Neopterygii ANCESTRAL SPECIES 68 ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342 ENSGT00940000161398 ENSGT00940000164578.a.a ENSGT00390000004360.a.b.b ENSGT00950000183115.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01040000240444.A.b.a.a ENSGT01040000240444.A.b.a.b ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00940000156108 ENSGT00730000114072 ENSGT01030000234571.b.b.a.a.a Osteoglossocephalai ANCESTRAL SPECIES 123 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT01030000234571.b.b.a.a.a ENSGT00940000156108 ENSGT00730000114072 ENSGT01040000240444.A.b.a.a ENSGT01040000240444.A.b.b ENSGT00950000183136.b.b ENSGT00950000183115.a ENSGT00390000004360.a.b.b ENSGT00940000164578.a.a ENSGT00940000161398.f ENSGT00940000156342.c ENSGT00940000161398.e ENSGT00940000156342.d ENSGT00940000157522 Clupeocephala ANCESTRAL SPECIES 144 ENSGT01030000234629.C ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000160117 ENSGT00390000015987 Euteleosteomorpha ANCESTRAL SPECIES 126 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000160117 ENSGT00390000015987 ENSGT00920000150321 ENSGT00920000149201 Acanthomorphata ANCESTRAL SPECIES 329 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000160117 ENSGT00390000015987 Euacanthomorphacea ANCESTRAL SPECIES 152 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00390000015987 Percomorphaceae ANCESTRAL SPECIES 56 ENSGT00990000203615.b.a.b #23 ENSGT00940000177991 ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155420.a.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155932.b.a ENSGT00940000166267.a ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ##23 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000177991 ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00990000203615.b.a.b.d ##23 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ENSGT00940000155932.b.a ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ##23 Atherinomorphae ANCESTRAL SPECIES 76 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155932.b.a ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 Cyprinodontiformes ANCESTRAL SPECIES 32 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00390000009030 ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00890000139406.a ENSGT00940000177991 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a.c Cyprinodontoidei ANCESTRAL SPECIES 114 ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 NAME_4 ANCESTRAL SPECIES 437 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 Sheepshead minnow MODERN SPECIES 1354 nlk2 (ENSCVAG00000010645) #19 ENSCVAG00000010613 #20 NLRX1 (ENSCVAG00000010547) #21 efhd1 (ENSCVAG00000000291) #22 kcnj13 (ENSCVAG00000010533) #23 Mummichog MODERN SPECIES 749 akap1b (ENSFHEG00000020302) ENSFHEG00000020212 efhd1 (ENSFHEG00000020205) #22 ENSFHEG00000020181 Poeciliinae ANCESTRAL SPECIES 39 ENSGT00940000156097.a ENSGT00390000009083.n ENSGT00390000017207.i.a ENSGT00940000155231.a.a ENSGT00940000166660 ENSGT00530000063801.b.g ENSGT00940000153695.A ENSGT00550000074797.a.a ENSGT00940000160802.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00940000154981.bb.a ENSGT00890000139406.a ENSGT00940000177991 ENSGT00940000155768.B.u ENSGT00390000011000 ENSGT00940000155713 ENSGT00940000155599.i.a.a.c ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000169979 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a Poecilia ANCESTRAL SPECIES 56 ENSGT00940000156097.a ENSGT00390000009083.n ENSGT00390000017207.i.a ENSGT00940000155231.a.a ENSGT00940000166660 ENSGT00530000063801.b.g ENSGT00940000153695.A ENSGT00550000074797.a.a ENSGT00940000160802.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00940000154981.bb.a ENSGT00890000139406.a ENSGT00940000177991 ENSGT00940000155768.B.u ENSGT00390000011000 ENSGT00940000155713 ENSGT00940000155599.i.a.a.c ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000169979 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a NAME_6 ANCESTRAL SPECIES 248 ENSGT00940000155231.a.a ENSGT00940000166660 ENSGT00530000063801.b.g ENSGT00940000153695.A ENSGT00550000074797.a.a ENSGT00940000160802.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00940000154981.bb.a.k ENSGT00940000154981.bb.a.l ENSGT00890000139406.a ENSGT00940000155768.B.u ENSGT00390000011000 ENSGT00940000155713 ENSGT00940000155599.i.a.a.c ENSGT00940000155599.j Sailfin molly MODERN SPECIES 1152 ENSPLAG00000017608 slc12a3 (ENSPLAG00000017593) ENSPLAG00000017535 #21 efhd1 (ENSPLAG00000017499) #22 kcnj13 (ENSPLAG00000017476) #23 ENSPLAG00000017391 ENSPLAG00000017381 Amazon molly MODERN SPECIES 578 PHLDB1 (ENSPFOG00000003890) ENSPFOG00000004163 ENSPFOG00000004847 zgc:113279 (ENSPFOG00000004876) NF1 (ENSPFOG00000004914) OMG (ENSPFOG00000005533) cuedc1b (ENSPFOG00000005542) akap1b (ENSPFOG00000005623) SMCO4 (ENSPFOG00000019988) nlk2 (ENSPFOG00000005722) #19 ENSPFOG00000005828 #20 NLRX1 (ENSPFOG00000005890) #21 efhd1 (ENSPFOG00000006018) #22 kcnj13 (ENSPFOG00000006054) #23 fat3a (ENSPFOG00000006119) wsb1 (ENSPFOG00000006911) MYO18A (ENSPFOG00000007000) pipox (ENSPFOG00000007055) PHF12 (ENSPFOG00000007125) dhrs13b.1 (ENSPFOG00000007291) dhrs13a.3 (ENSPFOG00000007346) Guppy MODERN SPECIES 443 ubash3bb (ENSPREG00000014141) hmbsa (ENSPREG00000014179) arcn1b (ENSPREG00000014276) PHLDB1 (ENSPREG00000014338) ENSPREG00000014371 ENSPREG00000014392 NF1 (ENSPREG00000014418) ENSPREG00000014503 cuedc1b (ENSPREG00000014516) akap1b (ENSPREG00000014531) SMCO4 (ENSPREG00000014535) SMCO4 (ENSPREG00000014541) nlk2 (ENSPREG00000014548) #19 ENSPREG00000014570 #20 NLRX1 (ENSPREG00000014591) #21 efhd1 (ENSPREG00000014617) #22 kcnj13 (ENSPREG00000014635) #23 ENSPREG00000014680 ENSPREG00000014747 wsb1 (ENSPREG00000014766) ENSPREG00000014790 MYO18A (ENSPREG00000014801) pipox (ENSPREG00000014844) PHF12 (ENSPREG00000014889) dhrs13b.1 (ENSPREG00000014926) dhrs13a.3 (ENSPREG00000015168) lhx1a (ENSPREG00000015189) bcas3 (ENSPREG00000015211) ENSPREG00000015257 tbx2b (ENSPREG00000015273) tbx4 (ENSPREG00000015296) Platyfish MODERN SPECIES 9 ubash3bb (ENSXMAG00000012415) hmbsa (ENSXMAG00000023756) arcn1b (ENSXMAG00000012365) PHLDB1 (ENSXMAG00000018015) ENSXMAG00000018025 ENSXMAG00000012355 zgc:113279 (ENSXMAG00000025147) NF1 (ENSXMAG00000012244) OMG (ENSXMAG00000029866) cuedc1b (ENSXMAG00000012229) akap1b (ENSXMAG00000012222) SMCO4 (ENSXMAG00000019695) nlk2 (ENSXMAG00000012171) #19 ENSXMAG00000012161 #20 NLRX1 (ENSXMAG00000008366) #21 efhd1 (ENSXMAG00000012154) #22 kcnj13 (ENSXMAG00000012145) #23 fat3a (ENSXMAG00000012113) wsb1 (ENSXMAG00000026740) MYO18A (ENSXMAG00000012050) pipox (ENSXMAG00000012037) PHF12 (ENSXMAG00000012001) dhrs13b.1 (ENSXMAG00000021645) dhrs13a.3 (ENSXMAG00000006450) ENSXMAG00000025770 lhx1a (ENSXMAG00000005342) bcas3 (ENSXMAG00000002371) tbx2b (ENSXMAG00000025936) tbx4 (ENSXMAG00000026662) brip1 (ENSXMAG00000005742) ENSXMAG00000025039 Aplocheiloidei ANCESTRAL SPECIES 324 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 Turquoise killifish MODERN SPECIES 39 EFHD1 (ENSNFUG00015019338) #22 KCNJ13 (ENSNFUG00015019341) #23 ENSNFUG00015019342 fat3a (ENSNFUG00015019357) ENSNFUG00015019505 ENSNFUG00015019508 #20 Mangrove rivulus MODERN SPECIES 313 nlk2 (ENSKMAG00000004766) #19 ENSKMAG00000004803 #20 ENSKMAG00000004822 NLRX1 (ENSKMAG00000004848) #21 efhd1 (ENSKMAG00000004896) #22 kcnj13 (ENSKMAG00000004919) #23 MRPS23 (ENSKMAG00000004939) znf277 (ENSKMAG00000004978) tpst1 (ENSKMAG00000005037) SGSM2 (ENSKMAG00000005085) Oryzias ANCESTRAL SPECIES 8 ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a #20 ENSGT00940000158363 #19 ENSGT00390000015987 ENSGT00550000074797.a.a.f ENSGT00940000160802.a ENSGT00740000117046 ENSGT00390000001360.q.b ENSGT00940000176216 ENSGT00390000006762.c ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000157853.a ENSGT00390000014712.a.g.a ENSGT00940000157083 ENSGT00540000072704 Oryzias_b ANCESTRAL SPECIES 68 ENSGT00390000006030.d.a.b ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a #20 ENSGT00940000158363 #19 ENSGT00390000015987 ENSGT00550000074797.a.a.f ENSGT00940000160802.a ENSGT00740000117046 ENSGT00390000001360.q.b ENSGT00390000006762.c ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a Javanese ricefish MODERN SPECIES 4 tpst1 (ENSOJAG00000002087) ENSOJAG00000002065 ENSOJAG00000002036 ENSOJAG00000002023 vezf1b (ENSOJAG00000001973) mrps23 (ENSOJAG00000001959) NGEF (ENSOJAG00000001844) ENSOJAG00000001812 #20 nlk2 (ENSOJAG00000001725) #19 SMCO4 (ENSOJAG00000020664) OMG (ENSOJAG00000020658) ENSOJAG00000020649 akap1b (ENSOJAG00000018582) cuedc1b (ENSOJAG00000018570) NLRX1 (ENSOJAG00000018553) #21 efhd1 (ENSOJAG00000018548) #22 SNX19 (ENSOJAG00000018537) ENSOJAG00000018515 ADAMTS8 (ENSOJAG00000018431) zbtb44 (ENSOJAG00000018405) ENSOJAG00000018397 ENSOJAG00000018390 ENSOJAG00000018348 ENSOJAG00000018290 ENSOJAG00000018272 ptprna (ENSOJAG00000018026) desma (ENSOJAG00000017951) TMEM198 (ENSOJAG00000017934) BIN1 (ENSOJAG00000017751) ihha (ENSOJAG00000017681) snx4 (ENSOJAG00000017268) Indian medaka MODERN SPECIES 28 efhd1 (ENSOMEG00000015416) #22 ENSOMEG00000015390 ENSOMEG00000015340 ENSOMEG00000015323 ENSOMEG00000015286 ENSOMEG00000015264 ca10a (ENSOMEG00000015201) ENSOMEG00000015159 nme2a (ENSOMEG00000000383) MBTD1 (ENSOMEG00000015112) tdrkh (ENSOMEG00000015063) bms1 (ENSOMEG00000015042) adoa (ENSOMEG00000014983) egr2b (ENSOMEG00000014974) NHLRC3 (ENSOMEG00000014962) nrbf2b (ENSOMEG00000014948) Oryzias_a ANCESTRAL SPECIES 51 ENSGT00390000006030.d.a.b ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a #20 ENSGT00940000158363 #19 ENSGT00390000015987 ENSGT00550000074797.a.a.f ENSGT00940000160802.a ENSGT00740000117046 ENSGT00390000001360.q.b ENSGT00940000176216 ENSGT00390000006762.c ENSGT00390000012058.c.a #22 ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b.a ENSGT01050000245833 ENSGT00940000167856.b.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000157853.a ENSGT00390000014712.a.g.a Chinese medaka MODERN SPECIES 3505 ENSOSIG00000002439 #22 Japanese Medaka HdrR MODERN SPECIES 4 ENSORLG00000023070 ENSORLG00000015060 mrps23 (ENSORLG00000023980) ENSORLG00000015069 ENSORLG00000015075 #20 nlk2 (ENSORLG00000015084) #19 SMCO4 (ENSORLG00000026161) ENSORLG00000023025 ENSORLG00000024394 OMG (ENSORLG00000022700) ENSORLG00000026470 ENSORLG00000015104 ENSORLG00000015123 ENSORLG00000029499 cuedc1b (ENSORLG00000015129) efhd1 (ENSORLG00000015162) #22 ENSORLG00000026273 SNX19 (ENSORLG00000015174) ENSORLG00000015202 ADAMTS8 (ENSORLG00000015206) zbtb44 (ENSORLG00000015218) ENSORLG00000029002 ENSORLG00000025830 ENSORLG00000030540 zgc:113279 (ENSORLG00000026552) ENSORLG00000028864 ENSORLG00000030188 PHLDB1 (ENSORLG00000015270) ENSORLG00000015290 ENSORLG00000024780 ENSORLG00000030521 Ovalentaria_B ANCESTRAL SPECIES 75 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00990000203615.b.a.b.d ##23 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ENSGT00940000155932.b.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000015987 ENSGT00940000160802.a ENSGT00740000117046 ENSGT00550000074797.a.a ENSGT00390000001360.q.b ENSGT00390000006762.c ENSGT00890000139406.a Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155932.b.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000015987 ENSGT00550000074797.a.a ENSGT00940000160802.a ENSGT00740000117046 ENSGT00390000001360.q.b ENSGT00390000006762.c ENSGT00890000139406.a ENSGT00940000156066.o Amphiprion ANCESTRAL SPECIES 270 ENSGT00950000182923.B.a ENSGT00940000166267.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155932.b.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 Orange clownfish MODERN SPECIES 23 APBB1 (ENSAPEG00000008448) ilk (ENSAPEG00000008428) ENSAPEG00000008416 NECTIN3 (ENSAPEG00000008401) diabloa (ENSAPEG00000008362) ENSAPEG00000008334 ENSAPEG00000008308 diabloa (ENSAPEG00000008280) or95a1 (ENSAPEG00000008273) ENSAPEG00000008260 fat3a (ENSAPEG00000008161) ENSAPEG00000008129 GAL3ST2 (ENSAPEG00000008086) ENSAPEG00000008071 ENSAPEG00000008031 efhd1 (ENSAPEG00000008019) #22 kcnj13 (ENSAPEG00000008008) ##23 NGEF (ENSAPEG00000007936) mrps23 (ENSAPEG00000007913) vezf1b (ENSAPEG00000007873) nlk2 (ENSAPEG00000007834) #19 ENSAPEG00000007783 #20 NLRX1 (ENSAPEG00000007597) #21 ENSAPEG00000007563 SMCO4 (ENSAPEG00000007556) ENSAPEG00000007519 ENSAPEG00000007500 NF1 (ENSAPEG00000007283) akap1b (ENSAPEG00000007202) ENSAPEG00000007178 cuedc1b (ENSAPEG00000007146) Clown anemonefish MODERN SPECIES 700 GAL3ST2 (ENSAOCG00000014785) ENSAOCG00000014636 ENSAOCG00000000906 efhd1 (ENSAOCG00000014075) #22 kcnj13 (ENSAOCG00000014060) ##23 ENSAOCG00000000894 NGEF (ENSAOCG00000014033) mrps23 (ENSAOCG00000000884) Spiny chromis MODERN SPECIES 2645 efhd1 (ENSAPOG00000001245) #22 Bicolor damselfish MODERN SPECIES 376 ENSSPAG00000015337 ENSSPAG00000015307 ENSSPAG00000015294 ENSSPAG00000015274 ENSSPAG00000015261 ENSSPAG00000015247 ENSSPAG00000015220 fat3a (ENSSPAG00000015165) efhd1 (ENSSPAG00000015147) #22 kcnj13 (ENSSPAG00000015137) ##23 NGEF (ENSSPAG00000015055) mrps23 (ENSSPAG00000015036) ENSSPAG00000015029 vezf1b (ENSSPAG00000014992) nlk2 (ENSSPAG00000014961) #19 ENSSPAG00000014920 #20 NLRX1 (ENSSPAG00000014867) #21 Cichlidae ANCESTRAL SPECIES 41 ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a Midas cichlid MODERN SPECIES 1228 efhd1 (ENSACIG00000021603) #22 kcnj13 (ENSACIG00000021532) ##23 gpd1l (ENSACIG00000021508) ENSACIG00000021499 ENSACIG00000021494 ENSACIG00000021485 ENSACIG00000021470 ggctb (ENSACIG00000021425) Pseudocrenilabrinae ANCESTRAL SPECIES 33 ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a Nile tilapia MODERN SPECIES 5 ENSONIG00000028346 ENSONIG00000041223 lhx1a (ENSONIG00000010444) ENSONIG00000029167 ENSONIG00000019511 ENSONIG00000034731 dhrs13a.3 (ENSONIG00000008322) dhrs13b.1 (ENSONIG00000008321) ENSONIG00000038200 ENSONIG00000038366 PHF12 (ENSONIG00000008320) SEZ6 (ENSONIG00000008319) ENSONIG00000031325 #20 ENSONIG00000029043 NLRX1 (ENSONIG00000015761) #21 efhd1 (ENSONIG00000006692) #22 kir7.1 (ENSONIG00000006690) ##23 GAL3ST2 (ENSONIG00000006688) ENSONIG00000028613 fat3a (ENSONIG00000006677) ENSONIG00000034934 vezf1b (ENSONIG00000006414) ENSONIG00000030928 ENSONIG00000006416 mrps23 (ENSONIG00000006417) NGEF (ENSONIG00000006422) ENSONIG00000039275 nlk2 (ENSONIG00000006428) #19 cuedc1b (ENSONIG00000014823) akap1b (ENSONIG00000014829) NF1 (ENSONIG00000014832) Pseudocrenilabrinae_A ANCESTRAL SPECIES 42 ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00940000181892 ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a Lyretail cichlid MODERN SPECIES 352 akap1b (ENSNBRG00000006439) ENSNBRG00000006428 ENSNBRG00000006415 ENSNBRG00000006396 NF1 (ENSNBRG00000006229) SMCO4 (ENSNBRG00000006212) vezf1b (ENSNBRG00000006195) ENSNBRG00000006162 mrps23 (ENSNBRG00000006143) NGEF (ENSNBRG00000006097) ENSNBRG00000006078 nlk2 (ENSNBRG00000006031) #19 ENSNBRG00000005958 #20 ENSNBRG00000005940 ENSNBRG00000005912 #21 efhd1 (ENSNBRG00000005896) #22 kir7.1 (ENSNBRG00000005862) ##23 GAL3ST2 (ENSNBRG00000005843) fat3a (ENSNBRG00000005759) Haplochromini DUPLICATION Haplochromini ANCESTRAL SPECIES ENSGT00390000012058.c.a.e #22 Burton s mouthbrooder MODERN SPECIES 1636 efhd1 (ENSHBUG00000015298) #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00390000012058.c.a.e #22 P. nyererei MODERN SPECIES 1417 ENSPNYG00000001550 #22 Haplochromini ANCESTRAL SPECIES 48 ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00940000176216 ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a.f #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.h Haplochromini_A ANCESTRAL SPECIES 54 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a.f #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.h Haplochromini_B ANCESTRAL SPECIES 58 ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT01100000263804.b ENSGT00390000015987 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT01100000263636.d.a.b ENSGT00940000166084.B.a.a.e ENSGT00940000159493 #21 ENSGT00390000012058.c.a.f #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.h Zebra mbuna MODERN SPECIES 1096 NF1 (ENSMZEG00005000651) ENSMZEG00005000862 ENSMZEG00005000883 ENSMZEG00005000897 ENSMZEG00005000927 SMCO4 (ENSMZEG00005000952) vezf1b (ENSMZEG00005000969) ENSMZEG00005001005 mrps23 (ENSMZEG00005001041) ENSMZEG00005001065 nlk2 (ENSMZEG00005001076) #19 ENSMZEG00005001127 #20 ENSMZEG00005001235 ENSMZEG00005001252 NLRX1 (ENSMZEG00005001269) #21 efhd1 (ENSMZEG00005001278) #22 kcnj13 (ENSMZEG00005001298) ##23 ENSMZEG00005001305 fat3a (ENSMZEG00005001339) PHF12 (ENSMZEG00005001381) bcas3 (ENSMZEG00005001458) tbx2b (ENSMZEG00005001599) tbx4 (ENSMZEG00005001653) brip1 (ENSMZEG00005001688) ppm1da (ENSMZEG00005001702) appbp2 (ENSMZEG00005001710) ENSMZEG00005001742 ENSMZEG00005001758 USP6 (ENSMZEG00005001799) ENSMZEG00005001910 tmem97 (ENSMZEG00005001929) Eastern happy MODERN SPECIES 5 NF1 (ENSACLG00000022486) ENSACLG00000022611 ENSACLG00000022625 ENSACLG00000022637 SMCO4 (ENSACLG00000022650) vezf1b (ENSACLG00000022666) ENSACLG00000022714 mrps23 (ENSACLG00000022720) NGEF (ENSACLG00000022730) nlk2 (ENSACLG00000022772) #19 ENSACLG00000022840 ENSACLG00000022863 #20 ENSACLG00000023089 NLRX1 (ENSACLG00000023103) #21 ENSACLG00000023134 efhd1 (ENSACLG00000023148) #22 ENSACLG00000023154 kcnj13 (ENSACLG00000023160) ##23 GAL3ST2 (ENSACLG00000023170) fat3a (ENSACLG00000023285) P. nyererei MODERN SPECIES 538 wsb1 (ENSPNYG00000020289) cuedc1b (ENSPNYG00000020277) akap1b (ENSPNYG00000020264) ENSPNYG00000020246 ENSPNYG00000020237 NF1 (ENSPNYG00000020113) ENSPNYG00000020097 SMCO4 (ENSPNYG00000020087) vezf1b (ENSPNYG00000020051) ENSPNYG00000020004 mrps23 (ENSPNYG00000019983) NGEF (ENSPNYG00000019953) nlk2 (ENSPNYG00000019894) #19 ENSPNYG00000019731 #20 NLRX1 (ENSPNYG00000019696) #21 efhd1 (ENSPNYG00000019662) #22 kcnj13 (ENSPNYG00000019649) ##23 ENSPNYG00000019634 GAL3ST2 (ENSPNYG00000019613) fat3a (ENSPNYG00000019553) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b Eupercaria ANCESTRAL SPECIES 7 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b Tetraodontidae ANCESTRAL SPECIES 220 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.a #23 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d Fugu MODERN SPECIES 2 SLC19A3 (ENSTRUG00000007628) pid1 (ENSTRUG00000030119) dner (ENSTRUG00000007431) trip12 (ENSTRUG00000006584) rnf7 (ENSTRUG00000006552) grk7b (ENSTRUG00000006176) fzd9b (ENSTRUG00000026125) baz1b (ENSTRUG00000005817) bcl7bb (ENSTRUG00000022681) hip1 (ENSTRUG00000005542) ENSTRUG00000026034 pak1 (ENSTRUG00000004976) ENSTRUG00000004581 ENSTRUG00000023776 NLRX1 (ENSTRUG00000002187) #21 efhd1 (ENSTRUG00000030460) #22 kcnj13 (ENSTRUG00000001814) #23 NGEF (ENSTRUG00000001518) TAAR1 (ENSTRUG00000025464) GAL3ST2 (ENSTRUG00000003461) ENSTRUG00000017952 ENSTRUG00000032356 ccnp (ENSTRUG00000026544) ccnp (ENSTRUG00000010982) akt2 (ENSTRUG00000010540) DHX40 (ENSTRUG00000010369) igsf11 (ENSTRUG00000010310) ENSTRUG00000021402 GIT1 (ENSTRUG00000009923) ankrd13b (ENSTRUG00000021746) slc6a4a (ENSTRUG00000008917) Tetraodon MODERN SPECIES 26 ENSTNIG00000006091 ENSTNIG00000006090 ENSTNIG00000002643 ENSTNIG00000000797 sall1a (ENSTNIG00000004257) ENSTNIG00000004256 ENSTNIG00000004815 rnf7 (ENSTNIG00000005982) grk7b (ENSTNIG00000019847) baz1b (ENSTNIG00000014185) bcl7bb (ENSTNIG00000000582) hip1 (ENSTNIG00000014184) ENSTNIG00000014183 pak1 (ENSTNIG00000003751) NLRX1 (ENSTNIG00000006412) #21 efhd1 (ENSTNIG00000006411) #22 kcnj13 (ENSTNIG00000006410) #23 ENSTNIG00000018619 zgc:109889 (ENSTNIG00000018620) htr2cl1 (ENSTNIG00000018621) ENSTNIG00000018622 ccnb3 (ENSTNIG00000018623) tnfsf10l3 (ENSTNIG00000005788) CLCN5 (ENSTNIG00000005787) ENSTNIG00000005786 bmp15 (ENSTNIG00000005785) ENSTNIG00000005784 ENSTNIG00000005783 hdac8 (ENSTNIG00000005782) cited1 (ENSTNIG00000005781) cited1 (ENSTNIG00000002872) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.c.b ##23 ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 187 SMCO4 (ENSLBEG00000013580) nlk2 (ENSLBEG00000013526) #19 ENSLBEG00000013487 #20 NLRX1 (ENSLBEG00000013386) #21 efhd1 (ENSLBEG00000013328) #22 kcnj13 (ENSLBEG00000013304) ##23 GAL3ST2 (ENSLBEG00000013282) ENSLBEG00000013249 ENSLBEG00000013230 ENSLBEG00000013203 ENSLBEG00000013182 ENSLBEG00000013165 slc37a4a (ENSLBEG00000013128) slc37a4a (ENSLBEG00000013109) trappc4 (ENSLBEG00000013080) rps25 (ENSLBEG00000013063) sgcg (ENSLBEG00000013026) SACS (ENSLBEG00000012985) ENSLBEG00000012942 MIPEP (ENSLBEG00000012788) Ballan wrasse MODERN SPECIES 2007 efhd1 (ENSLBEG00000014247) #22 kcnj13 (ENSLBEG00000014134) ##23 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000165699.A.a.b ENSGT00940000162258 ENSGT00940000156066.o ENSGT00890000139406.a ENSGT00390000006762.c ENSGT00390000001360.q.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 93 ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a Large yellow croaker MODERN SPECIES 94 ENSLCRG00005018574 efhd1 (ENSLCRG00005018572) #22 kcnj13 (ENSLCRG00005018570) ##23 GAL3ST2 (ENSLCRG00005018568) European seabass MODERN SPECIES 3 ENSDLAG00005002816 ENSDLAG00005002682 ENSDLAG00005034569 ENSDLAG00005000874 ENSDLAG00005000861 ENSDLAG00005019260 msi2b (ENSDLAG00005032073) ENSDLAG00005000851 ENSDLAG00005033375 ENSDLAG00005000844 ENSDLAG00005026594 ENSDLAG00005029218 ENSDLAG00005000694 ENSDLAG00005000658 #19 ENSDLAG00005032160 #20 efhd1 (ENSDLAG00005034056) #22 ENSDLAG00005030015 #21 ENSDLAG00005016331 ENSDLAG00005021876 ENSDLAG00005027470 ENSDLAG00005017259 ENSDLAG00005029782 fat3a (ENSDLAG00005017637) ENSDLAG00005033229 ENSDLAG00005034093 ENSDLAG00005032354 ENSDLAG00005033245 ENSDLAG00005017202 ENSDLAG00005031765 ENSDLAG00005031907 ENSDLAG00005002624 Gilthead seabream MODERN SPECIES 11 pipox (ENSSAUG00010018297) MYO18A (ENSSAUG00010012156) ENSSAUG00010012080 lgals9l5 (ENSSAUG00010012079) KSR1 (ENSSAUG00010012076) ENSSAUG00010012074 wsb1 (ENSSAUG00010012049) cuedc1b (ENSSAUG00010012037) akap1b (ENSSAUG00010011987) ENSSAUG00010011983 ENSSAUG00010011982 NF1 (ENSSAUG00010011957) SMCO4 (ENSSAUG00010011933) nlk2 (ENSSAUG00010011645) #19 NLRX1 (ENSSAUG00010011446) #21 efhd1 (ENSSAUG00010011443) #22 kcnj13 (ENSSAUG00010011441) ##23 dhrs13a.3 (ENSSAUG00010011437) ENSSAUG00010011436 ENSSAUG00010011435 ENSSAUG00010011433 lhx1a (ENSSAUG00010011432) bcas3 (ENSSAUG00010011304) tbx2b (ENSSAUG00010011285) tbx4 (ENSSAUG00010011280) brip1 (ENSSAUG00010011273) ppm1da (ENSSAUG00010011270) appbp2 (ENSSAUG00010011269) ENSSAUG00010011268 USP32 (ENSSAUG00010011234) ENSSAUG00010011225 Perciformes ANCESTRAL SPECIES 10 ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000161258.b ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000162258 Perciformes_a ANCESTRAL SPECIES 54 ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00940000161258.b ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000162258 Pike perch MODERN SPECIES 14 ENSSLUG00000001332 ENSSLUG00000001327 ENSSLUG00000001325 ENSSLUG00000001323 ENSSLUG00000001311 ENSSLUG00000001304 ENSSLUG00000001302 ENSSLUG00000001300 ENSSLUG00000001297 ENSSLUG00000001295 RPS6KB2 (ENSSLUG00000001259) efhd1 (ENSSLUG00000001244) #22 kcnj13 (ENSSLUG00000001243) ##23 ENSSLUG00000001238 ENSSLUG00000001232 GAL3ST2 (ENSSLUG00000001225) ENSSLUG00000001220 ENSSLUG00000001217 ENSSLUG00000001215 fat3a (ENSSLUG00000001164) ENSSLUG00000001115 ENSSLUG00000001110 ttc36 (ENSSLUG00000001107) FBXO40 (ENSSLUG00000001101) cntn5 (ENSSLUG00000001094) ARHGAP42 (ENSSLUG00000001065) pgr (ENSSLUG00000001042) Channel bull blenny MODERN SPECIES 4 ENSCGOG00000009498 CLIP3 (ENSCGOG00000009519) ENSCGOG00000009878 crk (ENSCGOG00000009881) ENSCGOG00000009891 ENSCGOG00000009959 ENSCGOG00000009963 zgc:101731 (ENSCGOG00000009967) ENSCGOG00000009968 NF1 (ENSCGOG00000010000) ENSCGOG00000011878 SMCO4 (ENSCGOG00000011879) nlk2 (ENSCGOG00000011884) #19 ENSCGOG00000012190 #20 NLRX1 (ENSCGOG00000012199) #21 efhd1 (ENSCGOG00000012220) #22 kcnj13 (ENSCGOG00000012221) ##23 GAL3ST2 (ENSCGOG00000012231) ENSCGOG00000012233 ENSCGOG00000012234 ENSCGOG00000012237 fat3a (ENSCGOG00000012246) ENSCGOG00000012504 ENSCGOG00000012507 ENSCGOG00000012509 vezf1b (ENSCGOG00000012527) ENSCGOG00000012534 msi2b (ENSCGOG00000012536) mrps23 (ENSCGOG00000012554) ENSCGOG00000012566 TAAR5 (ENSCGOG00000013059) Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000167036 ENSGT00940000158234 ENSGT00940000153881.b ENSGT01060000248589.A.c ENSGT00940000165970 ENSGT00520000058824 ENSGT00940000163530 ENSGT00440000037640 ENSGT00640000091563.b ENSGT00940000154550.b ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00940000159493 #21 ENSGT00950000182849.A.f.a.a #20 ENSGT00390000012058.c.a #22 ENSGT00940000161289 ENSGT00530000063405.b.e ENSGT00940000162996 ENSGT00940000157083 ENSGT00540000072704 ENSGT00940000156097.a ENSGT00390000009083.n ENSGT00390000017207.i.a ENSGT00940000155231.a.a ENSGT00940000166660 ENSGT00530000063801.b.g ENSGT00940000153695.A ENSGT00940000168466 ENSGT00940000167856.b ENSGT00940000153306.A.b Lumpfish MODERN SPECIES 4 ENSCLMG00005005391 ENSCLMG00005005389 triap1 (ENSCLMG00005005388) ENSCLMG00005005387 ENSCLMG00005005385 supt5h (ENSCLMG00005005159) rnaset2l (ENSCLMG00005005147) cox7a1 (ENSCLMG00005005146) ENSCLMG00005005145 ENSCLMG00005005144 NF1 (ENSCLMG00005003576) SMCO4 (ENSCLMG00005003547) nlk2 (ENSCLMG00005003545) #19 NLRX1 (ENSCLMG00005003531) #21 ENSCLMG00005003520 #20 efhd1 (ENSCLMG00005003517) #22 usp2a (ENSCLMG00005003447) TBCEL (ENSCLMG00005003439) ENSCLMG00005003196 ENSCLMG00005002662 ENSCLMG00005002651 usf1l (ENSCLMG00005002642) ENSCLMG00005002638 gkup (ENSCLMG00005002616) hmbsa (ENSCLMG00005002221) arcn1b (ENSCLMG00005001796) ENSCLMG00005001777 PHLDB1 (ENSCLMG00005001597) ENSCLMG00005001562 ENSCLMG00005001498 ENSCLMG00005001442 Stickleback MODERN SPECIES ilkap (ENSGACG00000004890) ENSGACG00000004898 SHKBP1 (ENSGACG00000004907) ENSGACG00000004916 ENSGACG00000004919 ENSGACG00000004922 ENSGACG00000004927 triap1 (ENSGACG00000004929) supt5h (ENSGACG00000004934) cox7a1 (ENSGACG00000004963) NF1 (ENSGACG00000004964) SMCO4 (ENSGACG00000004992) nlk2 (ENSGACG00000004996) #19 NLRX1 (ENSGACG00000005004) #21 ENSGACG00000005026 #20 efhd1 (ENSGACG00000005038) #22 ENSGACG00000005047 tbcela (ENSGACG00000005051) ENSGACG00000005067 ENSGACG00000005083 usf1l (ENSGACG00000005115) ENSGACG00000005145 gkup (ENSGACG00000005148) ubash3bb (ENSGACG00000005161) hmbsa (ENSGACG00000005173) arcn1b (ENSGACG00000005183) PHLDB1 (ENSGACG00000005214) ENSGACG00000005228 ENSGACG00000005256 ENSGACG00000005257 bco2b (ENSGACG00000005259) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000155479 ENSGT00390000010003 ENSGT00390000001053 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00390000014712.a.g ENSGT00940000157853.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00390000001053 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00940000157853.a ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000159642.f.a ENSGT00950000182856.b.c ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00940000171313 ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00390000006762.c ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d Climbing perch MODERN SPECIES 4 ENSATEG00000001214 ENSATEG00000001361 sdhdb (ENSATEG00000001375) ENSATEG00000001411 ENSATEG00000029487 ENSATEG00000001438 ENSATEG00000001703 ENSATEG00000001712 ENSATEG00000001747 ENSATEG00000002010 ENSATEG00000002033 ENSATEG00000002043 ENSATEG00000002049 #19 ENSATEG00000002086 #20 ENSATEG00000002129 #21 efhd1 (ENSATEG00000002133) #22 kcnj13 (ENSATEG00000002152) ##23 ENSATEG00000029147 ENSATEG00000002278 fat3a (ENSATEG00000002290) ENSATEG00000002436 ENSATEG00000003105 ENSATEG00000003283 ENSATEG00000003301 ENSATEG00000003349 ENSATEG00000003402 ENSATEG00000003411 ENSATEG00000003470 ENSATEG00000003532 ENSATEG00000003546 tnfaip1 (ENSATEG00000003571) Siamese fighting fish MODERN SPECIES 4 NF1 (ENSBSLG00000025757) ENSBSLG00000025834 OMG (ENSBSLG00000025835) SMCO4 (ENSBSLG00000025836) nlk2 (ENSBSLG00000025837) #19 ENSBSLG00000025963 #20 NLRX1 (ENSBSLG00000026001) #21 ENSBSLG00000026035 efhd1 (ENSBSLG00000026038) #22 kcnj13 (ENSBSLG00000026040) ##23 GAL3ST2 (ENSBSLG00000026043) ENSBSLG00000026055 fat3a (ENSBSLG00000026073) ENSBSLG00000002251 vezf1b (ENSBSLG00000002298) ENSBSLG00000002370 MYO18A (ENSBSLG00000002917) ENSBSLG00000003336 pipox (ENSBSLG00000003631) wsb1 (ENSBSLG00000003720) akap1b (ENSBSLG00000003812) ENSBSLG00000003942 mrps23 (ENSBSLG00000004208) cuedc1b (ENSBSLG00000004228) Zig-zag eel MODERN SPECIES 4 sdhdb (ENSMAMG00000028364) ENSMAMG00000000523 bco2b (ENSMAMG00000000539) ENSMAMG00000000579 ENSMAMG00000000587 ENSMAMG00000000602 ENSMAMG00000000770 ENSMAMG00000000864 ENSMAMG00000000914 ENSMAMG00000000972 ENSMAMG00000001125 ENSMAMG00000001151 ENSMAMG00000001164 #19 ENSMAMG00000001225 #20 ENSMAMG00000001248 #21 efhd1 (ENSMAMG00000027116) #22 kcnj13 (ENSMAMG00000001298) ##23 ENSMAMG00000001319 fat3a (ENSMAMG00000001350) ENSMAMG00000001470 ENSMAMG00000002432 ENSMAMG00000002465 ENSMAMG00000002488 ENSMAMG00000028356 ENSMAMG00000002597 ENSMAMG00000026343 ENSMAMG00000028010 ENSMAMG00000027256 ENSMAMG00000024752 tnfaip1 (ENSMAMG00000002763) ENSMAMG00000002797 Carangaria ANCESTRAL SPECIES 8 ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 Pleuronectoidei ANCESTRAL SPECIES 86 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 ENSGT00390000006030.d.a.b ENSGT00940000157944 Tongue sole MODERN SPECIES 14 tmem97 (ENSCSEG00000002797) ULK2 (ENSCSEG00000002799) aldh3a2a (ENSCSEG00000002822) ENSCSEG00000002950 tpst1 (ENSCSEG00000003027) SGSM2 (ENSCSEG00000003036) tnfaip1 (ENSCSEG00000003047) ift20 (ENSCSEG00000003051) lyrm9 (ENSCSEG00000003053) NF1 (ENSCSEG00000003058) ENSCSEG00000003078 SMCO4 (ENSCSEG00000003084) nlk2 (ENSCSEG00000003090) #19 ENSCSEG00000003104 #20 NLRX1 (ENSCSEG00000003116) #21 efhd1 (ENSCSEG00000003125) #22 kcnj13 (ENSCSEG00000003129) ##23 GAL3ST2 (ENSCSEG00000003134) fat3a (ENSCSEG00000003138) ENSCSEG00000003159 ENSCSEG00000003257 vezf1b (ENSCSEG00000003262) ENSCSEG00000003265 msi2b (ENSCSEG00000003266) mrps23 (ENSCSEG00000003275) NGEF (ENSCSEG00000003281) SIDT2 (ENSCSEG00000003295) SIK3 (ENSCSEG00000003318) ENSCSEG00000003331 ENSCSEG00000003337 ENSCSEG00000003340 Carangaria_A ANCESTRAL SPECIES 47 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00740000117046 ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.a ENSGT00940000155420.a.a ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182934.a.b.h.b.d.d ENSGT00940000161258.b ENSGT00390000002625 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 Barramundi perch MODERN SPECIES 27 NF1 (ENSLCAG00010002279) ENSLCAG00010002904 ENSLCAG00010002905 SMCO4 (ENSLCAG00010002906) nlk2 (ENSLCAG00010002914) #19 ENSLCAG00010002970 #20 NLRX1 (ENSLCAG00010002980) #21 efhd1 (ENSLCAG00010002989) #22 timm8b (ENSLCAG00010003017) sdhdb (ENSLCAG00010003020) ENSLCAG00010003021 BCO2 (ENSLCAG00010003039) ENSLCAG00010003128 SORL1 (ENSLCAG00010003241) ENSLCAG00010003645 abcg4b (ENSLCAG00010003652) akap1b (ENSLCAG00010003666) cuedc1b (ENSLCAG00010003681) wsb1 (ENSLCAG00010003686) KSR1 (ENSLCAG00010003691) ENSLCAG00010003693 MYO18A (ENSLCAG00010003783) ENSLCAG00010004144 Seriola ANCESTRAL SPECIES 168 ENSGT00740000117046 ENSGT00940000160802.a ENSGT00550000074797.a.a ENSGT00390000015987 ENSGT00940000158363 #19 ENSGT00950000182849.A.f.a.a #20 ENSGT00940000159493 #21 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b.d ##23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a Greater amberjack MODERN SPECIES 146 ENSSDUG00000007777 ENSSDUG00000007815 ENSSDUG00000007830 ENSSDUG00000007846 SMCO4 (ENSSDUG00000007883) nlk2 (ENSSDUG00000007892) #19 ENSSDUG00000007912 #20 NLRX1 (ENSSDUG00000007929) #21 efhd1 (ENSSDUG00000007961) #22 kcnj13 (ENSSDUG00000007976) ##23 GAL3ST2 (ENSSDUG00000008033) ENSSDUG00000008039 fat3a (ENSSDUG00000008047) ENSSDUG00000008096 Yellowtail amberjack MODERN SPECIES 2956 ENSSLDG00000018253 ENSSLDG00000018274 ENSSLDG00000018293 ENSSLDG00000018309 SMCO4 (ENSSLDG00000018334) nlk2 (ENSSLDG00000018341) #19 ENSSLDG00000018359 #20 NLRX1 (ENSSLDG00000018387) #21 efhd1 (ENSSLDG00000018422) #22 kcnj13 (ENSSLDG00000018434) ##23 GAL3ST2 (ENSSLDG00000018446) fat3a (ENSSLDG00000018459) ENSSLDG00000018501 ENSSLDG00000018529 CORIN (ENSSLDG00000018640) ENSSLDG00000018776 znhit1 (ENSSLDG00000018803) ENSSLDG00000018827 ENSSLDG00000018840 ENSSLDG00000018851 ENSSLDG00000018862 ENSSLDG00000018874 ift46 (ENSSLDG00000018884) Tiger tail seahorse MODERN SPECIES 517 ENSHCOG00000012892 lgals9l5 (ENSHCOG00000012839) KSR1 (ENSHCOG00000012833) wsb1 (ENSHCOG00000012780) akap1b (ENSHCOG00000012771) ENSHCOG00000012748 cuedc1b (ENSHCOG00000012738) ENSHCOG00000012714 ENSHCOG00000012703 NF1 (ENSHCOG00000012680) ENSHCOG00000012572 SMCO4 (ENSHCOG00000012563) nlk2 (ENSHCOG00000012555) #19 ENSHCOG00000000360 #20 NLRX1 (ENSHCOG00000012522) #21 efhd1 (ENSHCOG00000012496) #22 kcnj13 (ENSHCOG00000012481) #23 abcg4b (ENSHCOG00000012401) NGEF (ENSHCOG00000012372) mrps23 (ENSHCOG00000012335) ENSHCOG00000012322 Pinecone sodierfish MODERN SPECIES 4 ENSMMDG00005023043 ENSMMDG00005023050 ENSMMDG00005023081 ENSMMDG00005023089 dlc (ENSMMDG00005023100) timm50 (ENSMMDG00005023127) ENSMMDG00005023130 ENSMMDG00005023131 CLIP3 (ENSMMDG00005023133) ENSMMDG00005023135 ENSMMDG00005023137 ENSMMDG00005023142 nlk2 (ENSMMDG00005023154) #19 ENSMMDG00005023218 #20 NLRX1 (ENSMMDG00005023226) #21 efhd1 (ENSMMDG00005023303) #22 kcnj13 (ENSMMDG00005023305) #23 GAL3ST2 (ENSMMDG00005023307) fat3a (ENSMMDG00005023333) ENSMMDG00005023529 SMCO4 (ENSMMDG00005023530) rint1 (ENSMMDG00005023532) NGEF (ENSMMDG00005023546) mrps23 (ENSMMDG00005023548) msi2b (ENSMMDG00005023564) akap1b (ENSMMDG00005023736) NF1 (ENSMMDG00005023859) ENSMMDG00005024507 OMG (ENSMMDG00005024509) ENSMMDG00005024510 vezf1b (ENSMMDG00005024513) Cod MODERN SPECIES 7 ENSGMOG00000008804 ENSGMOG00000001882 pxylp1 (ENSGMOG00000025794) ENSGMOG00000023021 ENSGMOG00000024699 ENSGMOG00000014227 ENSGMOG00000030909 aldh3a2a (ENSGMOG00000009087) ENSGMOG00000009038 tnfaip1 (ENSGMOG00000009025) tpst1 (ENSGMOG00000009059) ENSGMOG00000009019 ENSGMOG00000009010 kcnj13 (ENSGMOG00000030777) #23 ENSGMOG00000029247 ENSGMOG00000008966 #22 ENSGMOG00000034276 ENSGMOG00000023248 fat3a (ENSGMOG00000012103) ENSGMOG00000033102 ENSGMOG00000012110 SMCO4 (ENSGMOG00000020586) ENSGMOG00000036920 ENSGMOG00000035327 ENSGMOG00000030509 ENSGMOG00000036874 ENSGMOG00000032921 ENSGMOG00000025811 ENSGMOG00000032096 ENSGMOG00000028834 ENSGMOG00000036501 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00530000064220 ENSGT00950000183086.a.a.b.h.a ENSGT00940000160165.a ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000162075 ENSGT00940000157522 ENSGT00940000156342.d ENSGT00940000161398.e ENSGT00940000164578.a.a ENSGT00390000004360.a.a ENSGT00950000183115.a.a.a ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000160117 ENSGT00940000162662.lc ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00920000150321 ENSGT00920000149201 ENSGT00940000157189.d ENSGT00940000155956.c ENSGT00390000000002.a.b ENSGT00940000154477.jc.a ENSGT00940000156324.f.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 621 ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c #22 ENSGT00990000203615.b.a.b.e #23 ENSGT00950000182923.B.a.e ENSGT00940000154981.bb.a.b.a.b Huchen MODERN SPECIES 1591 ENSHHUG00000033031 ENSHHUG00000033162 her8.2 (ENSHHUG00000033171) ENSHHUG00000033176 ITM2C (ENSHHUG00000033197) gpr55a (ENSHHUG00000033224) ENSHHUG00000033225 efhd1 (ENSHHUG00000033268) #22 kcnj13 (ENSHHUG00000033275) #23 GAL3ST2 (ENSHHUG00000033312) Salmoninae_a ANCESTRAL SPECIES 56 ENSGT01030000234629.C.b.b ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c #22 ENSGT00990000203615.b.a.b.e #23 ENSGT00950000182923.B.a.e ENSGT00940000154981.bb.a.b.b ENSGT00940000166267.a.j ENSGT00940000160117.i.b ENSGT00920000150321 ENSGT00940000157189.d.d ENSGT00940000155956.c.a ENSGT00390000000002.a.b.j.b ENSGT00990000203615.b.b.b.d.b ##23 ENSGT00940000154477.jc.a.c.b ENSGT00940000156324.f.a.c ENSGT00390000000214.a.a.e.d ENSGT00940000155158.q.a.a ENSGT00510000047299.d Salmo ANCESTRAL SPECIES 18 ENSGT00940000154369.g.b.b ENSGT01030000234629.C.b.b ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ENSGT00940000160165.a.d ENSGT00390000006095.c ENSGT00940000162075.db.b.b ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT00950000183136.b.b.i.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c #22 ENSGT00990000203615.b.a.b.e #23 ENSGT00950000182923.B.a.e ENSGT00940000154981.bb.a.b.b ENSGT00940000166267.a.j ENSGT00940000160117.i.b ENSGT00940000153511.a.ob.b.b ENSGT00940000162662.lc.b.a ENSGT01100000263475.f.b ENSGT00940000173852 ENSGT00920000150321 ENSGT00940000157189.d.d ENSGT00940000155956.c.a ENSGT00390000000002.a.b.j.b ENSGT00990000203615.b.b.b.d.b ##23 ENSGT00940000154477.jc.a.c.b Atlantic salmon MODERN SPECIES 28 pxylp1 (ENSSSAG00000057141) ENSSSAG00000101149 SPSB4 (ENSSSAG00000057105) ENSSSAG00000057097 CLSTN2 (ENSSSAG00000057150) ENSSSAG00000046286 mrps22 (ENSSSAG00000046262) ENSSSAG00000082803 ENSSSAG00000061272 HES6 (ENSSSAG00000061216) ENSSSAG00000088398 ENSSSAG00000061151 ITM2C (ENSSSAG00000061118) gpr55a (ENSSSAG00000120052) ENSSSAG00000060567 efhd1 (ENSSSAG00000060520) #22 kcnj13 (ENSSSAG00000060505) #23 ENSSSAG00000104038 fat3a (ENSSSAG00000085635) ENSSSAG00000108427 ENSSSAG00000113525 ENSSSAG00000059603 ENSSSAG00000059616 ENSSSAG00000059548 ENSSSAG00000090854 ENSSSAG00000087844 ENSSSAG00000059404 ENSSSAG00000059178 ENSSSAG00000114779 ENSSSAG00000035938 ENSSSAG00000121439 River trout MODERN SPECIES 4 SLC25A36 (ENSSTUG00000006696) spsb4a (ENSSTUG00000006771) ENSSTUG00000006772 CLSTN2 (ENSSTUG00000006813) rbp2a (ENSSTUG00000007216) mrps22 (ENSSTUG00000007231) ENSSTUG00000007276 ENSSTUG00000008129 HES6 (ENSSTUG00000008183) her8.2 (ENSSTUG00000008190) ENSSTUG00000008198 ITM2C (ENSSTUG00000008227) lpar5b (ENSSTUG00000008234) gpr55a (ENSSTUG00000008236) ENSSTUG00000008240 efhd1 (ENSSTUG00000008303) #22 kcnj13 (ENSSTUG00000008309) #23 ENSSTUG00000008316 GAL3ST2 (ENSSTUG00000008321) ENSSTUG00000008326 fat3a (ENSSTUG00000008343) ENSSTUG00000008544 ENSSTUG00000008551 ENSSTUG00000008572 hnrnpr (ENSSTUG00000008579) ENSSTUG00000008602 ENSSTUG00000008666 ENSSTUG00000008867 ENSSTUG00000008932 ENSSTUG00000008969 si:ch211-132b12.7 (ENSSTUG00000008991) Oncorhynchus ANCESTRAL SPECIES 57 ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ENSGT01030000234629.C.b.b ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c #22 ENSGT00990000203615.b.a.b.e #23 ENSGT00950000182923.B.a.e ENSGT00940000154981.bb.a.b.a.b ENSGT00940000154981.bb.a.b.a.a.c ENSGT00940000166267.a.j ENSGT00940000160117.j ENSGT00940000153511.a.ob.b.b ENSGT00390000015987.k ENSGT00940000162662.lc.b ENSGT01100000263475.f.b ENSGT00920000150321 ENSGT00940000157189.d.d ENSGT00940000155956.c.a ENSGT00390000000002.a.b.j.b ENSGT00990000203615.b.b.b.d.b ##23 Oncorhynchus_a ANCESTRAL SPECIES 78 ENSGT00390000016324.m.b ENSGT00940000154369.g.b.b ENSGT01030000234629.C.b.b ENSGT00530000064220.b ENSGT00950000183086.a.a.b.h.a.b.b ENSGT00940000160165.a.d ENSGT00900000141083.c.b.d ENSGT00390000006095.c ENSGT00940000157522.c ENSGT00940000161398.e.b ENSGT00940000164578.a.a.b ENSGT00390000004360.a.a.a ENSGT00950000183115.a.a.a.a ENSGT01040000240444.A.b.b.e.a ENSGT01030000234571.b.b.a.a.a.a ENSGT00390000012058.c.a.c #22 ENSGT00990000203615.b.a.b.e #23 ENSGT00950000182923.B.a.e ENSGT00940000154981.bb.a.b.a.b ENSGT00940000154981.bb.a.b.a.a.c ENSGT00940000166267.a.j ENSGT00940000160117.j Chinook salmon MODERN SPECIES 5 APBB1 (ENSOTSG00005005375) ilk (ENSOTSG00005005374) ENSOTSG00005005361 si:ch211-132b12.7 (ENSOTSG00005005356) ENSOTSG00005005352 ENSOTSG00005005350 COPB2 (ENSOTSG00005005339) mrps22 (ENSOTSG00005005336) PIK3CB (ENSOTSG00005005287) ENSOTSG00005005274 her8.2 (ENSOTSG00005005273) ENSOTSG00005005271 ITM2C (ENSOTSG00005005269) gpr55a (ENSOTSG00005005266) ENSOTSG00005004687 efhd1 (ENSOTSG00005004680) #22 kcnj13 (ENSOTSG00005004678) #23 GAL3ST2 (ENSOTSG00005004675) hnrnpr (ENSOTSG00005004663) SMCO4 (ENSOTSG00005004661) ENSOTSG00005004660 SLC25A36 (ENSOTSG00005004658) spsb4a (ENSOTSG00005004657) ENSOTSG00005004656 ENSOTSG00005004655 EPHA4 (ENSOTSG00005004652) pax3b (ENSOTSG00005004639) ENSOTSG00005004637 ENSOTSG00005004636 ENSOTSG00005004635 SGPP2 (ENSOTSG00005004634) Coho salmon MODERN SPECIES 9 pxylp1 (ENSOKIG00005021145) SLC25A36 (ENSOKIG00005021117) SPSB4 (ENSOKIG00005021110) ENSOKIG00005021104 CLSTN2 (ENSOKIG00005020906) rbp2a (ENSOKIG00005020847) COPB2 (ENSOKIG00005020802) mrps22 (ENSOKIG00005020794) PIK3CB (ENSOKIG00005019301) HES6 (ENSOKIG00005019217) ENSOKIG00005019210 ENSOKIG00005019198 ITM2C (ENSOKIG00005019191) gpr55a (ENSOKIG00005019189) ENSOKIG00005019083 efhd1 (ENSOKIG00005019062) #22 kcnj13 (ENSOKIG00005019057) #23 GAL3ST2 (ENSOKIG00005019048) ENSOKIG00005019003 ENSOKIG00005018984 ENSOKIG00005018974 ENSOKIG00005018948 ENSOKIG00005018937 SLC36A4 (ENSOKIG00005018904) ENSOKIG00005018870 SMCO4 (ENSOKIG00005018863) ENSOKIG00005018850 ENSOKIG00005018712 Onki-UAA (ENSOKIG00005018682) si:ch211-132b12.7 (ENSOKIG00005018673) ENSOKIG00005018626 Rainbow trout MODERN SPECIES 16 ENSOMYG00000068412 ENSOMYG00000055905 ENSOMYG00000043266 ENSOMYG00000043294 ENSOMYG00000043246 ENSOMYG00000043305 rbp2a (ENSOMYG00000043708) COPB2 (ENSOMYG00000062074) MRPS22 (ENSOMYG00000043703) PIK3CB (ENSOMYG00000043608) ENSOMYG00000043546 ENSOMYG00000043536 ENSOMYG00000043529 gpr55a (ENSOMYG00000043522) ENSOMYG00000043509 efhd1 (ENSOMYG00000043478) #22 kcnj13 (ENSOMYG00000043477) #23 ENSOMYG00000064329 ENSOMYG00000071106 fat3a (ENSOMYG00000043398) ENSOMYG00000068986 ENSOMYG00000043334 ENSOMYG00000043323 ENSOMYG00000043315 SMCO4 (ENSOMYG00000043307) ENSOMYG00000050781 ENSOMYG00000048781 ENSOMYG00000043747 ENSOMYG00000050145 ENSOMYG00000043769 ENSOMYG00000043792 Salmoninae ANCESTRAL SPECIES 1165 ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d #22 ENSGT00990000203615.b.a.b.f #23 ENSGT00950000182923.B.a.f Salmoninae_a ANCESTRAL SPECIES 3 ENSGT01030000234629.C.b.a ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d #22 ENSGT00990000203615.b.a.b.f #23 ENSGT00950000182923.B.a.f ENSGT00940000154981.bb.a.a ENSGT00940000166267.a.i ENSGT00940000160117.i.a ENSGT00940000153511.a.ob.b.a ENSGT00390000015987.l ENSGT00940000162662.lc.a.a ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00920000149201 ENSGT00940000157189.d.c ENSGT00940000155956.c.b ENSGT00390000000002.a.b.j.a ENSGT00990000203615.b.b.b.d.a ##23 Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ENSGT01030000234629.C.b.a ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d #22 ENSGT00990000203615.b.a.b.f #23 ENSGT00950000182923.B.a.f ENSGT00940000154981.bb.a.a ENSGT00940000166267.a.i ENSGT00940000160117.i.a ENSGT01100000263529.a.a.a.a.a.b.b ENSGT00940000153511.a.ob.b.a ENSGT00390000015987.l ENSGT00940000162662.lc.a.a ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00920000149201 ENSGT00940000157189.d.c ENSGT00940000155956.c.b ENSGT00390000000002.a.b.j.a Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00390000016324.m.a ENSGT00940000154369.g.b.a ENSGT01030000234629.C.b.a ENSGT00530000064220.a ENSGT00950000183086.a.a.b.h.a.a ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00940000157522.d.a.a ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d #22 ENSGT00990000203615.b.a.b.f #23 ENSGT00950000182923.B.a.f ENSGT00940000154981.bb.a.a ENSGT00940000166267.a.i ENSGT00940000160117.i.a ENSGT01100000263529.a.a.a.a.a.b.b ENSGT00940000153511.a.ob.b.a ENSGT00390000015987.l ENSGT00940000162662.lc.a.a ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00920000149201 ENSGT00940000157189.d.c ENSGT00940000155956.c.b ENSGT00390000000002.a.b.j.a Chinook salmon MODERN SPECIES 4 PPM1L (ENSOTSG00005036084) ENSOTSG00005036083 kpna4 (ENSOTSG00005036081) ENSOTSG00005036079 ENSOTSG00005036078 smc4 (ENSOTSG00005033673) ENSOTSG00005033659 ENSOTSG00005033658 HES6 (ENSOTSG00005033657) her8.2 (ENSOTSG00005033653) ENSOTSG00005033646 ITM2C (ENSOTSG00005033643) lpar5b (ENSOTSG00005033642) gpr55a (ENSOTSG00005033641) NGEF (ENSOTSG00005033262) efhd1 (ENSOTSG00005033260) #22 kcnj13 (ENSOTSG00005033259) #23 GAL3ST2 (ENSOTSG00005033258) dok1b (ENSOTSG00005033257) ENSOTSG00005033255 SLC25A36 (ENSOTSG00005033254) spsb4a (ENSOTSG00005033252) ENSOTSG00005033250 ENSOTSG00005033247 ENSOTSG00005033242 chrd (ENSOTSG00005033240) alp3 (ENSOTSG00005037268) ENSOTSG00005037262 PSMD2 (ENSOTSG00005037069) prss16 (ENSOTSG00005037067) dhrs12la (ENSOTSG00005037066) Rainbow trout MODERN SPECIES 19 ENSOMYG00000037636 ENSOMYG00000037604 ENSOMYG00000070221 ENSOMYG00000060003 ENSOMYG00000037526 ENSOMYG00000064208 ENSOMYG00000037470 ENSOMYG00000058394 ENSOMYG00000037364 ENSOMYG00000037359 ENSOMYG00000037347 ENSOMYG00000037339 lpar5b (ENSOMYG00000037327) gpr55a (ENSOMYG00000037324) ENSOMYG00000037228 efhd1 (ENSOMYG00000037192) #22 kcnj13 (ENSOMYG00000037177) #23 ENSOMYG00000037185 ENSOMYG00000055233 ENSOMYG00000072770 ENSOMYG00000050651 ENSOMYG00000056097 fat3a (ENSOMYG00000037163) ENSOMYG00000040992 ENSOMYG00000041004 ENSOMYG00000041014 ENSOMYG00000041018 SMCO4 (ENSOMYG00000041028) ENSOMYG00000060598 ENSOMYG00000041077 ENSOMYG00000041185 Salmo ANCESTRAL SPECIES 7 ENSGT00940000154369.g.b.a ENSGT01030000234629.C.b.a ENSGT00950000183086.a.a.b.h.a.a ENSGT00940000160165.a.c ENSGT00900000141083.c.b.c ENSGT00390000006095.d ENSGT00940000162075.db.b.a ENSGT00940000157522.d.b ENSGT00940000161398.e.a ENSGT00940000164578.a.a.a ENSGT00390000004360.a.a.b ENSGT00950000183115.a.a.a.b ENSGT00950000183136.b.b.i.b ENSGT01040000240444.A.b.b.e.b ENSGT01030000234571.b.b.a.a.a.b ENSGT00390000012058.c.a.d #22 ENSGT00990000203615.b.a.b.f #23 ENSGT00950000182923.B.a.f ENSGT00940000154981.bb.a.a ENSGT00940000166267.a.i ENSGT00940000160117.i.a ENSGT00940000153511.a.ob.b.a ENSGT00390000015987.l ENSGT00940000162662.lc.a.b ENSGT00940000162662.lc.a.a ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00920000149201 ENSGT00940000157189.d.c ENSGT00940000155956.c.b ENSGT00390000000002.a.b.j.a River trout MODERN SPECIES 18 ENSSTUG00000018228 RBP2 (ENSSTUG00000018242) COPB2 (ENSSTUG00000018264) ENSSTUG00000018500 mrps22 (ENSSTUG00000018509) ENSSTUG00000018557 PIK3CB (ENSSTUG00000018608) ENSSTUG00000019232 her13 (ENSSTUG00000019266) her8.2 (ENSSTUG00000019275) ENSSTUG00000019280 ITM2C (ENSSTUG00000019293) lpar5b (ENSSTUG00000019342) gpr55a (ENSSTUG00000019362) ENSSTUG00000019381 efhd1 (ENSSTUG00000019574) #22 kcnj13 (ENSSTUG00000019581) #23 GAL3ST2 (ENSSTUG00000019585) fat3a (ENSSTUG00000019622) ENSSTUG00000018350 ENSSTUG00000018367 ENSSTUG00000018422 hnrnpr (ENSSTUG00000018506) SMCO4 (ENSSTUG00000018533) ENSSTUG00000018540 ENSSTUG00000018568 ENSSTUG00000018577 ENSSTUG00000018626 ENSSTUG00000018641 si:ch211-132b12.2 (ENSSTUG00000018688) ccnp (ENSSTUG00000018782) Huchen MODERN SPECIES 2749 ENSHHUG00000052409 efhd1 (ENSHHUG00000052411) #22 kcnj13 (ENSHHUG00000052413) #23 GAL3ST2 (ENSHHUG00000052414) Northern pike MODERN SPECIES spsb4a (ENSELUG00000014517) ENSELUG00000033315 CLSTN2 (ENSELUG00000000534) rbp2a (ENSELUG00000000526) COPB2 (ENSELUG00000014429) mrps22 (ENSELUG00000014349) PIK3CB (ENSELUG00000014140) PER2 (ENSELUG00000014096) her13 (ENSELUG00000014037) her8.2 (ENSELUG00000014014) ENSELUG00000014008 ITM2C (ENSELUG00000013990) lpar5b (ENSELUG00000013976) gpr55a (ENSELUG00000013972) NGEF (ENSELUG00000013959) efhd1 (ENSELUG00000013937) #22 kcnj13 (ENSELUG00000013916) #23 GAL3ST2 (ENSELUG00000013891) fat3a (ENSELUG00000013858) ENSELUG00000013805 ENSELUG00000013742 ENSELUG00000032306 SMCO4 (ENSELUG00000013667) ENSELUG00000013655 ENSELUG00000028531 ENSELUG00000001562 ENSELUG00000013364 ENSELUG00000013528 ENSELUG00000013253 ENSELUG00000013194 ENSELUG00000013178 Otomorpha ANCESTRAL SPECIES 373 ENSGT00940000162075.a.b ENSGT00940000156342.c ENSGT00940000161398.f ENSGT00950000183115.a.a.b ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.b.b ENSGT00940000160117 ENSGT01040000240444.A.b.a.a ENSGT00940000156108 ENSGT00730000114072 Otophysi ANCESTRAL SPECIES 324 ENSGT00940000156342.c ENSGT00940000161398.f ENSGT00950000183115.a.a.b ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.b.b ENSGT00940000160117 ENSGT00940000169425 ENSGT00390000005285 Cyprinoidei ANCESTRAL SPECIES 129 ENSGT00940000156342.c ENSGT00940000161398.f ENSGT00950000183115.a.a.b ENSGT00950000183136.b.b ENSGT01040000240444.A.b.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.b.b.b ENSGT00940000160117.l ENSGT00940000166267.b.b.a ENSGT00940000160117.k.b ENSGT00940000169425 ENSGT00390000005285 ENSGT00940000156013 ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.b ENSGT00950000183086.a.a.b.h.a ENSGT01030000234629.C.c ENSGT00940000154308.D.c.b.b.b.a.b.b.b ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 189 ENSGT00390000012058.c.a.a #22 ENSGT00990000203615.b.a.b.g #23 ENSGT00950000182923.B.a.i ENSGT00940000154981.bb.a.q ENSGT00940000166267.b.b.b.b ENSGT00940000160117.l ENSGT00940000169425.b ENSGT00390000005285 ENSGT00940000156013.l ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00950000183086.a.a.b.h.a.d ENSGT01030000234629.C.c.b ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT00940000154369.g.b.e.a ENSGT00390000016324.l ENSGT00940000156948.i.a.a Cyprininae_a ANCESTRAL SPECIES 707 ENSGT00390000012058.c.a.a #22 ENSGT00990000203615.b.a.b.g #23 ENSGT00950000182923.B.a.i ENSGT00940000154981.bb.a.q ENSGT00940000166267.b.b.b.b ENSGT00940000160117.l Common carp reference MODERN SPECIES 39 stim1a (ENSCCRG00000002588) ENSCCRG00000028879 robo2 (ENSCCRG00000073716) ENSCCRG00000066568 ENSCCRG00000048198 ENSCCRG00000074854 ENSCCRG00000010327 rps5 (ENSCCRG00000010291) cab39 (ENSCCRG00000072406) itm2ca (ENSCCRG00000014977) gpr55a (ENSCCRG00000014987) ENSCCRG00000014990 ENSCCRG00000060642 ENSCCRG00000074207 ENSCCRG00000057716 efhd1 (ENSCCRG00000067118) #22 kcnj13 (ENSCCRG00000076232) #23 ENSCCRG00000082279 fat3a (ENSCCRG00000063995) ENSCCRG00000067250 ENSCCRG00000029090 usp16 (ENSCCRG00000029085) ENSCCRG00000080261 ENSCCRG00000066272 ENSCCRG00000082540 ENSCCRG00000064253 ENSCCRG00000075956 ENSCCRG00000011026 ENSCCRG00000011030 ENSCCRG00000028351 ENSCCRG00000071838 Golden-line barbel MODERN SPECIES 925 ENSSGRG00000040503 efhd1 (ENSSGRG00000040507) #22 kcnj13 (ENSSGRG00000040508) #23 GAL3ST2 (ENSSGRG00000040509) fat3a (ENSSGRG00000040517) ENSSGRG00000040556 ENSSGRG00000040562 smco4 (ENSSGRG00000040563) smco4 (ENSSGRG00000040565) ENSSGRG00000040570 Goldfish MODERN SPECIES 3216 ENSCARG00000050377 ENSCARG00000050394 ENSCARG00000050410 efhd1 (ENSCARG00000050423) #22 kcnj13 (ENSCARG00000050497) #23 GAL3ST2 (ENSCARG00000050514) ENSCARG00000050527 ENSCARG00000050530 Cyprininae ANCESTRAL SPECIES 69 ENSGT00550000074977.b ENSGT00390000002843.a ENSGT00390000010806.ac ENSGT00390000004360.a.b.a.b.e ENSGT00950000183115.a.b.a ENSGT00950000183136.b.b.p.b.a ENSGT01040000240444.A.b.b.g ENSGT01030000234571.b.b.a.a.a.f ENSGT00940000165425.b ENSGT00390000010806.`c ENSGT00390000004360.a.b.a.b.f ENSGT00950000183115.a.b.b ENSGT00950000183136.b.b.p.b.b ENSGT01040000240444.A.b.b.h ENSGT01030000234571.b.b.a.a.a.e ENSGT00390000012058.c.a.b #22 ENSGT00990000203615.b.a.b.h #23 ENSGT00950000182923.B.a.j ENSGT00940000154981.bb.a.r ENSGT00940000166267.b.b.b.a ENSGT00940000160117.k.b ENSGT00940000169425.a Goldfish DUPLICATION Goldfish MODERN SPECIES 6 ENSCARG00000008029 ENSCARG00000008035 ENSCARG00000008039 EPHA4 (ENSCARG00000008070) ENSCARG00000008636 pxylp1 (ENSCARG00000008647) SLC25A36 (ENSCARG00000008668) ENSCARG00000008693 ftr72 (ENSCARG00000008685) ENSCARG00000008698 ENSCARG00000008700 spsb4b (ENSCARG00000008708) CLSTN2 (ENSCARG00000008713) ENSCARG00000008725 ENSCARG00000008761 efhd1 (ENSCARG00000009024) #22 kcnj13 (ENSCARG00000009029) #23 GAL3ST2 (ENSCARG00000009035) robo2 (ENSCARG00000009107) ENSCARG00000010820 ROBO1 (ENSCARG00000010981) ENSCARG00000015097 ENSCARG00000016037 rps5 (ENSCARG00000016046) cab39 (ENSCARG00000016070) itm2ca (ENSCARG00000016085) lpar5b (ENSCARG00000016095) gpr55a (ENSCARG00000016099) kcnj13 (ENSCARG00000016108) #23 efhd1 (ENSCARG00000016122) #22 NGEF (ENSCARG00000016140) Goldfish MODERN SPECIES 6 postnb (ENSCARG00000023376) spartb (ENSCARG00000023295) dclk1b (ENSCARG00000022927) mab21l1 (ENSCARG00000022901) NBEA (ENSCARG00000019012) ENSCARG00000018151 trmt9b (ENSCARG00000018104) PDS5B (ENSCARG00000017951) ENSCARG00000017897 inpp5ka (ENSCARG00000016618) tekt1 (ENSCARG00000016532) ENSCARG00000016519 mag (ENSCARG00000016498) gpr55a (ENSCARG00000016489) NGEF (ENSCARG00000016140) efhd1 (ENSCARG00000016122) #22 kcnj13 (ENSCARG00000016108) #23 gpr55a (ENSCARG00000016099) lpar5b (ENSCARG00000016095) itm2ca (ENSCARG00000016085) cab39 (ENSCARG00000016070) rps5 (ENSCARG00000016046) ENSCARG00000016037 ENSCARG00000015097 ROBO1 (ENSCARG00000010981) ENSCARG00000010820 robo2 (ENSCARG00000009107) GAL3ST2 (ENSCARG00000009035) kcnj13 (ENSCARG00000009029) #23 efhd1 (ENSCARG00000009024) #22 ENSCARG00000008761 Cyprininae_a ANCESTRAL SPECIES 38 ENSGT01100000263535.a.a.k.a ENSGT00940000155158.r ENSGT00390000000214.a.a.e.b ENSGT00940000165744 ENSGT01060000248588.b.hb.b ENSGT00940000156324.f.a.b ENSGT00940000154477.jc.a.b ENSGT00550000074977.b ENSGT00390000002843.a ENSGT00390000010806.ac ENSGT00390000004360.a.b.a.b.f ENSGT00950000183115.a.b.b ENSGT00950000183136.b.b.p.b.b ENSGT01040000240444.A.b.b.h ENSGT01030000234571.b.b.a.a.a.e ENSGT00390000012058.c.a.b #22 ENSGT00990000203615.b.a.b.h #23 ENSGT00950000182923.B.a.j ENSGT00940000154981.bb.a.r ENSGT00940000166267.b.b.b.a ENSGT00940000160117.k.b ENSGT00940000169425.a ENSGT00390000005285 ENSGT00940000156013.l ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.a.a.a.a.a.a.b ENSGT00950000183086.a.a.b.h.a.d ENSGT01030000234629.C.c.b ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.e.a ENSGT00940000154369.g.b.e.a ENSGT00390000016324.l ENSGT00940000156948.i.a.a Common carp reference MODERN SPECIES 26 ENSCCRG00000004937 rhoga (ENSCCRG00000080607) stim1a (ENSCCRG00000075655) ENSCCRG00000047313 ENSCCRG00000019433 robo2 (ENSCCRG00000002019) ENSCCRG00000078192 ENSCCRG00000014924 ENSCCRG00000010331 rps5 (ENSCCRG00000081236) cab39 (ENSCCRG00000010335) lpar5b (ENSCCRG00000059370) gpr55a (ENSCCRG00000054325) ENSCCRG00000019002 ENSCCRG00000018973 efhd1 (ENSCCRG00000042422) #22 kcnj13 (ENSCCRG00000063062) #23 ENSCCRG00000078408 fat3a (ENSCCRG00000018989) ENSCCRG00000027122 ENSCCRG00000069762 usp16 (ENSCCRG00000024052) usp16 (ENSCCRG00000024055) ENSCCRG00000080057 ENSCCRG00000053636 ENSCCRG00000081656 ENSCCRG00000055486 spsb4b (ENSCCRG00000022582) ENSCCRG00000022580 ENSCCRG00000022567 ENSCCRG00000074832 Golden-line barbel MODERN SPECIES 73 si:dkey-24p1.1 (ENSSGRG00000002995) irgq2 (ENSSGRG00000003011) RHOG (ENSSGRG00000003023) stim1a (ENSSGRG00000003046) ENSSGRG00000003052 ENSSGRG00000003063 robo2 (ENSSGRG00000003163) ROBO1 (ENSSGRG00000004612) ENSSGRG00000004637 ENSSGRG00000004639 ENSSGRG00000004641 rps5 (ENSSGRG00000004647) cab39 (ENSSGRG00000004807) itm2ca (ENSSGRG00000004943) ENSSGRG00000004947 efhd1 (ENSSGRG00000004966) #22 kcnj13 (ENSSGRG00000004969) #23 GAL3ST2 (ENSSGRG00000004971) GAL3ST2 (ENSSGRG00000004973) ENSSGRG00000004977 ENSSGRG00000004978 fat3a (ENSSGRG00000005012) ENSSGRG00000006298 ENSSGRG00000006302 ENSSGRG00000006306 usp16 (ENSSGRG00000006314) CLSTN2 (ENSSGRG00000006350) spsb4b (ENSSGRG00000006694) ENSSGRG00000006699 ENSSGRG00000006700 SLC25A36 (ENSSGRG00000006703) Zebrafish MODERN SPECIES 6 ENSDARG00000028784 ENSDARG00000039065 ENSDARG00000078366 robo2 (ENSDARG00000014891) ROBO1 (ENSDARG00000026784) ENSDARG00000097480 MSH5 (ENSDARG00000077479) ENSDARG00000097804 rps5 (ENSDARG00000043453) cab39 (ENSDARG00000043451) itm2ca (ENSDARG00000043448) lpar5b (ENSDARG00000068638) gpr55a (ENSDARG00000043447) NGEF (ENSDARG00000076179) ENSDARG00000068637 efhd1 (ENSDARG00000043446) #22 kcnj13 (ENSDARG00000043443) #23 GAL3ST2 (ENSDARG00000079502) fat3a (ENSDARG00000033840) mtnr1ba (ENSDARG00000053833) ENSDARG00000039661 smco4 (ENSDARG00000097824) usp16 (ENSDARG00000090935) usp16 (ENSDARG00000060633) ENSDARG00000092025 ENSDARG00000094067 ENSDARG00000095528 ENSDARG00000076819 ENSDARG00000078101 ENSDARG00000094350 ENSDARG00000093532 Characiphysae ANCESTRAL SPECIES 94 ENSGT01080000257333.B ENSGT00940000157259.o ENSGT00950000183199.a.a.x ENSGT00390000010091.c ENSGT00950000183078.b.a.b ENSGT00940000164285.b ENSGT00390000001474 ENSGT00390000008920.c.b ENSGT00940000159702 ENSGT00390000001278.a ENSGT00550000074807.c ENSGT00940000164977.b ENSGT00940000161634 ENSGT00940000160308 ENSGT00390000007686.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.o ENSGT00940000166267.b.b ENSGT00940000160117 ENSGT00940000169425 ENSGT00390000005285 ENSGT00530000063946.a.b ENSGT00940000156294.c.b ENSGT00940000164824.B ENSGT00940000159077.i ENSGT00940000159077.j ENSGT00940000156253.a.b ENSGT00390000007224.b ENSGT00940000156013 Channel catfish MODERN SPECIES 8 ENSIPUG00000019680 mpzl2 (ENSIPUG00000019640) cd3e (ENSIPUG00000019624) cd3g (ENSIPUG00000019588) TMEM25 (ENSIPUG00000019580) sik3 (ENSIPUG00000019515) SIDT2 (ENSIPUG00000019486) ENSIPUG00000019440 paf1 (ENSIPUG00000019404) GMFG (ENSIPUG00000019363) Samd4b (ENSIPUG00000019318) psma6l (ENSIPUG00000019280) otx5 (ENSIPUG00000019269) ENSIPUG00000019223 DMWD (ENSIPUG00000019208) efhd1 (ENSIPUG00000019191) #22 kcnj13 (ENSIPUG00000019185) #23 GAL3ST2 (ENSIPUG00000019180) fat3a (ENSIPUG00000019119) mtnr1ba (ENSIPUG00000019115) CLCN2 (ENSIPUG00000019019) eif4g1 (ENSIPUG00000018901) psmd2 (ENSIPUG00000018752) ENSIPUG00000018745 ENSIPUG00000018735 ENSIPUG00000018727 megf6 (ENSIPUG00000018682) mff (ENSIPUG00000018667) mrpl44 (ENSIPUG00000018656) agfg1 (ENSIPUG00000018576) KLHL17 (ENSIPUG00000018551) Characiphysae_b ANCESTRAL SPECIES 90 ENSGT01080000257333.B ENSGT00940000157259.o ENSGT00950000183199.a.a.x ENSGT00390000010091.c ENSGT00950000183078.b.a.b ENSGT00940000164285.b ENSGT00390000001474 ENSGT00390000008920.c.b ENSGT00940000159702 ENSGT00390000001278.a ENSGT00550000074807.c ENSGT00940000164977.b ENSGT00940000161634 ENSGT00940000160308 ENSGT00390000007686.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.o ENSGT00940000166267.b.b ENSGT00940000160117 ENSGT00940000169425 ENSGT00390000005285 ENSGT00530000063946.a.b ENSGT00940000156294.c.b ENSGT00940000164824.A ENSGT00940000164824.B ENSGT00940000159077.i ENSGT00940000159077.j ENSGT00940000156253.a.b ENSGT00390000007224.b Electric eel MODERN SPECIES 437 ENSEEEG00000000250 ENSEEEG00000000282 otx5 (ENSEEEG00000000293) psma6l (ENSEEEG00000000315) DMWD (ENSEEEG00000000366) efhd1 (ENSEEEG00000000396) #22 kcnj13 (ENSEEEG00000000426) #23 GAL3ST2 (ENSEEEG00000000433) ENSEEEG00000000447 SAMD4B (ENSEEEG00000000500) GMFG (ENSEEEG00000000615) paf1 (ENSEEEG00000000625) socs9 (ENSEEEG00000000643) Characoidei ANCESTRAL SPECIES 106 ENSGT00990000205064 ENSGT01080000257333.B ENSGT00940000157259.o ENSGT00950000183199.a.a.x ENSGT00390000010091.c ENSGT00950000183078.b.a.b ENSGT00940000164285.b ENSGT00390000001474 ENSGT00390000008920.c.b ENSGT00940000159702 ENSGT00390000001278.a ENSGT00550000074807.c ENSGT00940000164977.b ENSGT00940000160308 ENSGT00390000007686.a ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00950000182923.B.a ENSGT00940000154981.bb.a.o ENSGT00940000166267.b.b ENSGT00940000160117 ENSGT00940000169425 ENSGT00390000005285 ENSGT00530000063946.a.b ENSGT00940000156294.c.b Mexicana tetra MODERN SPECIES ENSAMXG00000029410 ENSAMXG00000034924 ENSAMXG00000007621 SIK3 (ENSAMXG00000035205) PAFAH1B2 (ENSAMXG00000039546) SIDT2 (ENSAMXG00000020824) ENSAMXG00000035352 socs9 (ENSAMXG00000030036) SAMD4B (ENSAMXG00000020905) GMFG (ENSAMXG00000020913) paf1 (ENSAMXG00000020925) psma6l (ENSAMXG00000020935) ENSAMXG00000020955 ENSAMXG00000020977 DMWD (ENSAMXG00000021009) efhd1 (ENSAMXG00000035065) #22 kcnj13 (ENSAMXG00000033074) #23 ENSAMXG00000035131 GAL3ST2 (ENSAMXG00000040524) ENSAMXG00000029511 fat3a (ENSAMXG00000001833) mtnr1ba (ENSAMXG00000035210) SLC36A4 (ENSAMXG00000035180) smco4 (ENSAMXG00000026101) usp16 (ENSAMXG00000001936) scaf4b (ENSAMXG00000001958) ENSAMXG00000031037 igsf11 (ENSAMXG00000011812) lrfn1 (ENSAMXG00000011810) ENSAMXG00000031611 psmd2 (ENSAMXG00000011807) Red-bellied piranha MODERN SPECIES 517 SIDT2 (ENSPNAG00000014215) ENSPNAG00000003053 socs9 (ENSPNAG00000014237) paf1 (ENSPNAG00000003063) GMFG (ENSPNAG00000014266) SAMD4B (ENSPNAG00000014309) ENSPNAG00000003114 psma6l (ENSPNAG00000014461) ENSPNAG00000014472 MAP4K1 (ENSPNAG00000014496) DMWD (ENSPNAG00000003153) efhd1 (ENSPNAG00000014534) #22 kcnj13 (ENSPNAG00000014549) #23 Osteoglossiformes ANCESTRAL SPECIES 61 ENSGT01030000234590.A.a.b ENSGT00940000163454.b ENSGT00990000205159 ENSGT00390000011810 ENSGT00940000153123.A ENSGT00390000015987 ENSGT00940000160117 ENSGT00940000166267.a ENSGT00940000154981.cb ENSGT00950000182923.B.a ENSGT00390000010564 ENSGT00390000012058.c.a #22 ENSGT00990000203615.b.a.b #23 ENSGT00940000156108.c ENSGT01030000234571.b.b.a.a.a ENSGT01040000240444.A.b.a.a ENSGT01040000240444.A.b.b ENSGT00950000183115.a ENSGT00390000004360.a.b.b ENSGT00940000164578.a.a ENSGT00940000161398.f ENSGT00940000156342.d ENSGT00940000157522 ENSGT00900000141083.c.a ENSGT00940000160165.a ENSGT00950000183086.a.a.b.h.a ENSGT01030000234629.C.e Asian bonytongue MODERN SPECIES 1 mre11a (ENSSFOG00015015723) GPR83 (ENSSFOG00015015701) panx1a (ENSSFOG00015015677) ENSSFOG00015015572 ENSSFOG00015015545 ENSSFOG00015015532 ENSSFOG00015027852 med17 (ENSSFOG00015015449) ENSSFOG00015015410 SMCO4 (ENSSFOG00015015402) SLC36A4 (ENSSFOG00015015361) ENSSFOG00015015335 FAT3 (ENSSFOG00015015280) ENSSFOG00015015259 SMCO1 (ENSSFOG00015015249) efhd1 (ENSSFOG00015026745) #22 kcnj13 (ENSSFOG00015015213) #23 gigyf2 (ENSSFOG00015015193) NGEF (ENSSFOG00015015175) GPR55 (ENSSFOG00015015163) gpr55a (ENSSFOG00015015155) itm2cb (ENSSFOG00015015139) CAB39 (ENSSFOG00015027019) her8.2 (ENSSFOG00015015100) hes6 (ENSSFOG00015015081) PER2 (ENSSFOG00015015057) PIK3CB (ENSSFOG00015015008) copb2 (ENSSFOG00015014936) RBP2 (ENSSFOG00015014921) CLSTN2 (ENSSFOG00015014863) spsb4b (ENSSFOG00015032747) P. kingsleyae MODERN SPECIES 111 GIT1 (ENSPKIG00000007974) ankrd13b (ENSPKIG00000008133) ENSPKIG00000008246 SSH2 (ENSPKIG00000008330) slc6a4a (ENSPKIG00000008432) ENSPKIG00000008454 ncbp3 (ENSPKIG00000008466) rap1gap2a (ENSPKIG00000008498) SLC36A4 (ENSPKIG00000008540) ENSPKIG00000008575 ENSPKIG00000008595 FAT3 (ENSPKIG00000008780) GAL3ST2 (ENSPKIG00000009123) GAL3ST2 (ENSPKIG00000009144) SMCO1 (ENSPKIG00000009158) efhd1 (ENSPKIG00000009171) #22 ENSPKIG00000009188 GIGYF2 (ENSPKIG00000009220) kcnj13 (ENSPKIG00000009260) #23 NGEF (ENSPKIG00000009273) GPR55 (ENSPKIG00000009300) gpr55a (ENSPKIG00000009312) itm2cb (ENSPKIG00000009323) CAB39 (ENSPKIG00000009349) her8.2 (ENSPKIG00000009382) hes6 (ENSPKIG00000009399) PER2 (ENSPKIG00000009456) PIK3CB (ENSPKIG00000009555) copb2 (ENSPKIG00000009722) rbp2a (ENSPKIG00000009801) ENSPKIG00000009866 Spotted gar MODERN SPECIES 652 MASP1 (ENSLOCG00000009432) ostn (ENSLOCG00000009421) ENSLOCG00000009413 GMNC (ENSLOCG00000009396) IL1RAP (ENSLOCG00000009378) fgf12a (ENSLOCG00000009371) ENSLOCG00000009364 parla (ENSLOCG00000009339) ENSLOCG00000009321 cldn15lb (ENSLOCG00000009302) atg16l1 (ENSLOCG00000009283) saga (ENSLOCG00000009254) ENSLOCG00000009248 DGKD (ENSLOCG00000009226) ENSLOCG00000009211 efhd1 (ENSLOCG00000009199) #22 kcnj13 (ENSLOCG00000009192) #23 gigyf2 (ENSLOCG00000009165) ENSLOCG00000009160 ENSLOCG00000009151 DUSP28 (ENSLOCG00000009143) sft2d3 (ENSLOCG00000017411) WDR33 (ENSLOCG00000009122) ENSLOCG00000009112 polr2d (ENSLOCG00000009106) ilkap (ENSLOCG00000009095) ERFE (ENSLOCG00000009081) zgc:162872 (ENSLOCG00000009061) IWS1 (ENSLOCG00000009046) ENSLOCG00000009023 ANO7 (ENSLOCG00000009004)