Glires	ANCESTRAL SPECIES	6	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00940000154593.b	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00940000154593.b	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00940000154593.b	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00940000154593.b	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Northern American deer mouse	MODERN SPECIES	18	Cenpn (ENSPEMG00000002034) #7	ENSPEMG00000020157 #8	Cdyl2 (ENSPEMG00000019625) #9	Dynlrb2 (ENSPEMG00000019948) #10	Maf (ENSPEMG00000019355) #11	ENSPEMG00000030824 #12	Wwox (ENSPEMG00000016944) #13	Clec3a (ENSPEMG00000031227) #14	Vat1l (ENSPEMG00000015665) #15	Nudt7 (ENSPEMG00000015550) #16	Adamts18 (ENSPEMG00000017721) #17	Syce1l (ENSPEMG00000007573) #18	Mon1b (ENSPEMG00000010449) #19	Cntnap4 (ENSPEMG00000012271) #20	Terf2ip (ENSPEMG00000004753) #21	Kars (ENSPEMG00000012277) #22	Adat1 (ENSPEMG00000013185) #23	ENSPEMG00000029312 #24	Tmem231 (ENSPEMG00000015338) #25	Chst5 (ENSPEMG00000001162) #26	Tmem170 (ENSPEMG00000027661) #27	ENSPEMG00000009406 #28	Bcar1 (ENSPEMG00000001868) #29	Ctrb1 (ENSPEMG00000012391) #30	Zfp1 (ENSPEMG00000027686) #31	Ldhd (ENSPEMG00000011279) #32	Znrf1 (ENSPEMG00000016826) #33	Wdr59 (ENSPEMG00000017222) #34	Fa2h (ENSPEMG00000014966) #35	Mlkl (ENSPEMG00000015662) #36	Rfwd3 (ENSPEMG00000017293) #37
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	12	ENSMOCG00000021673	ENSMOCG00000022106	ENSMOCG00000022378	Mt4 (ENSMOCG00000002725)	Bbs2 (ENSMOCG00000021993)	Ogfod1 (ENSMOCG00000022366)	Nudt21 (ENSMOCG00000018234)	Amfr (ENSMOCG00000006403)	ENSMOCG00000002356	Ces5a (ENSMOCG00000018804)	ENSMOCG00000009344	ENSMOCG00000022115	Ces1g (ENSMOCG00000011151)	ENSMOCG00000021229	Terf2ip (ENSMOCG00000013512) #21	ENSMOCG00000011829 #22	Adat1 (ENSMOCG00000018424) #23	ENSMOCG00000006618 #24	Tmem231 (ENSMOCG00000015639) #25	Tmem170 (ENSMOCG00000019466) #27	Cfdp1 (ENSMOCG00000022266) #28	Bcar1 (ENSMOCG00000009928) #29	Ctrb1 (ENSMOCG00000001435) #30	Zfp1 (ENSMOCG00000002761) #31	Ldhd (ENSMOCG00000022757) #32	Znrf1 (ENSMOCG00000013325) #33	Wdr59 (ENSMOCG00000002685) #34	Fa2h (ENSMOCG00000000805) #35	ENSMOCG00000007184	Mlkl (ENSMOCG00000011266) #36	Rfwd3 (ENSMOCG00000022178) #37
Prairie vole	MODERN SPECIES	360	Cstf2 (ENSMOCG00000008081)	Sytl4 (ENSMOCG00000020073)	Srpx2 (ENSMOCG00000003969)	Tspan6 (ENSMOCG00000001068)	Tnmd (ENSMOCG00000000192)	Pcdh19 (ENSMOCG00000013710)	ENSMOCG00000016427	Diaph2 (ENSMOCG00000004544)	ENSMOCG00000008368	ENSMOCG00000018722	Prrg1 (ENSMOCG00000015594)	ENSMOCG00000019110	Cfap47 (ENSMOCG00000020168)	ENSMOCG00000018300	Mageb16 (ENSMOCG00000002574)	ENSMOCG00000019029 #22	ENSMOCG00000013562	Tbl1x (ENSMOCG00000002063)	Prkx (ENSMOCG00000003139)	Pbsn (ENSMOCG00000005173)	ENSMOCG00000019602	Msn (ENSMOCG00000010407)	Vsig4 (ENSMOCG00000000197)	Hsf3 (ENSMOCG00000003224)	Heph (ENSMOCG00000017685)	Gpr165 (ENSMOCG00000003694)	Pgr15l (ENSMOCG00000004906)	Eda2r (ENSMOCG00000020804)	ENSMOCG00000017157	ENSMOCG00000001177	ENSMOCG00000018755
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Chinese hamster chok1gshd	MODERN SPECIES	112	Wwox (ENSCGRG00001021234) #13	ENSCGRG00001011674	ENSCGRG00001011032	ENSCGRG00001019630	Clec3a (ENSCGRG00001006598) #14	Vat1l (ENSCGRG00001022889) #15	Nudt7 (ENSCGRG00001016438) #16	ENSCGRG00001010096	ENSCGRG00001011004	Adamts18 (ENSCGRG00001010706) #17	Syce1l (ENSCGRG00001015133) #18	Mon1b (ENSCGRG00001022130) #19	Cntnap4 (ENSCGRG00001004585) #20	ENSCGRG00001018725	Terf2ip (ENSCGRG00001014122) #21	KARS (ENSCGRG00001004055) #22	Adat1 (ENSCGRG00001018488) #23	ENSCGRG00001016653 #24	Tmem231 (ENSCGRG00001024098) #25	Chst5 (ENSCGRG00001005850) #26	Tmem170 (ENSCGRG00001018534) #27	Cfdp1 (ENSCGRG00001015423) #28	Bcar1 (ENSCGRG00001002469) #29	Ctrb1 (ENSCGRG00001009962) #30	Dph3 (ENSCGRG00001009461)	Zfp1 (ENSCGRG00001010967) #31	Ldhd (ENSCGRG00001019430) #32	Znrf1 (ENSCGRG00001022179) #33	Wdr59 (ENSCGRG00001016673) #34	Fa2h (ENSCGRG00001000708) #35	Mlkl (ENSCGRG00001014734) #36
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010.bb.b #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Rat	MODERN SPECIES	10	Cdyl2 (ENSRNOG00000042888) #9	Dynlrb2 (ENSRNOG00000012450)	Maf (ENSRNOG00000012428) #11	Wwox (ENSRNOG00000012030) #13	Clec3a (ENSRNOG00000070954) #14	Vat1l (ENSRNOG00000011989) #15	Nudt7 (ENSRNOG00000011976) #16	ENSRNOG00000066574	Adamts18 (ENSRNOG00000011575) #17	Mon1b (ENSRNOG00000011552) #19	Syce1l (ENSRNOG00000031097) #18	Cntnap4 (ENSRNOG00000011231) #20	AC126899.1 (ENSRNOG00000011065)	AC117869.1 (ENSRNOG00000031439)	Terf2ip (ENSRNOG00000010712) #21	Kars1 (ENSRNOG00000019456) #22	Adat1 (ENSRNOG00000019434) #23	Gabarapl3 (ENSRNOG00000019425) #24	Tmem231 (ENSRNOG00000021517) #25	Chst5 (ENSRNOG00000021521) #26	Tmem170a (ENSRNOG00000049019) #27	Cfdp1 (ENSRNOG00000019326) #28	Bcar1 (ENSRNOG00000019253) #29	Ctrb1 (ENSRNOG00000019068) #30	Zfp1 (ENSRNOG00000019059) #31	Ldhd (ENSRNOG00000019036) #32	Znrf1 (ENSRNOG00000019028) #33	LOC120098629 (ENSRNOG00000033224)	Wdr59 (ENSRNOG00000018967) #34	Fa2h (ENSRNOG00000018950) #35	Mlkl (ENSRNOG00000042353) #36
Mus	ANCESTRAL SPECIES	6	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010.bb.b #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Shrew mouse	MODERN SPECIES	12	Atmin (MGP_PahariEiJ_G0023201)	Cenpn (MGP_PahariEiJ_G0023200) #7	Cmc2 (MGP_PahariEiJ_G0023199)	Cdyl2 (MGP_PahariEiJ_G0023198) #9	Dynlrb2 (MGP_PahariEiJ_G0023197) #10	Maf (MGP_PahariEiJ_G0023196) #11	Wwox (MGP_PahariEiJ_G0023195) #13	Clec3a (MGP_PahariEiJ_G0023194) #14	Vat1l (MGP_PahariEiJ_G0023193) #15	MGP_PahariEiJ_G0023192 #16	Adamts18 (MGP_PahariEiJ_G0023191) #17	Syce1l (MGP_PahariEiJ_G0023190) #18	Mon1b (MGP_PahariEiJ_G0023189) #19	Cntnap4 (MGP_PahariEiJ_G0023188) #20	Terf2ip (MGP_PahariEiJ_G0023187) #21	Kars (MGP_PahariEiJ_G0023186) #22	Adat1 (MGP_PahariEiJ_G0023185) #23	Gabarapl2 (MGP_PahariEiJ_G0023184) #24	Tmem231 (MGP_PahariEiJ_G0023183) #25	Chst5 (MGP_PahariEiJ_G0023182) #26	Tmem170 (MGP_PahariEiJ_G0023181) #27	Cfdp1 (MGP_PahariEiJ_G0023180) #28	Bcar1 (MGP_PahariEiJ_G0023179) #29	Zfp1 (MGP_PahariEiJ_G0023178) #31	Ldhd (MGP_PahariEiJ_G0023177) #32	Znrf1 (MGP_PahariEiJ_G0023176) #33	Wdr59 (MGP_PahariEiJ_G0023175) #34	Fa2h (MGP_PahariEiJ_G0023174) #35	Mlkl (MGP_PahariEiJ_G0023173) #36	Rfwd3 (MGP_PahariEiJ_G0023172) #37	Glg1 (MGP_PahariEiJ_G0023171)
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010.bb.b #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Ryukyu mouse	MODERN SPECIES	17	Atmin (MGP_CAROLIEiJ_G0031603)	Cenpn (MGP_CAROLIEiJ_G0031602) #7	Cmc2 (MGP_CAROLIEiJ_G0031601)	Cdyl2 (MGP_CAROLIEiJ_G0031600) #9	Dynlrb2 (MGP_CAROLIEiJ_G0031599) #10	Maf (MGP_CAROLIEiJ_G0031598) #11	Wwox (MGP_CAROLIEiJ_G0031597) #13	Clec3a (MGP_CAROLIEiJ_G0031596) #14	Vat1l (MGP_CAROLIEiJ_G0031595) #15	Nudt7 (MGP_CAROLIEiJ_G0031594) #16	Adamts18 (MGP_CAROLIEiJ_G0031593) #17	Syce1l (MGP_CAROLIEiJ_G0031592) #18	Mon1b (MGP_CAROLIEiJ_G0031591) #19	Cntnap4 (MGP_CAROLIEiJ_G0031590) #20	Terf2ip (MGP_CAROLIEiJ_G0031589) #21	Kars (MGP_CAROLIEiJ_G0031588) #22	Adat1 (MGP_CAROLIEiJ_G0031587) #23	Gabarapl2 (MGP_CAROLIEiJ_G0031586) #24	Tmem231 (MGP_CAROLIEiJ_G0031585) #25	Chst5 (MGP_CAROLIEiJ_G0031584) #26	Tmem170 (MGP_CAROLIEiJ_G0031583) #27	Cfdp1 (MGP_CAROLIEiJ_G0031582) #28	Bcar1 (MGP_CAROLIEiJ_G0031581) #29	Ctrb1 (MGP_CAROLIEiJ_G0031580) #30	Zfp1 (MGP_CAROLIEiJ_G0031579) #31	Ldhd (MGP_CAROLIEiJ_G0031578) #32	Znrf1 (MGP_CAROLIEiJ_G0031577) #33	Wdr59 (MGP_CAROLIEiJ_G0031576) #34	Fa2h (MGP_CAROLIEiJ_G0031575) #35	MGP_CAROLIEiJ_G0031574	Rfwd3 (MGP_CAROLIEiJ_G0031573) #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010.bb.b.a #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010.bb.b.a #24	ENSGT00390000015366 #25	ENSGT00940000162986.q.a #26	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
spretus	MODERN SPECIES	17	Atmin (MGP_SPRETEiJ_G0032721)	Cenpn (MGP_SPRETEiJ_G0032720) #7	Cmc2 (MGP_SPRETEiJ_G0032719)	Cdyl2 (MGP_SPRETEiJ_G0032718) #9	Dynlrb2 (MGP_SPRETEiJ_G0032717) #10	MGP_SPRETEiJ_G0032716 #11	Wwox (MGP_SPRETEiJ_G0032715) #13	Clec3a (MGP_SPRETEiJ_G0032714) #14	Vat1l (MGP_SPRETEiJ_G0032713) #15	Nudt7 (MGP_SPRETEiJ_G0032712) #16	Adamts18 (MGP_SPRETEiJ_G0032711) #17	Syce1l (MGP_SPRETEiJ_G0032710) #18	Mon1b (MGP_SPRETEiJ_G0032709) #19	Cntnap4 (MGP_SPRETEiJ_G0032708) #20	Terf2ip (MGP_SPRETEiJ_G0032707) #21	Kars (MGP_SPRETEiJ_G0032706) #22	Adat1 (MGP_SPRETEiJ_G0032705) #23	MGP_SPRETEiJ_G0032704 #24	Tmem231 (MGP_SPRETEiJ_G0032703) #25	Chst5 (MGP_SPRETEiJ_G0032702) #26	Tmem170 (MGP_SPRETEiJ_G0032701) #27	Cfdp1 (MGP_SPRETEiJ_G0032700) #28	Bcar1 (MGP_SPRETEiJ_G0032699) #29	Ctrb1 (MGP_SPRETEiJ_G0032698) #30	Zfp1 (MGP_SPRETEiJ_G0032697) #31	Ldhd (MGP_SPRETEiJ_G0032696) #32	Znrf1 (MGP_SPRETEiJ_G0032695) #33	Wdr59 (MGP_SPRETEiJ_G0032694) #34	Fa2h (MGP_SPRETEiJ_G0032693) #35	Mlkl (MGP_SPRETEiJ_G0032692) #36	Rfwd3 (MGP_SPRETEiJ_G0032691) #37
Steppe mouse	MODERN SPECIES	3379	Cdyl2 (ENSMSIG00000020716) #9	Dynlrb2 (ENSMSIG00000020660) #10	ENSMSIG00000020647	Wwox (ENSMSIG00000020449) #13	Clec3a (ENSMSIG00000020422) #14	Vat1l (ENSMSIG00000020396) #15	Nudt7 (ENSMSIG00000020337) #16	ENSMSIG00000020331	Adamts18 (ENSMSIG00000020295) #17	Syce1l (ENSMSIG00000020198) #18	Mon1b (ENSMSIG00000020187) #19	ENSMSIG00000020146	Cntnap4 (ENSMSIG00000020072) #20	ENSMSIG00000020046	Terf2ip (ENSMSIG00000020038) #21	Kars (ENSMSIG00000019991) #22	ENSMSIG00000019970 #23	ENSMSIG00000019962 #24	Tmem231 (ENSMSIG00000019947) #25	Chst5 (ENSMSIG00000019936) #26	ENSMSIG00000019918 #27	Cfdp1 (ENSMSIG00000019907) #28	Bcar1 (ENSMSIG00000019865) #29	Ctrb1 (ENSMSIG00000019850) #30	Zfp1 (ENSMSIG00000019836) #31	Ldhd (ENSMSIG00000019830) #32	Znrf1 (ENSMSIG00000019759) #33	Wdr59 (ENSMSIG00000019649) #34	Fa2h (ENSMSIG00000019619) #35	Mlkl (ENSMSIG00000019582) #36	ENSMSIG00000019575
Mouse	MODERN SPECIES	17	Atmin (ENSMUSG00000047388)	Cenpn (ENSMUSG00000031756) #7	Cmc2 (ENSMUSG00000014633)	Cdyl2 (ENSMUSG00000031758) #9	Dynlrb2 (ENSMUSG00000034467) #10	Maf (ENSMUSG00000055435) #11	Wwox (ENSMUSG00000004637) #13	Clec3a (ENSMUSG00000008874) #14	Vat1l (ENSMUSG00000046844) #15	Nudt7 (ENSMUSG00000031767) #16	Adamts18 (ENSMUSG00000053399) #17	Syce1l (ENSMUSG00000033409) #18	Mon1b (ENSMUSG00000078908) #19	Cntnap4 (ENSMUSG00000031772) #20	Terf2ip (ENSMUSG00000033430) #21	Kars (ENSMUSG00000031948) #22	Adat1 (ENSMUSG00000031949) #23	Gabarapl2 (ENSMUSG00000031950) #24	Tmem231 (ENSMUSG00000031951) #25	Chst5 (ENSMUSG00000031952) #26	Tmem170 (ENSMUSG00000031953) #27	Cfdp1 (ENSMUSG00000031954) #28	Bcar1 (ENSMUSG00000031955) #29	Ctrb1 (ENSMUSG00000031957) #30	Zfp1 (ENSMUSG00000055835) #31	Ldhd (ENSMUSG00000031958) #32	Znrf1 (ENSMUSG00000033545) #33	Wdr59 (ENSMUSG00000031959) #34	Fa2h (ENSMUSG00000033579) #35	Mlkl (ENSMUSG00000012519) #36	Rfwd3 (ENSMUSG00000033596) #37
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1825												Adamts18 (ENSNGAG00000001586) #17	Mon1b (ENSNGAG00000009580) #19	Cntnap4 (ENSNGAG00000001769) #20	Terf2ip (ENSNGAG00000014041) #21	ENSNGAG00000018820 #22	Adat1 (ENSNGAG00000019449) #23	Gabarapl2 (ENSNGAG00000017293) #24	Tmem231 (ENSNGAG00000001178) #25	Chst5 (ENSNGAG00000000886) #26	Tmem170 (ENSNGAG00000007423) #27	Cfdp1 (ENSNGAG00000018342) #28	Bcar1 (ENSNGAG00000004088) #29	Ctrb1 (ENSNGAG00000010514) #30	Zfp1 (ENSNGAG00000016319) #31	Ldhd (ENSNGAG00000014589) #32	Znrf1 (ENSNGAG00000017540) #33	Wdr59 (ENSNGAG00000012451) #34	Fa2h (ENSNGAG00000017992) #35	Mlkl (ENSNGAG00000018636) #36	Rfwd3 (ENSNGAG00000000472) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	757	Psmd2 (ENSNGAG00000010621)	ENSNGAG00000020539	ENSNGAG00000022175	Fam131a (ENSNGAG00000019596)	Clcn2 (ENSNGAG00000021473)	ENSNGAG00000023997	Thpo (ENSNGAG00000024253)	Chrd (ENSNGAG00000002968)	Ephb3 (ENSNGAG00000023003)	Vps8 (ENSNGAG00000010229)	2510009E07Rik (ENSNGAG00000003496)	Ehhadh (ENSNGAG00000022028)	Map3k13 (ENSNGAG00000017162)	ENSNGAG00000016716	Liph (ENSNGAG00000001457)	ENSNGAG00000022944 #22	Senp2 (ENSNGAG00000019966)	ENSNGAG00000022590	Igf2bp2 (ENSNGAG00000012680)
Lesser Egyptian jerboa	MODERN SPECIES	71	Dynlrb2 (ENSJJAG00000016140) #10	Maf (ENSJJAG00000014133) #11	ENSJJAG00000012328 #13	ENSJJAG00000009899	Clec3a (ENSJJAG00000014430) #14	Vat1l (ENSJJAG00000023382) #15	ENSJJAG00000020220	Nudt7 (ENSJJAG00000022849) #16	Adamts18 (ENSJJAG00000023870) #17	Mon1b (ENSJJAG00000020620) #19	Cntnap4 (ENSJJAG00000018976) #20	ENSJJAG00000020983	ENSJJAG00000011183	ENSJJAG00000010574	Terf2ip (ENSJJAG00000021994) #21	Kars (ENSJJAG00000020406) #22	ENSJJAG00000015819	Gabarapl2 (ENSJJAG00000015443) #24	Tmem231 (ENSJJAG00000017433) #25	ENSJJAG00000020308	ENSJJAG00000022826 #27	Cfdp1 (ENSJJAG00000018539) #28	Bcar1 (ENSJJAG00000024316) #29	Zfp1 (ENSJJAG00000019878) #31	Ldhd (ENSJJAG00000015365) #32	Znrf1 (ENSJJAG00000000892) #33	Wdr59 (ENSJJAG00000018356) #34
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	320	Hecw2 (ENSDORG00000014759)	Stk17b (ENSDORG00000029601)	ENSDORG00000024535	Slc39a10 (ENSDORG00000012466)	ENSDORG00000023275	ENSDORG00000023474	Amer2 (ENSDORG00000027428)	ENSDORG00000013283	ENSDORG00000029901	ENSDORG00000027809	C1qtnf9 (ENSDORG00000027816)	Mipep (ENSDORG00000009787)	Tnfrsf19 (ENSDORG00000015611)	Sacs (ENSDORG00000027871)	Sgcg (ENSDORG00000005659)	ENSDORG00000024214 #22	Fgf9 (ENSDORG00000027347)	Micu2 (ENSDORG00000002228)	Zdhhc20 (ENSDORG00000003892)	Mrpl57 (ENSDORG00000028118)	Ska3 (ENSDORG00000005433)	ENSDORG00000029994	Lats2 (ENSDORG00000011231)	Xpo4 (ENSDORG00000012712)	ENSDORG00000023193	ENSDORG00000008228	ENSDORG00000027898	Atp12a (ENSDORG00000001519)	Cenpj (ENSDORG00000016674)	ENSDORG00000025901	Parp4 (ENSDORG00000029090)
Kangaroo rat	MODERN SPECIES	337	1700030J22Rik (ENSDORG00000007829)	Atmin (ENSDORG00000029539)	Cenpn (ENSDORG00000000402) #7	ENSDORG00000010432 #8	Cdyl2 (ENSDORG00000011301) #9	Dynlrb2 (ENSDORG00000000891) #10	Maf (ENSDORG00000028766) #11	Wwox (ENSDORG00000014966) #13	Clec3a (ENSDORG00000014965) #14	Vat1l (ENSDORG00000005299) #15	Nudt7 (ENSDORG00000011038) #16	Adamts18 (ENSDORG00000003587) #17	Mon1b (ENSDORG00000003584) #19	Cntnap4 (ENSDORG00000010466) #20	Terf2ip (ENSDORG00000004783) #21	Kars (ENSDORG00000004780) #22	Adat1 (ENSDORG00000004779) #23	Gabarapl2 (ENSDORG00000029545) #24	Tmem231 (ENSDORG00000012411) #25	ENSDORG00000026949	Tmem170 (ENSDORG00000023426) #27	Cfdp1 (ENSDORG00000006329) #28	Bcar1 (ENSDORG00000006327) #29	Ctrb1 (ENSDORG00000006317) #30	Zfp1 (ENSDORG00000011934) #31	Ldhd (ENSDORG00000011933) #32	Znrf1 (ENSDORG00000011928) #33	Wdr59 (ENSDORG00000004163) #34	Fa2h (ENSDORG00000023167) #35	Rfwd3 (ENSDORG00000007727) #37	Glg1 (ENSDORG00000007724)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000154420.B	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000154420.B	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000154420.B	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00390000013091	ENSGT00390000004738.c #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36	ENSGT00390000008931 #37
Arctic ground squirrel	MODERN SPECIES	411														CNTNAP4 (ENSUPAG00010003823) #20	TERF2IP (ENSUPAG00010003814) #21	KARS1 (ENSUPAG00010003754) #22	ADAT1 (ENSUPAG00010003738) #23	GABARAPL2 (ENSUPAG00010003730) #24	P2RY2 (ENSUPAG00010003696)	P2RY6 (ENSUPAG00010003687)	ARHGEF17 (ENSUPAG00010003622)	RELT (ENSUPAG00010003600)	ENSUPAG00010003448	PLEKHB1 (ENSUPAG00010003208)	RAB6A (ENSUPAG00010003108)
Squirrel	MODERN SPECIES	75	C16orf46 (ENSSTOG00000007385)	ENSSTOG00000007345 #7	ENSSTOG00000030854 #7	CMC2 (ENSSTOG00000033130) #8	CDYL2 (ENSSTOG00000013005) #9	DYNLRB2 (ENSSTOG00000023418) #10	WWOX (ENSSTOG00000028005) #13	CLEC3A (ENSSTOG00000005493) #14	VAT1L (ENSSTOG00000005476) #15	NUDT7 (ENSSTOG00000028240) #16	ADAMTS18 (ENSSTOG00000012392) #17	ENSSTOG00000026850 #18	MON1B (ENSSTOG00000027070) #19	CNTNAP4 (ENSSTOG00000000938) #20	TERF2IP (ENSSTOG00000023669) #21	KARS1 (ENSSTOG00000004205) #22	ADAT1 (ENSSTOG00000022627) #23	GABARAPL2 (ENSSTOG00000020123) #24	TMEM231 (ENSSTOG00000013791) #25	TMEM170A (ENSSTOG00000004138) #27	CFDP1 (ENSSTOG00000004124) #28	BCAR1 (ENSSTOG00000004102) #29	ENSSTOG00000004080 #30	ZFP1 (ENSSTOG00000022317) #31	LDHD (ENSSTOG00000006254) #32	ZNRF1 (ENSSTOG00000026020) #33	WDR59 (ENSSTOG00000010240) #34	FA2H (ENSSTOG00000010231) #35	MLKL (ENSSTOG00000010220) #36	RFWD3 (ENSSTOG00000010196) #37	GLG1 (ENSSTOG00000010174)
Alpin marmot	MODERN SPECIES	43	ENSMMMG00000012408 #7	ENSMMMG00000012414	CMC2 (ENSMMMG00000012416) #8	CDYL2 (ENSMMMG00000012427) #9	DYNLRB2 (ENSMMMG00000012433) #10	ENSMMMG00000012440 #11	WWOX (ENSMMMG00000012447) #13	CLEC3A (ENSMMMG00000012467) #14	VAT1L (ENSMMMG00000012469) #15	NUDT7 (ENSMMMG00000012478) #16	ADAMTS18 (ENSMMMG00000012500) #17	MON1B (ENSMMMG00000012559) #19	ENSMMMG00000012568	CNTNAP4 (ENSMMMG00000012584) #20	TERF2IP (ENSMMMG00000012629) #21	KARS1 (ENSMMMG00000012632) #22	ADAT1 (ENSMMMG00000012661) #23	GABARAPL2 (ENSMMMG00000012698) #24	TMEM231 (ENSMMMG00000012707) #25	ENSMMMG00000012719	ENSMMMG00000012722 #27	CFDP1 (ENSMMMG00000012727) #28	BCAR1 (ENSMMMG00000012730) #29	ENSMMMG00000012747 #30	ENSMMMG00000012754 #30	ZFP1 (ENSMMMG00000012774) #31	LDHD (ENSMMMG00000012779) #32	ZNRF1 (ENSMMMG00000012822) #33	WDR59 (ENSMMMG00000012840) #34	FA2H (ENSMMMG00000012925) #35	MLKL (ENSMMMG00000012932) #36
Eurasian red squirrel	MODERN SPECIES	8	DYNLRB2 (ENSSVLG00005015349) #10	ENSSVLG00005015446 #11	WWOX (ENSSVLG00005015526) #13	ENSSVLG00005015573	CLEC3A (ENSSVLG00005015615) #14	VAT1L (ENSSVLG00005015671) #15	NUDT7 (ENSSVLG00005015783) #16	ADAMTS18 (ENSSVLG00005015898) #17	ENSSVLG00005016092	SYCE1L (ENSSVLG00005016146) #18	MON1B (ENSSVLG00005016284) #19	CNTNAP4 (ENSSVLG00005016453) #20	ENSSVLG00005017621	DUXB (ENSSVLG00005017671)	TERF2IP (ENSSVLG00005017752) #21	KARS1 (ENSSVLG00005017790) #22	ADAT1 (ENSSVLG00005017872) #23	GABARAPL2 (ENSSVLG00005017970) #24	TMEM231 (ENSSVLG00005018059) #25	ENSSVLG00005018139	TMEM170A (ENSSVLG00005018166) #27	CFDP1 (ENSSVLG00005018315) #28	BCAR1 (ENSSVLG00005018450) #29	ENSSVLG00005018505 #30	ZFP1 (ENSSVLG00005018583) #31	LDHD (ENSSVLG00005018665) #32	ZNRF1 (ENSSVLG00005018778) #33	WDR59 (ENSSVLG00005018837) #34	FA2H (ENSSVLG00005018910) #35	MLKL (ENSSVLG00005018999) #36	RFWD3 (ENSSVLG00005019092) #37
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351.d #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000005569.x.b	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r.f #30	ENSGT00940000153216.a.a.c.b.r.e #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	5	TMEM60 (ENSHGLG00000010918)	ENSHGLG00000003108	ENSHGLG00000038970	ENSHGLG00000043492	ENSHGLG00000041214	ENSHGLG00000035610	GNAT3 (ENSHGLG00000005477)	CD36 (ENSHGLG00000008538)	SEMA3C (ENSHGLG00000017349)	ENSHGLG00000033747	HGF (ENSHGLG00000013433)	ENSHGLG00000009396	ENSHGLG00000046779	SEMA3E (ENSHGLG00000015250)	SEMA3A (ENSHGLG00000015617)	ENSHGLG00000015235 #22	GRM3 (ENSHGLG00000007178)	ENSHGLG00000009183	ENSHGLG00000035286
Naked mole-rat female	MODERN SPECIES	26	WWOX (ENSHGLG00000013627) #13	CLEC3A (ENSHGLG00000042627) #14	VAT1L (ENSHGLG00000010671) #15	NUDT7 (ENSHGLG00000011902) #16	ADAMTS18 (ENSHGLG00000012658) #17	ENSHGLG00000042594	MON1B (ENSHGLG00000011826) #19	CNTNAP4 (ENSHGLG00000014557) #20	ENSHGLG00000037762	ENSHGLG00000048984	ENSHGLG00000050555	ENSHGLG00000018313	ENSHGLG00000036739	ENSHGLG00000048278	TERF2IP (ENSHGLG00000010045) #21	ENSHGLG00000011898 #22	ADAT1 (ENSHGLG00000037290) #23	GABARAPL2 (ENSHGLG00000009724) #24	ENSHGLG00000010018	TMEM231 (ENSHGLG00000010715) #25	ENSHGLG00000011601	TMEM170A (ENSHGLG00000011816) #27	CFDP1 (ENSHGLG00000010445) #28	BCAR1 (ENSHGLG00000017063) #29	ENSHGLG00000018037 #30	ENSHGLG00000016341 #30	ZFP1 (ENSHGLG00000032691) #31	LDHD (ENSHGLG00000016453) #32	ZNRF1 (ENSHGLG00000014332) #33	WDR59 (ENSHGLG00000010982) #34	FA2H (ENSHGLG00000011447) #35
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351.d #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000005569.x.b	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r.f #30	ENSGT00940000153216.a.a.c.b.r.e #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35
Guinea pig	MODERN SPECIES	22													CNTNAP4 (ENSCPOG00000006637) #20	ENSCPOG00000024860	TERF2IP (ENSCPOG00000019874) #21	KARS1 (ENSCPOG00000012036) #22	ADAT1 (ENSCPOG00000012030) #23	GABARAPL2 (ENSCPOG00000036838) #24	ENSCPOG00000027135	TMEM231 (ENSCPOG00000039845) #25	ENSCPOG00000027395	TMEM170A (ENSCPOG00000035489) #27	CFDP1 (ENSCPOG00000000695) #28	BCAR1 (ENSCPOG00000014590) #29	ENSCPOG00000014582 #30	ZFP1 (ENSCPOG00000000634) #31	LDHD (ENSCPOG00000010200) #32	ZNRF1 (ENSCPOG00000010190) #33	WDR59 (ENSCPOG00000010169) #34	FA2H (ENSCPOG00000015264) #35	MLKL (ENSCPOG00000008080) #36
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00390000013091	ENSGT00390000004738 #7	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000157674 #20	ENSGT00390000005351.d #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000005569.x.b	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.r.f #30	ENSGT00940000153216.a.a.c.b.r.e #30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35
Long-tailed chinchilla	MODERN SPECIES	191													CNTNAP4 (ENSCLAG00000003909) #20	ENSCLAG00000007032	TERF2IP (ENSCLAG00000011045) #21	KARS1 (ENSCLAG00000007905) #22	ADAT1 (ENSCLAG00000006384) #23	GABARAPL2 (ENSCLAG00000007159) #24	ENSCLAG00000007446	TMEM231 (ENSCLAG00000008411) #25	ENSCLAG00000004189	TMEM170A (ENSCLAG00000004242) #27	CFDP1 (ENSCLAG00000004524) #28	ENSCLAG00000004803	BCAR1 (ENSCLAG00000005229) #29	ENSCLAG00000003162 #30	ENSCLAG00000003968 #30	ZFP1 (ENSCLAG00000004223) #31	LDHD (ENSCLAG00000006210) #32	ZNRF1 (ENSCLAG00000006646) #33	WDR59 (ENSCLAG00000008773) #34
Degu	DUPLICATION
Degu	MODERN SPECIES	81	CSNK1G3 (ENSODEG00000007615)	ENSODEG00000006461	CEP120 (ENSODEG00000007309)	PRDM6 (ENSODEG00000006943)	PPIC (ENSODEG00000006665)	SNX24 (ENSODEG00000006952)	ENSODEG00000009871	ENSODEG00000010513	SNCAIP (ENSODEG00000008243)	ENSODEG00000007498	ENSODEG00000007776	LOX (ENSODEG00000008479)	SRFBP1 (ENSODEG00000007258)	ENSODEG00000006346	ENSODEG00000005979	ENSODEG00000009464 #22	ENSODEG00000006891
Degu	MODERN SPECIES	52	CENPN (ENSODEG00000012974) #7	CMC2 (ENSODEG00000014155) #8	ENSODEG00000019996	CDYL2 (ENSODEG00000012881) #9	DYNLRB2 (ENSODEG00000012819) #10	MAF (ENSODEG00000014515) #11	WWOX (ENSODEG00000014111) #13	CLEC3A (ENSODEG00000015370) #14	VAT1L (ENSODEG00000013630) #15	NUDT7 (ENSODEG00000012841) #16	ADAMTS18 (ENSODEG00000013530) #17	ENSODEG00000013470 #18	MON1B (ENSODEG00000013202) #19	CNTNAP4 (ENSODEG00000014247) #20	TERF2IP (ENSODEG00000013617) #21	ENSODEG00000013099 #22	ADAT1 (ENSODEG00000014036) #23	ENSODEG00000013711 #24	TMEM231 (ENSODEG00000013472) #25	ENSODEG00000020547	TMEM170A (ENSODEG00000015044) #27	ENSODEG00000013385 #28	BCAR1 (ENSODEG00000014208) #29	ENSODEG00000013237 #30	ENSODEG00000014533	ZFP1 (ENSODEG00000014404) #31	LDHD (ENSODEG00000013403) #32	ENSODEG00000013782 #33	WDR59 (ENSODEG00000014115) #34	FA2H (ENSODEG00000015464) #35	ENSODEG00000013539
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00390000016908 #8	ENSGT00940000159646 #9	ENSGT00390000011067.B #10	ENSGT00940000161531 #11	ENSGT00940000157389 #13	ENSGT00950000183186.B.a #14	ENSGT00940000159184 #15	ENSGT00940000159631 #16	ENSGT00940000157553 #17	ENSGT00390000017352.d #18	ENSGT00390000006665.b #19	ENSGT00940000165693	ENSGT00940000157674 #20	ENSGT00940000165352	ENSGT00390000005351 #21	ENSGT01030000234618.A #22	ENSGT00940000157942 #23	ENSGT00940000155010 #24	ENSGT00390000015366 #25	ENSGT00940000162788	ENSGT00940000159189 #27	ENSGT00390000018141 #28	ENSGT00950000183008.a.b #29	ENSGT00940000153216.a.a.c.b.q.b.b ##30	ENSGT00940000153216.a.a.c.b.q.b.a ##30	ENSGT00940000161694 #31	ENSGT00940000158705 #32	ENSGT00940000159278 #33	ENSGT00940000157600 #34	ENSGT00390000002142 #35	ENSGT00390000016453 #36
Rabbit	MODERN SPECIES	16	CDYL2 (ENSOCUG00000008581) #9	DYNLRB2 (ENSOCUG00000008578) #10	ENSOCUG00000035588	WWOX (ENSOCUG00000002504) #13	CLEC3A (ENSOCUG00000001866) #14	VAT1L (ENSOCUG00000001863) #15	NUDT7 (ENSOCUG00000001859) #16	ADAMTS18 (ENSOCUG00000014350) #17	MON1B (ENSOCUG00000024409) #19	ENSOCUG00000029408	CNTNAP4 (ENSOCUG00000002907) #20	ENSOCUG00000026220	ENSOCUG00000030510	ENSOCUG00000027437	TERF2IP (ENSOCUG00000015563) #21	KARS1 (ENSOCUG00000015553) #22	ADAT1 (ENSOCUG00000015540) #23	GABARAPL2 (ENSOCUG00000016600) #24	TMEM231 (ENSOCUG00000008718) #25	TMEM170A (ENSOCUG00000009283) #27	CFDP1 (ENSOCUG00000006689) #28	BCAR1 (ENSOCUG00000015992) #29	ENSOCUG00000011106 ##30	ENSOCUG00000024901 ##30	ENSOCUG00000012429	ZFP1 (ENSOCUG00000001924) #31	LDHD (ENSOCUG00000001913) #32	ZNRF1 (ENSOCUG00000023442) #33	WDR59 (ENSOCUG00000011087) #34	FA2H (ENSOCUG00000030940) #35	RFWD3 (ENSOCUG00000009152) #37
Pika	MODERN SPECIES	1343															TERF2IP (ENSOPRG00000012569) #21	KARS1 (ENSOPRG00000012544) #22	ADAT1 (ENSOPRG00000012530) #23	GABARAPL2 (ENSOPRG00000012524) #24	TMEM231 (ENSOPRG00000012518) #25	ENSOPRG00000012504