Theria	ANCESTRAL SPECIES	8	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Eutheria	ANCESTRAL SPECIES	3	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Glires	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Mus	ANCESTRAL SPECIES	1	ENSGT00940000153571.b	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Mus_A	ANCESTRAL SPECIES		ENSGT00940000153571.b	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000153571.b	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Mus_C	ANCESTRAL SPECIES		ENSGT00940000153571.b	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Steppe mouse	MODERN SPECIES	33								ENSMSIG00000014200 #14	ENSMSIG00000014230 #15	Eif3m (ENSMSIG00000014235) #16	ENSMSIG00000014312 #17	ENSMSIG00000014324 #18	Wt1 (ENSMSIG00000014372) #19	Them7 (ENSMSIG00000014482) #20	ENSMSIG00000014497 #21	Pax6 (ENSMSIG00000014511) #22	Elp4 (ENSMSIG00000014816) #23	Immp1l (ENSMSIG00000014838) #24	ENSMSIG00000014856 #25	ENSMSIG00000014903 #26	ENSMSIG00000015003 #27	Mpped2 (ENSMSIG00000015026) #28	Arl14ep (ENSMSIG00000015063) #29	ENSMSIG00000015115 #30	Fshb (ENSMSIG00000015133) #31
spretus	MODERN SPECIES	11	A930018P22Rik (MGP_SPRETEiJ_G0024935)	D430041D05Rik (MGP_SPRETEiJ_G0024936)	Hipk3 (MGP_SPRETEiJ_G0024937)	MGP_SPRETEiJ_G0024938	Cstf3 (MGP_SPRETEiJ_G0024939)	Tcp11l1 (MGP_SPRETEiJ_G0024940)	Pin1rt1 (MGP_SPRETEiJ_G0024941)	Depdc7 (MGP_SPRETEiJ_G0024942)	Qser1 (MGP_SPRETEiJ_G0024943)	Prrg4 (MGP_SPRETEiJ_G0024944)	Ccdc73 (MGP_SPRETEiJ_G0024945) #14	Eif3m (MGP_SPRETEiJ_G0024946) #16	Wt1 (MGP_SPRETEiJ_G0024947) #19	Them7 (MGP_SPRETEiJ_G0024948) #20	Rcn1 (MGP_SPRETEiJ_G0024949) #21	Pax6 (MGP_SPRETEiJ_G0024950) #22	Elp4 (MGP_SPRETEiJ_G0024951) #23	Immp1l (MGP_SPRETEiJ_G0024952) #24	Dnajc24 (MGP_SPRETEiJ_G0024953) #25	Mpped2 (MGP_SPRETEiJ_G0024954) #28	Arl14ep (MGP_SPRETEiJ_G0024955) #29	Fshb (MGP_SPRETEiJ_G0024956) #31	Kcna4 (MGP_SPRETEiJ_G0024957)	Trav4-2 (MGP_SPRETEiJ_G0002396)	Mettl15 (MGP_SPRETEiJ_G0024958)	Kif18a (MGP_SPRETEiJ_G0024959)	Bdnf (MGP_SPRETEiJ_G0024960)	Lin7c (MGP_SPRETEiJ_G0024961)	Lgr4 (MGP_SPRETEiJ_G0024962)	Ccdc34 (MGP_SPRETEiJ_G0024963)	MGP_SPRETEiJ_G0024964
Mouse	MODERN SPECIES	11	Cd59a (ENSMUSG00000032679)	A930018P22Rik (ENSMUSG00000032671)	D430041D05Rik (ENSMUSG00000068373)	Hipk3 (ENSMUSG00000027177)	Cstf3 (ENSMUSG00000027176)	Tcp11l1 (ENSMUSG00000027175)	Pin1rt1 (ENSMUSG00000074997)	Depdc7 (ENSMUSG00000027173)	Qser1 (ENSMUSG00000074994)	Prrg4 (ENSMUSG00000027171)	Ccdc73 (ENSMUSG00000045106) #14	Eif3m (ENSMUSG00000027170) #16	Wt1 (ENSMUSG00000016458) #19	Them7 (ENSMUSG00000055312) #20	Rcn1 (ENSMUSG00000005973) #21	Pax6 (ENSMUSG00000027168) #22	Elp4 (ENSMUSG00000027167) #23	Immp1l (ENSMUSG00000042670) #24	Dnajc24 (ENSMUSG00000027166) #25	Mpped2 (ENSMUSG00000016386) #28	Arl14ep (ENSMUSG00000027122) #29	Fshb (ENSMUSG00000027120) #31	Kcna4 (ENSMUSG00000042604)	Mettl15 (ENSMUSG00000057234)	Kif18a (ENSMUSG00000027115)	Bdnf (ENSMUSG00000048482)	Lin7c (ENSMUSG00000027162)	Lgr4 (ENSMUSG00000050199)	Ccdc34 (ENSMUSG00000027160)	Bbox1 (ENSMUSG00000041660)	Fibin (ENSMUSG00000074971)
Ryukyu mouse	MODERN SPECIES	11	Fbxo3 (MGP_CAROLIEiJ_G0024022)	A930018P22Rik (MGP_CAROLIEiJ_G0024023)	MGP_CAROLIEiJ_G0024024	Hipk3 (MGP_CAROLIEiJ_G0024025)	Cstf3 (MGP_CAROLIEiJ_G0024026)	Tcp11l1 (MGP_CAROLIEiJ_G0024027)	Pin1rt1 (MGP_CAROLIEiJ_G0024028)	Depdc7 (MGP_CAROLIEiJ_G0024029)	Qser1 (MGP_CAROLIEiJ_G0024030)	Prrg4 (MGP_CAROLIEiJ_G0024031)	Ccdc73 (MGP_CAROLIEiJ_G0024032) #14	Eif3m (MGP_CAROLIEiJ_G0024033) #16	Wt1 (MGP_CAROLIEiJ_G0024034) #19	Them7 (MGP_CAROLIEiJ_G0024035) #20	Rcn1 (MGP_CAROLIEiJ_G0024036) #21	Pax6 (MGP_CAROLIEiJ_G0024037) #22	Elp4 (MGP_CAROLIEiJ_G0024038) #23	Immp1l (MGP_CAROLIEiJ_G0024039) #24	Dnajc24 (MGP_CAROLIEiJ_G0024040) #25	Mpped2 (MGP_CAROLIEiJ_G0024041) #28	Arl14ep (MGP_CAROLIEiJ_G0024042) #29	Fshb (MGP_CAROLIEiJ_G0024043) #31	Kcna4 (MGP_CAROLIEiJ_G0024044)	Mettl15 (MGP_CAROLIEiJ_G0024045)	Kif18a (MGP_CAROLIEiJ_G0024046)	Bdnf (MGP_CAROLIEiJ_G0024047)	Lin7c (MGP_CAROLIEiJ_G0024048)	Lgr4 (MGP_CAROLIEiJ_G0024049)	Ccdc34 (MGP_CAROLIEiJ_G0024050)	Bbox1 (MGP_CAROLIEiJ_G0024051)	Fibin (MGP_CAROLIEiJ_G0024052)
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0025460	A930018P22Rik (MGP_PahariEiJ_G0025461)	D430041D05Rik (MGP_PahariEiJ_G0025462)	Hipk3 (MGP_PahariEiJ_G0025463)	Cstf3 (MGP_PahariEiJ_G0025464)	Tcp11l1 (MGP_PahariEiJ_G0025465)	Pin1rt1 (MGP_PahariEiJ_G0025466)	Depdc7 (MGP_PahariEiJ_G0025467)	Qser1 (MGP_PahariEiJ_G0025468)	Prrg4 (MGP_PahariEiJ_G0025469)	Ccdc73 (MGP_PahariEiJ_G0025470) #14	Eif3m (MGP_PahariEiJ_G0025471) #16	Wt1 (MGP_PahariEiJ_G0025472) #19	Them7 (MGP_PahariEiJ_G0025473) #20	Rcn1 (MGP_PahariEiJ_G0025474) #21	Pax6 (MGP_PahariEiJ_G0025475) #22	Elp4 (MGP_PahariEiJ_G0025476) #23	Immp1l (MGP_PahariEiJ_G0025477) #24	Dnajc24 (MGP_PahariEiJ_G0025478) #25	Mpped2 (MGP_PahariEiJ_G0025479) #28	Arl14ep (MGP_PahariEiJ_G0025480) #29	Fshb (MGP_PahariEiJ_G0025481) #31	Kcna4 (MGP_PahariEiJ_G0025482)	Mettl15 (MGP_PahariEiJ_G0025483)	Kif18a (MGP_PahariEiJ_G0025484)	Bdnf (MGP_PahariEiJ_G0025485)	Lin7c (MGP_PahariEiJ_G0025486)	Lgr4 (MGP_PahariEiJ_G0025487)	Ccdc34 (MGP_PahariEiJ_G0025488)	Bbox1 (MGP_PahariEiJ_G0025489)	Fibin (MGP_PahariEiJ_G0025490)
Rat	MODERN SPECIES	13	RGD1563222 (ENSRNOG00000010963)	LOC100362814 (ENSRNOG00000011132)	Hipk3 (ENSRNOG00000011358)	Cstf3 (ENSRNOG00000012089)	Tcp11l1 (ENSRNOG00000042576)	Depdc7 (ENSRNOG00000012262)	Qser1 (ENSRNOG00000037514)	Prrg4 (ENSRNOG00000022710)	RGD1560017 (ENSRNOG00000029262)	Ccdc73 (ENSRNOG00000022660) #14	Eif3m (ENSRNOG00000012738) #16	ENSRNOG00000067112	Wt1 (ENSRNOG00000013074) #19	LOC691083 (ENSRNOG00000013437) #20	Rcn1 (ENSRNOG00000013452) #21	Pax6 (ENSRNOG00000004410) #22	AABR07053185.1 (ENSRNOG00000004787) #23	LOC108350427 (ENSRNOG00000031694)	Immp1l (ENSRNOG00000004829) #24	Dnajc24 (ENSRNOG00000004842) #25	Dcdc1-ps1 (ENSRNOG00000022178) #26	Mpped2 (ENSRNOG00000004863) #28	Arl14ep (ENSRNOG00000004891) #29	Fshb (ENSRNOG00000004898) #31	Kcna4 (ENSRNOG00000004918)	Mettl15 (ENSRNOG00000066683)	Kif18a (ENSRNOG00000005037)	Bdnf (ENSRNOG00000047466)	Lin7c (ENSRNOG00000062543)	AC135294.1 (ENSRNOG00000053696)	Lgr4 (ENSRNOG00000005715)
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Northern American deer mouse	MODERN SPECIES	17	Fbxo3 (ENSPEMG00000018420)	ENSPEMG00000026456	A930018P22Rik (ENSPEMG00000000170)	D430041D05Rik (ENSPEMG00000020969)	Hipk3 (ENSPEMG00000000900)	Cstf3 (ENSPEMG00000011481)	Tcp11l1 (ENSPEMG00000017123)	Depdc7 (ENSPEMG00000015544)	Qser1 (ENSPEMG00000008956)	Prrg4 (ENSPEMG00000017500)	ENSPEMG00000015426 #14	Eif3m (ENSPEMG00000011786) #16	Wt1 (ENSPEMG00000001292) #19	Them7 (ENSPEMG00000010578) #20	Rcn1 (ENSPEMG00000005747) #21	Pax6 (ENSPEMG00000017076) #22	Elp4 (ENSPEMG00000014413) #23	Immp1l (ENSPEMG00000012294) #24	Dnajc24 (ENSPEMG00000009627) #25	ENSPEMG00000028596	ENSPEMG00000027454	Mpped2 (ENSPEMG00000031263) #28	Arl14ep (ENSPEMG00000002547) #29	Fshb (ENSPEMG00000016453) #31	Kcna4 (ENSPEMG00000000419)	Mettl15 (ENSPEMG00000019783)	Kif18a (ENSPEMG00000019708)	Bdnf (ENSPEMG00000019659)	Lin7c (ENSPEMG00000019637)	Lgr4 (ENSPEMG00000019524)	Ccdc34 (ENSPEMG00000019443)
Prairie vole	MODERN SPECIES	81								Prrg4 (ENSMOCG00000021579)	ENSMOCG00000022602	ENSMOCG00000013836 #14	ENSMOCG00000012509	Eif3m (ENSMOCG00000020753) #16	Wt1 (ENSMOCG00000006225) #19	Them7 (ENSMOCG00000010419) #20	Rcn1 (ENSMOCG00000011897) #21	Pax6 (ENSMOCG00000017625) #22	Elp4 (ENSMOCG00000009942) #23	Immp1l (ENSMOCG00000000239) #24	Dnajc24 (ENSMOCG00000003631) #25	ENSMOCG00000009178	Mpped2 (ENSMOCG00000002797) #28	Arl14ep (ENSMOCG00000016817) #29	Fshb (ENSMOCG00000019709) #31	Kcna4 (ENSMOCG00000010908)	Mettl15 (ENSMOCG00000014905)	Kif18a (ENSMOCG00000019106)	ENSMOCG00000012556	BDNF (ENSMOCG00000000420)	Lin7c (ENSMOCG00000017113)	Lgr4 (ENSMOCG00000016806)	Ccdc34 (ENSMOCG00000007200)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Chinese hamster chok1gshd	MODERN SPECIES	188	Fbxo3 (ENSCGRG00001019997)	ENSCGRG00001019416	A930018P22Rik (ENSCGRG00001018837)	D430041D05Rik (ENSCGRG00001017776)	Hipk3 (ENSCGRG00001016245)	Cstf3 (ENSCGRG00001014773)	Tcp11l1 (ENSCGRG00001000909)	Depdc7 (ENSCGRG00001023950)	Qser1 (ENSCGRG00001023779)	Prrg4 (ENSCGRG00001023311)	ENSCGRG00001023007	EIF3M (ENSCGRG00001022289) #16	Wt1 (ENSCGRG00001005125) #19	Them7 (ENSCGRG00001001622) #20	Rcn1 (ENSCGRG00001000641) #21	Pax6 (ENSCGRG00001020702) #22	Elp4 (ENSCGRG00001019577) #23	Immp1l (ENSCGRG00001019289) #24	Dnajc24 (ENSCGRG00001018592) #25	ENSCGRG00001017684	ENSCGRG00001002326	Mpped2 (ENSCGRG00001024832) #28	Arl14ep (ENSCGRG00001024357) #29	Fshb (ENSCGRG00001023985) #31	ENSCGRG00001023822	Kcna4 (ENSCGRG00001001091)	ENSCGRG00001023034	ENSCGRG00001024320	Mettl15 (ENSCGRG00001023906)	Kif18a (ENSCGRG00001023500)	Bdnf (ENSCGRG00001022995)
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000005850	ENSMAUG00000003722	A930018P22Rik (ENSMAUG00000002950)	D430041D05Rik (ENSMAUG00000010328)	Hipk3 (ENSMAUG00000006713)	Cstf3 (ENSMAUG00000002487)	Tcp11l1 (ENSMAUG00000021339)	Depdc7 (ENSMAUG00000004610)	Qser1 (ENSMAUG00000003616)	Prrg4 (ENSMAUG00000002732)	ENSMAUG00000009063 #14	Eif3m (ENSMAUG00000007848) #16	Wt1 (ENSMAUG00000008036) #19	Them7 (ENSMAUG00000004067) #20	Rcn1 (ENSMAUG00000003393) #21	Pax6 (ENSMAUG00000009509) #22	Elp4 (ENSMAUG00000004673) #23	Dnajc24 (ENSMAUG00000002785) #25	Mpped2 (ENSMAUG00000001559) #28	Fshb (ENSMAUG00000002330) #31	Kcna4 (ENSMAUG00000001742)	Mettl15 (ENSMAUG00000001233)	Kif18a (ENSMAUG00000001496)	Bdnf (ENSMAUG00000021360)	Lin7c (ENSMAUG00000021220)	Lgr4 (ENSMAUG00000008786)	Ccdc34 (ENSMAUG00000007534)	Bbox1 (ENSMAUG00000005985)	Fibin (ENSMAUG00000010806)	Slc5a12 (ENSMAUG00000004871)	Muc15 (ENSMAUG00000003135)
Upper Galilee mountains blind mole rat	MODERN SPECIES	492	ENSNGAG00000023376	A930018P22Rik (ENSNGAG00000021497)	D430041D05Rik (ENSNGAG00000018241)	ENSNGAG00000013144	Cstf3 (ENSNGAG00000010677)	Tcp11l1 (ENSNGAG00000020531)	Depdc7 (ENSNGAG00000021367)	Qser1 (ENSNGAG00000023077)	Prrg4 (ENSNGAG00000021040)	ENSNGAG00000023669	Eif3m (ENSNGAG00000006519) #16	Wt1 (ENSNGAG00000022234) #19	Them7 (ENSNGAG00000017585) #20	Rcn1 (ENSNGAG00000015767) #21	ENSNGAG00000014814	Pax6 (ENSNGAG00000017748) #22	Elp4 (ENSNGAG00000006201) #23	Immp1l (ENSNGAG00000023016) #24	ENSNGAG00000021710 #25	Mpped2 (ENSNGAG00000024208) #28	Arl14ep (ENSNGAG00000023974) #29	Fshb (ENSNGAG00000004419) #31	Kcna4 (ENSNGAG00000023446)	Mettl15 (ENSNGAG00000020743)	Kif18a (ENSNGAG00000024258)	Bdnf (ENSNGAG00000004750)	Lin7c (ENSNGAG00000003441)	ENSNGAG00000021530	ENSNGAG00000021219
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000011063	Ehf (ENSJJAG00000023839)	Elf5 (ENSJJAG00000003357)	Cat (ENSJJAG00000012897)	Abtb2 (ENSJJAG00000014143)	Nat10 (ENSJJAG00000023042)	Lmo2 (ENSJJAG00000020848)	Fbxo3 (ENSJJAG00000022887)	D430041D05Rik (ENSJJAG00000019415)	Hipk3 (ENSJJAG00000000303)	Cstf3 (ENSJJAG00000018430)	Tcp11l1 (ENSJJAG00000002396)	Ccdc73 (ENSJJAG00000021731) #14	Eif3m (ENSJJAG00000011546) #16	ENSJJAG00000016942	Pax6 (ENSJJAG00000011854) #22	Elp4 (ENSJJAG00000020242) #23	Immp1l (ENSJJAG00000022649) #24	ENSJJAG00000023854 #25	ENSJJAG00000024039	Mpped2 (ENSJJAG00000003402) #28	Fshb (ENSJJAG00000011959) #31	Kcna4 (ENSJJAG00000017398)	ENSJJAG00000017907	Mettl15 (ENSJJAG00000019606)	Lgr4 (ENSJJAG00000019874)	ENSJJAG00000005395	Bbox1 (ENSJJAG00000010708)	Fibin (ENSJJAG00000012158)	Slc5a12 (ENSJJAG00000015003)	Ano3 (ENSJJAG00000021499)
Kangaroo rat	MODERN SPECIES	365	A930018P22Rik (ENSDORG00000008868)	ENSDORG00000024985	D430041D05Rik (ENSDORG00000012272)	Hipk3 (ENSDORG00000008654)	Cstf3 (ENSDORG00000005898)	Tcp11l1 (ENSDORG00000005896)	Depdc7 (ENSDORG00000006010)	Qser1 (ENSDORG00000011190)	Prrg4 (ENSDORG00000011188)	Ccdc73 (ENSDORG00000004144) #14	ENSDORG00000004141 #16	Wt1 (ENSDORG00000013725) #19	Them7 (ENSDORG00000029154) #20	Rcn1 (ENSDORG00000006013) #21	ENSDORG00000025302	Pax6 (ENSDORG00000000254) #22	Elp4 (ENSDORG00000000252) #23	Immp1l (ENSDORG00000000250) #24	ENSDORG00000000248 #25	Mpped2 (ENSDORG00000030055) #28	Arl14ep (ENSDORG00000010212) #29	ENSDORG00000029216	Fshb (ENSDORG00000014836) #31	Kcna4 (ENSDORG00000027145)	ENSDORG00000001580	Kif18a (ENSDORG00000010978)	Bdnf (ENSDORG00000026120)	Lin7c (ENSDORG00000024849)	Lgr4 (ENSDORG00000003213)	ENSDORG00000006760	Bbox1 (ENSDORG00000009197)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Hystricomorpha	ANCESTRAL SPECIES	50	ENSGT00940000160434	ENSGT00390000012069	ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156289	ENSGT00940000163661	ENSGT00940000156076.a.a.b	ENSGT00390000013104.l	ENSGT00940000157462.C	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Hystricomorpha_a	ANCESTRAL SPECIES	57	ENSGT00940000160434	ENSGT00390000012069	ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156289	ENSGT00940000163661	ENSGT00940000156076.a.a.b	ENSGT00390000013104.l	ENSGT00940000157462.C	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Hystricomorpha_b	ANCESTRAL SPECIES	69	ENSGT00940000160434	ENSGT00390000012069	ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156289	ENSGT00940000163661	ENSGT00940000156076.a.a.b	ENSGT00390000013104.l	ENSGT00940000157462.C	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623
Long-tailed chinchilla	MODERN SPECIES	183	TSPAN4 (ENSCLAG00000002061)	CHID1 (ENSCLAG00000001977)	AP2A2 (ENSCLAG00000001787)	ENSCLAG00000001717	ENSCLAG00000001697	MUC2 (ENSCLAG00000001620)	ENSCLAG00000001498	TOLLIP (ENSCLAG00000001459)	BRSK2 (ENSCLAG00000001376)	MOB2 (ENSCLAG00000001327)	DUSP8 (ENSCLAG00000001311)	CCDC73 (ENSCLAG00000001450) #14	EIF3M (ENSCLAG00000001396) #16	WT1 (ENSCLAG00000001374) #19	RCN1 (ENSCLAG00000001362) #21	PAX6 (ENSCLAG00000001303) #22	ELP4 (ENSCLAG00000001270) #23	IMMP1L (ENSCLAG00000001244) #24	DNAJC24 (ENSCLAG00000001222) #25	MPPED2 (ENSCLAG00000001209) #28	ARL14EP (ENSCLAG00000001182) #29	FSHB (ENSCLAG00000001148) #31	KCNA4 (ENSCLAG00000017433)	METTL15 (ENSCLAG00000001125)	KIF18A (ENSCLAG00000001083)	BDNF (ENSCLAG00000001053)	LIN7C (ENSCLAG00000001942)	LGR4 (ENSCLAG00000003211)	CCDC34 (ENSCLAG00000003164)	BBOX1 (ENSCLAG00000003118)	FIBIN (ENSCLAG00000003084)
Degu	MODERN SPECIES	134	CHID1 (ENSODEG00000014765)	AP2A2 (ENSODEG00000015034)	ENSODEG00000015762	MUC2 (ENSODEG00000015645)	ENSODEG00000015465	ENSODEG00000014796	ENSODEG00000015653	TOLLIP (ENSODEG00000015586)	BRSK2 (ENSODEG00000015187)	MOB2 (ENSODEG00000015616)	DUSP8 (ENSODEG00000015741)	ENSODEG00000015124	ENSODEG00000015300 #16	ENSODEG00000015471 #19	ENSODEG00000015443 #21	PAX6 (ENSODEG00000016035) #22	ELP4 (ENSODEG00000015514) #23	IMMP1L (ENSODEG00000015553) #24	DNAJC24 (ENSODEG00000015775) #25
Guinea pig	MODERN SPECIES	81											ENSCPOG00000024691	ENSCPOG00000038368	EIF3M (ENSCPOG00000003846) #16	WT1 (ENSCPOG00000033316) #19	RCN1 (ENSCPOG00000033869) #21	PAX6 (ENSCPOG00000007245) #22	ELP4 (ENSCPOG00000007237) #23	IMMP1L (ENSCPOG00000020043) #24	DNAJC24 (ENSCPOG00000005159) #25	MPPED2 (ENSCPOG00000034992) #28	ARL14EP (ENSCPOG00000007727) #29	FSHB (ENSCPOG00000007723) #31	KCNA4 (ENSCPOG00000039821)	ENSCPOG00000009931	GLRA1 (ENSCPOG00000013725)	G3BP1 (ENSCPOG00000006626)	ATOX1 (ENSCPOG00000034767)	SPARC (ENSCPOG00000025242)	FAT2 (ENSCPOG00000014431)	SLC36A1 (ENSCPOG00000014430)	ENSCPOG00000034856
Naked mole-rat female	MODERN SPECIES	24	OR52D1 (ENSHGLG00000020326)	UBQLN3 (ENSHGLG00000004972)	ENSHGLG00000006050	ENSHGLG00000020413	ENSHGLG00000020418	ENSHGLG00000040565	ENSHGLG00000033504	ENSHGLG00000008575	MOB2 (ENSHGLG00000007926)	ENSHGLG00000038023	ENSHGLG00000006208 #14	EIF3M (ENSHGLG00000005161) #16	ENSHGLG00000048619	WT1 (ENSHGLG00000004253) #19	RCN1 (ENSHGLG00000004070) #21	PAX6 (ENSHGLG00000010889) #22	ELP4 (ENSHGLG00000009198) #23	ENSHGLG00000040580	IMMP1L (ENSHGLG00000008856) #24	DNAJC24 (ENSHGLG00000008508) #25	MPPED2 (ENSHGLG00000008458) #28	ARL14EP (ENSHGLG00000008363) #29	FSHB (ENSHGLG00000043984) #31	KCNA4 (ENSHGLG00000011830)	METTL15 (ENSHGLG00000038346)	KIF18A (ENSHGLG00000010300)	ENSHGLG00000037469	BDNF (ENSHGLG00000008332)	ENSHGLG00000032654	LIN7C (ENSHGLG00000013510)	LGR4 (ENSHGLG00000010222)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Marmotini	ANCESTRAL SPECIES	22	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b.j.b #21	ENSGT01010000222360.D.b.j.a #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a.f	ENSGT00940000157925	ENSGT00730000111271
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b.j.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000166413	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a.f	ENSGT00940000157925
Arctic ground squirrel	MODERN SPECIES	10	FBXO3 (ENSUPAG00010019358)	ENSUPAG00010019350	C11orf91 (ENSUPAG00010019347)	KIAA1549L (ENSUPAG00010019291)	HIPK3 (ENSUPAG00010019217)	CSTF3 (ENSUPAG00010019186)	DEPDC7 (ENSUPAG00010019164)	QSER1 (ENSUPAG00010019111)	PRRG4 (ENSUPAG00010019105)	ENSUPAG00010019098	CCDC73 (ENSUPAG00010019088) #14	EIF3M (ENSUPAG00010019056) #16	WT1 (ENSUPAG00010018940) #19	ENSUPAG00010018932 #20	RCN1 (ENSUPAG00010018924) #21	PAX6 (ENSUPAG00010018657) #22	ELP4 (ENSUPAG00010018640) #23	IMMP1L (ENSUPAG00010018631) #24	DNAJC24 (ENSUPAG00010018627) #25	ENSUPAG00010018615	ENSUPAG00010018602	MPPED2 (ENSUPAG00010018568) #28	ARL14EP (ENSUPAG00010018563) #29	FSHB (ENSUPAG00010018558) #31	KCNA4 (ENSUPAG00010018555)	ENSUPAG00010018551
Squirrel	MODERN SPECIES	133	FBXO3 (ENSSTOG00000016405)	ENSSTOG00000011395	C11orf91 (ENSSTOG00000026942)	KIAA1549L (ENSSTOG00000011381)	HIPK3 (ENSSTOG00000009714)	CSTF3 (ENSSTOG00000013306)	TCP11L1 (ENSSTOG00000013296)	DEPDC7 (ENSSTOG00000013289)	QSER1 (ENSSTOG00000027161)	PRRG4 (ENSSTOG00000002830)	ENSSTOG00000024817 #14	EIF3M (ENSSTOG00000010502) #16	WT1 (ENSSTOG00000023716) #19	ENSSTOG00000034266 #20	ENSSTOG00000008930 #21	PAX6 (ENSSTOG00000003211) #22	ELP4 (ENSSTOG00000003187) #23	IMMP1L (ENSSTOG00000003179) #24	DNAJC24 (ENSSTOG00000003172) #25	ENSSTOG00000003155	MPPED2 (ENSSTOG00000015336) #28	ARL14EP (ENSSTOG00000022570) #29	FSHB (ENSSTOG00000000563) #31	KCNA4 (ENSSTOG00000020307)	METTL15 (ENSSTOG00000026358)	ENSSTOG00000029217	KIF18A (ENSSTOG00000013884)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000008026	C11orf91 (ENSMMMG00000008017)	KIAA1549L (ENSMMMG00000007942)	HIPK3 (ENSMMMG00000007810)	ENSMMMG00000007795	CSTF3 (ENSMMMG00000007765)	TCP11L1 (ENSMMMG00000007740)	QSER1 (ENSMMMG00000007677)	PRRG4 (ENSMMMG00000007662)	ENSMMMG00000007642	CCDC73 (ENSMMMG00000007616) #14	EIF3M (ENSMMMG00000007588) #16	WT1 (ENSMMMG00000007507) #19	ENSMMMG00000007498 #20	ENSMMMG00000007458 #21	PAX6 (ENSMMMG00000007169) #22	ELP4 (ENSMMMG00000007140) #23	IMMP1L (ENSMMMG00000007121) #24	ENSMMMG00000007114 #25	ENSMMMG00000007096	ENSMMMG00000007066	MPPED2 (ENSMMMG00000007054) #28	ARL14EP (ENSMMMG00000007044) #29	FSHB (ENSMMMG00000007033) #31	KCNA4 (ENSMMMG00000006997)	METTL15 (ENSMMMG00000006976)	KIF18A (ENSMMMG00000006947)	BDNF (ENSMMMG00000006928)	ENSMMMG00000006917	LGR4 (ENSMMMG00000006845)	CCDC34 (ENSMMMG00000006837)
Eurasian red squirrel	MODERN SPECIES	2	KIAA1549L (ENSSVLG00005005254)	HIPK3 (ENSSVLG00005005422)	ENSSVLG00005005475	CSTF3 (ENSSVLG00005005518)	TCP11L1 (ENSSVLG00005005675)	DEPDC7 (ENSSVLG00005005722)	QSER1 (ENSSVLG00005005823)	PRRG4 (ENSSVLG00005005895)	CCDC73 (ENSSVLG00005005944) #14	EIF3M (ENSSVLG00005006089) #16	WT1 (ENSSVLG00005006232) #19	ENSSVLG00005006549 #20	RCN1 (ENSSVLG00005006575) #21	ENSSVLG00005006612	ENSSVLG00005006643	PAX6 (ENSSVLG00005006723) #22	ELP4 (ENSSVLG00005007005) #23	IMMP1L (ENSSVLG00005007051) #24	DNAJC24 (ENSSVLG00005007079) #25	DCDC1 (ENSSVLG00005007148)	ENSSVLG00005007367	MPPED2 (ENSSVLG00005007385) #28	ARL14EP (ENSSVLG00005007404) #29	FSHB (ENSSVLG00005007418) #31	KCNA4 (ENSSVLG00005007441)	METTL15 (ENSSVLG00005007460)	ENSSVLG00005007473	KIF18A (ENSSVLG00005007495)	BDNF (ENSSVLG00005007577)	ENSSVLG00005007614	LGR4 (ENSSVLG00005007742)
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00390000016309	ENSGT00390000002169	ENSGT01030000240070	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Rabbit	MODERN SPECIES		KIAA1549L (ENSOCUG00000029147)	HIPK3 (ENSOCUG00000001215)	CSTF3 (ENSOCUG00000015417)	ENSOCUG00000023635	TCP11L1 (ENSOCUG00000015409)	QSER1 (ENSOCUG00000015381)	PRRG4 (ENSOCUG00000012440)	ENSOCUG00000035878	CCDC73 (ENSOCUG00000004491) #14	ENSOCUG00000004483 #16	WT1 (ENSOCUG00000005882) #19	ENSOCUG00000033792	ENSOCUG00000031206	ENSOCUG00000029350 #20	RCN1 (ENSOCUG00000016268) #21	PAX6 (ENSOCUG00000011075) #22	ELP4 (ENSOCUG00000001925) #23	IMMP1L (ENSOCUG00000029612) #24	DNAJC24 (ENSOCUG00000027642) #25	DCDC1 (ENSOCUG00000016555)	MPPED2 (ENSOCUG00000004904) #28	ARL14EP (ENSOCUG00000027628) #29	FSHB (ENSOCUG00000021932) #31	KCNA4 (ENSOCUG00000014475)	METTL15 (ENSOCUG00000014291)	KIF18A (ENSOCUG00000013950)	BDNF (ENSOCUG00000006731)	LIN7C (ENSOCUG00000004075)	LGR4 (ENSOCUG00000004061)	CCDC34 (ENSOCUG00000004054)	ENSOCUG00000037126
Pika	MODERN SPECIES	3347																PAX6 (ENSOPRG00000001678) #22	ELP4 (ENSOPRG00000001652) #23	IMMP1L (ENSOPRG00000001647) #24	DNAJC24 (ENSOPRG00000001638) #25
Tree shrew	MODERN SPECIES	321																PAX6 (ENSTBEG00000004748) #22	ELP4 (ENSTBEG00000004481) #23
Primates	ANCESTRAL SPECIES		ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Tarsier	MODERN SPECIES	4432																PAX6 (ENSTSYG00000011965) #22	ELP4 (ENSTSYG00000011963) #23	IMMP1L (ENSTSYG00000009257) #24	DNAJC24 (ENSTSYG00000009243) #25	ENSTSYG00000006710	ENSTSYG00000004242 #28
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00410000028070	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00940000153305.c.e.a	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00390000005496.f	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.o.b #21	ENSGT00410000028070	ENSGT01010000222360.D.b.p #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00940000153305.c.e.a	ENSGT00390000007725.B.d	ENSGT00390000004856.w.a.a.a
Gibbon	MODERN SPECIES	5	ENSNLEG00000018183	FBXO3 (ENSNLEG00000017908)	ENSNLEG00000027673	KIAA1549L (ENSNLEG00000026545)	HIPK3 (ENSNLEG00000017906)	CSTF3 (ENSNLEG00000017901)	ENSNLEG00000030363	TCP11L1 (ENSNLEG00000017899)	ENSNLEG00000017897	QSER1 (ENSNLEG00000017896)	PRRG4 (ENSNLEG00000028029)	CCDC73 (ENSNLEG00000017894) #14	EIF3M (ENSNLEG00000029977) #16	ENSNLEG00000017890 #19	RCN1 (ENSNLEG00000017889) #21	ENSNLEG00000033407 #22	ELP4 (ENSNLEG00000017886) #23	IMMP1L (ENSNLEG00000017882) #24	DNAJC24 (ENSNLEG00000033486) #25	ENSNLEG00000017876	ENSNLEG00000017872 #26	MPPED2 (ENSNLEG00000017871) #28	ARL14EP (ENSNLEG00000017870) #29	FSHB (ENSNLEG00000017869) #31	METTL15 (ENSNLEG00000033555)	KIF18A (ENSNLEG00000017861)	ENSNLEG00000033743	ENSNLEG00000017857	ENSNLEG00000034013	LIN7C (ENSNLEG00000031840)	LGR4 (ENSNLEG00000017852)
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00390000005496.f	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070.d	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00390000004856.w.a.a.a	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Orangutan	MODERN SPECIES	2	FBXO3 (ENSPPYG00000003369)	CD59 (ENSPPYG00000003370)	C11orf91 (ENSPPYG00000038055)	KIAA1549L (ENSPPYG00000003373)	HIPK3 (ENSPPYG00000003374)	CSTF3 (ENSPPYG00000003375)	TCP11L1 (ENSPPYG00000003376)	DEPDC7 (ENSPPYG00000003377)	QSER1 (ENSPPYG00000003378)	PRRG4 (ENSPPYG00000003379)	CCDC73 (ENSPPYG00000003380) #14	EIF3M (ENSPPYG00000038184) #16	WT1 (ENSPPYG00000029822) #19	RCN1 (ENSPPYG00000003385) #21	ENSPPYG00000003384	ENSPPYG00000003386 #22	ENSPPYG00000003387 #23	IMMP1L (ENSPPYG00000003389) #24	DNAJC24 (ENSPPYG00000041456) #25	DCDC1 (ENSPPYG00000003391)	MPPED2 (ENSPPYG00000003395) #28	ARL14EP (ENSPPYG00000003396) #29	FSHB (ENSPPYG00000003397) #31	KCNA4 (ENSPPYG00000003398)	METTL15 (ENSPPYG00000003399)	KIF18A (ENSPPYG00000003400)	BDNF (ENSPPYG00000003401)	LIN7C (ENSPPYG00000003403)	LGR4 (ENSPPYG00000003405)	CCDC34 (ENSPPYG00000003406)	BBOX1 (ENSPPYG00000003407)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00390000005496.f	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070.d	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00390000004856.w.a.a.a	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Gorilla	MODERN SPECIES	2	FBXO3 (ENSGGOG00000001949)	ENSGGOG00000041311	KIAA1549L (ENSGGOG00000004207)	HIPK3 (ENSGGOG00000025468)	CSTF3 (ENSGGOG00000026591)	ENSGGOG00000040397	TCP11L1 (ENSGGOG00000005771)	DEPDC7 (ENSGGOG00000024043)	QSER1 (ENSGGOG00000008849)	PRRG4 (ENSGGOG00000004991)	CCDC73 (ENSGGOG00000002801) #14	EIF3M (ENSGGOG00000002796) #16	WT1 (ENSGGOG00000011586) #19	ENSGGOG00000025051	RCN1 (ENSGGOG00000025038) #21	ENSGGOG00000010246 #22	ENSGGOG00000027818 #23	IMMP1L (ENSGGOG00000014897) #24	DNAJC24 (ENSGGOG00000022150) #25	DCDC1 (ENSGGOG00000002435)	MPPED2 (ENSGGOG00000010368) #28	ARL14EP (ENSGGOG00000014384) #29	FSHB (ENSGGOG00000009510) #31	ENSGGOG00000006919	METTL15 (ENSGGOG00000026989)	KIF18A (ENSGGOG00000000521)	ENSGGOG00000006038	ENSGGOG00000028388	ENSGGOG00000036607	ENSGGOG00000002641	LIN7C (ENSGGOG00000026123)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00390000005496.f	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070.d	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00390000004856.w.a.a.a	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Human	MODERN SPECIES	2	CD59 (ENSG00000085063)	ENSG00000284969	C11orf91 (ENSG00000205177)	KIAA1549L (ENSG00000110427)	HIPK3 (ENSG00000110422)	CSTF3 (ENSG00000176102)	TCP11L1 (ENSG00000176148)	DEPDC7 (ENSG00000121690)	QSER1 (ENSG00000060749)	PRRG4 (ENSG00000135378)	CCDC73 (ENSG00000186714) #14	EIF3M (ENSG00000149100) #16	WT1 (ENSG00000184937) #19	RCN1 (ENSG00000049449) #21	ENSG00000285283	PAX6 (ENSG00000007372) #22	ELP4 (ENSG00000109911) #23	IMMP1L (ENSG00000148950) #24	DNAJC24 (ENSG00000170946) #25	DCDC1 (ENSG00000170959)	MPPED2 (ENSG00000066382) #28	ARL14EP (ENSG00000152219) #29	FSHB (ENSG00000131808) #31	KCNA4 (ENSG00000182255)	METTL15 (ENSG00000169519)	KIF18A (ENSG00000121621)	BDNF (ENSG00000176697)	LIN7C (ENSG00000148943)	LGR4 (ENSG00000205213)	CCDC34 (ENSG00000109881)	BBOX1 (ENSG00000129151)
Pan	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00390000005496.f	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070.d	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00940000153305.c.e.a	ENSGT00390000007725.B.d	ENSGT00390000004856.w.a.a.a	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Bonobo	MODERN SPECIES	2	ENSPPAG00000016006	FBXO3 (ENSPPAG00000032146)	CD59 (ENSPPAG00000036733)	ENSPPAG00000033085	HIPK3 (ENSPPAG00000042665)	CSTF3 (ENSPPAG00000027358)	ENSPPAG00000042143	TCP11L1 (ENSPPAG00000028485)	DEPDC7 (ENSPPAG00000039670)	QSER1 (ENSPPAG00000039290)	PRRG4 (ENSPPAG00000008783)	CCDC73 (ENSPPAG00000018334) #14	EIF3M (ENSPPAG00000029515) #16	WT1 (ENSPPAG00000033782) #19	ENSPPAG00000040558 #21	ENSPPAG00000043756 #22	ENSPPAG00000037785 #23	ENSPPAG00000038373 #23	IMMP1L (ENSPPAG00000043763) #24	DNAJC24 (ENSPPAG00000031696) #25	DCDC1 (ENSPPAG00000034560)	MPPED2 (ENSPPAG00000023523) #28	ARL14EP (ENSPPAG00000043692) #29	FSHB (ENSPPAG00000038796) #31	METTL15 (ENSPPAG00000028911)	KIF18A (ENSPPAG00000035021)	ENSPPAG00000039519	ENSPPAG00000036272	ENSPPAG00000029232	ENSPPAG00000014750	LIN7C (ENSPPAG00000034836)
Chimpanzee	MODERN SPECIES	2	FBXO3 (ENSPTRG00000003490)	CD59 (ENSPTRG00000003489)	KIAA1549L (ENSPTRG00000003487)	HIPK3 (ENSPTRG00000003486)	CSTF3 (ENSPTRG00000003485)	ENSPTRG00000043490	TCP11L1 (ENSPTRG00000003483)	DEPDC7 (ENSPTRG00000003482)	QSER1 (ENSPTRG00000003481)	PRRG4 (ENSPTRG00000044460)	CCDC73 (ENSPTRG00000003479) #14	EIF3M (ENSPTRG00000003478) #16	WT1 (ENSPTRG00000003476) #19	ENSPTRG00000050578	RCN1 (ENSPTRG00000046292) #21	PAX6 (ENSPTRG00000003474) #22	ELP4 (ENSPTRG00000003473) #23	IMMP1L (ENSPTRG00000003472) #24	DNAJC24 (ENSPTRG00000003471) #25	DCDC1 (ENSPTRG00000003467)	MPPED2 (ENSPTRG00000003466) #28	ARL14EP (ENSPTRG00000003465) #29	FSHB (ENSPTRG00000003463) #31	METTL15 (ENSPTRG00000003461)	KIF18A (ENSPTRG00000003460)	ENSPTRG00000043934	ENSPTRG00000051301	BDNF (ENSPTRG00000040882)	ENSPTRG00000043690	LIN7C (ENSPTRG00000003457)	LGR4 (ENSPTRG00000028697)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00940000153305.c.e.a	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Rhinopithecus	ANCESTRAL SPECIES	111	ENSGT00390000016309	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT01010000222360.D.b.o.a.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586.c #29	ENSGT00940000160051 #31	ENSGT00390000003219.g
Golden snub-nosed monkey	MODERN SPECIES	3270	FBXO3 (ENSRROG00000040121)	CD59 (ENSRROG00000024041)	KIAA1549L (ENSRROG00000039380)	HIPK3 (ENSRROG00000043050)	CSTF3 (ENSRROG00000043450)	TCP11L1 (ENSRROG00000036609)	DEPDC7 (ENSRROG00000037551)	ENSRROG00000033898	QSER1 (ENSRROG00000041839)	PRRG4 (ENSRROG00000027600)	CCDC73 (ENSRROG00000029039) #14	EIF3M (ENSRROG00000041725) #16	WT1 (ENSRROG00000021147) #19	ENSRROG00000031511	ENSRROG00000001783 #21	PAX6 (ENSRROG00000035709) #22	ELP4 (ENSRROG00000023437) #23	IMMP1L (ENSRROG00000040703) #24	ENSRROG00000024614	DNAJC24 (ENSRROG00000033095) #25	DCDC1 (ENSRROG00000003321)	MPPED2 (ENSRROG00000033004) #28	ARL14EP (ENSRROG00000031136) #29
Black snub-nosed monkey	MODERN SPECIES	802																PAX6 (ENSRBIG00000033156) #22	ELP4 (ENSRBIG00000042707) #23	IMMP1L (ENSRBIG00000025829) #24	DNAJC24 (ENSRBIG00000030191) #25	ENSRBIG00000015247	ENSRBIG00000000044 #26	ENSRBIG00000030640
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.m.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Vervet Monkey	MODERN SPECIES		LMO2 (ENSCSAG00000005369)	FBXO3 (ENSCSAG00000005366)	CD59 (ENSCSAG00000005360)	C11orf91 (ENSCSAG00000005348)	KIAA1549L (ENSCSAG00000005316)	HIPK3 (ENSCSAG00000005298)	ENSCSAG00000005283	TCP11L1 (ENSCSAG00000005280)	DEPDC7 (ENSCSAG00000005274)	QSER1 (ENSCSAG00000005271)	PRRG4 (ENSCSAG00000005265)	CCDC73 (ENSCSAG00000005263) #14	EIF3M (ENSCSAG00000005261) #16	WT1 (ENSCSAG00000005257) #19	RCN1 (ENSCSAG00000005255) #21	PAX6 (ENSCSAG00000005253) #22	ELP4 (ENSCSAG00000005250) #23	IMMP1L (ENSCSAG00000005248) #24	DNAJC24 (ENSCSAG00000005245) #25	ENSCSAG00000005242	ENSCSAG00000005240 #26	MPPED2 (ENSCSAG00000005239) #28	ARL14EP (ENSCSAG00000005237) #29	FSHB (ENSCSAG00000005235) #31	KCNA4 (ENSCSAG00000019316)	METTL15 (ENSCSAG00000005230)	ENSCSAG00000005219	KIF18A (ENSCSAG00000005218)	BDNF (ENSCSAG00000019317)	LIN7C (ENSCSAG00000005215)	LGR4 (ENSCSAG00000005209)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a.a.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a.a.a	ENSGT00940000159058	ENSGT00940000153305.c.e.a	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00410000029507
Olive baboon	MODERN SPECIES	3	ENSPANG00000040901	CSTF3 (ENSPANG00000013722)	TCP11L1 (ENSPANG00000005094)	DEPDC7 (ENSPANG00000007554)	QSER1 (ENSPANG00000011445)	PRRG4 (ENSPANG00000014281)	ENSPANG00000023649	EIF3M (ENSPANG00000006540) #16	WT1 (ENSPANG00000019482) #19	ENSPANG00000043688	ENSPANG00000038077	ENSPANG00000031209	ENSPANG00000018409 #21	ENSPANG00000049611	ENSPANG00000047733	PAX6 (ENSPANG00000005448) #22	ELP4 (ENSPANG00000025795) #23	IMMP1L (ENSPANG00000030673) #24	ENSPANG00000043615	ENSPANG00000042363	ENSPANG00000037947	DCDC1 (ENSPANG00000019082)	MPPED2 (ENSPANG00000007977) #28	ARL14EP (ENSPANG00000035131) #29	FSHB (ENSPANG00000038639) #31	ENSPANG00000025704	KCNA4 (ENSPANG00000040485)	ENSPANG00000042193	METTL15 (ENSPANG00000008467)	KIF18A (ENSPANG00000007185)	ENSPANG00000042438
Cercopithecinae_d	ANCESTRAL SPECIES	61	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a.a.a	ENSGT00940000159058	ENSGT00390000009724.l.u.a.b.b	ENSGT00390000014756.m.a.b
Drill	MODERN SPECIES	1463	LMO2 (ENSMLEG00000029197)	FBXO3 (ENSMLEG00000041134)	CD59 (ENSMLEG00000037740)	KIAA1549L (ENSMLEG00000027768)	HIPK3 (ENSMLEG00000031846)	ENSMLEG00000038576	CSTF3 (ENSMLEG00000039594)	TCP11L1 (ENSMLEG00000042483)	DEPDC7 (ENSMLEG00000042787)	QSER1 (ENSMLEG00000027791)	PRRG4 (ENSMLEG00000039168)	CCDC73 (ENSMLEG00000039999) #14	EIF3M (ENSMLEG00000000401) #16	WT1 (ENSMLEG00000040206) #19	RCN1 (ENSMLEG00000041748) #21	PAX6 (ENSMLEG00000030045) #22	ELP4 (ENSMLEG00000028701) #23	IMMP1L (ENSMLEG00000017715) #24	DNAJC24 (ENSMLEG00000042215) #25	DCDC1 (ENSMLEG00000039147)	MPPED2 (ENSMLEG00000038736) #28	ARL14EP (ENSMLEG00000032547) #29	FSHB (ENSMLEG00000037161) #31	ENSMLEG00000005635	ENSMLEG00000028034
Sooty mangabey	MODERN SPECIES	660	LMO2 (ENSCATG00000035418)	FBXO3 (ENSCATG00000043919)	C11orf91 (ENSCATG00000038135)	KIAA1549L (ENSCATG00000036464)	HIPK3 (ENSCATG00000037808)	CSTF3 (ENSCATG00000007080)	TCP11L1 (ENSCATG00000038705)	DEPDC7 (ENSCATG00000014838)	QSER1 (ENSCATG00000002800)	PRRG4 (ENSCATG00000033395)	CCDC73 (ENSCATG00000033902) #14	EIF3M (ENSCATG00000014736) #16	WT1 (ENSCATG00000034786) #19	ENSCATG00000032474	RCN1 (ENSCATG00000008559) #21	PAX6 (ENSCATG00000036582) #22	ELP4 (ENSCATG00000030606) #23	IMMP1L (ENSCATG00000043671) #24	DNAJC24 (ENSCATG00000038226) #25	DCDC1 (ENSCATG00000021904)	MPPED2 (ENSCATG00000039565) #28	ARL14EP (ENSCATG00000038822) #29	FSHB (ENSCATG00000037981) #31	ENSCATG00000021392	METTL15 (ENSCATG00000039486)	KIF18A (ENSCATG00000031251)
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.`b.a #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a.a.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.a.b
Pig-tailed macaque	MODERN SPECIES	485	LMO2 (ENSMNEG00000031732)	FBXO3 (ENSMNEG00000045464)	C11orf91 (ENSMNEG00000033587)	KIAA1549L (ENSMNEG00000040724)	HIPK3 (ENSMNEG00000030400)	CSTF3 (ENSMNEG00000021807)	TCP11L1 (ENSMNEG00000034850)	DEPDC7 (ENSMNEG00000010538)	QSER1 (ENSMNEG00000038918)	PRRG4 (ENSMNEG00000035106)	CCDC73 (ENSMNEG00000037225) #14	EIF3M (ENSMNEG00000002856) #16	WT1 (ENSMNEG00000010071) #19	ENSMNEG00000036921	RCN1 (ENSMNEG00000032501) #21	PAX6 (ENSMNEG00000035602) #22	ELP4 (ENSMNEG00000044060) #23	IMMP1L (ENSMNEG00000002551) #24	DNAJC24 (ENSMNEG00000038746) #25	DCDC1 (ENSMNEG00000028720)	MPPED2 (ENSMNEG00000033181) #28	ARL14EP (ENSMNEG00000027874) #29	FSHB (ENSMNEG00000009932) #31	ENSMNEG00000032978	ENSMNEG00000007805	METTL15 (ENSMNEG00000037173)	KIF18A (ENSMNEG00000036550)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00910000148919	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT01100000263539.b.b.b.a.b.b.a.b	ENSGT00940000156734 #19	ENSGT01030000240314	ENSGT01010000222360.D.b.p #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00550000075025.`b.a #24	ENSGT00390000001443 #23	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.m.a.a.a	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.b.a.b.b.b.a.a.c.b.a	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.a.b
Crab-eating macaque	MODERN SPECIES	5	CSTF3 (ENSMFAG00000029516)	ENSMFAG00000053275	TCP11L1 (ENSMFAG00000036174)	DEPDC7 (ENSMFAG00000030758)	ENSMFAG00000054564	QSER1 (ENSMFAG00000042029)	ENSMFAG00000050331	PRRG4 (ENSMFAG00000001744)	CCDC73 (ENSMFAG00000043757) #14	EIF3M (ENSMFAG00000040767) #16	ENSMFAG00000062574	WT1 (ENSMFAG00000030746) #19	ENSMFAG00000059799	RCN1 (ENSMFAG00000029569) #21	ENSMFAG00000044003	PAX6 (ENSMFAG00000019311) #22	ELP4 (ENSMFAG00000001333) #23	ENSMFAG00000059878	ENSMFAG00000060830	IMMP1L (ENSMFAG00000030415) #24	DCDC1 (ENSMFAG00000040936)	MPPED2 (ENSMFAG00000045441) #28	ARL14EP (ENSMFAG00000001165) #29	FSHB (ENSMFAG00000039808) #31	ENSMFAG00000001947	ENSMFAG00000049275	ENSMFAG00000050246	ENSMFAG00000062924	ENSMFAG00000004430	ENSMFAG00000054669	METTL15 (ENSMFAG00000043868)
Rhesus	MODERN SPECIES	5	KIAA1549L (ENSMMUG00000017218)	HIPK3 (ENSMMUG00000019988)	CSTF3 (ENSMMUG00000002542)	TCP11L1 (ENSMMUG00000002539)	DEPDC7 (ENSMMUG00000002535)	QSER1 (ENSMMUG00000001536)	ENSMMUG00000055352	PRRG4 (ENSMMUG00000049850)	CCDC73 (ENSMMUG00000009028) #14	EIF3M (ENSMMUG00000009026) #16	ENSMMUG00000060261	WT1 (ENSMMUG00000009881) #19	ENSMMUG00000041430	RCN1 (ENSMMUG00000018360) #21	ENSMMUG00000043127	PAX6 (ENSMMUG00000016810) #22	DNAJC24 (ENSMMUG00000016807) #23	IMMP1L (ENSMMUG00000016806) #24	ENSMMUG00000049710	ENSMMUG00000006842 #26	MPPED2 (ENSMMUG00000017592) #28	ARL14EP (ENSMMUG00000017590) #29	FSHB (ENSMMUG00000042298) #31	ENSMMUG00000016472	KCNA4 (ENSMMUG00000055210)	ENSMMUG00000065335	METTL15 (ENSMMUG00000013616)	KIF18A (ENSMMUG00000013613)	BDNF (ENSMMUG00000008634)	ENSMMUG00000053553	LIN7C (ENSMMUG00000023119)
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.y.b #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.l	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Mas night monkey	MODERN SPECIES	349	FBXO3 (ENSANAG00000026400)	CD59 (ENSANAG00000033427)	C11orf91 (ENSANAG00000035705)	KIAA1549L (ENSANAG00000028969)	ENSANAG00000037529	HIPK3 (ENSANAG00000034057)	CSTF3 (ENSANAG00000020699)	TCP11L1 (ENSANAG00000029283)	DEPDC7 (ENSANAG00000025421)	QSER1 (ENSANAG00000034582)	PRRG4 (ENSANAG00000033287)	CCDC73 (ENSANAG00000021031) #14	EIF3M (ENSANAG00000031661) #16	WT1 (ENSANAG00000025090) #19	RCN1 (ENSANAG00000027955) #21	PAX6 (ENSANAG00000033670) #22	ELP4 (ENSANAG00000025916) #23	IMMP1L (ENSANAG00000035404) #24	DNAJC24 (ENSANAG00000030586) #25	DCDC1 (ENSANAG00000032663)	MPPED2 (ENSANAG00000031909) #28	ENSANAG00000033548 #29	FSHB (ENSANAG00000031137) #31	ENSANAG00000023684	KIF18A (ENSANAG00000029125)	BDNF (ENSANAG00000024997)	LIN7C (ENSANAG00000029538)	LGR4 (ENSANAG00000029728)	CCDC34 (ENSANAG00000031855)	BBOX1 (ENSANAG00000030801)	ENSANAG00000035077
Cebidae	ANCESTRAL SPECIES		ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.y.b #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756.l	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00940000153402.c.a.a.b.b.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025.y.b #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00390000014756.l	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00940000159545
Capuchin	MODERN SPECIES	195																PAX6 (ENSCCAG00000027337) #22	ELP4 (ENSCCAG00000024160) #23	IMMP1L (ENSCCAG00000026569) #24	DNAJC24 (ENSCCAG00000022237) #25	DCDC1 (ENSCCAG00000030308)	MPPED2 (ENSCCAG00000025105) #28	ARL14EP (ENSCCAG00000024703) #29	FSHB (ENSCCAG00000023183) #31	METTL15 (ENSCCAG00000021207)	KIF18A (ENSCCAG00000020570)
Bolivian squirrel monkey	MODERN SPECIES	42	FBXO3 (ENSSBOG00000023671)	CD59 (ENSSBOG00000022436)	C11orf91 (ENSSBOG00000020764)	KIAA1549L (ENSSBOG00000033426)	HIPK3 (ENSSBOG00000033538)	CSTF3 (ENSSBOG00000024764)	TCP11L1 (ENSSBOG00000022211)	DEPDC7 (ENSSBOG00000000510)	ENSSBOG00000022725	QSER1 (ENSSBOG00000030905)	PRRG4 (ENSSBOG00000021778)	CCDC73 (ENSSBOG00000026906) #14	EIF3M (ENSSBOG00000035716) #16	WT1 (ENSSBOG00000020662) #19	RCN1 (ENSSBOG00000028033) #21	PAX6 (ENSSBOG00000006775) #22	ELP4 (ENSSBOG00000020947) #23	ENSSBOG00000015478 #24	DNAJC24 (ENSSBOG00000031346) #25	ENSSBOG00000032005	ENSSBOG00000032797	ENSSBOG00000032990 #26	MPPED2 (ENSSBOG00000000302) #28	ARL14EP (ENSSBOG00000021179) #29	FSHB (ENSSBOG00000034865) #31	ENSSBOG00000018245	KIF18A (ENSSBOG00000028620)	BDNF (ENSSBOG00000027637)	LIN7C (ENSSBOG00000032877)	LGR4 (ENSSBOG00000016508)	CCDC34 (ENSSBOG00000032847)
Marmoset	MODERN SPECIES	2	ENSCJAG00000076270	LMO2 (ENSCJAG00000010531)	FBXO3 (ENSCJAG00000010459)	CD59 (ENSCJAG00000043097)	C11orf91 (ENSCJAG00000044908)	KIAA1549L (ENSCJAG00000010403)	HIPK3 (ENSCJAG00000010402)	CSTF3 (ENSCJAG00000005533)	TCP11L1 (ENSCJAG00000005638)	DEPDC7 (ENSCJAG00000005688)	QSER1 (ENSCJAG00000005754)	CCDC73 (ENSCJAG00000005803) #14	EIF3M (ENSCJAG00000005845) #16	WT1 (ENSCJAG00000005900) #19	RCN1 (ENSCJAG00000005925) #21	PAX6 (ENSCJAG00000005942) #22	ELP4 (ENSCJAG00000005994) #23	IMMP1L (ENSCJAG00000006042) #24	DNAJC24 (ENSCJAG00000067145) #25	ENSCJAG00000006055	ENSCJAG00000077881	ENSCJAG00000086423	ENSCJAG00000006060 #26	MPPED2 (ENSCJAG00000006095) #28	ARL14EP (ENSCJAG00000052482) #29	FSHB (ENSCJAG00000069180) #31	KCNA4 (ENSCJAG00000006129)	ENSCJAG00000071341	ENSCJAG00000077506	METTL15 (ENSCJAG00000042420)	KIF18A (ENSCJAG00000006149)
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Mouse lemur	MODERN SPECIES	27	LMO2 (ENSMICG00000027826)	FBXO3 (ENSMICG00000012713)	CD59 (ENSMICG00000037109)	C11orf91 (ENSMICG00000042497)	KIAA1549L (ENSMICG00000012651)	HIPK3 (ENSMICG00000038979)	CSTF3 (ENSMICG00000004784)	TCP11L1 (ENSMICG00000004776)	DEPDC7 (ENSMICG00000004770)	QSER1 (ENSMICG00000035367)	PRRG4 (ENSMICG00000046080)	CCDC73 (ENSMICG00000027398) #14	EIF3M (ENSMICG00000035817) #16	WT1 (ENSMICG00000004097) #19	RCN1 (ENSMICG00000027735) #21	PAX6 (ENSMICG00000004089) #22	ELP4 (ENSMICG00000031183) #23	ENSMICG00000030529 #24	DNAJC24 (ENSMICG00000035987) #25	ENSMICG00000007547	ENSMICG00000011555 #26	MPPED2 (ENSMICG00000033674) #28	ARL14EP (ENSMICG00000011547) #29	FSHB (ENSMICG00000011542) #31	METTL15 (ENSMICG00000005178)	KIF18A (ENSMICG00000005169)	BDNF (ENSMICG00000031803)	LIN7C (ENSMICG00000005165)	LGR4 (ENSMICG00000005157)	CCDC34 (ENSMICG00000005153)	BBOX1 (ENSMICG00000005143)
Lemuriformes_a	ANCESTRAL SPECIES	92	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000007888.c.b.e	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Greater bamboo lemur	MODERN SPECIES	280	LMO2 (ENSPSMG00000016253)	FBXO3 (ENSPSMG00000016164)	C11orf91 (ENSPSMG00000015950)	KIAA1549L (ENSPSMG00000015945)	HIPK3 (ENSPSMG00000015860)	CSTF3 (ENSPSMG00000015685)	TCP11L1 (ENSPSMG00000015633)	DEPDC7 (ENSPSMG00000015597)	ENSPSMG00000015560	PRRG4 (ENSPSMG00000015554)	CCDC73 (ENSPSMG00000015536) #14	EIF3M (ENSPSMG00000015489) #16	WT1 (ENSPSMG00000015310) #19	ENSPSMG00000015171 #20	RCN1 (ENSPSMG00000015166) #21	PAX6 (ENSPSMG00000014706) #22	ELP4 (ENSPSMG00000014343) #23	IMMP1L (ENSPSMG00000014225) #24	DNAJC24 (ENSPSMG00000014204) #25	DCDC1 (ENSPSMG00000014185)	MPPED2 (ENSPSMG00000014153) #28	ARL14EP (ENSPSMG00000014131) #29	ENSPSMG00000014117	FSHB (ENSPSMG00000014111) #31	ENSPSMG00000014098 #31	KCNA4 (ENSPSMG00000014085)	ENSPSMG00000014055	METTL15 (ENSPSMG00000014046)	KIF18A (ENSPSMG00000014031)	BDNF (ENSPSMG00000014018)	LIN7C (ENSPSMG00000013970)
Coquerels sifaka	MODERN SPECIES	425	C11orf91 (ENSPCOG00000023742)	KIAA1549L (ENSPCOG00000022400)	ENSPCOG00000018218	HIPK3 (ENSPCOG00000017859)	CSTF3 (ENSPCOG00000014417)	TCP11L1 (ENSPCOG00000027055)	DEPDC7 (ENSPCOG00000000072)	QSER1 (ENSPCOG00000015677)	ENSPCOG00000012591	PRRG4 (ENSPCOG00000017212)	CCDC73 (ENSPCOG00000019230) #14	EIF3M (ENSPCOG00000005374) #16	WT1 (ENSPCOG00000020436) #19	RCN1 (ENSPCOG00000028732) #21	ENSPCOG00000015851	PAX6 (ENSPCOG00000027283) #22	ELP4 (ENSPCOG00000026997) #23	IMMP1L (ENSPCOG00000013501) #24	DNAJC24 (ENSPCOG00000017556) #25	ENSPCOG00000025939	ENSPCOG00000027565	ENSPCOG00000020955 #26	MPPED2 (ENSPCOG00000021931) #28	ARL14EP (ENSPCOG00000022743) #29	FSHB (ENSPCOG00000018340) #31	ENSPCOG00000024624	METTL15 (ENSPCOG00000016394)	KIF18A (ENSPCOG00000021853)	BDNF (ENSPCOG00000004782)	LIN7C (ENSPCOG00000023241)	LGR4 (ENSPCOG00000027962)
Bushbaby	MODERN SPECIES	116	CAPRIN1 (ENSOGAG00000016733)	LMO2 (ENSOGAG00000014321)	FBXO3 (ENSOGAG00000014318)	CD59 (ENSOGAG00000003325)	C11orf91 (ENSOGAG00000033539)	KIAA1549L (ENSOGAG00000003316)	HIPK3 (ENSOGAG00000008857)	CSTF3 (ENSOGAG00000010229)	TCP11L1 (ENSOGAG00000003835)	DEPDC7 (ENSOGAG00000009992)	QSER1 (ENSOGAG00000034265)	CCDC73 (ENSOGAG00000033579) #14	EIF3M (ENSOGAG00000015913) #16	WT1 (ENSOGAG00000007118) #19	RCN1 (ENSOGAG00000007861) #21	PAX6 (ENSOGAG00000007857) #22	ELP4 (ENSOGAG00000007855) #23	IMMP1L (ENSOGAG00000007853) #24	DNAJC24 (ENSOGAG00000007848) #25	ENSOGAG00000007847	ENSOGAG00000012348 #26	MPPED2 (ENSOGAG00000008769) #28	ARL14EP (ENSOGAG00000008767) #29	ENSOGAG00000032601	ENSOGAG00000034776	FSHB (ENSOGAG00000013541) #31	KCNA4 (ENSOGAG00000033403)	ENSOGAG00000030085	METTL15 (ENSOGAG00000017074)	KIF18A (ENSOGAG00000017068)	BDNF (ENSOGAG00000017065)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Suina	ANCESTRAL SPECIES	34	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Pig	MODERN SPECIES	10	ENSSSCG00000024791	C11orf91 (ENSSSCG00000013310)	KIAA1549L (ENSSSCG00000013311)	HIPK3 (ENSSSCG00000013312)	CSTF3 (ENSSSCG00000040954)	TCP11L1 (ENSSSCG00000030326)	DEPDC7 (ENSSSCG00000042341)	QSER1 (ENSSSCG00000013314)	ENSSSCG00000042766	PRRG4 (ENSSSCG00000013313)	CCDC73 (ENSSSCG00000026433) #14	EIF3M (ENSSSCG00000013315) #16	WT1 (ENSSSCG00000013316) #19	ENSSSCG00000024950 #20	RCN1 (ENSSSCG00000013318) #21	PAX6 (ENSSSCG00000013320) #22	ELP4 (ENSSSCG00000013321) #23	ENSSSCG00000041609	IMMP1L (ENSSSCG00000013322) #24	ENSSSCG00000051332	DNAJC24 (ENSSSCG00000026083) #25	DCDC1 (ENSSSCG00000013326)	MPPED2 (ENSSSCG00000013327) #28	ENSSSCG00000059744	ARL14EP (ENSSSCG00000039889) #29	FSHB (ENSSSCG00000013328) #31	KCNA4 (ENSSSCG00000013330)	ENSSSCG00000034018	ENSSSCG00000057311	METTL15 (ENSSSCG00000013331)	KIF18A (ENSSSCG00000013332)
Chacoan peccary	MODERN SPECIES	919	FBXO3 (ENSCWAG00000021882)	ENSCWAG00000021889	C11orf91 (ENSCWAG00000021891)	KIAA1549L (ENSCWAG00000021895)	HIPK3 (ENSCWAG00000021902)	CSTF3 (ENSCWAG00000021904)	TCP11L1 (ENSCWAG00000021908)	DEPDC7 (ENSCWAG00000021910)	QSER1 (ENSCWAG00000021912)	PRRG4 (ENSCWAG00000021915)	ENSCWAG00000003968	EIF3M (ENSCWAG00000004093) #16	WT1 (ENSCWAG00000004225) #19	ENSCWAG00000004835 #20	RCN1 (ENSCWAG00000004859) #21	PAX6 (ENSCWAG00000004896) #22	ELP4 (ENSCWAG00000005199) #23	IMMP1L (ENSCWAG00000005301) #24	DNAJC24 (ENSCWAG00000005348) #25	DCDC1 (ENSCWAG00000005401)	MPPED2 (ENSCWAG00000005645) #28	ARL14EP (ENSCWAG00000005680) #29	FSHB (ENSCWAG00000005697) #31	KCNA4 (ENSCWAG00000005719)	METTL15 (ENSCWAG00000005746)	KIF18A (ENSCWAG00000005809)	BDNF (ENSCWAG00000005893)	LIN7C (ENSCWAG00000005940)	LGR4 (ENSCWAG00000006018)	CCDC34 (ENSCWAG00000006126)	BBOX1 (ENSCWAG00000006153)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Camelidae	ANCESTRAL SPECIES	25	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Arabian camel	MODERN SPECIES	1	LMO2 (ENSCDRG00005018050)	FBXO3 (ENSCDRG00005018128)	C11orf91 (ENSCDRG00005018309)	KIAA1549L (ENSCDRG00005018372)	HIPK3 (ENSCDRG00005018642)	CSTF3 (ENSCDRG00005018752)	TCP11L1 (ENSCDRG00005018903)	DEPDC7 (ENSCDRG00005018963)	QSER1 (ENSCDRG00005019019)	PRRG4 (ENSCDRG00005019080)	CCDC73 (ENSCDRG00005019107) #14	EIF3M (ENSCDRG00005019201) #16	WT1 (ENSCDRG00005019279) #19	RCN1 (ENSCDRG00005019463) #21	ENSCDRG00005019471	PAX6 (ENSCDRG00005019478) #22	ELP4 (ENSCDRG00005019564) #23	IMMP1L (ENSCDRG00005019972) #24	DNAJC24 (ENSCDRG00005020002) #25	DCDC1 (ENSCDRG00005020030)	MPPED2 (ENSCDRG00005020111) #28	ENSCDRG00005020118	ARL14EP (ENSCDRG00005020128) #29	FSHB (ENSCDRG00005020139) #31	KCNA4 (ENSCDRG00005020142)	METTL15 (ENSCDRG00005006592)	KIF18A (ENSCDRG00005006694)	BDNF (ENSCDRG00005006820)	LIN7C (ENSCDRG00005006857)	LGR4 (ENSCDRG00005006913)	CCDC34 (ENSCDRG00005006981)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000163780	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070.a.a	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.i #31	ENSGT00940000160051.j #31	ENSGT01100000263791.b.b	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070.a.a	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.i #31	ENSGT00940000160051.j #31	ENSGT01100000263791.b.b	ENSGT00940000162248	ENSGT00940000153112.E.f.a.a.b	ENSGT00390000014756	ENSGT00940000159058
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070.a.a	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.i #31	ENSGT00940000160051.j #31	ENSGT00940000162248	ENSGT00940000153112.E.f.a.a.b	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d
Dolphin	MODERN SPECIES	1855																PAX6 (ENSTTRG00000002399) #22	ELP4 (ENSTTRG00000002397) #23	IMMP1L (ENSTTRG00000002395) #24	DNAJC24 (ENSTTRG00000002394) #25
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070.a.a	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.i #31	ENSGT00940000160051.j #31	ENSGT00920000150779	ENSGT00940000162248	ENSGT00940000153112.E.f.a.a.b	ENSGT00390000014756	ENSGT00940000159058
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070.a.a	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.i #31	ENSGT00940000160051.j #31	ENSGT00920000150779	ENSGT00940000162248	ENSGT00940000153112.E.f.a.a.b	ENSGT00390000014756	ENSGT00940000159058
Beluga whale	MODERN SPECIES	32	CD59 (ENSDLEG00000013827)	CUNH11orf91 (ENSDLEG00000013835)	KIAA1549L (ENSDLEG00000013855)	HIPK3 (ENSDLEG00000013963)	CSTF3 (ENSDLEG00000014043)	TCP11L1 (ENSDLEG00000012541)	ENSDLEG00000012554	QSER1 (ENSDLEG00000012566)	PRRG4 (ENSDLEG00000012601)	ENSDLEG00000012608	CCDC73 (ENSDLEG00000012619) #14	EIF3M (ENSDLEG00000012638) #16	WT1 (ENSDLEG00000012678) #19	ENSDLEG00000013019 #20	RCN1 (ENSDLEG00000013030) #21	PAX6 (ENSDLEG00000013044) #22	ELP4 (ENSDLEG00000013063) #23	IMMP1L (ENSDLEG00000013097) #24	DNAJC24 (ENSDLEG00000013153) #25	ENSDLEG00000013169	ENSDLEG00000013195 #26	MPPED2 (ENSDLEG00000013211) #28	ARL14EP (ENSDLEG00000013227) #29	FSHB (ENSDLEG00000013233) #31	ENSDLEG00000013244 #31	ENSDLEG00000013251	KCNA4 (ENSDLEG00000013264)	ENSDLEG00000013268	METTL15 (ENSDLEG00000013273)	KIF18A (ENSDLEG00000013284)	BDNF (ENSDLEG00000013310)
Narwhal	MODERN SPECIES	314	ENSMMNG00015019816	C11orf91 (ENSMMNG00015019799)	KIAA1549L (ENSMMNG00015019709)	HIPK3 (ENSMMNG00015019654)	CSTF3 (ENSMMNG00015019509)	TCP11L1 (ENSMMNG00015019409)	DEPDC7 (ENSMMNG00015019350)	QSER1 (ENSMMNG00015019303)	PRRG4 (ENSMMNG00015019267)	CCDC73 (ENSMMNG00015019158) #14	EIF3M (ENSMMNG00015019072) #16	WT1 (ENSMMNG00015018931) #19	ENSMMNG00015018883 #20	RCN1 (ENSMMNG00015018866) #21	ENSMMNG00015018848	PAX6 (ENSMMNG00015018671) #22	ELP4 (ENSMMNG00015018589) #23	IMMP1L (ENSMMNG00015018519) #24	DNAJC24 (ENSMMNG00015018498) #25	DCDC1 (ENSMMNG00015018365)	MPPED2 (ENSMMNG00015018327) #28	ARL14EP (ENSMMNG00015018311) #29	ENSMMNG00015018295 #31	ENSMMNG00015018272 #31	ENSMMNG00015018261	KCNA4 (ENSMMNG00015018252)	ENSMMNG00015018239	METTL15 (ENSMMNG00015018201)	KIF18A (ENSMMNG00015018163)	BDNF (ENSMMNG00015018131)	LIN7C (ENSMMNG00015018084)
Vaquita	MODERN SPECIES	19	ENSPSNG00000017059	C11orf91 (ENSPSNG00000017031)	KIAA1549L (ENSPSNG00000016649)	HIPK3 (ENSPSNG00000016514)	CSTF3 (ENSPSNG00000016354)	TCP11L1 (ENSPSNG00000016253)	DEPDC7 (ENSPSNG00000016098)	ENSPSNG00000016011	QSER1 (ENSPSNG00000015773)	PRRG4 (ENSPSNG00000015680)	CCDC73 (ENSPSNG00000015385) #14	EIF3M (ENSPSNG00000015142) #16	WT1 (ENSPSNG00000014606) #19	ENSPSNG00000014483 #20	RCN1 (ENSPSNG00000014435) #21	PAX6 (ENSPSNG00000014287) #22	ELP4 (ENSPSNG00000014087) #23	IMMP1L (ENSPSNG00000013988) #24	DNAJC24 (ENSPSNG00000013881) #25	DCDC1 (ENSPSNG00000013124)	MPPED2 (ENSPSNG00000012995) #28	ARL14EP (ENSPSNG00000012948) #29	ENSPSNG00000012904 #31	ENSPSNG00000012858 #31	ENSPSNG00000012815	KCNA4 (ENSPSNG00000012793)	ENSPSNG00000012775	METTL15 (ENSPSNG00000012699)	KIF18A (ENSPSNG00000012649)	BDNF (ENSPSNG00000012544)	LIN7C (ENSPSNG00000012453)
Sperm whale	MODERN SPECIES	7	C16H11orf91 (ENSPCTG00005016629)	KIAA1549L (ENSPCTG00005016154)	HIPK3 (ENSPCTG00005016025)	CSTF3 (ENSPCTG00005015434)	TCP11L1 (ENSPCTG00005015340)	DEPDC7 (ENSPCTG00005015057)	QSER1 (ENSPCTG00005014791)	ENSPCTG00005014763	PRRG4 (ENSPCTG00005014722)	CCDC73 (ENSPCTG00005014445) #14	EIF3M (ENSPCTG00005014201) #16	WT1 (ENSPCTG00005013164) #19	ENSPCTG00005013102	RCN1 (ENSPCTG00005013063) #21	ENSPCTG00005013016	PAX6 (ENSPCTG00005012818) #22	ELP4 (ENSPCTG00005012607) #23	IMMP1L (ENSPCTG00005012491) #24	DNAJC24 (ENSPCTG00005012456) #25	ENSPCTG00005012428	ENSPCTG00005012234 #26	MPPED2 (ENSPCTG00005012156) #28	ARL14EP (ENSPCTG00005012121) #29	ENSPCTG00005012091 #31	ENSPCTG00005012055 #31	ENSPCTG00005012019	KCNA4 (ENSPCTG00005012001)	ENSPCTG00005011934	ENSPCTG00005011916	METTL15 (ENSPCTG00005011846)	KIF18A (ENSPCTG00005011764)
Blue whale	MODERN SPECIES	19	KIAA1549L (ENSBMSG00010012941)	HIPK3 (ENSBMSG00010012855)	CSTF3 (ENSBMSG00010012787)	TCP11L1 (ENSBMSG00010012759)	DEPDC7 (ENSBMSG00010012736)	QSER1 (ENSBMSG00010012662)	ENSBMSG00010012654	PRRG4 (ENSBMSG00010012641)	CCDC73 (ENSBMSG00010012604) #14	EIF3M (ENSBMSG00010012516) #16	WT1 (ENSBMSG00010012349) #19	ENSBMSG00010012175 #20	RCN1 (ENSBMSG00010012165) #21	ENSBMSG00010012155	ENSBMSG00010012144	PAX6 (ENSBMSG00010012125) #22	ELP4 (ENSBMSG00010012038) #23	IMMP1L (ENSBMSG00010012015) #24	DNAJC24 (ENSBMSG00010011989) #25	ENSBMSG00010011976	ENSBMSG00010011962	MPPED2 (ENSBMSG00010011950) #28	ARL14EP (ENSBMSG00010011941) #29	ENSBMSG00010011934 #31	ENSBMSG00010011925 #31	ENSBMSG00010011921	ENSBMSG00010011912	ENSBMSG00010011898	METTL15 (ENSBMSG00010011883)	KIF18A (ENSBMSG00010011866)	BDNF (ENSBMSG00010011855)
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000163780.f	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Yarkand deer	MODERN SPECIES		KIAA1549L (ENSCHYG00000009646)	HIPK3 (ENSCHYG00000009204)	ENSCHYG00000009147	CSTF3 (ENSCHYG00000008970)	ENSCHYG00000008683	ENSCHYG00000008592	ENSCHYG00000008567	ENSCHYG00000008538	ENSCHYG00000008528	ENSCHYG00000008509	EIF3M (ENSCHYG00000008430) #16	WT1 (ENSCHYG00000008206) #19	ENSCHYG00000008166 #20	RCN1 (ENSCHYG00000008136) #21	ENSCHYG00000008130	PAX6 (ENSCHYG00000007997) #22	ELP4 (ENSCHYG00000007588) #23	IMMP1L (ENSCHYG00000007517) #24	DNAJC24 (ENSCHYG00000007483) #25	DCDC1 (ENSCHYG00000007355)	MPPED2 (ENSCHYG00000007271) #28	ARL14EP (ENSCHYG00000007219) #29	ENSCHYG00000007199 #31	ENSCHYG00000007179	ENSCHYG00000007152 #31	KCNA4 (ENSCHYG00000007143)	ENSCHYG00000007126	ENSCHYG00000007105	METTL15 (ENSCHYG00000007039)	KIF18A (ENSCHYG00000006968)	ENSCHYG00000006950
Percora_a	ANCESTRAL SPECIES	6	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000163780.f	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Siberian musk deer	MODERN SPECIES	120	C11orf91 (ENSMMSG00000013918)	KIAA1549L (ENSMMSG00000013942)	HIPK3 (ENSMMSG00000014072)	CSTF3 (ENSMMSG00000014200)	TCP11L1 (ENSMMSG00000014300)	DEPDC7 (ENSMMSG00000014333)	QSER1 (ENSMMSG00000014389)	PRRG4 (ENSMMSG00000014458)	ENSMMSG00000014472	ENSMMSG00000014500 #16	WT1 (ENSMMSG00000014570) #19	ENSMMSG00000015458 #20	RCN1 (ENSMMSG00000015474) #21	ENSMMSG00000015505	ENSMMSG00000015522	PAX6 (ENSMMSG00000015559) #22	ELP4 (ENSMMSG00000015874) #23	IMMP1L (ENSMMSG00000016058) #24	DNAJC24 (ENSMMSG00000016096) #25	DCDC1 (ENSMMSG00000000163)	ENSMMSG00000000304	MPPED2 (ENSMMSG00000000323) #28	ENSMMSG00000000355 #29	FSH-beta (ENSMMSG00000000367) #31	ENSMMSG00000000378 #31	ENSMMSG00000000387	KCNA4 (ENSMMSG00000000397)	ENSMMSG00000000417	METTL15 (ENSMMSG00000000430)	KIF18A (ENSMMSG00000000456)	BDNF (ENSMMSG00000000511)
Bovidae	ANCESTRAL SPECIES	6	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000163780.f	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Bovinae	ANCESTRAL SPECIES	26	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586.i #29	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Bos	ANCESTRAL SPECIES	25	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586.i #29	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Bos_b	ANCESTRAL SPECIES	12	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586.i #29	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Hybrid Bos Indicus	MODERN SPECIES	6	KIAA1549L (ENSBIXG00005014441)	HIPK3 (ENSBIXG00005001887)	CSTF3 (ENSBIXG00005001866)	TCP11L1 (ENSBIXG00005014197)	DEPDC7 (ENSBIXG00005014101)	QSER1 (ENSBIXG00005014048)	PRRG4 (ENSBIXG00005013948)	CCDC73 (ENSBIXG00005013923) #14	EIF3M (ENSBIXG00005013861) #16	WT1 (ENSBIXG00005005394) #19	ENSBIXG00005013578	RCN1 (ENSBIXG00005013559) #21	ENSBIXG00005005392 #20	ENSBIXG00005001621	ELP4 (ENSBIXG00005013452) #23	PAX6 (ENSBIXG00005006118) #22	ENSBIXG00005013314	IMMP1L (ENSBIXG00005013302) #24	DNAJC24 (ENSBIXG00005013259) #25	DCDC1 (ENSBIXG00005005838)	MPPED2 (ENSBIXG00005012850) #28	ARL14EP (ENSBIXG00005012774) #29	FSHB (ENSBIXG00005012758) #31	KCNA4 (ENSBIXG00005012730)	METTL15 (ENSBIXG00005012653)	KIF18A (ENSBIXG00005006113)	BDNF (ENSBIXG00005012588)	LIN7C (ENSBIXG00005012533)	LGR4 (ENSBIXG00005001350)	CCDC34 (ENSBIXG00005012331)	BBOX1 (ENSBIXG00005000388)
Cow	MODERN SPECIES	6	C15H11orf91 (ENSBTAG00000027577)	KIAA1549L (ENSBTAG00000012846)	HIPK3 (ENSBTAG00000014884)	CSTF3 (ENSBTAG00000008617)	TCP11L1 (ENSBTAG00000008613)	DEPDC7 (ENSBTAG00000021809)	QSER1 (ENSBTAG00000014399)	PRRG4 (ENSBTAG00000020731)	ENSBTAG00000054030	ENSBTAG00000049128	EIF3M (ENSBTAG00000005338) #16	WT1 (ENSBTAG00000047268) #19	ENSBTAG00000052796 #20	RCN1 (ENSBTAG00000047362) #21	ENSBTAG00000052762	PAX6 (ENSBTAG00000004561) #22	ELP4 (ENSBTAG00000023831) #23	IMMP1L (ENSBTAG00000000475) #24	DNAJC24 (ENSBTAG00000050888) #25	DCDC1 (ENSBTAG00000006060)	MPPED2 (ENSBTAG00000020956) #28	ARL14EP (ENSBTAG00000012417) #29	FSHB (ENSBTAG00000010889) #31	KCNA4 (ENSBTAG00000020793)	METTL15 (ENSBTAG00000003361)	KIF18A (ENSBTAG00000002117)	BDNF (ENSBTAG00000008134)	LIN7C (ENSBTAG00000001460)	LGR4 (ENSBTAG00000002606)	CCDC34 (ENSBTAG00000021346)	BBOX1 (ENSBTAG00000014847)
Bos_a	ANCESTRAL SPECIES	36	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586.i #29	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Domestic yak	MODERN SPECIES	4	C11orf91 (ENSBGRG00000018630)	KIAA1549L (ENSBGRG00000018177)	HIPK3 (ENSBGRG00000018060)	CSTF3 (ENSBGRG00000017836)	TCP11L1 (ENSBGRG00000017489)	DEPDC7 (ENSBGRG00000017219)	ENSBGRG00000017187	QSER1 (ENSBGRG00000016588)	PRRG4 (ENSBGRG00000016489)	CCDC73 (ENSBGRG00000015692) #14	EIF3M (ENSBGRG00000015042) #16	ENSBGRG00000014974	WT1 (ENSBGRG00000014474) #19	ENSBGRG00000014411 #20	RCN1 (ENSBGRG00000014228) #21	PAX6 (ENSBGRG00000014058) #22	ELP4 (ENSBGRG00000012623) #23	IMMP1L (ENSBGRG00000012464) #24	DNAJC24 (ENSBGRG00000012396) #25	ENSBGRG00000012369	DCDC1 (ENSBGRG00000011881)	MPPED2 (ENSBGRG00000011746) #28	ENSBGRG00000011708 #29	ENSBGRG00000011682	FSHB (ENSBGRG00000011630) #31	KCNA4 (ENSBGRG00000011603)	METTL15 (ENSBGRG00000011464)	KIF18A (ENSBGRG00000011059)	BDNF (ENSBGRG00000010972)	LIN7C (ENSBGRG00000010637)	LGR4 (ENSBGRG00000020409)
Wild yak	MODERN SPECIES	353	ENSBMUG00000008356	C11orf91 (ENSBMUG00000008344)	KIAA1549L (ENSBMUG00000008324)	HIPK3 (ENSBMUG00000008279)	CSTF3 (ENSBMUG00000008244)	TCP11L1 (ENSBMUG00000008189)	DEPDC7 (ENSBMUG00000008168)	QSER1 (ENSBMUG00000008156)	PRRG4 (ENSBMUG00000008106)	ENSBMUG00000008082	ENSBMUG00000008058	EIF3M (ENSBMUG00000008048) #16	WT1 (ENSBMUG00000007876) #19	ENSBMUG00000007811 #20	ENSBMUG00000007800 #21	PAX6 (ENSBMUG00000007750) #22	ELP4 (ENSBMUG00000007669) #23	IMMP1L (ENSBMUG00000007643) #24	DNAJC24 (ENSBMUG00000007624) #25	ENSBMUG00000007617
American bison	MODERN SPECIES	3375	ENSBBBG00000012235	C11orf91 (ENSBBBG00000012241)	KIAA1549L (ENSBBBG00000002311)	HIPK3 (ENSBBBG00000012315)	CSTF3 (ENSBBBG00000012345)	TCP11L1 (ENSBBBG00000012359)	DEPDC7 (ENSBBBG00000012370)	QSER1 (ENSBBBG00000012381)	PRRG4 (ENSBBBG00000012387)	ENSBBBG00000012391	ENSBBBG00000002355	EIF3M (ENSBBBG00000012413) #16	WT1 (ENSBBBG00000012437) #19	ENSBBBG00000012441 #20	RCN1 (ENSBBBG00000012447) #21	PAX6 (ENSBBBG00000012730) #22	ELP4 (ENSBBBG00000012792) #23	IMMP1L (ENSBBBG00000002484) #24	DNAJC24 (ENSBBBG00000012813) #25	DCDC1 (ENSBBBG00000007887)	MPPED2 (ENSBBBG00000002499) #28	ARL14EP (ENSBBBG00000002503) #29	FSHB (ENSBBBG00000002507) #31	KCNA4 (ENSBBBG00000012840)	METTL15 (ENSBBBG00000002523)	KIF18A (ENSBBBG00000002525)	BDNF (ENSBBBG00000012862)	LIN7C (ENSBBBG00000012875)	LGR4 (ENSBBBG00000002549)	CCDC34 (ENSBBBG00000012927)	BBOX1 (ENSBBBG00000012954)
Caprinae	ANCESTRAL SPECIES	6	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000163780.f	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051.f #31	ENSGT00940000160051.e #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Goat	MODERN SPECIES	6	C11orf91 (ENSCHIG00000020265)	KIAA1549L (ENSCHIG00000010337)	HIPK3 (ENSCHIG00000022013)	CSTF3 (ENSCHIG00000016418)	TCP11L1 (ENSCHIG00000020989)	DEPDC7 (ENSCHIG00000027218)	QSER1 (ENSCHIG00000016327)	ENSCHIG00000025170	PRRG4 (ENSCHIG00000018240)	CCDC73 (ENSCHIG00000020414) #14	ENSCHIG00000012027 #16	WT1 (ENSCHIG00000013048) #19	ENSCHIG00000026487 #20	RCN1 (ENSCHIG00000012978) #21	ENSCHIG00000019255	PAX6 (ENSCHIG00000023363) #22	ELP4 (ENSCHIG00000011057) #23	ENSCHIG00000011052 #24	DNAJC24 (ENSCHIG00000013207) #25	ENSCHIG00000013608	ENSCHIG00000013622 #26	ENSCHIG00000025035	MPPED2 (ENSCHIG00000017309) #28	ENSCHIG00000020151	ARL14EP (ENSCHIG00000024817) #29	FSHB (ENSCHIG00000022859) #31	ENSCHIG00000023477 #31	KCNA4 (ENSCHIG00000001648)	METTL15 (ENSCHIG00000018028)	KIF18A (ENSCHIG00000002772)	BDNF (ENSCHIG00000006804)
Rambouillet Sheep	MODERN SPECIES	6	CD59 (ENSOARG00020011000)	C11orf91 (ENSOARG00020010944)	KIAA1549L (ENSOARG00020010529)	HIPK3 (ENSOARG00020010376)	CSTF3 (ENSOARG00020009771)	TCP11L1 (ENSOARG00020009692)	DEPDC7 (ENSOARG00020009610)	QSER1 (ENSOARG00020009269)	ENSOARG00020009223	PRRG4 (ENSOARG00020009169)	EIF3M (ENSOARG00020009058) #16	WT1 (ENSOARG00020008054) #19	ENSOARG00020007984 #20	RCN1 (ENSOARG00020007939) #21	ENSOARG00020007894	PAX6 (ENSOARG00020007805) #22	ELP4 (ENSOARG00020011687) #23	IMMP1L (ENSOARG00020011578) #24	DNAJC24 (ENSOARG00020011539) #25	MPPED2 (ENSOARG00020011431) #28	ARL14EP (ENSOARG00020011384) #29	FSHB (ENSOARG00020011317) #31	ENSOARG00020011265 #31	ENSOARG00020011223	ENSOARG00020011181	ENSOARG00020011133	ENSOARG00020011107	ENSOARG00020011041	ENSOARG00020011017	ENSOARG00020010964	ENSOARG00020010947
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Carnivora	ANCESTRAL SPECIES	7	ENSGT00530000063472.b.b.a.b	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Felidae	ANCESTRAL SPECIES		ENSGT00530000063472.b.b.a.b	ENSGT00390000008610.a.b.a.a.a.a.b	ENSGT00940000155960.b	ENSGT00390000015489.r	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000002517.a.b.a	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Cat	MODERN SPECIES	241	KIAA1549L (ENSFCAG00000010134)	ENSFCAG00000048892	HIPK3 (ENSFCAG00000023639)	ENSFCAG00000045275	CSTF3 (ENSFCAG00000030711)	TCP11L1 (ENSFCAG00000026555)	DEPDC7 (ENSFCAG00000032004)	QSER1 (ENSFCAG00000015204)	PRRG4 (ENSFCAG00000015202)	CCDC73 (ENSFCAG00000025569) #14	EIF3M (ENSFCAG00000000310) #16	WT1 (ENSFCAG00000000308) #19	ENSFCAG00000035821 #20	RCN1 (ENSFCAG00000029294) #21	ENSFCAG00000051580	PAX6 (ENSFCAG00000038150) #22	ELP4 (ENSFCAG00000030334) #23	IMMP1L (ENSFCAG00000028332) #24	DNAJC24 (ENSFCAG00000024845) #25	DCDC1 (ENSFCAG00000007915)	MPPED2 (ENSFCAG00000001706) #28	ARL14EP (ENSFCAG00000032975) #29	FSHB (ENSFCAG00000014631) #31	KCNA4 (ENSFCAG00000031951)	ENSFCAG00000006977	METTL15 (ENSFCAG00000025955)	KIF18A (ENSFCAG00000010217)	BDNF (ENSFCAG00000043571)	LIN7C (ENSFCAG00000034804)	LGR4 (ENSFCAG00000004891)	CCDC34 (ENSFCAG00000036696)
Panthera	ANCESTRAL SPECIES	13	ENSGT00990000213820	ENSGT00940000155960.b	ENSGT00390000015489.r	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000002517.a.b.a	ENSGT00390000014756	ENSGT00940000159058	ENSGT00930000152872	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Tiger	MODERN SPECIES	167	FBXO3 (ENSPTIG00000009375)	ENSPTIG00000009249	C11orf91 (ENSPTIG00000009247)	KIAA1549L (ENSPTIG00000008984)	HIPK3 (ENSPTIG00000008849)	CSTF3 (ENSPTIG00000008716)	TCP11L1 (ENSPTIG00000008558)	DEPDC7 (ENSPTIG00000008465)	QSER1 (ENSPTIG00000008208)	PRRG4 (ENSPTIG00000008151)	ENSPTIG00000008134	EIF3M (ENSPTIG00000007758) #16	WT1 (ENSPTIG00000007474) #19	ENSPTIG00000007330 #20	RCN1 (ENSPTIG00000007248) #21	PAX6 (ENSPTIG00000006031) #22	ELP4 (ENSPTIG00000004445) #23	IMMP1L (ENSPTIG00000003292) #24	DNAJC24 (ENSPTIG00000002139) #25	ENSPTIG00000001756	DCDC1 (ENSPTIG00000021226)	MPPED2 (ENSPTIG00000021157) #28	ARL14EP (ENSPTIG00000021117) #29	FSHB (ENSPTIG00000021036) #31
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00390000008610.a.b.a.a.a.a.b	ENSGT00990000213820	ENSGT00940000155960.b	ENSGT00390000015489.r	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000002517.a.b.a	ENSGT00390000014756	ENSGT00940000159058	ENSGT00930000152872	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
lion	MODERN SPECIES	10	KIAA1549L (ENSPLOG00000006130)	ENSPLOG00000006097	HIPK3 (ENSPLOG00000006037)	ENSPLOG00000005985	CSTF3 (ENSPLOG00000005926)	TCP11L1 (ENSPLOG00000005895)	DEPDC7 (ENSPLOG00000005856)	QSER1 (ENSPLOG00000005797)	PRRG4 (ENSPLOG00000005765)	CCDC73 (ENSPLOG00000005703) #14	EIF3M (ENSPLOG00000005645) #16	WT1 (ENSPLOG00000005490) #19	ENSPLOG00000005418 #20	ENSPLOG00000005402	RCN1 (ENSPLOG00000005388) #21	PAX6 (ENSPLOG00000005308) #22	ELP4 (ENSPLOG00000005266) #23	IMMP1L (ENSPLOG00000005227) #24	DNAJC24 (ENSPLOG00000005210) #25	DCDC1 (ENSPLOG00000005173)	MPPED2 (ENSPLOG00000005138) #28	ARL14EP (ENSPLOG00000005127) #29	FSHB (ENSPLOG00000005118) #31	KCNA4 (ENSPLOG00000005109)	ENSPLOG00000005087	METTL15 (ENSPLOG00000005061)	KIF18A (ENSPLOG00000005037)	ENSPLOG00000004982	BDNF (ENSPLOG00000004957)	LGR4 (ENSPLOG00000021734)	CCDC34 (ENSPLOG00000021675)
leopard	MODERN SPECIES	29	ENSPPRG00000013781	HIPK3 (ENSPPRG00000014334)	ENSPPRG00000014735	CSTF3 (ENSPPRG00000016852)	TCP11L1 (ENSPPRG00000018130)	DEPDC7 (ENSPPRG00000019342)	QSER1 (ENSPPRG00000024581)	PRRG4 (ENSPPRG00000024458)	ENSPPRG00000024407	ENSPPRG00000024223	EIF3M (ENSPPRG00000024020) #16	WT1 (ENSPPRG00000022915) #19	ENSPPRG00000022641 #20	ENSPPRG00000000227	RCN1 (ENSPPRG00000000429) #21	PAX6 (ENSPPRG00000008832) #22	ELP4 (ENSPPRG00000013059) #23	IMMP1L (ENSPPRG00000014913) #24	DNAJC24 (ENSPPRG00000020110) #25	ENSPPRG00000020286	DCDC1 (ENSPPRG00000000758)	MPPED2 (ENSPPRG00000002081) #28	ARL14EP (ENSPPRG00000002303) #29	FSHB (ENSPPRG00000002537) #31	KCNA4 (ENSPPRG00000015146)	METTL15 (ENSPPRG00000003466)	KIF18A (ENSPPRG00000004106)	ENSPPRG00000004181	BDNF (ENSPPRG00000005556)	LIN7C (ENSPPRG00000006231)	LGR4 (ENSPPRG00000007559)
Caniformia	ANCESTRAL SPECIES	25	ENSGT00530000063472.b.b.a.b	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Canidae	ANCESTRAL SPECIES	32	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a.d #28	ENSGT00940000156586 #29	ENSGT01060000248581.A.a.a.b.a.a.a	ENSGT01060000248581.A.a.a.b.b	ENSGT01060000248581.A.a.a.b.a.b	ENSGT01060000248581.A.a.a.b.a.a.b	ENSGT00520000055649.a	ENSGT00940000156164	ENSGT00940000165220	ENSGT00940000164403	ENSGT00940000163523
Red fox	MODERN SPECIES	94	C11orf91 (ENSVVUG00000014887)	KIAA1549L (ENSVVUG00000014889)	HIPK3 (ENSVVUG00000014907)	CSTF3 (ENSVVUG00000014938)	TCP11L1 (ENSVVUG00000016160)	DEPDC7 (ENSVVUG00000016168)	QSER1 (ENSVVUG00000016190)	PRRG4 (ENSVVUG00000016211)	CCDC73 (ENSVVUG00000016222) #14	EIF3M (ENSVVUG00000016291) #16	WT1 (ENSVVUG00000016328) #19	ENSVVUG00000016450 #20	ENSVVUG00000016451 #21	ENSVVUG00000016460	ENSVVUG00000016473	PAX6 (ENSVVUG00000016482) #22	ELP4 (ENSVVUG00000016492) #23	IMMP1L (ENSVVUG00000016517) #24	DNAJC24 (ENSVVUG00000016533) #25	DCDC1 (ENSVVUG00000016561)	MPPED2 (ENSVVUG00000016635) #28	ARL14EP (ENSVVUG00000016639) #29	ENSVVUG00000016643	ENSVVUG00000016645	OR10V1 (ENSVVUG00000016647)	ENSVVUG00000016653	PATL1 (ENSVVUG00000016668)	OSBP (ENSVVUG00000016806)	ENSVVUG00000016920	OR4D9 (ENSVVUG00000016923)	OR4D11 (ENSVVUG00000016934)
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a.c #28	ENSGT00390000007681.a.d #28	ENSGT00940000156586 #29	ENSGT01060000248581.A.a.a.b.a.a.a	ENSGT01060000248581.A.a.a.b.b	ENSGT01060000248581.A.a.a.b.a.b	ENSGT01060000248581.A.a.a.b.a.a.b	ENSGT00520000055649.a	ENSGT00940000156164	ENSGT00940000165220
Dingo	MODERN SPECIES	69	KIAA1549L (ENSCAFG00020004434)	ENSCAFG00020004425	ENSCAFG00020004418	HIPK3 (ENSCAFG00020003548)	CSTF3 (ENSCAFG00020002715)	TCP11L1 (ENSCAFG00020002659)	DEPDC7 (ENSCAFG00020002651)	QSER1 (ENSCAFG00020002643)	PRRG4 (ENSCAFG00020002639)	ENSCAFG00020002628	EIF3M (ENSCAFG00020002623) #16	WT1 (ENSCAFG00020002366) #19	ENSCAFG00020002349 #20	RCN1 (ENSCAFG00020002342) #21	ENSCAFG00020002338	PAX6 (ENSCAFG00020002118) #22	ELP4 (ENSCAFG00020002097) #23	IMMP1L (ENSCAFG00020002087) #24	DNAJC24 (ENSCAFG00020002081) #25	ENSCAFG00020002073	ENSCAFG00020002035 #26	ENSCAFG00020002028 #28	MPPED2 (ENSCAFG00020002024) #28	ARL14EP (ENSCAFG00020002022) #29	ENSCAFG00020002011	ENSCAFG00020002007	OR10V1 (ENSCAFG00020002002)	ENSCAFG00020001988	PATL1 (ENSCAFG00020001648)	OSBP (ENSCAFG00020001363)	ENSCAFG00020001346
Dog	MODERN SPECIES	9	KIAA1549L (ENSCAFG00845025341)	ENSCAFG00845025562	HIPK3 (ENSCAFG00845025615)	CSTF3 (ENSCAFG00845026044)	TCP11L1 (ENSCAFG00845026199)	ENSCAFG00845026364	DEPDC7 (ENSCAFG00845026430)	QSER1 (ENSCAFG00845026553)	PRRG4 (ENSCAFG00845026825)	CCDC73 (ENSCAFG00845026876) #14	EIF3M (ENSCAFG00845027029) #16	WT1 (ENSCAFG00845027359) #19	ENSCAFG00845027468 #20	RCN1 (ENSCAFG00845027499) #21	ENSCAFG00845027550	PAX6 (ENSCAFG00845027665) #22	DNAJC24 (ENSCAFG00845028184) #23	IMMP1L (ENSCAFG00845028483) #24	DCDC1 (ENSCAFG00845028783)	ENSCAFG00845029393	MPPED2 (ENSCAFG00845029423) #28	ARL14EP (ENSCAFG00845016706) #29	ENSCAFG00845016748	ENSCAFG00845016778	OR10V1 (ENSCAFG00845016830)	OR10V4 (ENSCAFG00845016884)	PATL1 (ENSCAFG00845016925)	OSBP (ENSCAFG00845017001)	OR4D9D (ENSCAFG00845017092)	OR4D9 (ENSCAFG00845017124)	ENSCAFG00845017153
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456.j #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Ursus	ANCESTRAL SPECIES	69	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456.j #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000165785	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
American black bear	MODERN SPECIES	678													ENSUAMG00000000461 #20	ENSUAMG00000000458 #21	ENSUAMG00000000377	ENSUAMG00000000105 #22
Polar bear	MODERN SPECIES	141	FBXO3 (ENSUMAG00000018845)	ENSUMAG00000018860	KIAA1549L (ENSUMAG00000018865)	HIPK3 (ENSUMAG00000018921)	CSTF3 (ENSUMAG00000018971)	TCP11L1 (ENSUMAG00000019415)	DEPDC7 (ENSUMAG00000019420)	QSER1 (ENSUMAG00000019428)	PRRG4 (ENSUMAG00000019477)	ENSUMAG00000019484	ENSUMAG00000019488 #14	EIF3M (ENSUMAG00000019493) #16	WT1 (ENSUMAG00000019514) #19	ENSUMAG00000019525 #20	RCN1 (ENSUMAG00000019528) #21	PAX6 (ENSUMAG00000019552) #22	ELP4 (ENSUMAG00000019620) #23	IMMP1L (ENSUMAG00000019633) #24	DNAJC24 (ENSUMAG00000019635) #25	ENSUMAG00000019640	ENSUMAG00000019643	ENSUMAG00000019647 #26	MPPED2 (ENSUMAG00000019653) #28	ARL14EP (ENSUMAG00000019655) #29	FSHB (ENSUMAG00000019657) #31	KCNA4 (ENSUMAG00000019660)	METTL15 (ENSUMAG00000019671)	KIF18A (ENSUMAG00000019675)	LIN7C (ENSUMAG00000019709)	LGR4 (ENSUMAG00000019714)	ENSUMAG00000019734
Giant Panda	MODERN SPECIES	7	C11orf91 (ENSAMEG00000007331)	KIAA1549L (ENSAMEG00000007317)	HIPK3 (ENSAMEG00000007251)	CSTF3 (ENSAMEG00000007187)	TCP11L1 (ENSAMEG00000007130)	DEPDC7 (ENSAMEG00000007096)	QSER1 (ENSAMEG00000007081)	PRRG4 (ENSAMEG00000025563)	ENSAMEG00000025855	ENSAMEG00000025566	ENSAMEG00000007045 #14	EIF3M (ENSAMEG00000007020) #16	WT1 (ENSAMEG00000006957) #19	ENSAMEG00000006954 #20	ENSAMEG00000006937 #21	PAX6 (ENSAMEG00000006908) #22	ELP4 (ENSAMEG00000006893) #23	IMMP1L (ENSAMEG00000006876) #24	DNAJC24 (ENSAMEG00000006875) #25	DCDC1 (ENSAMEG00000003642)	MPPED2 (ENSAMEG00000003656) #28	ARL14EP (ENSAMEG00000030847) #29	FSHB (ENSAMEG00000030112) #31	KCNA4 (ENSAMEG00000015827)	METTL15 (ENSAMEG00000014575)	KIF18A (ENSAMEG00000014549)	BDNF (ENSAMEG00000014544)	LIN7C (ENSAMEG00000014531)	LGR4 (ENSAMEG00000014496)	CCDC34 (ENSAMEG00000014485)	BBOX1 (ENSAMEG00000014478)
Mustelinae	ANCESTRAL SPECIES	30	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Ferret	MODERN SPECIES	213	LMO2 (ENSMPUG00000011529)	FBXO3 (ENSMPUG00000011527)	ENSMPUG00000011525	KIAA1549L (ENSMPUG00000011479)	HIPK3 (ENSMPUG00000011469)	CSTF3 (ENSMPUG00000011457)	TCP11L1 (ENSMPUG00000011348)	DEPDC7 (ENSMPUG00000011342)	QSER1 (ENSMPUG00000011334)	PRRG4 (ENSMPUG00000011329)	CCDC73 (ENSMPUG00000011318) #14	EIF3M (ENSMPUG00000011311) #16	WT1 (ENSMPUG00000011307) #19	ENSMPUG00000011303 #20	RCN1 (ENSMPUG00000011298) #21	PAX6 (ENSMPUG00000011295) #22	ELP4 (ENSMPUG00000011290) #23	IMMP1L (ENSMPUG00000011284) #24	DNAJC24 (ENSMPUG00000011280) #25	DCDC1 (ENSMPUG00000011258)	ENSMPUG00000011248	MPPED2 (ENSMPUG00000011240) #28	ARL14EP (ENSMPUG00000011235) #29	FSHB (ENSMPUG00000011223) #31	KCNA4 (ENSMPUG00000019959)	METTL15 (ENSMPUG00000011218)	KIF18A (ENSMPUG00000011209)	BDNF (ENSMPUG00000011206)	LIN7C (ENSMPUG00000011201)	LGR4 (ENSMPUG00000011192)	CCDC34 (ENSMPUG00000011177)
American mink	MODERN SPECIES	151		ENSNVIG00000004263	HIPK3 (ENSNVIG00000004290)	CSTF3 (ENSNVIG00000004364)	TCP11L1 (ENSNVIG00000004458)	DEPDC7 (ENSNVIG00000004469)	QSER1 (ENSNVIG00000004484)	PRRG4 (ENSNVIG00000004513)	CCDC73 (ENSNVIG00000004533) #14	EIF3M (ENSNVIG00000004595) #16	WT1 (ENSNVIG00000004664) #19	ENSNVIG00000004794 #20	RCN1 (ENSNVIG00000004807) #21	ENSNVIG00000004817	ENSNVIG00000004822	PAX6 (ENSNVIG00000004848) #22	ELP4 (ENSNVIG00000005118) #23	ENSNVIG00000005197 #24	DNAJC24 (ENSNVIG00000005225) #25	ENSNVIG00000005251	DCDC1 (ENSNVIG00000005262)	MPPD2 (ENSNVIG00000005372) #28	ARL14EP (ENSNVIG00000005391) #29	FSHB (ENSNVIG00000005394) #31	KCNA4 (ENSNVIG00000005408)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Greater horseshoe bat	MODERN SPECIES	2	C11orf91 (ENSRFEG00010005190)	KIAA1549L (ENSRFEG00010005232)	HIPK3 (ENSRFEG00010005299)	ENSRFEG00010005340	CSTF3 (ENSRFEG00010005374)	TCP11L1 (ENSRFEG00010005436)	DEPDC7 (ENSRFEG00010005465)	QSER1 (ENSRFEG00010005548)	PRRG4 (ENSRFEG00010005637)	ENSRFEG00010005674	CCDC73 (ENSRFEG00010005732) #14	EIF3M (ENSRFEG00010005855) #16	WT1 (ENSRFEG00010006043) #19	ENSRFEG00010006334 #20	RCN1 (ENSRFEG00010006353) #21	PAX6 (ENSRFEG00010006431) #22	ELP4 (ENSRFEG00010006621) #23	IMMP1L (ENSRFEG00010006767) #24	DNAJC24 (ENSRFEG00010006881) #25	DCDC1 (ENSRFEG00010006973)	MPPED2 (ENSRFEG00010010324) #28	ENSRFEG00010010397 #29	FSHB (ENSRFEG00010010479) #31	KCNA4 (ENSRFEG00010010528)	METTL15 (ENSRFEG00010010548)	KIF18A (ENSRFEG00010010630)	BDNF (ENSRFEG00010010710)	LIN7C (ENSRFEG00010010811)	LGR4 (ENSRFEG00010010922)	CCDC34 (ENSRFEG00010011266)	BBOX1 (ENSRFEG00010011317)
Microbat	MODERN SPECIES	1029					MS4A5 (ENSMLUG00000006587)	MS4A1 (ENSMLUG00000017521)	MS4A13 (ENSMLUG00000002656)	ENSMLUG00000009884	ENSMLUG00000029088	ENSMLUG00000023840	ENSMLUG00000024090	CCDC73 (ENSMLUG00000027187) #14	EIF3M (ENSMLUG00000014727) #16	WT1 (ENSMLUG00000027523) #19	RCN1 (ENSMLUG00000009140) #21	PAX6 (ENSMLUG00000006517) #22	ELP4 (ENSMLUG00000006507) #23	ENSMLUG00000006504 #24	DNAJC24 (ENSMLUG00000006498) #25	ENSMLUG00000012298 #26	ENSMLUG00000012290 #28	ARL14EP (ENSMLUG00000012286) #29	FSHB (ENSMLUG00000015565) #31	KCNA4 (ENSMLUG00000015561)	ENSMLUG00000023302	ENSMLUG00000010965	METTL15 (ENSMLUG00000029456)	KIF18A (ENSMLUG00000003355)	BDNF (ENSMLUG00000015937)	LIN7C (ENSMLUG00000015928)	LGR4 (ENSMLUG00000015911)
Megabat	MODERN SPECIES	2881																PAX6 (ENSPVAG00000015538) #22	ENSPVAG00000015537 #23	IMMP1L (ENSPVAG00000015535) #24	DNAJC24 (ENSPVAG00000015534) #25	ENSPVAG00000015533
Equus	ANCESTRAL SPECIES	40									ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00410000028070	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163628	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Donkey	MODERN SPECIES	12					ENSEASG00005026387	ENSEASG00005030749	ENSEASG00005028007	ENSEASG00005037903	ENSEASG00005013549	PRRG4 (ENSEASG00005028992)	CCDC73 (ENSEASG00005013539) #14	EIF3M (ENSEASG00005013531) #16	WT1 (ENSEASG00005013477) #19	RCN1 (ENSEASG00005013468) #21	ENSEASG00005034648	PAX6 (ENSEASG00005013453) #22	ELP4 (ENSEASG00005013447) #23	IMMP1L (ENSEASG00005013445) #24	DNAJC24 (ENSEASG00005031202) #25	DCDC1 (ENSEASG00005013436)	MPPED2 (ENSEASG00005013433) #28	ARL14EP (ENSEASG00005013428) #29	ENSEASG00005013426 #31	ENSEASG00005029412 #31	KCNA4 (ENSEASG00005036876)	METTL15 (ENSEASG00005013417)	KIF18A (ENSEASG00005013406)	BDNF (ENSEASG00005013402)	LIN7C (ENSEASG00005023753)	LGR4 (ENSEASG00005013389)	CCDC34 (ENSEASG00005013386)
Horse	MODERN SPECIES	28									QSER1 (ENSECAG00000007655)	PRRG4 (ENSECAG00000006554)	EIF3M (ENSECAG00000022640) #16	CCDC73 (ENSECAG00000006204) #14	WT1 (ENSECAG00000022308) #19	ENSECAG00000033892	RCN1 (ENSECAG00000022068) #21	PAX6 (ENSECAG00000021000) #22	ELP4 (ENSECAG00000020658) #23	IMMP1L (ENSECAG00000020512) #24	DNAJC24 (ENSECAG00000020499) #25	DCDC1 (ENSECAG00000020002)	MPPED2 (ENSECAG00000019460) #28	ARL14EP (ENSECAG00000019214) #29	ENSECAG00000052220	FSHB (ENSECAG00000019116) #31	ENSECAG00000019113 #31	KCNA4 (ENSECAG00000005252)	METTL15 (ENSECAG00000018326)	KIF18A (ENSECAG00000016155)	BDNF (ENSECAG00000015952)	LIN7C (ENSECAG00000015795)	LGR4 (ENSECAG00000013111)
Eulipotyphla	ANCESTRAL SPECIES	1005																ENSGT00940000155391.a #22	ENSGT00390000001443 #23
Common shrew	MODERN SPECIES	789																PAX6 (ENSSARG00000011424) #22	ELP4 (ENSSARG00000011414) #23
Hedgehog	MODERN SPECIES	1252																PAX6 (ENSEEUG00000014014) #22	ENSEEUG00000013872 #23
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00940000153438.a	ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00940000153438.a	ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271
Elephant	MODERN SPECIES	209	LMO2 (ENSLAFG00000008865)	ENSLAFG00000026975	FBXO3 (ENSLAFG00000004396)	C11orf91 (ENSLAFG00000006492)	KIAA1549L (ENSLAFG00000022670)	HIPK3 (ENSLAFG00000013962)	CSTF3 (ENSLAFG00000008712)	TCP11L1 (ENSLAFG00000008708)	DEPDC7 (ENSLAFG00000008704)	QSER1 (ENSLAFG00000029805)	PRRG4 (ENSLAFG00000005201)	CCDC73 (ENSLAFG00000009655) #14	EIF3M (ENSLAFG00000021669) #16	WT1 (ENSLAFG00000006160) #19	RCN1 (ENSLAFG00000010550) #21	PAX6 (ENSLAFG00000015520) #22	ELP4 (ENSLAFG00000011437) #23	ENSLAFG00000013448 #24	ENSLAFG00000001535	ENSLAFG00000032554	MPPED2 (ENSLAFG00000001426) #28	ARL14EP (ENSLAFG00000018240) #29	FSHB (ENSLAFG00000013498) #31	KCNA4 (ENSLAFG00000015672)	METTL15 (ENSLAFG00000014663)	KIF18A (ENSLAFG00000011529)	BDNF (ENSLAFG00000008144)	LIN7C (ENSLAFG00000010063)	LGR4 (ENSLAFG00000002256)	ENSLAFG00000021531	BBOX1 (ENSLAFG00000018069)
Hyrax	MODERN SPECIES	910																PAX6 (ENSPCAG00000005165) #22	ENSPCAG00000005064 #23
Tenrec	MODERN SPECIES	8776																PAX6 (ENSETEG00000002655) #22
Xenarthra	ANCESTRAL SPECIES	30	ENSGT00940000153438.a	ENSGT00940000160199	ENSGT00940000153571.b	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT00730000111983 #20	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00390000016867	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31
Sloth	MODERN SPECIES	996																ENSCHOG00000001954 #22	ELP4 (ENSCHOG00000001945) #23
Armadillo	MODERN SPECIES	307	LMO2 (ENSDNOG00000032989)	FBXO3 (ENSDNOG00000006486)	C11orf91 (ENSDNOG00000048791)	KIAA1549L (ENSDNOG00000014287)	HIPK3 (ENSDNOG00000018007)	CSTF3 (ENSDNOG00000007366)	TCP11L1 (ENSDNOG00000012436)	QSER1 (ENSDNOG00000046771)	PRRG4 (ENSDNOG00000025156)	CCDC73 (ENSDNOG00000012922) #14	EIF3M (ENSDNOG00000012904) #16	ENSDNOG00000048344	WT1 (ENSDNOG00000003652) #19	ENSDNOG00000045369 #20	ENSDNOG00000044782 #21	PAX6 (ENSDNOG00000000761) #22	ELP4 (ENSDNOG00000000757) #23	ENSDNOG00000035466 #24	DNAJC24 (ENSDNOG00000013512) #25	ENSDNOG00000018185	ENSDNOG00000034870	ENSDNOG00000041374 #26	MPPED2 (ENSDNOG00000047492) #28	ENSDNOG00000043073	ARL14EP (ENSDNOG00000048452) #29	FSHB (ENSDNOG00000014139) #31
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b.a	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b.a	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b
Diprotodontia	ANCESTRAL SPECIES	46	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b.a	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248
Diprotodontia_a	ANCESTRAL SPECIES	46	ENSGT00940000153571.b	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b.a	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT00940000164881	ENSGT00390000013482 #14	ENSGT00390000004456 #16	ENSGT00940000156734 #19	ENSGT01010000222360.D.b #21	ENSGT00940000155391.a #22	ENSGT00390000001443 #23	ENSGT00550000075025 #24	ENSGT00390000005430 #25	ENSGT00940000163542 #26	ENSGT00390000007681.a #28	ENSGT00940000156586 #29	ENSGT00940000160051 #31	ENSGT00940000162248
Common wonbat	MODERN SPECIES	1058	LMO2 (ENSVURG00010012705)	FBXO3 (ENSVURG00010012709)	ENSVURG00010012719	KIAA1549L (ENSVURG00010012738)	HIPK3 (ENSVURG00010012975)	ENSVURG00010013024	TCP11L1 (ENSVURG00010013070)	DEPDC7 (ENSVURG00010013084)	QSER1 (ENSVURG00010013101)	PRRG4 (ENSVURG00010013112)	ENSVURG00010013117	EIF3M (ENSVURG00010013122) #16	WT1 (ENSVURG00010013148) #19	RCN1 (ENSVURG00010013320) #21	ENSVURG00010013326	PAX6 (ENSVURG00010013364) #22	ELP4 (ENSVURG00010014242) #23	IMMP1L (ENSVURG00010014340) #24	DNAJC24 (ENSVURG00010014357) #25	ENSVURG00010014371	MPPED2 (ENSVURG00010014383) #28	ARL14EP (ENSVURG00010014405) #29	FSHB (ENSVURG00010014414) #31	KCNA4 (ENSVURG00010014424)
koala	MODERN SPECIES	148	FBXO3 (ENSPCIG00000026386)	ENSPCIG00000031932	C11orf91 (ENSPCIG00000026389)	KIAA1549L (ENSPCIG00000026390)	HIPK3 (ENSPCIG00000026397)	ENSPCIG00000026406	TCP11L1 (ENSPCIG00000033301)	DEPDC7 (ENSPCIG00000009976)	QSER1 (ENSPCIG00000024688)	PRRG4 (ENSPCIG00000024686)	ENSPCIG00000004235	ENSPCIG00000004250 #14	ENSPCIG00000004258 #16	WT1 (ENSPCIG00000034617) #19	RCN1 (ENSPCIG00000004288) #21	PAX6 (ENSPCIG00000012545) #22	ELP4 (ENSPCIG00000012543) #23	IMMP1L (ENSPCIG00000012542) #24	DNAJC24 (ENSPCIG00000012541) #25	ENSPCIG00000001554 #26	MPPED2 (ENSPCIG00000001518) #28	ARL14EP (ENSPCIG00000001506) #29	FSHB (ENSPCIG00000001494) #31	KCNA4 (ENSPCIG00000009690)
Wallaby	MODERN SPECIES	615																PAX6 (ENSMEUG00000015900) #22
Tasmanian devil	MODERN SPECIES	5	CAPRIN1 (ENSSHAG00000002731)	LMO2 (ENSSHAG00000018647)	FBXO3 (ENSSHAG00000018609)	ENSSHAG00000031082	KIAA1549L (ENSSHAG00000018497)	HIPK3 (ENSSHAG00000018303)	CSTF3 (ENSSHAG00000018128)	TCP11L1 (ENSSHAG00000018104)	DEPDC7 (ENSSHAG00000026677)	QSER1 (ENSSHAG00000018007)	PRRG4 (ENSSHAG00000028281)	CCDC73 (ENSSHAG00000030516) #14	EIF3M (ENSSHAG00000017641) #16	WT1 (ENSSHAG00000027965) #19	RCN1 (ENSSHAG00000017010) #21	PAX6 (ENSSHAG00000016310) #22	ELP4 (ENSSHAG00000015701) #23	IMMP1L (ENSSHAG00000025017) #24	DNAJC24 (ENSSHAG00000025176) #25	ENSSHAG00000013701 #26	MPPED2 (ENSSHAG00000011008) #28	ARL14EP (ENSSHAG00000025815) #29	FSHB (ENSSHAG00000009491) #31	KCNA4 (ENSSHAG00000031255)	ENSSHAG00000015956	KIF18A (ENSSHAG00000015625)	BDNF (ENSSHAG00000014528)	LIN7C (ENSSHAG00000013710)	LGR4 (ENSSHAG00000013104)	ENSSHAG00000012905	BBOX1 (ENSSHAG00000011451)
Opossum	MODERN SPECIES	4	ENSMODG00000009806	KIAA1549L (ENSMODG00000009801)	HIPK3 (ENSMODG00000009781)	ENSMODG00000009745	TCP11L1 (ENSMODG00000009728)	ENSMODG00000009718	QSER1 (ENSMODG00000009706)	PRRG4 (ENSMODG00000042926)	CCDC73 (ENSMODG00000009690) #14	EIF3M (ENSMODG00000009678) #16	ENSMODG00000028501	WT1 (ENSMODG00000009646) #19	RCN1 (ENSMODG00000009625) #21	ENSMODG00000028948	ENSMODG00000041494	PAX6 (ENSMODG00000009611) #22	ELP4 (ENSMODG00000009596) #23	IMMP1L (ENSMODG00000009580) #24	ENSMODG00000009567 #25	ENSMODG00000009560 #26	MPPED2 (ENSMODG00000009548) #28	ARL14EP (ENSMODG00000009529) #29	FSHB (ENSMODG00000009526) #31	ENSMODG00000049969	METTL15 (ENSMODG00000009478)	KIF18A (ENSMODG00000009475)	BDNF (ENSMODG00000009461)	LIN7C (ENSMODG00000009456)	LGR4 (ENSMODG00000009446)	ENSMODG00000029502	BBOX1 (ENSMODG00000009421)