10	CEP112 (ENSCSAG00000004099) #13	AXIN2 (ENSCSAG00000004096) #14	RGS9 (ENSCSAG00000004083) #15	GNA13 (ENSCSAG00000004040) #16	ENSCSAG00000004037 #17	ENSCSAG00000019015	SMURF2 (ENSCSAG00000004032) #20	CEP95 (ENSCSAG00000004029) #21	DDX5 (ENSCSAG00000004022) #22	POLG2 (ENSCSAG00000004013) #24	MILR1 (ENSCSAG00000004008) #25	PECAM1 (ENSCSAG00000004001) #26	TEX2 (ENSCSAG00000003996) #27	ERN1 (ENSCSAG00000003990) #28	ICAM2 (ENSCSAG00000003987) #29	PRR29 (ENSCSAG00000003985) #30	SCN4A (ENSCSAG00000003980) #31	CD79B (ENSCSAG00000003963) #32	ENSCSAG00000003961 ##33	ENSCSAG00000003958 ##33	ENSCSAG00000003954 ##33	ENSCSAG00000003948 ##33	ENSCSAG00000003942 ##33	SMARCD2 (ENSCSAG00000003931) #34
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT01010000222722.d #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b #12	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00390000002376.g.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00910000147253	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.c.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT01050000244961.a.b #7	ENSGT01010000222722.d #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00950000183073.b.o.a #11	ENSGT00510000047030.xb.a.c.a	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00390000002376.g.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00910000147253	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.c.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33
Olive baboon	MODERN SPECIES	8	PRKCA (ENSPANG00000020564) #9	APOH (ENSPANG00000020563) #10	CEP112 (ENSPANG00000020608) #13	AXIN2 (ENSPANG00000020613) #14	ENSPANG00000048052	RGS9 (ENSPANG00000020610) #15	ENSPANG00000034645	GNA13 (ENSPANG00000020614) #16	ENSPANG00000032609 #17	ENSPANG00000038295	ENSPANG00000020623	ENSPANG00000017339	SMURF2 (ENSPANG00000033901) #20	ENSPANG00000035326	CEP95 (ENSPANG00000020618) #21	DDX5 (ENSPANG00000020701) #22	POLG2 (ENSPANG00000020707) #24	MILR1 (ENSPANG00000020703) #25	PECAM1 (ENSPANG00000020734) #26	TEX2 (ENSPANG00000020736) #27	ERN1 (ENSPANG00000020738) #28	ICAM2 (ENSPANG00000020740) #29	PRR29 (ENSPANG00000020742) #30	SCN4A (ENSPANG00000020724) #31	CD79B (ENSPANG00000044531) #32	ENSPANG00000020720 ##33	ENSPANG00000031798 ##33	SMARCD2 (ENSPANG00000020977) #34	PSMC5 (ENSPANG00000020980) #35	FTSJ3 (ENSPANG00000020978) #36	DDX42 (ENSPANG00000020990) #37
Cercopithecinae_d	ANCESTRAL SPECIES	122														ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00910000147253	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.c.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33
Sooty mangabey	MODERN SPECIES	163														SMURF2 (ENSCATG00000037035) #20	CEP95 (ENSCATG00000035381) #21	DDX5 (ENSCATG00000040784) #22	POLG2 (ENSCATG00000029013) #24	MILR1 (ENSCATG00000035870) #25	PECAM1 (ENSCATG00000027274) #26	TEX2 (ENSCATG00000039120) #27	ENSCATG00000032847	ERN1 (ENSCATG00000040819) #28	ICAM2 (ENSCATG00000024920) #29	PRR29 (ENSCATG00000039931) #30	SCN4A (ENSCATG00000034229) #31	CD79B (ENSCATG00000040467) #32	ENSCATG00000039856 ##33	ENSCATG00000007350 ##33	ENSCATG00000032539 ##33	SMARCD2 (ENSCATG00000042981) #34	PSMC5 (ENSCATG00000033908) #35
Drill	MODERN SPECIES	1226														SMURF2 (ENSMLEG00000015053) #20	CEP95 (ENSMLEG00000035306) #21	DDX5 (ENSMLEG00000041700) #22	POLG2 (ENSMLEG00000039506) #24	MILR1 (ENSMLEG00000042819) #25	PECAM1 (ENSMLEG00000032770) #26	TEX2 (ENSMLEG00000042917) #27	ENSMLEG00000034536	ERN1 (ENSMLEG00000033739) #28	ICAM2 (ENSMLEG00000036692) #29	PRR29 (ENSMLEG00000035264) #30	SCN4A (ENSMLEG00000039094) #31	CD79B (ENSMLEG00000042425) #32	ENSMLEG00000015292 ##33	ENSMLEG00000034387 ##33	ENSMLEG00000032372 ##33	ENSMLEG00000030063 ##33	ENSMLEG00000034404 ##33
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000007786.a	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b #7	ENSGT01010000222722.d #8	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT00390000002376.g.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00910000147253	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.c.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33
Pig-tailed macaque	MODERN SPECIES	432	ENSMNEG00000044873	ENSMNEG00000033718	ENSMNEG00000042862 #12	CEP112 (ENSMNEG00000030004) #13	AXIN2 (ENSMNEG00000000060) #14	RGS9 (ENSMNEG00000029308) #15	ENSMNEG00000030134	GNA13 (ENSMNEG00000040026) #16	ENSMNEG00000028688 #17	ENSMNEG00000041731	ENSMNEG00000040230	ENSMNEG00000035347	ENSMNEG00000027520	SMURF2 (ENSMNEG00000034193) #20	CEP95 (ENSMNEG00000031411) #21	DDX5 (ENSMNEG00000039559) #22	POLG2 (ENSMNEG00000041525) #24	MILR1 (ENSMNEG00000028270) #25	PECAM1 (ENSMNEG00000037321) #26	ENSMNEG00000039839	TEX2 (ENSMNEG00000004133) #27	ERN1 (ENSMNEG00000044337) #28	PRR29 (ENSMNEG00000014425) #30	ICAM2 (ENSMNEG00000039115) #29	SCN4A (ENSMNEG00000033583) #31	CD79B (ENSMNEG00000019354) #32	ENSMNEG00000043943 ##33	ENSMNEG00000037246 ##33	ENSMNEG00000043398 ##33	ENSMNEG00000037135 ##33
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000156686	ENSGT00390000007786.a	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b #7	ENSGT00940000156104.B #9	ENSGT00940000157228 #10	ENSGT00390000006544 #13	ENSGT00940000157338 #14	ENSGT00940000156505 #15	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054 #16	ENSGT00530000063996.a.f #17	ENSGT01050000244891.A.k.j.b.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00910000147253	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.d.b.b.a.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b.a ##33	ENSGT00950000182818.D.k.c.a ##33	ENSGT00950000182818.D.k.d.b.b.a.b.b ##33	ENSGT00950000182818.D.k.d.b.b.b.b ##33
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000057594	ENSMFAG00000057665	PRKCA (ENSMFAG00000027291) #9	ENSMFAG00000032782 #10	CEP112 (ENSMFAG00000038512) #13	AXIN2 (ENSMFAG00000000055) #14	RGS9 (ENSMFAG00000035462) #15	ENSMFAG00000001356	GNA13 (ENSMFAG00000001747) #16	ENSMFAG00000041682 #17	ENSMFAG00000007530	ENSMFAG00000037747	ENSMFAG00000051834	SMURF2 (ENSMFAG00000045822) #20	CEP95 (ENSMFAG00000037980) #21	DDX5 (ENSMFAG00000026858) #22	POLG2 (ENSMFAG00000002805) #24	MILR1 (ENSMFAG00000037510) #25	PECAM1 (ENSMFAG00000036717) #26	ENSMFAG00000002301	TEX2 (ENSMFAG00000033866) #27	ERN1 (ENSMFAG00000040147) #28	PRR29 (ENSMFAG00000038365) #30	SCN4A (ENSMFAG00000035414) #31	ICAM2 (ENSMFAG00000033733) #29	CD79B (ENSMFAG00000046403) #32	ENSMFAG00000011106 ##33	ENSMFAG00000034224 ##33	ENSMFAG00000052890 ##33	ENSMFAG00000032672 ##33	ENSMFAG00000056288 #34
Rhesus	MODERN SPECIES	7	CACNG4 (ENSMMUG00000060082)	CACNG5 (ENSMMUG00000052025) #7	PRKCA (ENSMMUG00000018378) #9	ENSMMUG00000050517	APOH (ENSMMUG00000015120) #10	CEP112 (ENSMMUG00000005637) #13	ENSMMUG00000051240	AXIN2 (ENSMMUG00000060015) #14	RGS9 (ENSMMUG00000014521) #15	ENSMMUG00000040105	GNA13 (ENSMMUG00000016371) #16	ENSMMUG00000018256	SMURF2 (ENSMMUG00000009461) #20	ENSMMUG00000063689	CEP95 (ENSMMUG00000009459) #21	DDX5 (ENSMMUG00000009463) #22	POLG2 (ENSMMUG00000009464) #24	MILR1 (ENSMMUG00000006317) #25	ENSMMUG00000060875	ENSMMUG00000059400	PECAM1 (ENSMMUG00000011809) #26	TEX2 (ENSMMUG00000017521) #27	ERN1 (ENSMMUG00000015185) #28	ICAM2 (ENSMMUG00000050536) #29	PRR29 (ENSMMUG00000047925) #30	SCN4A (ENSMMUG00000000580) #31	CD79B (ENSMMUG00000041327) #32	ENSMMUG00000000578 ##33	ENSMMUG00000011358 ##33	CSH2 (ENSMMUG00000023707) ##33	CSH3 (ENSMMUG00000057492) ##33
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a	ENSGT01050000244891.A.k.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.b #33	ENSGT00950000182818.D.k.a.b #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004.y #36
Mas night monkey	MODERN SPECIES	507	CACNG5 (ENSANAG00000032702) #7	CACNG4 (ENSANAG00000038342)	CACNG1 (ENSANAG00000037124)	HELZ (ENSANAG00000037949)	PSMD12 (ENSANAG00000024445)	ENSANAG00000021042	NOL11 (ENSANAG00000032675)	BPTF (ENSANAG00000022632)	ENSANAG00000032053	ENSANAG00000019254	ENSANAG00000035825	ENSANAG00000035098	SMURF2 (ENSANAG00000034547) #20	ENSANAG00000030515	CEP95 (ENSANAG00000031572) #21	DDX5 (ENSANAG00000007624) #22	POLG2 (ENSANAG00000034136) #24	MILR1 (ENSANAG00000026436) #25	PECAM1 (ENSANAG00000036807) #26	TEX2 (ENSANAG00000035018) #27	ERN1 (ENSANAG00000019640) #28	PRR29 (ENSANAG00000033797) #30	ICAM2 (ENSANAG00000035089) #29	SCN4A (ENSANAG00000029572) #31	CD79B (ENSANAG00000024983) #32
Cebidae	ANCESTRAL SPECIES	25	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00950000182967.a.a.a.a.b.b.b.l.a	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a.b	ENSGT01050000244891.A.k.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.a.b.b #33	ENSGT00950000182818.D.k.a.b.a #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004.y #36
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00950000183070.a.b.g.b.b.a.b.b	ENSGT00950000182967.a.a.a.a.b.b.b.l.a	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a.b	ENSGT01050000244891.A.k.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.k.b #33	ENSGT00950000182818.D.k.a.b.a #33	ENSGT00950000182818.D.l.b ##33	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004.y #36
Bolivian squirrel monkey	MODERN SPECIES	201											BPTF (ENSSBOG00000030398)	ENSSBOG00000019599	ENSSBOG00000035458	SMURF2 (ENSSBOG00000022418) #20	CEP95 (ENSSBOG00000020512) #21	DDX5 (ENSSBOG00000018926) #22	POLG2 (ENSSBOG00000028048) #24	MILR1 (ENSSBOG00000028365) #25	PECAM1 (ENSSBOG00000025284) #26	TEX2 (ENSSBOG00000034693) #27	ERN1 (ENSSBOG00000035494) #28	ICAM2 (ENSSBOG00000031442) #29	PRR29 (ENSSBOG00000031248) #30	SCN4A (ENSSBOG00000031432) #31	ENSSBOG00000024957 #32	ENSSBOG00000024966 #33	ENSSBOG00000025072 #33	ENSSBOG00000003503 ##33	ENSSBOG00000024210 ##33	ENSSBOG00000032400 #33	ENSSBOG00000032920 #33
Capuchin	MODERN SPECIES	646												ENSCCAG00000026423	ENSCCAG00000019949	SMURF2 (ENSCCAG00000026224) #20	CEP95 (ENSCCAG00000028848) #21	DDX5 (ENSCCAG00000037932) #22	POLG2 (ENSCCAG00000025697) #24	MILR1 (ENSCCAG00000020692) #25	PECAM1 (ENSCCAG00000020075) #26	TEX2 (ENSCCAG00000021956) #27	ERN1 (ENSCCAG00000034845) #28	ICAM2 (ENSCCAG00000029456) #29	PRR29 (ENSCCAG00000022228) #30	SCN4A (ENSCCAG00000030050) #31	ENSCCAG00000020048 #32	ENSCCAG00000024776 #33
Marmoset	MODERN SPECIES	17	ENSCJAG00000008691	ENSCJAG00000008726	NOL11 (ENSCJAG00000008775)	ENSCJAG00000012603	BPTF (ENSCJAG00000031506)	C17orf58 (ENSCJAG00000041812)	ENSCJAG00000075828	ENSCJAG00000073466	ENSCJAG00000081146	ENSCJAG00000065370	ENSCJAG00000083853	ENSCJAG00000045924	ENSCJAG00000084707	SMURF2 (ENSCJAG00000019260) #20	CEP95 (ENSCJAG00000019293) #21	DDX5 (ENSCJAG00000019310) #22	POLG2 (ENSCJAG00000019350) #24	ENSCJAG00000065145	MILR1 (ENSCJAG00000019250) #25	ENSCJAG00000040527	PECAM1 (ENSCJAG00000019367) #26	TEX2 (ENSCJAG00000019377) #27	ERN1 (ENSCJAG00000019415) #28	ICAM2 (ENSCJAG00000019438) #29	PRR29 (ENSCJAG00000019442) #30	SCN4A (ENSCJAG00000019443) #31	CD79B (ENSCJAG00000019471) #32	ENSCJAG00000043217 #33	GH1 (ENSCJAG00000075159) #33	ENSCJAG00000060314	SMARCD2 (ENSCJAG00000019528) #34
Tarsier	MODERN SPECIES	4851																DDX5 (ENSTSYG00000012149) #22	POLG2 (ENSTSYG00000005984) #24	PECAM1 (ENSTSYG00000037510) #26	ENSTSYG00000034311	TEX2 (ENSTSYG00000013538) ##27	ERN1 (ENSTSYG00000029092) #28	ICAM2 (ENSTSYG00000036454) #29	ENSTSYG00000032388
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Mouse lemur	MODERN SPECIES	7	PRKCA (ENSMICG00000013271) #9	CACNG5 (ENSMICG00000013293) #7	CACNG4 (ENSMICG00000034646)	CACNG1 (ENSMICG00000042613)	HELZ (ENSMICG00000013321)	PSMD12 (ENSMICG00000027720)	PITPNC1 (ENSMICG00000012923)	NOL11 (ENSMICG00000017576)	BPTF (ENSMICG00000012004)	ENSMICG00000012046	ENSMICG00000043805	ENSMICG00000011357	ENSMICG00000014521	SMURF2 (ENSMICG00000009294) #20	CEP95 (ENSMICG00000009285) #21	DDX5 (ENSMICG00000009267) #22	POLG2 (ENSMICG00000046718) #24	MILR1 (ENSMICG00000009257) #25	PECAM1 (ENSMICG00000032975) #26	ENSMICG00000036867	TEX2 (ENSMICG00000005725) #27	ERN1 (ENSMICG00000010050) #28	ICAM2 (ENSMICG00000042703) #29	PRR29 (ENSMICG00000028288) #30	SCN4A (ENSMICG00000010028) #31	CD79B (ENSMICG00000031356) #32	ENSMICG00000010016 #33	ENSMICG00000046974	SMARCD2 (ENSMICG00000010005) #34	PSMC5 (ENSMICG00000009989) #35	FTSJ3 (ENSMICG00000045996) #36
Lemuriformes_a	ANCESTRAL SPECIES	97										ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Coquerels sifaka	MODERN SPECIES	120											ENSPCOG00000017861	ENSPCOG00000012747	ENSPCOG00000012798	SMURF2 (ENSPCOG00000016465) #20	ENSPCOG00000024132 #21	DDX5 (ENSPCOG00000023732) #22	POLG2 (ENSPCOG00000024674) #24	MILR1 (ENSPCOG00000014221) #25	PECAM1 (ENSPCOG00000008535) #26	TEX2 (ENSPCOG00000016518) #27	ERN1 (ENSPCOG00000023564) #28	ICAM2 (ENSPCOG00000014373) #29	PRR29 (ENSPCOG00000027180) #30	SCN4A (ENSPCOG00000014635) #31	ENSPCOG00000020550 #32	ENSPCOG00000017753 #33	SMARCD2 (ENSPCOG00000019458) #34	PSMC5 (ENSPCOG00000024095) #35	FTSJ3 (ENSPCOG00000023921) #36	DDX42 (ENSPCOG00000001559) #37	CCDC47 (ENSPCOG00000018115)
Greater bamboo lemur	MODERN SPECIES	677										NOL11 (ENSPSMG00000013432)	BPTF (ENSPSMG00000013295)	ENSPSMG00000013202	KPNA2 (ENSPSMG00000013050)	SMURF2 (ENSPSMG00000012908) #20	CEP95 (ENSPSMG00000012769) #21	DDX5 (ENSPSMG00000012568) #22	POLG2 (ENSPSMG00000012406) #24	MILR1 (ENSPSMG00000012392) #25	PECAM1 (ENSPSMG00000012343) #26	TEX2 (ENSPSMG00000012294) #27	ERN1 (ENSPSMG00000012257) #28	ICAM2 (ENSPSMG00000012223) #29	PRR29 (ENSPSMG00000012203) #30	SCN4A (ENSPSMG00000012187) #31	ENSPSMG00000012166 #32	ENSPSMG00000012159 #33	ENSPSMG00000012153	SMARCD2 (ENSPSMG00000012129) #34	PSMC5 (ENSPSMG00000012043) #35	FTSJ3 (ENSPSMG00000011944) #36	DDX42 (ENSPSMG00000011866) #37
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Tree shrew	MODERN SPECIES	265														SMURF2 (ENSTBEG00000002720) #20	ENSTBEG00000001480 #21	DDX5 (ENSTBEG00000009490) #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Lagomorpha	ANCESTRAL SPECIES	44	ENSGT00940000157338 #14	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT00940000166788	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Rabbit	MODERN SPECIES	10	ENSOCUG00000035777	CEP112 (ENSOCUG00000008454) #13	PRKCA (ENSOCUG00000007362) #9	CACNG5 (ENSOCUG00000031061) #7	CACNG4 (ENSOCUG00000014218)	ENSOCUG00000008850	HELZ (ENSOCUG00000008856)	PSMD12 (ENSOCUG00000013922)	PITPNC1 (ENSOCUG00000015605)	NOL11 (ENSOCUG00000015612)	BPTF (ENSOCUG00000015866)	ENSOCUG00000015913	ENSOCUG00000023204	SMURF2 (ENSOCUG00000012776) #20	CEP95 (ENSOCUG00000012756) #21	DDX5 (ENSOCUG00000026305) #22	POLG2 (ENSOCUG00000032207) #24	ENSOCUG00000007896	PECAM1 (ENSOCUG00000015220) #26	ENSOCUG00000034748	TEX2 (ENSOCUG00000012090) #27	ENSOCUG00000004362	ENSOCUG00000029995	ICAM2 (ENSOCUG00000012856) #29	PRR29 (ENSOCUG00000035912) #30	SCN4A (ENSOCUG00000004347) #31	CD79B (ENSOCUG00000004345) #32	GHB1 (ENSOCUG00000004341) #33	ENSOCUG00000026494	SMARCD2 (ENSOCUG00000004337) #34	ENSOCUG00000004329 #35
Pika	MODERN SPECIES	3727													KPNA2 (ENSOPRG00000018861)	SMURF2 (ENSOPRG00000008250) #20	CEP95 (ENSOPRG00000008223) #21	DDX5 (ENSOPRG00000008204) #22	POLG2 (ENSOPRG00000008195) #24	ENSOPRG00000008177	ENSOPRG00000008171 #26	TEX2 (ENSOPRG00000008151) #27	ERN1 (ENSOPRG00000008129) #28
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Hystricomorpha	ANCESTRAL SPECIES	24	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Naked mole-rat female	MODERN SPECIES	12	CACNG4 (ENSHGLG00000037673)	CACNG1 (ENSHGLG00000000787)	HELZ (ENSHGLG00000000732)	PSMD12 (ENSHGLG00000000655)	PITPNC1 (ENSHGLG00000003137)	NOL11 (ENSHGLG00000003039)	ENSHGLG00000039565	ENSHGLG00000046199	ENSHGLG00000034857	ENSHGLG00000047592	ENSHGLG00000002130	ENSHGLG00000002095	ENSHGLG00000001992 #20	ENSHGLG00000001847 #21	ENSHGLG00000044021 #21	DDX5 (ENSHGLG00000001771) #22	POLG2 (ENSHGLG00000037428) #24	ENSHGLG00000001698 #25	ENSHGLG00000001663 #26	ENSHGLG00000007638	DDX52 (ENSHGLG00000006235)	SYNRG (ENSHGLG00000004431)	ENSHGLG00000047903	DUSP14 (ENSHGLG00000033195)	TADA2A (ENSHGLG00000003972)	ACACA (ENSHGLG00000011781)	ENSHGLG00000038049	AATF (ENSHGLG00000009510)	LHX1 (ENSHGLG00000042105)	MRM1 (ENSHGLG00000008701)	DHRS11 (ENSHGLG00000035143)
Hystricomorpha_a	ANCESTRAL SPECIES	19	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Guinea pig	MODERN SPECIES	65	ENSCPOG00000034880 #13	ENSCPOG00000003931	APOH (ENSCPOG00000012289) #10	ENSCPOG00000033196	PRKCA (ENSCPOG00000014901) #9	CACNG4 (ENSCPOG00000019278)	CACNG1 (ENSCPOG00000030085)	HELZ (ENSCPOG00000014911)	PSMD12 (ENSCPOG00000004023)	PITPNC1 (ENSCPOG00000011412)	NOL11 (ENSCPOG00000011415)	BPTF (ENSCPOG00000004261)	ENSCPOG00000026318	SMURF2 (ENSCPOG00000007168) #20	CEP95 (ENSCPOG00000007148) #21	DDX5 (ENSCPOG00000007133) #22	POLG2 (ENSCPOG00000007124) #24	ENSCPOG00000024719 #25	PECAM1 (ENSCPOG00000012306) #26	TEX2 (ENSCPOG00000003606) #27	ERN1 (ENSCPOG00000000570) #28	ICAM2 (ENSCPOG00000039385) #29	PRR29 (ENSCPOG00000026269) #30	SCN4A (ENSCPOG00000008540) #31	CD79B (ENSCPOG00000008538) #32	GHB1 (ENSCPOG00000022220) #33	SMARCD2 (ENSCPOG00000011371) #34	PSMC5 (ENSCPOG00000011376) #35	FTSJ3 (ENSCPOG00000011384) #36	DDX42 (ENSCPOG00000005633) #37	CCDC47 (ENSCPOG00000005626)
Hystricomorpha_b	ANCESTRAL SPECIES	12	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT00940000166788	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Long-tailed chinchilla	MODERN SPECIES	185	CEP112 (ENSCLAG00000002941) #13	APOH (ENSCLAG00000003838) #10	PRKCA (ENSCLAG00000004100) #9	CACNG5 (ENSCLAG00000004248) #7	CACNG4 (ENSCLAG00000004519)	CACNG1 (ENSCLAG00000004375)	HELZ (ENSCLAG00000004638)	PSMD12 (ENSCLAG00000005477)	PITPNC1 (ENSCLAG00000005836)	NOL11 (ENSCLAG00000002744)	BPTF (ENSCLAG00000003504)	ENSCLAG00000004611	KPNA2 (ENSCLAG00000004650)	SMURF2 (ENSCLAG00000004880) #20	CEP95 (ENSCLAG00000005716) #21	DDX5 (ENSCLAG00000006874) #22	POLG2 (ENSCLAG00000007162) #24	ENSCLAG00000008069	PECAM1 (ENSCLAG00000008503) #26	TEX2 (ENSCLAG00000006475) #27	ERN1 (ENSCLAG00000006912) #28	PRR29 (ENSCLAG00000007391) #30	ICAM2 (ENSCLAG00000007585) #29	SCN4A (ENSCLAG00000007693) #31	CD79B (ENSCLAG00000008401) #32	ENSCLAG00000008456 #33	ENSCLAG00000010989	SMARCD2 (ENSCLAG00000011368) #34	PSMC5 (ENSCLAG00000013231) #35	FTSJ3 (ENSCLAG00000003222) #36	DDX42 (ENSCLAG00000003497) #37
Degu	MODERN SPECIES	56															ENSODEG00000005469	ENSODEG00000006088 #22	HOOK1 (ENSODEG00000006209)	ENSODEG00000019295	ENSODEG00000006014	ENSODEG00000019200	ENSODEG00000005894	ENSODEG00000006131	DOCK4 (ENSODEG00000007577)	ZNF277 (ENSODEG00000006915)	ENSODEG00000006142	IFRD1 (ENSODEG00000005935)	LSMEM1 (ENSODEG00000006808)	SCIN (ENSODEG00000006899)	ENSODEG00000006469	ENSODEG00000006884	ENSODEG00000006445
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004.x #36	ENSGT00940000156559 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F.i #35	ENSGT00550000075004.x #36	ENSGT00940000156559 #37
Marmotini_b	ANCESTRAL SPECIES	38	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F.i #35	ENSGT00550000075004.x #36	ENSGT00940000156559 #37
Squirrel	MODERN SPECIES	141	CEP112 (ENSSTOG00000007220) #13	APOH (ENSSTOG00000026343) #10	PRKCA (ENSSTOG00000003118) #9	CACNG5 (ENSSTOG00000006149) #7	CACNG4 (ENSSTOG00000009282)	CACNG1 (ENSSTOG00000007809)	HELZ (ENSSTOG00000007818)	PSMD12 (ENSSTOG00000003673)	PITPNC1 (ENSSTOG00000003688)	NOL11 (ENSSTOG00000003704)	BPTF (ENSSTOG00000013363)	ENSSTOG00000027925	KPNA2 (ENSSTOG00000026152)	SMURF2 (ENSSTOG00000026041) #20	ENSSTOG00000029590 #21	DDX5 (ENSSTOG00000012526) #22	POLG2 (ENSSTOG00000012523) #24	PECAM1 (ENSSTOG00000021605) #26	TEX2 (ENSSTOG00000028689) #27	ERN1 (ENSSTOG00000009067) #28	ICAM2 (ENSSTOG00000009058) #29	PRR29 (ENSSTOG00000030600) #30	SCN4A (ENSSTOG00000009013) #31	CD79B (ENSSTOG00000009000) #32	ENSSTOG00000008984 #33	ENSSTOG00000026223	SMARCD2 (ENSSTOG00000008962) #34	ENSSTOG00000008945 #35	FTSJ3 (ENSSTOG00000021265) #36	DDX42 (ENSSTOG00000008922) #37	ENSSTOG00000026806
Arctic ground squirrel	MODERN SPECIES	263							HELZ (ENSUPAG00010002790)	PSMD12 (ENSUPAG00010002759)	PITPNC1 (ENSUPAG00010002690)	NOL11 (ENSUPAG00010002348)	BPTF (ENSUPAG00010002285)	ENSUPAG00010002282	KPNA2 (ENSUPAG00010002207)	SMURF2 (ENSUPAG00010002142) #20	CEP95 (ENSUPAG00010001806) #21	DDX5 (ENSUPAG00010001773) #22	POLG2 (ENSUPAG00010001760) #24	ENSUPAG00010001745 #25	PECAM1 (ENSUPAG00010001634) #26	TEX2 (ENSUPAG00010001575) #27	ERN1 (ENSUPAG00010001480) #28	ICAM2 (ENSUPAG00010001458) #29	PRR29 (ENSUPAG00010001383) #30	SCN4A (ENSUPAG00010001330) #31	ENSUPAG00010001310 #32	ENSUPAG00010001297 #32	ENSUPAG00010001279 #33	ENSUPAG00010001267	SMARCD2 (ENSUPAG00010001214) #34	PSMC5 (ENSUPAG00010001149) #35	FTSJ3 (ENSUPAG00010001097) #36
Alpin marmot	MODERN SPECIES	97	CEP112 (ENSMMMG00000011730) #13	APOH (ENSMMMG00000011711) #10	PRKCA (ENSMMMG00000011694) #9	CACNG5 (ENSMMMG00000011683) #7	ENSMMMG00000011678	CACNG1 (ENSMMMG00000011671)	HELZ (ENSMMMG00000011578)	PSMD12 (ENSMMMG00000011521)	PITPNC1 (ENSMMMG00000011507)	NOL11 (ENSMMMG00000011479)	BPTF (ENSMMMG00000011305)	ENSMMMG00000011293	KPNA2 (ENSMMMG00000011261)	SMURF2 (ENSMMMG00000011186) #20	CEP95 (ENSMMMG00000010820) #21	DDX5 (ENSMMMG00000010795) #22	POLG2 (ENSMMMG00000010776) #24	ENSMMMG00000010771 #25	PECAM1 (ENSMMMG00000010408) #26	TEX2 (ENSMMMG00000010383) #27	ERN1 (ENSMMMG00000010321) #28	ICAM2 (ENSMMMG00000010305) #29	SCN4A (ENSMMMG00000010268) #31	CD79B (ENSMMMG00000010255) #32	ENSMMMG00000010241 #33	ENSMMMG00000010214	SMARCD2 (ENSMMMG00000010172) #34	ENSMMMG00000010130 #35	FTSJ3 (ENSMMMG00000010083) #36	DDX42 (ENSMMMG00000010051) #37	ENSMMMG00000010027
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	APOH (ENSSVLG00005012534) #10	PRKCA (ENSSVLG00005012642) #9	CACNG5 (ENSSVLG00005012851) #7	CACNG4 (ENSSVLG00005012913)	CACNG1 (ENSSVLG00005012978)	HELZ (ENSSVLG00005013064)	ENSSVLG00005000100	PSMD12 (ENSSVLG00005000143)	PITPNC1 (ENSSVLG00005000197)	NOL11 (ENSSVLG00005000246)	BPTF (ENSSVLG00005000533)	C17orf58 (ENSSVLG00005000849)	ENSSVLG00005000878	SMURF2 (ENSSVLG00005000925) #20	CEP95 (ENSSVLG00005001017) #21	ENSSVLG00005001086 #22	POLG2 (ENSSVLG00005001136) #24	ENSSVLG00005001166 #25	PECAM1 (ENSSVLG00005001184) #26	TEX2 (ENSSVLG00005001212) #27	ERN1 (ENSSVLG00005001278) #28	ICAM2 (ENSSVLG00005001332) #29	PRR29 (ENSSVLG00005001382) #30	ENSSVLG00005001418 #31	ENSSVLG00005001427	ENSSVLG00005001521 #33	ENSSVLG00005001585	SMARCD2 (ENSSVLG00005001615) #34	PSMC5 (ENSSVLG00005001684) #35	FTSJ3 (ENSSVLG00005001734) #36	DDX42 (ENSSVLG00005001779) #37
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005022140	THAP11 (ENSSVLG00005022120)	ENSSVLG00005022085	EDC4 (ENSSVLG00005021977)	ENSSVLG00005021936	CTRL (ENSSVLG00005021883)	PSMB10 (ENSSVLG00005021819)	SLC12A4 (ENSSVLG00005021064)	DPEP3 (ENSSVLG00005020836)	DPEP2 (ENSSVLG00005020743)	DDX28 (ENSSVLG00005020667)	ENSSVLG00005020635	ENSSVLG00005020601	ENSSVLG00005020570	ENSSVLG00005020439	ENSSVLG00005020394 #22	ENSSVLG00005020353	ENSSVLG00005020325	ENSSVLG00005020295	ENSSVLG00005020220	NFATC3 (ENSSVLG00005019807)	ESRP2 (ENSSVLG00005019333)	PLA2G15 (ENSSVLG00005019151)	SLC7A6 (ENSSVLG00005019070)	SLC7A6OS (ENSSVLG00005019026)	PRMT7 (ENSSVLG00005018893)	SMPD3 (ENSSVLG00005018730)	ZFP90 (ENSSVLG00005018623)	CDH3 (ENSSVLG00005018438)	CDH1 (ENSSVLG00005017684)	TANGO6 (ENSSVLG00005017286)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Kangaroo rat	MODERN SPECIES	326	Cep112 (ENSDORG00000003441) #13	Apoh (ENSDORG00000003443) #10	Prkca (ENSDORG00000010223) #9	Cacng5 (ENSDORG00000005605) #7	Cacng4 (ENSDORG00000010956)	ENSDORG00000027884	ENSDORG00000014256	ENSDORG00000027745	Psmd12 (ENSDORG00000008026)	Pitpnc1 (ENSDORG00000003695)	Bptf (ENSDORG00000010333)	ENSDORG00000027371	ENSDORG00000012160	Smurf2 (ENSDORG00000024550) #20	ENSDORG00000023977 #21	Ddx5 (ENSDORG00000004866) #22	Polg2 (ENSDORG00000001592) #24	ENSDORG00000001590	Pecam1 (ENSDORG00000025909) #26	ENSDORG00000008565	ENSDORG00000028353 #27	ENSDORG00000001504 #28	ENSDORG00000003800 #29	ENSDORG00000025822 #30	ENSDORG00000029941	ENSDORG00000005308	Rab37 (ENSDORG00000005310)	Nherf1 (ENSDORG00000005312)	Nat9 (ENSDORG00000005315)	Tmem104 (ENSDORG00000005316)	Grin2c (ENSDORG00000005317)
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Muroidea	ANCESTRAL SPECIES		ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT01000000216685	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT01000000216685	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT01000000216685	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT01000000216685	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Chinese hamster chok1gshd	MODERN SPECIES	33	Cep112 (ENSCGRG00001000627) #13	Apoh (ENSCGRG00001016274) #10	Prkca (ENSCGRG00001000934) #9	Cacng5 (ENSCGRG00001019493) #7	Cacng4 (ENSCGRG00001025046)	Cacng1 (ENSCGRG00001021421)	Helz (ENSCGRG00001015066)	Psmd12 (ENSCGRG00001008831)	Pitpnc1 (ENSCGRG00001013583)	Nol11 (ENSCGRG00001024010)	Bptf (ENSCGRG00001017221)	1810010H24Rik (ENSCGRG00001005832)	ENSCGRG00001001675	Smurf2 (ENSCGRG00001023581) #20	Cep95 (ENSCGRG00001018047) #21	Ddx5 (ENSCGRG00001014644) #22	Polg2 (ENSCGRG00001013686) #24	Milr1 (ENSCGRG00001021939) #25	Pecam1 (ENSCGRG00001020004) #26	Tex2 (ENSCGRG00001011350) #27	Ern1 (ENSCGRG00001003211) #28	Icam2 (ENSCGRG00001025007) #29	Prr29 (ENSCGRG00001024910) #30	Scn4a (ENSCGRG00001013865) #31	Cd79b (ENSCGRG00001022158) #32	Gh (ENSCGRG00001020762) #33	Tcam1 (ENSCGRG00001017311)	Smarcd2 (ENSCGRG00001021228) #34	Psmc5 (ENSCGRG00001001237) #35	FTSJ3 (ENSCGRG00001018068) #36	Ddx42 (ENSCGRG00001009775) #37
Golden Hamster	MODERN SPECIES	637	ENSMAUG00000001600	Prkca (ENSMAUG00000008808) #9	Cacng5 (ENSMAUG00000006074) #7	Cacng4 (ENSMAUG00000009737)	Cacng1 (ENSMAUG00000001874)	Helz (ENSMAUG00000013803)	Pitpnc1 (ENSMAUG00000014044)	Nol11 (ENSMAUG00000009375)	ENSMAUG00000012134	ENSMAUG00000014781	ENSMAUG00000013301	ENSMAUG00000020721	ENSMAUG00000008315	ENSMAUG00000010800 #20	Cep95 (ENSMAUG00000011495) #21	Ddx5 (ENSMAUG00000008696) #22	Polg2 (ENSMAUG00000008860) #24	ENSMAUG00000014158	Pecam1 (ENSMAUG00000011626) #26	ENSMAUG00000013338	ENSMAUG00000019923 #27	ENSMAUG00000021846 #28	Icam2 (ENSMAUG00000016077) #29	Prr29 (ENSMAUG00000017782) #30	Scn4a (ENSMAUG00000013596) #31	Cd79b (ENSMAUG00000017041) #32	Gh1 (ENSMAUG00000003250) #33	Tcam1 (ENSMAUG00000018249)	Smarcd2 (ENSMAUG00000020853) #34	Psmc5 (ENSMAUG00000012661) #35	Ftsj3 (ENSMAUG00000015688) #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.n	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559.c #37
Northern American deer mouse	MODERN SPECIES	21	Apoh (ENSPEMG00000015156) #10	Prkca (ENSPEMG00000000053) #9	Cacng5 (ENSPEMG00000027675) #7	Cacng4 (ENSPEMG00000024770)	Cacng1 (ENSPEMG00000013430)	ENSPEMG00000029016	Helz (ENSPEMG00000016768)	Psmd12 (ENSPEMG00000010474)	Pitpnc1 (ENSPEMG00000010136)	ENSPEMG00000014781	Bptf (ENSPEMG00000012838)	1810010H24Rik (ENSPEMG00000024552)	ENSPEMG00000018167	Smurf2 (ENSPEMG00000012192) #20	Cep95 (ENSPEMG00000015557) #21	Ddx5 (ENSPEMG00000016502) #22	Polg2 (ENSPEMG00000016654) #24	ENSPEMG00000003917	Pecam1 (ENSPEMG00000006712) #26	ENSPEMG00000018988 #27	Ern1 (ENSPEMG00000002339) #28	Icam2 (ENSPEMG00000004658) #29	Prr29 (ENSPEMG00000011763) #30	Scn4a (ENSPEMG00000013778) #31	Cd79b (ENSPEMG00000001873) #32	Gh (ENSPEMG00000006304) #33	Tcam1 (ENSPEMG00000007448)	Smarcd2 (ENSPEMG00000008268) #34	ENSPEMG00000018373 #35	Ftsj3 (ENSPEMG00000000248) #36	Ddx42 (ENSPEMG00000006755) #37
Prairie vole	MODERN SPECIES	15	Cacng4 (ENSMOCG00000014614)	Cacng1 (ENSMOCG00000022700)	ENSMOCG00000021795	ENSMOCG00000019819	ENSMOCG00000017691	Psmd12 (ENSMOCG00000020324)	Pitpnc1 (ENSMOCG00000016604)	Nol11 (ENSMOCG00000012117)	ENSMOCG00000014143	ENSMOCG00000012024	ENSMOCG00000007201	ENSMOCG00000001219	ENSMOCG00000010455	Smurf2 (ENSMOCG00000007881) #20	Cep95 (ENSMOCG00000001907) #21	Ddx5 (ENSMOCG00000012124) #22	Polg2 (ENSMOCG00000022506) #24	Milr1 (ENSMOCG00000011035) #25	Pecam1 (ENSMOCG00000007681) #26	ENSMOCG00000020002 #27	Ern1 (ENSMOCG00000003999) #28	Icam2 (ENSMOCG00000022483) #29	Prr29 (ENSMOCG00000014006) #30	Scn4a (ENSMOCG00000019442) #31	Cd79b (ENSMOCG00000015364) #32	Gh (ENSMOCG00000013034) #33	ENSMOCG00000003041	Tenm2 (ENSMOCG00000009710)	Wwc1 (ENSMOCG00000019399)	Rars (ENSMOCG00000005240)	Fbll1 (ENSMOCG00000022683)
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Mus	ANCESTRAL SPECIES	2	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Ryukyu mouse	MODERN SPECIES	2	Axin2 (MGP_CAROLIEiJ_G0017344) #14	Cep112 (MGP_CAROLIEiJ_G0017343) #13	Apoh (MGP_CAROLIEiJ_G0017342) #10	Prkca (MGP_CAROLIEiJ_G0017341) #9	Cacng5 (MGP_CAROLIEiJ_G0017340) #7	Cacng4 (MGP_CAROLIEiJ_G0017339)	Cacng1 (MGP_CAROLIEiJ_G0017338)	Helz (MGP_CAROLIEiJ_G0017337)	Psmd12 (MGP_CAROLIEiJ_G0017336)	Pitpnc1 (MGP_CAROLIEiJ_G0017335)	Nol11 (MGP_CAROLIEiJ_G0017334)	Bptf (MGP_CAROLIEiJ_G0017333)	MGP_CAROLIEiJ_G0017332	Smurf2 (MGP_CAROLIEiJ_G0017331) #20	Cep95 (MGP_CAROLIEiJ_G0017330) #21	MGP_CAROLIEiJ_G0017329 #22	Polg2 (MGP_CAROLIEiJ_G0017328) #24	Milr1 (MGP_CAROLIEiJ_G0017327) #25	Pecam1 (MGP_CAROLIEiJ_G0017326) #26	Tex2 (MGP_CAROLIEiJ_G0017325) #27	Ern1 (MGP_CAROLIEiJ_G0017324) #28	Icam2 (MGP_CAROLIEiJ_G0017323) #29	MGP_CAROLIEiJ_G0017322 #30	Scn4a (MGP_CAROLIEiJ_G0017321) #31	Cd79b (MGP_CAROLIEiJ_G0017320) #32	Gh (MGP_CAROLIEiJ_G0017319) #33	Tcam1 (MGP_CAROLIEiJ_G0017318)	Smarcd2 (MGP_CAROLIEiJ_G0017317) #34	Psmc5 (MGP_CAROLIEiJ_G0017316) #35	Ftsj3 (MGP_CAROLIEiJ_G0017315) #36	Ddx42 (MGP_CAROLIEiJ_G0017314) #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a.a.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT01050000244891.A.cb.a.b	ENSGT00960000187096	ENSGT01050000244891.A.cb.a.a.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089.a	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3424	Apoh (ENSMSIG00000022939) #10	Prkca (ENSMSIG00000022965) #9	Cacng5 (ENSMSIG00000023007) #7	ENSMSIG00000023044	Cacng1 (ENSMSIG00000023049)	Helz (ENSMSIG00000023057)	Psmd12 (ENSMSIG00000023153)	Pitpnc1 (ENSMSIG00000023275)	ENSMSIG00000023314	Nol11 (ENSMSIG00000023320)	Bptf (ENSMSIG00000023393)	ENSMSIG00000023800	ENSMSIG00000023823	Smurf2 (ENSMSIG00000023844) #20	Cep95 (ENSMSIG00000023997) #21	ENSMSIG00000024093 #22	Polg2 (ENSMSIG00000024120) #24	Milr1 (ENSMSIG00000024140) #25	Pecam1 (ENSMSIG00000024334) #26	Tex2 (ENSMSIG00000024736) #27	Ern1 (ENSMSIG00000024769) #28	Icam2 (ENSMSIG00000024805) #29	Prr29 (ENSMSIG00000024812) #30	Scn4a (ENSMSIG00000024972) #31	ENSMSIG00000025006	Cd79b (ENSMSIG00000025010) #32	Gh (ENSMSIG00000025028) #33	Tcam1 (ENSMSIG00000025039)	Smarcd2 (ENSMSIG00000025057) #34	Psmc5 (ENSMSIG00000025105) #35	Ftsj3 (ENSMSIG00000025133) #36
Steppe mouse	MODERN SPECIES	26										ENSMSIG00000000072	Gm5431 (ENSMSIG00000000138)	Irgm1 (ENSMSIG00000000152)	Trim7 (ENSMSIG00000000211)	Trim41 (ENSMSIG00000000264)	Rack1 (ENSMSIG00000000343)	ENSMSIG00000000438 #22	ENSMSIG00000000464	ENSMSIG00000000474	Sgcd (ENSMSIG00000000535)	ENSMSIG00000000620	Timd4 (ENSMSIG00000000632)	Havcr1 (ENSMSIG00000000666)	Timd2 (ENSMSIG00000000775)	Dppa1 (ENSMSIG00000000898)	BC053393 (ENSMSIG00000000932)	Gm12169 (ENSMSIG00000000970)
spretus	MODERN SPECIES	2	Axin2 (MGP_SPRETEiJ_G0018188) #14	Cep112 (MGP_SPRETEiJ_G0018187) #13	Apoh (MGP_SPRETEiJ_G0018186) #10	Prkca (MGP_SPRETEiJ_G0018185) #9	Cacng5 (MGP_SPRETEiJ_G0018184) #7	Cacng4 (MGP_SPRETEiJ_G0018183)	Cacng1 (MGP_SPRETEiJ_G0018182)	Helz (MGP_SPRETEiJ_G0018181)	Psmd12 (MGP_SPRETEiJ_G0018180)	Pitpnc1 (MGP_SPRETEiJ_G0018179)	Nol11 (MGP_SPRETEiJ_G0018178)	Bptf (MGP_SPRETEiJ_G0018177)	MGP_SPRETEiJ_G0018176	Smurf2 (MGP_SPRETEiJ_G0018175) #20	Cep95 (MGP_SPRETEiJ_G0018174) #21	Ddx5 (MGP_SPRETEiJ_G0018173) #22	Polg2 (MGP_SPRETEiJ_G0018172) #24	Milr1 (MGP_SPRETEiJ_G0018171) #25	Pecam1 (MGP_SPRETEiJ_G0018170) #26	Tex2 (MGP_SPRETEiJ_G0018169) #27	Ern1 (MGP_SPRETEiJ_G0018168) #28	Icam2 (MGP_SPRETEiJ_G0018167) #29	MGP_SPRETEiJ_G0018166 #30	Cd79b (MGP_SPRETEiJ_G0018164) #32	Gh (MGP_SPRETEiJ_G0018163) #33	Tcam1 (MGP_SPRETEiJ_G0018162)	Smarcd2 (MGP_SPRETEiJ_G0018161) #34	Psmc5 (MGP_SPRETEiJ_G0018160) #35	Ftsj3 (MGP_SPRETEiJ_G0018159) #36	Ddx42 (MGP_SPRETEiJ_G0018158) #37	Ccdc47 (MGP_SPRETEiJ_G0018157)
Mouse	MODERN SPECIES	2	Cep112 (ENSMUSG00000020728) #13	Apoh (ENSMUSG00000000049) #10	Prkca (ENSMUSG00000050965) #9	Cacng5 (ENSMUSG00000040373) #7	Cacng4 (ENSMUSG00000020723)	Cacng1 (ENSMUSG00000020722)	Helz (ENSMUSG00000020721)	Psmd12 (ENSMUSG00000020720)	Pitpnc1 (ENSMUSG00000040430)	Nol11 (ENSMUSG00000018433)	Bptf (ENSMUSG00000040481)	1810010H24Rik (ENSMUSG00000078607)	Kpna2 (ENSMUSG00000018362)	Smurf2 (ENSMUSG00000018363) #20	Cep95 (ENSMUSG00000018372) #21	Ddx5 (ENSMUSG00000020719) #22	Polg2 (ENSMUSG00000020718) #24	Milr1 (ENSMUSG00000040528) #25	Pecam1 (ENSMUSG00000020717) #26	Tex2 (ENSMUSG00000040548) #27	Ern1 (ENSMUSG00000020715) #28	Icam2 (ENSMUSG00000001029) #29	Prr29 (ENSMUSG00000009210) #30	Scn4a (ENSMUSG00000001027) #31	Cd79b (ENSMUSG00000040592) #32	Gh (ENSMUSG00000020713) #33	Tcam1 (ENSMUSG00000020712)	Smarcd2 (ENSMUSG00000078619) #34	Psmc5 (ENSMUSG00000020708) #35	Ftsj3 (ENSMUSG00000020706) #36	Ddx42 (ENSMUSG00000020705) #37
Shrew mouse	MODERN SPECIES	5	Axin2 (MGP_PahariEiJ_G0018474) #14	Cep112 (MGP_PahariEiJ_G0018473) #13	MGP_PahariEiJ_G0018472	Prkca (MGP_PahariEiJ_G0018471) #9	Cacng5 (MGP_PahariEiJ_G0018470) #7	Cacng4 (MGP_PahariEiJ_G0018469)	Cacng1 (MGP_PahariEiJ_G0018468)	Helz (MGP_PahariEiJ_G0018467)	Psmd12 (MGP_PahariEiJ_G0018466)	Pitpnc1 (MGP_PahariEiJ_G0018465)	MGP_PahariEiJ_G0018464	Bptf (MGP_PahariEiJ_G0018463)	MGP_PahariEiJ_G0018462	Smurf2 (MGP_PahariEiJ_G0018461) #20	Cep95 (MGP_PahariEiJ_G0018460) #21	MGP_PahariEiJ_G0018459 #22	Polg2 (MGP_PahariEiJ_G0018458) #24	Milr1 (MGP_PahariEiJ_G0018457) #25	Pecam1 (MGP_PahariEiJ_G0018456) #26	Tex2 (MGP_PahariEiJ_G0018455) #27	Ern1 (MGP_PahariEiJ_G0018454) #28	Icam2 (MGP_PahariEiJ_G0018453) #29	MGP_PahariEiJ_G0018452 #30	Scn4a (MGP_PahariEiJ_G0018451) #31	MGP_PahariEiJ_G0018450 #32	Gh (MGP_PahariEiJ_G0018449) #33	MGP_PahariEiJ_G0018448	Smarcd2 (MGP_PahariEiJ_G0018447) #34	Psmc5 (MGP_PahariEiJ_G0018446) #35	Ftsj3 (MGP_PahariEiJ_G0018445) #36	MGP_PahariEiJ_G0018444 #37
Rat	MODERN SPECIES	1	Prkca (ENSRNOG00000003491) #9	Cacng5 (ENSRNOG00000003288) #7	Cacng4 (ENSRNOG00000003262)	Cacng1 (ENSRNOG00000003245)	Helz (ENSRNOG00000003213)	Psmd12 (ENSRNOG00000003117)	ENSRNOG00000065925	RGD1359290 (ENSRNOG00000027271)	Pitpnc1 (ENSRNOG00000069160)	Nol11 (ENSRNOG00000052934)	Bptf (ENSRNOG00000047296)	C10h17orf58 (ENSRNOG00000043295)	Kpna2 (ENSRNOG00000015329)	Smurf2 (ENSRNOG00000014623) #20	Cep95 (ENSRNOG00000014354) #21	Ddx5 (ENSRNOG00000030680) #22	Polg2 (ENSRNOG00000013728) #24	Milr1 (ENSRNOG00000042524) #25	Pecam1 (ENSRNOG00000066008) #26	Tex2 (ENSRNOG00000013659) #27	Ern1 (ENSRNOG00000012864) #28	Icam2 (ENSRNOG00000025143) #29	Prr29 (ENSRNOG00000060193) #30	Scn4a (ENSRNOG00000012134) #31	Cd79b (ENSRNOG00000011917) #32	Gh1 (ENSRNOG00000011207) #33	Tcam1 (ENSRNOG00000010929)	Smarcd2 (ENSRNOG00000010557) #34	Psmc5 (ENSRNOG00000010038) #35	Ftsj3 (ENSRNOG00000009857) #36	Ddx42 (ENSRNOG00000009474) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1159									ENSNGAG00000016414	ENSNGAG00000021007	ENSNGAG00000019236	ENSNGAG00000019002	ENSNGAG00000013610	Smurf2 (ENSNGAG00000013579) #20	ENSNGAG00000018007 #21	Ddx5 (ENSNGAG00000016241) #22	Polg2 (ENSNGAG00000016032) #24
Lesser Egyptian jerboa	MODERN SPECIES	56	Apoh (ENSJJAG00000018045) #10	Prkca (ENSJJAG00000019799) #9	Cacng5 (ENSJJAG00000008035) #7	Cacng4 (ENSJJAG00000020353)	Cacng1 (ENSJJAG00000019029)	ENSJJAG00000018347	Helz (ENSJJAG00000019941)	Psmd12 (ENSJJAG00000017621)	Pitpnc1 (ENSJJAG00000021296)	Nol11 (ENSJJAG00000019386)	Bptf (ENSJJAG00000022061)	ENSJJAG00000023193	ENSJJAG00000017838	Smurf2 (ENSJJAG00000014730) #20	Cep95 (ENSJJAG00000019343) #21	Ddx5 (ENSJJAG00000017587) #22	Polg2 (ENSJJAG00000018108) #24	ENSJJAG00000017770	Pecam1 (ENSJJAG00000015951) #26	ENSJJAG00000004964	Lyzl6 (ENSJJAG00000011825)	Rprml (ENSJJAG00000005531)	Gosr2 (ENSJJAG00000015324)	Wnt9b (ENSJJAG00000021195)	Wnt3 (ENSJJAG00000019195)	Nsf (ENSJJAG00000016563)	Arf2 (ENSJJAG00000015730)	Crhr1 (ENSJJAG00000015347)	Sppl2c (ENSJJAG00000009854)	ENSJJAG00000018581	Kansl1 (ENSJJAG00000019096)
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000165440	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000165440	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Carnivora	ANCESTRAL SPECIES	9	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Felidae	ANCESTRAL SPECIES	8	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Panthera	ANCESTRAL SPECIES	22	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Panthera_a	ANCESTRAL SPECIES	25	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
leopard	DUPLICATION
leopard	MODERN SPECIES	48	CEP112 (ENSPPRG00000023618) #13	APOH (ENSPPRG00000024507) #10	PRKCA (ENSPPRG00000024564) #9	CACNG5 (ENSPPRG00000024630) #7	CACNG4 (ENSPPRG00000024669)	CACNG1 (ENSPPRG00000024701)	HELZ (ENSPPRG00000024752)	PSMD12 (ENSPPRG00000024964)	PITPNC1 (ENSPPRG00000024992)	NOL11 (ENSPPRG00000025048)	BPTF (ENSPPRG00000020467)	ENSPPRG00000015896	KPNA2 (ENSPPRG00000015610)	SMURF2 (ENSPPRG00000015063) #20	CEP95 (ENSPPRG00000014792) #21	ENSPPRG00000013254 #22	POLG2 (ENSPPRG00000011997) #24	MILR1 (ENSPPRG00000011701) #25	PECAM1 (ENSPPRG00000010594) #26	TEX2 (ENSPPRG00000010004) #27	ERN1 (ENSPPRG00000009424) #28	ICAM2 (ENSPPRG00000008863) #29	PRR29 (ENSPPRG00000007993) #30	SCN4A (ENSPPRG00000007037) #31	ENSPPRG00000006458 #32	ENSPPRG00000006321 #33	ENSPPRG00000004499	SMARCD2 (ENSPPRG00000004137) #34	PSMC5 (ENSPPRG00000003479) #35	FTSJ3 (ENSPPRG00000003042) #36	DDX42 (ENSPPRG00000002740) #37
leopard	MODERN SPECIES	125					ENSPPRG00000019889	TENT5D (ENSPPRG00000012522)	BRWD3 (ENSPPRG00000019725)	ENSPPRG00000012518	SH3BGRL (ENSPPRG00000019552)	ENSPPRG00000019532	ENSPPRG00000019280	POU3F4 (ENSPPRG00000012512)	CYLC1 (ENSPPRG00000019163)	RPS6KA6 (ENSPPRG00000018928)	HDX (ENSPPRG00000018008)	ENSPPRG00000017727 #22
lion	MODERN SPECIES	14	AXIN2 (ENSPLOG00000011171) #14	CEP112 (ENSPLOG00000011280) #13	APOH (ENSPLOG00000011423) #10	PRKCA (ENSPLOG00000011509) #9	CACNG5 (ENSPLOG00000011571) #7	CACNG4 (ENSPLOG00000011621)	CACNG1 (ENSPLOG00000011671)	HELZ (ENSPLOG00000011720)	PSMD12 (ENSPLOG00000011781)	PITPNC1 (ENSPLOG00000011948)	NOL11 (ENSPLOG00000012135)	BPTF (ENSPLOG00000012254)	KPNA2 (ENSPLOG00000012513)	SMURF2 (ENSPLOG00000012578) #20	CEP95 (ENSPLOG00000012686) #21	DDX5 (ENSPLOG00000013079) #22	POLG2 (ENSPLOG00000013290) #24	MILR1 (ENSPLOG00000013307) #25	PECAM1 (ENSPLOG00000013365) #26	TEX2 (ENSPLOG00000013513) #27	ERN1 (ENSPLOG00000013641) #28	ICAM2 (ENSPLOG00000013683) #29	PRR29 (ENSPLOG00000013718) #30	SCN4A (ENSPLOG00000013957) #31	CD79B (ENSPLOG00000014186) #32	ENSPLOG00000014249 #33	ENSPLOG00000014430	SMARCD2 (ENSPLOG00000014534) #34	PSMC5 (ENSPLOG00000014813) #35	FTSJ3 (ENSPLOG00000015048) #36	DDX42 (ENSPLOG00000015251) #37
Tiger	MODERN SPECIES	279			PRKCA (ENSPTIG00000007323) #9	CACNG5 (ENSPTIG00000006955) #7	CACNG4 (ENSPTIG00000006767)	CACNG1 (ENSPTIG00000006602)	HELZ (ENSPTIG00000020571)	PSMD12 (ENSPTIG00000019994)	PITPNC1 (ENSPTIG00000018899)	NOL11 (ENSPTIG00000018044)	BPTF (ENSPTIG00000016453)	ENSPTIG00000016129	KPNA2 (ENSPTIG00000015611)	SMURF2 (ENSPTIG00000014597) #20	CEP95 (ENSPTIG00000013020) #21	DDX5 (ENSPTIG00000010353) #22	POLG2 (ENSPTIG00000009776) #24	MILR1 (ENSPTIG00000008926) #25	PECAM1 (ENSPTIG00000007883) #26	TEX2 (ENSPTIG00000005203) #27	ERN1 (ENSPTIG00000000179) #28	ICAM2 (ENSPTIG00000021615) #29	PRR29 (ENSPTIG00000020906) #30	SCN4A (ENSPTIG00000020022) #31	ENSPTIG00000019704 #32	ENSPTIG00000019005 #33	ENSPTIG00000018553	SMARCD2 (ENSPTIG00000017233) #34	PSMC5 (ENSPTIG00000012907) #35	FTSJ3 (ENSPTIG00000012576) #36	DDX42 (ENSPTIG00000009932) #37
Cat	MODERN SPECIES	245	APOH (ENSFCAG00000012580) #10	PRKCA (ENSFCAG00000012011) #9	CACNG5 (ENSFCAG00000024933) #7	CACNG4 (ENSFCAG00000038541)	CACNG1 (ENSFCAG00000041973)	HELZ (ENSFCAG00000011711)	PSMD12 (ENSFCAG00000027374)	PITPNC1 (ENSFCAG00000002216)	NOL11 (ENSFCAG00000026399)	BPTF (ENSFCAG00000001929)	ENSFCAG00000046125	ENSFCAG00000052269	KPNA2 (ENSFCAG00000001936)	SMURF2 (ENSFCAG00000027599) #20	CEP95 (ENSFCAG00000003513) #21	DDX5 (ENSFCAG00000003512) #22	POLG2 (ENSFCAG00000003511) #24	MILR1 (ENSFCAG00000003510) #25	PECAM1 (ENSFCAG00000003509) #26	TEX2 (ENSFCAG00000003508) #27	ERN1 (ENSFCAG00000003507) #28	ICAM2 (ENSFCAG00000044004) #29	PRR29 (ENSFCAG00000039072) #30	SCN4A (ENSFCAG00000003505) #31	CD79B (ENSFCAG00000040177) #32	GH1 (ENSFCAG00000003503) #33	ENSFCAG00000030355	SMARCD2 (ENSFCAG00000003502) #34	PSMC5 (ENSFCAG00000003501) #35	FTSJ3 (ENSFCAG00000013983) #36	DDX42 (ENSFCAG00000003499) #37
Caniformia	ANCESTRAL SPECIES	6	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Canidae	ANCESTRAL SPECIES	28	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00970000195060	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.v #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Canis_lupus	ANCESTRAL SPECIES	47	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000155528.j	ENSGT00940000160720	ENSGT00390000009760	ENSGT00970000195060	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d.p	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.v #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Dingo	MODERN SPECIES	54	CACNG4 (ENSCAFG00020026089)	CACNG1 (ENSCAFG00020026093)	HELZ (ENSCAFG00020026103)	ENSCAFG00020026142	PSMD12 (ENSCAFG00020026150)	ENSCAFG00020026232	PITPNC1 (ENSCAFG00020026233)	NOL11 (ENSCAFG00020026235)	ENSCAFG00020026236	ENSCAFG00020026238	BPTF (ENSCAFG00020026276)	ENSCAFG00020026544	KPNA2 (ENSCAFG00020026546)	SMURF2 (ENSCAFG00020026551) #20	CEP95 (ENSCAFG00020026560) #21	DDX5 (ENSCAFG00020026563) #22	POLG2 (ENSCAFG00020026568) #24	MILR1 (ENSCAFG00020026569) #25	PECAM1 (ENSCAFG00020026570) #26	TEX2 (ENSCAFG00020026572) #27	ERN1 (ENSCAFG00020026580) #28	ICAM2 (ENSCAFG00020026585) #29	SCN4A (ENSCAFG00020026598) #31	CD79B (ENSCAFG00020026614) #32	ENSCAFG00020026617 #33	ENSCAFG00020026622	ENSCAFG00020026626 #34	PSMC5 (ENSCAFG00020026629) #35	FTSJ3 (ENSCAFG00020026630) #36	DDX42 (ENSCAFG00020026631) #37	CCDC47 (ENSCAFG00020026633)
Dog	MODERN SPECIES	37	CACNG5 (ENSCAFG00845027555) #7	CACNG4 (ENSCAFG00845027500)	CACNG1 (ENSCAFG00845027471)	HELZ (ENSCAFG00845027165)	RPS10 (ENSCAFG00845027106)	PSMD12 (ENSCAFG00845026964)	ENSCAFG00845026899	PITPNC1 (ENSCAFG00845026775)	NOL11 (ENSCAFG00845026677)	ENSCAFG00845026652	BPTF (ENSCAFG00845024868)	ENSCAFG00845024432	KPNA2 (ENSCAFG00845024319)	SMURF2 (ENSCAFG00845023989) #20	CEP95 (ENSCAFG00845023677) #21	DDX5 (ENSCAFG00845023472) #22	POLG2 (ENSCAFG00845023250) #24	MILR1 (ENSCAFG00845023160) #25	PECAM1 (ENSCAFG00845022888) #26	TEX2 (ENSCAFG00845022666) #27	ERN1 (ENSCAFG00845022274) #28	ENSCAFG00845022123 #29	ENSCAFG00845021965 #30	SCN4A (ENSCAFG00845021583) #31	CD79B (ENSCAFG00845021479) #32	GH1 (ENSCAFG00845021230) #33	ENSCAFG00845021151	SMARCD2 (ENSCAFG00845020972) #34	PSMC5 (ENSCAFG00845020751) #35	FTSJ3 (ENSCAFG00845020647) #36	DDX42 (ENSCAFG00845020491) #37
Red fox	MODERN SPECIES	31	PRKCA (ENSVVUG00000006729) #9	CACNG5 (ENSVVUG00000006720) #7	CACNG4 (ENSVVUG00000006712)	CACNG1 (ENSVVUG00000006685)	HELZ (ENSVVUG00000006563)	PSMD12 (ENSVVUG00000006512)	PITPNC1 (ENSVVUG00000006484)	NOL11 (ENSVVUG00000006471)	ENSVVUG00000006465	BPTF (ENSVVUG00000006352)	CUNH17orf58 (ENSVVUG00000006320)	ENSVVUG00000006316	ENSVVUG00000006306	SMURF2 (ENSVVUG00000006289) #20	CEP95 (ENSVVUG00000006275) #21	DDX5 (ENSVVUG00000006263) #22	POLG2 (ENSVVUG00000006258) #24	ENSVVUG00000006251 #25	PECAM1 (ENSVVUG00000006243) #26	TEX2 (ENSVVUG00000006237) #27	ENSVVUG00000006227	ERN1 (ENSVVUG00000006214) #28	ENSVVUG00000006208 #29	PRR29 (ENSVVUG00000006201) #30	SCN4A (ENSVVUG00000006165) #31	CD79B (ENSVVUG00000006154) #32	ENSVVUG00000006149 #33	ENSVVUG00000006142	ENSVVUG00000006131 #34	PSMC5 (ENSVVUG00000006117) #35	FTSJ3 (ENSVVUG00000006106) #36
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Ursidae	DUPLICATION
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154705.A.i.a #22
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	1538																ENSAMEG00000030346 #22
Giant Panda	MODERN SPECIES	1957																ENSAMEG00000027038 #22
Ursidae	ANCESTRAL SPECIES	19	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.j	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A.i.b #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Ursus	ANCESTRAL SPECIES	2	ENSGT00940000157338 #14	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.j	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A.i.b #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37	ENSGT00390000013997
American black bear	MODERN SPECIES	7024															ENSUAMG00000023390 #21	DDX5 (ENSUAMG00000023388) #22	POLG2 (ENSUAMG00000023386) #24
Polar bear	MODERN SPECIES	185	AXIN2 (ENSUMAG00000021279) #14	CEP112 (ENSUMAG00000021120) #13	APOH (ENSUMAG00000021099) #10	PRKCA (ENSUMAG00000019423) #9	CACNG4 (ENSUMAG00000019143)	CACNG1 (ENSUMAG00000019136)	HELZ (ENSUMAG00000018753)	PSMD12 (ENSUMAG00000018722)	PITPNC1 (ENSUMAG00000018719)	NOL11 (ENSUMAG00000018710)	BPTF (ENSUMAG00000018039)	ENSUMAG00000017884	KPNA2 (ENSUMAG00000017864)	SMURF2 (ENSUMAG00000017838) #20	CEP95 (ENSUMAG00000017802) #21	DDX5 (ENSUMAG00000017787) #22	POLG2 (ENSUMAG00000017776) #24	MILR1 (ENSUMAG00000017763) #25	PECAM1 (ENSUMAG00000017729) #26	TEX2 (ENSUMAG00000017710) #27	ERN1 (ENSUMAG00000017551) #28	ENSUMAG00000017521 #29	ENSUMAG00000017519	SCN4A (ENSUMAG00000017504) #31	CD79B (ENSUMAG00000017499) #32	ENSUMAG00000017494 #33	ENSUMAG00000017491	SMARCD2 (ENSUMAG00000017465) #34	PSMC5 (ENSUMAG00000017456) #35	FTSJ3 (ENSUMAG00000017450) #36	DDX42 (ENSUMAG00000017438) #37
Giant Panda	MODERN SPECIES	4	CEP112 (ENSAMEG00000011862) #13	APOH (ENSAMEG00000011842) #10	PRKCA (ENSAMEG00000011747) #9	CACNG5 (ENSAMEG00000011741) #7	CACNG4 (ENSAMEG00000018394)	CACNG1 (ENSAMEG00000018395)	HELZ (ENSAMEG00000018396)	PSMD12 (ENSAMEG00000018399)	PITPNC1 (ENSAMEG00000018401)	NOL11 (ENSAMEG00000018406)	BPTF (ENSAMEG00000018402)	ENSAMEG00000018410	ENSAMEG00000018411	ENSAMEG00000002563 #20	CEP95 (ENSAMEG00000002636) #21	DDX5 (ENSAMEG00000002685) #22	POLG2 (ENSAMEG00000002728) #24	ENSAMEG00000031061	ENSAMEG00000002754 #25	PECAM1 (ENSAMEG00000002763) #26	TEX2 (ENSAMEG00000002814) #27	ERN1 (ENSAMEG00000002855) #28	ENSAMEG00000002892 #29	PRR29 (ENSAMEG00000002902) #30	SCN4A (ENSAMEG00000002909) #31	CD79B (ENSAMEG00000003033) #32	GH1 (ENSAMEG00000003038) #33	ENSAMEG00000003052	SMARCD2 (ENSAMEG00000003062) #34	PSMC5 (ENSAMEG00000003120) #35	FTSJ3 (ENSAMEG00000003148) #36
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154705.A.j #22
Giant Panda	MODERN SPECIES	2004																ENSAMEG00000030180 #22
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT00690000102286.b.hb.a	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
American mink	MODERN SPECIES	422							ENSNVIG00000000071	PSMD12 (ENSNVIG00000000100)	ENSNVIG00000000131	NOL11 (ENSNVIG00000000139)	BPTF (ENSNVIG00000000233)	ENSNVIG00000003849	ENSNVIG00000003862	SMURF2 (ENSNVIG00000003869) #20	CEP95 (ENSNVIG00000003929) #21	DDX5 (ENSNVIG00000003999) #22	POLG2 (ENSNVIG00000004100) #24	MILR1 (ENSNVIG00000004144) #25	ENSNVIG00000004235
Ferret	DUPLICATION
Ferret	DUPLICATION
Ferret	MODERN SPECIES	68																ENSMPUG00000003092 #22
Ferret	MODERN SPECIES	166	TMEM200A (ENSMPUG00000018855)	SAMD3 (ENSMPUG00000014643)	L3MBTL3 (ENSMPUG00000014637)	ENSMPUG00000014635	ARHGAP18 (ENSMPUG00000014631)	LAMA2 (ENSMPUG00000014620)	PTPRK (ENSMPUG00000014617)	THEMIS (ENSMPUG00000014616)	C6orf58 (ENSMPUG00000014613)	KIAA0408 (ENSMPUG00000014612)	ENSMPUG00000014606	RNF146 (ENSMPUG00000018852)	RSPO3 (ENSMPUG00000014604)	ENSMPUG00000014602	CENPW (ENSMPUG00000014600)	ENSMPUG00000014596 #22	ENSMPUG00000018849	TRMT11 (ENSMPUG00000014547)	HINT3 (ENSMPUG00000014539)	NCOA7 (ENSMPUG00000014535)	ENSMPUG00000014531	HDDC2 (ENSMPUG00000014527)	TPD52L1 (ENSMPUG00000014507)	ENSMPUG00000014500	NKAIN2 (ENSMPUG00000014499)	ENSMPUG00000014496	ENSMPUG00000014490	TRDN (ENSMPUG00000014482)	CLVS2 (ENSMPUG00000014480)	SMPDL3A (ENSMPUG00000014477)	FABP7 (ENSMPUG00000014466)
Ferret	MODERN SPECIES	250	COPB2 (ENSMPUG00000009098)	MRPS22 (ENSMPUG00000009114)	ENSMPUG00000018661	PIK3CB (ENSMPUG00000009122)	FAIM (ENSMPUG00000009142)	CEP70 (ENSMPUG00000009149)	ESYT3 (ENSMPUG00000009161)	MRAS (ENSMPUG00000009182)	NME9 (ENSMPUG00000009189)	ARMC8 (ENSMPUG00000009208)	DBR1 (ENSMPUG00000009230)	A4GNT (ENSMPUG00000009238)	DZIP1L (ENSMPUG00000009244)	CLDN18 (ENSMPUG00000009256)	SOX14 (ENSMPUG00000018663)	ENSMPUG00000009262 #22	ENSMPUG00000009268	IL20RB (ENSMPUG00000009312)	NCK1 (ENSMPUG00000009318)	SLC35G2 (ENSMPUG00000018667)	STAG1 (ENSMPUG00000009337)	PCCB (ENSMPUG00000009355)	MSL2 (ENSMPUG00000009366)	ENSMPUG00000009371	EPHB1 (ENSMPUG00000009374)	KY (ENSMPUG00000009381)	CEP63 (ENSMPUG00000009393)	ENSMPUG00000009401	AMOTL2 (ENSMPUG00000009452)	RYK (ENSMPUG00000009460)	SLCO2A1 (ENSMPUG00000009474)
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT01050000244891.A.i	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Equus	ANCESTRAL SPECIES		ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.e.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37	ENSGT00390000013997
Donkey	MODERN SPECIES	4	PRKCA (ENSEASG00005015912) #9	CACNG5 (ENSEASG00005015910) #7	CACNG4 (ENSEASG00005026367)	ENSEASG00005035252	CACNG1 (ENSEASG00005038509)	HELZ (ENSEASG00005015902)	PSMD12 (ENSEASG00005015894)	PITPNC1 (ENSEASG00005015886)	NOL11 (ENSEASG00005015876)	BPTF (ENSEASG00005015848)	ENSEASG00005028423	ENSEASG00005015837	ENSEASG00005015832	ENSEASG00005015750 #20	CEP95 (ENSEASG00005015672) #21	DDX5 (ENSEASG00005014694) #22	POLG2 (ENSEASG00005038753) #24	MILR1 (ENSEASG00005025455) #25	PECAM1 (ENSEASG00005014592) #26	ENSEASG00005014545 #27	ENSEASG00005031168 #27	ENSEASG00005037099 ##27	ERN1 (ENSEASG00005014413) #28	ICAM2 (ENSEASG00005014356) #29	ENSEASG00005034344 #30	SCN4A (ENSEASG00005014277) #31	CD79B (ENSEASG00005014198) #32	ENSEASG00005014196 #33	SMARCD2 (ENSEASG00005013940) #34	PSMC5 (ENSEASG00005013892) #35	FTSJ3 (ENSEASG00005013565) #36
Horse	MODERN SPECIES	2	PRKCA (ENSECAG00000006771) #9	ENSECAG00000053353	CACNG5 (ENSECAG00000031222) #7	CACNG4 (ENSECAG00000007214)	CACNG1 (ENSECAG00000008962)	HELZ (ENSECAG00000010404)	ENSECAG00000056099	PSMD12 (ENSECAG00000012224)	PITPNC1 (ENSECAG00000022070)	NOL11 (ENSECAG00000008252)	BPTF (ENSECAG00000019916)	C11H17orf58 (ENSECAG00000017140)	ENSECAG00000040575	SMURF2 (ENSECAG00000011935) #20	CEP95 (ENSECAG00000020900) #21	DDX5 (ENSECAG00000011132) #22	MILR1 (ENSECAG00000006485) #25	PECAM1 (ENSECAG00000006991) #26	TEX2 (ENSECAG00000046324) #27	ERN1 (ENSECAG00000011262) #28	ENSECAG00000060374	ICAM2 (ENSECAG00000047405) #29	PRR29 (ENSECAG00000005914) #30	SCN4A (ENSECAG00000005968) #31	CD79B (ENSECAG00000037399) #32	ENSECAG00000009154 #33	SMARCD2 (ENSECAG00000011370) #34	PSMC5 (ENSECAG00000023185) #35	FTSJ3 (ENSECAG00000011995) #36	DDX42 (ENSECAG00000022684) #37	CCDC47 (ENSECAG00000014065)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Megabat	MODERN SPECIES	3169															CEP95 (ENSPVAG00000001935) #21	DDX5 (ENSPVAG00000001932) #22	POLG2 (ENSPVAG00000001931) #24	MILR1 (ENSPVAG00000001929) #25	ENSPVAG00000001927 #26
Microchiroptera	ANCESTRAL SPECIES		ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Greater horseshoe bat	MODERN SPECIES	13	CEP112 (ENSRFEG00010006028) #13	APOH (ENSRFEG00010005909) #10	PRKCA (ENSRFEG00010005867) #9	CACNG5 (ENSRFEG00010005828) #7	CACNG4 (ENSRFEG00010005798)	CACNG1 (ENSRFEG00010005775)	HELZ (ENSRFEG00010005738)	PSMD12 (ENSRFEG00010005661)	PITPNC1 (ENSRFEG00010005476)	NOL11 (ENSRFEG00010005395)	BPTF (ENSRFEG00010016666)	C17orf58 (ENSRFEG00010016585)	KPNA2 (ENSRFEG00010016425)	SMURF2 (ENSRFEG00010016363) #20	CEP95 (ENSRFEG00010016046) #21	DDX5 (ENSRFEG00010015738) #22	ENSRFEG00010015686	MILR1 (ENSRFEG00010015672) #25	PECAM1 (ENSRFEG00010015600) #26	TEX2 (ENSRFEG00010015495) #27	ERN1 (ENSRFEG00010015422) #28	ICAM2 (ENSRFEG00010015391) #29	PRR29 (ENSRFEG00010015192) #30	SCN4A (ENSRFEG00010014783) #31	CD79B (ENSRFEG00010014492) #32	ENSRFEG00010014139 #33	ENSRFEG00010013994	SMARCD2 (ENSRFEG00010012902) #34	PSMC5 (ENSRFEG00010012523) #35	FTSJ3 (ENSRFEG00010012469) #36	DDX42 (ENSRFEG00010012371) #37
Microbat	MODERN SPECIES	1037	CEP112 (ENSMLUG00000013982) #13	APOH (ENSMLUG00000001586) #10	ENSMLUG00000028831	PRKCA (ENSMLUG00000001590) #9	CACNG4 (ENSMLUG00000014188)	CACNG1 (ENSMLUG00000014190)	HELZ (ENSMLUG00000000962)	PSMD12 (ENSMLUG00000013464)	PITPNC1 (ENSMLUG00000013473)	ENSMLUG00000013484	BPTF (ENSMLUG00000002285)	ENSMLUG00000000904	ENSMLUG00000027946	SMURF2 (ENSMLUG00000009576) #20	CEP95 (ENSMLUG00000009545) #21	DDX5 (ENSMLUG00000009496) #22	POLG2 (ENSMLUG00000009469) #24	MILR1 (ENSMLUG00000009455) #25	PECAM1 (ENSMLUG00000012364) #26	TEX2 (ENSMLUG00000016763) #27	ERN1 (ENSMLUG00000016729) #28	ICAM2 (ENSMLUG00000014434) #29
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000165440	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Suina	ANCESTRAL SPECIES		ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Chacoan peccary	MODERN SPECIES	817	CDC27 (ENSCWAG00000019376)	MYL4 (ENSCWAG00000019417)	ITGB3 (ENSCWAG00000019455)	EFCAB3 (ENSCWAG00000019546)	ENSCWAG00000019610	ENSCWAG00000019618	ENSCWAG00000019624	ENSCWAG00000019637	PITPNC1 (ENSCWAG00000019653)	NOL11 (ENSCWAG00000019668)	BPTF (ENSCWAG00000019710)	C17orf58 (ENSCWAG00000020001)	KPNA2 (ENSCWAG00000020030)	SMURF2 (ENSCWAG00000020052) #20	CEP95 (ENSCWAG00000020113) #21	DDX5 (ENSCWAG00000020196) #22	POLG2 (ENSCWAG00000020283) #24	MILR1 (ENSCWAG00000020309) #25	PECAM1 (ENSCWAG00000020436) #26	TEX2 (ENSCWAG00000020466) #27	ERN1 (ENSCWAG00000020491) #28	ENSCWAG00000020516	ICAM2 (ENSCWAG00000020528) #29	ENSCWAG00000008037	SCN4A (ENSCWAG00000008152) #31	CD79B (ENSCWAG00000008381) #32	ENSCWAG00000008540 #33	ENSCWAG00000008962	SMARCD2 (ENSCWAG00000009051) #34	PSMC5 (ENSCWAG00000009262) #35	FTSJ3 (ENSCWAG00000009420) #36
Pig	MODERN SPECIES	3	CEP112 (ENSSSCG00000023992) #13	APOH (ENSSSCG00000040910) #10	PRKCA (ENSSSCG00000017268) #9	CACNG5 (ENSSSCG00000036461) #7	CACNG4 (ENSSSCG00000037202)	CACNG1 (ENSSSCG00000017271)	HELZ (ENSSSCG00000017272)	PSMD12 (ENSSSCG00000017273)	PITPNC1 (ENSSSCG00000017274)	NOL11 (ENSSSCG00000054188)	BPTF (ENSSSCG00000033528)	C17orf58 (ENSSSCG00000032181)	KPNA2 (ENSSSCG00000029005)	SMURF2 (ENSSSCG00000032176) #20	CEP95 (ENSSSCG00000028925) #21	DDX5 (ENSSSCG00000032092) #22	POLG2 (ENSSSCG00000036057) #24	MILR1 (ENSSSCG00000032612) #25	PECAM1 (ENSSSCG00000017277) #26	TEX2 (ENSSSCG00000017278) #27	ERN1 (ENSSSCG00000039909) #28	ICAM2 (ENSSSCG00000062259) #29	PRR29 (ENSSSCG00000056561) #30	SCN4A (ENSSSCG00000017282) #31	CD79B (ENSSSCG00000017283) #32	GH1 (ENSSSCG00000034212) #33	ENSSSCG00000017285	SMARCD2 (ENSSSCG00000041822) #34	PSMC5 (ENSSSCG00000017287) #35	FTSJ3 (ENSSSCG00000017288) #36	DDX42 (ENSSSCG00000017289) #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000165440	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Camelidae	ANCESTRAL SPECIES	68	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37	ENSGT00390000013997
Arabian camel	MODERN SPECIES	7	CEP112 (ENSCDRG00005020327) #13	APOH (ENSCDRG00005020375) #10	PRKCA (ENSCDRG00005020399) #9	CACNG5 (ENSCDRG00005020413) #7	CACNG4 (ENSCDRG00005020420)	CACNG1 (ENSCDRG00005020428)	HELZ (ENSCDRG00005020443)	PSMD12 (ENSCDRG00005020464)	PITPNC1 (ENSCDRG00005020499)	NOL11 (ENSCDRG00005020519)	BPTF (ENSCDRG00005020556)	ENSCDRG00005020655	KPNA2 (ENSCDRG00005020660)	SMURF2 (ENSCDRG00005020677) #20	CEP95 (ENSCDRG00005020722) #21	DDX5 (ENSCDRG00005020755) #22	POLG2 (ENSCDRG00005020782) #24	MILR1 (ENSCDRG00005020792) #25	PECAM1 (ENSCDRG00005020811) #26	ENSCDRG00005020908 #27	ENSCDRG00005020878 #27	ENSCDRG00005020918	ERN1 (ENSCDRG00005020928) #28	ENSCDRG00005020945 #29	ENSCDRG00005020954 #29	ENSCDRG00005020964 #29	ENSCDRG00005020977	SCN4A (ENSCDRG00005020983) #31	ENSCDRG00005021002 #32	GH1 (ENSCDRG00005021034) #33	ENSCDRG00005021114
Alpaca	MODERN SPECIES	2228														SMURF2 (ENSVPAG00000010761) #20	CEP95 (ENSVPAG00000010760) #21	DDX5 (ENSVPAG00000010759) #22	POLG2 (ENSVPAG00000010757) #24	ENSVPAG00000010756 #25	ENSVPAG00000010755 #26	TEX2 (ENSVPAG00000010754) #27	ENSVPAG00000010753 #28
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000161207.d	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000161207.d	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000161207.d	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000161207.d	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.a	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d.b.b.a #29	ENSGT00940000161654.d.b.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D.i #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Rambouillet Sheep	MODERN SPECIES	2	FN3KRP (ENSOARG00020010121)	FN3K (ENSOARG00020010188)	TBCD (ENSOARG00020010313)	ZNF750 (ENSOARG00020010645)	ENSOARG00020010688	METRNL (ENSOARG00020010797)	PSMD12 (ENSOARG00020010931)	PITPNC1 (ENSOARG00020011168)	NOL11 (ENSOARG00020011385)	BPTF (ENSOARG00020011553)	C17orf58 (ENSOARG00020013996)	ENSOARG00020014070	KPNA2 (ENSOARG00020014099)	SMURF2 (ENSOARG00020014152) #20	CEP95 (ENSOARG00020014316) #21	DDX5 (ENSOARG00020014410) #22	POLG2 (ENSOARG00020014670) #24	MILR1 (ENSOARG00020014728) #25	PECAM1 (ENSOARG00020014798) #26	TEX2 (ENSOARG00020014850) #27	ERN1 (ENSOARG00020015052) #28	ENSOARG00020015296 #29	ENSOARG00020015462 #29	ENSOARG00020015527 #29	ENSOARG00020015692 #29	PRR29 (ENSOARG00020015847) #30	SCN4A (ENSOARG00020016096) #31	CD79B (ENSOARG00020016328) #32	GH (ENSOARG00020016511) #33	ENSOARG00020017343	SMARCD2 (ENSOARG00020017438) #34
Goat	MODERN SPECIES	10	RAB40B (ENSCHIG00000010552)	FN3KRP (ENSCHIG00000024593)	FN3K (ENSCHIG00000020548)	ZNF750 (ENSCHIG00000025909)	TBCD (ENSCHIG00000019855)	B3GNTL1 (ENSCHIG00000008807)	METRNL (ENSCHIG00000020298)	PSMD12 (ENSCHIG00000025493)	PITPNC1 (ENSCHIG00000023010)	NOL11 (ENSCHIG00000025602)	BPTF (ENSCHIG00000012772)	C17orf58 (ENSCHIG00000021851)	ENSCHIG00000026666	SMURF2 (ENSCHIG00000027010) #20	CEP95 (ENSCHIG00000015865) #21	DDX5 (ENSCHIG00000011800) #22	POLG2 (ENSCHIG00000017524) #24	ENSCHIG00000026501 #25	PECAM1 (ENSCHIG00000018960) #26	ENSCHIG00000008613	TEX2 (ENSCHIG00000020654) #27	ERN1 (ENSCHIG00000025852) #28	ENSCHIG00000019712 #29	ENSCHIG00000026728 #29	SCN4A (ENSCHIG00000021518) #31	CD79B (ENSCHIG00000016944) #32	GH1 (ENSCHIG00000011515) #33	ENSCHIG00000018669 #33	ENSCHIG00000023490	SMARCD2 (ENSCHIG00000011609) #34	PSMC5 (ENSCHIG00000020396) #35
Bovinae	ANCESTRAL SPECIES		ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d.a.b #29	ENSGT00990000210492	ENSGT00940000161654.d.a.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34
Bos	ANCESTRAL SPECIES	1	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d.a.b #29	ENSGT00940000161654.c #29	ENSGT00940000161654.d.a.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34
Bos_a	ANCESTRAL SPECIES		ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.c #29	ENSGT00940000161654.d.a.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT01030000235089	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35
Wild yak	MODERN SPECIES	110	ENSBMUG00000009469	FN3KRP (ENSBMUG00000009449)	ZNF750 (ENSBMUG00000009436)	TBCD (ENSBMUG00000009421)	B3GNTL1 (ENSBMUG00000009380)	METRNL (ENSBMUG00000009363)	PSMD12 (ENSBMUG00000009344)	ENSBMUG00000009321	PITPNC1 (ENSBMUG00000009292)	NOL11 (ENSBMUG00000009255)	BPTF (ENSBMUG00000009032)	ENSBMUG00000008831	KPNA2 (ENSBMUG00000008811)	SMURF2 (ENSBMUG00000008792) #20	CEP95 (ENSBMUG00000008738) #21	DDX5 (ENSBMUG00000008708) #22	POLG2 (ENSBMUG00000008684) #24	MILR1 (ENSBMUG00000008672) #25	PECAM1 (ENSBMUG00000008654) #26	TEX2 (ENSBMUG00000008597) #27	ERN1 (ENSBMUG00000008575) #28	ENSBMUG00000008544 #29
Domestic yak	MODERN SPECIES	10	FN3K (ENSBGRG00000006866)	TBCD (ENSBGRG00000006906)	ZNF750 (ENSBGRG00000007506)	B3GNTL1 (ENSBGRG00000007557)	METRNL (ENSBGRG00000007772)	ENSBGRG00000007833	PSMD12 (ENSBGRG00000007870)	PITPNC1 (ENSBGRG00000008106)	ENSBGRG00000008308	NOL11 (ENSBGRG00000008414)	BPTF (ENSBGRG00000008954)	C17orf58 (ENSBGRG00000009998)	KPNA2 (ENSBGRG00000010086)	SMURF2 (ENSBGRG00000010152) #20	CEP95 (ENSBGRG00000010246) #21	DDX5 (ENSBGRG00000010365) #22	POLG2 (ENSBGRG00000010824) #24	MILR1 (ENSBGRG00000010980) #25	PECAM1 (ENSBGRG00000011037) #26	TEX2 (ENSBGRG00000011148) #27	ERN1 (ENSBGRG00000011837) #28	ENSBGRG00000012072 #29	ENSBGRG00000012266 #29	SCN4A (ENSBGRG00000012607) #31	CD79B (ENSBGRG00000012785) #32	ENSBGRG00000012946 #33	ENSBGRG00000013204	SMARCD2 (ENSBGRG00000013245) #34	PSMC5 (ENSBGRG00000013405) #35	FTSJ3 (ENSBGRG00000009060) #36	DDX42 (ENSBGRG00000009386) #37
Bos_b	ANCESTRAL SPECIES	21	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654.d.b.b.b #29	ENSGT00940000161654.c #29	ENSGT00940000161654.d.a.a #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654 #34	ENSGT01020000230346.F #35
Cow	MODERN SPECIES	10	RAB40B (ENSBTAG00000015387)	FN3KRP (ENSBTAG00000015390)	ZNF750 (ENSBTAG00000015406)	TBCD (ENSBTAG00000015414)	B3GNTL1 (ENSBTAG00000052072)	METRNL (ENSBTAG00000004787)	PSMD12 (ENSBTAG00000002423)	ENSBTAG00000007354	PITPNC1 (ENSBTAG00000044065)	NOL11 (ENSBTAG00000015951)	BPTF (ENSBTAG00000014598)	C19H17orf58 (ENSBTAG00000053910)	KPNA2 (ENSBTAG00000012225)	SMURF2 (ENSBTAG00000019853) #20	CEP95 (ENSBTAG00000014002) #21	DDX5 (ENSBTAG00000018423) #22	POLG2 (ENSBTAG00000018420) #24	MILR1 (ENSBTAG00000007409) #25	PECAM1 (ENSBTAG00000012066) #26	TEX2 (ENSBTAG00000004723) #27	ERN1 (ENSBTAG00000016799) #28	ENSBTAG00000055302 #29	ENSBTAG00000019432 #29	SCN4A (ENSBTAG00000004770) #31	CD79B (ENSBTAG00000044204) #32	GH1 (ENSBTAG00000017220) #33	TCAM1 (ENSBTAG00000024947)	SMARCD2 (ENSBTAG00000021062) #34	PSMC5 (ENSBTAG00000021061) #35	FTSJ3 (ENSBTAG00000021060) #36	DDX42 (ENSBTAG00000021058) #37
Hybrid Bos Indicus	MODERN SPECIES	10	FN3KRP (ENSBIXG00005017059)	FN3K (ENSBIXG00005007517)	ZNF750 (ENSBIXG00005017103)	TBCD (ENSBIXG00005017341)	B3GNTL1 (ENSBIXG00005017429)	METRNL (ENSBIXG00005017470)	ENSBIXG00005017488	PSMD12 (ENSBIXG00005017579)	PITPNC1 (ENSBIXG00005017646)	NOL11 (ENSBIXG00005002876)	BPTF (ENSBIXG00005018268)	C17orf58 (ENSBIXG00005018359)	KPNA2 (ENSBIXG00005018373)	SMURF2 (ENSBIXG00005018450) #20	CEP95 (ENSBIXG00005018487) #21	DDX5 (ENSBIXG00005018609) #22	POLG2 (ENSBIXG00005018643) #24	ENSBIXG00005018648	MILR1 (ENSBIXG00005007566) #25	PECAM1 (ENSBIXG00005018717) #26	TEX2 (ENSBIXG00005018810) #27	ERN1 (ENSBIXG00005018957) #28	ENSBIXG00005018978 #29	ENSBIXG00005018991 #29	ENSBIXG00005019006 #29	ENSBIXG00005019123 #29	PRR29 (ENSBIXG00005019177) #30	SCN4A (ENSBIXG00005019211) #31	CD79B (ENSBIXG00005019272) #32	ENSBIXG00005019402 #33	ENSBIXG00005019432
American bison	MODERN SPECIES	3285	FN3KRP (ENSBBBG00000003668)	FN3K (ENSBBBG00000014858)	TBCD (ENSBBBG00000014844)	ZNF750 (ENSBBBG00000014805)	B3GNTL1 (ENSBBBG00000014796)	METRNL (ENSBBBG00000014783)	PSMD12 (ENSBBBG00000014773)	PITPNC1 (ENSBBBG00000014733)	ENSBBBG00000014706	NOL11 (ENSBBBG00000003567)	BPTF (ENSBBBG00000014673)	ENSBBBG00000002873	ENSBBBG00000007129	SMURF2 (ENSBBBG00000007494) #20	CEP95 (ENSBBBG00000003405) #21	DDX5 (ENSBBBG00000014507) #22	POLG2 (ENSBBBG00000002882) #24	MILR1 (ENSBBBG00000014459) #25	PECAM1 (ENSBBBG00000014443) #26	TEX2 (ENSBBBG00000003328) #27	ERN1 (ENSBBBG00000001408) #28	ENSBBBG00000014382 #29	ENSBBBG00000009119	SCN4A (ENSBBBG00000003281) #31	ENSBBBG00000014306	CD79B (ENSBBBG00000014300) #32	ENSBBBG00000014281 #33	ENSBBBG00000003240	SMARCD2 (ENSBBBG00000014270) #34	PSMC5 (ENSBBBG00000014258) #35	FTSJ3 (ENSBBBG00000003224) #36
Siberian musk deer	MODERN SPECIES	1210	RAB40B (ENSMMSG00000022955)	FN3KRP (ENSMMSG00000022949)	FN3K (ENSMMSG00000022941)	ZNF750 (ENSMMSG00000022937)	TBCD (ENSMMSG00000022880)	B3GNTL1 (ENSMMSG00000022843)	METRNL (ENSMMSG00000022827)	PSMD12 (ENSMMSG00000022799)	ENSMMSG00000022779	NOL11 (ENSMMSG00000022761)	BPTF (ENSMMSG00000022444)	C17orf58 (ENSMMSG00000022394)	KPNA2 (ENSMMSG00000022378)	SMURF2 (ENSMMSG00000022347) #20	CEP95 (ENSMMSG00000022233) #21	DDX5 (ENSMMSG00000022147) #22	POLG2 (ENSMMSG00000022104) #24	ENSMMSG00000022065 #25	PECAM1 (ENSMMSG00000022011) #26	TEX2 (ENSMMSG00000021971) #27	ERN1 (ENSMMSG00000021903) #28	ICAM2 (ENSMMSG00000021886) #29	ENSMMSG00000021858	SCN4A (ENSMMSG00000021789) #31	CD79B (ENSMMSG00000021730) #32	ENSMMSG00000021583 #33	ENSMMSG00000021561	SMARCD2 (ENSMMSG00000021396) #34	PSMC5 (ENSMMSG00000021252) #35	FTSJ3 (ENSMMSG00000021153) #36	DDX42 (ENSMMSG00000021083) #37
Yarkand deer	MODERN SPECIES	28	FN3K (ENSCHYG00000019188)	ZNF750 (ENSCHYG00000019158)	TBCD (ENSCHYG00000017773)	B3GNTL1 (ENSCHYG00000017526)	METRNL (ENSCHYG00000017404)	ENSCHYG00000017380	PSMD12 (ENSCHYG00000017208)	PITPNC1 (ENSCHYG00000017096)	NOL11 (ENSCHYG00000017046)	ENSCHYG00000017026	BPTF (ENSCHYG00000015527)	ENSCHYG00000015384	KPNA2 (ENSCHYG00000015232)	SMURF2 (ENSCHYG00000014913) #20	CEP95 (ENSCHYG00000014467) #21	DDX5 (ENSCHYG00000014057) #22	POLG2 (ENSCHYG00000013988) #24	MILR1 (ENSCHYG00000013943) #25	PECAM1 (ENSCHYG00000013588) #26	TEX2 (ENSCHYG00000013398) #27	ERN1 (ENSCHYG00000013186) #28	ENSCHYG00000013121 #30	SCN4A (ENSCHYG00000012837) #31	CD79B (ENSCHYG00000012647) #32	ENSCHYG00000012299 #33	ENSCHYG00000012234	SMARCD2 (ENSCHYG00000012047) #34	PSMC5 (ENSCHYG00000011842) #35	FTSJ3 (ENSCHYG00000011693) #36	DDX42 (ENSCHYG00000011552) #37	CCDC47 (ENSCHYG00000011436)
Cetacea	ANCESTRAL SPECIES	5	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.q.a #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	12	FN3KRP (ENSBMSG00010021209)	FN3K (ENSBMSG00010021229)	TBCD (ENSBMSG00010021261)	ENSBMSG00010021275	ZNF750 (ENSBMSG00010021286)	ENSBMSG00010021295	METRNL (ENSBMSG00010021306)	PSMD12 (ENSBMSG00010021318)	PITPNC1 (ENSBMSG00010021350)	NOL11 (ENSBMSG00010021388)	BPTF (ENSBMSG00010021472)	C17orf58 (ENSBMSG00010021579)	KPNA2 (ENSBMSG00010021590)	SMURF2 (ENSBMSG00010021607) #20	CEP95 (ENSBMSG00010021632) #21	ENSBMSG00010021683 #22	POLG2 (ENSBMSG00010021711) #24	MILR1 (ENSBMSG00010021717) #25	ENSBMSG00010021723	PECAM1 (ENSBMSG00010021730) #26	TEX2 (ENSBMSG00010021748) #27	ERN1 (ENSBMSG00010021757) #28	ENSBMSG00010021774	ICAM2 (ENSBMSG00010021780) #29	PRR29 (ENSBMSG00010021793) #30	SCN4A (ENSBMSG00010021817) #31	CD79B (ENSBMSG00010021836) #32	ENSBMSG00010021865 #33	ENSBMSG00010021912	ENSBMSG00010014546 #34	PSMC5 (ENSBMSG00010014695) #35
Blue whale	MODERN SPECIES		ENSBMSG00010004944	ENSBMSG00010005002	ENSBMSG00010005028	ENSBMSG00010005054	PDZK1IP1 (ENSBMSG00010005121)	TAL1 (ENSBMSG00010005132)	STIL (ENSBMSG00010005150)	CMPK1 (ENSBMSG00010005177)	FOXE3 (ENSBMSG00010005194)	ENSBMSG00010005215	TRABD2B (ENSBMSG00010005224)	SLC5A9 (ENSBMSG00010005258)	SPATA6 (ENSBMSG00010005335)	AGBL4 (ENSBMSG00010005358)	BEND5 (ENSBMSG00010005413)	ENSBMSG00010005423 #22	ELAVL4 (ENSBMSG00010005482)	DMRTA2 (ENSBMSG00010005622)	FAF1 (ENSBMSG00010005636)	CDKN2C (ENSBMSG00010005658)	C1orf185 (ENSBMSG00010005668)	RNF11 (ENSBMSG00010005680)	TTC39A (ENSBMSG00010005702)	EPS15 (ENSBMSG00010005767)	ENSBMSG00010005842	NRDC (ENSBMSG00010005952)	RAB3B (ENSBMSG00010005996)	TXNDC12 (ENSBMSG00010006006)	ENSBMSG00010006017	ENSBMSG00010006025	ENSBMSG00010006038
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.q.a #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Sperm whale	MODERN SPECIES	5	WDR45B (ENSPCTG00005017369)	ENSPCTG00005017341	FN3KRP (ENSPCTG00005017302)	FN3K (ENSPCTG00005017261)	ZNF750 (ENSPCTG00005017240)	ENSPCTG00005017080	METRNL (ENSPCTG00005016981)	B3GNTL1 (ENSPCTG00005016833)	PSMD12 (ENSPCTG00005016575)	PITPNC1 (ENSPCTG00005016483)	NOL11 (ENSPCTG00005016439)	BPTF (ENSPCTG00005015378)	C14H17orf58 (ENSPCTG00005015232)	SMURF2 (ENSPCTG00005014952) #20	CEP95 (ENSPCTG00005014475) #21	DDX5 (ENSPCTG00005013980) #22	POLG2 (ENSPCTG00005013800) #24	MILR1 (ENSPCTG00005013669) #25	ENSPCTG00005013643	PECAM1 (ENSPCTG00005013610) #26	ENSPCTG00005013578 #28	TEX2 (ENSPCTG00005013445) #27	ENSPCTG00005013212 #33	ENSPCTG00005013084	SMARCD2 (ENSPCTG00005012899) #34	PSMC5 (ENSPCTG00005012759) #35	FTSJ3 (ENSPCTG00005012703) #36	DDX42 (ENSPCTG00005012358) #37	CCDC47 (ENSPCTG00005012224)	STRADA (ENSPCTG00005010225)	LIMD2 (ENSPCTG00005010012)
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.q.a #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36	ENSGT00940000156559 #37
Dolphin	MODERN SPECIES	2288														SMURF2 (ENSTTRG00000008855) #20	CEP95 (ENSTTRG00000008836) #21	DDX5 (ENSTTRG00000008793) #22	POLG2 (ENSTTRG00000008785) #24	MILR1 (ENSTTRG00000008771) #25
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00950000182890.D.c.b.a.b.b.b.d.f.b	ENSGT00940000153510.a	ENSGT00940000163468	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00390000016988.a.a.a.a.a.b	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.q.a #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	12	FN3K (ENSPSNG00000020591)	ZNF750 (ENSPSNG00000020572)	TBCD (ENSPSNG00000020467)	ENSPSNG00000020386	METRNL (ENSPSNG00000020354)	ENSPSNG00000020336	PSMD12 (ENSPSNG00000020312)	ENSPSNG00000020273	PITPNC1 (ENSPSNG00000020233)	NOL11 (ENSPSNG00000020197)	BPTF (ENSPSNG00000019612)	C17orf58 (ENSPSNG00000019463)	ENSPSNG00000019429	SMURF2 (ENSPSNG00000019369) #20	CEP95 (ENSPSNG00000019241) #21	DDX5 (ENSPSNG00000019077) #22	POLG2 (ENSPSNG00000019028) #24	MILR1 (ENSPSNG00000018971) #25	PECAM1 (ENSPSNG00000018788) #26	TEX2 (ENSPSNG00000018686) #27	ENSPSNG00000018645	ERN1 (ENSPSNG00000018609) #28	ICAM2 (ENSPSNG00000018484) #29	PRR29 (ENSPSNG00000018362) #30	SCN4A (ENSPSNG00000018145) #31	CD79B (ENSPSNG00000017966) #32	ENSPSNG00000017651 #33	ENSPSNG00000017544	ENSPSNG00000017366 #34	PSMC5 (ENSPSNG00000017340) #35	FTSJ3 (ENSPSNG00000017247) #36
Vaquita	MODERN SPECIES		ENSPSNG00000008408	ENSPSNG00000008499	PDZK1IP1 (ENSPSNG00000008584)	TAL1 (ENSPSNG00000008617)	STIL (ENSPSNG00000008673)	CMPK1 (ENSPSNG00000008760)	FOXE3 (ENSPSNG00000008840)	FOXD2 (ENSPSNG00000008853)	TRABD2B (ENSPSNG00000008890)	ENSPSNG00000008955	ENSPSNG00000008987	SLC5A9 (ENSPSNG00000009041)	SPATA6 (ENSPSNG00000009229)	AGBL4 (ENSPSNG00000009355)	BEND5 (ENSPSNG00000009518)	ENSPSNG00000009540 #22	ELAVL4 (ENSPSNG00000009710)	DMRTA2 (ENSPSNG00000010437)	FAF1 (ENSPSNG00000010473)	CDKN2C (ENSPSNG00000010560)	ENSPSNG00000010600	C1orf185 (ENSPSNG00000010619)	RNF11 (ENSPSNG00000010799)	TTC39A (ENSPSNG00000010892)	EPS15 (ENSPSNG00000011562)	ENSPSNG00000011761	NRDC (ENSPSNG00000012358)	ENSPSNG00000012757	RAB3B (ENSPSNG00000012890)	TXNDC12 (ENSPSNG00000012967)	ENSPSNG00000013037
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000163468	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463.h #27	ENSGT00390000016988.a.a.a.a.a.b	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30	ENSGT00940000159417 #31	ENSGT00940000154363.B #32	ENSGT00950000182818.D #33	ENSGT00940000163726	ENSGT00940000158654.q.a #34	ENSGT01020000230346.F #35	ENSGT00550000075004 #36
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	26	FN3K (ENSDLEG00000007908)	ZNF750 (ENSDLEG00000007903)	TBCD (ENSDLEG00000007412)	ENSDLEG00000007330	B3GNTL1 (ENSDLEG00000007311)	METRNL (ENSDLEG00000007300)	ENSDLEG00000007296	PSMD12 (ENSDLEG00000007289)	PITPNC1 (ENSDLEG00000007270)	NOL11 (ENSDLEG00000007257)	BPTF (ENSDLEG00000007143)	C17orf58 (ENSDLEG00000007105)	KPNA2 (ENSDLEG00000007056)	SMURF2 (ENSDLEG00000007008) #20	CEP95 (ENSDLEG00000006871) #21	DDX5 (ENSDLEG00000006545) #22	POLG2 (ENSDLEG00000006509) #24	MILR1 (ENSDLEG00000006502) #25	PECAM1 (ENSDLEG00000006438) #26	TEX2 (ENSDLEG00000006426) #27	ENSDLEG00000006420	ERN1 (ENSDLEG00000006357) #28	ICAM2 (ENSDLEG00000006332) #29	SCN4A (ENSDLEG00000006303) #31	CD79B (ENSDLEG00000006292) #32	ENSDLEG00000006283 #33	ENSDLEG00000006281	ENSDLEG00000006275	ENSDLEG00000006269 #34	PSMC5 (ENSDLEG00000006260) #35	FTSJ3 (ENSDLEG00000006250) #36
Beluga whale	MODERN SPECIES	74	ENSDLEG00000014649	PDZK1IP1 (ENSDLEG00000014775)	TAL1 (ENSDLEG00000014787)	STIL (ENSDLEG00000014810)	CMPK1 (ENSDLEG00000014989)	FOXE3 (ENSDLEG00000015041)	FOXD2 (ENSDLEG00000015047)	ENSDLEG00000015052	TRABD2B (ENSDLEG00000015057)	ENSDLEG00000015069	ENSDLEG00000015073	SLC5A9 (ENSDLEG00000015091)	SPATA6 (ENSDLEG00000015119)	AGBL4 (ENSDLEG00000015168)	BEND5 (ENSDLEG00000015199)	ENSDLEG00000015227 #22	ENSDLEG00000015238	ELAVL4 (ENSDLEG00000015258)	DMRTA2 (ENSDLEG00000016008)	FAF1 (ENSDLEG00000016028)	CDKN2C (ENSDLEG00000016125)	C1orf185 (ENSDLEG00000016132)	RNF11 (ENSDLEG00000016174)	TTC39A (ENSDLEG00000016187)	EPS15 (ENSDLEG00000016250)	ENSDLEG00000016334	OSBPL9 (ENSDLEG00000016465)	NRDC (ENSDLEG00000017921)	ENSDLEG00000018017	RAB3B (ENSDLEG00000018039)	TXNDC12 (ENSDLEG00000018054)
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	316	FN3KRP (ENSMMNG00015017639)	FN3K (ENSMMNG00015017607)	ZNF750 (ENSMMNG00015017588)	TBCD (ENSMMNG00015017445)	B3GNTL1 (ENSMMNG00015017342)	METRNL (ENSMMNG00015017311)	PSMD12 (ENSMMNG00015017282)	ENSMMNG00015017227	PITPNC1 (ENSMMNG00015017192)	NOL11 (ENSMMNG00015017146)	BPTF (ENSMMNG00015016566)	ENSMMNG00015016348	ENSMMNG00015016273	SMURF2 (ENSMMNG00015016205) #20	CEP95 (ENSMMNG00015016004) #21	DDX5 (ENSMMNG00015021168) #22	POLG2 (ENSMMNG00015021138) #24	MILR1 (ENSMMNG00015021122) #25	PECAM1 (ENSMMNG00015021094) #26	TEX2 (ENSMMNG00015021060) #27	ENSMMNG00015021037	ERN1 (ENSMMNG00015020996) #28	ICAM2 (ENSMMNG00015020970) #29	PRR29 (ENSMMNG00015020935) #30	SCN4A (ENSMMNG00015020907) #31	CD79B (ENSMMNG00015020872) #32	ENSMMNG00015020826 #33	ENSMMNG00015020800	SMARCD2 (ENSMMNG00015020741) #34	PSMC5 (ENSMMNG00015020703) #35	FTSJ3 (ENSMMNG00015020678) #36
Narwhal	MODERN SPECIES	304	ENSMMNG00015017717	ENSMMNG00015017692	ENSMMNG00015017646	PDZK1IP1 (ENSMMNG00015017600)	TAL1 (ENSMMNG00015017573)	STIL (ENSMMNG00015017497)	CMPK1 (ENSMMNG00015017341)	FOXE3 (ENSMMNG00015017301)	FOXD2 (ENSMMNG00015017290)	ENSMMNG00015017274	TRABD2B (ENSMMNG00015017248)	ENSMMNG00015017223	SLC5A9 (ENSMMNG00015017189)	SPATA6 (ENSMMNG00015017114)	BEND5 (ENSMMNG00015017067)	ENSMMNG00015017042 #22	AGBL4 (ENSMMNG00015016854)	ELAVL4 (ENSMMNG00015016468)	DMRTA2 (ENSMMNG00015016305)	FAF1 (ENSMMNG00015016261)	CDKN2C (ENSMMNG00015016226)	ENSMMNG00015016200	RNF11 (ENSMMNG00015016177)	TTC39A (ENSMMNG00015015942)	EPS15 (ENSMMNG00015015790)	ENSMMNG00015015722	OSBPL9 (ENSMMNG00015015491)	NRDC (ENSMMNG00015015338)	ENSMMNG00015015285	RAB3B (ENSMMNG00015015267)	ENSMMNG00015015254
Eulipotyphla	ANCESTRAL SPECIES	272														ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24
Hedgehog	MODERN SPECIES	1155															CEP95 (ENSEEUG00000008246) #21	ENSEEUG00000008206 #22
Common shrew	MODERN SPECIES	2520														SMURF2 (ENSSARG00000007857) #20	CEP95 (ENSSARG00000007833) #21	ENSSARG00000007813 #22	POLG2 (ENSSARG00000007760) #24
Atlantogenata	ANCESTRAL SPECIES	21	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463 #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30
Xenarthra	ANCESTRAL SPECIES	418													ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463 #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29	ENSGT00390000002000 #30
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2592												MAP9 (ENSDNOG00000012086)	ENSDNOG00000001080	NPY2R (ENSDNOG00000017812)	ENSDNOG00000042379	ENSDNOG00000039281 #22
Armadillo	MODERN SPECIES	1121											ENSDNOG00000038577	ENSDNOG00000019151	SMURF2 (ENSDNOG00000032050) #20	ENSDNOG00000041286	CEP95 (ENSDNOG00000042222) #21	ENSDNOG00000004247 #22	POLG2 (ENSDNOG00000006906) #24	MILR1 (ENSDNOG00000005695) #25	PECAM1 (ENSDNOG00000012963) #26	TEX2 (ENSDNOG00000015515) #27	ENSDNOG00000045259	ERN1 (ENSDNOG00000009467) #28	ICAM2 (ENSDNOG00000002412) #29	ENSDNOG00000036008 #30
Sloth	MODERN SPECIES	907																DDX5 (ENSCHOG00000008207) #22
Afrotheria	ANCESTRAL SPECIES	18	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463 #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29
Afrotheria_a	ANCESTRAL SPECIES	25	ENSGT00390000006544 #13	ENSGT00940000157228 #10	ENSGT00940000156104.B #9	ENSGT01050000244961.a.b #7	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563 #20	ENSGT00390000005412 #21	ENSGT00940000154705.A #22	ENSGT00940000153759.a.b #24	ENSGT01050000244808.A.b.b.b #25	ENSGT01070000253837 #26	ENSGT00390000000463 #27	ENSGT00940000159761 #28	ENSGT00940000161654 #29
Elephant	MODERN SPECIES	424	CEP112 (ENSLAFG00000009567) #13	APOH (ENSLAFG00000026955) #10	PRKCA (ENSLAFG00000005785) #9	CACNG5 (ENSLAFG00000028822) #7	CACNG4 (ENSLAFG00000018580)	CACNG1 (ENSLAFG00000018581)	HELZ (ENSLAFG00000003860)	PSMD12 (ENSLAFG00000010876)	PITPNC1 (ENSLAFG00000006084)	NOL11 (ENSLAFG00000002021)	BPTF (ENSLAFG00000017552)	ENSLAFG00000020879	KPNA2 (ENSLAFG00000022875)	SMURF2 (ENSLAFG00000004466) #20	CEP95 (ENSLAFG00000022114) #21	DDX5 (ENSLAFG00000004461) #22	POLG2 (ENSLAFG00000011216) #24	ENSLAFG00000009673 #25	PECAM1 (ENSLAFG00000012603) #26	TEX2 (ENSLAFG00000008507) #27	ERN1 (ENSLAFG00000008504) #28	ICAM2 (ENSLAFG00000005001) #29	ENSLAFG00000030259
Hyrax	MODERN SPECIES	838														SMURF2 (ENSPCAG00000007298) #20	CEP95 (ENSPCAG00000007182) #21	DDX5 (ENSPCAG00000007111) #22
Tenrec	MODERN SPECIES	1123														SMURF2 (ENSETEG00000019956) #20	CEP95 (ENSETEG00000019953) #21	DDX5 (ENSETEG00000019950) #22