Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154025 #22
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	1172															ENSGT00940000155594 #21	ENSGT00940000154025.a #22
Euteleostomi	ANCESTRAL SPECIES	797														ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22
Sarcopterygii	ANCESTRAL SPECIES	509														ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000166965	ENSGT00390000010763	ENSGT00940000159342 #23
Tetrapoda	ANCESTRAL SPECIES	152	ENSGT01000000217612	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000166965	ENSGT00390000010763	ENSGT00940000159342 #23
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000004681 #29	ENSGT00740000115898	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000162943	ENSGT00940000153378.a.a
Mammalia	ANCESTRAL SPECIES	3	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000162943
Theria	ANCESTRAL SPECIES	7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Eutheria	ANCESTRAL SPECIES	15	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Boreoeutheria	ANCESTRAL SPECIES	19	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Laurasiatheria	ANCESTRAL SPECIES	18	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Laurasiatheria_a	ANCESTRAL SPECIES	20	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	20	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	19	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Equus	ANCESTRAL SPECIES	14	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Horse	MODERN SPECIES	30	WDR97 (ENSECAG00000010600) #7	MAF1 (ENSECAG00000006366) #8	SHARPIN (ENSECAG00000001400) #9	CYC1 (ENSECAG00000020538) #10	GPAA1 (ENSECAG00000013668) #11	EXOSC4 (ENSECAG00000013658) #12	OPLAH (ENSECAG00000012059) #13	SMPD5 (ENSECAG00000011998) #14	SPATC1 (ENSECAG00000009731) #15	ENSECAG00000058594 #16	GRINA (ENSECAG00000006162) #17	PARP10A (ENSECAG00000019881) #18	PLEC (ENSECAG00000015514) #19	NRBP2 (ENSECAG00000009940) #20	PUF60 (ENSECAG00000024681) #21	SCRIB (ENSECAG00000013823) #22	FAM83H (ENSECAG00000001411) #23	MAPK15 (ENSECAG00000055407) #24	CCDC166 (ENSECAG00000043083) #25	ENSECAG00000012218 #26	ZNF623 (ENSECAG00000001299) #27	ENSECAG00000058513 #28	GFUS (ENSECAG00000022267) #29	PYCR3 (ENSECAG00000019384) #30	ENSECAG00000035597 #31	EEF1D (ENSECAG00000007976) #32	NAPRT (ENSECAG00000018111) #33	MROH6 (ENSECAG00000032692) #34	TIGD5 (ENSECAG00000030758) #35	ZC3H3 (ENSECAG00000012556) #36	MAFA (ENSECAG00000031791) #37
Donkey	MODERN SPECIES	3	ENSEASG00005038798	MAF1 (ENSEASG00005010179) #8	SHARPIN (ENSEASG00005010177) #9	CYC1 (ENSEASG00005010174) #10	GPAA1 (ENSEASG00005010170) #11	EXOSC4 (ENSEASG00005027640) #12	OPLAH (ENSEASG00005009816) #13	ENSEASG00005009745 #14	SPATC1 (ENSEASG00005027891) #15	GRINA (ENSEASG00005009735) #17	PLEC (ENSEASG00005009714) #19	ENSEASG00005035365 #20	ENSEASG00005009702 #20	PUF60 (ENSEASG00005009695) #21	FAM83H (ENSEASG00005009670) #23	SCRIB (ENSEASG00005009676) #22	ENSEASG00005009666 #24	CCDC166 (ENSEASG00005035820) #25	ENSEASG00005024520 #26	ZNF623 (ENSEASG00005033703) #27	ENSEASG00005029910 #28	GFUS (ENSEASG00005009659) #29	PYCR3 (ENSEASG00005009658) #30	TIGD5 (ENSEASG00005035122) #35	EEF1D (ENSEASG00005009652) #32	ENSEASG00005030288 #31	NAPRT (ENSEASG00005009637) #33	MROH6 (ENSEASG00005009627) #34	GSDMD (ENSEASG00005009624)	ZC3H3 (ENSEASG00005009621) #36	MAFA (ENSEASG00005038264) #37
Chiroptera	ANCESTRAL SPECIES	27	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Microchiroptera	ANCESTRAL SPECIES	27	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Greater horseshoe bat	MODERN SPECIES	5	ENSRFEG00010019988	MAF1 (ENSRFEG00010019881) #8	SHARPIN (ENSRFEG00010019821) #9	CYC1 (ENSRFEG00010019764) #10	GPAA1 (ENSRFEG00010019607) #11	EXOSC4 (ENSRFEG00010019554) #12	OPLAH (ENSRFEG00010019484) #13	ENSRFEG00010019431 #14	SPATC1 (ENSRFEG00010019364) #15	GRINA (ENSRFEG00010019334) #17	PARP10 (ENSRFEG00010019148) #18	PLEC (ENSRFEG00010018286) #19	ENSRFEG00010018111	NRBP2 (ENSRFEG00010018055) #20	PUF60 (ENSRFEG00010017712) #21	SCRIB (ENSRFEG00010017571) #22	IQANK1 (ENSRFEG00010017516)	FAM83H (ENSRFEG00010017388) #23	ENSRFEG00010017348 #25	MAPK15 (ENSRFEG00010017242) #24	GFUS (ENSRFEG00010017180) #29	PYCR3 (ENSRFEG00010017055) #30	TIGD5 (ENSRFEG00010017037) #35	EEF1D (ENSRFEG00010016844) #32	NAPRT (ENSRFEG00010016331) #33	MROH6 (ENSRFEG00010016108) #34	GSDMD (ENSRFEG00010016049)	ZC3H3 (ENSRFEG00010015846) #36	MAFA (ENSRFEG00010015820) #37	RHPN1 (ENSRFEG00010015586)	ZNF696 (ENSRFEG00010015549) ##28
Carnivora	ANCESTRAL SPECIES	22	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Caniformia	ANCESTRAL SPECIES	23	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Caniformia_b	ANCESTRAL SPECIES	22	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Ursidae	ANCESTRAL SPECIES	49	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445.c #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.c.b #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Giant Panda	MODERN SPECIES	19	MROH1 (ENSAMEG00000005932)	ENSAMEG00000005999	ENSAMEG00000006009	WDR97 (ENSAMEG00000006016) #7	MAF1 (ENSAMEG00000006029) #8	ENSAMEG00000024448 #10	GPAA1 (ENSAMEG00000006068) #11	EXOSC4 (ENSAMEG00000006093) #12	OPLAH (ENSAMEG00000006104) #13	ENSAMEG00000006154 #14	SPATC1 (ENSAMEG00000006165) #15	GRINA (ENSAMEG00000029040) #17	PLEC (ENSAMEG00000006191) #19	ENSAMEG00000026841	NRBP2 (ENSAMEG00000006350) #20	SCRIB (ENSAMEG00000006431) #22	FAM83H (ENSAMEG00000030201) #23	MAPK15 (ENSAMEG00000006484) #24	ENSAMEG00000028835 #25	ZNF623 (ENSAMEG00000006529) #27	GFUS (ENSAMEG00000006531) #29	TIGD5 (ENSAMEG00000029168) #35	EEF1D (ENSAMEG00000006602) #32	NAPRT (ENSAMEG00000006608) #33	MROH6 (ENSAMEG00000006631) #34	GSDMD (ENSAMEG00000006635)	ENSAMEG00000006656 #36	ENSAMEG00000025392 #37	ENSAMEG00000012490	ENSAMEG00000023725	ENSAMEG00000012455
Ursus	ANCESTRAL SPECIES	96	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445.c #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.c.b #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28	ENSGT00940000154560.b
Polar bear	MODERN SPECIES	516	ENSUMAG00000019845	MROH1 (ENSUMAG00000019943)	ENSUMAG00000020785	ENSUMAG00000020791	MAF1 (ENSUMAG00000020803) #8	SHARPIN (ENSUMAG00000020808) #9	CYC1 (ENSUMAG00000020821) #10	ENSUMAG00000020824 #11	EXOSC4 (ENSUMAG00000020831) #12	OPLAH (ENSUMAG00000020885) #13	ENSUMAG00000021052 #16	SPATC1 (ENSUMAG00000021054) #15	ENSUMAG00000021059 #19	NRBP2 (ENSUMAG00000000258) #20	PUF60 (ENSUMAG00000000272) #21	ENSUMAG00000000519 #22	ZNF623 (ENSUMAG00000000693) #27	GFUS (ENSUMAG00000000700) #29	ENSUMAG00000000714 #30	ENSUMAG00000000721 #30	ENSUMAG00000000728 #32	NAPRT (ENSUMAG00000000845) #33	GSDMD (ENSUMAG00000001062)	ZC3H3 (ENSUMAG00000001070) #36	RHPN1 (ENSUMAG00000001133)	ZNF696 (ENSUMAG00000001246) ##28	ENSUMAG00000001260	LY6H (ENSUMAG00000001269)
Mustelinae	ANCESTRAL SPECIES	91	ENSGT00940000156930	ENSGT00940000163790	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a
Ferret	MODERN SPECIES	467	ENSMPUG00000007024	HGH1 (ENSMPUG00000007077)	MAF1 (ENSMPUG00000007125) #8	SHARPIN (ENSMPUG00000007133) #9	CYC1 (ENSMPUG00000007180) #10	GPAA1 (ENSMPUG00000007251) #11	EXOSC4 (ENSMPUG00000007260) #12	OPLAH (ENSMPUG00000007266) #13	ENSMPUG00000007287 #14	SPATC1 (ENSMPUG00000007295) #15	GRINA (ENSMPUG00000007320) #17	PLEC (ENSMPUG00000007329) #19	ENSMPUG00000020168	NRBP2 (ENSMPUG00000008013) #20	PUF60 (ENSMPUG00000008137) #21	SCRIB (ENSMPUG00000008151) #22	FAM83H (ENSMPUG00000008168) #23	MAPK15 (ENSMPUG00000008183) #24	ZNF623 (ENSMPUG00000020169) #27	GFUS (ENSMPUG00000008243) #29	PYCR3 (ENSMPUG00000008251) #30	ENSMPUG00000008287 #32	NAPRT (ENSMPUG00000008297) #33	ENSMPUG00000008307	ZC3H3 (ENSMPUG00000008357) #36	ENSMPUG00000008372	RHPN1 (ENSMPUG00000008382)	ENSMPUG00000008485	GLI4 (ENSMPUG00000008492)	ENSMPUG00000008500	GPIHBP1 (ENSMPUG00000008502)
American mink	MODERN SPECIES	551														NRBP2 (ENSNVIG00000008328) #20	PUF60 (ENSNVIG00000008683) #21	SCRIB (ENSNVIG00000008912) #22	FAM83H (ENSNVIG00000010453) #23	MAPK15 (ENSNVIG00000010460) #24	ZNF623 (ENSNVIG00000010487) #27	GFUS (ENSNVIG00000010493) #29	PYCR3 (ENSNVIG00000010514) #30	ENSNVIG00000010553 #32	ZC3H3 (ENSNVIG00000010624) #36	MAFA (ENSNVIG00000010654) #37	ENSNVIG00000010668	ZNF696 (ENSNVIG00000010681) ##28	GLI4 (ENSNVIG00000010691)	ZFP41 (ENSNVIG00000010717)	GPIHBP1 (ENSNVIG00000010726)	LY6H (ENSNVIG00000010743)	LY6L (ENSNVIG00000010760)
Canidae	ANCESTRAL SPECIES	33	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Dog	MODERN SPECIES	4	BOP1 (ENSCAFG00845009314)	MROH1 (ENSCAFG00845008501)	TSSK5 (ENSCAFG00845008284)	HGH1 (ENSCAFG00845008231)	WDR97 (ENSCAFG00845008119) #7	MAF1 (ENSCAFG00845008053) #8	ENSCAFG00845008013 #9	GPAA1 (ENSCAFG00845007719) #11	EXOSC4 (ENSCAFG00845007577) #12	OPLAH (ENSCAFG00845007462) #13	SMPD5 (ENSCAFG00845007381) #14	ENSCAFG00845007196 #15	PLEC (ENSCAFG00845006165) #19	NRBP2 (ENSCAFG00845005761) #20	PUF60 (ENSCAFG00845005630) #21	SCRIB (ENSCAFG00845016531) #22	FAM83H (ENSCAFG00845016203) #23	MAPK15 (ENSCAFG00845016101) #24	ENSCAFG00845016076 #25	ZNF623 (ENSCAFG00845016043) #27	TSTA3 (ENSCAFG00845015979) #29	PYCR3 (ENSCAFG00845015775) #30	TIGD5 (ENSCAFG00845015729) #35	EEF1D (ENSCAFG00845015590) #32	NAPRT (ENSCAFG00845015437) #33	MROH6 (ENSCAFG00845015361) #34	GSDMD (ENSCAFG00845015279)	ZC3H3 (ENSCAFG00845015168) #36	MAFA (ENSCAFG00845015129) #37	RHPN1 (ENSCAFG00845015006)	ENSCAFG00845014905
Dingo	MODERN SPECIES	88	MAF1 (ENSCAFG00020018843) #8	ENSCAFG00020018834 #9	CYC1 (ENSCAFG00020018828) #10	GPAA1 (ENSCAFG00020018822) #11	EXOSC4 (ENSCAFG00020018820) #12	ENSCAFG00020018812 #13	ENSCAFG00020018807 #13	ENSCAFG00020018801 #14	SPATC1 (ENSCAFG00020018794) #15	GRINA (ENSCAFG00020018791) #17	ENSCAFG00020018787 #19	PLEC (ENSCAFG00020018777) #19	EPPK1 (ENSCAFG00020018775)	NRBP2 (ENSCAFG00020018770) #20	PUF60 (ENSCAFG00020018754) #21	ENSCAFG00020018744 #22	FAM83H (ENSCAFG00020018741) #23	MAPK15 (ENSCAFG00020018736) #24	ENSCAFG00020018733 #25	ZNF623 (ENSCAFG00020018732) #27	GFUS (ENSCAFG00020018688) #29	PYCR3 (ENSCAFG00020018685) #30	TIGD5 (ENSCAFG00020018684) #35	ENSCAFG00020018677 #32	NAPRT (ENSCAFG00020018667) #33	MROH6 (ENSCAFG00020018660) #34	GSDMD (ENSCAFG00020018657)	ZC3H3 (ENSCAFG00020018654) #36	RHPN1 (ENSCAFG00020018648)	ZNF696 (ENSCAFG00020018647) ##28	GLI4 (ENSCAFG00020018643)
Red fox	MODERN SPECIES	251	BOP1 (ENSVVUG00000007851)	MROH1 (ENSVVUG00000008853)	ENSVVUG00000009546	ENSVVUG00000009569	WDR97 (ENSVVUG00000009580) #7	ENSVVUG00000009627 #8	CYC1 (ENSVVUG00000009653) #10	GPAA1 (ENSVVUG00000009667) #11	EXOSC4 (ENSVVUG00000009675) #12	SPATC1 (ENSVVUG00000009880) #15	ENSVVUG00000009887 #17	PLEC (ENSVVUG00000010214) #19	ENSVVUG00000022500	NRBP2 (ENSVVUG00000022506) #20	PUF60 (ENSVVUG00000022527) #21	SCRIB (ENSVVUG00000022534) #22	ENSVVUG00000022548 #23	MAPK15 (ENSVVUG00000022543) #24	ZNF623 (ENSVVUG00000022555) #27	TSTA3 (ENSVVUG00000022556) #29	PYCR3 (ENSVVUG00000022559) #30	ENSVVUG00000022562 #32	NAPRT (ENSVVUG00000022569) #33	MROH6 (ENSVVUG00000022579) #34	GSDMD (ENSVVUG00000022593)	ZC3H3 (ENSVVUG00000022609) #36	RHPN1 (ENSVVUG00000022643)	ZNF696 (ENSVVUG00000022650) ##28	ENSVVUG00000022654	ENSVVUG00000022662	LY6H (ENSVVUG00000022664)
Felidae	ANCESTRAL SPECIES	22	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Panthera	ANCESTRAL SPECIES	16	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT01020000230346.C.h.a.a.a.a	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000153837.a.a	ENSGT00940000163493.h ##28
Panthera_a	ANCESTRAL SPECIES	16	ENSGT00940000156930	ENSGT00940000163790	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT01020000230346.C.h.a.a.a.a	ENSGT00940000163183 #27	ENSGT00390000012818.p	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000153837.a.a
leopard	MODERN SPECIES	172	SCX (ENSPPRG00000008268)	BOP1 (ENSPPRG00000008442)	ENSPPRG00000011786	HGH1 (ENSPPRG00000012863)	MAF1 (ENSPPRG00000014644) #8	SHARPIN (ENSPPRG00000015953) #9	CYC1 (ENSPPRG00000017350) #10	GPAA1 (ENSPPRG00000018795) #11	EXOSC4 (ENSPPRG00000019782) #12	OPLAH (ENSPPRG00000024633) #13	ENSPPRG00000024542 #14	GRINA (ENSPPRG00000024075) #17	PLEC (ENSPPRG00000000838) #19	ENSPPRG00000001341	PUF60 (ENSPPRG00000003257) #21	SCRIB (ENSPPRG00000005252) #22	FAM83H (ENSPPRG00000005660) #23	ENSPPRG00000006128 #24	CCDC166 (ENSPPRG00000006252) #25	ENSPPRG00000006461	ZNF623 (ENSPPRG00000017952) #27	ENSPPRG00000006499	GFUS (ENSPPRG00000006571) #29	PYCR3 (ENSPPRG00000007124) #30	TIGD5 (ENSPPRG00000018004) #35	ENSPPRG00000007970 #32	NAPRT (ENSPPRG00000008927) #33	GSDMD (ENSPPRG00000011299)	ZC3H3 (ENSPPRG00000011707) #36	RHPN1 (ENSPPRG00000014507)	ENSPPRG00000015929
Tiger	MODERN SPECIES	358	ENSPTIG00000007635	ENSPTIG00000009972	ENSPTIG00000011322	ENSPTIG00000012032	ENSPTIG00000012564	MAF1 (ENSPTIG00000015146) #8	SHARPIN (ENSPTIG00000016864) #9	CYC1 (ENSPTIG00000017885) #10	GPAA1 (ENSPTIG00000018654) #11	EXOSC4 (ENSPTIG00000020006) #12	SPATC1 (ENSPTIG00000020852) #15	GRINA (ENSPTIG00000000243) #17	ENSPTIG00000006447	ENSPTIG00000007265 #20	PUF60 (ENSPTIG00000009795) #21	ENSPTIG00000014644 #22	ENSPTIG00000021194 #24	ENSPTIG00000001201	ZNF623 (ENSPTIG00000007289) #27	GFUS (ENSPTIG00000006785) #29	PYCR3 (ENSPTIG00000009262) #30	ENSPTIG00000010781 #32	NAPRT (ENSPTIG00000013460) #33	ZC3H3 (ENSPTIG00000016438) #36	ENSPTIG00000017525	ENSPTIG00000018176	ENSPTIG00000019116	GPIHBP1 (ENSPTIG00000020632)	LY6H (ENSPTIG00000021111)	ENSPTIG00000007419
Cat	MODERN SPECIES	249	MROH1 (ENSFCAG00000007721)	TSSK5 (ENSFCAG00000050792)	HGH1 (ENSFCAG00000028500)	MAF1 (ENSFCAG00000011549) #8	SHARPIN (ENSFCAG00000011548) #9	CYC1 (ENSFCAG00000011545) #10	GPAA1 (ENSFCAG00000021978) #11	EXOSC4 (ENSFCAG00000034465) #12	OPLAH (ENSFCAG00000011543) #13	SMPD5 (ENSFCAG00000052060) #14	SPATC1 (ENSFCAG00000011539) #15	GRINA (ENSFCAG00000026876) #17	PLEC (ENSFCAG00000042897) #19	ENSFCAG00000040788	PUF60 (ENSFCAG00000001045) #21	SCRIB (ENSFCAG00000001044) #22	FAM83H (ENSFCAG00000025159) #23	MAPK15 (ENSFCAG00000046313) #24	ENSFCAG00000042746 #25	ZNF623 (ENSFCAG00000041239) #27	GFUS (ENSFCAG00000001041) #29	PYCR3 (ENSFCAG00000001040) #30	TIGD5 (ENSFCAG00000001039) #35	EEF1D (ENSFCAG00000027237) #32	NAPRT (ENSFCAG00000001037) #33	MROH6 (ENSFCAG00000027723) #34	GSDMD (ENSFCAG00000013242)	ENSFCAG00000052780	ZC3H3 (ENSFCAG00000013238) #36	MAFA (ENSFCAG00000042412) #37	ENSFCAG00000050951
Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Cetacea	ANCESTRAL SPECIES	17	ENSGT00940000163397	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00940000163397	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00940000163397	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00390000016546	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00390000016546	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a	ENSGT00940000162943
Narwhal	MODERN SPECIES	312	ENSMMNG00015016007	HGH1 (ENSMMNG00015016065)	WDR97 (ENSMMNG00015016139) #7	MAF1 (ENSMMNG00015016302) #8	SHARPIN (ENSMMNG00015016347) #9	CYC1 (ENSMMNG00015016389) #10	GPAA1 (ENSMMNG00015016454) #11	EXOSC4 (ENSMMNG00015016563) #12	OPLAH (ENSMMNG00015016609) #13	SPATC1 (ENSMMNG00015016664) #15	GRINA (ENSMMNG00015016735) #17	PARP10 (ENSMMNG00015016783) #18	PLEC (ENSMMNG00015017179) #19	NRBP2 (ENSMMNG00015017941) #20	PUF60 (ENSMMNG00015018029) #21	SCRIB (ENSMMNG00015018262) #22	FAM83H (ENSMMNG00015018421) #23	ENSMMNG00015018542	ENSMMNG00015018573 #25	ZNF623 (ENSMMNG00015018590) #27	GFUS (ENSMMNG00015018603) #29	PYCR3 (ENSMMNG00015018632) #30	ENSMMNG00015018670 #32	NAPRT (ENSMMNG00015018776) #33	GSDMD (ENSMMNG00015018910)	ZC3H3 (ENSMMNG00015018947) #36	MAFA (ENSMMNG00015018973) #37	RHPN1 (ENSMMNG00015019036)	TOP1MT (ENSMMNG00015019307)	ZNF696 (ENSMMNG00015019335) ##28	GLI4 (ENSMMNG00015019354)
Beluga whale	MODERN SPECIES	57	ENSDLEG00000018166	WDR97 (ENSDLEG00000018116) #7	MAF1 (ENSDLEG00000018065) #8	SHARPIN (ENSDLEG00000018047) #9	CYC1 (ENSDLEG00000018028) #10	GPAA1 (ENSDLEG00000017992) #11	EXOSC4 (ENSDLEG00000017983) #12	OPLAH (ENSDLEG00000017891) #13	ENSDLEG00000017878 #16	SPATC1 (ENSDLEG00000017845) #15	GRINA (ENSDLEG00000017826) #17	PARP10 (ENSDLEG00000017804) #18	PLEC (ENSDLEG00000017581) #19	NRBP2 (ENSDLEG00000017355) #20	PUF60 (ENSDLEG00000017072) #21	SCRIB (ENSDLEG00000016937) #22	FAM83H (ENSDLEG00000016906) #23	MAPK15 (ENSDLEG00000016899) #24	ENSDLEG00000016882	ENSDLEG00000016874 #25	ZNF623 (ENSDLEG00000016864) #27	TSTA3 (ENSDLEG00000016824) #29	PYCR3 (ENSDLEG00000016779) #30	ENSDLEG00000016758 #32	NAPRT (ENSDLEG00000016747) #33	MROH6 (ENSDLEG00000016708) #34	GSDMD (ENSDLEG00000016690)	ZC3H3 (ENSDLEG00000016668) #36	MAFA (ENSDLEG00000016663) #37	RHPN1 (ENSDLEG00000016611)	ENSDLEG00000016547
Vaquita	MODERN SPECIES	8	ENSPSNG00000021383	WDR97 (ENSPSNG00000021212) #7	MAF1 (ENSPSNG00000021174) #8	SHARPIN (ENSPSNG00000021151) #9	CYC1 (ENSPSNG00000021132) #10	GPAA1 (ENSPSNG00000021059) #11	EXOSC4 (ENSPSNG00000021001) #12	OPLAH (ENSPSNG00000020924) #13	SPATC1 (ENSPSNG00000020830) #15	ENSPSNG00000020800	GRINA (ENSPSNG00000020762) #17	PARP10 (ENSPSNG00000020690) #18	PLEC (ENSPSNG00000020200) #19	ENSPSNG00000020098 #20	PUF60 (ENSPSNG00000019982) #21	SCRIB (ENSPSNG00000019007) #22	FAM83H (ENSPSNG00000018798) #23	MAPK15 (ENSPSNG00000018505) #24	ENSPSNG00000018485 #25	ZNF623 (ENSPSNG00000018461) #27	GFUS (ENSPSNG00000018379) #29	PYCR3 (ENSPSNG00000018311) #30	TIGD5 (ENSPSNG00000018290) #35	ENSPSNG00000018101 #32	NAPRT (ENSPSNG00000018029) #33	GSDMD (ENSPSNG00000017996)	ZC3H3 (ENSPSNG00000017962) #36	MAFA (ENSPSNG00000017944) #37	RHPN1 (ENSPSNG00000017253)	TOP1MT (ENSPSNG00000017042)	ZNF696 (ENSPSNG00000017016) ##28
Dolphin	MODERN SPECIES	2214														ENSTTRG00000017089 #20	PUF60 (ENSTTRG00000017088) #21	SCRIB (ENSTTRG00000017087) #22
Sperm whale	MODERN SPECIES	6	ENSPCTG00005014680	LY6E (ENSPCTG00005014593)	LY6H (ENSPCTG00005014505)	ZFP41 (ENSPCTG00005014395)	GLI4 (ENSPCTG00005014326)	ZNF696 (ENSPCTG00005014299) ##28	TOP1MT (ENSPCTG00005014111)	ZC3H3 (ENSPCTG00005014077) #36	GSDMD (ENSPCTG00005014025)	NAPRT (ENSPCTG00005013607) #33	EEF1D (ENSPCTG00005013195) #32	TIGD5 (ENSPCTG00005013135) #35	ENSPCTG00005013092 #30	PLEC (ENSPCTG00005012403) #19	PUF60 (ENSPCTG00005012237) #21	SCRIB (ENSPCTG00005012070) #22	FAM83H (ENSPCTG00005011914) #23	ENSPCTG00005011594 #25	ENSPCTG00005011515 #13	SPATC1 (ENSPCTG00005011377) #15	ENSPCTG00005011335 #16	CYC1 (ENSPCTG00005011306) #10	SHARPIN (ENSPCTG00005011225) #9	MAF1 (ENSPCTG00005011182) #8	WDR97 (ENSPCTG00005010888) #7	HGH1 (ENSPCTG00005010845)	ENSPCTG00005010745	MROH1 (ENSPCTG00005010392)	SCX (ENSPCTG00005010204)	HSF1 (ENSPCTG00005009704)	DGAT1 (ENSPCTG00005009560)
Blue whale	MODERN SPECIES	8	WDR97 (ENSBMSG00010017084) #7	MAF1 (ENSBMSG00010017188) #8	SHARPIN (ENSBMSG00010017203) #9	CYC1 (ENSBMSG00010017227) #10	GPAA1 (ENSBMSG00010017266) #11	EXOSC4 (ENSBMSG00010017347) #12	OPLAH (ENSBMSG00010017382) #13	SPATC1 (ENSBMSG00010017410) #15	ENSBMSG00010017453 #16	ENSBMSG00010017467	GRINA (ENSBMSG00010017488) #17	PARP10 (ENSBMSG00010017529) #18	PLEC (ENSBMSG00010018023) #19	NRBP2 (ENSBMSG00010018834) #20	PUF60 (ENSBMSG00010019365) #21	SCRIB (ENSBMSG00010019548) #22	FAM83H (ENSBMSG00010020169) #23	MAPK15 (ENSBMSG00010020204) #24	ENSBMSG00010020253 #25	ENSBMSG00010020269	ZNF623 (ENSBMSG00010020285) #27	ENSBMSG00010020292 #28	ENSBMSG00010020314 #29	PYCR3 (ENSBMSG00010020364) #30	TIGD5 (ENSBMSG00010020386) #35	ENSBMSG00010020423 #32	NAPRT (ENSBMSG00010020480) #33	MROH6 (ENSBMSG00010020556) #34	GSDMD (ENSBMSG00010020619)	ZC3H3 (ENSBMSG00010013109) #36	MAFA (ENSBMSG00010013122) #37
Pecora	ANCESTRAL SPECIES	20	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Percora_a	ANCESTRAL SPECIES	23	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Bovidae	ANCESTRAL SPECIES	22	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Caprinae	ANCESTRAL SPECIES	18	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37	ENSGT00940000153837.a.a
Goat	MODERN SPECIES	102														NRBP2 (ENSCHIG00000000429) #20	PUF60 (ENSCHIG00000001618) #21	SCRIB (ENSCHIG00000019209) #22	IQANK1 (ENSCHIG00000000123)	FAM83H (ENSCHIG00000000189) #23
Rambouillet Sheep	MODERN SPECIES	25	SCX (ENSOARG00020005013)	ENSOARG00020005174	HGH1 (ENSOARG00020005203)	MAF1 (ENSOARG00020005332) #8	CYC1 (ENSOARG00020005398) #10	GPAA1 (ENSOARG00020005441) #11	EXOSC4 (ENSOARG00020005540) #12	ENSOARG00020005869 #14	SPATC1 (ENSOARG00020005912) #15	GRINA (ENSOARG00020006124) #17	PARP10 (ENSOARG00020006150) #18	PLEC (ENSOARG00020006299) #19	EPPK1 (ENSOARG00020008171)	NRBP2 (ENSOARG00020008343) #20	PUF60 (ENSOARG00020009796) #21	SCRIB (ENSOARG00020010125) #22	FAM83H (ENSOARG00020011357) #23	MAPK15 (ENSOARG00020011493) #24	ENSOARG00020011643 #25	ZNF623 (ENSOARG00020011670) #27	GFUS (ENSOARG00020011707) #29	ENSOARG00020011809 #30	TIGD5 (ENSOARG00020011847) #35	EEF1D (ENSOARG00020011880) #32	NAPRT (ENSOARG00020012136) #33	GSDMD (ENSOARG00020012485)	MAFA (ENSOARG00020012656) #37	ZNF696 (ENSOARG00020012704) ##28	GLI4 (ENSOARG00020012749)	GPIHBP1 (ENSOARG00020012887)	LY6H (ENSOARG00020012951)
Bovinae	ANCESTRAL SPECIES	18	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Bos	ANCESTRAL SPECIES	21	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Bos_b	ANCESTRAL SPECIES	43	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Hybrid Bos Indicus	MODERN SPECIES	5	MAF1 (ENSBIXG00005009497) #8	CYC1 (ENSBIXG00005009457) #10	GPAA1 (ENSBIXG00005009420) #11	EXOSC4 (ENSBIXG00005009444) #12	OPLAH (ENSBIXG00005009381) #13	ENSBIXG00005009349 #14	SPATC1 (ENSBIXG00005009325) #15	GRINA (ENSBIXG00005009316) #17	PARP10 (ENSBIXG00005000469) #18	PLEC (ENSBIXG00005006765) #19	ENSBIXG00005029794	ENSBIXG00005029811	ENSBIXG00005029820 #20	ENSBIXG00005029835 #20	PUF60 (ENSBIXG00005029853) #21	SCRIB (ENSBIXG00005029884) #22	FAM83H (ENSBIXG00005029924) #23	ENSBIXG00005029936 #24	ENSBIXG00005029950 #25	ZNF623 (ENSBIXG00005029955) #27	ENSBIXG00005029964 #28	GFUS (ENSBIXG00005029985) #29	PYCR3 (ENSBIXG00005030011) #30	TIGD5 (ENSBIXG00005030024) #35	ENSBIXG00005030062 #32	NAPRT (ENSBIXG00005030133) #33	MROH6 (ENSBIXG00005030160) #34	GSDMD (ENSBIXG00005030192)	ZC3H3 (ENSBIXG00005030225) #36	MAFA (ENSBIXG00005030239) #37	RHPN1 (ENSBIXG00005030249)
Cow	MODERN SPECIES	5	MAF1 (ENSBTAG00000012242) #8	ENSBTAG00000051469	SHARPIN (ENSBTAG00000012235) #9	CYC1 (ENSBTAG00000012232) #10	GPAA1 (ENSBTAG00000014610) #11	EXOSC4 (ENSBTAG00000014607) #12	OPLAH (ENSBTAG00000017281) #13	SMPD5 (ENSBTAG00000015040) #14	SPATC1 (ENSBTAG00000026350) #15	GRINA (ENSBTAG00000000312) #17	PARP10 (ENSBTAG00000009677) #18	PLEC (ENSBTAG00000011922) #19	EPPK1 (ENSBTAG00000045727)	NRBP2 (ENSBTAG00000008079) #20	PUF60 (ENSBTAG00000037493) #21	SCRIB (ENSBTAG00000008421) #22	IQANK1 (ENSBTAG00000048486)	FAM83H (ENSBTAG00000038682) #23	MAPK15 (ENSBTAG00000019864) #24	CCDC166 (ENSBTAG00000040360) #25	ZNF623 (ENSBTAG00000045791) #27	ENSBTAG00000052472 #28	GFUS (ENSBTAG00000034691) #29	PYCR3 (ENSBTAG00000016810) #30	TIGD5 (ENSBTAG00000048160) #35	EEF1D (ENSBTAG00000014643) #32	NAPRT (ENSBTAG00000014642) #33	MROH6 (ENSBTAG00000034613) #34	GSDMD (ENSBTAG00000021474)	ZC3H3 (ENSBTAG00000021472) #36	MAFA (ENSBTAG00000026344) #37
Bos_a	ANCESTRAL SPECIES	43	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Wild yak	MODERN SPECIES	168															PUF60 (ENSBMUG00000012511) #21	SCRIB (ENSBMUG00000013981) #22	IQANK1 (ENSBMUG00000015402)	FAM83H (ENSBMUG00000015418) #23	MAPK15 (ENSBMUG00000015448) #24	ENSBMUG00000015473 #25	ZNF623 (ENSBMUG00000015485) #27	ENSBMUG00000015500 #28	GFUS (ENSBMUG00000015516) #29	ENSBMUG00000015526 #30	EEF1D (ENSBMUG00000015575) #32	NAPRT (ENSBMUG00000015595) #33	GSDMD (ENSBMUG00000015651)	ZC3H3 (ENSBMUG00000015678) #36	RHPN1 (ENSBMUG00000015761)	ZNF696 (ENSBMUG00000015806) ##28	ENSBMUG00000015811
American bison	MODERN SPECIES	1810														ENSBBBG00000005706 #20	PUF60 (ENSBBBG00000021382) #21	SCRIB (ENSBBBG00000021320) #22
Siberian musk deer	MODERN SPECIES	1204	ENSMMSG00000020533	HGH1 (ENSMMSG00000020514)	ENSMMSG00000020503	ENSMMSG00000020461	ENSMMSG00000020394 #8	CYC1 (ENSMMSG00000020321) #10	GPAA1 (ENSMMSG00000020143) #11	EXOSC4 (ENSMMSG00000020111) #12	OPLAH (ENSMMSG00000020069) #13	ENSMMSG00000020029 #14	SPATC1 (ENSMMSG00000019996) #15	GRINA (ENSMMSG00000019971) #17	PARP10 (ENSMMSG00000019945) #18	NRBP2 (ENSMMSG00000019766) #20	PUF60 (ENSMMSG00000019612) #21	SCRIB (ENSMMSG00000019258) #22	FAM83H (ENSMMSG00000019157) #23	MAPK15 (ENSMMSG00000019099) #24	ENSMMSG00000019073 #25	ZNF623 (ENSMMSG00000019059) #27	GFUS (ENSMMSG00000019014) #29	PYCR3 (ENSMMSG00000018935) #30	TIGD5 (ENSMMSG00000018919) #35	ENSMMSG00000018709 #32	NAPRT (ENSMMSG00000018644) #33	MROH6 (ENSMMSG00000018575) #34	GSDMD (ENSMMSG00000018522)	ZC3H3 (ENSMMSG00000018484) #36	MAFA (ENSMMSG00000018472) #37	RHPN1 (ENSMMSG00000018400)	ENSMMSG00000018346
Yarkand deer	MODERN SPECIES	13	ENSCHYG00000011366	ENSCHYG00000011382	MAF1 (ENSCHYG00000011404) #8	SHARPIN (ENSCHYG00000011481) #9	CYC1 (ENSCHYG00000011558) #10	GPAA1 (ENSCHYG00000011618) #11	EXOSC4 (ENSCHYG00000011793) #12	OPLAH (ENSCHYG00000011883) #13	ENSCHYG00000012122 #14	SPATC1 (ENSCHYG00000012225) #15	GRINA (ENSCHYG00000012311) #17	PARP10 (ENSCHYG00000012379) #18	PLEC (ENSCHYG00000012577) #19	NRBP2 (ENSCHYG00000013638) #20	PUF60 (ENSCHYG00000014014) #21	SCRIB (ENSCHYG00000015104) #22	IQANK1 (ENSCHYG00000015525)	FAM83H (ENSCHYG00000015696) #23	MAPK15 (ENSCHYG00000015791) #24	CCDC166 (ENSCHYG00000015968) #25	ZNF623 (ENSCHYG00000016014) #27	ENSCHYG00000016074 #28	GFUS (ENSCHYG00000016178) #29	PYCR3 (ENSCHYG00000016325) #30	TIGD5 (ENSCHYG00000016566) #35	ENSCHYG00000016622 #32	NAPRT (ENSCHYG00000016943) #33	MROH6 (ENSCHYG00000017175) #34	GSDMD (ENSCHYG00000017506)	ZC3H3 (ENSCHYG00000017811) #36	MAFA (ENSCHYG00000017958) #37
Camelidae	ANCESTRAL SPECIES	19	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01000000219817	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00940000163493.g.a #28	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Arabian camel	MODERN SPECIES	17	ENSCDRG00005014945	MAF1 (ENSCDRG00005014881) #8	SHARPIN (ENSCDRG00005014774) #9	CYC1 (ENSCDRG00005014717) #10	GPAA1 (ENSCDRG00005014443) #11	EXOSC4 (ENSCDRG00005014382) #12	OPLAH (ENSCDRG00005014138) #13	ENSCDRG00005014116 #14	SPATC1 (ENSCDRG00005014086) #15	GRINA (ENSCDRG00005013994) #17	PARP10 (ENSCDRG00005013929) #18	PLEC (ENSCDRG00005010034) #19	ENSCDRG00005009748	NRBP2 (ENSCDRG00005009250) #20	PUF60 (ENSCDRG00005007981) #21	SCRIB (ENSCDRG00005007090) #22	FAM83H (ENSCDRG00005007046) #23	ENSCDRG00005007032	ENSCDRG00005006989 #24	ENSCDRG00005006949	ENSCDRG00005006897 #25	ZNF623 (ENSCDRG00005006881) #27	ENSCDRG00005015450 #28	GFUS (ENSCDRG00005015411) #29	PYCR3 (ENSCDRG00005015342) #30	TIGD5 (ENSCDRG00005015329) #35	ENSCDRG00005015307	EEF1D (ENSCDRG00005015097) #32	NAPRT (ENSCDRG00005014757) #33	MROH6 (ENSCDRG00005014601) #34	GSDMD (ENSCDRG00005014546)
Suina	ANCESTRAL SPECIES	49	ENSGT00940000163397	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01090000261964 #31	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Chacoan peccary	MODERN SPECIES	930														NRBP2 (ENSCWAG00000009761) #20	PUF60 (ENSCWAG00000009070) #21	SCRIB (ENSCWAG00000008827) #22	FAM83H (ENSCWAG00000008549) #23	ZNF623 (ENSCWAG00000008437) #27	GFUS (ENSCWAG00000008386) #29	ENSCWAG00000008347 #30	TIGD5 (ENSCWAG00000008332) #35	ENSCWAG00000008289 #31	ENSCWAG00000008255 #32	NAPRT (ENSCWAG00000007835) #33
Pig	MODERN SPECIES	12	ENSSSCG00000005916	ENSSSCG00000034462	MAF1 (ENSSSCG00000005915) #8	SHARPIN (ENSSSCG00000005914) #9	CYC1 (ENSSSCG00000031918) #10	GPAA1 (ENSSSCG00000005912) #11	EXOSC4 (ENSSSCG00000005925) #12	OPLAH (ENSSSCG00000005911) #13	ENSSSCG00000005922 #14	SPATC1 (ENSSSCG00000005923) #15	GRINA (ENSSSCG00000032796) #17	PLEC (ENSSSCG00000039094) #19	ENSSSCG00000062085	NRBP2 (ENSSSCG00000038025) #20	PUF60 (ENSSSCG00000038800) #21	SCRIB (ENSSSCG00000039466) #22	IQANK1 (ENSSSCG00000034987)	FAM83H (ENSSSCG00000036964) #23	MAPK15 (ENSSSCG00000035933) #24	ENSSSCG00000037038 #25	ZNF623 (ENSSSCG00000039679) #27	GFUS (ENSSSCG00000031698) #29	PYCR3 (ENSSSCG00000032763) #30	TIGD5 (ENSSSCG00000040119) #35	EEF1D (ENSSSCG00000006954) #32	NAPRT (ENSSSCG00000055397) #33	MROH6 (ENSSSCG00000006948) #34	GSDMD (ENSSSCG00000006955)	ZC3H3 (ENSSSCG00000006956) #36	MAFA (ENSSSCG00000034820) #37	RHPN1 (ENSSSCG00000006957)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154025.a #22
Hedgehog	MODERN SPECIES	7349																SCRIB (ENSEEUG00000011896) #22
Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Primates	ANCESTRAL SPECIES	20	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000012147	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Hominidae	ANCESTRAL SPECIES	15	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000161627.a.a.a.a.a.b.b.a.b	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000012147	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000161627.a.a.a.a.a.b.b.a.b	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000012147	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000012147	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Pan	ANCESTRAL SPECIES	11	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000012147	ENSGT00940000164666	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000174554	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	21	HGH1 (ENSPTRG00000020683)	ENSPTRG00000047143	WDR97 (ENSPTRG00000020682)	MAF1 (ENSPTRG00000020681) #8	SHARPIN (ENSPTRG00000020680) #9	CYC1 (ENSPTRG00000020679) #10	GPAA1 (ENSPTRG00000020678) #11	EXOSC4 (ENSPTRG00000020677) #12	OPLAH (ENSPTRG00000020676) #13	SPATC1 (ENSPTRG00000020675) #15	GRINA (ENSPTRG00000020674) #17	PARP10 (ENSPTRG00000043606) #18	PLEC (ENSPTRG00000020672) #19	NRBP2 (ENSPTRG00000020671) #20	PUF60 (ENSPTRG00000020670) #21	ENSPTRG00000020669 #22	ENSPTRG00000049773	ENSPTRG00000047274	FAM83H (ENSPTRG00000030909) #23	MAPK15 (ENSPTRG00000020666) #24	CCDC166 (ENSPTRG00000049538) #25	ENSPTRG00000020665	ZNF707 (ENSPTRG00000020664)	GFUS (ENSPTRG00000020662) #29	PYCR3 (ENSPTRG00000020661) #30	TIGD5 (ENSPTRG00000030911) #35	ENSPTRG00000050786	EEF1D (ENSPTRG00000020660) #32	NAPRT (ENSPTRG00000020659) #33	ENSPTRG00000049346	GSDMD (ENSPTRG00000020656)
Chimpanzee	MODERN SPECIES	662														ENSPTRG00000050799 #20	ENSPTRG00000043963 #21	ENSPTRG00000043504 #22
Bonobo	MODERN SPECIES	21	ENSPPAG00000040830	ENSPPAG00000023330	ENSPPAG00000037751	SHARPIN (ENSPPAG00000036790) #9	CYC1 (ENSPPAG00000007852) #10	GPAA1 (ENSPPAG00000042463) #11	EXOSC4 (ENSPPAG00000035746) #12	OPLAH (ENSPPAG00000032387) #13	SPATC1 (ENSPPAG00000039791) #15	GRINA (ENSPPAG00000028746) #17	PARP10 (ENSPPAG00000041157) #18	PLEC (ENSPPAG00000042112) #19	ENSPPAG00000038699	NRBP2 (ENSPPAG00000032022) #20	PUF60 (ENSPPAG00000029933) #21	SCRIB (ENSPPAG00000029327) #22	IQANK1 (ENSPPAG00000031397)	FAM83H (ENSPPAG00000042173) #23	MAPK15 (ENSPPAG00000037186) #24	ENSPPAG00000042682 #25	ENSPPAG00000041351	ZNF707 (ENSPPAG00000037301)	GFUS (ENSPPAG00000029780) #29	PYCR3 (ENSPPAG00000028398) #30	TIGD5 (ENSPPAG00000028001) #35	ENSPPAG00000027883	EEF1D (ENSPPAG00000019348) #32	ENSPPAG00000041905	GSDMD (ENSPPAG00000038919)	ZC3H3 (ENSPPAG00000035455) #36	RHPN1 (ENSPPAG00000003585)
Human	MODERN SPECIES	20	HGH1 (ENSG00000235173)	WDR97 (ENSG00000179698) #7	MAF1 (ENSG00000179632) #8	SHARPIN (ENSG00000179526) #9	CYC1 (ENSG00000179091) #10	GPAA1 (ENSG00000197858) #11	EXOSC4 (ENSG00000178896) #12	OPLAH (ENSG00000178814) #13	SPATC1 (ENSG00000186583) #15	GRINA (ENSG00000178719) #17	PARP10 (ENSG00000178685) #18	PLEC (ENSG00000178209) #19	EPPK1 (ENSG00000261150)	NRBP2 (ENSG00000185189) #20	PUF60 (ENSG00000179950) #21	SCRIB (ENSG00000180900) #22	IQANK1 (ENSG00000203499)	FAM83H (ENSG00000180921) #23	MAPK15 (ENSG00000181085) #24	CCDC166 (ENSG00000255181) #25	ZNF707 (ENSG00000181135)	ZNF623 (ENSG00000183309) #27	GFUS (ENSG00000104522) #29	PYCR3 (ENSG00000104524) #30	TIGD5 (ENSG00000179886) #35	EEF1D (ENSG00000104529) #32	NAPRT (ENSG00000147813) #33	MROH6 (ENSG00000204839) #34	GSDMD (ENSG00000104518)	ZC3H3 (ENSG00000014164) #36	MAFA (ENSG00000182759) #37
Gorilla	MODERN SPECIES	21	MROH1 (ENSGGOG00000013579)	HGH1 (ENSGGOG00000002379)	WDR97 (ENSGGOG00000002376) #7	SHARPIN (ENSGGOG00000027471) #9	CYC1 (ENSGGOG00000010506) #10	GPAA1 (ENSGGOG00000010491) #11	ENSGGOG00000044212 #12	ENSGGOG00000040193 #12	OPLAH (ENSGGOG00000015998) #13	ENSGGOG00000015988 #15	GRINA (ENSGGOG00000001254) #17	PARP10 (ENSGGOG00000001802) #18	PLEC (ENSGGOG00000012217) #19	NRBP2 (ENSGGOG00000004652) #20	PUF60 (ENSGGOG00000004646) #21	SCRIB (ENSGGOG00000004635) #22	ENSGGOG00000036169	FAM83H (ENSGGOG00000007910) #23	ENSGGOG00000040538	MAPK15 (ENSGGOG00000007904) #24	CCDC166 (ENSGGOG00000023615) #25	ENSGGOG00000012826	ZNF707 (ENSGGOG00000012835)	ZNF623 (ENSGGOG00000005440) #27	GFUS (ENSGGOG00000002394) #29	PYCR3 (ENSGGOG00000002393) #30	TIGD5 (ENSGGOG00000002392) #35	EEF1D (ENSGGOG00000002389) #32	MROH6 (ENSGGOG00000025090) #34	GSDMD (ENSGGOG00000006736)	ZC3H3 (ENSGGOG00000002833) #36
Gibbon	MODERN SPECIES	6	ENSNLEG00000010546	ENSNLEG00000028400	ENSNLEG00000010522	ENSNLEG00000030366	WDR97 (ENSNLEG00000010497) #7	SHARPIN (ENSNLEG00000010468) #9	CYC1 (ENSNLEG00000010457) #10	ENSNLEG00000010455 #11	EXOSC4 (ENSNLEG00000010449) #12	SPATC1 (ENSNLEG00000010445) #15	ENSNLEG00000002439 #17	PARP10 (ENSNLEG00000002423) #18	PLEC (ENSNLEG00000031418) #19	NRBP2 (ENSNLEG00000002327) #20	PUF60 (ENSNLEG00000002156) #21	SCRIB (ENSNLEG00000002144) #22	ENSNLEG00000031433	ENSNLEG00000002142 #23	ENSNLEG00000002132 #24	CCDC166 (ENSNLEG00000002128) #25	ENSNLEG00000002119	ZNF707 (ENSNLEG00000002107)	ZNF623 (ENSNLEG00000018234) #27	GFUS (ENSNLEG00000002031) #29	PYCR3 (ENSNLEG00000001984) #30	ENSNLEG00000001832 #32	NAPRT (ENSNLEG00000001703) #33	ENSNLEG00000001683	ZC3H3 (ENSNLEG00000001681) #36	ENSNLEG00000001669	TOP1MT (ENSNLEG00000001489)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Macaca	ANCESTRAL SPECIES	14	ENSGT00960000189738	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685.l #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00960000189738	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685.l #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000167847	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT01090000260213.a.a.a.b.b.a	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Rhesus	MODERN SPECIES	18	BOP1 (ENSMMUG00000014724)	MROH1 (ENSMMUG00000014716)	HGH1 (ENSMMUG00000014717)	ENSMMUG00000062487	ENSMMUG00000007157	MAF1 (ENSMMUG00000007155) #8	CYC1 (ENSMMUG00000007149) #10	SHARPIN (ENSMMUG00000007152) #9	GPAA1 (ENSMMUG00000007161) #11	EXOSC4 (ENSMMUG00000050137) #12	GRINA (ENSMMUG00000056458) #17	ENSMMUG00000059569 #18	PLEC (ENSMMUG00000000388) #19	NRBP2 (ENSMMUG00000028891) #20	PUF60 (ENSMMUG00000013558) #21	SCRIB (ENSMMUG00000013552) #22	ENSMMUG00000057609	MAPK15 (ENSMMUG00000001187) #24	ENSMMUG00000053415	CCDC166 (ENSMMUG00000061738) #25	FAM83H (ENSMMUG00000014257) #23	ZNF707 (ENSMMUG00000058943)	ZNF623 (ENSMMUG00000016714) #27	ENSMMUG00000051967	GFUS (ENSMMUG00000014664) #29	TIGD5 (ENSMMUG00000014668) #35	EEF1D (ENSMMUG00000001645) #32	NAPRT (ENSMMUG00000001641) #33	MROH6 (ENSMMUG00000001639) #34	GSDMD (ENSMMUG00000001633)	ZC3H3 (ENSMMUG00000058733) #36
Pig-tailed macaque	MODERN SPECIES	146	HGH1 (ENSMNEG00000042923)	ENSMNEG00000010399	WDR97 (ENSMNEG00000045232) #7	MAF1 (ENSMNEG00000033208) #8	SHARPIN (ENSMNEG00000003728) #9	CYC1 (ENSMNEG00000038151) #10	GPAA1 (ENSMNEG00000038752) #11	EXOSC4 (ENSMNEG00000033938) #12	OPLAH (ENSMNEG00000036204) #13	SPATC1 (ENSMNEG00000010048) #15	GRINA (ENSMNEG00000029129) #17	PARP10 (ENSMNEG00000034827) #18	PLEC (ENSMNEG00000011406) #19	NRBP2 (ENSMNEG00000036816) #20	PUF60 (ENSMNEG00000031099) #21	SCRIB (ENSMNEG00000029248) #22	IQANK1 (ENSMNEG00000031063)	FAM83H (ENSMNEG00000043239) #23	MAPK15 (ENSMNEG00000033741) #24	CCDC166 (ENSMNEG00000029532) #25	ZNF707 (ENSMNEG00000045326)	GFUS (ENSMNEG00000036917) #29	PYCR3 (ENSMNEG00000003395) #30	TIGD5 (ENSMNEG00000016713) #35	ENSMNEG00000031579	EEF1D (ENSMNEG00000042392) #32	NAPRT (ENSMNEG00000031643) #33	MROH6 (ENSMNEG00000038193) #34	GSDMD (ENSMNEG00000031344)	ZC3H3 (ENSMNEG00000029433) #36	MAFA (ENSMNEG00000033580) #37
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000016546	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Cercopithecinae_d	ANCESTRAL SPECIES	72	ENSGT00390000016546	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Drill	MODERN SPECIES	535	ENSMLEG00000039432	ENSMLEG00000005098	WDR97 (ENSMLEG00000040562) #7	MAF1 (ENSMLEG00000043235) #8	SHARPIN (ENSMLEG00000016210) #9	CYC1 (ENSMLEG00000040485) #10	GPAA1 (ENSMLEG00000040321) #11	EXOSC4 (ENSMLEG00000041197) #12	OPLAH (ENSMLEG00000040346) #13	SPATC1 (ENSMLEG00000040406) #15	GRINA (ENSMLEG00000043230) #17	PARP10 (ENSMLEG00000024662) #18	PLEC (ENSMLEG00000033296) #19	NRBP2 (ENSMLEG00000033351) #20	PUF60 (ENSMLEG00000040009) #21	SCRIB (ENSMLEG00000043290) #22	ENSMLEG00000035902	MAPK15 (ENSMLEG00000039072) #24	ZNF707 (ENSMLEG00000025734)	GFUS (ENSMLEG00000042551) #29	PYCR3 (ENSMLEG00000009279) #30	EEF1D (ENSMLEG00000042065) #32	NAPRT (ENSMLEG00000039829) #33	MROH6 (ENSMLEG00000033299) #34	GSDMD (ENSMLEG00000027929)	ZC3H3 (ENSMLEG00000038139) #36	RHPN1 (ENSMLEG00000003248)	TOP1MT (ENSMLEG00000037543)	ENSMLEG00000039180	GLI4 (ENSMLEG00000030642)	GPIHBP1 (ENSMLEG00000008328)
Sooty mangabey	MODERN SPECIES	586	HGH1 (ENSCATG00000040683)	ENSCATG00000020579	WDR97 (ENSCATG00000009710) #7	MAF1 (ENSCATG00000032499) #8	SHARPIN (ENSCATG00000036395) #9	CYC1 (ENSCATG00000042825) #10	GPAA1 (ENSCATG00000036820) #11	EXOSC4 (ENSCATG00000029965) #12	OPLAH (ENSCATG00000042601) #13	SPATC1 (ENSCATG00000035288) #15	GRINA (ENSCATG00000012069) #17	PARP10 (ENSCATG00000025822) #18	PLEC (ENSCATG00000009349) #19	NRBP2 (ENSCATG00000044935) #20	PUF60 (ENSCATG00000035405) #21	SCRIB (ENSCATG00000033327) #22	IQANK1 (ENSCATG00000030464)	FAM83H (ENSCATG00000033419) #23	MAPK15 (ENSCATG00000041893) #24	CCDC166 (ENSCATG00000032293) #25	ZNF707 (ENSCATG00000010870)	GFUS (ENSCATG00000031930) #29	PYCR3 (ENSCATG00000031176) #30	TIGD5 (ENSCATG00000021269) #35	ENSCATG00000016345	EEF1D (ENSCATG00000028384) #32	NAPRT (ENSCATG00000031974) #33	MROH6 (ENSCATG00000024483) #34	GSDMD (ENSCATG00000039575)	ZC3H3 (ENSCATG00000020900) #36	MAFA (ENSCATG00000018551) #37
Olive baboon	MODERN SPECIES	18	BOP1 (ENSPANG00000024950)	HGH1 (ENSPANG00000048724)	WDR97 (ENSPANG00000023189) #7	MAF1 (ENSPANG00000023186) #8	SHARPIN (ENSPANG00000032690) #9	CYC1 (ENSPANG00000051253) #10	GPAA1 (ENSPANG00000023280) #11	EXOSC4 (ENSPANG00000023276) #12	OPLAH (ENSPANG00000023293) #13	SPATC1 (ENSPANG00000023344) #15	GRINA (ENSPANG00000040620) #17	PARP10 (ENSPANG00000023348) #18	PLEC (ENSPANG00000023403) #19	NRBP2 (ENSPANG00000013123) #20	PUF60 (ENSPANG00000021936) #21	SCRIB (ENSPANG00000006009) #22	FAM83H (ENSPANG00000007686) #23	MAPK15 (ENSPANG00000000540) #24	CCDC166 (ENSPANG00000005939) #25	ZNF707 (ENSPANG00000034925)	ZNF623 (ENSPANG00000006279) #27	GFUS (ENSPANG00000013295) #29	PYCR3 (ENSPANG00000001050) #30	EEF1D (ENSPANG00000012667) #32	NAPRT (ENSPANG00000017234) #33	MROH6 (ENSPANG00000013124) #34	GSDMD (ENSPANG00000005577)	ZC3H3 (ENSPANG00000016578) #36	MAFA (ENSPANG00000005175) #37	RHPN1 (ENSPANG00000015006)	TOP1MT (ENSPANG00000009180)
Vervet Monkey	MODERN SPECIES	27	HGH1 (ENSCSAG00000008696)	WDR97 (ENSCSAG00000008737) #7	MAF1 (ENSCSAG00000008755) #8	SHARPIN (ENSCSAG00000008778) #9	CYC1 (ENSCSAG00000008758) #10	GPAA1 (ENSCSAG00000008794) #11	EXOSC4 (ENSCSAG00000008802) #12	OPLAH (ENSCSAG00000008816) #13	SPATC1 (ENSCSAG00000008830) #15	GRINA (ENSCSAG00000008836) #17	PARP10 (ENSCSAG00000008843) #18	PLEC (ENSCSAG00000008854) #19	ENSCSAG00000008863	NRBP2 (ENSCSAG00000008873) #20	PUF60 (ENSCSAG00000008878) #21	SCRIB (ENSCSAG00000008888) #22	ENSCSAG00000008902	FAM83H (ENSCSAG00000008913) #23	MAPK15 (ENSCSAG00000008923) #24	CCDC166 (ENSCSAG00000008927) #25	ZNF707 (ENSCSAG00000008938)	GFUS (ENSCSAG00000008958) #29	PYCR3 (ENSCSAG00000008980) #30	TIGD5 (ENSCSAG00000018635) #35	EEF1D (ENSCSAG00000008996) #32	NAPRT (ENSCSAG00000009016) #33	MROH6 (ENSCSAG00000009047) #34	GSDMD (ENSCSAG00000009063)	ZC3H3 (ENSCSAG00000009074) #36	MAFA (ENSCSAG00000018634) #37	RHPN1 (ENSCSAG00000009091)
Rhinopithecus	ANCESTRAL SPECIES	20	ENSGT00940000163397	ENSGT00860000135895	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00910000147266	ENSGT00950000183014.f.b.a.a.t.g.b.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000153837.a.a
Black snub-nosed monkey	MODERN SPECIES	726	ENSRBIG00000041463	ENSRBIG00000030691	WDR97 (ENSRBIG00000002514) #7	MAF1 (ENSRBIG00000031465) #8	SHARPIN (ENSRBIG00000041448) #9	CYC1 (ENSRBIG00000042943) #10	GPAA1 (ENSRBIG00000028024) #11	EXOSC4 (ENSRBIG00000038476) #12	OPLAH (ENSRBIG00000037367) #13	SPATC1 (ENSRBIG00000035050) #15	GRINA (ENSRBIG00000043967) #17	PARP10 (ENSRBIG00000040506) #18	PLEC (ENSRBIG00000041068) #19	NRBP2 (ENSRBIG00000029768) #20	PUF60 (ENSRBIG00000035274) #21	SCRIB (ENSRBIG00000044468) #22	IQANK1 (ENSRBIG00000042349)	ENSRBIG00000027983 #23	MAPK15 (ENSRBIG00000033223) #24	CCDC166 (ENSRBIG00000025805) #25	ZNF707 (ENSRBIG00000023183)	GFUS (ENSRBIG00000042855) #29	PYCR3 (ENSRBIG00000042874) #30	TIGD5 (ENSRBIG00000039272) #35	ENSRBIG00000038105	EEF1D (ENSRBIG00000044433) #32	NAPRT (ENSRBIG00000032098) #33	GSDMD (ENSRBIG00000037912)	ZC3H3 (ENSRBIG00000039855) #36	RHPN1 (ENSRBIG00000044452)	TOP1MT (ENSRBIG00000005997)
Golden snub-nosed monkey	MODERN SPECIES	1837	HGH1 (ENSRROG00000030205)	ENSRROG00000029122	ENSRROG00000024776	MAF1 (ENSRROG00000045144) #8	SHARPIN (ENSRROG00000041299) #9	CYC1 (ENSRROG00000043674) #10	GPAA1 (ENSRROG00000038028) #11	EXOSC4 (ENSRROG00000038556) #12	OPLAH (ENSRROG00000037733) #13	SPATC1 (ENSRROG00000007221) #15	GRINA (ENSRROG00000015123) #17	PARP10 (ENSRROG00000039086) #18	PLEC (ENSRROG00000015881) #19	NRBP2 (ENSRROG00000034668) #20	PUF60 (ENSRROG00000029360) #21	SCRIB (ENSRROG00000031187) #22	ENSRROG00000036539
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685.j #11	ENSGT00390000013685.i #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681.c #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t.h #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Cebidae	ANCESTRAL SPECIES	19	ENSGT00940000156930	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896.c #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685.i #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681.c #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t.h #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Cebidae_a	ANCESTRAL SPECIES	58	ENSGT00940000156930	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896.c #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685.i #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164666	ENSGT00940000163183 #27	ENSGT00390000004681.c #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t.g.a.b.b #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Bolivian squirrel monkey	MODERN SPECIES	195	ENSSBOG00000021340	MROH1 (ENSSBOG00000034645)	ENSSBOG00000012882	ENSSBOG00000025669	MAF1 (ENSSBOG00000028419) #8	SHARPIN (ENSSBOG00000022572) #9	CYC1 (ENSSBOG00000026945) #10	GPAA1 (ENSSBOG00000031848) #11	OPLAH (ENSSBOG00000026688) #13	SPATC1 (ENSSBOG00000027237) #15	GRINA (ENSSBOG00000030490) #17	PARP10 (ENSSBOG00000008301) #18	PLEC (ENSSBOG00000025259) #19	NRBP2 (ENSSBOG00000020976) #20	PUF60 (ENSSBOG00000027089) #21	SCRIB (ENSSBOG00000004113) #22	IQANK1 (ENSSBOG00000029170)	FAM83H (ENSSBOG00000024735) #23	MAPK15 (ENSSBOG00000034417) #24	ZNF707 (ENSSBOG00000019215)	ZNF623 (ENSSBOG00000036321) #27	GFUS (ENSSBOG00000028067) #29	PYCR3 (ENSSBOG00000029869) #30	ENSSBOG00000024169 #32	NAPRT (ENSSBOG00000028440) #33	MROH6 (ENSSBOG00000019750) #34	GSDMD (ENSSBOG00000002449)	ZC3H3 (ENSSBOG00000021819) #36	RHPN1 (ENSSBOG00000003916)	ZNF696 (ENSSBOG00000027878) #28	ENSSBOG00000019065
Capuchin	MODERN SPECIES	449	MROH1 (ENSCCAG00000020643)	HGH1 (ENSCCAG00000023544)	ENSCCAG00000031063	MAF1 (ENSCCAG00000026514) #8	SHARPIN (ENSCCAG00000036190) #9	CYC1 (ENSCCAG00000032915) #10	GPAA1 (ENSCCAG00000021525) #11	EXOSC4 (ENSCCAG00000025515) #12	OPLAH (ENSCCAG00000028155) #13	SPATC1 (ENSCCAG00000029692) #15	GRINA (ENSCCAG00000026069) #17	PARP10 (ENSCCAG00000024610) #18	PLEC (ENSCCAG00000031237) #19	NRBP2 (ENSCCAG00000025809) #20	PUF60 (ENSCCAG00000007744) #21	SCRIB (ENSCCAG00000033504) #22	IQANK1 (ENSCCAG00000029082)	FAM83H (ENSCCAG00000036028) #23	MAPK15 (ENSCCAG00000022271) #24	CCDC166 (ENSCCAG00000026523) #25	ZNF707 (ENSCCAG00000025927)	ZNF623 (ENSCCAG00000013056) #27	GFUS (ENSCCAG00000034200) #29	PYCR3 (ENSCCAG00000024608) #30	TIGD5 (ENSCCAG00000019541) #35	EEF1D (ENSCCAG00000027651) #32	NAPRT (ENSCCAG00000032035) #33	MROH6 (ENSCCAG00000025194) #34	GSDMD (ENSCCAG00000027541)	ZC3H3 (ENSCCAG00000035267) #36	MAFA (ENSCCAG00000031370) #37
Marmoset	MODERN SPECIES	7	MROH1 (ENSCJAG00000021442)	ENSCJAG00000022467	HGH1 (ENSCJAG00000021446)	MAF1 (ENSCJAG00000021450) #8	SHARPIN (ENSCJAG00000021452) #9	CYC1 (ENSCJAG00000021454) #10	GPAA1 (ENSCJAG00000021455) #11	EXOSC4 (ENSCJAG00000021458) #12	OPLAH (ENSCJAG00000021459) #13	SPATC1 (ENSCJAG00000021464) #15	GRINA (ENSCJAG00000021466) #17	PARP10 (ENSCJAG00000034531) #18	PLEC (ENSCJAG00000021472) #19	NRBP2 (ENSCJAG00000021482) #20	PUF60 (ENSCJAG00000021485) #21	SCRIB (ENSCJAG00000021467) #22	FAM83H (ENSCJAG00000021492) #23	MAPK15 (ENSCJAG00000031670) #24	CCDC166 (ENSCJAG00000021422) #25	ZNF707 (ENSCJAG00000044522)	ZNF623 (ENSCJAG00000080979) #27	GFUS (ENSCJAG00000021409) #29	PYCR3 (ENSCJAG00000021413) #30	TIGD5 (ENSCJAG00000021417) #35	EEF1D (ENSCJAG00000021419) #32	NAPRT (ENSCJAG00000047504) #33	MROH6 (ENSCJAG00000021428) #34	GSDMD (ENSCJAG00000021434)	ENSCJAG00000070647	ZC3H3 (ENSCJAG00000021439) #36	MAFA (ENSCJAG00000076051) #37
Mas night monkey	MODERN SPECIES	878	ENSANAG00000037092	MROH1 (ENSANAG00000003435)	HGH1 (ENSANAG00000034029)	ENSANAG00000024398	SHARPIN (ENSANAG00000027556) #9	CYC1 (ENSANAG00000028291) #10	ENSANAG00000022979 #11	EXOSC4 (ENSANAG00000026123) #12	OPLAH (ENSANAG00000031259) #13	SPATC1 (ENSANAG00000037275) #15	GRINA (ENSANAG00000029723) #17	PARP10 (ENSANAG00000037218) #18	PLEC (ENSANAG00000032431) #19	NRBP2 (ENSANAG00000037155) #20	PUF60 (ENSANAG00000018626) #21	SCRIB (ENSANAG00000031243) #22	ENSANAG00000022500	FAM83H (ENSANAG00000035999) #23	ENSANAG00000027733 #24	CCDC166 (ENSANAG00000021505) #25
Tarsier	MODERN SPECIES	4115										GRINA (ENSTSYG00000031167) #17	PARP10 (ENSTSYG00000005439) #18	PLEC (ENSTSYG00000033419) #19	ENSTSYG00000032979	NRBP2 (ENSTSYG00000011925) #20	PUF60 (ENSTSYG00000011912) #21	SCRIB (ENSTSYG00000031772) #22	IQANK1 (ENSTSYG00000030526)	FAM83H (ENSTSYG00000037500) #23	ENSTSYG00000027884 #24	CCDC166 (ENSTSYG00000030807) #25	ZNF707 (ENSTSYG00000008714)	ZNF623 (ENSTSYG00000002532) #27	TSTA3 (ENSTSYG00000002457) #29	PYCR3 (ENSTSYG00000025805) #30	EEF1D (ENSTSYG00000037283) #32	NAPRT (ENSTSYG00000012278) #33	MROH6 (ENSTSYG00000025758) #34	GSDMD (ENSTSYG00000004801)	ZC3H3 (ENSTSYG00000034906) #36
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445.j #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Lemuriformes	ANCESTRAL SPECIES	36	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445.j #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Mouse lemur	MODERN SPECIES	31	WDR97 (ENSMICG00000015624) #7	ENSMICG00000032866	ENSMICG00000015616 #8	SHARPIN (ENSMICG00000015597) #9	CYC1 (ENSMICG00000015587) #10	ENSMICG00000030373	GPAA1 (ENSMICG00000016025) #11	ENSMICG00000044882 #14	OPLAH (ENSMICG00000017729) #13	SPATC1 (ENSMICG00000016013) #15	GRINA (ENSMICG00000030158) #17	PARP10 (ENSMICG00000016227) #18	PLEC (ENSMICG00000016160) #19	NRBP2 (ENSMICG00000032717) #20	PUF60 (ENSMICG00000012226) #21	SCRIB (ENSMICG00000012207) #22	IQANK1 (ENSMICG00000037914)	FAM83H (ENSMICG00000009499) #23	ENSMICG00000036229 #24	CCDC166 (ENSMICG00000044915) #25	ENSMICG00000010821 #26	ZNF623 (ENSMICG00000000177) #27	GML (ENSMICG00000045085)	CYP11B1 (ENSMICG00000044462)	ENSMICG00000002589	ENSMICG00000004990	BNC1 (ENSMICG00000015019)	HDGFL3 (ENSMICG00000028494)	TM6SF1 (ENSMICG00000016971)	BTBD1 (ENSMICG00000009567)	ENSMICG00000009564
Lemuriformes_a	ANCESTRAL SPECIES	40	ENSGT00860000135895	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445.j #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Greater bamboo lemur	MODERN SPECIES	52	MAF1 (ENSPSMG00000025313) #8	SHARPIN (ENSPSMG00000025323) #9	CYC1 (ENSPSMG00000025325) #10	GPAA1 (ENSPSMG00000025357) #11	EXOSC4 (ENSPSMG00000025366) #12	OPLAH (ENSPSMG00000025392) #13	ENSPSMG00000025404 #14	SPATC1 (ENSPSMG00000025405) #15	ENSPSMG00000025414	GRINA (ENSPSMG00000025421) #17	PARP10 (ENSPSMG00000025425) #18	PLEC (ENSPSMG00000025499) #19	ENSPSMG00000025504 #20	ENSPSMG00000025505 #20	PUF60 (ENSPSMG00000025524) #21	SCRIB (ENSPSMG00000025526) #22	ENSPSMG00000025528	FAM83H (ENSPSMG00000000036) #23	ENSPSMG00000000051 #24	ENSPSMG00000000058 #25
Coquerels sifaka	MODERN SPECIES	398	HGH1 (ENSPCOG00000015173)	ENSPCOG00000022922	ENSPCOG00000020777	MAF1 (ENSPCOG00000027131) #8	SHARPIN (ENSPCOG00000027890) #9	CYC1 (ENSPCOG00000026601) #10	GPAA1 (ENSPCOG00000000085) #11	EXOSC4 (ENSPCOG00000020992) #12	OPLAH (ENSPCOG00000028243) #13	SPATC1 (ENSPCOG00000026034) #15	GRINA (ENSPCOG00000019260) #17	PARP10 (ENSPCOG00000028616) #18	PLEC (ENSPCOG00000023279) #19	NRBP2 (ENSPCOG00000013703) #20	PUF60 (ENSPCOG00000027981) #21	SCRIB (ENSPCOG00000022509) #22	IQANK1 (ENSPCOG00000026461)	FAM83H (ENSPCOG00000025066) #23	ENSPCOG00000023181 #24	CCDC166 (ENSPCOG00000018628) #25	ENSPCOG00000016993 #26	ZNF623 (ENSPCOG00000018658) #27	GFUS (ENSPCOG00000027172) #29	PYCR3 (ENSPCOG00000017283) #30	EEF1D (ENSPCOG00000025419) #32	NAPRT (ENSPCOG00000025297) #33	MROH6 (ENSPCOG00000019811) #34	GSDMD (ENSPCOG00000028039)	ZC3H3 (ENSPCOG00000028174) #36	MAFA (ENSPCOG00000012800) #37	RHPN1 (ENSPCOG00000028884)
Bushbaby	MODERN SPECIES	360	HGH1 (ENSOGAG00000007423)	WDR97 (ENSOGAG00000007420) #7	MAF1 (ENSOGAG00000007418) #8	SHARPIN (ENSOGAG00000007415) #9	ENSOGAG00000028286 #10	GPAA1 (ENSOGAG00000007413) #11	EXOSC4 (ENSOGAG00000007411) #12	OPLAH (ENSOGAG00000016913) #13	ENSOGAG00000034438 #14	SPATC1 (ENSOGAG00000028061) #15	GRINA (ENSOGAG00000011958) #17	PARP10 (ENSOGAG00000033747) #18	PLEC (ENSOGAG00000034616) #19	NRBP2 (ENSOGAG00000006264) #20	PUF60 (ENSOGAG00000006259) #21	SCRIB (ENSOGAG00000033006) #22	FAM83H (ENSOGAG00000025465) #23	MAPK15 (ENSOGAG00000027991) #24	ENSOGAG00000026808 #25	ZNF623 (ENSOGAG00000014953) #27	GFUS (ENSOGAG00000014949) #29	PYCR3 (ENSOGAG00000026290) #30	TIGD5 (ENSOGAG00000024882) #35	EEF1D (ENSOGAG00000014938) #32	NAPRT (ENSOGAG00000014931) #33	MROH6 (ENSOGAG00000031450) #34	GSDMD (ENSOGAG00000014912)	ENSOGAG00000028084	ZC3H3 (ENSOGAG00000014907) #36	MAFA (ENSOGAG00000013431) #37	RHPN1 (ENSOGAG00000007174)
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Glires	ANCESTRAL SPECIES	20	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Rodentia	ANCESTRAL SPECIES	19	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Muroidea	ANCESTRAL SPECIES	14	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000153837.a.a
Chinese hamster chok1gshd	MODERN SPECIES	1	Gm35339 (ENSCGRG00001015142)	Maf1 (ENSCGRG00001016151) #8	Sharpin (ENSCGRG00001015783) #9	Cyc1 (ENSCGRG00001014828) #10	Gpaa1 (ENSCGRG00001014148) #11	Exosc4 (ENSCGRG00001020452) #12	Oplah (ENSCGRG00001020100) #13	Smpd5 (ENSCGRG00001020226) #14	Spatc1 (ENSCGRG00001019092) #15	Grina (ENSCGRG00001015189) #17	Parp10 (ENSCGRG00001012953) #18	Plec (ENSCGRG00001019864) #19	BC024139 (ENSCGRG00001014083)	Nrbp2 (ENSCGRG00001018015) #20	Puf60 (ENSCGRG00001017442) #21	Scrib (ENSCGRG00001018290) #22	Iqank1 (ENSCGRG00001015411)	Fam83h (ENSCGRG00001013512) #23	Mapk15 (ENSCGRG00001013199) #24	ENSCGRG00001017466 #25	Zfp707 (ENSCGRG00001017122) #26	Zfp623 (ENSCGRG00001009589) #27	Gfus (ENSCGRG00001015305) #29	Pycrl (ENSCGRG00001022822) #30	Tigd5 (ENSCGRG00001010766) #35	Eef1d (ENSCGRG00001014276) #32	Naprt (ENSCGRG00001013665) #33	Mroh6 (ENSCGRG00001013151) #34	Gsdmd (ENSCGRG00001012963)	Zc3h3 (ENSCGRG00001016268) #36	Rhpn1 (ENSCGRG00001008904)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.s.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Northern American deer mouse	MODERN SPECIES	12	Maf1 (ENSPEMG00000016334) #8	Sharpin (ENSPEMG00000008905) #9	Cyc1 (ENSPEMG00000005838) #10	Gpaa1 (ENSPEMG00000018792) #11	Exosc4 (ENSPEMG00000017031) #12	Oplah (ENSPEMG00000013701) #13	Smpd5 (ENSPEMG00000015740) #14	Spatc1 (ENSPEMG00000017647) #15	ENSPEMG00000030413 #16	Grina (ENSPEMG00000000642) #17	Plec (ENSPEMG00000011922) #19	BC024139 (ENSPEMG00000014082)	ENSPEMG00000025582 #20	ENSPEMG00000026342 #20	Puf60 (ENSPEMG00000008820) #21	Scrib (ENSPEMG00000011210) #22	Iqank1 (ENSPEMG00000016003)	Fam83h (ENSPEMG00000025375) #23	Mapk15 (ENSPEMG00000002190) #24	ENSPEMG00000031059 #25	Zfp707 (ENSPEMG00000010804) #26	Zfp623 (ENSPEMG00000011533) #27	Gfus (ENSPEMG00000018796) #29	Pycrl (ENSPEMG00000008129) #30	Tigd5 (ENSPEMG00000006475) #35	Eef1d (ENSPEMG00000012989) #32	Naprt (ENSPEMG00000001062) #33	Mroh6 (ENSPEMG00000009446) #34	ENSPEMG00000015784	Zc3h3 (ENSPEMG00000013893) #36	Rhpn1 (ENSPEMG00000014071)
Prairie vole	MODERN SPECIES	2	Gm35339 (ENSMOCG00000022185)	Maf1 (ENSMOCG00000013095) #8	Sharpin (ENSMOCG00000014181) #9	Cyc1 (ENSMOCG00000013275) #10	Gpaa1 (ENSMOCG00000021944) #11	Exosc4 (ENSMOCG00000020295) #12	Oplah (ENSMOCG00000010713) #13	Smpd5 (ENSMOCG00000004813) #14	Spatc1 (ENSMOCG00000012336) #15	Grina (ENSMOCG00000003657) #17	Parp10 (ENSMOCG00000000179) #18	Plec (ENSMOCG00000000674) #19	BC024139 (ENSMOCG00000019744)	Nrbp2 (ENSMOCG00000002147) #20	Puf60 (ENSMOCG00000018780) #21	Scrib (ENSMOCG00000011374) #22	Iqank1 (ENSMOCG00000004464)	Fam83h (ENSMOCG00000007730) #23	Mapk15 (ENSMOCG00000011658) #24	ENSMOCG00000019019 #25	Zfp707 (ENSMOCG00000017775) #26	Zfp623 (ENSMOCG00000014910) #27	Gfus (ENSMOCG00000008645) #29	Pycrl (ENSMOCG00000006633) #30	Tigd5 (ENSMOCG00000004161) #35	ENSMOCG00000010950 #32	Naprt (ENSMOCG00000017024) #33	Mroh6 (ENSMOCG00000011231) #34	Zc3h3 (ENSMOCG00000000733) #36	Mafa (ENSMOCG00000021750) #37	Rhpn1 (ENSMOCG00000001034)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Mus	ANCESTRAL SPECIES	11	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Mouse	MODERN SPECIES	6	Maf1 (ENSMUSG00000022553) #8	Sharpin (ENSMUSG00000022552) #9	Cyc1 (ENSMUSG00000022551) #10	Gpaa1 (ENSMUSG00000022561) #11	Exosc4 (ENSMUSG00000034259) #12	Oplah (ENSMUSG00000022562) #13	Smpd5 (ENSMUSG00000071724) #14	Spatc1 (ENSMUSG00000049653) #15	Grina (ENSMUSG00000022564) #17	Parp10 (ENSMUSG00000063268) #18	Plec (ENSMUSG00000022565) #19	BC024139 (ENSMUSG00000044361)	Eppk1 (ENSMUSG00000118671)	Nrbp2 (ENSMUSG00000075590) #20	Puf60 (ENSMUSG00000002524) #21	Scrib (ENSMUSG00000022568) #22	Iqank1 (ENSMUSG00000102018)	Fam83h (ENSMUSG00000046761) #23	Mapk15 (ENSMUSG00000063704) #24	Ccdc166 (ENSMUSG00000098176)	Zfp707 (ENSMUSG00000034429) #26	Zfp623 (ENSMUSG00000050846) #27	Gfus (ENSMUSG00000022570) #29	Pycrl (ENSMUSG00000022571) #30	Tigd5 (ENSMUSG00000103906) #35	Eef1d (ENSMUSG00000055762) #32	Naprt (ENSMUSG00000022574) #33	Mroh6 (ENSMUSG00000098678) #34	Gsdmd (ENSMUSG00000022575)	Zc3h3 (ENSMUSG00000075600) #36	Mafa (ENSMUSG00000047591) #37
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
spretus	MODERN SPECIES	6	Maf1 (MGP_SPRETEiJ_G0020826) #8	Sharpin (MGP_SPRETEiJ_G0020825) #9	Cyc1 (MGP_SPRETEiJ_G0020824) #10	Gpaa1 (MGP_SPRETEiJ_G0020823) #11	Exosc4 (MGP_SPRETEiJ_G0020822) #12	Oplah (MGP_SPRETEiJ_G0020821) #13	Smpd5 (MGP_SPRETEiJ_G0020820) #14	Spatc1 (MGP_SPRETEiJ_G0020819) #15	Grina (MGP_SPRETEiJ_G0020818) #17	Parp10 (MGP_SPRETEiJ_G0020817) #18	Plec (MGP_SPRETEiJ_G0020816) #19	BC024139 (MGP_SPRETEiJ_G0020815)	MGP_SPRETEiJ_G0020814	MGP_SPRETEiJ_G0020813 #20	Puf60 (MGP_SPRETEiJ_G0020812) #21	Scrib (MGP_SPRETEiJ_G0020811) #22	MGP_SPRETEiJ_G0020810	Fam83h (MGP_SPRETEiJ_G0020809) #23	Mapk15 (MGP_SPRETEiJ_G0020808) #24	Ccdc166 (MGP_SPRETEiJ_G0020807)	Zfp707 (MGP_SPRETEiJ_G0020806) #26	Zfp623 (MGP_SPRETEiJ_G0020805) #27	MGP_SPRETEiJ_G0020804 #29	Pycrl (MGP_SPRETEiJ_G0020803) #30	Tigd5 (MGP_SPRETEiJ_G0020802) #35	Eef1d (MGP_SPRETEiJ_G0020801) #32	Naprt (MGP_SPRETEiJ_G0020800) #33	Mroh6 (MGP_SPRETEiJ_G0020799) #34	Gsdmd (MGP_SPRETEiJ_G0020798)	Zc3h3 (MGP_SPRETEiJ_G0020797) #36	Mafa (MGP_SPRETEiJ_G0020796) #37
Steppe mouse	MODERN SPECIES	2988	Sharpin (ENSMSIG00000023629) #9	Cyc1 (ENSMSIG00000023622) #10	Gpaa1 (ENSMSIG00000023577) #11	Exosc4 (ENSMSIG00000023545) #12	Oplah (ENSMSIG00000023461) #13	Smpd5 (ENSMSIG00000023442) #14	Spatc1 (ENSMSIG00000023411) #15	ENSMSIG00000023406 #16	Grina (ENSMSIG00000023388) #17	Parp10 (ENSMSIG00000023344) #18	Plec (ENSMSIG00000022620) #19	ENSMSIG00000022591	BC024139 (ENSMSIG00000022558)	Nrbp2 (ENSMSIG00000022514) #20	Puf60 (ENSMSIG00000022454) #21	ENSMSIG00000021768 #22	Fam83h (ENSMSIG00000021720) #23	Mapk15 (ENSMSIG00000021708) #24	ENSMSIG00000021702 #25	Zfp707 (ENSMSIG00000021670) #26	Zfp623 (ENSMSIG00000021664) #27	ENSMSIG00000021506 #29	Pycrl (ENSMSIG00000021499) #30	Tigd5 (ENSMSIG00000021495) #35	Eef1d (ENSMSIG00000021333) #32	Naprt (ENSMSIG00000021307) #33	Mroh6 (ENSMSIG00000021287) #34	Gsdmd (ENSMSIG00000021268)	Zc3h3 (ENSMSIG00000021237) #36	Mafa (ENSMSIG00000021226) #37	Rhpn1 (ENSMSIG00000021180)
Ryukyu mouse	MODERN SPECIES	6	MGP_CAROLIEiJ_G0019924 #7	Maf1 (MGP_CAROLIEiJ_G0019923) #8	Sharpin (MGP_CAROLIEiJ_G0019922) #9	Cyc1 (MGP_CAROLIEiJ_G0019921) #10	Gpaa1 (MGP_CAROLIEiJ_G0019920) #11	Exosc4 (MGP_CAROLIEiJ_G0019919) #12	Oplah (MGP_CAROLIEiJ_G0019918) #13	Smpd5 (MGP_CAROLIEiJ_G0019917) #14	Spatc1 (MGP_CAROLIEiJ_G0019916) #15	Grina (MGP_CAROLIEiJ_G0019915) #17	Parp10 (MGP_CAROLIEiJ_G0019914) #18	Plec (MGP_CAROLIEiJ_G0019913) #19	BC024139 (MGP_CAROLIEiJ_G0019912)	Nrbp2 (MGP_CAROLIEiJ_G0019911) #20	Puf60 (MGP_CAROLIEiJ_G0019910) #21	Scrib (MGP_CAROLIEiJ_G0019909) #22	MGP_CAROLIEiJ_G0019908	Fam83h (MGP_CAROLIEiJ_G0019907) #23	Mapk15 (MGP_CAROLIEiJ_G0019906) #24	Zfp623 (MGP_CAROLIEiJ_G0019905) #27	MGP_CAROLIEiJ_G0019904 #29	Pycrl (MGP_CAROLIEiJ_G0019903) #30	Tigd5 (MGP_CAROLIEiJ_G0019902) #35	Eef1d (MGP_CAROLIEiJ_G0019901) #32	Naprt (MGP_CAROLIEiJ_G0019900) #33	Mroh6 (MGP_CAROLIEiJ_G0019899) #34	Gsdmd (MGP_CAROLIEiJ_G0019898)	Zc3h3 (MGP_CAROLIEiJ_G0019897) #36	Mafa (MGP_CAROLIEiJ_G0019896) #37	Rhpn1 (MGP_CAROLIEiJ_G0019895)	Top1mt (MGP_CAROLIEiJ_G0019894)
Shrew mouse	MODERN SPECIES	8	Gm35339 (MGP_PahariEiJ_G0019934)	Maf1 (MGP_PahariEiJ_G0019933) #8	Sharpin (MGP_PahariEiJ_G0019932) #9	Cyc1 (MGP_PahariEiJ_G0019931) #10	Gpaa1 (MGP_PahariEiJ_G0019930) #11	Exosc4 (MGP_PahariEiJ_G0019929) #12	Oplah (MGP_PahariEiJ_G0019928) #13	Smpd5 (MGP_PahariEiJ_G0019927) #14	Spatc1 (MGP_PahariEiJ_G0019926) #15	Grina (MGP_PahariEiJ_G0019925) #17	Parp10 (MGP_PahariEiJ_G0019924) #18	Plec (MGP_PahariEiJ_G0019923) #19	BC024139 (MGP_PahariEiJ_G0019922)	Nrbp2 (MGP_PahariEiJ_G0019921) #20	Puf60 (MGP_PahariEiJ_G0019920) #21	Scrib (MGP_PahariEiJ_G0019919) #22	MGP_PahariEiJ_G0019918	Fam83h (MGP_PahariEiJ_G0019917) #23	Mapk15 (MGP_PahariEiJ_G0019916) #24	Ccdc166 (MGP_PahariEiJ_G0019915)	Zfp707 (MGP_PahariEiJ_G0019914) #26	Zfp623 (MGP_PahariEiJ_G0019913) #27	MGP_PahariEiJ_G0019912 #29	Pycrl (MGP_PahariEiJ_G0019911) #30	Tigd5 (MGP_PahariEiJ_G0019910) #35	Eef1d (MGP_PahariEiJ_G0019909) #32	Naprt (MGP_PahariEiJ_G0019908) #33	Mroh6 (MGP_PahariEiJ_G0019907) #34	Gsdmd (MGP_PahariEiJ_G0019906)	Zc3h3 (MGP_PahariEiJ_G0019905) #36	Mafa (MGP_PahariEiJ_G0019904) #37
Rat	MODERN SPECIES	17	Sharpin (ENSRNOG00000012812) #9	Cyc1 (ENSRNOG00000012457) #10	Gpaa1 (ENSRNOG00000029280) #11	Exosc4 (ENSRNOG00000012348) #12	Oplah (ENSRNOG00000011781) #13	Smpd5 (ENSRNOG00000037299) #14	Spatc1 (ENSRNOG00000029590) #15	ENSRNOG00000062934 #16	Grina (ENSRNOG00000029941) #17	Parp10 (ENSRNOG00000004361) #18	Plec (ENSRNOG00000023781) #19	LOC680875 (ENSRNOG00000023828)	Eppk1 (ENSRNOG00000068431)	Nrbp2 (ENSRNOG00000029535) #20	Puf60 (ENSRNOG00000009960) #21	Scrib (ENSRNOG00000032574) #22	Iqank1 (ENSRNOG00000063360)	Fam83h (ENSRNOG00000030264) #23	Mapk15 (ENSRNOG00000009336) #24	Ccdc166 (ENSRNOG00000047521) #25	Zfp707l1 (ENSRNOG00000057901) #26	Zfp623 (ENSRNOG00000009302) #27	Gfus (ENSRNOG00000009020) #29	Tigd5 (ENSRNOG00000008686)	Pycr3 (ENSRNOG00000021638) #32	Naprt (ENSRNOG00000007939) #33	Mroh6 (ENSRNOG00000032231) #34	Gsdmd (ENSRNOG00000007728)	Zc3h3 (ENSRNOG00000007684) #36	Mafa (ENSRNOG00000007668) #37	Rhpn1 (ENSRNOG00000007597)
Upper Galilee mountains blind mole rat	MODERN SPECIES	887	Tssk5 (ENSNGAG00000019609)	Hgh1 (ENSNGAG00000020947)	Maf1 (ENSNGAG00000022741) #8	Sharpin (ENSNGAG00000013718) #9	Cyc1 (ENSNGAG00000016872) #10	Gpaa1 (ENSNGAG00000021150) #11	Exosc4 (ENSNGAG00000022428) #12	Oplah (ENSNGAG00000023143) #13	Spatc1 (ENSNGAG00000024326) #15	Grina (ENSNGAG00000023778) #17	Parp10 (ENSNGAG00000023968) #18	Plec (ENSNGAG00000008931) #19	BC024139 (ENSNGAG00000018326)	Nrbp2 (ENSNGAG00000017478) #20	Puf60 (ENSNGAG00000000712) #21	Scrib (ENSNGAG00000020420) #22	Fam83h (ENSNGAG00000020634) #23	Mapk15 (ENSNGAG00000013212) #24	ENSNGAG00000022071 #25	Zfp707 (ENSNGAG00000008924) #26	Gfus (ENSNGAG00000016673) #29	Pycrl (ENSNGAG00000020709) #30	Tigd5 (ENSNGAG00000016409) #35	Eef1d (ENSNGAG00000020992) #32	Naprt (ENSNGAG00000024126) #33	Gsdmd (ENSNGAG00000010971)	Zc3h3 (ENSNGAG00000008574) #36	Mafa (ENSNGAG00000000584) #37	Rhpn1 (ENSNGAG00000022376)	Top1mt (ENSNGAG00000000704)
Lesser Egyptian jerboa	MODERN SPECIES	59	Sharpin (ENSJJAG00000011432) #9	Cyc1 (ENSJJAG00000013463) #10	ENSJJAG00000023798	ENSJJAG00000018517 #11	ENSJJAG00000020202 #11	Exosc4 (ENSJJAG00000009655) #12	Oplah (ENSJJAG00000023595) #13	Smpd5 (ENSJJAG00000018992) #14	Spatc1 (ENSJJAG00000019701) #15	ENSJJAG00000015533 #17	Parp10 (ENSJJAG00000017801) #18	Plec (ENSJJAG00000012390) #19	BC024139 (ENSJJAG00000016163)	Nrbp2 (ENSJJAG00000015418) #20	Puf60 (ENSJJAG00000001076) #21	Scrib (ENSJJAG00000016202) #22	Iqank1 (ENSJJAG00000022777)	Fam83h (ENSJJAG00000021217) #23	Mapk15 (ENSJJAG00000001348) #24	ENSJJAG00000024374 #25	Zfp707 (ENSJJAG00000015665) #26	Gfus (ENSJJAG00000015612) #29	Pycrl (ENSJJAG00000006190) #30	Tigd5 (ENSJJAG00000018444) #35	Eef1d (ENSJJAG00000012433) #32	Naprt (ENSJJAG00000023431) #33	Mroh6 (ENSJJAG00000021126) #34	Gsdmd (ENSJJAG00000014659)	Zc3h3 (ENSJJAG00000023757) #36	Mafa (ENSJJAG00000009961) #37	Rhpn1 (ENSJJAG00000019332)
Kangaroo rat	MODERN SPECIES	497	Hsf1 (ENSDORG00000002333)	Bop1 (ENSDORG00000004860)	Mroh1 (ENSDORG00000001933)	Tssk5 (ENSDORG00000026586)	ENSDORG00000024733	Cyc1 (ENSDORG00000008466) #10	Maf1 (ENSDORG00000008473) #8	Gpaa1 (ENSDORG00000008463) #11	Exosc4 (ENSDORG00000008461) #12	Oplah (ENSDORG00000010841) #13	ENSDORG00000010839 #14	ENSDORG00000029086 #17	ENSDORG00000029564 #19	Nrbp2 (ENSDORG00000004589) #20	Puf60 (ENSDORG00000004585) #21	Scrib (ENSDORG00000004583) #22	Iqank1 (ENSDORG00000027220)	ENSDORG00000025620 #23	Zfp623 (ENSDORG00000026298) #27	Gfus (ENSDORG00000000596) #29	Pycrl (ENSDORG00000000595) #30	Eef1d (ENSDORG00000000593) #32	Naprt (ENSDORG00000000591) #33	Gsdmd (ENSDORG00000000580)	Tigd5 (ENSDORG00000025658) #35	Zc3h3 (ENSDORG00000023832) #36	Rhpn1 (ENSDORG00000000889)	Top1mt (ENSDORG00000012850)	Zfp41 (ENSDORG00000026127)	ENSDORG00000011422	Ly6h (ENSDORG00000023303)
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00940000156930	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Hystricomorpha_b	ANCESTRAL SPECIES	27	ENSGT00940000156930	ENSGT00390000016546	ENSGT00940000164199 #7	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Long-tailed chinchilla	MODERN SPECIES	161	WDR97 (ENSCLAG00000012513) #7	MAF1 (ENSCLAG00000015775) #8	SHARPIN (ENSCLAG00000012370) #9	CYC1 (ENSCLAG00000012269) #10	GPAA1 (ENSCLAG00000015248) #11	EXOSC4 (ENSCLAG00000014676) #12	OPLAH (ENSCLAG00000015961) #13	SPATC1 (ENSCLAG00000011504) #15	GRINA (ENSCLAG00000010594) #17	PARP10 (ENSCLAG00000013744) #18	PLEC (ENSCLAG00000012830) #19	ENSCLAG00000017854	ENSCLAG00000015256	ENSCLAG00000017347 #20	PUF60 (ENSCLAG00000009154) #21	SCRIB (ENSCLAG00000010805) #22	IQANK1 (ENSCLAG00000013041)	FAM83H (ENSCLAG00000013519) #23	MAPK15 (ENSCLAG00000011011) #24	CCDC166 (ENSCLAG00000008849) #25	ENSCLAG00000011044 #26	ZNF623 (ENSCLAG00000014678) #27	GFUS (ENSCLAG00000008907) #29	PYCR3 (ENSCLAG00000010276) #30	TIGD5 (ENSCLAG00000018021) #35	ENSCLAG00000008571 #32	NAPRT (ENSCLAG00000014862) #33	MROH6 (ENSCLAG00000014422) #34	GSDMD (ENSCLAG00000009094)	ZC3H3 (ENSCLAG00000009999) #36	MAFA (ENSCLAG00000018099) #37
Degu	MODERN SPECIES	145	SCX (ENSODEG00000014188)	MROH1 (ENSODEG00000014329)	HGH1 (ENSODEG00000012697)	ENSODEG00000012938 #8	SHARPIN (ENSODEG00000012889) #9	CYC1 (ENSODEG00000013780) #10	GPAA1 (ENSODEG00000012936) #11	EXOSC4 (ENSODEG00000013951) #12	ENSODEG00000013115 #13	SPATC1 (ENSODEG00000013869) #15	GRINA (ENSODEG00000012971) #17	PARP10 (ENSODEG00000014276) #18	PLEC (ENSODEG00000014671) #19	NRBP2 (ENSODEG00000013124) #20	ENSODEG00000014024 #21	SCRIB (ENSODEG00000013795) #22	IQANK1 (ENSODEG00000013696)	FAM83H (ENSODEG00000014158) #23	MAPK15 (ENSODEG00000014999) #24	CCDC166 (ENSODEG00000014189) #25	ENSODEG00000014226 #26	ENSODEG00000013485	GFUS (ENSODEG00000014465) #29	PYCR3 (ENSODEG00000015350) #30	TIGD5 (ENSODEG00000013505) #35	ENSODEG00000013624 #32	NAPRT (ENSODEG00000014091) #33	MROH6 (ENSODEG00000013415) #34	GSDMD (ENSODEG00000014859)	ZC3H3 (ENSODEG00000014239) #36	MAFA (ENSODEG00000020376) #37
Guinea pig	MODERN SPECIES	95	ENSCPOG00000013845	HGH1 (ENSCPOG00000024253)	ENSCPOG00000027308 #7	MAF1 (ENSCPOG00000013249) #8	SHARPIN (ENSCPOG00000013242) #9	CYC1 (ENSCPOG00000013237) #10	GPAA1 (ENSCPOG00000007917) #11	EXOSC4 (ENSCPOG00000022671) #12	OPLAH (ENSCPOG00000011340) #13	ENSCPOG00000009880 #15	GRINA (ENSCPOG00000009878) #17	PARP10 (ENSCPOG00000014235) #18	PLEC (ENSCPOG00000007957) #19	ENSCPOG00000012436 #20	PUF60 (ENSCPOG00000014613) #21	SCRIB (ENSCPOG00000014605) #22	IQANK1 (ENSCPOG00000020895)	FAM83H (ENSCPOG00000013323) #23	MAPK15 (ENSCPOG00000013318) #24	CCDC166 (ENSCPOG00000024168) #25	ENSCPOG00000032341 #26	ZNF623 (ENSCPOG00000009794) #27	GFUS (ENSCPOG00000000051) #29	PYCR3 (ENSCPOG00000039640) #30	TIGD5 (ENSCPOG00000039267) #35	EEF1D (ENSCPOG00000000048) #32	NAPRT (ENSCPOG00000000047) #33	MROH6 (ENSCPOG00000000046) #34	GSDMD (ENSCPOG00000000044)	ZC3H3 (ENSCPOG00000006248) #36	MAFA (ENSCPOG00000021977) #37
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Marmotini	ANCESTRAL SPECIES	10	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00950000185460 #16	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a.t #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000161068 #36	ENSGT00940000162747 #37
Squirrel	MODERN SPECIES	70	MROH1 (ENSSTOG00000028121)	ENSSTOG00000026439	HGH1 (ENSSTOG00000022576)	MAF1 (ENSSTOG00000002711) #8	SHARPIN (ENSSTOG00000002681) #9	CYC1 (ENSSTOG00000002670) #10	GPAA1 (ENSSTOG00000026163) #11	EXOSC4 (ENSSTOG00000002632) #12	ENSSTOG00000031359	OPLAH (ENSSTOG00000002587) #13	ENSSTOG00000026841 #14	ENSSTOG00000025838 #17	PLEC (ENSSTOG00000023061) #19	NRBP2 (ENSSTOG00000023485) #20	PUF60 (ENSSTOG00000025037) #21	SCRIB (ENSSTOG00000003571) #22	FAM83H (ENSSTOG00000020789) #23	MAPK15 (ENSSTOG00000024211) #24	GFUS (ENSSTOG00000003700) #29	PYCR3 (ENSSTOG00000003681) #30	EEF1D (ENSSTOG00000000025) #32	NAPRT (ENSSTOG00000000024) #33	GSDMD (ENSSTOG00000025332)	ZC3H3 (ENSSTOG00000004358) #36	MAFA (ENSSTOG00000026889) #37	RHPN1 (ENSSTOG00000020790)	ZNF696 (ENSSTOG00000033270) #28	GLI4 (ENSSTOG00000023930)	ZFP41 (ENSSTOG00000022550)	LY6H (ENSSTOG00000001914)	ENSSTOG00000001472
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000154025.a #22
Pika	MODERN SPECIES	3840																ENSOPRG00000000434 #22
Atlantogenata	ANCESTRAL SPECIES	64	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000166965	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00940000153837.a.a	ENSGT00940000163360
Afrotheria	ANCESTRAL SPECIES	100	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000166965	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000164153 #26	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000153837.a.a
Afrotheria_a	ANCESTRAL SPECIES	112	ENSGT00390000016546	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00520000055666.a #15	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00680000100508	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000166965	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000163183 #27	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000162472 #34	ENSGT00950000183140.a.a.m.a.b	ENSGT00940000153837.a.a	ENSGT00940000163360	ENSGT00940000153378.a.a
Hyrax	MODERN SPECIES	6063														ENSPCAG00000014872 #20	PUF60 (ENSPCAG00000014837) #21	SCRIB (ENSPCAG00000014585) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000153527.d.a.a.a	ENSGT00940000153527.d.a.b.b	ENSGT00940000153527.d.a.a.b	ENSGT00940000162162.a	ENSGT00550000075201	ENSGT00940000164787	ENSGT01030000234558.D.b	ENSGT00940000154149.b.b	ENSGT00550000075110	ENSGT00940000159323	ENSGT00940000161246
Opossum	MODERN SPECIES	2	MAF1 (ENSMODG00000010502) #8	ENSMODG00000010491 #9	CYC1 (ENSMODG00000010461) #10	GPAA1 (ENSMODG00000010444) #11	EXOSC4 (ENSMODG00000010435) #12	OPLAH (ENSMODG00000010431) #13	ENSMODG00000024098 #14	ENSMODG00000010411 #15	GRINA (ENSMODG00000010407) #17	ENSMODG00000010393 #18	ENSMODG00000039830	PLEC (ENSMODG00000010370) #19	ENSMODG00000027318	NRBP2 (ENSMODG00000009194) #20	PUF60 (ENSMODG00000009161) #21	SCRIB (ENSMODG00000009102) #22	ENSMODG00000041667	ENSMODG00000024129	FAM83H (ENSMODG00000009062) #23	MAPK15 (ENSMODG00000009057) #24	ENSMODG00000043698 #25	ENSMODG00000027867	ENSMODG00000028280	ENSMODG00000046661	ENSMODG00000008983	ENSMODG00000029705	ENSMODG00000037227	ENSMODG00000008972	ENSMODG00000050003	ENSMODG00000043895	ENSMODG00000029594
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000153527.d.a.a.a	ENSGT00940000153527.d.a.b.b	ENSGT00940000153527.d.a.b.a.a	ENSGT00940000153527.d.a.a.b	ENSGT00940000162162.a	ENSGT00550000075201	ENSGT00940000164787	ENSGT00950000182890.D.c.a.a.a.a.b	ENSGT01030000234558.D.b	ENSGT00940000154149.b.b	ENSGT00550000075110
Diprotodontia	ANCESTRAL SPECIES	51	ENSGT00940000163397	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000153527.d.a.a.a	ENSGT00940000153527.d.a.b.b	ENSGT00940000153527.d.a.b.a.a	ENSGT00940000153527.d.a.a.b	ENSGT00940000162162.a	ENSGT00550000075201
Diprotodontia_a	ANCESTRAL SPECIES	48	ENSGT00940000163397	ENSGT00860000135895	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000153527.d.a.a.a	ENSGT00940000153527.d.a.b.b	ENSGT00940000153527.d.a.b.a.b	ENSGT00940000153527.d.a.b.a.a.c	ENSGT00940000153527.d.a.a.b	ENSGT00940000162162.a	ENSGT00550000075201.a
Common wonbat	MODERN SPECIES	764	ENSVURG00010024808	ENSVURG00010024809	MAF1 (ENSVURG00010024810) #8	SHARPIN (ENSVURG00010024811) #9	CYC1 (ENSVURG00010024812) #10	GPAA1 (ENSVURG00010024813) #11	EXOSC4 (ENSVURG00010024814) #12	OPLAH (ENSVURG00010024815) #13	ENSVURG00010024816 #14	ENSVURG00010024817 #15	GRINA (ENSVURG00010024819) #17	ENSVURG00010024821 #18	PLEC (ENSVURG00010024822) #19	NRBP2 (ENSVURG00010024826) #20	PUF60 (ENSVURG00010024828) #21	SCRIB (ENSVURG00010024832) #22	IQANK1 (ENSVURG00010024844)	FAM83H (ENSVURG00010024845) #23	MAPK15 (ENSVURG00010024847) #24	ENSVURG00010024851	ENSVURG00010024853	ENSVURG00010024854	ENSVURG00010024856	ENSVURG00010024858	ENSVURG00010024860	ENSVURG00010024862	ENSVURG00010024868	ENSVURG00010024872	ENSVURG00010024873	ENSVURG00010024876	ENSVURG00010024877
koala	MODERN SPECIES	58	ENSPCIG00000001680	HGH1 (ENSPCIG00000001697)	ENSPCIG00000009087	MAF1 (ENSPCIG00000009090) #8	SHARPIN (ENSPCIG00000009092) #9	CYC1 (ENSPCIG00000009095) #10	GPAA1 (ENSPCIG00000009098) #11	EXOSC4 (ENSPCIG00000009102) #12	OPLAH (ENSPCIG00000009104) #13	ENSPCIG00000009107 #14	ENSPCIG00000034553 #15	GRINA (ENSPCIG00000009114) #17	PLEC (ENSPCIG00000014981) #19	NRBP2 (ENSPCIG00000020290) #20	PUF60 (ENSPCIG00000020270) #21	SCRIB (ENSPCIG00000019027) #22	IQANK1 (ENSPCIG00000019010)	FAM83H (ENSPCIG00000019007) #23	ENSPCIG00000019005 #24	ENSPCIG00000037171 #24	ENSPCIG00000019004 #25	ENSPCIG00000019002	ENSPCIG00000036092	ENSPCIG00000018997	ENSPCIG00000018995	ENSPCIG00000018993	ENSPCIG00000018987	ENSPCIG00000034035	ENSPCIG00000018986	ENSPCIG00000018985	ENSPCIG00000018981
Tasmanian devil	MODERN SPECIES		ENSSHAG00000024245	ENSSHAG00000030642	ENSSHAG00000006040 #9	CYC1 (ENSSHAG00000005965) #10	GPAA1 (ENSSHAG00000005593) #11	EXOSC4 (ENSSHAG00000021835) #12	OPLAH (ENSSHAG00000004117) #13	ENSSHAG00000029133 #15	ENSSHAG00000029231 #14	GRINA (ENSSHAG00000003325) #17	ENSSHAG00000002568 #18	PLEC (ENSSHAG00000009020) #19	ENSSHAG00000025999	NRBP2 (ENSSHAG00000007168) #20	PUF60 (ENSSHAG00000006668) #21	SCRIB (ENSSHAG00000005699) #22	IQANK1 (ENSSHAG00000004412)	FAM83H (ENSSHAG00000025206) #23	ENSSHAG00000002851 #24	ENSSHAG00000002103 #25	ENSSHAG00000007687	ENSSHAG00000025764	ENSSHAG00000006832	ENSSHAG00000027153	ENSSHAG00000005418	ENSSHAG00000003249	ENSSHAG00000029049	ENSSHAG00000026998	ENSSHAG00000031709	ENSSHAG00000021169	ENSSHAG00000031387
Sauria	ANCESTRAL SPECIES		ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Lepidosauria	ANCESTRAL SPECIES	100	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23
Episquamata	ANCESTRAL SPECIES	25	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000155080	ENSGT00940000154406.b	ENSGT00390000013639	ENSGT00940000157134	ENSGT00390000009790	ENSGT00940000155064	ENSGT00390000017590	ENSGT00390000011354	ENSGT00940000166022	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Common wall lizard	MODERN SPECIES	15	GPAA1 (ENSPMRG00000010617) #11	EXOSC4 (ENSPMRG00000010600) #12	OPLAH (ENSPMRG00000010371) #13	ENSPMRG00000010326 #14	ENSPMRG00000010320 #15	ENSPMRG00000010309 #17	PARP10 (ENSPMRG00000010299) #18	ENSPMRG00000010289	PLEC (ENSPMRG00000010248) #19	ENSPMRG00000010227	ENSPMRG00000010216	ENSPMRG00000010207	NRBP2 (ENSPMRG00000010166) #20	PUF60 (ENSPMRG00000010146) #21	ENSPMRG00000010143	SCRIB (ENSPMRG00000009985) #22	IQANK1 (ENSPMRG00000009930)	FAM83H (ENSPMRG00000009924) #23	MAPK15 (ENSPMRG00000009898) #24	ENSPMRG00000009887	ENSPMRG00000009880
Argentine black and white tegu	MODERN SPECIES	13	ENSSMRG00000010004 #9	CYC1 (ENSSMRG00000010005) #10	GPAA1 (ENSSMRG00000010007) #11	EXOSC4 (ENSSMRG00000010010) #12	OPLAH (ENSSMRG00000010022) #13	ENSSMRG00000010025 #14	ENSSMRG00000010029 #15	GRINA (ENSSMRG00000010030) #17	PARP10 (ENSSMRG00000010032) #18	PLEC (ENSSMRG00000010044) #19	ENSSMRG00000011660	ENSSMRG00000011661	EPPK1 (ENSSMRG00000011663)	NRBP2 (ENSSMRG00000011687) #20	PUF60 (ENSSMRG00000011697) #21	SCRIB (ENSSMRG00000011770) #22	ENSSMRG00000011783	IQANK1 (ENSSMRG00000011784)	FAM83H (ENSSMRG00000011786) #23	ENSSMRG00000011792 #24	ENSSMRG00000011794	ENSSMRG00000011800
Toxicofera	ANCESTRAL SPECIES	48	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Lizard	MODERN SPECIES	1964															ENSACAG00000001645 #21	ENSACAG00000043604 #22
Elapidae	ANCESTRAL SPECIES	32	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Indian cobra	MODERN SPECIES	2	MAF1 (ENSNNAG00000001949) #8	ENSNNAG00000001964 #9	CYC1 (ENSNNAG00000001977) #10	GPAA1 (ENSNNAG00000001992) #11	EXOSC4 (ENSNNAG00000002010) #12	OPLAH (ENSNNAG00000002095) #13	ENSNNAG00000002429 #14	SPATC1 (ENSNNAG00000002438) #15	GRINA (ENSNNAG00000002445) #17	PARP10 (ENSNNAG00000002462) #18	PLEC (ENSNNAG00000003005) #19	ENSNNAG00000010240	EPPK1 (ENSNNAG00000010355)	ENSNNAG00000010461 #20	PUF60 (ENSNNAG00000010515) #21	SCRIB (ENSNNAG00000010593) #22	IQANK1 (ENSNNAG00000010851)	FAM83H (ENSNNAG00000010912) #23	MAPK15 (ENSNNAG00000010938) #24	CCDC166 (ENSNNAG00000011002) #25	ENSNNAG00000011010	ENSNNAG00000011032	ENSNNAG00000011050	GPT (ENSNNAG00000011100)	ENSNNAG00000011580
Elapidae_a	ANCESTRAL SPECIES	113	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Acanthophiinae	ANCESTRAL SPECIES	106	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00960000192667	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265.b
Mainland tiger snake	MODERN SPECIES	492														NRBP2 (ENSNSUG00000007709) #20	PUF60 (ENSNSUG00000007708) #21	SCRIB (ENSNSUG00000007706) #22	IQANK1 (ENSNSUG00000007704)	FAM83H (ENSNSUG00000007702) #23	MAPK15 (ENSNSUG00000007701) #24	ENSNSUG00000007700
Eastern brown snake	MODERN SPECIES	187	ENSPTXG00000018365 #9	CYC1 (ENSPTXG00000018362) #10	GPAA1 (ENSPTXG00000018360) #11	EXOSC4 (ENSPTXG00000018358) #12	OPLAH (ENSPTXG00000018284) #13	ENSPTXG00000018283 #14	ENSPTXG00000018282 #15	ENSPTXG00000018281	ENSPTXG00000018280	ENSPTXG00000018279 #18	PLEC (ENSPTXG00000018278) #19	ENSPTXG00000018276	EPPK1 (ENSPTXG00000018275)	NRBP2 (ENSPTXG00000018267) #20	PUF60 (ENSPTXG00000018264) #21	SCRIB (ENSPTXG00000018260) #22	IQANK1 (ENSPTXG00000018257)	FAM83H (ENSPTXG00000018256) #23	MAPK15 (ENSPTXG00000018254) #24	ENSPTXG00000018253
Blue-lipped sea krait	MODERN SPECIES	8289																SCRIB (ENSLLTG00000016633) #22
tuatara	MODERN SPECIES	35											ENSSPUG00000013549 #20	ENSSPUG00000013543 #20	ENSSPUG00000013538	ENSSPUG00000013531	PUF60 (ENSSPUG00000013518) #21	SCRIB (ENSSPUG00000012871) #22	IQANK1 (ENSSPUG00000012756)	FAM83H (ENSSPUG00000012746) #23
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Archosauria	ANCESTRAL SPECIES		ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Aves	ANCESTRAL SPECIES	9	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Neognathae	ANCESTRAL SPECIES		ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Galloanserae	ANCESTRAL SPECIES	63											ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Anatidae	ANCESTRAL SPECIES	3														ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00940000153837.a.a	ENSGT00940000162943	ENSGT00960000189320	ENSGT00940000153378.b.a.a.b.a	ENSGT00940000153378.b.a.a.a	ENSGT00940000153378.b.a.a.b.b	ENSGT00940000153378.b.a.b	ENSGT00940000162197	ENSGT01030000235263	ENSGT00940000153378.a.b	ENSGT00390000003914	ENSGT00940000157432.C
Pink-footed goose	MODERN SPECIES	258														NRBP2 (ENSABRG00000002810) #20	PUF60 (ENSABRG00000003137) #21	SCRIB (ENSABRG00000003333) #22	FRMPD1 (ENSABRG00000003906)	TRMT10B (ENSABRG00000003977)	DCAF10 (ENSABRG00000003998)	ENSABRG00000004111	POLR1E (ENSABRG00000004150)	ENSABRG00000004342	ENSABRG00000004420	GRHPR (ENSABRG00000004428)	ZCCHC7 (ENSABRG00000004478)	PAX5 (ENSABRG00000004502)	MELK (ENSABRG00000004530)
Duck	MODERN SPECIES	10													ENSAPLG00000027477 #20	ENSAPLG00000009758 #20	PUF60 (ENSAPLG00000010150) #21	SCRIB (ENSAPLG00000010188) #22	FAM83H (ENSAPLG00000010481) #23	MAPK15 (ENSAPLG00000010530) #24	ENSAPLG00000001712	ENSAPLG00000026435	RHPN1 (ENSAPLG00000011125)	TOP1MT (ENSAPLG00000011149)	ENSAPLG00000030824	ENSAPLG00000010200	ENSAPLG00000018242	ENSAPLG00000010175	ENSAPLG00000010171	LYPD2 (ENSAPLG00000029723)	ENSAPLG00000029154	PSCA (ENSAPLG00000029276)	ARC (ENSAPLG00000001892)
Phasianidae	ANCESTRAL SPECIES	1													ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265	ENSGT00390000003161	ENSGT00390000011521	ENSGT01030000234531.B	ENSGT01030000234722.a.a.a.b.a.a.b.b	ENSGT00390000004681 #29	ENSGT00950000183044.a.b #30	ENSGT00940000154420.C.i #35	ENSGT00950000183014.f.b.a.a #32	ENSGT00940000153456.a #33	ENSGT00940000164912	ENSGT00940000164676	ENSGT00940000167819
Japanese quail	MODERN SPECIES	11										ENSCJPG00005011459	ENSCJPG00005011458	ENSCJPG00005011455	ENSCJPG00005011453 #20	ENSCJPG00005011451 #20	PUF60 (ENSCJPG00005011450) #21	SCRIB (ENSCJPG00005010729) #22	FAM83H (ENSCJPG00005010727) #23	MAPK15 (ENSCJPG00005010726) #24	ENSCJPG00005010725	ARHGAP39 (ENSCJPG00005010721)	ENSCJPG00005010720	ENSCJPG00005010719	RECQL4 (ENSCJPG00005010718)	ENSCJPG00005010717	GFUS (ENSCJPG00005010716) #29	PYCR3 (ENSCJPG00005010715) #30	TIGD5 (ENSCJPG00005010714) #35	EEF1D (ENSCJPG00005010693) #32	NAPRT (ENSCJPG00005010692) #33	ENSCJPG00005010691	ENSCJPG00005010690
Phasianidae_b	ANCESTRAL SPECIES	59													ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25	ENSGT00390000003161	ENSGT00390000011521	ENSGT01030000234531.B
Chicken	MODERN SPECIES	11							ENSGALG00010008236 #13	ENSGALG00010008225	ENSGALG00010008220	ENSGALG00010008498	ENSGALG00010008494	ENSGALG00010008468	NRBP2 (ENSGALG00010010290) #20	ENSGALG00010008382 #20	PUF60 (ENSGALG00010008347) #21	SCRIB (ENSGALG00010008324) #22	FAM83H (ENSGALG00010008282) #23	MAPK15 (ENSGALG00010008279) #24	CCDC166 (ENSGALG00010008270) #25	ENSGALG00010008021	ARHGAP39 (ENSGALG00010008015)	C8orf82 (ENSGALG00010008000)	ENSGALG00010007976	LRRC14 (ENSGALG00010007993)	ENSGALG00010007969	RECQL4 (ENSGALG00010007964)	SHARPIN (ENSGALG00010009570) #9	MAF1 (ENSGALG00010009543) #8	HGH1 (ENSGALG00010009501)	MROH1 (ENSGALG00010009489)	ENSGALG00010009475
Turkey	MODERN SPECIES	22							ENSMGAG00000001265	ENSMGAG00000004952	ENSMGAG00000004967	ENSMGAG00000003551	PTGES3 (ENSMGAG00000001129)	ATP5F1B (ENSMGAG00000001133)	ENSMGAG00000017665	ENSMGAG00000004974	ENSMGAG00000013070 #21	ENSMGAG00000013058 #22	ENSMGAG00000013064 #24	ENSMGAG00000013067 #23	ENSMGAG00000018841	ENSMGAG00000021266	ENSMGAG00000022313	ENSMGAG00000012806	OC90 (ENSMGAG00000012820)	ENSMGAG00000012831	ENSMGAG00000012827	DNAAF11 (ENSMGAG00000012834)	ENSMGAG00000012842	ENSMGAG00000017763	ENSMGAG00000021255	ENSMGAG00000012844	ENSMGAG00000012853
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000158421	ENSGT00940000161897	ENSGT00390000018422	ENSGT00940000156930	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT01030000234601.c.a.a.e	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00530000063557.b
Great tit	MODERN SPECIES	11													NRBP2 (ENSPMJG00000013494) #20	PUF60 (ENSPMJG00000013484) #21	ENSPMJG00000013482	SCRIB (ENSPMJG00000013231) #22	FAM83H (ENSPMJG00000013224) #23	MAPK15 (ENSPMJG00000013222) #24	THUMPD2 (ENSPMJG00000013221)	ENSPMJG00000013220	LRRC14 (ENSPMJG00000013219)	ARHGAP39 (ENSPMJG00000013217)	GFUS (ENSPMJG00000013202) #29	ENSPMJG00000013201	PYCR3 (ENSPMJG00000013200) #30	TIGD5 (ENSPMJG00000013199) #35	ENSPMJG00000013198	EEF1D (ENSPMJG00000013197) #32	NAPRT (ENSPMJG00000013196) #33	ENSPMJG00000013195	ENSPMJG00000013193
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000158421	ENSGT00940000161897	ENSGT00390000018422	ENSGT00940000156930	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT01030000234601.c.a.a.e	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00530000063557.b
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00940000158421	ENSGT00390000018422	ENSGT00940000156930	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT01030000234601.c.a.a.f.a.b	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00960000187265	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00530000063557.b
Medium ground finch	MODERN SPECIES	385															ENSGFOG00000013753	SCRIB (ENSGFOG00000013768) #22	FAM83H (ENSGFOG00000013833) #23	MAPK15 (ENSGFOG00000013836) #24	THUMPD2 (ENSGFOG00000013839)
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000158421	ENSGT00390000018422	ENSGT00940000156930	ENSGT00390000016546	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT01030000234601.c.a.a.f.a.b	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00960000187265	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00530000063557.b
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	50	OPLAH (ENSTGUG00000025928) #13	ENSTGUG00000019564 #14	ENSTGUG00000022409	ENSTGUG00000027839 #14	ENSTGUG00000026737	ENSTGUG00000019227	ENSTGUG00000017032	GRINA (ENSTGUG00000021030) #17	PARP10 (ENSTGUG00000028225) #18	PLEC (ENSTGUG00000004052) #19	ENSTGUG00000029761	ENSTGUG00000024647	ENSTGUG00000022104 #20	ENSTGUG00000027413 #21	ENSTGUG00000022116	ENSTGUG00000019102 #22	ENSTGUG00000023112	ENSTGUG00000019780 #23	ENSTGUG00000028724 #24	THUMPD2 (ENSTGUG00000026182)	ENSTGUG00000012787 #24	ENSTGUG00000012789 #23	ENSTGUG00000023273	ENSTGUG00000012791 #22	ENSTGUG00000021763	ENSTGUG00000028900	ENSTGUG00000012797 #21	ENSTGUG00000019716 #20	ENSTGUG00000020894	ENSTGUG00000020238
Zebra finch	MODERN SPECIES	50										ENSTGUG00000020238	ENSTGUG00000020894	ENSTGUG00000019716 #20	ENSTGUG00000012797 #21	ENSTGUG00000028900	ENSTGUG00000021763	ENSTGUG00000012791 #22	ENSTGUG00000023273	ENSTGUG00000012789 #23	ENSTGUG00000012787 #24	THUMPD2 (ENSTGUG00000026182)	ENSTGUG00000028724 #24	ENSTGUG00000019780 #23	ENSTGUG00000023112	ENSTGUG00000019102 #22	ENSTGUG00000022116	ENSTGUG00000027413 #21	ENSTGUG00000022104 #20	ENSTGUG00000024647	ENSTGUG00000029761	PLEC (ENSTGUG00000004052) #19	PARP10 (ENSTGUG00000028225) #18
Common canary	MODERN SPECIES													ENSSCAG00000000002 #20	PUF60 (ENSSCAG00000000012) #21	ENSSCAG00000000013	ENSSCAG00000000015	SCRIB (ENSSCAG00000000022) #22	FAM83H (ENSSCAG00000000027) #23	MAPK15 (ENSSCAG00000000028) #24	THUMPD2 (ENSSCAG00000000031)	ARHGAP39 (ENSSCAG00000000048)	ENSSCAG00000000055	GFUS (ENSSCAG00000000063) #29	ENSSCAG00000000069	PYCR3 (ENSSCAG00000000072) #30	TIGD5 (ENSSCAG00000000074) #35	EEF1D (ENSSCAG00000000077) #32	NAPRT (ENSSCAG00000000080) #33	ENSSCAG00000000087	ENSSCAG00000000097	ZC3H3 (ENSSCAG00000000136) #36	MAFA (ENSSCAG00000000176) #37
Flycatcher	MODERN SPECIES	11	CPNE3 (ENSFALG00000005063)	RMDN1 (ENSFALG00000005037)	WWP1 (ENSFALG00000004950)	ATP6V0D2 (ENSFALG00000004925)	CA2 (ENSFALG00000004923)	ENSFALG00000004920	ENSFALG00000004918	ENSFALG00000004915	CA13 (ENSFALG00000023078)	E2F5 (ENSFALG00000004897)	LRRCC1 (ENSFALG00000004872)	ENSFALG00000027327	ENSFALG00000004842	ENSFALG00000024076	ENSFALG00000008675	SCRIB (ENSFALG00000008670) #22	ENSFALG00000008669 #23	MAPK15 (ENSFALG00000008664) #24	ENSFALG00000008655	ENSFALG00000023689	ENSFALG00000008649	ENSFALG00000029009	RALYL (ENSFALG00000008647)	SNX16 (ENSFALG00000008642)	CHMP4C (ENSFALG00000008640)	ZFAND1 (ENSFALG00000027451)	IMPA1 (ENSFALG00000008635)	FABP4 (ENSFALG00000008633)	PMP2 (ENSFALG00000008632)	FABP5 (ENSFALG00000008631)	ENSFALG00000029070
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT00520000055666.a #15	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000177120	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Kakapo	MODERN SPECIES		HGH1 (ENSSHBG00005001163)	MAF1 (ENSSHBG00005001162) #8	ENSSHBG00005001161 #9	CYC1 (ENSSHBG00005001160) #10	GPAA1 (ENSSHBG00005001159) #11	GRINA (ENSSHBG00005001158) #17	ENSSHBG00005001157 #15	ENSSHBG00005001156 #14	EXOSC4 (ENSSHBG00005001153) #12	PLEC (ENSSHBG00005001152) #19	ENSSHBG00005001151	EPPK1 (ENSSHBG00005001150)	ENSSHBG00005001148 #20	ENSSHBG00005001147 #20	PUF60 (ENSSHBG00005001145) #21	SCRIB (ENSSHBG00005001144) #22	FAM83H (ENSSHBG00005000640) #23	MAPK15 (ENSSHBG00005000639) #24
Golden eagle	MODERN SPECIES	20	ENSACCG00020003280 #9	CYC1 (ENSACCG00020003269) #10	GPAA1 (ENSACCG00020003193) #11	EXOSC4 (ENSACCG00020003176) #12	OPLAH (ENSACCG00020003056) #13	ENSACCG00020002963 #14	ENSACCG00020002948 #15	GRINA (ENSACCG00020002933) #17	ENSACCG00020002915 #18	PLEC (ENSACCG00020002527) #19	ENSACCG00020001916	ENSACCG00020001893	ENSACCG00020001873	NRBP2 (ENSACCG00020001837) #20	PUF60 (ENSACCG00020001805) #21	SCRIB (ENSACCG00020001629) #22	ENSACCG00020001526 #23	MAPK15 (ENSACCG00020001503) #24	ENSACCG00020001487 #25
African ostrich	MODERN SPECIES	500													ENSSCUG00000004568	NRBP2 (ENSSCUG00000004546) #20	PUF60 (ENSSCUG00000004537) #21	SCRIB (ENSSCUG00000004457) #22	FAM83H (ENSSCUG00000004446) #23	MAPK15 (ENSSCUG00000004444) #24
Australian saltwater crocodile	MODERN SPECIES															NRBP2 (ENSCPRG00005014086) #20	PUF60 (ENSCPRG00005014081) #21	SCRIB (ENSCPRG00005013928) #22	IQANK1 (ENSCPRG00005013891)	ENSCPRG00005013887	FAM83H (ENSCPRG00005013885) #23	MAPK15 (ENSCPRG00005013882) #24	GFUS (ENSCPRG00005013872) #29	PYCR3 (ENSCPRG00005013853) #30	TIGD5 (ENSCPRG00005013842) #35	EEF1D (ENSCPRG00005013838) #32	NAPRT (ENSCPRG00005013828) #33	ENSCPRG00005013822	ENSCPRG00005013802	ZC3H3 (ENSCPRG00005013784) #36	RHPN1 (ENSCPRG00005013749)	TOP1MT (ENSCPRG00005013706)	ENSCPRG00005013701
Cryptodira	ANCESTRAL SPECIES	77	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000159045 #19	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00940000154427.B #25
Testudinoidea	ANCESTRAL SPECIES	16	ENSGT00940000163397	ENSGT00390000006896 #8	ENSGT00940000161574 #9	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a #14	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000159045 #19	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265
Testudinidae	ANCESTRAL SPECIES	45	ENSGT00390000012445 #10	ENSGT00390000013685 #11	ENSGT00940000153348.B #12	ENSGT00390000013463 #13	ENSGT00400000022168.a.o #14	ENSGT00400000022168.a.p #14	ENSGT01050000244890.a.a.a #17	ENSGT00940000162035 #18	ENSGT01030000238911	ENSGT00940000159045 #19	ENSGT00940000155008.C	ENSGT00940000166468	ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24	ENSGT00960000187265
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005001999 #14	ENSGEVG00005002053 #14	GRINA (ENSGEVG00005002091) #17	PARP10 (ENSGEVG00005002122) #18	PLEC (ENSGEVG00005002239) #19	ENSGEVG00005002407	ENSGEVG00005002413	ENSGEVG00005002429	ENSGEVG00005002444	ENSGEVG00005002457	EPPK1 (ENSGEVG00005002488)	NRBP2 (ENSGEVG00005002538) #20	ENSGEVG00005002573	PUF60 (ENSGEVG00005002590) #21	ENSGEVG00005002613	SCRIB (ENSGEVG00005002688) #22	IQANK1 (ENSGEVG00005002893)	ENSGEVG00005002908 #23	MAPK15 (ENSGEVG00005002923) #24	ENSGEVG00005002936
Abingdon island giant tortoise	MODERN SPECIES	2396															PUF60 (ENSCABG00000022598) #21	SCRIB (ENSCABG00000022589) #22	ASAP1 (ENSCABG00000022585)	ENSCABG00000022584	CYRIB (ENSCABG00000022583)
Emydidae	ANCESTRAL SPECIES	141												ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000159045 #19	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00390000010763	ENSGT00940000159342 #23	ENSGT00940000159758 #24
painted turtle	MODERN SPECIES	1020												ENSCPBG00000005506	EPPK1 (ENSCPBG00000005553)	NRBP2 (ENSCPBG00000005571) #20	PUF60 (ENSCPBG00000005595) #21	SCRIB (ENSCPBG00000005839) #22	IQANK1 (ENSCPBG00000006314)	FAM83H (ENSCPBG00000006321) #23
Chinese turtle	MODERN SPECIES	1492															PUF60 (ENSPSIG00000004679) #21	SCRIB (ENSPSIG00000017530) #22
Anura	ANCESTRAL SPECIES	312													ENSGT00940000162855.a.b	ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000159342 #23	ENSGT00940000166468	ENSGT00940000159045 #19
Frog	MODERN SPECIES	6	ENSXETG00000048757	ENSXETG00000044661	ENSXETG00000047895	scrt2 (ENSXETG00000044276)	ENSXETG00000037871	ENSXETG00000047128	ENSXETG00000044853	dgat1 (ENSXETG00000001450)	eppk1 (ENSXETG00000048472)	ENSXETG00000044086	XB5798854 [provisional] (ENSXETG00000006924)	arhgap39 (ENSXETG00000040570)	puf60 (ENSXETG00000012469) #20	ENSXETG00000047688	ENSXETG00000045798	scrib (ENSXETG00000012468) #22	ENSXETG00000046432	fam83h (ENSXETG00000005283) #23	ENSXETG00000005286	cyp2c8l (ENSXETG00000005288)	ENSXETG00000035377	ENSXETG00000046263	plec (ENSXETG00000045827) #19	ENSXETG00000049440	XB5919442 [provisional] (ENSXETG00000044923)	lrrc24 (ENSXETG00000014032)	ENSXETG00000045669	ENSXETG00000043224	gfus (ENSXETG00000047541) #29	XB5884357 [provisional] (ENSXETG00000033628)	ENSXETG00000047953
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000023715	ENSLLEG00000023195	ENSLLEG00000023155	PPP1R16A (ENSLLEG00000023059)	ENSLLEG00000022373	ENSLLEG00000022138	ENSLLEG00000022056	PLEC (ENSLLEG00000020998) #19	ENSLLEG00000020892	ENSLLEG00000020872	ENSLLEG00000020645	ENSLLEG00000020619	NRBP2 (ENSLLEG00000020341) #20	ENSLLEG00000020273	PUF60 (ENSLLEG00000019639) #21	SCRIB (ENSLLEG00000019136) #22	ENSLLEG00000019047 #23	ENSLLEG00000019017	ENSLLEG00000018930	ENSLLEG00000018901	ENSLLEG00000018865	ENSLLEG00000018569	ENSLLEG00000018380	ENSLLEG00000018045	ENSLLEG00000017973	ENSLLEG00000017921	ENSLLEG00000017800	ENSLLEG00000017725	ENSLLEG00000017577	ENSLLEG00000017524	ENSLLEG00000017501
Actinopterygii	ANCESTRAL SPECIES	537														ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000157026
Neopterygii	ANCESTRAL SPECIES	437														ENSGT00940000160430 #20	ENSGT00940000155594 #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000157026
Osteoglossocephalai	ANCESTRAL SPECIES	58	ENSGT00390000009802.b	ENSGT00390000012189	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b	ENSGT00940000158547.d	ENSGT00390000014069.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT00930000151367	ENSGT01030000234667.a.a.b.e	ENSGT00940000159862.a	ENSGT00940000155925	ENSGT00940000155562	ENSGT00910000144592	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	143					ENSGT00940000158945.n	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT01050000244890.a.b.b.d ##17	ENSGT00390000009194	ENSGT00940000158259.a	ENSGT00940000165754.b	ENSGT01030000234607.A.a.a.b	ENSGT00400000024709.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.a #21	ENSGT00940000154025.a.e #22	ENSGT00940000157026	ENSGT00390000000805.kb	ENSGT00940000159820	ENSGT00940000167546	ENSGT00390000017582.f	ENSGT00390000016415.a	ENSGT00930000151367	ENSGT01030000234667.a.a.b.f	ENSGT00940000155925.a.b	ENSGT00940000155562	ENSGT00910000144592	ENSGT00390000009209.s	ENSGT01100000263502.B.a.a.c	ENSGT00930000151022.b	ENSGT00390000006522.a.b
Asian bonytongue	MODERN SPECIES	22	asap1a (ENSSFOG00015019834)	tmub1 (ENSSFOG00015019780)	ENSSFOG00015019771	SMARCD3 (ENSSFOG00015019729)	CHPF2 (ENSSFOG00015029646)	abcf2a (ENSSFOG00015019666)	ENSSFOG00015019656	faim2a (ENSSFOG00015028784) ##17	ttc19 (ENSSFOG00015019618)	slc4a2a (ENSSFOG00015019548)	ubtfl (ENSSFOG00015019492)	fastk (ENSSFOG00015019472)	ENSSFOG00015019469	NRBP2 (ENSSFOG00015019418) #20	puf60a (ENSSFOG00015019619) #21	SCRIB (ENSSFOG00015019152) #22	klhl18 (ENSSFOG00015019082)	cdv3 (ENSSFOG00015019063)	bfsp2 (ENSSFOG00015019046)	ENSSFOG00015019026	DNAJC13 (ENSSFOG00015018764)	LZTFL1 (ENSSFOG00015018697)	zgc:136930 (ENSSFOG00015018665)	ccr9a (ENSSFOG00015018658)	gli3 (ENSSFOG00015018628)	prpf4bb (ENSSFOG00015018473)	ENSSFOG00015018456	PXDC1 (ENSSFOG00015018445)	opn4.1 (ENSSFOG00015018440)	tmx3a (ENSSFOG00015018423)	ENSSFOG00015018413
P. kingsleyae	MODERN SPECIES	468									TMEM200C (ENSPKIG00000004470)	ENSPKIG00000004437	ENSPKIG00000004413	zbtb14 (ENSPKIG00000004399)	ENSPKIG00000004388	NRBP2 (ENSPKIG00000004355) #20	puf60a (ENSPKIG00000004295) #21	SCRIB (ENSPKIG00000004142) #22	klhl18 (ENSPKIG00000004058)	cdv3 (ENSPKIG00000004026)	bfsp2 (ENSPKIG00000004002)	ENSPKIG00000003980	ENSPKIG00000003965	zgc:136930 (ENSPKIG00000003939)	ccr9a (ENSPKIG00000003909)	prpf4bb (ENSPKIG00000003877)	ENSPKIG00000003854	PXDC1 (ENSPKIG00000003821)	tmx3a (ENSPKIG00000003761)	ENSPKIG00000003727	ENSPKIG00000003710
Osteoglossiformes	ANCESTRAL SPECIES	77				ENSGT00390000012189.b	ENSGT00940000155285.b.j.a.a	ENSGT00390000015159.b.c	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945.m	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00940000165754.a	ENSGT00400000024709.a	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a.f #22	ENSGT00940000158533	ENSGT00390000000805.lb	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582.e	ENSGT00390000016415.b	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925.a.a	ENSGT00390000009209.t	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.c.lb.a	ENSGT00660000095569.c
P. kingsleyae	MODERN SPECIES	278	dph2 (ENSPKIG00000013375)	zgc:153738 (ENSPKIG00000013334)	guk1b (ENSPKIG00000013068)	garem (ENSPKIG00000012920)	LMO4 (ENSPKIG00000012893)	kyat3.2 (ENSPKIG00000012863)	lrrc8db (ENSPKIG00000012844)	LRRC8C (ENSPKIG00000012817)	barhl2 (ENSPKIG00000012771)	tgfbr3 (ENSPKIG00000012698)	PRKDC (ENSPKIG00000012565)	SZT2 (ENSPKIG00000012435)	ENSPKIG00000012385	nrbp2b (ENSPKIG00000012299) #20	puf60b (ENSPKIG00000012204) #21	scrib (ENSPKIG00000011792) #22	KIF9 (ENSPKIG00000011678)	cdv3 (ENSPKIG00000011652)	ENSPKIG00000011627	topbp1 (ENSPKIG00000011486)	DNAJC13 (ENSPKIG00000011342)	ENSPKIG00000011303
Asian bonytongue	MODERN SPECIES	20	ENSSFOG00015025860	MYC (ENSSFOG00015018992)	CYRIB (ENSSFOG00015019017)	eef1a1l3 (ENSSFOG00015019070)	ASAP1 (ENSSFOG00015019113)	NFX1 (ENSSFOG00015019271)	SMARCD3 (ENSSFOG00015019316)	CHPF2 (ENSSFOG00015033165)	abcf2b (ENSSFOG00015019373)	ENSSFOG00015019423	slc4a2b (ENSSFOG00015019490)	ubtfl (ENSSFOG00015019524)	ENSSFOG00015032739	NRBP2 (ENSSFOG00015019564) #20	puf60b (ENSSFOG00015019371) #21	scrib (ENSSFOG00015019872) #22	KIF9 (ENSSFOG00015019977)	topbp1 (ENSSFOG00015020018)	ENSSFOG00015020047	DNAJC13 (ENSSFOG00015020079)	lztfl1 (ENSSFOG00015020167)	ENSSFOG00015020188	CCR9 (ENSSFOG00015020182)	gli3 (ENSSFOG00015026553)	PXDC1 (ENSSFOG00015020261)	TMX3 (ENSSFOG00015029330)	DSEL (ENSSFOG00015020294)	ENSSFOG00015020298	CDH7 (ENSSFOG00015020309)	IMPA1 (ENSSFOG00015020355)	zgc:111976 (ENSSFOG00015020371)
Clupeocephala	ANCESTRAL SPECIES	150	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT01050000244890.a.b.b.d ##17	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Euteleosteomorpha	ANCESTRAL SPECIES	31	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Protacanthopterygii	ANCESTRAL SPECIES	49	ENSGT00940000178871	ENSGT00940000157762	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00390000009802.b	ENSGT00390000012189.c.b	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209.g.a	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	87	ENSGT00940000165526	ENSGT00940000158547.c.c.b	ENSGT00940000156325.o	ENSGT00940000158945.s	ENSGT01050000244857.B.a.a	ENSGT00630000089910.t	ENSGT00400000022514.g	ENSGT00940000158259.b.g	ENSGT00400000024709.k.b	ENSGT00400000024709.l	ENSGT00390000004989.a.b	ENSGT00390000004989.a.a.a.b.b	ENSGT00390000004989.a.a.a.a.a	ENSGT00940000160430.nb.b #20	ENSGT00940000155594.c.b.b #21	ENSGT00940000154025.a.g #22	ENSGT00940000158533	ENSGT00390000000805.gb	ENSGT00390000000626.f	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b	ENSGT00940000178827	ENSGT00940000157001.e	ENSGT00390000017582.g	ENSGT00940000162064.m.a.a.b	ENSGT00390000016415.c	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e.c	ENSGT00940000155925.j.a.a	ENSGT00940000155562.l.b.c.b.a	ENSGT00390000009209.g.b	ENSGT00940000155562.l.b.c.b.b
Salmoninae_a	ANCESTRAL SPECIES	35	ENSGT00940000165526	ENSGT00940000158547.c.c.b	ENSGT00940000156325.o	ENSGT00940000158945.s	ENSGT01050000244857.B.a.a	ENSGT00630000089910.t	ENSGT00400000022514.g	ENSGT00940000158259.b.g	ENSGT00400000024709.k.b	ENSGT00400000024709.l	ENSGT00390000004989.a.b	ENSGT00390000004989.a.a.a.b.b	ENSGT00390000004989.a.a.a.a.a	ENSGT00940000160430.nb.b #20	ENSGT00940000155594.c.b.b #21	ENSGT00940000154025.a.g #22	ENSGT00940000158533	ENSGT00390000000805.gb	ENSGT00390000000626.f	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b	ENSGT00940000178827	ENSGT00940000157001.e	ENSGT00390000017582.g	ENSGT00940000162064.m.a.a.b	ENSGT00390000016415.c	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e.c	ENSGT00940000155925.j.a.a	ENSGT00940000155562.l.b.c.b.a	ENSGT00390000009209.g.a	ENSGT00930000151022.a
Salmo	ANCESTRAL SPECIES	34	ENSGT00940000165526	ENSGT00940000158547.c.c.b	ENSGT00940000156325.o	ENSGT00940000158945.s	ENSGT01050000244857.B.a.a	ENSGT00630000089910.t	ENSGT00400000022514.g	ENSGT00940000158259.b.g	ENSGT00400000024709.k.b	ENSGT00400000024709.l	ENSGT00390000004989.a.b	ENSGT00390000004989.a.a.a.b.b	ENSGT00390000004989.a.a.a.a.a	ENSGT00940000160430.nb.b #20	ENSGT00940000155594.c.b.b #21	ENSGT00940000154025.a.g #22	ENSGT00940000158533	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.a.b	ENSGT00390000000805.gb	ENSGT00940000178827	ENSGT00940000157001.e	ENSGT00390000017582.g	ENSGT00940000162064.m.a.a.b	ENSGT00390000016415.c	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e.c	ENSGT00940000155925.j.a.a	ENSGT00940000155562.l.b.c.a	ENSGT00390000009209.g.a	ENSGT00930000151022.a	ENSGT00390000006522.a.a.i
Atlantic salmon	MODERN SPECIES	21	ASAP1 (ENSSSAG00000010357)	ENSSSAG00000019408	SMARCD3 (ENSSSAG00000055452)	ENSSSAG00000043047	ABCF2 (ENSSSAG00000043073)	ENSSSAG00000043845	slc4a2b (ENSSSAG00000044249)	ENSSSAG00000107452	ENSSSAG00000062948	ENSSSAG00000062970	ENSSSAG00000062966	ENSSSAG00000062953	nrbp2b (ENSSSAG00000062977) #20	ENSSSAG00000063063 #21	ENSSSAG00000115829	SCRIB (ENSSSAG00000063357) #22	ENSSSAG00000064912	ENSSSAG00000064947	ENSSSAG00000091129	ENSSSAG00000064895	ENSSSAG00000064979	ENSSSAG00000065555	ENSSSAG00000070169	ENSSSAG00000070163	ENSSSAG00000072881	ENSSSAG00000070213	ENSSSAG00000070531	ENSSSAG00000115484	ENSSSAG00000071215	ENSSSAG00000071258	ENSSSAG00000071284
River trout	MODERN SPECIES	36	eef1a1l3 (ENSSTUG00000035575)	ASAP1 (ENSSTUG00000034397)	NFX1 (ENSSTUG00000033623)	smarcd3b (ENSSTUG00000031852)	CHPF2 (ENSSTUG00000031785)	ABCF2 (ENSSTUG00000031241)	ENSSTUG00000031187	slc4a2b (ENSSTUG00000028981)	ENSSTUG00000028898	ENSSTUG00000028887	ENSSTUG00000028872	ENSSTUG00000028861	ENSSTUG00000028857	nrbp2b (ENSSTUG00000028689) #20	puf60b (ENSSTUG00000026887) #21	ENSSTUG00000026842 #22	ENSSTUG00000026839	KIF9 (ENSSTUG00000026794)	cdv3 (ENSSTUG00000026780)	ENSSTUG00000026777	topbp1 (ENSSTUG00000026532)	DNAJC13 (ENSSTUG00000026438)	ENSSTUG00000026410	lztfl1 (ENSSTUG00000026375)	ENSSTUG00000026332	CCR9 (ENSSTUG00000026324)	gli3 (ENSSTUG00000025961)	prpf4bb (ENSSTUG00000024518)	PXDC1 (ENSSTUG00000024473)	TMX3 (ENSSTUG00000024373)	DSEL (ENSSTUG00000024364)
Oncorhynchus	ANCESTRAL SPECIES	27	ENSGT00940000155285.b.j.a.b.i	ENSGT00390000015159.b.a.c	ENSGT00940000165526	ENSGT00940000158547.c.c.b	ENSGT00940000156325.o	ENSGT00940000158945.s	ENSGT01050000244857.B.a.a	ENSGT00630000089910.t	ENSGT00400000022514.g	ENSGT00940000158259.b.g	ENSGT00400000024709.k.b	ENSGT00400000024709.l	ENSGT00390000004989.a.a.a.a.a	ENSGT00940000160430.nb.b #20	ENSGT00940000155594.c.b.b #21	ENSGT00940000154025.a.g #22	ENSGT00940000158533	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b	ENSGT00390000000805.gb	ENSGT00390000000626.f	ENSGT00940000157001.e	ENSGT00390000017582.g	ENSGT00940000162064.m.a.a.b	ENSGT00390000016415.c	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e.c	ENSGT00940000155925.j.a.a	ENSGT00940000155562.l.b.c.b.a	ENSGT00390000009209.g.a	ENSGT00930000151022.a	ENSGT00390000006522.a.a.i
Oncorhynchus_a	ANCESTRAL SPECIES	27	ENSGT00940000155285.b.j.a.b.i	ENSGT00390000015159.b.a.c	ENSGT00940000165526	ENSGT00940000158547.c.c.b	ENSGT00940000156325.o	ENSGT00940000158945.s	ENSGT01050000244857.B.a.a	ENSGT00630000089910.t	ENSGT00400000022514.g	ENSGT00940000158259.b.g	ENSGT00400000024709.k.b	ENSGT00400000024709.l	ENSGT00390000004989.a.a.a.a.a	ENSGT00940000160430.nb.b #20	ENSGT00940000155594.c.b.b #21	ENSGT00940000154025.a.g #22	ENSGT00940000158533	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.a.b	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b	ENSGT00390000000805.gb	ENSGT00390000000626.f	ENSGT00940000157001.e	ENSGT00390000017582.g	ENSGT00940000162064.m.a.a.b	ENSGT00390000016415.c	ENSGT00930000151367.d.b	ENSGT01030000234667.a.a.b.e.c	ENSGT00940000155925.j.a.a	ENSGT00940000155562.l.b.c.b.a	ENSGT00390000009209.g.b	ENSGT00940000155562.l.b.c.b.b
Chinook salmon	MODERN SPECIES	21	myca (ENSOTSG00005022243)	fam49bb (ENSOTSG00005022060)	eef1a1l3 (ENSOTSG00005022020)	ASAP1 (ENSOTSG00005017604)	NFX1 (ENSOTSG00005015411)	smarcd3b (ENSOTSG00005012296)	CHPF2 (ENSOTSG00005012247)	ABCF2 (ENSOTSG00005012205)	ENSOTSG00005012202	slc4a2b (ENSOTSG00005009503)	ENSOTSG00005009496	ENSOTSG00005009495	ENSOTSG00005009494	nrbp2b (ENSOTSG00005009489) #20	puf60b (ENSOTSG00005008450) #21	scrib (ENSOTSG00005008443) #22	KIF9 (ENSOTSG00005008233)	ENSOTSG00005008225	ENSOTSG00005008223	ENSOTSG00005008222	ENSOTSG00005008221	topbp1 (ENSOTSG00005008141)	DNAJC13 (ENSOTSG00005008133)	ENSOTSG00005008132	lztfl1 (ENSOTSG00005008131)	ENSOTSG00005008129	CCR9 (ENSOTSG00005008128)	gli3 (ENSOTSG00005008126)	prpf4bb (ENSOTSG00005006584)	PXDC1 (ENSOTSG00005006576)	TMX3 (ENSOTSG00005005001)
Coho salmon	MODERN SPECIES	2	eef1a1l3 (ENSOKIG00005047969)	ASAP1 (ENSOKIG00005048013)	NFX1 (ENSOKIG00005048224)	smarcd3b (ENSOKIG00005048525)	CHPF2 (ENSOKIG00005048981)	ABCF2 (ENSOKIG00005048988)	ENSOKIG00005049036	slc4a2b (ENSOKIG00005049083)	ENSOKIG00005049224	ENSOKIG00005049226	ENSOKIG00005001954	ENSOKIG00005001978	ENSOKIG00005001983	nrbp2b (ENSOKIG00005002054) #20	puf60b (ENSOKIG00005002382) #21	scrib (ENSOKIG00005003041) #22	KIF9 (ENSOKIG00005003313)	ENSOKIG00005003334	ENSOKIG00005003339	cdv3 (ENSOKIG00005003342)	ENSOKIG00005003351	topbp1 (ENSOKIG00005003386)	DNAJC13 (ENSOKIG00005003460)	LZTFL1 (ENSOKIG00005003574)	ENSOKIG00005003601	ENSOKIG00005003608	gli3 (ENSOKIG00005003639)	PRPF4B (ENSOKIG00005003699)	TMX3 (ENSOKIG00005004211)	DSEL (ENSOKIG00005004376)	ENSOKIG00005004389
Rainbow trout	MODERN SPECIES	6	fam49bb (ENSOMYG00000020029)	eef1a1l3 (ENSOMYG00000019971)	ASAP1 (ENSOMYG00000019682)	ENSOMYG00000018575	SMARCD3 (ENSOMYG00000018283)	ENSOMYG00000018258	ABCF2 (ENSOMYG00000018102)	ENSOMYG00000018068	slc4a2b (ENSOMYG00000014427)	ENSOMYG00000014135	ENSOMYG00000014126	ENSOMYG00000014121	ENSOMYG00000051286	nrbp2b (ENSOMYG00000014017) #20	ENSOMYG00000013710 #21	SCRIB (ENSOMYG00000013552) #22	ENSOMYG00000013386	ENSOMYG00000013331	ENSOMYG00000013325	cdv3 (ENSOMYG00000013321)	ENSOMYG00000013303	topbp1 (ENSOMYG00000013261)	ENSOMYG00000013078	ENSOMYG00000012970	ENSOMYG00000012957	ENSOMYG00000012931	ENSOMYG00000012897	ENSOMYG00000011817	ENSOMYG00000057533	TMX3 (ENSOMYG00000010402)	ENSOMYG00000009961
Huchen	MODERN SPECIES	627	ENSHHUG00000029925	NFX1 (ENSHHUG00000029929)	smarcd3b (ENSHHUG00000029946)	CHPF2 (ENSHHUG00000029983)	ABCF2 (ENSHHUG00000029987)	ENSHHUG00000030158	slc4a2b (ENSHHUG00000030175)	ENSHHUG00000030417	ENSHHUG00000030420	ENSHHUG00000030428	ENSHHUG00000030438	ENSHHUG00000030445	nrbp2b (ENSHHUG00000030454) #20	ENSHHUG00000030467	puf60b (ENSHHUG00000030471) #21	scrib (ENSHHUG00000030490) #22	KIF9 (ENSHHUG00000030713)	ENSHHUG00000030725	cdv3 (ENSHHUG00000030728)	ENSHHUG00000030732
Salmoninae	ANCESTRAL SPECIES	509					ENSGT00940000158547.c.d	ENSGT01060000248676.a.b	ENSGT00940000156325.p	ENSGT00940000158945.t	ENSGT01050000244857.B.a.b	ENSGT00400000022514.h	ENSGT00940000158259.b.h	ENSGT00400000024709.k.a	ENSGT00390000004989.a.a.a.a.b	ENSGT00940000160430.nb.a #20	ENSGT00940000155594.c.b.a #21	ENSGT00940000154025.a.h #22	ENSGT00390000000805.hb	ENSGT00390000000626.e	ENSGT00940000157001.f	ENSGT00390000017582.h	ENSGT00390000016415.d	ENSGT01030000234667.a.a.b.e.d	ENSGT00940000155925.j.a.b	ENSGT00940000155562.l.b.d
Huchen	MODERN SPECIES	142					ENSHHUG00000033686	ENSHHUG00000033702	NFX1 (ENSHHUG00000033710)	smarcd3b (ENSHHUG00000033731)	CHPF2 (ENSHHUG00000033774)	ENSHHUG00000033778	slc4a2b (ENSHHUG00000033794)	ENSHHUG00000033911	ENSHHUG00000033923	nrbp2b (ENSHHUG00000033939) #20	puf60b (ENSHHUG00000034036) #21	scrib (ENSHHUG00000034078) #22	ENSHHUG00000023448	cdv3 (ENSHHUG00000023449)	ENSHHUG00000023457	topbp1 (ENSHHUG00000023462)	ENSHHUG00000023504	lztfl1 (ENSHHUG00000023505)	ENSHHUG00000023514	ENSHHUG00000023522	gli3 (ENSHHUG00000023530)	prpf4bb (ENSHHUG00000023541)	PXDC1 (ENSHHUG00000023749)
Salmoninae_a	ANCESTRAL SPECIES	69	ENSGT00940000156175.g	ENSGT00390000009802.b.v	ENSGT00390000012189.c.b.b	ENSGT00940000155285.b.j.a.b.j	ENSGT00390000015159.b.a.d	ENSGT00940000158547.c.c.a	ENSGT00940000156325.p	ENSGT00940000158945.t	ENSGT01050000244857.B.a.b	ENSGT00400000022514.h	ENSGT00940000158259.b.h	ENSGT00400000024709.k.a	ENSGT00390000004989.a.a.a.a.b	ENSGT00940000160430.nb.a #20	ENSGT00940000155594.c.b.a #21	ENSGT00940000154025.a.h #22	ENSGT00390000000805.hb	ENSGT00390000000626.e	ENSGT00940000157001.f	ENSGT00390000017582.h	ENSGT00390000016415.d	ENSGT01030000234667.a.a.b.e.d	ENSGT00940000155925.j.a.b	ENSGT00940000155562.l.b.d	ENSGT00940000157852.a.b	ENSGT00940000154648.a.a.o.b.a	ENSGT00940000154634.c.lb.a	ENSGT00940000157031.k.d	ENSGT00390000006522.a.a.j
Salmo	ANCESTRAL SPECIES	3	ENSGT00390000009802.b.v	ENSGT00390000012189.c.b.b	ENSGT00940000155285.b.j.a.b.j	ENSGT00390000015159.b.a.d	ENSGT00940000158547.c.c.a	ENSGT00940000156325.p	ENSGT00940000158945.t	ENSGT01050000244857.B.a.b	ENSGT00400000022514.h	ENSGT00940000158259.b.h	ENSGT00400000024709.k.a	ENSGT00390000004989.a.a.a.b.a	ENSGT00390000004989.a.a.a.a.b	ENSGT00940000160430.nb.a #20	ENSGT00940000155594.c.b.a #21	ENSGT00940000154025.a.h #22	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b	ENSGT00390000000805.hb	ENSGT00390000000626.e	ENSGT00940000157001.f	ENSGT00390000017582.h	ENSGT00390000016415.d	ENSGT01030000234667.a.a.b.e.d	ENSGT00940000155925.j.a.b	ENSGT00940000155562.l.b.d	ENSGT00940000157852.a.b	ENSGT00940000154648.a.a.o.b.a	ENSGT00940000154634.c.lb.a	ENSGT00940000157031.k.d	ENSGT00390000006522.a.a.j	ENSGT00940000153866.A
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000046398	ENSSSAG00000046483	ankha (ENSSSAG00000046571)	myca (ENSSSAG00000047511)	fam49bb (ENSSSAG00000047533)	ASAP1 (ENSSSAG00000047800)	ENSSSAG00000049638	ENSSSAG00000111194	ENSSSAG00000093002	ENSSSAG00000055547	slc4a2b (ENSSSAG00000055848)	ENSSSAG00000070145	ENSSSAG00000070137	nrbp2b (ENSSSAG00000070181) #20	ENSSSAG00000071208 #21	SCRIB (ENSSSAG00000072098) #22	ENSSSAG00000082621	cdv3 (ENSSSAG00000072389)	ENSSSAG00000072393	topbp1 (ENSSSAG00000072409)	ENSSSAG00000072730	ENSSSAG00000072866	ENSSSAG00000082079	ENSSSAG00000073193	ENSSSAG00000073172	ENSSSAG00000073150	ENSSSAG00000073138	ENSSSAG00000096910	ENSSSAG00000087143	ENSSSAG00000073131	ENSSSAG00000072943
River trout	MODERN SPECIES	11	ankha (ENSSTUG00000021394)	myca (ENSSTUG00000011677)	ENSSTUG00000011690	fam49bb (ENSSTUG00000011699)	ASAP1 (ENSSTUG00000011939)	NFX1 (ENSSTUG00000013484)	smarcd3b (ENSSTUG00000015259)	CHPF2 (ENSSTUG00000015415)	ENSSTUG00000015439	slc4a2b (ENSSTUG00000015584)	ENSSTUG00000016302	ENSSTUG00000016318	ENSSTUG00000016328	nrbp2b (ENSSTUG00000016371) #20	puf60b (ENSSTUG00000016865) #21	scrib (ENSSTUG00000017075) #22	ENSSTUG00000019668	cdv3 (ENSSTUG00000019673)	ENSSTUG00000019677	ENSSTUG00000019697	topbp1 (ENSSTUG00000019714)	ENSSTUG00000020117	lztfl1 (ENSSTUG00000020128)	ENSSTUG00000020319	gli3 (ENSSTUG00000020354)	prpf4bb (ENSSTUG00000020692)	ENSSTUG00000021845	ENSSTUG00000021902	IMPA1 (ENSSTUG00000021932)	CDH7 (ENSSTUG00000021986)	ENSSTUG00000022147
Oncorhynchus	ANCESTRAL SPECIES	28	ENSGT00940000156175.g	ENSGT00390000009802.b.v	ENSGT00390000012189.c.b.b	ENSGT00940000155285.b.j.a.b.j	ENSGT00390000015159.b.a.d	ENSGT00940000158547.c.c.a	ENSGT00940000156325.p	ENSGT00940000158945.t	ENSGT01050000244857.B.a.b	ENSGT00400000022514.h	ENSGT00940000158259.b.h	ENSGT00400000024709.k.a	ENSGT00390000004989.a.a.a.a.b	ENSGT00940000160430.nb.a #20	ENSGT00940000155594.c.b.a #21	ENSGT00940000154025.a.h #22	ENSGT00950000182774.a.a.b.b	ENSGT00390000000805.hb	ENSGT00390000000626.e	ENSGT00390000017582.h	ENSGT00940000162064.m.a.b	ENSGT00390000016415.d	ENSGT01030000234667.a.a.b.e.d	ENSGT00940000155925.j.a.b	ENSGT00940000155562.l.b.d	ENSGT00940000157852.a.b	ENSGT00940000154648.a.a.o.b.a	ENSGT00940000154634.c.lb.a	ENSGT00940000157031.k.d
Oncorhynchus_a	ANCESTRAL SPECIES	23	ENSGT00940000156175.g	ENSGT00390000009802.b.v	ENSGT00390000012189.c.b.b	ENSGT00940000155285.b.j.a.b.j	ENSGT00390000015159.b.a.d	ENSGT00940000158547.c.c.a	ENSGT00940000156325.p	ENSGT00940000158945.t	ENSGT01050000244857.B.a.b	ENSGT00400000022514.h	ENSGT00940000158259.b.h	ENSGT00400000024709.k.a	ENSGT00390000004989.a.a.a.a.b	ENSGT00940000160430.nb.a #20	ENSGT00940000155594.c.b.a #21	ENSGT00940000154025.a.h #22	ENSGT00950000182774.a.a.b.b	ENSGT00390000000805.hb	ENSGT00390000000626.e	ENSGT00390000017582.h	ENSGT00940000162064.m.a.b	ENSGT00390000016415.d	ENSGT01030000234667.a.a.b.e.d	ENSGT00940000155925.j.a.b	ENSGT00940000155562.l.b.d	ENSGT00940000157852.a.b	ENSGT00940000154648.a.a.o.b.a	ENSGT00940000154634.c.lb.a	ENSGT00940000157031.k.d
Coho salmon	MODERN SPECIES	9	POU6F2 (ENSOKIG00005045708)	ENSOKIG00005045689	ankha (ENSOKIG00005045558)	myca (ENSOKIG00005045545)	fam49bb (ENSOKIG00005045509)	ASAP1 (ENSOKIG00005043676)	NFX1 (ENSOKIG00005041130)	SMARCD3 (ENSOKIG00005040785)	CHPF2 (ENSOKIG00005040730)	ENSOKIG00005040547	slc4a2b (ENSOKIG00005039887)	ENSOKIG00005039851	ENSOKIG00005039831	nrbp2b (ENSOKIG00005039768) #20	PUF60 (ENSOKIG00005039738) #21	SCRIB (ENSOKIG00005038303) #22	ENSOKIG00005038218	ENSOKIG00005038210	ENSOKIG00005038196	ENSOKIG00005038112	lztfl1 (ENSOKIG00005037953)	ENSOKIG00005037940	ENSOKIG00005037812	prpf4bb (ENSOKIG00005036853)	ENSOKIG00005036340	ENSOKIG00005036278	IMPA1 (ENSOKIG00005036257)	ENSOKIG00005036251	CDH7 (ENSOKIG00005035963)	ENSOKIG00005035918	ABCG1 (ENSOKIG00005034390)
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005021545	ankha (ENSOTSG00005021549)	myca (ENSOTSG00005021595)	fam49bb (ENSOTSG00005021599)	ASAP1 (ENSOTSG00005021708)	NFX1 (ENSOTSG00005024555)	smarcd3b (ENSOTSG00005025852)	CHPF2 (ENSOTSG00005026209)	ENSOTSG00005026210	slc4a2b (ENSOTSG00005026217)	ENSOTSG00005026758	ENSOTSG00005026759	ENSOTSG00005026760	nrbp2b (ENSOTSG00005026770) #20	puf60b (ENSOTSG00005026773) #21	scrib (ENSOTSG00005026788) #22	ENSOTSG00005036396	cdv3 (ENSOTSG00005036399)	ENSOTSG00005036436	DNAJC13 (ENSOTSG00005036452)	ENSOTSG00005036492	lztfl1 (ENSOTSG00005036538)	ENSOTSG00005036539	gli3 (ENSOTSG00005036541)	prpf4bb (ENSOTSG00005036543)	ENSOTSG00005036548	CDH7 (ENSOTSG00005036552)	IMPA1 (ENSOTSG00005036553)	ENSOTSG00005036554	ENSOTSG00005036556	ENSOTSG00005036557
Rainbow trout	MODERN SPECIES	2	fam49bb (ENSOMYG00000039420)	ASAP1 (ENSOMYG00000039784)	ENSOMYG00000057993	ENSOMYG00000068057	ENSOMYG00000040075	ENSOMYG00000041190	ENSOMYG00000075685	ENSOMYG00000043009	ENSOMYG00000043014	ENSOMYG00000043023	slc4a2b (ENSOMYG00000043198)	ENSOMYG00000044298	ENSOMYG00000044302	nrbp2b (ENSOMYG00000044314) #20	ENSOMYG00000044344 #21	SCRIB (ENSOMYG00000044572) #22	ENSOMYG00000044598	ENSOMYG00000044602	ENSOMYG00000044605	ENSOMYG00000044614	ENSOMYG00000044628	ENSOMYG00000053423	ENSOMYG00000068318	ENSOMYG00000044680	ENSOMYG00000044684	ENSOMYG00000044687	ENSOMYG00000044696	ENSOMYG00000021861	ENSOMYG00000044749	ENSOMYG00000044705	ENSOMYG00000048969
Northern pike	MODERN SPECIES	20	gli3 (ENSELUG00000005226)	CCR9 (ENSELUG00000005254)	ENSELUG00000005275	lztfl1 (ENSELUG00000005297)	ENSELUG00000031791	ENSELUG00000028668	ENSELUG00000005312	ENSELUG00000029367	ENSELUG00000034161	DNAJC13 (ENSELUG00000008383)	topbp1 (ENSELUG00000008446)	ENSELUG00000008474	cdv3 (ENSELUG00000008485)	ENSELUG00000032392	KIF9 (ENSELUG00000008912)	scrib (ENSELUG00000009059) #22	ENSELUG00000027341	ENSELUG00000031157	ENSELUG00000029498	ENSELUG00000026269	ENSELUG00000000972	ENSELUG00000030590	ENSELUG00000025790	ENSELUG00000001718	ENSELUG00000009100	ENSELUG00000021082	ENSELUG00000029057	ENSELUG00000033810	ENSELUG00000024711	ENSELUG00000012621	ENSELUG00000031540
Acanthomorphata	ANCESTRAL SPECIES	17	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Cod	MODERN SPECIES	15	ASAP1 (ENSGMOG00000006138)	ENSGMOG00000006198	SMARCD3 (ENSGMOG00000006227)	ENSGMOG00000006248	ABCF2 (ENSGMOG00000006259)	ENSGMOG00000033454	slc4a2b (ENSGMOG00000006300)	ENSGMOG00000032724	ENSGMOG00000030745	ENSGMOG00000006345	ENSGMOG00000036424	nrbp2b (ENSGMOG00000006362) #20	ENSGMOG00000006392 #21	ENSGMOG00000037063	ENSGMOG00000006430	ENSGMOG00000006464 #22	ENSGMOG00000006532	ENSGMOG00000033944	ENSGMOG00000028505	cdv3 (ENSGMOG00000006565)	ENSGMOG00000030101	topbp1 (ENSGMOG00000006604)	ENSGMOG00000030716	ENSGMOG00000006633	ENSGMOG00000006691	ENSGMOG00000006700	ENSGMOG00000006713	ENSGMOG00000006746	ENSGMOG00000006767	ENSGMOG00000006776	ENSGMOG00000034537
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Pinecone sodierfish	MODERN SPECIES	12	myca (ENSMMDG00005021976)	fam49bb (ENSMMDG00005021576)	eef1a1l3 (ENSMMDG00005021564)	ASAP1 (ENSMMDG00005021188)	NFX1 (ENSMMDG00005020050)	smarcd3b (ENSMMDG00005020016)	CHPF2 (ENSMMDG00005020015)	abcf2a (ENSMMDG00005020012)	ENSMMDG00005020009	slc4a2b (ENSMMDG00005018857)	ENSMMDG00005018835	ENSMMDG00005018834	ENSMMDG00005018832	nrbp2b (ENSMMDG00005018524) #20	puf60b (ENSMMDG00005017582) #21	scrib (ENSMMDG00005017544) #22	KIF9 (ENSMMDG00005017533)	cdv3 (ENSMMDG00005017527)	ENSMMDG00005017526	ENSMMDG00005017525	topbp1 (ENSMMDG00005017504)	DNAJC13 (ENSMMDG00005017424)	lztfl1 (ENSMMDG00005017413)	CCR9 (ENSMMDG00005017409)	gli3 (ENSMMDG00005017396)	prpf4bb (ENSMMDG00005016376)	PXDC1 (ENSMMDG00005016343)	TMX3 (ENSMMDG00005016329)	DSEL (ENSMMDG00005016328)	ENSMMDG00005016324	CDH7 (ENSMMDG00005016223)
Percomorphaceae	ANCESTRAL SPECIES	28	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Tiger tail seahorse	MODERN SPECIES	77	rpl22l1 (ENSHCOG00000015049)	ENSHCOG00000015066	TNIK (ENSHCOG00000015118)	ENSHCOG00000015159	acot9.2 (ENSHCOG00000015275)	sat1b (ENSHCOG00000000423)	ENSHCOG00000015308	klhl15 (ENSHCOG00000015329)	eif2s3 (ENSHCOG00000015356)	ENSHCOG00000015431	slc4a2b (ENSHCOG00000015481)	ENSHCOG00000015493	ENSHCOG00000015499	nrbp2b (ENSHCOG00000015532) #20	puf60b (ENSHCOG00000015541) #21	scrib (ENSHCOG00000015612) #22	cdv3 (ENSHCOG00000015632)	hacd1 (ENSHCOG00000015665)	TMEM236 (ENSHCOG00000015675)	MRC1 (ENSHCOG00000015686)	ENSHCOG00000015699	cacnb2a (ENSHCOG00000015727)	NSUN6 (ENSHCOG00000015758)	arl8 (ENSHCOG00000015779)
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00980000199639	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00980000199639	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Atherinomorphae	ANCESTRAL SPECIES	19	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00980000199639	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Oryzias	ANCESTRAL SPECIES	18	ENSGT00390000012189.c.b	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Oryzias_a	ANCESTRAL SPECIES	16	ENSGT00390000012189.c.b	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Chinese medaka	MODERN SPECIES	71	POU6F2 (ENSOSIG00000016038)	otulina (ENSOSIG00000016039)	OTULIN (ENSOSIG00000016040)	ankha (ENSOSIG00000016043)	myca (ENSOSIG00000016076)	fam49bb (ENSOSIG00000016086)	ASAP1 (ENSOSIG00000016540)	NFX1 (ENSOSIG00000020368)	smarcd3b (ENSOSIG00000020499)	CHPF2 (ENSOSIG00000020619)	slc4a2b (ENSOSIG00000020668)	ENSOSIG00000021264	ENSOSIG00000021265	ENSOSIG00000021266	nrbp2b (ENSOSIG00000021289) #20	ENSOSIG00000021677 #22	ENSOSIG00000021936	topbp1 (ENSOSIG00000021984)	lztfl1 (ENSOSIG00000022171)	CCR9 (ENSOSIG00000022174)	gli3 (ENSOSIG00000022232)	prpf4bb (ENSOSIG00000022278)	PXDC1 (ENSOSIG00000022311)	TMX3 (ENSOSIG00000022344)	DSEL (ENSOSIG00000022466)
Japanese Medaka HdrR	MODERN SPECIES	12	myca (ENSORLG00000025592)	fam49bb (ENSORLG00000026369)	si:dkey-37o8.1 (ENSORLG00000019066)	ASAP1 (ENSORLG00000029861)	ENSORLG00000027942	NFX1 (ENSORLG00000026662)	smarcd3b (ENSORLG00000011768)	CHPF2 (ENSORLG00000011783)	abcf2a (ENSORLG00000011822)	ENSORLG00000027505	slc4a2b (ENSORLG00000012164)	ENSORLG00000029077	ENSORLG00000012186	nrbp2b (ENSORLG00000012200) #20	puf60b (ENSORLG00000012279) #21	ENSORLG00000012302 #22	cdv3 (ENSORLG00000012313)	ENSORLG00000022317	ENSORLG00000027623	topbp1 (ENSORLG00000012344)	DNAJC13 (ENSORLG00000012388)	lztfl1 (ENSORLG00000012427)	CCR9 (ENSORLG00000027812)	gli3 (ENSORLG00000012490)	prpf4bb (ENSORLG00000012529)	PXDC1 (ENSORLG00000030516)	TMX3 (ENSORLG00000012557)	ENSORLG00000026104	DSEL (ENSORLG00000012566)	ENSORLG00000012613	CDH7 (ENSORLG00000012632)
Oryzias_b	ANCESTRAL SPECIES	16	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT01000000221249	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Indian medaka	MODERN SPECIES	14	ASAP1 (ENSOMEG00000001852)	ENSOMEG00000001829	ENSOMEG00000001822	NFX1 (ENSOMEG00000001814)	ENSOMEG00000001796	smarcd3b (ENSOMEG00000001784)	CHPF2 (ENSOMEG00000001763)	abcf2a (ENSOMEG00000001752)	ENSOMEG00000001734	slc4a2b (ENSOMEG00000001716)	ENSOMEG00000001690	ENSOMEG00000001688	ENSOMEG00000001683	nrbp2b (ENSOMEG00000001675) #20	puf60b (ENSOMEG00000001643) #21	scrib (ENSOMEG00000001582) #22	ENSOMEG00000001575	cdv3 (ENSOMEG00000001568)	ENSOMEG00000001561	topbp1 (ENSOMEG00000001551)	DNAJC13 (ENSOMEG00000001398)	lztfl1 (ENSOMEG00000001260)	CCR9 (ENSOMEG00000001256)	gli3 (ENSOMEG00000001241)	prpf4bb (ENSOMEG00000001222)	PXDC1 (ENSOMEG00000001218)	TMX3 (ENSOMEG00000001215)	ENSOMEG00000001210	ENSOMEG00000001206	DSEL (ENSOMEG00000001204)	ENSOMEG00000001202
Javanese ricefish	MODERN SPECIES	12	myca (ENSOJAG00000011322)	ENSOJAG00000011295	fam49bb (ENSOJAG00000011101)	eef1a1l3 (ENSOJAG00000011062)	ASAP1 (ENSOJAG00000010440)	NFX1 (ENSOJAG00000010141)	smarcd3b (ENSOJAG00000009827)	CHPF2 (ENSOJAG00000009760)	abcf2a (ENSOJAG00000009751)	ENSOJAG00000009694	ENSOJAG00000007873	ENSOJAG00000007863	ENSOJAG00000007822	nrbp2b (ENSOJAG00000007683) #20	puf60b (ENSOJAG00000007188) #21	ENSOJAG00000006995 #22	cdv3 (ENSOJAG00000006983)	ENSOJAG00000006957	topbp1 (ENSOJAG00000006279)	lztfl1 (ENSOJAG00000006134)	CCR9 (ENSOJAG00000006125)	gli3 (ENSOJAG00000005821)	prpf4bb (ENSOJAG00000005313)	PXDC1 (ENSOJAG00000005285)	TMX3 (ENSOJAG00000004482)	DSEL (ENSOJAG00000004293)	ENSOJAG00000004272	CDH7 (ENSOJAG00000004037)	ENSOJAG00000003920	ENSOJAG00000003900	ENSOJAG00000003842
Cyprinodontiformes	ANCESTRAL SPECIES	20	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00980000199639	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Cyprinodontoidei	ANCESTRAL SPECIES	27	ENSGT00940000166818	ENSGT00390000006522.a.a	ENSGT00930000151022.a	ENSGT00390000009209	ENSGT00940000155562.l.b	ENSGT00940000155925	ENSGT01030000234667.a.a.b.e	ENSGT00390000016415	ENSGT00390000017582	ENSGT00940000157001	ENSGT00390000000626	ENSGT00390000000805	ENSGT00390000004989.a.b.x	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000004989.a.b.y	ENSGT00400000024709.j	ENSGT00400000024709.i	ENSGT00940000158259.b	ENSGT00980000199639	ENSGT00400000022514	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945	ENSGT00940000156325	ENSGT01060000248676.a.b	ENSGT00940000158547.c	ENSGT00940000165526	ENSGT00390000015159.b.a	ENSGT00940000155285.b.j.a.b
Poeciliinae	ANCESTRAL SPECIES	20	ENSGT00940000157031.k	ENSGT00940000166818	ENSGT00390000006522.a.a	ENSGT00930000151022.a	ENSGT00390000009209	ENSGT00940000155562.l.b	ENSGT00940000155925	ENSGT01030000234667.a.a.b.e	ENSGT00390000016415	ENSGT00390000017582	ENSGT00940000157001	ENSGT00390000000626	ENSGT00390000000805	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000004989.a.b.y	ENSGT00400000024709.j	ENSGT00400000024709.i	ENSGT00940000158259.b	ENSGT00980000199639	ENSGT00400000022514	ENSGT00630000089910	ENSGT01050000244857.B.a.d	ENSGT00940000158945	ENSGT00940000156325	ENSGT00940000158547.c	ENSGT00940000165526	ENSGT00390000015159.b.a	ENSGT00940000155285.b.j.a.b	ENSGT00390000012189.c.b
Poecilia	ANCESTRAL SPECIES	17	ENSGT00940000157031.k	ENSGT00940000166818	ENSGT00390000006522.a.a	ENSGT00930000151022.a	ENSGT00390000009209	ENSGT00940000155562.l.b	ENSGT00940000155925	ENSGT01030000234667.a.a.b.e	ENSGT00390000016415	ENSGT00390000017582	ENSGT00940000157001	ENSGT00390000000626	ENSGT00390000000805	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000004989.a.b.y	ENSGT00400000024709.j	ENSGT00400000024709.i	ENSGT00940000158259.b	ENSGT00980000199639	ENSGT00400000022514	ENSGT00630000089910	ENSGT01050000244857.B.a.d	ENSGT00940000158945	ENSGT00940000156325	ENSGT00940000158547.c	ENSGT00940000165526	ENSGT00390000015159.b.a	ENSGT00940000155285.b.j.a.b	ENSGT00390000012189.c.b
NAME_6	ANCESTRAL SPECIES	67	ENSGT00940000166818	ENSGT00390000006522.a.a	ENSGT00930000151022.a	ENSGT00390000009209	ENSGT00940000155562.l.b	ENSGT00940000155925	ENSGT01030000234667.a.a.b.e	ENSGT00390000016415	ENSGT00390000017582	ENSGT01070000253760.b.a.a.a.a.b.b.e.a.a.b.a.a.a.a.a.a.a.a	ENSGT00940000157001	ENSGT00390000000626	ENSGT00390000000805	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000004989.a.b.y.b
Amazon molly	MODERN SPECIES	434	DSEL (ENSPFOG00000020569)	TMX3 (ENSPFOG00000019317)	PXDC1 (ENSPFOG00000019311)	prpf4bb (ENSPFOG00000019305)	gli3 (ENSPFOG00000019294)	CCR9 (ENSPFOG00000020568)	lztfl1 (ENSPFOG00000019288)	DNAJC13 (ENSPFOG00000019268)	ENSPFOG00000019248	ENSPFOG00000020567	topbp1 (ENSPFOG00000019240)	ENSPFOG00000023956	cdv3 (ENSPFOG00000019234)	nrbp2b (ENSPFOG00000019225) #20	puf60b (ENSPFOG00000019217) #21	scrib (ENSPFOG00000019196) #22	ENSPFOG00000019191
Sailfin molly	MODERN SPECIES	1934														nrbp2b (ENSPLAG00000010694) #20	puf60b (ENSPLAG00000010754) #21	scrib (ENSPLAG00000010846) #22
Guppy	MODERN SPECIES	451	DSEL (ENSPREG00000002367)	fabp4a (ENSPREG00000002375)	TMX3 (ENSPREG00000002390)	PXDC1 (ENSPREG00000002419)	prpf4bb (ENSPREG00000002446)	ENSPREG00000002565	CCR9 (ENSPREG00000002599)	lztfl1 (ENSPREG00000002617)	DNAJC13 (ENSPREG00000002883)	topbp1 (ENSPREG00000005251)	ENSPREG00000005319	ENSPREG00000005330	cdv3 (ENSPREG00000005348)	nrbp2b (ENSPREG00000005371) #20	puf60b (ENSPREG00000005440) #21	scrib (ENSPREG00000005702) #22	ENSPREG00000005787	ENSPREG00000005844	ENSPREG00000005857	ENSPREG00000005904	ENSPREG00000005941	slc4a2b (ENSPREG00000005968)	ENSPREG00000006028	abcf2a (ENSPREG00000006098)	CHPF2 (ENSPREG00000006154)	smarcd3b (ENSPREG00000006165)	NFX1 (ENSPREG00000006186)	ASAP1 (ENSPREG00000006220)	eef1a1l3 (ENSPREG00000006280)	fam49bb (ENSPREG00000006320)	myca (ENSPREG00000006368)
Platyfish	MODERN SPECIES	13	ENSXMAG00000003058	ENSXMAG00000003114	DSEL (ENSXMAG00000020256)	TMX3 (ENSXMAG00000001749)	PXDC1 (ENSXMAG00000001758)	prpf4bb (ENSXMAG00000001762)	ENSXMAG00000001777	CCR9 (ENSXMAG00000020050)	lztfl1 (ENSXMAG00000001782)	DNAJC13 (ENSXMAG00000001791)	topbp1 (ENSXMAG00000001818)	ENSXMAG00000028398	cdv3 (ENSXMAG00000023660)	nrbp2b (ENSXMAG00000001840) #20	puf60b (ENSXMAG00000001862) #21	scrib (ENSXMAG00000001864) #22	ENSXMAG00000001889	ENSXMAG00000015202	ENSXMAG00000001890	slc4a2b (ENSXMAG00000001894)	ENSXMAG00000001926	abcf2a (ENSXMAG00000001927)	CHPF2 (ENSXMAG00000001943)	smarcd3b (ENSXMAG00000022630)	NFX1 (ENSXMAG00000001963)	ASAP1 (ENSXMAG00000001975)	eef1a1l3 (ENSXMAG00000001998)	fam49bb (ENSXMAG00000026161)	myca (ENSXMAG00000002025)	ankha (ENSXMAG00000002027)	ENSXMAG00000002031
NAME_4	ANCESTRAL SPECIES	192	ENSGT00940000166818	ENSGT00390000006522.a.a	ENSGT00930000151022.a	ENSGT00390000009209	ENSGT00940000155562.l.b	ENSGT00940000155925	ENSGT01030000234667.a.a.b.e	ENSGT00390000016415	ENSGT00390000017582	ENSGT00940000157001	ENSGT00390000000626	ENSGT00390000000805	ENSGT00390000004989.a.b.x	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22
Mummichog	MODERN SPECIES	635										ENSFHEG00000020108	ENSFHEG00000020102	ENSFHEG00000020094	ENSFHEG00000020083	nrbp2b (ENSFHEG00000020066) #20	puf60b (ENSFHEG00000020046) #21	scrib (ENSFHEG00000019982) #22
Sheepshead minnow	MODERN SPECIES	871									CCR9 (ENSCVAG00000013668)	lztfl1 (ENSCVAG00000013657)	DNAJC13 (ENSCVAG00000013572)	topbp1 (ENSCVAG00000009423)	cdv3 (ENSCVAG00000009408)	nrbp2b (ENSCVAG00000000701) #20	puf60b (ENSCVAG00000009386) #21	ENSCVAG00000009360 #22
Aplocheiloidei	ANCESTRAL SPECIES	18	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015015204	CABZ01108997.2 (ENSNFUG00015014801)	PXDC1B (ENSNFUG00015014754)	PRPF4BB (ENSNFUG00015014231)	puf60b (ENSNFUG00015013147) #21	GLI3 (ENSNFUG00015013076)	CCR9 (ENSNFUG00015013060)	ENSNFUG00015013057	lztfl1 (ENSNFUG00015013024)	DNAJC13 (ENSNFUG00015012962)	TOPBP1 (ENSNFUG00015012861)	ENSNFUG00015012852	CDV3 (ENSNFUG00015012846)	ENSNFUG00015012842	nrbp2b (ENSNFUG00015012791) #20	scrib (ENSNFUG00015008631) #22	Nfu_g_1_006903 (ENSNFUG00015008436)	ENSNFUG00015008431	Nfu_g_1_006955 (ENSNFUG00015008429)	OLA.2605 (ENSNFUG00015008426)	ENSNFUG00015008423	SLC4A2B (ENSNFUG00015007822)	ENSNFUG00015007768	CU694221.1 (ENSNFUG00015007762)	abcf2a (ENSNFUG00015007711)	CHPF2 (ENSNFUG00015007700)	smarcd3b (ENSNFUG00015007631)	NFX1 (ENSNFUG00015007270)	ASAP1 (ENSNFUG00015006679)	fam49bb (ENSNFUG00015006616)	eef1a1l3 (ENSNFUG00015006608)
Mangrove rivulus	MODERN SPECIES	7	fam49bb (ENSKMAG00000015874)	eef1a1l3 (ENSKMAG00000015910)	ASAP1 (ENSKMAG00000016018)	NFX1 (ENSKMAG00000016306)	smarcd3b (ENSKMAG00000016357)	CHPF2 (ENSKMAG00000016424)	abcf2a (ENSKMAG00000016453)	ENSKMAG00000016498	slc4a2b (ENSKMAG00000016571)	ENSKMAG00000016662	ENSKMAG00000016670	ENSKMAG00000016686	nrbp2b (ENSKMAG00000016702) #20	ENSKMAG00000016728	puf60b (ENSKMAG00000016745) #21	scrib (ENSKMAG00000016813) #22	cdv3 (ENSKMAG00000016999)	ENSKMAG00000017012	topbp1 (ENSKMAG00000017034)	DNAJC13 (ENSKMAG00000017138)	lztfl1 (ENSKMAG00000017481)	CCR9 (ENSKMAG00000017561)	gli3 (ENSKMAG00000017607)	prpf4bb (ENSKMAG00000017707)	PXDC1 (ENSKMAG00000017737)	TMX3 (ENSKMAG00000017790)	DSEL (ENSKMAG00000017816)	ENSKMAG00000017834	CDH7 (ENSKMAG00000017873)	ENSKMAG00000017923	IMPA1 (ENSKMAG00000017940)
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Cichlidae	ANCESTRAL SPECIES	18	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Midas cichlid	MODERN SPECIES	147	NFX1 (ENSACIG00000021055)	smarcd3b (ENSACIG00000021100)	CHPF2 (ENSACIG00000021194)	abcf2a (ENSACIG00000021213)	ENSACIG00000021237	slc4a2b (ENSACIG00000021326)	ENSACIG00000021582	ENSACIG00000021596	ENSACIG00000021606	ENSACIG00000021610	ENSACIG00000021619	ENSACIG00000021630	ENSACIG00000021663	nrbp2b (ENSACIG00000021670) #20	puf60b (ENSACIG00000021705) #21	scrib (ENSACIG00000021725) #22	cdv3 (ENSACIG00000021781)	ENSACIG00000021803	topbp1 (ENSACIG00000021817)	DNAJC13 (ENSACIG00000021872)	lztfl1 (ENSACIG00000000163)	CCR9 (ENSACIG00000000350)	ENSACIG00000000357	gli3 (ENSACIG00000000367)	prpf4bb (ENSACIG00000000424)	PXDC1 (ENSACIG00000000481)	tmx3b (ENSACIG00000000495)	DSEL (ENSACIG00000000556)	ENSACIG00000000568	CDH7 (ENSACIG00000000711)	ENSACIG00000000754
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j.a.b	ENSGT00400000024709.j.b	ENSGT00390000004989.a.b.bb	ENSGT00390000004989.a.b.ab.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Nile tilapia	MODERN SPECIES	21	smarcd3b (ENSONIG00000006195)	CHPF2 (ENSONIG00000006202)	abcf2a (ENSONIG00000006206)	ENSONIG00000034346	slc4a2b (ENSONIG00000006209)	ENSONIG00000006235	ENSONIG00000028755	ENSONIG00000042395	ENSONIG00000032680	ENSONIG00000040436	ENSONIG00000033585	ENSONIG00000000218	ENSONIG00000006237	nrbp2b (ENSONIG00000036853) #20	puf60b (ENSONIG00000006247) #21	scrib (ENSONIG00000006252) #22	ENSONIG00000031096	cdv3 (ENSONIG00000006262)	ENSONIG00000006265	topbp1 (ENSONIG00000006267)	DNAJC13 (ENSONIG00000006278)	lztfl1 (ENSONIG00000006294)	CCR9 (ENSONIG00000006297)	ENSONIG00000006298	prpf4bb (ENSONIG00000006312)	pxdc1 (ENSONIG00000036890)	TMX3 (ENSONIG00000006323)	DSEL (ENSONIG00000020457)	ENSONIG00000006331	ENSONIG00000038135	CDH7 (ENSONIG00000006338)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j.a.b	ENSGT00400000024709.j.b	ENSGT00400000024709.j.a.a	ENSGT00390000004989.a.b.bb	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Lyretail cichlid	MODERN SPECIES	325	smarcd3b (ENSNBRG00000013417)	CHPF2 (ENSNBRG00000013389)	abcf2a (ENSNBRG00000013377)	ENSNBRG00000013346	slc4a2b (ENSNBRG00000013268)	ENSNBRG00000013262	ENSNBRG00000013255	ENSNBRG00000013242	ENSNBRG00000013234	ENSNBRG00000013226	ENSNBRG00000013211	ENSNBRG00000013204	ENSNBRG00000013181	nrbp2b (ENSNBRG00000013150) #20	puf60b (ENSNBRG00000013047) #21	scrib (ENSNBRG00000012941) #22	cdv3 (ENSNBRG00000012920)	ENSNBRG00000012917	topbp1 (ENSNBRG00000012862)	ENSNBRG00000012857	lztfl1 (ENSNBRG00000012841)	CCR9 (ENSNBRG00000012822)	gli3 (ENSNBRG00000012786)	prpf4bb (ENSNBRG00000012727)	PXDC1 (ENSNBRG00000012708)	TMX3 (ENSNBRG00000012674)	DSEL (ENSNBRG00000012662)	ENSNBRG00000011895	CDH7 (ENSNBRG00000011764)	ENSNBRG00000011742	IMPA1 (ENSNBRG00000011728)
Haplochromini	ANCESTRAL SPECIES	21	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j.a.b	ENSGT00400000024709.j.b	ENSGT00400000024709.j.a.a	ENSGT00390000004989.a.b.bb	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Burton s mouthbrooder	MODERN SPECIES	319	ASAP1 (ENSHBUG00000015490)	ENSHBUG00000015410	NFX1 (ENSHBUG00000015403)	smarcd3b (ENSHBUG00000015370)	CHPF2 (ENSHBUG00000015335)	abcf2a (ENSHBUG00000015296)	ENSHBUG00000015252	slc4a2b (ENSHBUG00000015231)	ENSHBUG00000015172	ENSHBUG00000015169	ENSHBUG00000015164	ENSHBUG00000015152	ENSHBUG00000015149	nrbp2b (ENSHBUG00000000445) #20	puf60b (ENSHBUG00000015118) #21	scrib (ENSHBUG00000015025) #22	cdv3 (ENSHBUG00000014911)	ENSHBUG00000014879	topbp1 (ENSHBUG00000000437)	DNAJC13 (ENSHBUG00000014823)	lztfl1 (ENSHBUG00000014716)	CCR9 (ENSHBUG00000014667)	gli3 (ENSHBUG00000014660)	prpf4bb (ENSHBUG00000014598)	PXDC1 (ENSHBUG00000014588)	TMX3 (ENSHBUG00000001044)	DSEL (ENSHBUG00000014558)	ENSHBUG00000014531	CDH7 (ENSHBUG00000014487)	ENSHBUG00000014462	IMPA1 (ENSHBUG00000014438)
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00940000182574	ENSGT00400000024709.i	ENSGT00400000024709.j.a.b	ENSGT00400000024709.j.b	ENSGT00400000024709.j.a.a	ENSGT00390000004989.a.b.bb	ENSGT00390000004989.a.b.ab.a	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
P. nyererei	MODERN SPECIES	382	ENSPNYG00000002170	NFX1 (ENSPNYG00000002175)	smarcd3b (ENSPNYG00000002187)	CHPF2 (ENSPNYG00000002249)	abcf2a (ENSPNYG00000002263)	ENSPNYG00000002314	slc4a2b (ENSPNYG00000002382)	ENSPNYG00000002404	ENSPNYG00000002424	ENSPNYG00000002429	ENSPNYG00000002438	ENSPNYG00000002454	ENSPNYG00000002464	nrbp2b (ENSPNYG00000002484) #20	puf60b (ENSPNYG00000002556) #21	scrib (ENSPNYG00000002638) #22	cdv3 (ENSPNYG00000003201)	ENSPNYG00000003204	topbp1 (ENSPNYG00000003212)	DNAJC13 (ENSPNYG00000003230)	lztfl1 (ENSPNYG00000003387)	CCR9 (ENSPNYG00000003421)	ENSPNYG00000003437	gli3 (ENSPNYG00000003454)	prpf4bb (ENSPNYG00000003501)	PXDC1 (ENSPNYG00000003532)	TMX3 (ENSPNYG00000003566)	DSEL (ENSPNYG00000003589)	ENSPNYG00000003595	CDH7 (ENSPNYG00000003618)	ENSPNYG00000003652
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00940000182574	ENSGT00400000024709.i	ENSGT00400000024709.j.a.b	ENSGT00400000024709.j.b	ENSGT00400000024709.j.a.a	ENSGT00390000004989.a.b.bb	ENSGT00390000004989.a.b.ab.a	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Eastern happy	MODERN SPECIES	21	smarcd3b (ENSACLG00000003833)	CHPF2 (ENSACLG00000003911)	abcf2a (ENSACLG00000003927)	ENSACLG00000003958	slc4a2b (ENSACLG00000004023)	cdk1 (ENSACLG00000004173)	ENSACLG00000004227	ENSACLG00000004235	ENSACLG00000004262	ENSACLG00000004273	ENSACLG00000004282	ENSACLG00000004296	ENSACLG00000004305	nrbp2b (ENSACLG00000004318) #20	puf60b (ENSACLG00000004462) #21	scrib (ENSACLG00000004557) #22	cdv3 (ENSACLG00000004688)	ENSACLG00000004721	topbp1 (ENSACLG00000004761)	DNAJC13 (ENSACLG00000004879)	lztfl1 (ENSACLG00000004958)	CCR9 (ENSACLG00000005006)	gli3 (ENSACLG00000005019)	prpf4bb (ENSACLG00000005056)	PXDC1 (ENSACLG00000005082)	TMX3 (ENSACLG00000005103)	ENSACLG00000005491	DSEL (ENSACLG00000005500)	ENSACLG00000005506	CDH7 (ENSACLG00000005876)	ENSACLG00000005898
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	989															txnipa (ENSMZEG00005024637)	ENSMZEG00005024638 #22	ENSMZEG00005024640	ENSMZEG00005024641
Zebra mbuna	MODERN SPECIES	1112	ASAP1 (ENSMZEG00005018371)	NFX1 (ENSMZEG00005018390)	smarcd3b (ENSMZEG00005018398)	CHPF2 (ENSMZEG00005018413)	abcf2a (ENSMZEG00005018416)	ENSMZEG00005018426	slc4a2b (ENSMZEG00005018443)	ENSMZEG00005018472	ENSMZEG00005018479	ENSMZEG00005018485	ENSMZEG00005018496	ENSMZEG00005018499	ENSMZEG00005018500	nrbp2b (ENSMZEG00005018504) #20	puf60b (ENSMZEG00005018515) #21	scrib (ENSMZEG00005018534) #22	cdv3 (ENSMZEG00005018542)	ENSMZEG00005018547	topbp1 (ENSMZEG00005018553)	DNAJC13 (ENSMZEG00005018568)	lztfl1 (ENSMZEG00005018594)	CCR9 (ENSMZEG00005018603)	gli3 (ENSMZEG00005018607)	prpf4bb (ENSMZEG00005018622)	PXDC1 (ENSMZEG00005018637)	TMX3 (ENSMZEG00005018645)	DSEL (ENSMZEG00005018655)	ENSMZEG00005018661	CDH7 (ENSMZEG00005018669)	ENSMZEG00005018674	IMPA1 (ENSMZEG00005018683)
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Bicolor damselfish	MODERN SPECIES	900			ENSSPAG00000012896	NFX1 (ENSSPAG00000012861)	smarcd3b (ENSSPAG00000012742)	CHPF2 (ENSSPAG00000012701)	abcf2a (ENSSPAG00000012661)	ENSSPAG00000012582	slc4a2b (ENSSPAG00000012358)	ENSSPAG00000012322	ENSSPAG00000012306	ENSSPAG00000012299	ENSSPAG00000012291	nrbp2b (ENSSPAG00000012213) #20	puf60b (ENSSPAG00000012144) #21	scrib (ENSSPAG00000012063) #22	ENSSPAG00000012045
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Spiny chromis	MODERN SPECIES	365														nrbp2b (ENSAPOG00000001764) #20	puf60b (ENSAPOG00000001713) #21	scrib (ENSAPOG00000001663) #22	cdv3 (ENSAPOG00000001639)	ENSAPOG00000001630	topbp1 (ENSAPOG00000001617)	DNAJC13 (ENSAPOG00000001596)	lztfl1 (ENSAPOG00000001569)	CCR9 (ENSAPOG00000001564)	ENSAPOG00000001557	prpf4bb (ENSAPOG00000001550)	PXDC1 (ENSAPOG00000001545)	TMX3 (ENSAPOG00000001537)
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430.lb #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Orange clownfish	MODERN SPECIES	14	myca (ENSAPEG00000012769)	fam49bb (ENSAPEG00000012710)	eef1a1l3 (ENSAPEG00000012670)	ASAP1 (ENSAPEG00000012491)	NFX1 (ENSAPEG00000012401)	smarcd3b (ENSAPEG00000012305)	CHPF2 (ENSAPEG00000012271)	abcf2a (ENSAPEG00000012199)	ENSAPEG00000012112	slc4a2b (ENSAPEG00000012059)	ENSAPEG00000012045	ENSAPEG00000012038	ENSAPEG00000012005	nrbp2b (ENSAPEG00000011981) #20	puf60b (ENSAPEG00000011923) #21	scrib (ENSAPEG00000011753) #22	ENSAPEG00000011717	cdv3 (ENSAPEG00000011688)	ENSAPEG00000011676	topbp1 (ENSAPEG00000011623)	DNAJC13 (ENSAPEG00000011400)	lztfl1 (ENSAPEG00000011355)	CCR9 (ENSAPEG00000011346)	gli3 (ENSAPEG00000011295)	prpf4bb (ENSAPEG00000011281)	PXDC1 (ENSAPEG00000011245)	TMX3 (ENSAPEG00000011181)	ENSAPEG00000011157	DSEL (ENSAPEG00000011138)	ENSAPEG00000011111	ENSAPEG00000010996
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	1041														igsf11 (ENSAOCG00000010518)	tnfsf10 (ENSAOCG00000010483)	scrib (ENSAOCG00000010398) #22
Clown anemonefish	MODERN SPECIES	2212															puf60b (ENSAOCG00000005395) #21	ENSAOCG00000005408 #22
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Carangaria	ANCESTRAL SPECIES	21	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Turbot	MODERN SPECIES	9	ENSSMAG00000018312	llgl2 (ENSSMAG00000018441)	galk1 (ENSSMAG00000018554)	ENSSMAG00000018576	ccdc57 (ENSSMAG00000018711)	slc16a3b (ENSSMAG00000018963)	CSNK1D (ENSSMAG00000018979)	ENSSMAG00000019052	ENSSMAG00000023883	enpp7.2 (ENSSMAG00000016258)	ENSSMAG00000034797	ENSSMAG00000016287	ENSSMAG00000022875	NRBP2 (ENSSMAG00000016325) #20	ENSSMAG00000016381 #21	SCRIB (ENSSMAG00000016403) #22	cdv3 (ENSSMAG00000031905)	ENSSMAG00000027206	topbp1 (ENSSMAG00000016593)	ENSSMAG00000017046	ENSSMAG00000017090	ENSSMAG00000022979	ENSSMAG00000029973	ENSSMAG00000017105	ENSSMAG00000017121	ENSSMAG00000017176	TMX3 (ENSSMAG00000017199)	ENSSMAG00000021797	ENSSMAG00000030856	ENSSMAG00000017227	ENSSMAG00000017236
Tongue sole	MODERN SPECIES	13	myca (ENSCSEG00000019889)	puf60b (ENSCSEG00000019887) #21	nrbp2b (ENSCSEG00000019882) #20	ENSCSEG00000019879	ENSCSEG00000019877	slc4a2b (ENSCSEG00000019871)	ENSCSEG00000019865	abcf2a (ENSCSEG00000019855)	CHPF2 (ENSCSEG00000019853)	smarcd3b (ENSCSEG00000019844)	NFX1 (ENSCSEG00000019832)	ENSCSEG00000019827	ASAP1 (ENSCSEG00000019814)	eef1a1l3 (ENSCSEG00000019807)	fam49bb (ENSCSEG00000019799)	scrib (ENSCSEG00000019685) #22	DSEL (ENSCSEG00000019666)	TMX3 (ENSCSEG00000019642)	PXDC1 (ENSCSEG00000019636)	prpf4bb (ENSCSEG00000019624)	gli3 (ENSCSEG00000019592)	CCR9 (ENSCSEG00000019575)	lztfl1 (ENSCSEG00000019570)	DNAJC13 (ENSCSEG00000019506)	topbp1 (ENSCSEG00000019484)	ENSCSEG00000019477	cdv3 (ENSCSEG00000019476)	ENSCSEG00000019458	ENSCSEG00000019451	CDH7 (ENSCSEG00000019444)	ENSCSEG00000019435
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000178525	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Barramundi perch	MODERN SPECIES	146														nrbp2b (ENSLCAG00010013468) #20	puf60b (ENSLCAG00010013544) #21	scrib (ENSLCAG00010013691) #22	ENSLCAG00010013763	ARHGAP21 (ENSLCAG00010013765)	ENSLCAG00010013769	THNSL1 (ENSLCAG00010013785)	GPR158 (ENSLCAG00010013804)	anxa13 (ENSLCAG00010013816)	myo3a (ENSLCAG00010013875)	gad2 (ENSLCAG00010013936)	apbb1ip (ENSLCAG00010014198)	pdss1 (ENSLCAG00010014229)	abi1a (ENSLCAG00010014265)	acbd5a (ENSLCAG00010014319)	mastl (ENSLCAG00010014322)	YME1L1 (ENSLCAG00010014351)	ENSLCAG00010014372
Seriola	ANCESTRAL SPECIES	27	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT01060000248676.a.b	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000178525	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00950000183098.b.a.b	ENSGT00390000001455.b	ENSGT00390000010255	ENSGT00940000156069	ENSGT00940000172071
Greater amberjack	MODERN SPECIES	217	myca (ENSSDUG00000009070)	fam49bb (ENSSDUG00000009087)	eef1a1l3 (ENSSDUG00000009163)	ASAP1 (ENSSDUG00000009202)	NFX1 (ENSSDUG00000009395)	smarcd3b (ENSSDUG00000009485)	CHPF2 (ENSSDUG00000009673)	abcf2a (ENSSDUG00000009698)	ENSSDUG00000009751	slc4a2b (ENSSDUG00000009824)	ENSSDUG00000009855	ENSSDUG00000009867	ENSSDUG00000009876	nrbp2b (ENSSDUG00000009888) #20	puf60b (ENSSDUG00000009935) #21	scrib (ENSSDUG00000010268) #22	ENSSDUG00000010340	cdv3 (ENSSDUG00000010355)	ENSSDUG00000010369	topbp1 (ENSSDUG00000010416)	DNAJC13 (ENSSDUG00000010481)	lztfl1 (ENSSDUG00000010599)	CCR9 (ENSSDUG00000010618)	ENSSDUG00000010640	gli3 (ENSSDUG00000010654)	prpf4bb (ENSSDUG00000010691)	psme2 (ENSSDUG00000010723)	lsm5 (ENSSDUG00000010762)	avl9 (ENSSDUG00000010775)	kbtbd2 (ENSSDUG00000010838)	ENSSDUG00000010850
Yellowtail amberjack	MODERN SPECIES	2786	fam49bb (ENSSLDG00000023740)	eef1a1l3 (ENSSLDG00000023761)	ASAP1 (ENSSLDG00000023775)	ENSSLDG00000023812	NFX1 (ENSSLDG00000023817)	smarcd3b (ENSSLDG00000023831)	CHPF2 (ENSSLDG00000023839)	abcf2a (ENSSLDG00000023850)	ENSSLDG00000023874	slc4a2b (ENSSLDG00000023917)	ENSSLDG00000023951	ENSSLDG00000023956	ENSSLDG00000023962	nrbp2b (ENSSLDG00000023974) #20	puf60b (ENSSLDG00000024011) #21	scrib (ENSSLDG00000024090) #22
Anabantaria	ANCESTRAL SPECIES	22	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.c.lb.a
Zig-zag eel	MODERN SPECIES	12	eef1a1l3 (ENSMAMG00000009907)	ASAP1 (ENSMAMG00000009940)	ENSMAMG00000010139	SMARCD3 (ENSMAMG00000010157)	ENSMAMG00000026737	ABCF2 (ENSMAMG00000010198)	ENSMAMG00000010229	slc4a2b (ENSMAMG00000010293)	si:ch1073-406l10.2 (ENSMAMG00000027037)	ENSMAMG00000025596	ENSMAMG00000028109	ENSMAMG00000026698	ENSMAMG00000027119	nrbp2b (ENSMAMG00000028463) #20	ENSMAMG00000010394 #21	SCRIB (ENSMAMG00000010469) #22	ENSMAMG00000010540	cdv3 (ENSMAMG00000028674)	ENSMAMG00000010595	topbp1 (ENSMAMG00000010610)	ENSMAMG00000010771	ENSMAMG00000010865	ENSMAMG00000010895	ENSMAMG00000010901	ENSMAMG00000010914	ENSMAMG00000025237	TMX3 (ENSMAMG00000010964)	ENSMAMG00000010976	ENSMAMG00000010986	CDH7 (ENSMAMG00000011015)	IMPA1 (ENSMAMG00000027128)
Anabantoidei	ANCESTRAL SPECIES	20	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.c.lb.a
Siamese fighting fish	MODERN SPECIES	15	eef1a1l3 (ENSBSLG00000010889)	ASAP1 (ENSBSLG00000010963)	NFX1 (ENSBSLG00000012452)	smarcd3b (ENSBSLG00000012640)	CHPF2 (ENSBSLG00000013088)	abcf2a (ENSBSLG00000013379)	ENSBSLG00000014389	slc4a2b (ENSBSLG00000014467)	ENSBSLG00000015066	ENSBSLG00000015068	ENSBSLG00000015073	ENSBSLG00000015202	ENSBSLG00000015281	nrbp2b (ENSBSLG00000015382) #20	puf60b (ENSBSLG00000015867) #21	scrib (ENSBSLG00000016884) #22	cdv3 (ENSBSLG00000018081)	ENSBSLG00000018084	topbp1 (ENSBSLG00000018201)	DNAJC13 (ENSBSLG00000018339)	lztfl1 (ENSBSLG00000018601)	ENSBSLG00000018613	gli3 (ENSBSLG00000018803)	prpf4bb (ENSBSLG00000019079)	PXDC1 (ENSBSLG00000019354)	TMX3 (ENSBSLG00000019360)	ENSBSLG00000019416	CDH7 (ENSBSLG00000019482)	ENSBSLG00000019745	ENSBSLG00000019752	ENSBSLG00000008261
Climbing perch	MODERN SPECIES	11	fam49bb (ENSATEG00000002221)	ASAP1 (ENSATEG00000002089)	ENSATEG00000002080	SMARCD3 (ENSATEG00000002061)	ENSATEG00000002039	ABCF2 (ENSATEG00000001990)	ENSATEG00000001889	slc4a2b (ENSATEG00000001881)	ENSATEG00000027615	ENSATEG00000001869	ENSATEG00000001831	ENSATEG00000027507	ENSATEG00000001798	nrbp2b (ENSATEG00000001781) #20	ENSATEG00000001730 #21	SCRIB (ENSATEG00000000909) #22	ENSATEG00000000800	cdv3 (ENSATEG00000028179)	ENSATEG00000000754	topbp1 (ENSATEG00000000533)	ENSATEG00000000287	ENSATEG00000000230	ENSATEG00000000224	ENSATEG00000000138	ENSATEG00000000121	ENSATEG00000025856	TMX3 (ENSATEG00000026110)	ENSATEG00000000054	ENSATEG00000023505	ENSATEG00000023502	CDH7 (ENSATEG00000023496)
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Tetraodontidae	ANCESTRAL SPECIES	18	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b.b	ENSGT00390000004989.a.b.a	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a	ENSGT00940000154634.c.lb.a
Tetraodon	MODERN SPECIES	21	OTULIN (ENSTNIG00000017134)	ankha (ENSTNIG00000017135)	myca (ENSTNIG00000017136)	fam49bb (ENSTNIG00000017137)	eef1a1l3 (ENSTNIG00000017138)	ASAP1 (ENSTNIG00000017139)	ENSTNIG00000017140	smarcd3b (ENSTNIG00000017141)	CHPF2 (ENSTNIG00000017142)	abcf2a (ENSTNIG00000017143)	ENSTNIG00000017144	slc4a2b (ENSTNIG00000017145)	ENSTNIG00000017146	nrbp2b (ENSTNIG00000013676) #20	puf60b (ENSTNIG00000013675) #21	scrib (ENSTNIG00000013674) #22	cdv3 (ENSTNIG00000013673)	topbp1 (ENSTNIG00000013672)	DNAJC13 (ENSTNIG00000013671)	lztfl1 (ENSTNIG00000013670)	CCR9 (ENSTNIG00000013669)	gli3 (ENSTNIG00000013668)	prpf4bb (ENSTNIG00000013667)	PXDC1 (ENSTNIG00000013666)	TMX3 (ENSTNIG00000013665)	DSEL (ENSTNIG00000013664)	ENSTNIG00000013663	CDH7 (ENSTNIG00000013662)	ENSTNIG00000013661	IMPA1 (ENSTNIG00000013660)	tbcc (ENSTNIG00000013659)
Fugu	MODERN SPECIES	1	myc (ENSTRUG00000008797)	eef1a1l3 (ENSTRUG00000009006)	ASAP1 (ENSTRUG00000009127)	NFX1 (ENSTRUG00000009872)	CHPF2 (ENSTRUG00000010232)	abcf2a (ENSTRUG00000010308)	ENSTRUG00000023734	ENSTRUG00000021158	ENSTRUG00000025521	ENSTRUG00000021475	ENSTRUG00000024352	ENSTRUG00000024686	ENSTRUG00000032484	nrbp2b (ENSTRUG00000004607) #20	puf60b (ENSTRUG00000005420) #21	scrib (ENSTRUG00000005856) #22	cdv3 (ENSTRUG00000006425)	ENSTRUG00000022607	topbp1 (ENSTRUG00000006528)	DNAJC13 (ENSTRUG00000006944)	lztfl1 (ENSTRUG00000007474)	CCR9 (ENSTRUG00000023885)	gli3 (ENSTRUG00000007692)	prpf4bb (ENSTRUG00000008327)	TMX3 (ENSTRUG00000008670)	DSEL (ENSTRUG00000024518)	ENSTRUG00000030570	ENSTRUG00000008877	CDH7 (ENSTRUG00000009801)	ENSTRUG00000025159	IMPA1 (ENSTRUG00000003868)
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Ballan wrasse	MODERN SPECIES	59			NFX1 (ENSLBEG00000013253)	smarcd3b (ENSLBEG00000013144)	CHPF2 (ENSLBEG00000013093)	abcf2a (ENSLBEG00000013048)	ENSLBEG00000012975	slc4a2b (ENSLBEG00000012874)	ENSLBEG00000012837	ENSLBEG00000012827	ENSLBEG00000012811	ENSLBEG00000012794	nrbp2b (ENSLBEG00000012720) #20	ENSLBEG00000012670	puf60b (ENSLBEG00000012505) #21	scrib (ENSLBEG00000012249) #22	KIF9 (ENSLBEG00000012184)	cdv3 (ENSLBEG00000012160)	ENSLBEG00000012142	topbp1 (ENSLBEG00000011978)	DNAJC13 (ENSLBEG00000011792)	lztfl1 (ENSLBEG00000011723)	CCR9 (ENSLBEG00000011710)	ENSLBEG00000011688	gli3 (ENSLBEG00000011632)	prpf4bb (ENSLBEG00000011594)	PXDC1 (ENSLBEG00000011560)	TMX3 (ENSLBEG00000011491)	DSEL (ENSLBEG00000011460)	ENSLBEG00000011416	CDH7 (ENSLBEG00000011365)
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000178137	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k
Eupecaria_C	ANCESTRAL SPECIES	19	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	17	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
European seabass	MODERN SPECIES	8	42SP50 (ENSDLAG00005004878)	ASAP1 (ENSDLAG00005005012)	ENSDLAG00005008350	SMARCD3 (ENSDLAG00005008660)	ENSDLAG00005030890	ABCF2 (ENSDLAG00005009120)	ENSDLAG00005009346	slc4a2b (ENSDLAG00005009418)	ENSDLAG00005032892	ENSDLAG00005033004	ENSDLAG00005002430	ENSDLAG00005015072	ENSDLAG00005028684	nrbp2b (ENSDLAG00005010649) #20	PUF60 (ENSDLAG00005010681) #21	SCRIB (ENSDLAG00005011079) #22	ENSDLAG00005014308	CDV3 (ENSDLAG00005027394)	ENSDLAG00005029165	topbp1 (ENSDLAG00005014452)	ENSDLAG00005016083	ENSDLAG00005018018	ENSDLAG00005018027	ENSDLAG00005018034	ENSDLAG00005018128	ENSDLAG00005031002	TMX3 (ENSDLAG00005018419)	ENSDLAG00005034393	ENSDLAG00005018832	CDH7 (ENSDLAG00005018907)	ENSDLAG00005019941
Large yellow croaker	MODERN SPECIES	494	smarcd3b (ENSLCRG00005020325)	CHPF2 (ENSLCRG00005020323)	abcf2a (ENSLCRG00005020309)	ENSLCRG00005020304	slc4a2b (ENSLCRG00005017301)	ENSLCRG00005017252	ENSLCRG00005017249	ENSLCRG00005017248	ENSLCRG00005017245	ENSLCRG00005017235	ENSLCRG00005017230	ENSLCRG00005017226	ENSLCRG00005017221	nrbp2b (ENSLCRG00005016711) #20	puf60b (ENSLCRG00005016178) #21	scrib (ENSLCRG00005013450) #22	KIF9 (ENSLCRG00005013417)	cdv3 (ENSLCRG00005013413)	ENSLCRG00005013410	topbp1 (ENSLCRG00005013390)	DNAJC13 (ENSLCRG00005013377)	lztfl1 (ENSLCRG00005013368)	ENSLCRG00005013364	ENSLCRG00005013353	prpf4bb (ENSLCRG00005012479)	PXDC1 (ENSLCRG00005012465)	TMX3 (ENSLCRG00005019655)	DSEL (ENSLCRG00005019652)	ENSLCRG00005019650	CDH7 (ENSLCRG00005019392)	ENSLCRG00005019386
Gilthead seabream	MODERN SPECIES	10	eef1a1l3 (ENSSAUG00010025416)	ASAP1 (ENSSAUG00010025209)	NFX1 (ENSSAUG00010025069)	smarcd3b (ENSSAUG00010025032)	CHPF2 (ENSSAUG00010025025)	abcf2a (ENSSAUG00010024908)	ENSSAUG00010024905	slc4a2b (ENSSAUG00010023272)	ENSSAUG00010023243	ENSSAUG00010023242	ENSSAUG00010023241	ENSSAUG00010023240	ENSSAUG00010023239	nrbp2b (ENSSAUG00010023093) #20	puf60b (ENSSAUG00010022582) #21	scrib (ENSSAUG00010020733) #22	KIF9 (ENSSAUG00010020685)	cdv3 (ENSSAUG00010020676)	ENSSAUG00010020673	topbp1 (ENSSAUG00010020657)	ENSSAUG00010020654	DNAJC13 (ENSSAUG00010020652)	lztfl1 (ENSSAUG00010020644)	CCR9 (ENSSAUG00010020640)	map3k22 (ENSSAUG00010020633)	ENSSAUG00010020632	plcd1a (ENSSAUG00010018908)	VILL (ENSSAUG00010015920)	ctdspla (ENSSAUG00010015831)	gars1 (ENSSAUG00010015304)	hhatlb (ENSSAUG00010015272)
Perciformes	ANCESTRAL SPECIES	21	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925.v.b	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Cottioidei	ANCESTRAL SPECIES	21	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925.v.b	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Stickleback	MODERN SPECIES	20	eef1a1l3 (ENSGACG00000004505)	ASAP1 (ENSGACG00000004538)	ENSGACG00000004557	NFX1 (ENSGACG00000004560)	smarcd3b (ENSGACG00000004586)	CHPF2 (ENSGACG00000004595)	abcf2a (ENSGACG00000004604)	ENSGACG00000004661	slc4a2b (ENSGACG00000004664)	ENSGACG00000004690	ENSGACG00000004694	ENSGACG00000004701	ENSGACG00000004703	nrbp2b (ENSGACG00000004706) #20	puf60b (ENSGACG00000004717) #21	scrib (ENSGACG00000004725) #22	KIF9 (ENSGACG00000004747)	cdv3 (ENSGACG00000004751)	topbp1 (ENSGACG00000004755)	DNAJC13 (ENSGACG00000004764)	lztfl1 (ENSGACG00000004804)	CCR9 (ENSGACG00000004830)	gli3 (ENSGACG00000004834)	prpf4bb (ENSGACG00000004845)	PXDC1 (ENSGACG00000004852)	TMX3 (ENSGACG00000004863)	DSEL (ENSGACG00000004870)	ENSGACG00000004873	CDH7 (ENSGACG00000004878)	ENSGACG00000004882	IMPA1 (ENSGACG00000004905)
Lumpfish	MODERN SPECIES	12	myca (ENSCLMG00005018272)	fam49bb (ENSCLMG00005018082)	eef1a1l3 (ENSCLMG00005018075)	ASAP1 (ENSCLMG00005014493)	NFX1 (ENSCLMG00005014385)	smarcd3b (ENSCLMG00005014373)	CHPF2 (ENSCLMG00005014371)	abcf2a (ENSCLMG00005013875)	ENSCLMG00005013869	slc4a2b (ENSCLMG00005013816)	ENSCLMG00005013812	ENSCLMG00005013811	ENSCLMG00005013810	nrbp2b (ENSCLMG00005013807) #20	puf60b (ENSCLMG00005013607) #21	scrib (ENSCLMG00005009548) #22	cdv3 (ENSCLMG00005009485)	ENSCLMG00005009484	topbp1 (ENSCLMG00005009412)	DNAJC13 (ENSCLMG00005009383)	lztfl1 (ENSCLMG00005009377)	CCR9 (ENSCLMG00005009376)	gli3 (ENSCLMG00005009375)	prpf4bb (ENSCLMG00005009339)	PXDC1 (ENSCLMG00005009333)	TMX3 (ENSCLMG00005008926)	DSEL (ENSCLMG00005008918)	ENSCLMG00005008912	CDH7 (ENSCLMG00005008087)	ENSCLMG00005008076	IMPA1 (ENSCLMG00005008074)
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT00940000155285.b.j.a.b	ENSGT00390000015159.b.a	ENSGT00940000165526	ENSGT00940000158547.c	ENSGT00940000156325	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT00400000022514	ENSGT00940000158259.b	ENSGT00400000024709.i	ENSGT00400000024709.j	ENSGT00390000004989.a.b	ENSGT00940000160430 #20	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00390000000805	ENSGT00390000000626	ENSGT00940000157001	ENSGT00390000017582	ENSGT00390000016415	ENSGT01030000234667.a.a.b.e	ENSGT00940000155925.v.b	ENSGT00940000155562.l.b	ENSGT00390000009209	ENSGT00930000151022.a	ENSGT00390000006522.a.a	ENSGT00940000166818	ENSGT00940000157031.k	ENSGT00940000154634.d.a
Pike perch	MODERN SPECIES	94	fam49bb (ENSSLUG00000017424)	eef1a1l3 (ENSSLUG00000017352)	ASAP1 (ENSSLUG00000013531)	NFX1 (ENSSLUG00000013237)	smarcd3b (ENSSLUG00000013142)	CHPF2 (ENSSLUG00000013109)	abcf2a (ENSSLUG00000012962)	ENSSLUG00000012897	slc4a2b (ENSSLUG00000009083)	ENSSLUG00000008888	ENSSLUG00000008884	ENSSLUG00000008874	ENSSLUG00000008860	nrbp2b (ENSSLUG00000008558) #20	puf60b (ENSSLUG00000007426) #21	scrib (ENSSLUG00000007213) #22	ENSSLUG00000007100	cdv3 (ENSSLUG00000007067)	ENSSLUG00000007055	topbp1 (ENSSLUG00000006820)	DNAJC13 (ENSSLUG00000006785)	lztfl1 (ENSSLUG00000006778)	CCR9 (ENSSLUG00000006768)	gli3 (ENSSLUG00000006508)	prpf4bb (ENSSLUG00000006383)	PXDC1 (ENSSLUG00000006361)	TMX3 (ENSSLUG00000005573)
Channel bull blenny	MODERN SPECIES	12	myca (ENSCGOG00000018778)	fam49bb (ENSCGOG00000018802)	eef1a1l3 (ENSCGOG00000019712)	ASAP1 (ENSCGOG00000019982)	NFX1 (ENSCGOG00000021523)	smarcd3b (ENSCGOG00000021683)	CHPF2 (ENSCGOG00000021797)	abcf2a (ENSCGOG00000021806)	ENSCGOG00000022001	slc4a2b (ENSCGOG00000022017)	ENSCGOG00000022177	ENSCGOG00000022178	ENSCGOG00000022180	nrbp2b (ENSCGOG00000022184) #20	puf60b (ENSCGOG00000022205) #21	scrib (ENSCGOG00000022394) #22	KIF9 (ENSCGOG00000022912)	cdv3 (ENSCGOG00000022916)	ENSCGOG00000022917	topbp1 (ENSCGOG00000022933)	lztfl1 (ENSCGOG00000023282)	CCR9 (ENSCGOG00000023289)	ENSCGOG00000023293	ENSCGOG00000023295	gli3 (ENSCGOG00000023297)	prpf4bb (ENSCGOG00000023299)	PXDC1 (ENSCGOG00000023300)	TMX3 (ENSCGOG00000023304)	ENSCGOG00000012560	CDH7 (ENSCGOG00000012585)	ENSCGOG00000013926
Otomorpha	ANCESTRAL SPECIES	135	ENSGT00940000156086.d	ENSGT00490000043432	ENSGT00940000154095.b.a.a.b	ENSGT00940000166388.c	ENSGT00940000156321	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b.f.a	ENSGT00530000063891.cc	ENSGT00940000159935.g.b	ENSGT00580000081600.c.a	ENSGT01010000222287.B.a.b.a.n.a	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000177394	ENSGT00940000164537	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT01050000244890.a.b.b.d ##17	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325	ENSGT00940000158547.c
Clupeiformes	ANCESTRAL SPECIES	22																ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000164537	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325	ENSGT00940000160795.g	ENSGT00940000161705	ENSGT01030000234543.A.a
Atlantic herring	MODERN SPECIES	8	ENSCHAG00000016130	KCNH2 (ENSCHAG00000017506)	ENSCHAG00000017562	chmp4c (ENSCHAG00000017620)	ENSCHAG00000017655	ENSCHAG00000019767	ENSCHAG00000020404	ENSCHAG00000020706	ENSCHAG00000021075	ENSCHAG00000021200	ENSCHAG00000021857	ENSCHAG00000022081	ENSCHAG00000022091	ENSCHAG00000022102	ENSCHAG00000022259	scrib (ENSCHAG00000022287) #22	KIF9 (ENSCHAG00000022751)	ENSCHAG00000022763	rgs9bp (ENSCHAG00000022768)	zgc:165532 (ENSCHAG00000022774)	dph2 (ENSCHAG00000022795)	ncf2 (ENSCHAG00000022818)	garem (ENSCHAG00000022890)	PRKDC (ENSCHAG00000023074)	abcf2b (ENSCHAG00000025424)	ENSCHAG00000025478	smarcd3b (ENSCHAG00000025492)	NFX1 (ENSCHAG00000025569)	ENSCHAG00000025821	LRRTM1 (ENSCHAG00000025823)	ENSCHAG00000025826
Denticle herring	MODERN SPECIES	11	zdhhc23b (ENSDCDG00000000259)	ccdc191 (ENSDCDG00000000272)	qtrt2 (ENSDCDG00000000286)	drd3 (ENSDCDG00000000306)	ENSDCDG00000000313	KPNA1 (ENSDCDG00000000410)	fam162a (ENSDCDG00000000474)	mix23 (ENSDCDG00000000483)	ENSDCDG00000000487	rbbp8 (ENSDCDG00000000497)	AGL (ENSDCDG00000000518)	gli3 (ENSDCDG00000000548)	ENSDCDG00000000553	ENSDCDG00000000556	lztfl1 (ENSDCDG00000000560)	scrib (ENSDCDG00000000703) #22	ENSDCDG00000000938	ENSDCDG00000000942	rgs9bp (ENSDCDG00000000948)	zgc:165532 (ENSDCDG00000000950)	dph2 (ENSDCDG00000000956)	ncf2 (ENSDCDG00000000975)	garem (ENSDCDG00000001044)	PRKDC (ENSDCDG00000001097)	abcf2b (ENSDCDG00000001365)	CHPF2 (ENSDCDG00000001373)	smarcd3b (ENSDCDG00000001387)	NFX1 (ENSDCDG00000001611)	ENSDCDG00000001839	ASAP1 (ENSDCDG00000001919)	eef1a1l3 (ENSDCDG00000002637)
Otophysi	ANCESTRAL SPECIES	81	ENSGT00940000156086.d	ENSGT00490000043432	ENSGT00940000154095.b.a.a.b	ENSGT00940000166388.c	ENSGT00940000156321	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b.f.a	ENSGT00530000063891.cc	ENSGT00940000159935.g.b	ENSGT00580000081600.c.a	ENSGT01010000222287.B.a.b.a.n.a	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000177394	ENSGT00940000164537	ENSGT00940000154574.d	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT01050000244890.a.b.b.d ##17	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325
Cyprinoidei	ANCESTRAL SPECIES	3	ENSGT00940000156086.d	ENSGT00490000043432	ENSGT00940000154095.b.a.a.b	ENSGT00940000166388.c	ENSGT00940000156321	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b.f.a	ENSGT00530000063891.cc	ENSGT00940000159935.g.b	ENSGT00580000081600.c.a	ENSGT01010000222287.B.a.b.a.n.a	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT01050000244890.a.b.b.d ##17	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325	ENSGT00440000033408.a.a	ENSGT00940000165597	ENSGT00940000157567
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	150	ENSGT00940000156086.d.f	ENSGT00490000043432	ENSGT00940000154095.b.a.a.b.a	ENSGT00940000166388.c.a	ENSGT00940000156321.k	ENSGT00940000160059.a.a	ENSGT00940000153458.A.b	ENSGT00390000007809.b.e	ENSGT00390000003759.d	ENSGT00940000159119.b.f.a	ENSGT00530000063891.cc.t	ENSGT00940000159935.g.b.h	ENSGT00580000081600.c.a.a	ENSGT01010000222287.B.a.b.a.n.a.a	ENSGT00940000155594.c.b.d #21	ENSGT00940000154025.a.m #22	ENSGT00940000158533	ENSGT00940000153725.a.b.b.d
Goldfish	MODERN SPECIES	47	ncapg2 (ENSCARG00000000605)	ptprn2 (ENSCARG00000000757)	ENSCARG00000000804	dnajb6b (ENSCARG00000000828)	ube3c (ENSCARG00000000904)	mnx1 (ENSCARG00000001031)	nom1 (ENSCARG00000001035)	lmbr1 (ENSCARG00000001096)	rnf32 (ENSCARG00000001358)	shha (ENSCARG00000001367)	RBM33 (ENSCARG00000001372)	en2a (ENSCARG00000001394)	insig1 (ENSCARG00000001400)	htr5ab (ENSCARG00000001408)	puf60b (ENSCARG00000001426) #21	scrib (ENSCARG00000001512) #22	KIF9 (ENSCARG00000001620)	zgc:165532 (ENSCARG00000001634)	dph2 (ENSCARG00000001642)	ncf2 (ENSCARG00000001700)	garem (ENSCARG00000001946)	PRKDC (ENSCARG00000002266)	abcf2b (ENSCARG00000003210)	CHPF2 (ENSCARG00000003244)	smarcd3b (ENSCARG00000003256)	NFX1 (ENSCARG00000003422)	plxdc2b (ENSCARG00000005527)	malrd1 (ENSCARG00000006012)	arl8 (ENSCARG00000006604)	hrh3 (ENSCARG00000006647)	vps35 (ENSCARG00000006656)
Cyprininae_a	ANCESTRAL SPECIES	2	ENSGT00940000156086.d.f	ENSGT00490000043432	ENSGT00940000154095.b.a.a.b.a	ENSGT00940000166388.c.a	ENSGT00940000156321.k	ENSGT00940000160059.a.a.f	ENSGT00940000153458.A.b	ENSGT00390000007809.b.e	ENSGT00390000003759.d	ENSGT00940000159119.b.f.a.f	ENSGT00530000063891.cc.t	ENSGT00940000159935.g.b.h	ENSGT00580000081600.c.a.a	ENSGT01010000222287.B.a.b.a.n.a.a	ENSGT00940000155594.c.b.d #21	ENSGT00940000154025.a.m #22	ENSGT00940000158533	ENSGT00940000153725.a.b.b.d
Common carp reference	MODERN SPECIES		ENSCCRG00000058771	ncapg2 (ENSCCRG00000045505)	ptprn2 (ENSCCRG00000075233)	dnajb6b (ENSCCRG00000012978)	ube3c (ENSCCRG00000043946)	mnx1 (ENSCCRG00000020484)	nom1 (ENSCCRG00000020459)	lmbr1 (ENSCCRG00000020441)	rnf32 (ENSCCRG00000020432)	shha (ENSCCRG00000072103)	ENSCCRG00000067417	en2a (ENSCCRG00000054867)	insig1 (ENSCCRG00000011040)	htr5ab (ENSCCRG00000011036)	puf60b (ENSCCRG00000010883) #21	scrib (ENSCCRG00000036981) #22	ENSCCRG00000043450	rgs9bp (ENSCCRG00000072177)	dph2 (ENSCCRG00000043587)	ncf2 (ENSCCRG00000043614)	garem (ENSCCRG00000059529)	ENSCCRG00000051997	abcf2b (ENSCCRG00000060055)	ENSCCRG00000066731	smarcd3b (ENSCCRG00000052072)	ENSCCRG00000052203	plxdc2b (ENSCCRG00000052239)	arl8 (ENSCCRG00000040509)	hrh3 (ENSCCRG00000073971)	orc6 (ENSCCRG00000002510)	vps35 (ENSCCRG00000045673)
Golden-line barbel	MODERN SPECIES	135	ESYT2 (ENSSGRG00000046429)	ncapg2 (ENSSGRG00000046861)	ptprn2 (ENSSGRG00000046862)	dnajb6b (ENSSGRG00000046864)	ube3c (ENSSGRG00000046879)	mnx1 (ENSSGRG00000047242)	nom1 (ENSSGRG00000047243)	lmbr1 (ENSSGRG00000047257)	rnf32 (ENSSGRG00000047262)	shha (ENSSGRG00000047267)	RBM33 (ENSSGRG00000047268)	insig1 (ENSSGRG00000047272)	htr5ab (ENSSGRG00000047274)	ENSSGRG00000047275	ENSSGRG00000047277 #21	scrib (ENSSGRG00000047283) #22	ENSSGRG00000047287	rgs9bp (ENSSGRG00000047290)	zgc:165532 (ENSSGRG00000047291)	dph2 (ENSSGRG00000047292)	ncf2 (ENSSGRG00000047295)	garem (ENSSGRG00000047296)	PRKDC (ENSSGRG00000047315)	abcf2b (ENSSGRG00000047889)	CHPF2 (ENSSGRG00000047890)	smarcd3b (ENSSGRG00000047891)	ENSSGRG00000047980	plxdc2b (ENSSGRG00000047988)	malrd1 (ENSSGRG00000047989)	arl8 (ENSSGRG00000047990)	vps35 (ENSSGRG00000047991)
Cyprininae	ANCESTRAL SPECIES	170	ENSGT00390000006896.`b.b #8	ENSGT00990000210289	ENSGT00390000013743	ENSGT00940000156086.d.e	ENSGT00940000154095.b.a.a.b.b	ENSGT00940000166388.c.b	ENSGT00940000156321.l	ENSGT00940000153458.A.a	ENSGT00390000007809.b.f	ENSGT00390000003759.c	ENSGT00530000063891.cc.s	ENSGT00940000159935.g.b.g	ENSGT00580000081600.c.a.b	ENSGT01010000222287.B.a.b.a.n.a.b	ENSGT00940000155594.c.b.c #21	ENSGT00940000154025.a.n #22	ENSGT00940000153725.a.b.b.c	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b.d	ENSGT00530000063834.e.a.f	ENSGT00940000155633.D.c	ENSGT00630000089910.m	ENSGT01050000244857.B.a.e	ENSGT00940000158945.u.a.b	ENSGT00940000156325.m	ENSGT00440000033408.a.a.c	ENSGT00940000165597.f	ENSGT00940000157567.h	ENSGT00940000163206.a.a	ENSGT00390000007315.t
Cyprininae_a	ANCESTRAL SPECIES	173	ENSGT00990000210289	ENSGT00390000013743	ENSGT00940000156086.d.e	ENSGT00940000154095.b.a.a.b.b	ENSGT00940000166388.c.b	ENSGT00940000156321.l	ENSGT00940000160059.a.a.e	ENSGT00390000007809.b.f	ENSGT00390000003759.c	ENSGT00940000159119.b.f.a.e	ENSGT00530000063891.cc.s	ENSGT00940000159935.g.b.g	ENSGT00580000081600.c.a.b	ENSGT01010000222287.B.a.b.a.n.a.b	ENSGT00940000155594.c.b.c #21	ENSGT00940000154025.a.n #22	ENSGT00940000153725.a.b.b.c	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b.d	ENSGT00530000063834.e.a.f	ENSGT00940000155633.D.c	ENSGT00630000089910.m	ENSGT01050000244857.B.a.e	ENSGT00940000158945.u.a.b	ENSGT00940000156325.m	ENSGT00440000033408.a.a.c	ENSGT00940000165597.f	ENSGT00940000157567.h	ENSGT00940000163206.a.a	ENSGT00390000007315.t
Golden-line barbel	MODERN SPECIES	253										en2a (ENSSGRG00000005781)	insig1 (ENSSGRG00000005779)	htr5ab (ENSSGRG00000005776)	rpl21 (ENSSGRG00000005774)	ENSSGRG00000005771	puf60b (ENSSGRG00000002368) #21	scrib (ENSSGRG00000000855) #22	ENSSGRG00000000833	rgs9bp (ENSSGRG00000000830)	zgc:165532 (ENSSGRG00000000827)	dph2 (ENSSGRG00000000824)	ncf2 (ENSSGRG00000000763)	garem (ENSSGRG00000000752)	smarcd3b (ENSSGRG00000000739)	plxdc2b (ENSSGRG00000000715)	malrd1 (ENSSGRG00000000709)	ENSSGRG00000000707	hrh3 (ENSSGRG00000000706)	vps35 (ENSSGRG00000000405)	orc6 (ENSSGRG00000000365)	mylk3 (ENSSGRG00000000353)	zgc:92818 (ENSSGRG00000000348)
Common carp reference	MODERN SPECIES	6	DYNC2I1 (ENSCCRG00000078207)	ESYT2 (ENSCCRG00000016175)	ptprn2 (ENSCCRG00000055744)	dnajb6b (ENSCCRG00000076986)	ube3c (ENSCCRG00000040279)	mnx1 (ENSCCRG00000026004)	lmbr1 (ENSCCRG00000065105)	rnf32 (ENSCCRG00000056674)	shha (ENSCCRG00000020413)	ENSCCRG00000000169	en2a (ENSCCRG00000076863)	insig1 (ENSCCRG00000062810)	htr5ab (ENSCCRG00000058331)	ENSCCRG00000061974	puf60b (ENSCCRG00000010726) #21	scrib (ENSCCRG00000043750) #22	rgs9bp (ENSCCRG00000065773)	ncf2 (ENSCCRG00000064338)	garem (ENSCCRG00000027454)	ENSCCRG00000004535	ENSCCRG00000070878	smarcd3b (ENSCCRG00000076171)	ENSCCRG00000052194	plxdc2b (ENSCCRG00000009204)	malrd1 (ENSCCRG00000040630)	arl8 (ENSCCRG00000045726)	hrh3 (ENSCCRG00000071776)	vps35 (ENSCCRG00000054769)	orc6 (ENSCCRG00000045730)	mylk3 (ENSCCRG00000045732)	zgc:92818 (ENSCCRG00000045739)
Goldfish	MODERN SPECIES	25	DYNC2I1 (ENSCARG00000008038)	ESYT2 (ENSCARG00000008125)	ptprn2 (ENSCARG00000008499)	dnajb6b (ENSCARG00000008643)	ube3c (ENSCARG00000008671)	mnx1 (ENSCARG00000008787)	nom1 (ENSCARG00000008795)	lmbr1 (ENSCARG00000008857)	shha (ENSCARG00000008915)	RBM33 (ENSCARG00000008925)	en2a (ENSCARG00000008946)	insig1 (ENSCARG00000008953)	htr5ab (ENSCARG00000008962)	ENSCARG00000008967	puf60b (ENSCARG00000008982) #21	scrib (ENSCARG00000009291) #22	rgs9bp (ENSCARG00000014242)	garem (ENSCARG00000014250)	CHPF2 (ENSCARG00000014269)	smarcd3b (ENSCARG00000014280)	NFX1 (ENSCARG00000014439)	plxdc2b (ENSCARG00000016018)	ENSCARG00000016152	arl8 (ENSCARG00000016159)	hrh3 (ENSCARG00000016179)	vps35 (ENSCARG00000016187)	ENSCARG00000016202	orc6 (ENSCARG00000016204)	mylk3 (ENSCARG00000016238)	zgc:92818 (ENSCARG00000016292)	gpt2 (ENSCARG00000016369)
Zebrafish	MODERN SPECIES	22	ESYT2 (ENSDARG00000078964)	ncapg2 (ENSDARG00000060023)	ptprn2 (ENSDARG00000035970)	dnajb6b (ENSDARG00000020953)	ube3c (ENSDARG00000035978)	mnx1 (ENSDARG00000035984)	nom1 (ENSDARG00000060027)	lmbr1 (ENSDARG00000024092)	rnf32 (ENSDARG00000060035)	shha (ENSDARG00000068567)	RBM33 (ENSDARG00000068562)	en2a (ENSDARG00000026599)	insig1 (ENSDARG00000010658)	htr5ab (ENSDARG00000068557)	puf60b (ENSDARG00000001241) #21	scrib (ENSDARG00000000861) #22	ENSDARG00000031693	si:dkey-86l18.10 (ENSDARG00000105528)	rgs9bp (ENSDARG00000009466)	MCUR1 (ENSDARG00000016964)	dph2 (ENSDARG00000078077)	ncf2 (ENSDARG00000005821)	garem (ENSDARG00000017242)	PRKDC (ENSDARG00000075083)	ENSDARG00000105779	abcf2b (ENSDARG00000052331)	CHPF2 (ENSDARG00000059961)	smarcd3b (ENSDARG00000019969)	NFX1 (ENSDARG00000105669)	plxdc2b (ENSDARG00000059950)	malrd1 (ENSDARG00000090618)
Characiphysae	ANCESTRAL SPECIES	88	ENSGT00940000159123.a	ENSGT00940000155121.nb	ENSGT00940000154242.b.g.a	ENSGT00940000154242.b.g.b	ENSGT00940000154516.a.b.l	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000164667.b.a.b	ENSGT01030000234518.E.d	ENSGT00940000154952.a.b	ENSGT00500000044852.a.a.b	ENSGT00940000155171.a.b.d	ENSGT00390000014771.a	ENSGT00940000156700.d	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000159813	ENSGT00930000151269	ENSGT00940000157697	ENSGT00940000157801	ENSGT00390000016567	ENSGT00940000158876	ENSGT00390000004208	ENSGT00390000005743	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a
Channel catfish	MODERN SPECIES	26	atp6v1h (ENSIPUG00000004257)	rgs20 (ENSIPUG00000004329)	tcea1 (ENSIPUG00000004352)	ENSIPUG00000004380	ENSIPUG00000004386	sec61g (ENSIPUG00000004392)	si:dkey-94e7.2 (ENSIPUG00000004399)	GPR141 (ENSIPUG00000004413)	ctnnd2 (ENSIPUG00000004430)	ANKRD33B (ENSIPUG00000004496)	ENSIPUG00000004504	march6 (ENSIPUG00000004528)	atpsckmt (ENSIPUG00000004628)	NETO1 (ENSIPUG00000004640)	puf60b (ENSIPUG00000004660) #21	scrib (ENSIPUG00000004763) #22	ENSIPUG00000005258	rgs9bp (ENSIPUG00000005293)	zgc:165532 (ENSIPUG00000005301)	dph2 (ENSIPUG00000005314)	ncf2 (ENSIPUG00000005331)	garem (ENSIPUG00000005369)	PRKDC (ENSIPUG00000005438)	Abcf2-1 (ENSIPUG00000005806)	chpf2 (ENSIPUG00000005872)	Smarcd3 (ENSIPUG00000005904)	NFX1 (ENSIPUG00000005961)	Plxdc2 (ENSIPUG00000006018)	malrd1 (ENSIPUG00000006079)	arl5b (ENSIPUG00000006168)	nsun6 (ENSIPUG00000006281)
Characiphysae_b	ANCESTRAL SPECIES	64	ENSGT00450000040296	ENSGT00550000074817.v	ENSGT00940000157341.g	ENSGT00390000003289	ENSGT00940000159123.a	ENSGT00940000155121.nb	ENSGT00940000154242.b.g.a	ENSGT00940000164667.b.a.b	ENSGT01030000234518.E.d	ENSGT00940000154952.a.b	ENSGT00500000044852.a.a.b	ENSGT00940000155171.a.b.d	ENSGT00390000014771.a	ENSGT00940000156700.d	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000164537	ENSGT00940000154574.d	ENSGT01060000248762	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT01050000244890.a.b.b.d ##17	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325
Electric eel	MODERN SPECIES	784											CXXC4 (ENSEEEG00000003514)	ENSEEEG00000003516	atpsckmt (ENSEEEG00000003517)	ENSEEEG00000003520	puf60b (ENSEEEG00000003587) #21	ENSEEEG00000003593 #22
Characoidei	ANCESTRAL SPECIES	107	ENSGT00450000040296	ENSGT00550000074817.v	ENSGT00940000157341.g	ENSGT00390000003289	ENSGT00940000159123.a	ENSGT00940000155121.nb	ENSGT00940000154242.b.g.a	ENSGT00940000164667.b.a.b	ENSGT01030000234518.E.d	ENSGT00940000154952.a.b	ENSGT00500000044852.a.a.b	ENSGT00940000155171.a.b.d	ENSGT00390000014771.a	ENSGT00940000156700.d	ENSGT00940000155594.c.b #21	ENSGT00940000154025.a #22	ENSGT00940000158533	ENSGT00940000153725.a.b.b	ENSGT00940000158957	ENSGT00940000153694.B	ENSGT00530000063843.b	ENSGT00530000063834.e.a	ENSGT00940000155633.D	ENSGT01050000244890.a.b.b.d ##17	ENSGT00630000089910	ENSGT01050000244857.B.a	ENSGT00940000158945.u.a	ENSGT00940000156325	ENSGT00440000033408.a.a	ENSGT00940000165597
Mexicana tetra	MODERN SPECIES	7	CHMP5 (ENSAMXG00000018188)	oprk1 (ENSAMXG00000018191)	atp6v1h (ENSAMXG00000018200)	rgs20 (ENSAMXG00000033141)	tcea1 (ENSAMXG00000018211)	ENSAMXG00000035867	si:dkey-94e7.2 (ENSAMXG00000018214)	GPR141 (ENSAMXG00000018220)	ctnnd2b (ENSAMXG00000018249)	ANKRD33B (ENSAMXG00000032907)	marchf6 (ENSAMXG00000018297)	atpsckmt (ENSAMXG00000018340)	ENSAMXG00000038634	NETO1 (ENSAMXG00000033045)	puf60b (ENSAMXG00000041030) #21	scrib (ENSAMXG00000018369) #22	KIF9 (ENSAMXG00000018424)	rgs9bp (ENSAMXG00000033894)	zgc:165532 (ENSAMXG00000037371)	ENSAMXG00000018498	trmt10b (ENSAMXG00000040010)	intu (ENSAMXG00000013548)	ino80b (ENSAMXG00000013592)	AADAT (ENSAMXG00000013572)	mfap3l (ENSAMXG00000035320)	ENSAMXG00000044096	CLCN3 (ENSAMXG00000013665)	ENSAMXG00000029265	nit1 (ENSAMXG00000036198)	pfdn2 (ENSAMXG00000040297)	ENSAMXG00000043301
Red-bellied piranha	MODERN SPECIES	364	myom1a (ENSPNAG00000018924)	bag1 (ENSPNAG00000018938)	CHMP5 (ENSPNAG00000018949)	oprk1 (ENSPNAG00000018958)	atp6v1h (ENSPNAG00000019013)	rgs20 (ENSPNAG00000019032)	tcea1 (ENSPNAG00000019078)	ENSPNAG00000019088	si:dkey-94e7.2 (ENSPNAG00000003575)	GPR141 (ENSPNAG00000003578)	ctnnd2b (ENSPNAG00000019191)	ANKRD33B (ENSPNAG00000019204)	marchf6 (ENSPNAG00000019342)	atpsckmt (ENSPNAG00000005847)	puf60b (ENSPNAG00000019415) #21	scrib (ENSPNAG00000019524) #22	ENSPNAG00000004863	rgs9bp (ENSPNAG00000019600)	zgc:165532 (ENSPNAG00000019617)	dph2 (ENSPNAG00000019641)	ncf2 (ENSPNAG00000003621)	garem (ENSPNAG00000020124)	PRKDC (ENSPNAG00000020574)	abcf2b (ENSPNAG00000006760)
Spotted gar	MODERN SPECIES	675	EXOG (ENSLOCG00000009933)	acvr2ba (ENSLOCG00000009939)	xylb (ENSLOCG00000009962)	ENSLOCG00000009971	NUB1 (ENSLOCG00000009978)	WDR86 (ENSLOCG00000009989)	crygn1 (ENSLOCG00000009994)	ENSLOCG00000010004	si:ch211-191a24.4 (ENSLOCG00000010018)	PHLPP1 (ENSLOCG00000010026)	ENSLOCG00000010044	si:ch211-106n13.3 (ENSLOCG00000010055)	ccr12a (ENSLOCG00000018131)	nrbp2b (ENSLOCG00000010069) #20	puf60b (ENSLOCG00000010106) #21	scrib (ENSLOCG00000010133) #22	KIF9 (ENSLOCG00000010165)	klhl18 (ENSLOCG00000010189)	zgc:195173 (ENSLOCG00000010204)	fastk (ENSLOCG00000010214)	ubtfl (ENSLOCG00000010224)	slc4a2b (ENSLOCG00000010245)	ENSLOCG00000010267	ttc19 (ENSLOCG00000010277)	DHX30 (ENSLOCG00000010283)	snx16 (ENSLOCG00000010309)	ENSLOCG00000010318	ATP6V0D2 (ENSLOCG00000010328)	WWP1 (ENSLOCG00000010335)	rmdn1 (ENSLOCG00000010345)	cpne3 (ENSLOCG00000010356)
Reedfish	MODERN SPECIES	14	ENSECRG00000011265	RHPN1 (ENSECRG00000011227)	ENSECRG00000011216	mafaa (ENSECRG00000011211) #37	ZC3H3 (ENSECRG00000011208) #36	ENSECRG00000011195	ENSECRG00000011189	ENSECRG00000011186	ENSECRG00000011182	ENSECRG00000011179	ENSECRG00000011177	ENSECRG00000011173	ENSECRG00000011166	nrbp2b (ENSECRG00000011150) #20	puf60b (ENSECRG00000011132) #21	scrib (ENSECRG00000011052) #22	KIF9 (ENSECRG00000010418)	DLEC1 (ENSECRG00000010253)	plcd1a (ENSECRG00000009825)	VILL (ENSECRG00000009711)	ctdsplb (ENSECRG00000009666)	ENSECRG00000009652	gars1 (ENSECRG00000009603)	hhatlb (ENSECRG00000009582)	klhl40b (ENSECRG00000009560)	ENSECRG00000009535	NKTR (ENSECRG00000009505)	SEC22C (ENSECRG00000009467)	vipr1b (ENSECRG00000009447)	ENSECRG00000009434	adcyap1r1a (ENSECRG00000009417)
Elephant shark	MODERN SPECIES	1571	ENSCMIG00000003441	ENSCMIG00000003427	ENSCMIG00000003414	ENSCMIG00000003412	scxa (ENSCMIG00000003407)	bop1 (ENSCMIG00000003286)	HSF1 (ENSCMIG00000003207)	dgat1b (ENSCMIG00000003198)	zgc:63863 (ENSCMIG00000003193)	scrt1a (ENSCMIG00000003189)	ENSCMIG00000003185	ENSCMIG00000003177	cpsf1 (ENSCMIG00000003147)	adck5 (ENSCMIG00000003134)	puf60b (ENSCMIG00000003067) #21	scrib (ENSCMIG00000003047) #22	ENSCMIG00000003043	ENSCMIG00000003042	zgc:91890 (ENSCMIG00000003014)	slc52a2 (ENSCMIG00000003004)	FBXL6 (ENSCMIG00000003001)	smpd5 (ENSCMIG00000002996) #14	ENSCMIG00000002991	ADARB2 (ENSCMIG00000002960)	wdr37 (ENSCMIG00000002862)	ENSCMIG00000002812	idi1 (ENSCMIG00000002805)	gtpbp4 (ENSCMIG00000002767)	ENSCMIG00000002730	DIP2C (ENSCMIG00000002448)	zmynd11 (ENSCMIG00000002301)
Gnathostomata	ANCESTRAL SPECIES	17	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00970000197581	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164076	ENSGT00940000159308	ENSGT00940000163557.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Euteleostomi	ANCESTRAL SPECIES	10	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Actinopterygii	ANCESTRAL SPECIES	33	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Neopterygii	ANCESTRAL SPECIES	3	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Osteoglossocephalai	ANCESTRAL SPECIES	50	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00940000155008.A	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064
Clupeocephala	ANCESTRAL SPECIES	47	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00940000155008.A	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064
Euteleosteomorpha	ANCESTRAL SPECIES	17	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Acanthomorphata	ANCESTRAL SPECIES	16	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00940000175945	ENSGT00940000161766	ENSGT00940000161927	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00940000175945	ENSGT00940000161766	ENSGT00940000161927	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Tiger tail seahorse	MODERN SPECIES	177	si:ch211-223p8.8 (ENSHCOG00000015978)	samd8 (ENSHCOG00000015976)	NPY4R2 (ENSHCOG00000015960)	mcph1 (ENSHCOG00000000446)	angpt2a (ENSHCOG00000015909)	agpat5 (ENSHCOG00000015885)	tmem14a (ENSHCOG00000015847)	ENSHCOG00000015841	CILK1 (ENSHCOG00000015836)	fbxo9 (ENSHCOG00000015820)	elovl5 (ENSHCOG00000015799)	gclc (ENSHCOG00000015775)	klhl31 (ENSHCOG00000015719)	ENSHCOG00000015695	ENSHCOG00000015689	lrrc1 (ENSHCOG00000015678) ##22	ENSHCOG00000015637	FAM83B (ENSHCOG00000015629)	hcrtr2 (ENSHCOG00000015610)	ENSHCOG00000015594	hmgcll1 (ENSHCOG00000015585)	bmp5 (ENSHCOG00000015515)	ENSHCOG00000014219	ENSHCOG00000014215	ENSHCOG00000014192	DST (ENSHCOG00000014139)	ENSHCOG00000014004 #19	ENSHCOG00000013995	ENSHCOG00000013937	bag2 (ENSHCOG00000013926)	rab23 (ENSHCOG00000013919)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000154526	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000154526	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Aplocheiloidei	ANCESTRAL SPECIES	89	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000178226	ENSGT00940000155008.C
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	23	si:ch211-223p8.8 (ENSKMAG00000018994)	samd8 (ENSKMAG00000019012)	ENSKMAG00000019049	ENSKMAG00000019067	mcph1 (ENSKMAG00000019083)	angpt2a (ENSKMAG00000019127)	agpat5 (ENSKMAG00000019154)	tmem14a (ENSKMAG00000019181)	ENSKMAG00000019195	CILK1 (ENSKMAG00000019324)	fbxo9 (ENSKMAG00000019345)	elovl5 (ENSKMAG00000019390)	gclc (ENSKMAG00000019436)	klhl31 (ENSKMAG00000019490)	ENSKMAG00000019504	lrrc1 (ENSKMAG00000019528) ##22	ENSKMAG00000019566	FAM83B (ENSKMAG00000019582)	hcrtr2 (ENSKMAG00000019606)	ENSKMAG00000019634	hmgcll1 (ENSKMAG00000019656)	bmp5 (ENSKMAG00000019675)	COL21A1 (ENSKMAG00000019701)	ENSKMAG00000019728	DST (ENSKMAG00000019787)	ENSKMAG00000019928	ENSKMAG00000019939	ENSKMAG00000019957	ENSKMAG00000019992	echs1 (ENSKMAG00000020016)	sprn (ENSKMAG00000020033)
Mangrove rivulus	MODERN SPECIES	22	ENSKMAG00000009435	msi2a (ENSKMAG00000009494)	ENSKMAG00000009710	KSR1 (ENSKMAG00000009749)	VEZF1 (ENSKMAG00000009800)	ENSKMAG00000009815	ENSKMAG00000009874	SEZ6 (ENSKMAG00000010135)	lhx1b (ENSKMAG00000010158)	acaca (ENSKMAG00000010202)	tbx2a (ENSKMAG00000010328)	ppm1db (ENSKMAG00000010343)	ROBO1 (ENSKMAG00000010382)	ENSKMAG00000010481	PCDH1 (ENSKMAG00000010555)	ENSKMAG00000010578 ##22	ENSKMAG00000010596	ENSKMAG00000010613	PCDHAC2 (ENSKMAG00000010638)	ENSKMAG00000010648	HRH2 (ENSKMAG00000010662)	kcnip1b (ENSKMAG00000010676)	npm1a (ENSKMAG00000010709)	cldn7b (ENSKMAG00000010737)	ENSKMAG00000010766	ENSKMAG00000010787	ENSKMAG00000010799	nlgn2b (ENSKMAG00000010837)	ENSKMAG00000010875	kdm6bb (ENSKMAG00000010892)	tmem88a (ENSKMAG00000010911)
Turquoise killifish	MODERN SPECIES	83									CILK1 (ENSNFUG00015019035)	FBXO9 (ENSNFUG00015019061)	ELOVL5 (ENSNFUG00015019515)	ENSNFUG00015019519	GCLC (ENSNFUG00015019584)	klhl31 (ENSNFUG00015020900)	ENSNFUG00015012631	LRRC1 (ENSNFUG00015012649) ##22	ENSNFUG00015012706	ENSNFUG00015012720
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000154526	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
NAME_6	ANCESTRAL SPECIES	25	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00940000174758	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Sailfin molly	MODERN SPECIES	67	si:ch211-223p8.8 (ENSPLAG00000012489)	samd8 (ENSPLAG00000012472)	ENSPLAG00000012449	ENSPLAG00000012440	mcph1 (ENSPLAG00000012423)	angpt2a (ENSPLAG00000012405)	agpat5 (ENSPLAG00000012353)	tmem14a (ENSPLAG00000012335)	ENSPLAG00000012324	CILK1 (ENSPLAG00000012293)	fbxo9 (ENSPLAG00000012284)	elovl5 (ENSPLAG00000012243)	gclc (ENSPLAG00000012224)	klhl31 (ENSPLAG00000012169)	ENSPLAG00000012149	lrrc1 (ENSPLAG00000012139) ##22	FAM83B (ENSPLAG00000012096)	hcrtr2 (ENSPLAG00000012075)	hmgcll1 (ENSPLAG00000012047)	bmp5 (ENSPLAG00000012022)	ENSPLAG00000011996	ENSPLAG00000011970	DST (ENSPLAG00000011909)	ENSPLAG00000011731 #19	ENSPLAG00000011721	bag2 (ENSPLAG00000011709)	rab23 (ENSPLAG00000011697)	prim2 (ENSPLAG00000011677)
Amazon molly	MODERN SPECIES	267	ENSPFOG00000008437	ENSPFOG00000008476	samd8 (ENSPFOG00000008498)	ENSPFOG00000008543	mcph1 (ENSPFOG00000008566)	angpt2a (ENSPFOG00000008708)	agpat5 (ENSPFOG00000008810)	tmem14a (ENSPFOG00000008942)	ENSPFOG00000008946	CILK1 (ENSPFOG00000008953)	fbxo9 (ENSPFOG00000009112)	elovl5 (ENSPFOG00000009242)	gclc (ENSPFOG00000009252)	klhl31 (ENSPFOG00000009567)	ENSPFOG00000023644	lrrc1 (ENSPFOG00000009602) ##22	ENSPFOG00000023420	FAM83B (ENSPFOG00000009755)	hcrtr2 (ENSPFOG00000009773)	ENSPFOG00000023068	hmgcll1 (ENSPFOG00000009879)	bmp5 (ENSPFOG00000009884)	COL21A1 (ENSPFOG00000009889)	DST (ENSPFOG00000010186)	ENSPFOG00000011368	bag2 (ENSPFOG00000023349)	rab23 (ENSPFOG00000011493)	prim2 (ENSPFOG00000011520)	khdrbs2 (ENSPFOG00000011638)	ENSPFOG00000011772	PHF3 (ENSPFOG00000011817)
Guppy	MODERN SPECIES	445	si:ch211-223p8.8 (ENSPREG00000022017)	samd8 (ENSPREG00000022023)	ENSPREG00000022034	ENSPREG00000022041	mcph1 (ENSPREG00000022045)	angpt2a (ENSPREG00000022052)	agpat5 (ENSPREG00000022065)	tmem14a (ENSPREG00000022069)	ENSPREG00000022076	CILK1 (ENSPREG00000022112)	fbxo9 (ENSPREG00000022132)	elovl5 (ENSPREG00000022151)	gclc (ENSPREG00000022164)	klhl31 (ENSPREG00000022172)	ENSPREG00000022174	lrrc1 (ENSPREG00000022184) ##22	ENSPREG00000022205	FAM83B (ENSPREG00000022212)	hcrtr2 (ENSPREG00000022219)	ENSPREG00000022226	hmgcll1 (ENSPREG00000022242)	bmp5 (ENSPREG00000022262)	COL21A1 (ENSPREG00000022284)	ENSPREG00000022322	DST (ENSPREG00000022366)	ENSPREG00000022482 #19	ENSPREG00000022486	ENSPREG00000022490	ENSPREG00000022498	bag2 (ENSPREG00000022504)	rab23 (ENSPREG00000022509)
Platyfish	MODERN SPECIES	14	si:ch211-223p8.8 (ENSXMAG00000010397)	samd8 (ENSXMAG00000010390)	ENSXMAG00000021237	angpt2a (ENSXMAG00000010360)	mcph1 (ENSXMAG00000010331)	agpat5 (ENSXMAG00000010319)	ENSXMAG00000010307	tmem14a (ENSXMAG00000024093)	CILK1 (ENSXMAG00000010285)	fbxo9 (ENSXMAG00000010262)	elovl5 (ENSXMAG00000010261)	gclc (ENSXMAG00000010230)	ENSXMAG00000022814	klhl31 (ENSXMAG00000000224)	ENSXMAG00000022533	lrrc1 (ENSXMAG00000010214) ##22	ENSXMAG00000022880	FAM83B (ENSXMAG00000010212)	hcrtr2 (ENSXMAG00000010192)	hmgcll1 (ENSXMAG00000010176)	bmp5 (ENSXMAG00000025549)	COL21A1 (ENSXMAG00000000323)	ENSXMAG00000027263	DST (ENSXMAG00000009287)	ENSXMAG00000023523	ENSXMAG00000009375	bag2 (ENSXMAG00000009382)	rab23 (ENSXMAG00000009387)	prim2 (ENSXMAG00000009396)	khdrbs2 (ENSXMAG00000009415)	ENSXMAG00000009420
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000154526	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C.yd.b	ENSGT00940000159045 #19	ENSGT00940000155008.C.yd.a	ENSGT00940000155008.C.`e	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064
Sheepshead minnow	MODERN SPECIES	216	si:ch211-223p8.8 (ENSCVAG00000019347)	samd8 (ENSCVAG00000019384)	ENSCVAG00000019399	ENSCVAG00000019407	angpt2a (ENSCVAG00000019417)	ENSCVAG00000019423	agpat5 (ENSCVAG00000019452)	ENSCVAG00000019462	tmem14a (ENSCVAG00000000951)	CILK1 (ENSCVAG00000019495)	fbxo9 (ENSCVAG00000019503)	elovl5 (ENSCVAG00000019516)	gclc (ENSCVAG00000019620)	klhl31 (ENSCVAG00000019634)	ENSCVAG00000019712	lrrc1 (ENSCVAG00000019766) ##22	ENSCVAG00000019777	FAM83B (ENSCVAG00000019795)	hcrtr2 (ENSCVAG00000019834)	ENSCVAG00000019849	hmgcll1 (ENSCVAG00000019876)	bmp5 (ENSCVAG00000019901)	ENSCVAG00000019932	ENSCVAG00000020089	DST (ENSCVAG00000020365)	ENSCVAG00000020450	ENSCVAG00000000853	bag2 (ENSCVAG00000020475)	rab23 (ENSCVAG00000020501)	prim2 (ENSCVAG00000020538)	khdrbs2 (ENSCVAG00000020560)
Mummichog	MODERN SPECIES	320	si:ch211-223p8.8 (ENSFHEG00000008331)	samd8 (ENSFHEG00000008366)	ENSFHEG00000008385	ENSFHEG00000008406	angpt2a (ENSFHEG00000008418)	mcph1 (ENSFHEG00000008430)	agpat5 (ENSFHEG00000008481)	tmem14a (ENSFHEG00000008535)	ENSFHEG00000008529	CILK1 (ENSFHEG00000008559)	fbxo9 (ENSFHEG00000008613)	elovl5 (ENSFHEG00000008649)	gclc (ENSFHEG00000008706)	klhl31 (ENSFHEG00000008714)	ENSFHEG00000008724	ENSFHEG00000008739 ##22	ENSFHEG00000008757	ENSFHEG00000008777	FAM83B (ENSFHEG00000008806)	hcrtr2 (ENSFHEG00000008839)
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000159045 #19	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000166866.g	ENSGT00940000166866.h	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000155080
Javanese ricefish	MODERN SPECIES	6	si:ch211-223p8.8 (ENSOJAG00000005410)	samd8 (ENSOJAG00000005417)	ENSOJAG00000005436	npy4r (ENSOJAG00000005444)	mcph1 (ENSOJAG00000005453)	angpt2a (ENSOJAG00000005472)	agpat5 (ENSOJAG00000005509)	tmem14a (ENSOJAG00000005522)	ENSOJAG00000005529	CILK1 (ENSOJAG00000005567)	fbxo9 (ENSOJAG00000005596)	elovl5 (ENSOJAG00000006151)	gclc (ENSOJAG00000006175)	klhl31 (ENSOJAG00000006266)	ENSOJAG00000006278	lrrc1 (ENSOJAG00000006293) ##22	ENSOJAG00000006406	FAM83B (ENSOJAG00000006474)	hcrtr2 (ENSOJAG00000006524)	hmgcll1 (ENSOJAG00000006567)	bmp5 (ENSOJAG00000006911)	COL21A1 (ENSOJAG00000006964)	ENSOJAG00000007005	ENSOJAG00000013369	ENSOJAG00000013387	bag2 (ENSOJAG00000013407)	rab23 (ENSOJAG00000013410)	zgc:172121 (ENSOJAG00000013438)	ENSOJAG00000013447	rab23 (ENSOJAG00000013466)	prim2 (ENSOJAG00000013486)
Indian medaka	MODERN SPECIES	27	si:ch211-223p8.8 (ENSOMEG00000002121)	ENSOMEG00000002111	samd8 (ENSOMEG00000002104)	npy4r (ENSOMEG00000002100)	mcph1 (ENSOMEG00000002092)	angpt2a (ENSOMEG00000000027)	agpat5 (ENSOMEG00000002079)	ENSOMEG00000002064	tmem14a (ENSOMEG00000002070)	CILK1 (ENSOMEG00000002052)	fbxo9 (ENSOMEG00000002039)	elovl5 (ENSOMEG00000002023)	gclc (ENSOMEG00000002010)	klhl31 (ENSOMEG00000001997)	ENSOMEG00000001989	lrrc1 (ENSOMEG00000001974) ##22	ENSOMEG00000001960	FAM83B (ENSOMEG00000001954)	hcrtr2 (ENSOMEG00000000962)	hmgcll1 (ENSOMEG00000001941)	bmp5 (ENSOMEG00000000017)	ENSOMEG00000001771	ENSOMEG00000001765	ENSOMEG00000001754	ENSOMEG00000001745	ENSOMEG00000001735	ENSOMEG00000001721	ENSOMEG00000001717	bag2 (ENSOMEG00000001713)	rab23 (ENSOMEG00000001706)	prim2 (ENSOMEG00000001695)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000166490.b	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000155080	ENSGT00940000165329
Chinese medaka	MODERN SPECIES	1045	si:ch211-223p8.8 (ENSOSIG00000010543)	samd8 (ENSOSIG00000010542)	npy4r (ENSOSIG00000010540)	ENSOSIG00000010539	angpt2a (ENSOSIG00000010536)	ENSOSIG00000010534	agpat5 (ENSOSIG00000010532)	tmem14a (ENSOSIG00000010518)	ENSOSIG00000010511	CILK1 (ENSOSIG00000010509)	fbxo9 (ENSOSIG00000010460)	elovl5 (ENSOSIG00000010457)	gclc (ENSOSIG00000010376)	klhl31 (ENSOSIG00000010363)	ENSOSIG00000010362	lrrc1 (ENSOSIG00000010336) ##22	ENSOSIG00000010330	FAM83B (ENSOSIG00000010326)	hcrtr2 (ENSOSIG00000010323)	hmgcll1 (ENSOSIG00000008865)	bmp5 (ENSOSIG00000008863)	COL21A1 (ENSOSIG00000008862)	ENSOSIG00000008858
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000028720	si:ch211-223p8.8 (ENSORLG00000009517)	ENSORLG00000009526	npy4r (ENSORLG00000009534)	ENSORLG00000009570	angpt2a (ENSORLG00000009631)	agpat5 (ENSORLG00000009650)	ENSORLG00000009674	tmem14a (ENSORLG00000022220)	CILK1 (ENSORLG00000009721)	fbxo9 (ENSORLG00000009741)	elovl5 (ENSORLG00000009752)	gclc (ENSORLG00000009800)	klhl31 (ENSORLG00000009811)	ENSORLG00000009820	lrrc1 (ENSORLG00000009846) ##22	ENSORLG00000025665	FAM83B (ENSORLG00000009856)	hcrtr2 (ENSORLG00000009860)	ENSORLG00000028047	hmgcll1 (ENSORLG00000009884)	bmp5 (ENSORLG00000009907)	COL21A1 (ENSORLG00000009951)	ENSORLG00000029293	ENSORLG00000027191	ENSORLG00000026707	ENSORLG00000028183	ENSORLG00000026916	ENSORLG00000023330 #19	ENSORLG00000026233	ENSORLG00000021839
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000159045 #19	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Amphiprion	ANCESTRAL SPECIES	182										ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000159045 #19	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Clown anemonefish	MODERN SPECIES	667										CILK1 (ENSAOCG00000013556)	fbxo9 (ENSAOCG00000013611)	elovl5 (ENSAOCG00000013636)	gclc (ENSAOCG00000013685)	klhl31 (ENSAOCG00000013699)	ENSAOCG00000013719	lrrc1 (ENSAOCG00000013787) ##22	ENSAOCG00000013825
Orange clownfish	MODERN SPECIES	12	cxcl12a (ENSAPEG00000017057)	tmem72 (ENSAPEG00000017064)	ENSAPEG00000017079	rassf4a (ENSAPEG00000017096)	ENSAPEG00000017128	ENSAPEG00000017139	PAOX (ENSAPEG00000017154)	mtg1 (ENSAPEG00000017169)	sprn (ENSAPEG00000017228)	echs1 (ENSAPEG00000017236)	CILK1 (ENSAPEG00000017273)	fbxo9 (ENSAPEG00000017305)	elovl5 (ENSAPEG00000017355)	gclc (ENSAPEG00000017377)	klhl31 (ENSAPEG00000017437)	lrrc1 (ENSAPEG00000017476) ##22	ENSAPEG00000017559	FAM83B (ENSAPEG00000017607)	hcrtr2 (ENSAPEG00000017641)	ENSAPEG00000017679	hmgcll1 (ENSAPEG00000017717)	bmp5 (ENSAPEG00000017827)	COL21A1 (ENSAPEG00000018798)	ENSAPEG00000018853	DST (ENSAPEG00000018969)	ENSAPEG00000019471 #19	ENSAPEG00000019500	ENSAPEG00000019729	bag2 (ENSAPEG00000019744)	rab23 (ENSAPEG00000019758)	prim2 (ENSAPEG00000019792)
Spiny chromis	MODERN SPECIES	1170											elovl5 (ENSAPOG00000020515)	gclc (ENSAPOG00000020613)	klhl31 (ENSAPOG00000020623)	ENSAPOG00000000593	ENSAPOG00000020866	lrrc1 (ENSAPOG00000020902) ##22	ENSAPOG00000020917	FAM83B (ENSAPOG00000020960)	hcrtr2 (ENSAPOG00000021005)	GFRAL (ENSAPOG00000021020)
Bicolor damselfish	MODERN SPECIES	1453	ENSSPAG00000006707	si:ch211-223p8.8 (ENSSPAG00000006698)	samd8 (ENSSPAG00000006653)	ENSSPAG00000006630	npy4r (ENSSPAG00000006620)	angpt2a (ENSSPAG00000006596)	mcph1 (ENSSPAG00000006557)	agpat5 (ENSSPAG00000006524)	tmem14a (ENSSPAG00000006497)	ENSSPAG00000006481	CILK1 (ENSSPAG00000006434)	fbxo9 (ENSSPAG00000006387)	elovl5 (ENSSPAG00000006359)	gclc (ENSSPAG00000006317)	klhl31 (ENSSPAG00000006305)	lrrc1 (ENSSPAG00000006282) ##22	ENSSPAG00000006262	FAM83B (ENSSPAG00000006245)	hcrtr2 (ENSSPAG00000006234)	ENSSPAG00000006219	hmgcll1 (ENSSPAG00000006201)
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750.ad	ENSGT00940000154526	ENSGT00940000163367	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000161750.ad	ENSGT00940000158206	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750.ad	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750.ad	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C.od.b	ENSGT00940000178226	ENSGT00940000155008.C.od.a	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750.ad	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C.od.b	ENSGT00940000178226	ENSGT00940000162855.a.a.b	ENSGT00940000155008.C.od.a	ENSGT00940000155008.C.pd	ENSGT00940000166866	ENSGT00390000017590
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750.ad	ENSGT00940000161750.bd	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C.od.b	ENSGT00940000178226	ENSGT00940000162855.a.a.b	ENSGT00940000155008.C.od.a	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064
Eastern happy	MODERN SPECIES	4	samd8 (ENSACLG00000006133)	ENSACLG00000006116	npy4r (ENSACLG00000006106)	ENSACLG00000006078	angpt2a (ENSACLG00000006060)	agpat5 (ENSACLG00000006035)	ENSACLG00000006026	tmem14a (ENSACLG00000005994)	ENSACLG00000005973	CILK1 (ENSACLG00000005939)	fbxo9 (ENSACLG00000005907)	elovl5 (ENSACLG00000003996)	gclc (ENSACLG00000003922)	klhl31 (ENSACLG00000003906)	ENSACLG00000003879	lrrc1 (ENSACLG00000003820) ##22	ENSACLG00000003744	FAM83B (ENSACLG00000003681)	ENSACLG00000003667	ENSACLG00000003660	hcrtr2 (ENSACLG00000003616)	ENSACLG00000003609	hmgcll1 (ENSACLG00000003582)	COL21A1 (ENSACLG00000003445)	ENSACLG00000003320	ENSACLG00000003170	DST (ENSACLG00000002930)	ENSACLG00000002874	ENSACLG00000002867	bag2 (ENSACLG00000002862)	rab23 (ENSACLG00000002819)
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005004355	si:ch211-223p8.8 (ENSMZEG00005004363)	samd8 (ENSMZEG00005004367)	ENSMZEG00005004387	NPY4R2 (ENSMZEG00005004403)	ENSMZEG00005004418	angpt2a (ENSMZEG00005004430)	agpat5 (ENSMZEG00005004460)	tmem14a (ENSMZEG00005004470)	ENSMZEG00005004480	ENSMZEG00005004494	CILK1 (ENSMZEG00005004516)	fbxo9 (ENSMZEG00005004531)	elovl5 (ENSMZEG00005004560)	gclc (ENSMZEG00005004585)	lrrc1 (ENSMZEG00005004658) ##22	ENSMZEG00005004826	FAM83B (ENSMZEG00005004845)	hcrtr2 (ENSMZEG00005004873)	ENSMZEG00005004888	hmgcll1 (ENSMZEG00005004894)	bmp5 (ENSMZEG00005004912)	COL21A1 (ENSMZEG00005004930)	ENSMZEG00005004991	DST (ENSMZEG00005005104)	ENSMZEG00005005273	ENSMZEG00005005302	ENSMZEG00005005406	bag2 (ENSMZEG00005005424)	rab23 (ENSMZEG00005005441)	prim2 (ENSMZEG00005005468)
P. nyererei	MODERN SPECIES	368	samd8 (ENSPNYG00000021016)	ENSPNYG00000021003	npy4r (ENSPNYG00000020969)	angpt2a (ENSPNYG00000020956)	mcph1 (ENSPNYG00000020931)	agpat5 (ENSPNYG00000020921)	ENSPNYG00000020910	tmem14a (ENSPNYG00000020902)	ENSPNYG00000020875	CILK1 (ENSPNYG00000020866)	fbxo9 (ENSPNYG00000020840)	elovl5 (ENSPNYG00000020821)	gclc (ENSPNYG00000020777)	klhl31 (ENSPNYG00000020773)	ENSPNYG00000020760	lrrc1 (ENSPNYG00000020718) ##22	ENSPNYG00000020678	FAM83B (ENSPNYG00000020645)	hcrtr2 (ENSPNYG00000020624)	ENSPNYG00000020602	hmgcll1 (ENSPNYG00000020585)	bmp5 (ENSPNYG00000020142)	ENSPNYG00000020032	ENSPNYG00000019973	ENSPNYG00000019958	DST (ENSPNYG00000019767)	ENSPNYG00000019719	ENSPNYG00000019685	bag2 (ENSPNYG00000019660)	rab23 (ENSPNYG00000019639)	prim2 (ENSPNYG00000019599)
Burton s mouthbrooder	MODERN SPECIES	279						ENSHBUG00000000163	tmem14a (ENSHBUG00000006478)	ENSHBUG00000006496	ENSHBUG00000006513	CILK1 (ENSHBUG00000006531)	fbxo9 (ENSHBUG00000006575)	elovl5 (ENSHBUG00000006602)	gclc (ENSHBUG00000006667)	klhl31 (ENSHBUG00000006682)	ENSHBUG00000006701	lrrc1 (ENSHBUG00000006764) ##22	ENSHBUG00000006802	FAM83B (ENSHBUG00000006835)	hcrtr2 (ENSHBUG00000006873)	ENSHBUG00000006889	hmgcll1 (ENSHBUG00000006918)	bmp5 (ENSHBUG00000006931)	COL21A1 (ENSHBUG00000006981)	ENSHBUG00000007047	DST (ENSHBUG00000000768)	ENSHBUG00000007487	ENSHBUG00000007846	ENSHBUG00000007881	ENSHBUG00000007926	bag2 (ENSHBUG00000007943)	rab23 (ENSHBUG00000007966)
Lyretail cichlid	MODERN SPECIES	364	ENSNBRG00000011907	samd8 (ENSNBRG00000011938)	ENSNBRG00000011958	npy4r (ENSNBRG00000011977)	mcph1 (ENSNBRG00000011991)	angpt2a (ENSNBRG00000012023)	agpat5 (ENSNBRG00000012056)	tmem14a (ENSNBRG00000012082)	ENSNBRG00000012087	ENSNBRG00000012101	CILK1 (ENSNBRG00000012112)	fbxo9 (ENSNBRG00000012153)	elovl5 (ENSNBRG00000012198)	gclc (ENSNBRG00000012226)	klhl31 (ENSNBRG00000012274)	lrrc1 (ENSNBRG00000012284) ##22	ENSNBRG00000012313	FAM83B (ENSNBRG00000012329)	hcrtr2 (ENSNBRG00000012348)	ENSNBRG00000012368	hmgcll1 (ENSNBRG00000012384)	bmp5 (ENSNBRG00000012531)	ENSNBRG00000013090	ENSNBRG00000013148	ENSNBRG00000013167	DST (ENSNBRG00000013245)	ENSNBRG00000013534	ENSNBRG00000013620	bag2 (ENSNBRG00000013637)	rab23 (ENSNBRG00000013691)	prim2 (ENSNBRG00000013728)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000031247	ENSONIG00000030006	mcph1 (ENSONIG00000037268)	angpt2 (ENSONIG00000009668)	agpat5 (ENSONIG00000009672)	tmem14a (ENSONIG00000009675)	gsta (ENSONIG00000030580)	ENSONIG00000009676	ENSONIG00000029640	CILK1 (ENSONIG00000009686)	elovl5 (ENSONIG00000009696)	ENSONIG00000039712	gclc (ENSONIG00000009700)	klhl31 (ENSONIG00000009705)	ENSONIG00000009707	lrrc1 (ENSONIG00000009708) ##22	ENSONIG00000040749	ENSONIG00000042530	ENSONIG00000035692	hcrtr2 (ENSONIG00000009721)	ENSONIG00000009723	hmgcll1 (ENSONIG00000009724)	bmp5 (ENSONIG00000009726)	COL21A1 (ENSONIG00000009732)	ENSONIG00000036087	DST (ENSONIG00000009736)	ENSONIG00000009746	bag2 (ENSONIG00000009748)	rab23 (ENSONIG00000009749)	prim2 (ENSONIG00000009753)	khdrbs2 (ENSONIG00000009755)
Midas cichlid	MODERN SPECIES	1196	samd8 (ENSACIG00000017115)	ENSACIG00000017128	npy4r (ENSACIG00000017147)	mcph1 (ENSACIG00000017218)	angpt2a (ENSACIG00000017245)	agpat5 (ENSACIG00000017267)	ENSACIG00000017317	tmem14a (ENSACIG00000018081)	ENSACIG00000018113	ENSACIG00000018370	fbxo9 (ENSACIG00000018389)	elovl5 (ENSACIG00000018466)	gclc (ENSACIG00000019458)	klhl31 (ENSACIG00000019481)	ENSACIG00000019486	lrrc1 (ENSACIG00000019502) ##22	FAM83B (ENSACIG00000019530)	hcrtr2 (ENSACIG00000019544)	ENSACIG00000019580	hmgcll1 (ENSACIG00000019592)	bmp5 (ENSACIG00000019714)	ENSACIG00000020264	ENSACIG00000020293	DST (ENSACIG00000020343)	ENSACIG00000020473 #19	ENSACIG00000020477	ENSACIG00000020481	bag2 (ENSACIG00000020492)	rab23 (ENSACIG00000020496)	prim2 (ENSACIG00000020504)	khdrbs2 (ENSACIG00000020525)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Carangaria_A	ANCESTRAL SPECIES	29	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Seriola	ANCESTRAL SPECIES	14	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000159045 #19	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Yellowtail amberjack	MODERN SPECIES	2790	si:ch211-223p8.8 (ENSSLDG00000001672)	samd8 (ENSSLDG00000001625)	ENSSLDG00000001603	ENSSLDG00000001594	angpt2a (ENSSLDG00000001541)	mcph1 (ENSSLDG00000001522)	agpat5 (ENSSLDG00000001467)	ENSSLDG00000001369	tmem14a (ENSSLDG00000001415)	CILK1 (ENSSLDG00000001352)	fbxo9 (ENSSLDG00000001273)	elovl5 (ENSSLDG00000001241)	gclc (ENSSLDG00000001177)	klhl31 (ENSSLDG00000001147)	ENSSLDG00000001102	lrrc1 (ENSSLDG00000001031) ##22	ENSSLDG00000001014	FAM83B (ENSSLDG00000000986)	hcrtr2 (ENSSLDG00000000943)	ENSSLDG00000000927	hmgcll1 (ENSSLDG00000000861)	bmp5 (ENSSLDG00000000843)	COL21A1 (ENSSLDG00000000777)	ENSSLDG00000000584	ENSSLDG00000000557 #19	DST (ENSSLDG00000000465)	ENSSLDG00000000429	bag2 (ENSSLDG00000000325)	rab23 (ENSSLDG00000000287)	prim2 (ENSSLDG00000000196)
Greater amberjack	MODERN SPECIES	9	si:ch211-223p8.8 (ENSSDUG00000023197)	samd8 (ENSSDUG00000023198)	ENSSDUG00000023202	npy4r (ENSSDUG00000023203)	mcph1 (ENSSDUG00000023206)	angpt2a (ENSSDUG00000023215)	agpat5 (ENSSDUG00000023219)	tmem14a (ENSSDUG00000023222)	ENSSDUG00000023227	CILK1 (ENSSDUG00000023237)	fbxo9 (ENSSDUG00000023242)	elovl5 (ENSSDUG00000023245)	gclc (ENSSDUG00000023251)	klhl31 (ENSSDUG00000023258)	ENSSDUG00000023260	lrrc1 (ENSSDUG00000023264) ##22	FAM83B (ENSSDUG00000023285)	hcrtr2 (ENSSDUG00000023289)	ENSSDUG00000023291	hmgcll1 (ENSSDUG00000023293)	bmp5 (ENSSDUG00000023315)	ENSSDUG00000023446	ENSSDUG00000023450	DST (ENSSDUG00000023466)	ENSSDUG00000023490 #19	ENSSDUG00000023493	ENSSDUG00000023502	bag2 (ENSSDUG00000023506)	rab23 (ENSSDUG00000023508)	prim2 (ENSSDUG00000023514)	khdrbs2 (ENSSDUG00000023520)
Barramundi perch	MODERN SPECIES	462	si:ch211-223p8.8 (ENSLCAG00010014262)	samd8 (ENSLCAG00010014264)	ENSLCAG00010014267	ENSLCAG00010014268	mcph1 (ENSLCAG00010014271)	angpt2a (ENSLCAG00010014277)	agpat5 (ENSLCAG00010014281)	tmem14a (ENSLCAG00010014285)	ENSLCAG00010014288	CILK1 (ENSLCAG00010014296)	fbxo9 (ENSLCAG00010014303)	elovl5 (ENSLCAG00010014356)	gclc (ENSLCAG00010014368)	klhl31 (ENSLCAG00010014373)	ENSLCAG00010014375	lrrc1 (ENSLCAG00010014382) ##22
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119
Turbot	MODERN SPECIES	6	adka (ENSSMAG00000005234)	ENSSMAG00000005313	dusp13a (ENSSMAG00000005275)	ENSSMAG00000005324	si:ch211-223p8.8 (ENSSMAG00000005333)	ENSSMAG00000005340	ENSSMAG00000030036	ENSSMAG00000005347	MCPH1 (ENSSMAG00000005371)	angpt2a (ENSSMAG00000005390)	AGPAT5 (ENSSMAG00000005420)	TMEM14A (ENSSMAG00000030592)	ENSSMAG00000005453	CILK1 (ENSSMAG00000005490)	fbxo9 (ENSSMAG00000005528)	LRRC1 (ENSSMAG00000005697) ##22	ELO (ENSSMAG00000005574)	gclc (ENSSMAG00000005620)	klhl31 (ENSSMAG00000005670)	ENSSMAG00000005685	ENSSMAG00000030442	FAM83B (ENSSMAG00000005786)	hcrtr2 (ENSSMAG00000005815)	ENSSMAG00000005837	hmgcll1 (ENSSMAG00000005868)	bmp5 (ENSSMAG00000005900)	COL21A1 (ENSSMAG00000005940)	ENSSMAG00000006023	DST (ENSSMAG00000006086)	ENSSMAG00000006276	bag2 (ENSSMAG00000006318)
Tongue sole	MODERN SPECIES	3	ENSCSEG00000009191	samd8 (ENSCSEG00000009201)	ENSCSEG00000009230	npy4r (ENSCSEG00000009235)	MCPH1 (ENSCSEG00000009244)	angpt2a (ENSCSEG00000009256)	agpat5 (ENSCSEG00000009278)	tmem14a (ENSCSEG00000009295)	ENSCSEG00000009308	CILK1 (ENSCSEG00000009332)	fbxo9 (ENSCSEG00000009347)	elovl5 (ENSCSEG00000009416)	gclc (ENSCSEG00000010087)	klhl31 (ENSCSEG00000010132)	ENSCSEG00000010142	lrrc1 (ENSCSEG00000010169) ##22	ENSCSEG00000010210	FAM83B (ENSCSEG00000010249)	hcrtr2 (ENSCSEG00000010260)	ENSCSEG00000010281	hmgcll1 (ENSCSEG00000010305)	bmp5 (ENSCSEG00000010319)	ENSCSEG00000010337	ENSCSEG00000010346	ENSCSEG00000010370	DST (ENSCSEG00000010408)	ENSCSEG00000010504 #19	ENSCSEG00000010510	ENSCSEG00000010517	ENSCSEG00000010531	bag2 (ENSCSEG00000010555)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161927	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000005372	ENSMAMG00000005281	ENSMAMG00000005378	ENSMAMG00000005393	MCPH1 (ENSMAMG00000005407)	angpt2a (ENSMAMG00000005424)	AGPAT5 (ENSMAMG00000005452)	TMEM14A (ENSMAMG00000008883)	ENSMAMG00000005498	CILK1 (ENSMAMG00000008902)	fbxo9 (ENSMAMG00000025413)	elovl5 (ENSMAMG00000008979)	gclc (ENSMAMG00000009010)	klhl31 (ENSMAMG00000009085)	ENSMAMG00000027328	lrrc1 (ENSMAMG00000009122) ##22	ENSMAMG00000009181	FAM83B (ENSMAMG00000009194)	hcrtr2 (ENSMAMG00000009200)	ENSMAMG00000009219	hmgcll1 (ENSMAMG00000009231)	bmp5 (ENSMAMG00000009291)	COL21A1 (ENSMAMG00000014622)	ENSMAMG00000014689	DST (ENSMAMG00000014762)	ENSMAMG00000015375	bag2 (ENSMAMG00000015403)	rab23 (ENSMAMG00000015456)	PRIM2 (ENSMAMG00000015490)	KHDRBS2 (ENSMAMG00000015552)	ENSMAMG00000015579
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161927	ENSGT00940000161766	ENSGT00940000158430	ENSGT00390000018842	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Siamese fighting fish	MODERN SPECIES	6	ENSBSLG00000025092	si:ch211-223p8.8 (ENSBSLG00000025091)	samd8 (ENSBSLG00000025090)	npy4r (ENSBSLG00000025088)	angpt2a (ENSBSLG00000025081)	mcph1 (ENSBSLG00000025070)	agpat5 (ENSBSLG00000025059)	tmem14a (ENSBSLG00000025051)	ENSBSLG00000025048	CILK1 (ENSBSLG00000025042)	fbxo9 (ENSBSLG00000025014)	elovl5 (ENSBSLG00000025005)	gclc (ENSBSLG00000024889)	klhl31 (ENSBSLG00000024870)	ENSBSLG00000024842	lrrc1 (ENSBSLG00000024698) ##22	ENSBSLG00000024689	ENSBSLG00000024685	hcrtr2 (ENSBSLG00000024683)	ENSBSLG00000024675	hmgcll1 (ENSBSLG00000024466)	bmp5 (ENSBSLG00000024253)	COL21A1 (ENSBSLG00000024249)	ENSBSLG00000024246	ENSBSLG00000023798	bag2 (ENSBSLG00000023796)	rab23 (ENSBSLG00000023795)	ENSBSLG00000023794	ENSBSLG00000023593	kcnk1b (ENSBSLG00000023556)	SLC35F3 (ENSBSLG00000023470)
Climbing perch	MODERN SPECIES	6	ENSATEG00000021749	ENSATEG00000021729	ENSATEG00000021718	ENSATEG00000021686	angpt2a (ENSATEG00000021660)	ENSATEG00000021639	agpat5 (ENSATEG00000021630)	TMEM14A (ENSATEG00000021621)	ENSATEG00000021611	CILK1 (ENSATEG00000021599)	fbxo9 (ENSATEG00000021584)	elovl5 (ENSATEG00000021553)	gclc (ENSATEG00000021533)	klhl31 (ENSATEG00000021524)	ENSATEG00000021508	lrrc1 (ENSATEG00000021487) ##22	ENSATEG00000021471	FAM83B (ENSATEG00000021450)	hcrtr2 (ENSATEG00000021437)	ENSATEG00000028617	hmgcll1 (ENSATEG00000021420)	bmp5 (ENSATEG00000021412)	ENSATEG00000021385	ENSATEG00000021346	DST (ENSATEG00000021152)	ENSATEG00000020974	bag2 (ENSATEG00000020939)	rab23 (ENSATEG00000020913)	prim2 (ENSATEG00000020884)	KHDRBS2 (ENSATEG00000020863)	ENSATEG00000020763
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000166490.b	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000155080
Tetraodon	MODERN SPECIES	9	ENSTNIG00000016550	si:ch211-223p8.8 (ENSTNIG00000016551)	samd8 (ENSTNIG00000016552)	npy4r (ENSTNIG00000016553)	angpt2a (ENSTNIG00000016555)	mcph1 (ENSTNIG00000016554)	agpat5 (ENSTNIG00000016556)	tmem14a (ENSTNIG00000000827)	ENSTNIG00000016557	CILK1 (ENSTNIG00000016558)	fbxo9 (ENSTNIG00000016559)	elovl5 (ENSTNIG00000016560)	gclc (ENSTNIG00000016561)	klhl31 (ENSTNIG00000016562)	ENSTNIG00000016563	lrrc1 (ENSTNIG00000016564) ##22	ENSTNIG00000016565	ENSTNIG00000016566	hcrtr2 (ENSTNIG00000016567)	ENSTNIG00000000508	hmgcll1 (ENSTNIG00000016568)	bmp5 (ENSTNIG00000016569)	COL21A1 (ENSTNIG00000016570)	ENSTNIG00000016571	ENSTNIG00000016572	ENSTNIG00000016573	bag2 (ENSTNIG00000016574)	rab23 (ENSTNIG00000016575)	prim2 (ENSTNIG00000016576)	khdrbs2 (ENSTNIG00000016577)	ENSTNIG00000000396
Fugu	MODERN SPECIES	16	ENSTRUG00000014747	si:ch211-223p8.8 (ENSTRUG00000014750)	samd8 (ENSTRUG00000014755)	npy4r (ENSTRUG00000014788)	mcph1 (ENSTRUG00000014818)	angpt2a (ENSTRUG00000014844)	agpat5 (ENSTRUG00000014885)	tmem14a (ENSTRUG00000033487)	ENSTRUG00000020882	CILK1 (ENSTRUG00000014950)	fbxo9 (ENSTRUG00000015024)	elovl5 (ENSTRUG00000015079)	gclc (ENSTRUG00000015144)	klhl31 (ENSTRUG00000015226)	ENSTRUG00000015236	lrrc1 (ENSTRUG00000015250) ##22	ENSTRUG00000025043	FAM83B (ENSTRUG00000025049)	hcrtr2 (ENSTRUG00000015329)	ENSTRUG00000031437	hmgcll1 (ENSTRUG00000015377)	bmp5 (ENSTRUG00000015401)	COL21A1 (ENSTRUG00000025851)	ENSTRUG00000015654	bag2 (ENSTRUG00000015680)	rab23 (ENSTRUG00000015697)	prim2 (ENSTRUG00000015723)	khdrbs2 (ENSTRUG00000015760)	ENSTRUG00000027249	ENSTRUG00000015802	ENSTRUG00000026861
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Ballan wrasse	MODERN SPECIES	590				mcph1 (ENSLBEG00000001644)	angpt2a (ENSLBEG00000001666)	agpat5 (ENSLBEG00000001734)	ENSLBEG00000001799	tmem14a (ENSLBEG00000001812)	CILK1 (ENSLBEG00000001896)	fbxo9 (ENSLBEG00000001915)	elovl5 (ENSLBEG00000001946)	ENSLBEG00000001974	gclc (ENSLBEG00000001997)	klhl31 (ENSLBEG00000002054)	ENSLBEG00000002074	lrrc1 (ENSLBEG00000002099) ##22	ENSLBEG00000002177
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
European seabass	MODERN SPECIES	1	si:ch211-223p8.8 (ENSDLAG00005000318)	samd8 (ENSDLAG00005000315)	ENSDLAG00005000312	npy4r (ENSDLAG00005029763)	angpt2a (ENSDLAG00005000307)	ENSDLAG00005000299	agpat5 (ENSDLAG00005000291)	TMEM14A (ENSDLAG00005000286)	ENSDLAG00005000282	CILK1 (ENSDLAG00005000269)	fbxo9 (ENSDLAG00005000144)	elovl5 (ENSDLAG00005000080)	gclc (ENSDLAG00005023649)	klhl31 (ENSDLAG00005031785)	ENSDLAG00005023642	lrrc1 (ENSDLAG00005023595) ##22	ENSDLAG00005023586	ENSDLAG00005033749	FAM83B (ENSDLAG00005023571)	hcrtr2 (ENSDLAG00005023564)	GFRAL (ENSDLAG00005023559)	hmgcll1 (ENSDLAG00005023421)	bmp5 (ENSDLAG00005023396)	COL21A1 (ENSDLAG00005023390)	ENSDLAG00005023380	DST (ENSDLAG00005021489)	ENSDLAG00005021406	bag2 (ENSDLAG00005031410)	rab23 (ENSDLAG00005021397)	prim2 (ENSDLAG00005021380)	KHDRBS2 (ENSDLAG00005021369)
Large yellow croaker	MODERN SPECIES	2	si:ch211-223p8.8 (ENSLCRG00005015154)	samd8 (ENSLCRG00005015153)	ENSLCRG00005015152	ENSLCRG00005015151	angpt2a (ENSLCRG00005015118)	mcph1 (ENSLCRG00005015115)	agpat5 (ENSLCRG00005015113)	tmem14a (ENSLCRG00005015112)	ENSLCRG00005015110	CILK1 (ENSLCRG00005015108)	fbxo9 (ENSLCRG00005014971)	elovl5 (ENSLCRG00005014967)	gclc (ENSLCRG00005013959)	klhl31 (ENSLCRG00005013955)	ENSLCRG00005013952	lrrc1 (ENSLCRG00005013462) ##22	ENSLCRG00005013444	ENSLCRG00005013439	hcrtr2 (ENSLCRG00005013438)	ENSLCRG00005013436	hmgcll1 (ENSLCRG00005013173)	bmp5 (ENSLCRG00005013170)	ENSLCRG00005013168	ENSLCRG00005013166	DST (ENSLCRG00005010013)	ENSLCRG00005009970	bag2 (ENSLCRG00005009969)	rab23 (ENSLCRG00005009966)	prim2 (ENSLCRG00005009963)	khdrbs2 (ENSLCRG00005009958)	ENSLCRG00005009956
Gilthead seabream	MODERN SPECIES	6	samd8 (ENSSAUG00010025949)	ENSSAUG00010025951	npy4r (ENSSAUG00010025954)	mcph1 (ENSSAUG00010025958)	angpt2a (ENSSAUG00010025960)	agpat5 (ENSSAUG00010025962)	tmem14a (ENSSAUG00010025963)	GST3 (ENSSAUG00010025964)	ENSSAUG00010025967	CILK1 (ENSSAUG00010025969)	fbxo9 (ENSSAUG00010025973)	elovl5 (ENSSAUG00010025976)	gclc (ENSSAUG00010025986)	klhl31 (ENSSAUG00010025998)	ENSSAUG00010026000	lrrc1 (ENSSAUG00010026003) ##22	ENSSAUG00010026007	ENSSAUG00010026010	FAM83B (ENSSAUG00010026012)	hcrtr2 (ENSSAUG00010013201)	hmgcll1 (ENSSAUG00010013204)	bmp5 (ENSSAUG00010013229)	ENSSAUG00010013237	ENSSAUG00010013238	DST (ENSSAUG00010013274)	ENSSAUG00010017205	bag2 (ENSSAUG00010017208)	rab23 (ENSSAUG00010017209)	prim2 (ENSSAUG00010017213)	khdrbs2 (ENSSAUG00010017215)	ENSSAUG00010017216
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00940000174758	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000161766	ENSGT00940000158430	ENSGT00390000018842	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00940000174758	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Pike perch	MODERN SPECIES	10	samd8 (ENSSLUG00000019988)	ENSSLUG00000019980	ENSSLUG00000019975	ENSSLUG00000019972	angpt2a (ENSSLUG00000019966)	mcph1 (ENSSLUG00000019960)	agpat5 (ENSSLUG00000019955)	tmem14a (ENSSLUG00000019951)	ENSSLUG00000019945	CILK1 (ENSSLUG00000019940)	fbxo9 (ENSSLUG00000019886)	elovl5 (ENSSLUG00000019877)	gclc (ENSSLUG00000019836)	klhl31 (ENSSLUG00000019828)	ENSSLUG00000019822	lrrc1 (ENSSLUG00000019766) ##22	ENSSLUG00000019738	ENSSLUG00000019729	hcrtr2 (ENSSLUG00000019726)	ENSSLUG00000019722	hmgcll1 (ENSSLUG00000019687)	bmp5 (ENSSLUG00000019675)	ENSSLUG00000019664	ENSSLUG00000019647	DST (ENSSLUG00000014617)	ENSSLUG00000014250	bag2 (ENSSLUG00000014242)	rab23 (ENSSLUG00000014239)	prim2 (ENSSLUG00000014223)	khdrbs2 (ENSSLUG00000014216)	ENSSLUG00000014215
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000022202	samd8 (ENSCGOG00000022199)	ENSCGOG00000022198	npy4r (ENSCGOG00000022196)	angpt2a (ENSCGOG00000022145)	mcph1 (ENSCGOG00000022140)	agpat5 (ENSCGOG00000022122)	tmem14a (ENSCGOG00000022112)	ENSCGOG00000022114	CILK1 (ENSCGOG00000022110)	fbxo9 (ENSCGOG00000022042)	elovl5 (ENSCGOG00000021993)	gclc (ENSCGOG00000021274)	klhl31 (ENSCGOG00000021253)	ENSCGOG00000021251	lrrc1 (ENSCGOG00000021147) ##22	ENSCGOG00000021136	hcrtr2 (ENSCGOG00000021131)	hmgcll1 (ENSCGOG00000020977)	bmp5 (ENSCGOG00000020971)	ENSCGOG00000020969	DST (ENSCGOG00000019368)	ENSCGOG00000019323	bag2 (ENSCGOG00000019322)	rab23 (ENSCGOG00000019319)	prim2 (ENSCGOG00000019315)	khdrbs2 (ENSCGOG00000019292)	ENSCGOG00000019285	ENSCGOG00000019280	ENSCGOG00000019278	ADGRB3 (ENSCGOG00000018236)
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00940000166490.b	ENSGT00940000155540.b.a	ENSGT00940000175945	ENSGT00940000164226.b	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00940000174758	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000155080
Stickleback	MODERN SPECIES	6	adka (ENSGACG00000006579)	ENSGACG00000006568	ENSGACG00000006565	samd8 (ENSGACG00000006560)	angpt2a (ENSGACG00000006549)	mcph1 (ENSGACG00000006537)	agpat5 (ENSGACG00000006526)	tmem14a (ENSGACG00000006522)	ENSGACG00000006489	CILK1 (ENSGACG00000006468)	fbxo9 (ENSGACG00000006449)	elovl5 (ENSGACG00000006416)	gclc (ENSGACG00000006384)	klhl31 (ENSGACG00000006367)	ENSGACG00000006356	lrrc1 (ENSGACG00000006327) ##22	hcrtr2 (ENSGACG00000006310)	ENSGACG00000006299	hmgcll1 (ENSGACG00000006272)	bmp5 (ENSGACG00000006266)	COL21A1 (ENSGACG00000006250)	DST (ENSGACG00000006193)	ENSGACG00000006190	ENSGACG00000006186	bag2 (ENSGACG00000006169)	rab23 (ENSGACG00000006151)	prim2 (ENSGACG00000006105)	khdrbs2 (ENSGACG00000006097)	ENSGACG00000006071	ENSGACG00000006067	ENSGACG00000006065
Lumpfish	MODERN SPECIES	6	ENSCLMG00005019349	ENSCLMG00005019348	ENSCLMG00005019347	ENSCLMG00005019345	ENSCLMG00005019344	angpt2a (ENSCLMG00005019293)	agpat5 (ENSCLMG00005019291)	tmem14a (ENSCLMG00005019290)	ENSCLMG00005019289	ENSCLMG00005019287	CILK1 (ENSCLMG00005019285)	fbxo9 (ENSCLMG00005018587)	elovl5 (ENSCLMG00005018575)	gclc (ENSCLMG00005018553)	klhl31 (ENSCLMG00005018551)	lrrc1 (ENSCLMG00005018542) ##22	ENSCLMG00005018541	ENSCLMG00005018540	hcrtr2 (ENSCLMG00005018539)	hmgcll1 (ENSCLMG00005018538)	bmp5 (ENSCLMG00005018537)	COL21A1 (ENSCLMG00005018536)	ENSCLMG00005018535	khdrbs2 (ENSCLMG00005018534)	ENSCLMG00005018533	ENSCLMG00005018532	ENSCLMG00005018531	ENSCLMG00005018528	ENSCLMG00005018527	ADGRB3 (ENSCLMG00005018526)	lmbrd1 (ENSCLMG00005018476)
Pinecone sodierfish	MODERN SPECIES	6	si:ch211-223p8.8 (ENSMMDG00005009878)	samd8 (ENSMMDG00005009887)	ENSMMDG00005009890	ENSMMDG00005009899	mcph1 (ENSMMDG00005009988)	angpt2a (ENSMMDG00005010008)	agpat5 (ENSMMDG00005010291)	tmem14a (ENSMMDG00005010295)	ENSMMDG00005010297	CILK1 (ENSMMDG00005010300)	fbxo9 (ENSMMDG00005010309)	elovl5 (ENSMMDG00005010640)	gclc (ENSMMDG00005010645)	klhl31 (ENSMMDG00005010663)	ENSMMDG00005010668	lrrc1 (ENSMMDG00005010679) ##22	ENSMMDG00005010719	hcrtr2 (ENSMMDG00005010721)	ENSMMDG00005010742	hmgcll1 (ENSMMDG00005010744)	bmp5 (ENSMMDG00005010751)	COL21A1 (ENSMMDG00005010763)	ENSMMDG00005010767	DST (ENSMMDG00005010783)	ENSMMDG00005010796 #19	ENSMMDG00005010799	ENSMMDG00005010803	ENSMMDG00005010805	bag2 (ENSMMDG00005010807)	rab23 (ENSMMDG00005010809)	prim2 (ENSMMDG00005010814)
Cod	MODERN SPECIES	6	ENSGMOG00000005870	ENSGMOG00000005851	ENSGMOG00000034075	MCPH1 (ENSGMOG00000005787)	angpt2a (ENSGMOG00000005822)	AGPAT5 (ENSGMOG00000005775)	TMEM14A (ENSGMOG00000005767)	ENSGMOG00000005752	ENSGMOG00000037242	CILK1 (ENSGMOG00000005726)	fbxo9 (ENSGMOG00000005708)	elovl5 (ENSGMOG00000005699)	gclc (ENSGMOG00000005662)	klhl31 (ENSGMOG00000005654)	ENSGMOG00000005619	lrrc1 (ENSGMOG00000005589) ##22	ENSGMOG00000026906	ENSGMOG00000005524	hcrtr2 (ENSGMOG00000005503)	ENSGMOG00000030569	hmgcll1 (ENSGMOG00000005488)	bmp5 (ENSGMOG00000005466)	COL21A1 (ENSGMOG00000005416)	ENSGMOG00000034384	DST (ENSGMOG00000005141)	ENSGMOG00000024844	bag2 (ENSGMOG00000005117)	rab23 (ENSGMOG00000005102)	prim2 (ENSGMOG00000005085)	KHDRBS2 (ENSGMOG00000005065)	ENSGMOG00000005043
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00390000002428.b	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	451					ENSGT00940000155701.D.c	ENSGT00940000158430.c	ENSGT00390000018842.q	ENSGT00950000182836.b.a.a.n	ENSGT00940000158206.a	ENSGT00940000161750.cd	ENSGT00940000158807.j	ENSGT00390000014256.e	ENSGT01050000244838.C.b.o	ENSGT00390000011908.q.b	ENSGT00940000158352.g	ENSGT00940000154025.b.c ##22	ENSGT00940000159467.e	ENSGT00940000158644.d	ENSGT00940000153769.C	ENSGT00940000168119.e.b	ENSGT00940000155008.C.pc	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00510000046988.hb	ENSGT00940000159956.c	ENSGT00640000091563.a.q	ENSGT00940000157057.f.c	ENSGT00940000155701.D.c	ENSGT00940000158430.c	ENSGT00390000018842.q	ENSGT00950000182836.b.a.a.n	ENSGT00940000158206.a	ENSGT00940000161750.cd	ENSGT00940000158807.j	ENSGT00390000014256.e	ENSGT01050000244838.C.b.o	ENSGT00390000011908.q.b	ENSGT00940000158352.g	ENSGT00940000154025.b.c ##22	ENSGT00940000157889.g.a.c	ENSGT00940000159467.e	ENSGT00940000158644.d	ENSGT00940000153769.C	ENSGT00940000168119.e.b	ENSGT00940000155008.C.pc	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.b
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00510000046988.hb	ENSGT00940000159956.c	ENSGT00640000091563.a.q	ENSGT00940000157057.f.c	ENSGT00940000155701.D.c	ENSGT00390000018842.q	ENSGT00940000158430.c	ENSGT00950000182836.b.a.a.n	ENSGT00940000158206.a	ENSGT00940000161750.cd	ENSGT00940000158807.j	ENSGT00390000014256.e	ENSGT01050000244838.C.b.o.a	ENSGT00390000011908.q.b	ENSGT00940000158352.g	ENSGT00940000154025.b.c ##22	ENSGT00940000157889.g.a.c	ENSGT00940000159467.e	ENSGT00940000158644.d	ENSGT00940000162318.b	ENSGT00940000153769.C	ENSGT00940000168119.e.b	ENSGT00940000155008.C.pc	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00510000046988.hb	ENSGT00940000159956.c	ENSGT00640000091563.a.q	ENSGT00940000157057.f.c	ENSGT00940000155701.D.c	ENSGT00390000018842.q	ENSGT00940000158430.c	ENSGT00950000182836.b.a.a.n	ENSGT00940000158206.a	ENSGT00940000161750.cd	ENSGT00940000158807.j	ENSGT00390000014256.e	ENSGT01050000244838.C.b.o.a	ENSGT00390000011908.q.b	ENSGT00940000158352.g	ENSGT00940000154025.b.c ##22	ENSGT00940000157889.g.a.c	ENSGT00940000159467.e	ENSGT00940000158644.d	ENSGT00940000162318.b	ENSGT00940000153769.C	ENSGT00940000168119.e.b	ENSGT00940000155008.C.pc	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b
Coho salmon	MODERN SPECIES	2	MPC1 (ENSOKIG00005032589)	ENSOKIG00005032852	rnaset2 (ENSOKIG00005036031)	MYOM2 (ENSOKIG00005036074)	CSMD1 (ENSOKIG00005036823)	mcph1 (ENSOKIG00005038814)	angpt2a (ENSOKIG00005038837)	AGPAT5 (ENSOKIG00005038871)	tmem14a (ENSOKIG00005038941)	ENSOKIG00005038954	CILK1 (ENSOKIG00005038995)	fbxo9 (ENSOKIG00005039096)	elovl5 (ENSOKIG00005040149)	gclc (ENSOKIG00005040251)	klhl31 (ENSOKIG00005040441)	lrrc1 (ENSOKIG00005040478) ##22	ENSOKIG00005040565	FAM83B (ENSOKIG00005040573)	hmgcll1 (ENSOKIG00005040603)	bmp5 (ENSOKIG00005040836)	COL21A1 (ENSOKIG00005040963)	ENSOKIG00005041061	DST (ENSOKIG00005041527)	ENSOKIG00005046036	ENSOKIG00005046062	bag2 (ENSOKIG00005046067)	rab23 (ENSOKIG00005046082)	prim2 (ENSOKIG00005046100)	khdrbs2 (ENSOKIG00005046157)	ENSOKIG00005046187	XPO5 (ENSOKIG00005046247)
Chinook salmon	MODERN SPECIES		ENSOTSG00005013353	rnaset2 (ENSOTSG00005013258)	MYOM2 (ENSOTSG00005013205)	ENSOTSG00005013197	CSMD1 (ENSOTSG00005012751)	angpt2a (ENSOTSG00005012729)	mcph1 (ENSOTSG00005012728)	agpat5 (ENSOTSG00005012727)	tmem14a (ENSOTSG00005012726)	ENSOTSG00005012723	CILK1 (ENSOTSG00005012721)	fbxo9 (ENSOTSG00005012631)	elovl5 (ENSOTSG00005012627)	gclc (ENSOTSG00005012278)	klhl31 (ENSOTSG00005012265)	lrrc1 (ENSOTSG00005012199) ##22	FAM83B (ENSOTSG00005012198)	hmgcll1 (ENSOTSG00005011718)	bmp5 (ENSOTSG00005011702)	ENSOTSG00005011701	ENSOTSG00005011699	DST (ENSOTSG00005007761)	ENSOTSG00005007677	bag2 (ENSOTSG00005007675)	rab23 (ENSOTSG00005007673)	prim2 (ENSOTSG00005007670)	khdrbs2 (ENSOTSG00005007669)	ENSOTSG00005007655	XPO5 (ENSOTSG00005005617)	ARHGAP19 (ENSOTSG00005005585)	ENSOTSG00005005584
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000070452	ENSOMYG00000061170	CSMD1 (ENSOMYG00000038083)	angpt2a (ENSOMYG00000037462)	mcph1 (ENSOMYG00000037442)	ENSOMYG00000061469	agpat5 (ENSOMYG00000037423)	TMEM14A (ENSOMYG00000037406)	ENSOMYG00000037388	CILK1 (ENSOMYG00000037380)	fbxo9 (ENSOMYG00000036533)	elovl5 (ENSOMYG00000036404)	ENSOMYG00000068939	gclc (ENSOMYG00000036073)	klhl31 (ENSOMYG00000035961)	lrrc1 (ENSOMYG00000035870) ##22	FAM83B (ENSOMYG00000043069)	ENSOMYG00000046006	hmgcll1 (ENSOMYG00000042336)	bmp5 (ENSOMYG00000042248)	ENSOMYG00000026418	ENSOMYG00000042236	ENSOMYG00000042227	ENSOMYG00000069754	DST (ENSOMYG00000037056)	ENSOMYG00000036123	ENSOMYG00000054877	bag2 (ENSOMYG00000071427)	rab23 (ENSOMYG00000036101)	ENSOMYG00000051765	prim2 (ENSOMYG00000036018)
Salmo	ANCESTRAL SPECIES	23	ENSGT00510000046988.hb	ENSGT00940000159956.c	ENSGT00640000091563.a.q	ENSGT00940000157057.f.c	ENSGT00940000155701.D.c	ENSGT00940000158430.c	ENSGT00390000018842.q	ENSGT00950000182836.b.a.a.n	ENSGT00940000158206.a	ENSGT00940000161750.cd	ENSGT00940000158807.j	ENSGT00390000014256.e	ENSGT01050000244838.C.b.o	ENSGT00390000011908.q.a.a	ENSGT00940000158352.g	ENSGT00940000154025.b.c ##22	ENSGT00940000157889.g.a.c	ENSGT00940000159467.e	ENSGT00940000158644.d	ENSGT00940000153769.C	ENSGT00940000168119.e.b	ENSGT00940000155008.C.pc	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.a.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.b
Atlantic salmon	MODERN SPECIES		ENSSSAG00000009841	rnaset2 (ENSSSAG00000009309)	MYOM2 (ENSSSAG00000008716)	CSMD1 (ENSSSAG00000122294)	angpt2a (ENSSSAG00000007593)	mcph1 (ENSSSAG00000007559)	ENSSSAG00000089453	agpat5 (ENSSSAG00000008927)	ENSSSAG00000007533	TMEM14A (ENSSSAG00000099089)	CILK1 (ENSSSAG00000007519)	fbxo9 (ENSSSAG00000007181)	elvol5a (ENSSSAG00000007146)	gclc (ENSSSAG00000007099)	klhl31 (ENSSSAG00000121172)	lrrc1 (ENSSSAG00000006771) ##22	FAM83B (ENSSSAG00000082232)	ENSSSAG00000006746	hmgcll1 (ENSSSAG00000006514)	bmp5 (ENSSSAG00000006451)	ENSSSAG00000110324	COL21A1 (ENSSSAG00000006401)	ENSSSAG00000006361	ENSSSAG00000042902	DST (ENSSSAG00000002545)	ENSSSAG00000001900	bag2 (ENSSSAG00000001893)	rab23 (ENSSSAG00000092471)	prim2 (ENSSSAG00000001875)	KHDRBS2 (ENSSSAG00000001861)	ENSSSAG00000001853
River trout	MODERN SPECIES	9	ENSSTUG00000050644	rnaset2 (ENSSTUG00000050612)	MYOM2 (ENSSTUG00000050515)	CSMD1 (ENSSTUG00000050130)	angpt2a (ENSSTUG00000050048)	mcph1 (ENSSTUG00000050044)	agpat5 (ENSSTUG00000050035)	tmem14a (ENSSTUG00000050031)	ENSSTUG00000050028	CILK1 (ENSSTUG00000050027)	fbxo9 (ENSSTUG00000049970)	elovl5 (ENSSTUG00000049962)	gclc (ENSSTUG00000049933)	ENSSTUG00000049931	klhl31 (ENSSTUG00000049930)	lrrc1 (ENSSTUG00000049916) ##22	ENSSTUG00000049912	ENSSTUG00000049910	hmgcll1 (ENSSTUG00000049877)	bmp5 (ENSSTUG00000049868)	ENSSTUG00000049863	ENSSTUG00000049858	DST (ENSSTUG00000046156)	ENSSTUG00000045759	bag2 (ENSSTUG00000045751)	ENSSTUG00000045744	rab23 (ENSSTUG00000045730)	prim2 (ENSSTUG00000045651)	khdrbs2 (ENSSTUG00000045622)	ENSSTUG00000045608	XPO5 (ENSSTUG00000045278)
Huchen	MODERN SPECIES	203					CSMD1 (ENSHHUG00000036595)	angpt2a (ENSHHUG00000036583)	mcph1 (ENSHHUG00000036553)	agpat5 (ENSHHUG00000036524)	tmem14a (ENSHHUG00000036518)	ENSHHUG00000036499	CILK1 (ENSHHUG00000036485)	fbxo9 (ENSHHUG00000036405)	elovl5 (ENSHHUG00000036286)	gclc (ENSHHUG00000036189)	klhl31 (ENSHHUG00000036175)	lrrc1 (ENSHHUG00000036164) ##22
Salmoninae	ANCESTRAL SPECIES	233	ENSGT00940000159956.d	ENSGT00640000091563.a.r	ENSGT00940000157057.f.d	ENSGT00940000155701.D.d	ENSGT00390000018842.r	ENSGT00940000158430.d	ENSGT00950000182836.b.a.a.m	ENSGT00940000158206.b	ENSGT00940000161750.dd	ENSGT00940000158807.i	ENSGT00390000014256.f	ENSGT01050000244838.C.b.p	ENSGT00390000011908.r	ENSGT00940000158352.h	ENSGT00390000002428.b	ENSGT00940000154025.b.d ##22	ENSGT00940000174758	ENSGT00940000157889.g.a.c	ENSGT00390000015862	ENSGT00940000157889.g.a.d	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467.f	ENSGT00940000158644.c	ENSGT00940000162318.a	ENSGT00940000168119.e.a	ENSGT00940000155008.C.qc	ENSGT00940000166866.d	ENSGT00390000017590.d	ENSGT00940000155064.n	ENSGT00390000009790.d
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000159956.d	ENSGT00640000091563.a.r	ENSGT00940000157057.f.d	ENSGT00940000155701.D.d	ENSGT00390000018842.r	ENSGT00940000158430.d	ENSGT00950000182836.b.a.a.m	ENSGT00940000158206.b	ENSGT00940000161750.dd	ENSGT00940000158807.i	ENSGT00390000014256.f	ENSGT01050000244838.C.b.p	ENSGT00390000011908.r	ENSGT00940000158352.h	ENSGT00390000002428.b	ENSGT00940000154025.b.d ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.d	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467.f	ENSGT00940000158644.c	ENSGT00940000162318.a	ENSGT00940000168119.e.a	ENSGT00940000155008.C.qc	ENSGT00940000166866.d	ENSGT00390000017590.d	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000159956.d	ENSGT00640000091563.a.r	ENSGT00940000157057.f.d	ENSGT00940000155701.D.d	ENSGT00390000018842.r	ENSGT00940000158430.d	ENSGT00950000182836.b.a.a.m	ENSGT00940000158206.b	ENSGT00940000161750.dd	ENSGT00940000158807.i	ENSGT00390000014256.f	ENSGT01050000244838.C.b.p	ENSGT00390000011908.r	ENSGT00940000158352.h	ENSGT00390000002428.b	ENSGT00940000154025.b.d ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.d	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467.f	ENSGT00940000158644.c	ENSGT00940000162318.a	ENSGT00940000168119.e.a	ENSGT00940000155008.C.qc	ENSGT00940000166866.d	ENSGT00390000017590.d	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b
River trout	MODERN SPECIES	1	rnaset2 (ENSSTUG00000044769)	MYOM2 (ENSSTUG00000044277)	ENSSTUG00000044249	CSMD1 (ENSSTUG00000041019)	ENSSTUG00000040810	angpt2a (ENSSTUG00000040678)	agpat5 (ENSSTUG00000040620)	ENSSTUG00000040596	ENSSTUG00000040569	CILK1 (ENSSTUG00000040500)	fbxo9 (ENSSTUG00000039466)	elovl5 (ENSSTUG00000039422)	gclc (ENSSTUG00000039141)	klhl31 (ENSSTUG00000039124)	ENSSTUG00000039109	lrrc1 (ENSSTUG00000039080) ##22	ENSSTUG00000039072	FAM83B (ENSSTUG00000039062)	hcrtr2 (ENSSTUG00000039055)	ENSSTUG00000039050	hmgcll1 (ENSSTUG00000038970)	bmp5 (ENSSTUG00000038918)	COL21A1 (ENSSTUG00000038802)	ENSSTUG00000038778	ENSSTUG00000038772	DST (ENSSTUG00000034217)	ENSSTUG00000034022	bag2 (ENSSTUG00000034015)	rab23 (ENSSTUG00000033997)	khdrbs2 (ENSSTUG00000033974)	ENSSTUG00000033953
Atlantic salmon	MODERN SPECIES	20	rnaset2 (ENSSSAG00000011705)	MYOM2 (ENSSSAG00000010629)	ENSSSAG00000083216	CSMD1 (ENSSSAG00000085166)	angpt2a (ENSSSAG00000009056)	mcph1 (ENSSSAG00000009244)	agpat5 (ENSSSAG00000118158)	TMEM14A (ENSSSAG00000099838)	CILK1 (ENSSSAG00000008752)	FBX9 (ENSSSAG00000079444)	elovl5 (ENSSSAG00000079420)	gclc (ENSSSAG00000079369)	ENSSSAG00000117117	klhl31 (ENSSSAG00000083606)	ENSSSAG00000079341	lrrc1 (ENSSSAG00000079322) ##22	ENSSSAG00000079305	FAM83B (ENSSSAG00000079303)	hcrtr2 (ENSSSAG00000079299)	ENSSSAG00000079295	HMGCL (ENSSSAG00000079068)	bmp5 (ENSSSAG00000095517)	COL21A1 (ENSSSAG00000079013)	ENSSSAG00000079008	DST (ENSSSAG00000077926)	ENSSSAG00000077783	bag2 (ENSSSAG00000077777)	ENSSSAG00000109425	rab23 (ENSSSAG00000083099)	PRIM2 (ENSSSAG00000077752)	KHDRBS2 (ENSSSAG00000077738)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000159956.d	ENSGT00640000091563.a.r	ENSGT00940000157057.f.d	ENSGT00940000155701.D.d	ENSGT00390000018842.r	ENSGT00940000158430.d	ENSGT00950000182836.b.a.a.m	ENSGT00940000158206.b	ENSGT00940000161750.dd	ENSGT00940000158807.i	ENSGT00390000014256.f	ENSGT01050000244838.C.b.p	ENSGT00390000011908.r	ENSGT00940000158352.h	ENSGT00390000002428.b	ENSGT00940000154025.b.d ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.d	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467.f	ENSGT00940000158644.c	ENSGT00940000162318.a	ENSGT00940000168119.e.a	ENSGT00940000155008.C.qc	ENSGT00940000166866.d	ENSGT00390000017590.d	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000055113	CSMD1 (ENSOMYG00000030961)	ENSOMYG00000029583	angpt2a (ENSOMYG00000029524)	AGPAT5 (ENSOMYG00000029491)	TMEM14A (ENSOMYG00000029477)	ENSOMYG00000029471	CILK1 (ENSOMYG00000029459)	fbxo9 (ENSOMYG00000028899)	elovl5 (ENSOMYG00000028693)	gclc (ENSOMYG00000028624)	ENSOMYG00000071532	ENSOMYG00000051874	klhl31 (ENSOMYG00000028412)	ENSOMYG00000028398	lrrc1 (ENSOMYG00000028353) ##22	ENSOMYG00000048393	ENSOMYG00000045774	FAM83B (ENSOMYG00000045765)	hcrtr2 (ENSOMYG00000045760)	hmgcll1 (ENSOMYG00000045644)	ENSOMYG00000055849	ENSOMYG00000068023	bmp5 (ENSOMYG00000045602)	COL21A1 (ENSOMYG00000045589)	DST (ENSOMYG00000044018)	ENSOMYG00000043464	bag2 (ENSOMYG00000036104)	ENSOMYG00000043449	rab23 (ENSOMYG00000043444)	ENSOMYG00000043433
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000159956.d	ENSGT00640000091563.a.r	ENSGT00940000157057.f.d	ENSGT00940000155701.D.d	ENSGT00390000018842.r	ENSGT00940000158430.d	ENSGT00950000182836.b.a.a.m	ENSGT00940000158206.b	ENSGT00940000161750.dd	ENSGT00940000158807.i	ENSGT00390000014256.f	ENSGT01050000244838.C.b.p	ENSGT00390000011908.r	ENSGT00940000158352.h	ENSGT00390000002428.b	ENSGT00940000154025.b.d ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.d	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467.f	ENSGT00940000158644.c	ENSGT00940000162318.a	ENSGT00940000168119.e.a	ENSGT00940000155008.C.qc	ENSGT00940000166866.d	ENSGT00390000017590.d	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b
Chinook salmon	MODERN SPECIES	17	ENSOTSG00005016156	rnaset2 (ENSOTSG00005016135)	MYOM2 (ENSOTSG00005016133)	CSMD1 (ENSOTSG00005016022)	ENSOTSG00005016005	angpt2a (ENSOTSG00005015977)	agpat5 (ENSOTSG00005015976)	TMEM14A (ENSOTSG00005015975)	ENSOTSG00005015973	CILK1 (ENSOTSG00005015971)	fbxo9 (ENSOTSG00005014886)	elovl5 (ENSOTSG00005014876)	gclc (ENSOTSG00005011852)	klhl31 (ENSOTSG00005011845)	ENSOTSG00005011841	lrrc1 (ENSOTSG00005011835) ##22	ENSOTSG00005011830	ENSOTSG00005011829	hcrtr2 (ENSOTSG00005011825)	ENSOTSG00005011823	hmgcll1 (ENSOTSG00005011813)	ENSOTSG00005011822	bmp5 (ENSOTSG00005011808)	COL21A1 (ENSOTSG00005011805)	ENSOTSG00005011804	DST (ENSOTSG00005002828)	ENSOTSG00005002625	bag2 (ENSOTSG00005002622)	rab23 (ENSOTSG00005002619)	cpn1 (ENSOTSG00005034612)	ENSOTSG00005034611
Coho salmon	MODERN SPECIES	17	MYOM2 (ENSOKIG00005050783)	ENSOKIG00005050776	CSMD1 (ENSOKIG00005050613)	ENSOKIG00005050505	ENSOKIG00005050500	angpt2a (ENSOKIG00005050495)	agpat5 (ENSOKIG00005050491)	TMEM14A (ENSOKIG00005050489)	ENSOKIG00005050488	CILK1 (ENSOKIG00005050486)	fbxo9 (ENSOKIG00005050472)	elovl5 (ENSOKIG00005050454)	gclc (ENSOKIG00005050404)	klhl31 (ENSOKIG00005050370)	ENSOKIG00005050363	lrrc1 (ENSOKIG00005050355) ##22	ENSOKIG00005050349	FAM83B (ENSOKIG00005050345)	hcrtr2 (ENSOKIG00005050340)	ENSOKIG00005050334	hmgcll1 (ENSOKIG00005050322)	bmp5 (ENSOKIG00005050313)	COL21A1 (ENSOKIG00005050297)	ENSOKIG00005050283	DST (ENSOKIG00005026180)	ENSOKIG00005024202	ENSOKIG00005024180	rab23 (ENSOKIG00005024161)	PRIM2 (ENSOKIG00005024043)	KHDRBS2 (ENSOKIG00005024014)	ENSOKIG00005023920
Huchen	MODERN SPECIES	286	ENSHHUG00000045205	ENSHHUG00000045207	ENSHHUG00000045210	csmd1a (ENSHHUG00000045214)	vps26a (ENSHHUG00000045215)	ENSHHUG00000045217	angpt2a (ENSHHUG00000045230)	agpat5 (ENSHHUG00000045250)	ENSHHUG00000045265	CILK1 (ENSHHUG00000045277)	fbxo9 (ENSHHUG00000045291)	elovl5 (ENSHHUG00000045333)	gclc (ENSHHUG00000045378)	klhl31 (ENSHHUG00000045432)	ENSHHUG00000045452	lrrc1 (ENSHHUG00000045458) ##22
Northern pike	MODERN SPECIES	5	MYOM2 (ENSELUG00000019380)	CSMD1 (ENSELUG00000019489)	mcph1 (ENSELUG00000019645)	angpt2a (ENSELUG00000019551)	agpat5 (ENSELUG00000019699)	tmem14a (ENSELUG00000019713)	sult6b1 (ENSELUG00000019731)	gsta3 (ENSELUG00000034680)	CILK1 (ENSELUG00000019783)	fbxo9 (ENSELUG00000019800)	elovl5 (ENSELUG00000019836)	gclc (ENSELUG00000019935)	klhl31 (ENSELUG00000019960)	ela2l (ENSELUG00000026958)	ENSELUG00000019999	lrrc1 (ENSELUG00000020095) ##22	ENSELUG00000020119	FAM83B (ENSELUG00000020142)	hcrtr2 (ENSELUG00000020170)	ENSELUG00000020182	hmgcll1 (ENSELUG00000020228)	bmp5 (ENSELUG00000020247)	COL21A1 (ENSELUG00000020303)	ENSELUG00000020422	DST (ENSELUG00000020586)	ENSELUG00000028331	ENSELUG00000031724	ENSELUG00000020757	bag2 (ENSELUG00000031955)	rab23 (ENSELUG00000020788)	prim2 (ENSELUG00000020852)
Otomorpha	ANCESTRAL SPECIES	67	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000155008.A	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Clupeiformes	ANCESTRAL SPECIES	95	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000158034	ENSGT00940000154418.a.a.a	ENSGT00940000154615.i.a.b.i.b	ENSGT00940000163289.b.a.b	ENSGT00390000015849	ENSGT00940000155588.b
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	176											CILK1 (ENSDCDG00000013237)	fbxo9 (ENSDCDG00000013250)	elovl5 (ENSDCDG00000013714)	gclc (ENSDCDG00000014507)	klhl31 (ENSDCDG00000014890)	lrrc1 (ENSDCDG00000014897) ##22
Denticle herring	MODERN SPECIES	18	irf1a (ENSDCDG00000027456)	mpc1 (ENSDCDG00000027452)	RPS6KA2 (ENSDCDG00000016429)	rnaset2 (ENSDCDG00000016228)	MYOM2 (ENSDCDG00000014845)	CSMD1 (ENSDCDG00000012892)	angpt2a (ENSDCDG00000012740)	mcph1 (ENSDCDG00000012737)	agpat5 (ENSDCDG00000012734)	tmem14a (ENSDCDG00000012729)	CILK1 (ENSDCDG00000012712)	fbxo9 (ENSDCDG00000011831)	elovl5 (ENSDCDG00000011799)	gclc (ENSDCDG00000011735)	ENSDCDG00000011723	lrrc1 (ENSDCDG00000011713) ##22	ENSDCDG00000011701	FAM83B (ENSDCDG00000011690)	hcrtr2 (ENSDCDG00000011683)	hmgcll1 (ENSDCDG00000009583)	bmp5 (ENSDCDG00000009487)	ENSDCDG00000009466	ENSDCDG00000009450	pcgf6 (ENSDCDG00000007916)	inaa (ENSDCDG00000007517)	MFAP4 (ENSDCDG00000007459)	nt5c2a (ENSDCDG00000005828)	cnnm2a (ENSDCDG00000005649)	borcs7 (ENSDCDG00000005644)	cyp17a1 (ENSDCDG00000004968)	wbp1la (ENSDCDG00000004933)
Atlantic herring	MODERN SPECIES	4	RPS6KA2 (ENSCHAG00000003421)	rnaset2 (ENSCHAG00000013034)	MYOM2 (ENSCHAG00000013062)	ENSCHAG00000013787	CSMD1 (ENSCHAG00000013841)	mcph1 (ENSCHAG00000016202)	angpt2a (ENSCHAG00000016210)	agpat5 (ENSCHAG00000016289)	tmem14a (ENSCHAG00000016392)	ENSCHAG00000016409	ENSCHAG00000016432	fbxo9 (ENSCHAG00000016462)	elovl5 (ENSCHAG00000016788)	gclc (ENSCHAG00000016809)	klhl31 (ENSCHAG00000016928)	lrrc1 (ENSCHAG00000016983) ##22	ENSCHAG00000017155	FAM83B (ENSCHAG00000017163)	hcrtr2 (ENSCHAG00000017187)	ENSCHAG00000017196	HMGCL (ENSCHAG00000017227)	bmp5 (ENSCHAG00000017736)	COL21A1 (ENSCHAG00000017810)	ENSCHAG00000017852	DST (ENSCHAG00000018616)	pcgf6 (ENSCHAG00000027714)	inaa (ENSCHAG00000027715)	nt5c2a (ENSCHAG00000027716)	MFAP4 (ENSCHAG00000027720)	cnnm2a (ENSCHAG00000027722)	borcs7 (ENSCHAG00000027723)
Otophysi	ANCESTRAL SPECIES		ENSGT00940000155683	ENSGT00950000182898.a.a.a.a.b.h	ENSGT00940000164505.b	ENSGT00390000010094.b	ENSGT00940000157084.e.b	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00390000017590	ENSGT00940000155064	ENSGT00990000204028.e	ENSGT00940000160850	ENSGT00940000158448	ENSGT00530000063484.a	ENSGT00550000075035	ENSGT00950000183091.A.b
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000153408.A	ENSGT00390000004068	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318.c	ENSGT00390000017590	ENSGT00940000155064	ENSGT00940000165457.a.a.a.a.b	ENSGT01030000235197	ENSGT00940000160850	ENSGT00940000158448	ENSGT00530000063484.a	ENSGT00550000075035
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	120	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a.l	ENSGT00940000153408.A.q	ENSGT00390000004068.b	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150.d	ENSGT00390000014256.j	ENSGT01050000244838.C.b	ENSGT00390000011908.u	ENSGT00390000011908.v	ENSGT00940000158352.d	ENSGT00390000002428.b.b	ENSGT00940000154025.b.g ##22	ENSGT00940000157889.g.a.b	ENSGT01070000253744.a.a.b.b.n	ENSGT00730000111274.c	ENSGT00940000159467.a.b	ENSGT00940000158644.a	ENSGT00940000153769.C.b	ENSGT00940000168119.d	ENSGT00940000155008.C.kc	ENSGT00940000166866.a	ENSGT00390000017590.b	ENSGT00940000155064.l	ENSGT00940000165457.a.a.a.a.b.a.a	ENSGT01030000235197.b	ENSGT00940000160850	ENSGT00940000158448.n
Cyprininae_a	ANCESTRAL SPECIES	251	ENSGT00390000008798.d.b.h	ENSGT00940000156543.a	ENSGT00940000157912.c	ENSGT00390000002164.a	ENSGT00390000018525.a.a.m	ENSGT00940000159956.b.a	ENSGT00640000091563.a.p	ENSGT00940000157057.f.a	ENSGT00940000155701.D.n.a	ENSGT00530000064150.c	ENSGT00390000014256.i	ENSGT01050000244838.C.b	ENSGT00390000011908.v	ENSGT00940000158352.d	ENSGT00390000002428.b.b	ENSGT00940000154025.b.g ##22	ENSGT00940000157889.g.a.b	ENSGT01070000253744.a.a.b.b.n	ENSGT00730000111274.c	ENSGT00940000159467.b	ENSGT00940000159467.a.b	ENSGT00940000158644.a	ENSGT00940000162318.c	ENSGT00940000168119.d	ENSGT00940000155008.C.kc	ENSGT00940000166866.a	ENSGT00390000017590.b	ENSGT00940000155064.l	ENSGT00940000165457.a.a.a.a.b.a.a	ENSGT00940000165457.a.a.a.a.b.a.b	ENSGT01030000235197.a
Golden-line barbel	MODERN SPECIES	234										ARFGEF3 (ENSSGRG00000015844)	fbxo9 (ENSSGRG00000016716)	elovl5 (ENSSGRG00000016725)	gclc (ENSSGRG00000016734)	klhl31 (ENSSGRG00000016829)	ENSSGRG00000016830	lrrc1 (ENSSGRG00000016831) ##22	FAM83B (ENSSGRG00000016836)	hcrtr2 (ENSSGRG00000016837)	hmgcll1 (ENSSGRG00000016838)	bmp5 (ENSSGRG00000016839)	ENSSGRG00000016844	ENSSGRG00000016846	DST (ENSSGRG00000016910)	ENSSGRG00000019592	ENSSGRG00000019593	rab23 (ENSSGRG00000019594)	ifngr1l (ENSSGRG00000019595)	si:ch73-52p7.1 (ENSSGRG00000019596)	TNFAIP3 (ENSSGRG00000019597)	perp (ENSSGRG00000019599)	psmb1 (ENSSGRG00000019602)
Common carp reference	MODERN SPECIES	18	ENSCCRG00000026964	ENSCCRG00000062453	ENSCCRG00000000834	ENSCCRG00000078363	ENSCCRG00000061606	ENSCCRG00000080704	ENSCCRG00000057988	ENSCCRG00000061390	ENSCCRG00000062015	ENSCCRG00000077011	ENSCCRG00000056096	fbxo9 (ENSCCRG00000020573)	elovl5 (ENSCCRG00000071270)	gclc (ENSCCRG00000054722)	klhl31 (ENSCCRG00000020075)	lrrc1 (ENSCCRG00000012821) ##22	ENSCCRG00000024844	ENSCCRG00000079801	hcrtr2 (ENSCCRG00000069172)	ENSCCRG00000024418	ENSCCRG00000082835	hmgcll1 (ENSCCRG00000056542)	bmp5 (ENSCCRG00000019842)	COL21A1 (ENSCCRG00000043242)	ENSCCRG00000043248	DST (ENSCCRG00000040497)	bag2 (ENSCCRG00000040263)	rab23 (ENSCCRG00000018186)	ifngr1l (ENSCCRG00000063870)	ifngr1l (ENSCCRG00000040229)	si:ch73-52p7.1 (ENSCCRG00000040226)
Goldfish	MODERN SPECIES	4	micu1 (ENSCARG00000002821)	nolc1 (ENSCARG00000002790)	ENSCARG00000002788	mrps6 (ENSCARG00000002784)	psap (ENSCARG00000002152)	ENSCARG00000067590	SLC29A3 (ENSCARG00000067572)	c1d (ENSCARG00000067562)	wdr11 (ENSCARG00000067510)	PLPP4 (ENSCARG00000067456)	ENSCARG00000067443	ENSCARG00000067436	ENSCARG00000067432	fbxo9 (ENSCARG00000067169)	gclc (ENSCARG00000066926)	lrrc1 (ENSCARG00000066775) ##22	ENSCARG00000066745	ENSCARG00000066741	ENSCARG00000066737	ENSCARG00000066734	FAM83B (ENSCARG00000066727)	sft2d1 (ENSCARG00000066718)	RPS6KA2 (ENSCARG00000066514)	rnaset2 (ENSCARG00000066473)	ENSCARG00000066458	MYOM2 (ENSCARG00000065782)	RNF213 (ENSCARG00000065539)	prorsd1 (ENSCARG00000065502)	ENSCARG00000065495	CCDC88A (ENSCARG00000063962)	ENSCARG00000063886
Cyprininae	ANCESTRAL SPECIES	395														ENSGT00940000158352.c	ENSGT00390000002428.b.a	ENSGT00940000154025.b.h ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.a	ENSGT01070000253744.a.a.b.b.m	ENSGT00730000111274.d	ENSGT00940000159467.a.a	ENSGT00940000158644.b	ENSGT00940000162318.c	ENSGT00940000168119.c	ENSGT00940000155008.C.jc	ENSGT00940000166866.b	ENSGT00390000017590.a	ENSGT00940000155064.k	ENSGT00940000165457.a.a.a.a.b.a.b	ENSGT01030000235197.a	ENSGT00940000158448.m
Cyprininae_a	ANCESTRAL SPECIES	376						ENSGT00940000153408.A.q	ENSGT00390000004068.b	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150.d	ENSGT00390000014256.j	ENSGT00390000011908.u	ENSGT00940000158352.c	ENSGT00390000002428.b.a	ENSGT00940000154025.b.h ##22	ENSGT00390000015862	ENSGT00940000157889.g.a.a	ENSGT01070000253744.a.a.b.b.m	ENSGT00730000111274.d	ENSGT00940000159467.a.a	ENSGT00940000158644.b	ENSGT00940000153769.C.a	ENSGT00940000168119.c	ENSGT00940000155008.C.jc	ENSGT00940000166866.b	ENSGT00390000017590.a	ENSGT00940000155064.k	ENSGT00940000160850	ENSGT00940000158448.n	ENSGT00530000063484.a.s.a
Common carp reference	MODERN SPECIES	48	angpt2a (ENSCCRG00000032371)	mcph1 (ENSCCRG00000065763)	ENSCCRG00000076828	agpat5 (ENSCCRG00000038564)	ENSCCRG00000042625	ENSCCRG00000060254	wdr11 (ENSCCRG00000074884)	ENSCCRG00000058962	ENSCCRG00000057088	ENSCCRG00000062990	lhb (ENSCCRG00000050461)	ENSCCRG00000050361	fbxo9 (ENSCCRG00000050256)	klhl31 (ENSCCRG00000065353)	ENSCCRG00000056388	lrrc1 (ENSCCRG00000020071) ##22	ENSCCRG00000051466	FAM83B (ENSCCRG00000051468)	ENSCCRG00000053990	ENSCCRG00000071690	hcrtr2 (ENSCCRG00000014346)	ENSCCRG00000068475	hmgcll1 (ENSCCRG00000023107)	bmp5 (ENSCCRG00000068755)	COL21A1 (ENSCCRG00000032000)	ENSCCRG00000032005	ENSCCRG00000063630	DST (ENSCCRG00000061418)	ENSCCRG00000018192	bag2 (ENSCCRG00000072709)	rab23 (ENSCCRG00000061169)
Golden-line barbel	MODERN SPECIES	1470											fbxo9 (ENSSGRG00000001616)	elovl5 (ENSSGRG00000046047)	gclc (ENSSGRG00000046034)	klhl31 (ENSSGRG00000046033)	ENSSGRG00000046032	lrrc1 (ENSSGRG00000045908) ##22	ENSSGRG00000045906	ENSSGRG00000045905
Goldfish	MODERN SPECIES	31	mpc1 (ENSCARG00000028238)	ENSCARG00000028247	irf1a (ENSCARG00000028355)	ddx21 (ENSCARG00000028414)	ENSCARG00000029235	ENSCARG00000029243	cgbb (ENSCARG00000029257)	ENSCARG00000029302	cox20 (ENSCARG00000029309)	ARFGEF3 (ENSCARG00000029339)	fbxo9 (ENSCARG00000029673)	elovl5 (ENSCARG00000029791)	gclc (ENSCARG00000029885)	klhl31 (ENSCARG00000032287)	ENSCARG00000032292	lrrc1 (ENSCARG00000032309) ##22	ENSCARG00000032442	ENSCARG00000032454	hcrtr2 (ENSCARG00000032461)	ENSCARG00000032492	hmgcll1 (ENSCARG00000032507)	bmp5 (ENSCARG00000032554)	ENSCARG00000029054	ENSCARG00000044229	ENSCARG00000044231	bag2 (ENSCARG00000044241)	rab23 (ENSCARG00000044249)	ENSCARG00000044260	ifngr1l (ENSCARG00000044280)	si:ch73-52p7.1 (ENSCARG00000044371)	olig3 (ENSCARG00000044396)
Zebrafish	MODERN SPECIES	4	EML4 (ENSDARG00000109443)	wu:fj16a03 (ENSDARG00000100952)	ENSDARG00000112522	XPO5 (ENSDARG00000098868)	ENSDARG00000074653	wdr11 (ENSDARG00000075245)	PLPP4 (ENSDARG00000098862)	lhb (ENSDARG00000099363)	cox20 (ENSDARG00000099997)	ARFGEF3 (ENSDARG00000077656)	fbxo9 (ENSDARG00000011055)	elovl5 (ENSDARG00000004979)	gclc (ENSDARG00000013095)	klhl31 (ENSDARG00000039066)	eloal (ENSDARG00000079957)	lrrc1 (ENSDARG00000102684) ##22	ENSDARG00000089920	FAM83B (ENSDARG00000078309)	hcrtr2 (ENSDARG00000023722)	ENSDARG00000089709	hmgcll1 (ENSDARG00000088740)	bmp5 (ENSDARG00000101701)	ENSDARG00000025320	ENSDARG00000074745	ENSDARG00000101858	ENSDARG00000115956	ENSDARG00000098631	ENSDARG00000102406	ENSDARG00000076939	bag2 (ENSDARG00000035005)	rab23 (ENSDARG00000004151)
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00940000164505.b	ENSGT00390000010094.b	ENSGT00940000157084.e.b	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318.c	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00990000204028.e	ENSGT01030000235197	ENSGT00940000160850
Channel catfish	MODERN SPECIES	22	ate1 (ENSIPUG00000015009)	fgfr2 (ENSIPUG00000015084)	WDR11 (ENSIPUG00000015297)	plpp4 (ENSIPUG00000015517)	lhb (ENSIPUG00000015549)	ENSIPUG00000015582	ENSIPUG00000015610	PTPRM (ENSIPUG00000015619)	ENSIPUG00000015628	fbxo9 (ENSIPUG00000015676)	elovl5 (ENSIPUG00000015710)	Gclc (ENSIPUG00000015773)	klhl31 (ENSIPUG00000015803)	ENSIPUG00000015812	ENSIPUG00000015840	LRRC1 (ENSIPUG00000015852) ##22	mlip (ENSIPUG00000015907)	fam83b (ENSIPUG00000015937)	hcrtr2 (ENSIPUG00000015966)	gfral (ENSIPUG00000015995)	bmp5 (ENSIPUG00000016011)	col21a1 (ENSIPUG00000016028)	ENSIPUG00000016187	DST (ENSIPUG00000016242)	ENSIPUG00000016405	ENSIPUG00000016436	znf451 (ENSIPUG00000016455)	bag2 (ENSIPUG00000016482)	rab23 (ENSIPUG00000016494)	ifngr1l (ENSIPUG00000016513)	si:ch73-52p7.1 (ENSIPUG00000016526)
Characiphysae_b	ANCESTRAL SPECIES	69	ENSGT00940000164505.b	ENSGT00390000010094.b	ENSGT00940000157084.e.b	ENSGT00500000044926	ENSGT00940000155447	ENSGT00390000004068	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00530000064150	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318.c	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00990000204028.e	ENSGT01030000235197	ENSGT00940000160850
Characoidei	ANCESTRAL SPECIES	93						ENSGT00390000004068	ENSGT00940000158288	ENSGT00940000161285.a	ENSGT00940000168267	ENSGT00940000168266	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889.g.a	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318.c	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00990000204028.e	ENSGT01030000235197	ENSGT00940000160850
Red-bellied piranha	MODERN SPECIES	31				ENSPNAG00000023209	ENSPNAG00000023219	wdr11 (ENSPNAG00000023368)	PLPP4 (ENSPNAG00000023399)	lhb (ENSPNAG00000023408)	cox20 (ENSPNAG00000023427)	ENSPNAG00000023513	fbxo9 (ENSPNAG00000023567)	elovl5 (ENSPNAG00000023600)	gclc (ENSPNAG00000023665)	klhl31 (ENSPNAG00000023686)	ENSPNAG00000023699	lrrc1 (ENSPNAG00000023749) ##22	ENSPNAG00000023793	FAM83B (ENSPNAG00000023843)	hcrtr2 (ENSPNAG00000006133)	ENSPNAG00000006247	hmgcll1 (ENSPNAG00000024006)	bmp5 (ENSPNAG00000024063)	ENSPNAG00000003806	ENSPNAG00000024132	ENSPNAG00000006656	ENSPNAG00000007002	DST (ENSPNAG00000024585)	ENSPNAG00000005368	bag2 (ENSPNAG00000024676)	rab23 (ENSPNAG00000024728)	ifngr1l (ENSPNAG00000024743)
Mexicana tetra	MODERN SPECIES	17	si:ch73-52p7.1 (ENSAMXG00000031047)	olig3 (ENSAMXG00000038663)	TNFAIP3 (ENSAMXG00000014966)	perp (ENSAMXG00000039864)	psmb1 (ENSAMXG00000033075)	dnaaf10 (ENSAMXG00000014971)	pno1 (ENSAMXG00000014973)	PPP3R1 (ENSAMXG00000033267)	cnrip1b (ENSAMXG00000031062)	fbxo9 (ENSAMXG00000012644)	elovl5 (ENSAMXG00000012674)	GCLC (ENSAMXG00000012685)	ENSAMXG00000029916	klhl31 (ENSAMXG00000012698)	ENSAMXG00000012716	lrrc1 (ENSAMXG00000005276) ##22	ENSAMXG00000043982	ENSAMXG00000021435	lgmn (ENSAMXG00000021444)	PCNX1 (ENSAMXG00000021460)	med6 (ENSAMXG00000021470)	TTC9 (ENSAMXG00000040789)	MAP3K9 (ENSAMXG00000021475)	ENSAMXG00000037928	slc8a3 (ENSAMXG00000021479)	cox16 (ENSAMXG00000038371)	actn1 (ENSAMXG00000039868)	dcaf5 (ENSAMXG00000031747)	pacs2 (ENSAMXG00000021511)	srsf5a (ENSAMXG00000030476)	ENSAMXG00000040847
Electric eel	MODERN SPECIES	19	slc29a1a (ENSEEEG00000021666)	ENSEEEG00000021655	TMEM63B (ENSEEEG00000021561)	ATE1 (ENSEEEG00000021549)	fgfr2 (ENSEEEG00000021417)	wdr11 (ENSEEEG00000021398)	PLPP4 (ENSEEEG00000021391)	lhb (ENSEEEG00000021389)	cox20 (ENSEEEG00000021388)	ARFGEF3 (ENSEEEG00000021384)	fbxo9 (ENSEEEG00000021367)	elovl5 (ENSEEEG00000021361)	gclc (ENSEEEG00000021342)	klhl31 (ENSEEEG00000021332)	ENSEEEG00000021330	ENSEEEG00000021327 ##22	rab2a (ENSEEEG00000021325)	ca8 (ENSEEEG00000021324)	tox (ENSEEEG00000021323)	cyp7a1 (ENSEEEG00000021322)	fam110b (ENSEEEG00000021320)	selenof (ENSEEEG00000021319)	hs2st1a (ENSEEEG00000021317)	zgc:56628 (ENSEEEG00000021307)	PKN2 (ENSEEEG00000021273)	gtf2b (ENSEEEG00000021249)	LRRC8D (ENSEEEG00000021243)	znf644a (ENSEEEG00000021240)	HFM1 (ENSEEEG00000021237)	CLDN18 (ENSEEEG00000021236)	SOX14 (ENSEEEG00000021235)
Osteoglossiformes	ANCESTRAL SPECIES	3	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000161750	ENSGT00940000158206	ENSGT00940000158807	ENSGT00390000014256	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00940000166866	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b
Asian bonytongue	MODERN SPECIES	19	mpc1 (ENSSFOG00015014411)	ENSSFOG00015014359	rnaset2 (ENSSFOG00015014347)	MYOM2 (ENSSFOG00015014019)	CSMD1 (ENSSFOG00015013854)	mcph1 (ENSSFOG00015013771)	angpt2a (ENSSFOG00015013803)	agpat5 (ENSSFOG00015030368)	tmem14a (ENSSFOG00015033155)	ENSSFOG00015013642	fbxo9 (ENSSFOG00015013553)	elovl5 (ENSSFOG00015013493)	gclc (ENSSFOG00015013425)	klhl31 (ENSSFOG00015013407)	ENSSFOG00015013388	lrrc1 (ENSSFOG00015013314) ##22	ENSSFOG00015024979	FAM83B (ENSSFOG00015029282)	hcrtr2 (ENSSFOG00015013162)	ENSSFOG00015013148	hmgcll1 (ENSSFOG00015013118)	bmp5 (ENSSFOG00015013107)	ENSSFOG00015013076	ENSSFOG00015012948	DST (ENSSFOG00015012783)	ENSSFOG00015012647	bag2 (ENSSFOG00015031144)	rab23 (ENSSFOG00015012604)	prim2 (ENSSFOG00015012535)	khdrbs2 (ENSSFOG00015012491)	ENSSFOG00015012467
P. kingsleyae	MODERN SPECIES	246	rnaset2 (ENSPKIG00000014931)	MYOM2 (ENSPKIG00000014999)	CSMD1 (ENSPKIG00000015248)	ENSPKIG00000015446	mcph1 (ENSPKIG00000015473)	angpt2a (ENSPKIG00000015512)	agpat5 (ENSPKIG00000015542)	ENSPKIG00000015561	tmem14a (ENSPKIG00000015581)	CILK1 (ENSPKIG00000015610)	fbxo9 (ENSPKIG00000015638)	elovl5 (ENSPKIG00000015687)	gclc (ENSPKIG00000015736)	klhl31 (ENSPKIG00000015800)	ENSPKIG00000015817	lrrc1 (ENSPKIG00000015846) ##22	ENSPKIG00000015925	FAM83B (ENSPKIG00000015977)	hcrtr2 (ENSPKIG00000015988)	hmgcll1 (ENSPKIG00000016016)	bmp5 (ENSPKIG00000016051)
Spotted gar	MODERN SPECIES	654	rnaset2 (ENSLOCG00000016824)	myom2a (ENSLOCG00000016832)	CSMD1 (ENSLOCG00000016854)	mcph1 (ENSLOCG00000016859)	angpt2a (ENSLOCG00000016861)	agpat5 (ENSLOCG00000016869)	tmem14a (ENSLOCG00000016876)	ENSLOCG00000016877	CILK1 (ENSLOCG00000016878)	fbxo9 (ENSLOCG00000016879)	GCM1 (ENSLOCG00000016883)	elovl5 (ENSLOCG00000016885)	gclc (ENSLOCG00000016888)	klhl31 (ENSLOCG00000016896)	ENSLOCG00000016897	lrrc1 (ENSLOCG00000016898) ##22	ENSLOCG00000016900	FAM83B (ENSLOCG00000016902)	hcrtr2 (ENSLOCG00000016905)	ENSLOCG00000016909	hmgcll1 (ENSLOCG00000016910)	bmp5 (ENSLOCG00000016915)	ENSLOCG00000016918	ENSLOCG00000016931	DST (ENSLOCG00000016933)	ZNF451 (ENSLOCG00000016996)	bag2 (ENSLOCG00000016997)	rab23 (ENSLOCG00000016999)	prim2 (ENSLOCG00000017003)	khdrbs2 (ENSLOCG00000017016)	ENSLOCG00000017017
Reedfish	MODERN SPECIES	6	GEMIN6 (ENSECRG00000021183)	DHX57 (ENSECRG00000021116)	ENSECRG00000021073	sos1 (ENSECRG00000021037)	RDH13 (ENSECRG00000020996)	MAP4K3 (ENSECRG00000020956)	tmem178a (ENSECRG00000020892)	THUMPD2 (ENSECRG00000020866)	slc8a1a (ENSECRG00000020557)	mrps5 (ENSECRG00000020485)	malb (ENSECRG00000020466)	ENSECRG00000020456	GCLC (ENSECRG00000020431)	klhl31 (ENSECRG00000020411)	ENSECRG00000020396	lrrc1 (ENSECRG00000020372) ##22	TINAG (ENSECRG00000020257)	FAM83B (ENSECRG00000020201)	hcrtr2 (ENSECRG00000019737)	ENSECRG00000019672	bmp5 (ENSECRG00000019614)	ENSECRG00000019567	DST (ENSECRG00000019117)	ENSECRG00000019507	ENSECRG00000018992	ZNF451 (ENSECRG00000018918)	bag2 (ENSECRG00000018883)	rab23 (ENSECRG00000018855)	prim2 (ENSECRG00000018812)	ENSECRG00000018714	khdrbs2 (ENSECRG00000018662)
Sarcopterygii	ANCESTRAL SPECIES	10	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00940000161065	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000154526.h	ENSGT00940000167375	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Aves	ANCESTRAL SPECIES	10	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000158430	ENSGT00390000018842	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h.ab	ENSGT00940000154526.h.`b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000166468	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Japanese quail	MODERN SPECIES	21	AGPAT5 (ENSCJPG00005007976)	TMEM14A (ENSCJPG00005007974)	ENSCJPG00005007965	ENSCJPG00005007935	ENSCJPG00005007914	ENSCJPG00005007886	ENSCJPG00005007859	ENSCJPG00005007857	CILK1 (ENSCJPG00005007855)	FBXO9 (ENSCJPG00005007854)	GCM1 (ENSCJPG00005007853)	ELOVL5 (ENSCJPG00005007852)	GCLC (ENSCJPG00005007850)	KLHL31 (ENSCJPG00005007849)	ENSCJPG00005007848	LRRC1 (ENSCJPG00005007828) ##22	MLIP (ENSCJPG00005007822)	TINAG (ENSCJPG00005007821)	FAM83B (ENSCJPG00005007806)	HCRTR2 (ENSCJPG00005007804)	GFRAL (ENSCJPG00005007801)	HMGCLL1 (ENSCJPG00005007799)	BMP5 (ENSCJPG00005007795)	ENSCJPG00005007793	ENSCJPG00005007776	ENSCJPG00005007770	ENSCJPG00005007768	ENSCJPG00005007767	ENSCJPG00005007577	BEND6 (ENSCJPG00005007572)	ZNF451 (ENSCJPG00005007567)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000158430	ENSGT00390000018842	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h.ab	ENSGT00940000154526.h.`b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153578.B.i	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Chicken	MODERN SPECIES	22	AGPAT5 (ENSGALG00010002239)	TMEM14A (ENSGALG00010002231)	GSTA2 (ENSGALG00010002197)	ENSGALG00010002792	GSTA3 (ENSGALG00010002782)	GSTA4 (ENSGALG00010002062)	ENSGALG00010002192	ENSGALG00010002475	CILK1 (ENSGALG00010002186)	FBXO9 (ENSGALG00010002177)	GCM1 (ENSGALG00010002173)	ELOVL5 (ENSGALG00010002135)	GCLC (ENSGALG00010002041)	KLHL31 (ENSGALG00010002024)	ENSGALG00010002006	LRRC1 (ENSGALG00010001995) ##22	MLIP (ENSGALG00010001971)	TINAG (ENSGALG00010001947)	FAM83B (ENSGALG00010001908)	HCRTR2 (ENSGALG00010001451)	GFRAL (ENSGALG00010001447)	HMGCLL1 (ENSGALG00010001441)	BMP5 (ENSGALG00010001471)	COL21A1 (ENSGALG00010002389)	ENSGALG00010002384	DST (ENSGALG00010002374)	BEND6 (ENSGALG00010002350)	ZNF451 (ENSGALG00010002347)	BAG2 (ENSGALG00010002342)	RAB23 (ENSGALG00010002340)	PRIM2 (ENSGALG00010002336)
Turkey	MODERN SPECIES	11	ENSMGAG00000013882	ENSMGAG00000013888	ENSMGAG00000013890	ENSMGAG00000018613	ENSMGAG00000017694	ENSMGAG00000019898	ENSMGAG00000023003	ENSMGAG00000013902	ENSMGAG00000013911	ENSMGAG00000013908	ENSMGAG00000021881	ENSMGAG00000013912	ENSMGAG00000013914	ENSMGAG00000013915	ENSMGAG00000013916	ENSMGAG00000013917 ##22	ENSMGAG00000013918	ENSMGAG00000017713	ENSMGAG00000013919	GCLC (ENSMGAG00000013920)	FBXO9 (ENSMGAG00000013928)	ENSMGAG00000013927	ELOVL5 (ENSMGAG00000013925)	ENSMGAG00000013930	ENSMGAG00000013935	ENSMGAG00000013940	GSTA1.1 (ENSMGAG00000013939)	ENSMGAG00000016435	ENSMGAG00000013943	ENSMGAG00000013948	ENSMGAG00000013946
Anatidae	ANCESTRAL SPECIES		ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000153578.B.i	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Duck	MODERN SPECIES	21	MCPH1 (ENSAPLG00000018704)	ANGPT2 (ENSAPLG00000005668)	AGPAT5 (ENSAPLG00000005525)	TMEM14A (ENSAPLG00000005510)	ENSAPLG00000005503	ENSAPLG00000005277	ENSAPLG00000026652	CILK1 (ENSAPLG00000004572)	FBXO9 (ENSAPLG00000004171)	GCM1 (ENSAPLG00000004160)	ELOVL5 (ENSAPLG00000003669)	GCLC (ENSAPLG00000003104)	KLHL31 (ENSAPLG00000003101)	ENSAPLG00000002982	ENSAPLG00000021048	LRRC1 (ENSAPLG00000002577) ##22	MLIP (ENSAPLG00000002307)	TINAG (ENSAPLG00000015513)	FAM83B (ENSAPLG00000015482)	HCRTR2 (ENSAPLG00000015204)	GFRAL (ENSAPLG00000015121)	HMGCLL1 (ENSAPLG00000014814)	BMP5 (ENSAPLG00000014765)	ENSAPLG00000003442	ENSAPLG00000019267	ENSAPLG00000017278	ENSAPLG00000020378	BEND6 (ENSAPLG00000003662)	ZNF451 (ENSAPLG00000003666)	BAG2 (ENSAPLG00000003712)	RAB23 (ENSAPLG00000003715)
Pink-footed goose	MODERN SPECIES	65	ENSABRG00000020727	ANGPT2 (ENSABRG00000020730)	AGPAT5 (ENSABRG00000020733)	TMEM14A (ENSABRG00000020737)	ENSABRG00000020741	ENSABRG00000020746	ENSABRG00000020750	ENSABRG00000020752	CILK1 (ENSABRG00000000376)	FBXO9 (ENSABRG00000000387)	GCM1 (ENSABRG00000000434)	ELOVL5 (ENSABRG00000000490)	GCLC (ENSABRG00000000518)	KLHL31 (ENSABRG00000000547)	ENSABRG00000000555	LRRC1 (ENSABRG00000000588) ##22	ENSABRG00000000603	ENSABRG00000000625	TINAG (ENSABRG00000000657)	FAM83B (ENSABRG00000000742)
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Kakapo	MODERN SPECIES	23	ANGPT2 (ENSSHBG00005021269)	ENSSHBG00005021268	AGPAT5 (ENSSHBG00005021267)	ENSSHBG00005021266	TMEM14A (ENSSHBG00005021265)	ENSSHBG00005021264	ENSSHBG00005021263	ENSSHBG00005021262	ENSSHBG00005021261	CILK1 (ENSSHBG00005021260)	FBXO9 (ENSSHBG00005021259)	GCM1 (ENSSHBG00005021258)	ELOVL5 (ENSSHBG00005021257)	GCLC (ENSSHBG00005021256)	KLHL31 (ENSSHBG00005021255)	LRRC1 (ENSSHBG00005021254) ##22	MLIP (ENSSHBG00005021251)	TINAG (ENSSHBG00005021250)	ENSSHBG00005021249	ENSSHBG00005021248	HCRTR2 (ENSSHBG00005021247)	ENSSHBG00005021246	GFRAL (ENSSHBG00005021245)	HMGCLL1 (ENSSHBG00005021244)	BMP5 (ENSSHBG00005021243)	ENSSHBG00005021242	DST (ENSSHBG00005008096)	BEND6 (ENSSHBG00005002589)	ENSSHBG00005002570	ZNF451 (ENSSHBG00005002551)	BAG2 (ENSSHBG00005002532)
Golden eagle	MODERN SPECIES	6	ENSACCG00020008623	ANGPT2 (ENSACCG00020008648)	AGPAT5 (ENSACCG00020008672)	TMEM14A (ENSACCG00020008709)	ENSACCG00020008741	ENSACCG00020008770	ENSACCG00020008800	ENSACCG00020008838	CILK1 (ENSACCG00020008864)	FBXO9 (ENSACCG00020008910)	GCM1 (ENSACCG00020008934)	ELOVL5 (ENSACCG00020008948)	GCLC (ENSACCG00020009005)	KLHL31 (ENSACCG00020009029)	ENSACCG00020009040	LRRC1 (ENSACCG00020009094) ##22	MLIP (ENSACCG00020009195)	TINAG (ENSACCG00020009242)	FAM83B (ENSACCG00020009267)	HCRTR2 (ENSACCG00020009292)	GFRAL (ENSACCG00020009325)	HMGCLL1 (ENSACCG00020009341)	BMP5 (ENSACCG00020009354)	ENSACCG00020009368	ENSACCG00020009392	DST (ENSACCG00020014224)	BEND6 (ENSACCG00020016641)	DDIT3 (ENSACCG00020016642)	MARS1 (ENSACCG00020016651)	ARHGAP9 (ENSACCG00020016663)	ENSACCG00020016675
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Great tit	MODERN SPECIES	22	CSMD1 (ENSPMJG00000009412)	ANGPT2 (ENSPMJG00000009324)	MCPH1 (ENSPMJG00000009320)	AGPAT5 (ENSPMJG00000009275)	TMEM14A (ENSPMJG00000009273)	ENSPMJG00000009272	ENSPMJG00000009271	ENSPMJG00000009269	CILK1 (ENSPMJG00000009263)	FBXO9 (ENSPMJG00000009261)	GCM1 (ENSPMJG00000009258)	ELOVL5 (ENSPMJG00000009256)	GCLC (ENSPMJG00000009196)	KLHL31 (ENSPMJG00000009190)	ENSPMJG00000009180	LRRC1 (ENSPMJG00000008931) ##22	MLIP (ENSPMJG00000008922)	TINAG (ENSPMJG00000008921)	FAM83B (ENSPMJG00000008918)	HCRTR2 (ENSPMJG00000008916)	GFRAL (ENSPMJG00000008914)	HMGCLL1 (ENSPMJG00000008912)	BMP5 (ENSPMJG00000008908)	COL21A1 (ENSPMJG00000008906)	ENSPMJG00000008898 #19	DST (ENSPMJG00000008879)	BEND6 (ENSPMJG00000008875)	ZNF451 (ENSPMJG00000008873)	BAG2 (ENSPMJG00000008872)	RAB23 (ENSPMJG00000008871)	PRIM2 (ENSPMJG00000008867)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Zebra finch	MODERN SPECIES	23	CSMD1 (ENSTGUG00000012896)	MCPH1 (ENSTGUG00000012890)	ANGPT2 (ENSTGUG00000012892)	AGPAT5 (ENSTGUG00000012889)	TMEM14A (ENSTGUG00000012888)	ENSTGUG00000019689	ENSTGUG00000012878	ENSTGUG00000012876	CILK1 (ENSTGUG00000012875)	FBXO9 (ENSTGUG00000012870)	GCM1 (ENSTGUG00000012867)	ELOVL5 (ENSTGUG00000012864)	GCLC (ENSTGUG00000012854)	KLHL31 (ENSTGUG00000012853)	ENSTGUG00000024347	LRRC1 (ENSTGUG00000012849) ##22	MLIP (ENSTGUG00000012847)	TINAG (ENSTGUG00000012846)	FAM83B (ENSTGUG00000012844)	HCRTR2 (ENSTGUG00000012840)	GFRAL (ENSTGUG00000012837)	HMGCLL1 (ENSTGUG00000012832)	BMP5 (ENSTGUG00000012830)	COL21A1 (ENSTGUG00000012827)	DST (ENSTGUG00000012802)	BEND6 (ENSTGUG00000012798)	ZNF451 (ENSTGUG00000012796)	BAG2 (ENSTGUG00000024754)	RAB23 (ENSTGUG00000026896)	PRIM2 (ENSTGUG00000012790)	KHDRBS2 (ENSTGUG00000012786)
Common canary	MODERN SPECIES	1	CSMD1 (ENSSCAG00000011470)	ANGPT2 (ENSSCAG00000011411)	ENSSCAG00000011405	AGPAT5 (ENSSCAG00000011389)	TMEM14A (ENSSCAG00000011385)	ENSSCAG00000011382	ENSSCAG00000011375	ENSSCAG00000011367	ENSSCAG00000011350	CILK1 (ENSSCAG00000011319)	FBXO9 (ENSSCAG00000011304)	GCM1 (ENSSCAG00000011291)	ELOVL5 (ENSSCAG00000011279)	GCLC (ENSSCAG00000011268)	KLHL31 (ENSSCAG00000011264)	LRRC1 (ENSSCAG00000011165) ##22	MLIP (ENSSCAG00000011078)	TINAG (ENSSCAG00000011044)	FAM83B (ENSSCAG00000011035)	HCRTR2 (ENSSCAG00000011024)	GFRAL (ENSSCAG00000011022)	HMGCLL1 (ENSSCAG00000010956)	BMP5 (ENSSCAG00000010933)	ENSSCAG00000010926	ENSSCAG00000010916	DST (ENSSCAG00000010156)	ENSSCAG00000009010	BEND6 (ENSSCAG00000008845)	ZNF451 (ENSSCAG00000008838)	BAG2 (ENSSCAG00000008803)	RAB23 (ENSSCAG00000008800)
Medium ground finch	MODERN SPECIES	163							ENSGFOG00000007797	ENSGFOG00000007803	ENSGFOG00000007811	CILK1 (ENSGFOG00000007824)	FBXO9 (ENSGFOG00000007848)	GCM1 (ENSGFOG00000007856)	ELOVL5 (ENSGFOG00000007864)	GCLC (ENSGFOG00000007876)	KLHL31 (ENSGFOG00000007890)	LRRC1 (ENSGFOG00000007904) ##22	ENSGFOG00000007917	TINAG (ENSGFOG00000007928)	FAM83B (ENSGFOG00000007943)	HCRTR2 (ENSGFOG00000007966)	GFRAL (ENSGFOG00000007980)	HMGCLL1 (ENSGFOG00000007997)	BMP5 (ENSGFOG00000008066)	ENSGFOG00000008079	DST (ENSGFOG00000008094)	ENSGFOG00000008168	ENSGFOG00000008196	ENSGFOG00000008201
Flycatcher	MODERN SPECIES	21	ENSFALG00000025261	CSMD1 (ENSFALG00000001902)	ENSFALG00000025903	ENSFALG00000026921	ANGPT2 (ENSFALG00000001888)	AGPAT5 (ENSFALG00000024305)	TMEM14A (ENSFALG00000001879)	ENSFALG00000001877	ENSFALG00000001862	CILK1 (ENSFALG00000001859)	FBXO9 (ENSFALG00000001856)	ELOVL5 (ENSFALG00000028161)	GCLC (ENSFALG00000001850)	KLHL31 (ENSFALG00000026762)	ENSFALG00000023409	LRRC1 (ENSFALG00000001846) ##22	MLIP (ENSFALG00000001844)	TINAG (ENSFALG00000001840)	FAM83B (ENSFALG00000001838)	HCRTR2 (ENSFALG00000001831)	GFRAL (ENSFALG00000001829)	HMGCLL1 (ENSFALG00000001827)	BMP5 (ENSFALG00000001825)	ENSFALG00000001818	ENSFALG00000028270	ENSFALG00000001762	ENSFALG00000025710	ENSFALG00000028984	ENSFALG00000027790	BEND6 (ENSFALG00000001729)	ZNF451 (ENSFALG00000001720)
African ostrich	MODERN SPECIES	1039							ENSSCUG00000016945	ENSSCUG00000016948	CILK1 (ENSSCUG00000016950)	FBXO9 (ENSSCUG00000016952)	GCM1 (ENSSCUG00000016954)	ELOVL5 (ENSSCUG00000016955)	GCLC (ENSSCUG00000016867)	KLHL31 (ENSSCUG00000016872)	ENSSCUG00000016873	LRRC1 (ENSSCUG00000016877) ##22	MLIP (ENSSCUG00000016888)	TINAG (ENSSCUG00000016897)	ENSSCUG00000016900	FAM83B (ENSSCUG00000016902)	HCRTR2 (ENSSCUG00000016904)	GFRAL (ENSSCUG00000016906)	HMGCLL1 (ENSSCUG00000016907)	BMP5 (ENSSCUG00000016911)	ENSSCUG00000016912	ENSSCUG00000016914	DST (ENSSCUG00000017504)	BEND6 (ENSSCUG00000018380)	ZNF451 (ENSSCUG00000018382)	BAG2 (ENSSCUG00000018384)	RAB23 (ENSSCUG00000018386)
Australian saltwater crocodile	MODERN SPECIES	38	TMEM14A (ENSCPRG00005010346)	ENSCPRG00005010349	ENSCPRG00005010362	ENSCPRG00005010497	ENSCPRG00005010569	ENSCPRG00005010601	ENSCPRG00005010637	ENSCPRG00005010643	CILK1 (ENSCPRG00005010652)	FBXO9 (ENSCPRG00005010667)	GCM1 (ENSCPRG00005010674)	ELOVL5 (ENSCPRG00005010679)	GCLC (ENSCPRG00005010687)	ENSCPRG00005010697	KLHL31 (ENSCPRG00005010699)	LRRC1 (ENSCPRG00005010701) ##22	MLIP (ENSCPRG00005010722)	FAM83B (ENSCPRG00005010750)	ENSCPRG00005010760	ENSCPRG00005010765	GFRAL (ENSCPRG00005010766)	HMGCLL1 (ENSCPRG00005010772)	BMP5 (ENSCPRG00005010785)	ENSCPRG00005010792	DST (ENSCPRG00005010882)	ENSCPRG00005011741	BEND6 (ENSCPRG00005012392)	ZNF451 (ENSCPRG00005012406)	BAG2 (ENSCPRG00005012416)	RAB23 (ENSCPRG00005012420)	PRIM2 (ENSCPRG00005012444)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Chinese turtle	MODERN SPECIES	2216	AGPAT5 (ENSPSIG00000015856)	TMEM14A (ENSPSIG00000015718)	ENSPSIG00000015714	ENSPSIG00000000062	ENSPSIG00000015454	ENSPSIG00000015195	ENSPSIG00000015167	CILK1 (ENSPSIG00000015006)	FBXO9 (ENSPSIG00000013542)	ENSPSIG00000000061	GCM1 (ENSPSIG00000013518)	ELOVL5 (ENSPSIG00000012674)	GCLC (ENSPSIG00000012560)	KLHL31 (ENSPSIG00000012338)	ENSPSIG00000012040	LRRC1 (ENSPSIG00000011535) ##22
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000155701.D	ENSGT00390000018842.m	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000158431.a.a.a.a.a.b	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT01060000252117	ENSGT00940000158430	ENSGT00390000018842.m	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000158431.a.a.a.a.a.b	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Three-toed box turtle	MODERN SPECIES	15	ENSTMTG00000000480	ANGPT2 (ENSTMTG00000000416)	MCPH1 (ENSTMTG00000000372)	AGPAT5 (ENSTMTG00000000344)	TMEM14A (ENSTMTG00000000318)	ENSTMTG00000000251	ENSTMTG00000000106	ENSTMTG00000000052	CILK1 (ENSTMTG00000023148)	FBXO9 (ENSTMTG00000023147)	GCM1 (ENSTMTG00000023146)	ELOVL5 (ENSTMTG00000023145)	GCLC (ENSTMTG00000023144)	KLHL31 (ENSTMTG00000023143)	ENSTMTG00000023142	LRRC1 (ENSTMTG00000023141) ##22	MLIP (ENSTMTG00000023140)	FAM83B (ENSTMTG00000023139)	HCRTR2 (ENSTMTG00000023138)	GFRAL (ENSTMTG00000023137)	HMGCLL1 (ENSTMTG00000023136)	BMP5 (ENSTMTG00000023135)	ENSTMTG00000023134	ENSTMTG00000023133	DST (ENSTMTG00000023117)	BEND6 (ENSTMTG00000022049)	ZNF451 (ENSTMTG00000022031)	BAG2 (ENSTMTG00000022021)	RAB23 (ENSTMTG00000022015)	PRIM2 (ENSTMTG00000022005)	KHDRBS2 (ENSTMTG00000021993)
painted turtle	MODERN SPECIES	2407	ENSCPBG00000021990	CSMD1 (ENSCPBG00000021999)	ENSCPBG00000022011	ENSCPBG00000022016	ENSCPBG00000022017	ANGPT2 (ENSCPBG00000022020)	AGPAT5 (ENSCPBG00000022025)	ENSCPBG00000022029	CILK1 (ENSCPBG00000022030)	FBXO9 (ENSCPBG00000022033)	GCM1 (ENSCPBG00000022035)	ELOVL5 (ENSCPBG00000022037)	GCLC (ENSCPBG00000022040)	KLHL31 (ENSCPBG00000022044)	ENSCPBG00000022045	LRRC1 (ENSCPBG00000022047) ##22	MLIP (ENSCPBG00000022049)	ENSCPBG00000022058	FAM83B (ENSCPBG00000022063)	HCRTR2 (ENSCPBG00000022065)	GFRAL (ENSCPBG00000022069)	HMGCLL1 (ENSCPBG00000022071)	BMP5 (ENSCPBG00000022075)	ENSCPBG00000022081	ENSCPBG00000022088	DST (ENSCPBG00000022151)	ENSCPBG00000022477	BEND6 (ENSCPBG00000022618)	ZNF451 (ENSCPBG00000022625)	BAG2 (ENSCPBG00000022638)	RAB23 (ENSCPBG00000022640)
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842.m	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000158431.a.a.a.a.a.b	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134.a	ENSGT00950000183045.A.a.b	ENSGT00390000013639
Abingdon island giant tortoise	MODERN SPECIES	1171															KLHL31 (ENSCABG00000002469)	LRRC1 (ENSCABG00000002470) ##22
Goode s thornscrub tortoise	MODERN SPECIES	17	MYOM2 (ENSGEVG00005000599)	CSMD1 (ENSGEVG00005000881)	ENSGEVG00005001141	ENSGEVG00005001164	ANGPT2 (ENSGEVG00005001183)	AGPAT5 (ENSGEVG00005001198)	ENSGEVG00005001219	ENSGEVG00005001245	ENSGEVG00005001294	CILK1 (ENSGEVG00005001343)	FBXO9 (ENSGEVG00005001385)	GCM1 (ENSGEVG00005001399)	ELOVL5 (ENSGEVG00005001413)	GCLC (ENSGEVG00005001438)	KLHL31 (ENSGEVG00005001465)	LRRC1 (ENSGEVG00005001481) ##22	ENSGEVG00005001497	FAM83B (ENSGEVG00005001526)	HCRTR2 (ENSGEVG00005001579)	GFRAL (ENSGEVG00005001623)	HMGCLL1 (ENSGEVG00005001653)	BMP5 (ENSGEVG00005001672)	ENSGEVG00005001692	ENSGEVG00005001762	ENSGEVG00005001883	ENSGEVG00005001901	ENSGEVG00005001911	BEND6 (ENSGEVG00005001934)	ZNF451 (ENSGEVG00005001993)	BAG2 (ENSGEVG00005002046)	RAB23 (ENSGEVG00005002058)
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000167375	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
tuatara	MODERN SPECIES	660																LRRC1 (ENSSPUG00000006831) ##22	ENSSPUG00000006799	TINAG (ENSSPUG00000006707)	FAM83B (ENSSPUG00000006653)	HCRTR2 (ENSSPUG00000006601)	HMGCLL1 (ENSSPUG00000006564)	BMP5 (ENSSPUG00000006541)	ENSSPUG00000006522	ENSSPUG00000006511	ENSSPUG00000006506	ENSSPUG00000006497	ENSSPUG00000006489	ENSSPUG00000006448	ENSSPUG00000006422	ENSSPUG00000006409	ENSSPUG00000006398
Episquamata	ANCESTRAL SPECIES		ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000167375	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00990000210803	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000161983	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00990000210803	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164160	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Elapidae	ANCESTRAL SPECIES		ENSGT00940000161983	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT01030000235399	ENSGT00390000018842	ENSGT00940000158430	ENSGT00940000158206	ENSGT00950000182836.b.a.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00990000210803	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000164076.b	ENSGT00940000153769.C	ENSGT00940000155008.C.bb.a	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00940000161983	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT01030000235399	ENSGT00390000018842	ENSGT00940000158430	ENSGT00940000158206	ENSGT00950000182836.b.a.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C.bb.a.b	ENSGT00940000155008.C.bb.a.a	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00940000155701.D	ENSGT01030000235399	ENSGT00390000018842	ENSGT00940000158430	ENSGT00950000186209.a	ENSGT00940000158206	ENSGT00940000160148.d	ENSGT00950000182836.b.a.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C.bb.a.b	ENSGT00940000155008.C.cb	ENSGT00940000155008.C.bb.a.a	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Eastern brown snake	MODERN SPECIES	4	ENSPTXG00000009189	ANGPT2 (ENSPTXG00000009187)	ENSPTXG00000009186	TMEM14A (ENSPTXG00000009185)	ENSPTXG00000009184	ENSPTXG00000009182	ENSPTXG00000009181	AGPAT5 (ENSPTXG00000009179)	ENSPTXG00000008897	CILK1 (ENSPTXG00000008893)	FBXO9 (ENSPTXG00000008891)	GCM1 (ENSPTXG00000008890)	ELOVL5 (ENSPTXG00000008889)	GCLC (ENSPTXG00000008888)	KLHL31 (ENSPTXG00000008887)	LRRC1 (ENSPTXG00000008886) ##22	ENSPTXG00000008884	ENSPTXG00000008882	ENSPTXG00000008880	ENSPTXG00000008879	HCRTR2 (ENSPTXG00000008877)	GFRAL (ENSPTXG00000008876)	HMGCLL1 (ENSPTXG00000008875)	BMP5 (ENSPTXG00000008874)	ENSPTXG00000008868	ENSPTXG00000008854	ENSPTXG00000008849	ENSPTXG00000008846	ZNF451 (ENSPTXG00000008843)	BAG2 (ENSPTXG00000008841)	RAB23 (ENSPTXG00000008840)
Mainland tiger snake	MODERN SPECIES	11	ENSNSUG00000007532	TMEM14A (ENSNSUG00000007531)	ENSNSUG00000007530	ENSNSUG00000007529	ENSNSUG00000007527	ENSNSUG00000007525	ENSNSUG00000007522	AGPAT5 (ENSNSUG00000007521)	ENSNSUG00000006924	CILK1 (ENSNSUG00000006917)	FBXO9 (ENSNSUG00000006891)	GCM1 (ENSNSUG00000006890)	ELOVL5 (ENSNSUG00000006888)	GCLC (ENSNSUG00000006887)	KLHL31 (ENSNSUG00000006886)	LRRC1 (ENSNSUG00000006885) ##22	MLIP (ENSNSUG00000006867)	ENSNSUG00000006866	FAM83B (ENSNSUG00000006865)	HCRTR2 (ENSNSUG00000006863)	GFRAL (ENSNSUG00000006854)	HMGCLL1 (ENSNSUG00000006838)	BMP5 (ENSNSUG00000006835)	ENSNSUG00000006831	ENSNSUG00000006793	ENSNSUG00000006792	ENSNSUG00000006783	ENSNSUG00000006771	ENSNSUG00000006768	ZNF451 (ENSNSUG00000006750)	BAG2 (ENSNSUG00000006742)
Indian cobra	MODERN SPECIES		MYOM2 (ENSNNAG00000008872)	CSMD1 (ENSNNAG00000007545)	ENSNNAG00000007445	ENSNNAG00000007426	ANGPT2 (ENSNNAG00000007403)	TMEM14A (ENSNNAG00000007383)	ENSNNAG00000007297	AGPAT5 (ENSNNAG00000007255)	ENSNNAG00000007238	CILK1 (ENSNNAG00000007179)	FBXO9 (ENSNNAG00000007130)	GCM1 (ENSNNAG00000007108)	ELOVL5 (ENSNNAG00000007090)	GCLC (ENSNNAG00000007066)	KLHL31 (ENSNNAG00000007051)	LRRC1 (ENSNNAG00000007017) ##22	ENSNNAG00000007006	TINAG (ENSNNAG00000006943)	FAM83B (ENSNNAG00000006843)	HCRTR2 (ENSNNAG00000006803)	ENSNNAG00000006781	GFRAL (ENSNNAG00000006744)	HMGCLL1 (ENSNNAG00000006721)	BMP5 (ENSNNAG00000006696)	ENSNNAG00000006684	ENSNNAG00000006672	ENSNNAG00000016364 #19	DST (ENSNNAG00000015977)	ZNF451 (ENSNNAG00000015890)	BAG2 (ENSNNAG00000015881)	RAB23 (ENSNNAG00000015866)
Lizard	MODERN SPECIES	956																LRRC1 (ENSACAG00000016633) ##22	ENSACAG00000042006	MLIP (ENSACAG00000016710)	ENSACAG00000039548	TINAG (ENSACAG00000016719)	ENSACAG00000034953	FAM83B (ENSACAG00000016759)	HCRTR2 (ENSACAG00000016765)	GFRAL (ENSACAG00000016788)	HMGCLL1 (ENSACAG00000016794)	ENSACAG00000037622	BMP5 (ENSACAG00000016825)	ENSACAG00000016827	ENSACAG00000036548	rnaseh1 (ENSACAG00000016857)	rps7 (ENSACAG00000034590)
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000155701.D	ENSGT00390000018842.l	ENSGT00390000018842.k	ENSGT00940000158430	ENSGT00950000182836.b.a.a	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000167375	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908.k	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00990000210803	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000155008.C
Argentine black and white tegu	MODERN SPECIES	9	ENSSMRG00000011118	MCPH1 (ENSSMRG00000011212)	ANGPT2 (ENSSMRG00000011214)	ENSSMRG00000011259	TMEM14A (ENSSMRG00000011267)	ENSSMRG00000011271	ENSSMRG00000011284	ENSSMRG00000011345	ENSSMRG00000011350	CILK1 (ENSSMRG00000011355)	FBXO9 (ENSSMRG00000011358)	GCM1 (ENSSMRG00000011363)	ELOVL5 (ENSSMRG00000011366)	GCLC (ENSSMRG00000011456)	KLHL31 (ENSSMRG00000011465)	LRRC1 (ENSSMRG00000011501) ##22	MLIP (ENSSMRG00000011509)	ENSSMRG00000011518	FAM83B (ENSSMRG00000011522)	HCRTR2 (ENSSMRG00000011564)	GFRAL (ENSSMRG00000011565)	HMGCLL1 (ENSSMRG00000011567)	BMP5 (ENSSMRG00000011578)	ENSSMRG00000011657	DST (ENSSMRG00000011736)	ENSSMRG00000011760 #19	ZNF451 (ENSSMRG00000011761)	BAG2 (ENSSMRG00000011790)	RAB23 (ENSSMRG00000011791)	PRIM2 (ENSSMRG00000011806)	KHDRBS2 (ENSSMRG00000011860)
Common wall lizard	MODERN SPECIES	11	LRATD1 (ENSPMRG00000002649)	NBAS (ENSPMRG00000003021)	DDX1 (ENSPMRG00000004051)	MYCN (ENSPMRG00000004070)	ENSPMRG00000004072	CYRIA (ENSPMRG00000004077)	ENSPMRG00000004100	ENSPMRG00000004120	ENSPMRG00000004127	CILK1 (ENSPMRG00000004130)	FBXO9 (ENSPMRG00000004159)	GCM1 (ENSPMRG00000004210)	ELOVL5 (ENSPMRG00000004222)	ENSPMRG00000004239	KLHL31 (ENSPMRG00000004273)	LRRC1 (ENSPMRG00000004301) ##22	MLIP (ENSPMRG00000004371)	TINAG (ENSPMRG00000004424)	FAM83B (ENSPMRG00000004438)	HCRTR2 (ENSPMRG00000004443)	ENSPMRG00000004447	GFRAL (ENSPMRG00000004451)	HMGCLL1 (ENSPMRG00000004461)	BMP5 (ENSPMRG00000004482)	COL21A1 (ENSPMRG00000004492)	ENSPMRG00000004510	ENSPMRG00000004513	ENSPMRG00000004517	DST (ENSPMRG00000004698)	ZNF451 (ENSPMRG00000005882)	BAG2 (ENSPMRG00000005887)
Mammalia	ANCESTRAL SPECIES	2						ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Theria	ANCESTRAL SPECIES	4	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000161750	ENSGT00940000154526.h	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Diprotodontia	ANCESTRAL SPECIES	37	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Diprotodontia_a	ANCESTRAL SPECIES	36	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206.f	ENSGT00940000166012.a.a	ENSGT00940000166012.b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
koala	MODERN SPECIES	54	PAQR8 (ENSPCIG00000037305)	EFHC1 (ENSPCIG00000003906)	TRAM2 (ENSPCIG00000003947)	ENSPCIG00000013272	ENSPCIG00000003985	ENSPCIG00000013280	ENSPCIG00000032157	ENSPCIG00000030864	CILK1 (ENSPCIG00000034988)	FBXO9 (ENSPCIG00000012476)	GCM1 (ENSPCIG00000012474)	ELOVL5 (ENSPCIG00000012473)	ENSPCIG00000018142	GCLC (ENSPCIG00000018141)	KLHL31 (ENSPCIG00000018139)	LRRC1 (ENSPCIG00000018005) ##22	ENSPCIG00000018001	ENSPCIG00000017998	ENSPCIG00000017997	TINAG (ENSPCIG00000017996)
Common wonbat	MODERN SPECIES	613						ENSVURG00010009266	ENSVURG00010009297	ENSVURG00010009352	ENSVURG00010009359	ENSVURG00010009373	CILK1 (ENSVURG00010009384)	FBXO9 (ENSVURG00010009402)	ELOVL5 (ENSVURG00010009419)	GCLC (ENSVURG00010009432)	KLHL31 (ENSVURG00010009453)	LRRC1 (ENSVURG00010009485) ##22	ENSVURG00010009535	ENSVURG00010009545	TINAG (ENSVURG00010009613)	FAM83B (ENSVURG00010010406)	HCRTR2 (ENSVURG00010010421)	ENSVURG00010010542	HMGCLL1 (ENSVURG00010010557)	BMP5 (ENSVURG00010010582)	ENSVURG00010010604	DST (ENSVURG00010010667)	ZNF451 (ENSVURG00010010995)	ENSVURG00010011270	BAG2 (ENSVURG00010011294)	RAB23 (ENSVURG00010011304)	PRIM2 (ENSVURG00010011309)
Wallaby	MODERN SPECIES	4393																LRRC1 (ENSMEUG00000009519) ##22
Tasmanian devil	MODERN SPECIES	3	IL17A (ENSSHAG00000012109)	ENSSHAG00000032353	MCM3 (ENSSHAG00000012437)	PAQR8 (ENSSHAG00000031854)	EFHC1 (ENSSHAG00000013635)	TRAM2 (ENSSHAG00000014037)	TMEM14A (ENSSHAG00000014906)	ENSSHAG00000026000	ENSSHAG00000028098	CILK1 (ENSSHAG00000015447)	FBXO9 (ENSSHAG00000015737)	GCM1 (ENSSHAG00000015905)	ELOVL5 (ENSSHAG00000028536)	GCLC (ENSSHAG00000016777)	KLHL31 (ENSSHAG00000017310)	LRRC1 (ENSSHAG00000017632) ##22	ENSSHAG00000031578	TINAG (ENSSHAG00000018382)	FAM83B (ENSSHAG00000029078)	HCRTR2 (ENSSHAG00000032151)	ENSSHAG00000024248	HMGCLL1 (ENSSHAG00000032062)	BMP5 (ENSSHAG00000009325)	ENSSHAG00000012189	ENSSHAG00000029627	ENSSHAG00000014250	ZNF451 (ENSSHAG00000003028)	BAG2 (ENSSHAG00000024835)	RAB23 (ENSSHAG00000006379)	PRIM2 (ENSSHAG00000001863)	ENSSHAG00000023090
Opossum	MODERN SPECIES	1	PAQR8 (ENSMODG00000023518)	EFHC1 (ENSMODG00000018819)	TRAM2 (ENSMODG00000018818)	ENSMODG00000039234	ENSMODG00000018815	ENSMODG00000018812	ENSMODG00000018813	CILK1 (ENSMODG00000018808)	FBXO9 (ENSMODG00000018806)	GCM1 (ENSMODG00000018803)	ELOVL5 (ENSMODG00000018802)	ENSMODG00000046779	GCLC (ENSMODG00000018800)	KLHL31 (ENSMODG00000018798)	ENSMODG00000018795	LRRC1 (ENSMODG00000018794) ##22	MLIP (ENSMODG00000018791)	TINAG (ENSMODG00000018790)	ENSMODG00000018789	FAM83B (ENSMODG00000041116)	HCRTR2 (ENSMODG00000018787)	ENSMODG00000018785	HMGCLL1 (ENSMODG00000018784)	BMP5 (ENSMODG00000018782)	ENSMODG00000045608	ENSMODG00000018777	ENSMODG00000051305	ENSMODG00000039418	ENSMODG00000028308	ENSMODG00000039140	ENSMODG00000044859
Eutheria	ANCESTRAL SPECIES	9	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154025.b ##22
Common shrew	MODERN SPECIES	2599																ENSSARG00000012480 ##22
Hedgehog	MODERN SPECIES	3459																LRRC1 (ENSEEUG00000003707) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Equus	ANCESTRAL SPECIES	10	ENSGT00940000165202.C.l	ENSGT00940000158206	ENSGT00940000154526.h.v	ENSGT00940000164319	ENSGT00940000154526.h.u.a.b.a.b	ENSGT00940000154526.h.u.a.a.a	ENSGT00940000154526.h.u.b	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Donkey	MODERN SPECIES	28	ENSEASG00005028323	ENSEASG00005027355	ENSEASG00005024395	ENSEASG00005004299	ENSEASG00005030146	ENSEASG00005024056	ENSEASG00005027189	ENSEASG00005019712	GSTA4 (ENSEASG00005019714)	CILK1 (ENSEASG00005019720)	FBXO9 (ENSEASG00005019722)	GCM1 (ENSEASG00005024118)	ELOVL5 (ENSEASG00005019728)	GCLC (ENSEASG00005019731)	KLHL31 (ENSEASG00005019733)	LRRC1 (ENSEASG00005019734) ##22	MLIP (ENSEASG00005019737)	TINAG (ENSEASG00005019740)	FAM83B (ENSEASG00005019743)	HCRTR2 (ENSEASG00005019746)	GFRAL (ENSEASG00005000112)	HMGCLL1 (ENSEASG00005000182)	BMP5 (ENSEASG00005000189)	COL21A1 (ENSEASG00005000196)	ENSEASG00005000360	ENSEASG00005002729	ENSEASG00005023996	BEND6 (ENSEASG00005003455)	KIAA1586 (ENSEASG00005003459)	ZNF451 (ENSEASG00005003471)	BAG2 (ENSEASG00005032327)
Horse	MODERN SPECIES	12	ENSECAG00000039093	ENSECAG00000059890	ENSECAG00000055342	GSTA3 (ENSECAG00000030691)	ENSECAG00000051447	ENSECAG00000053489	ENSECAG00000052043	GSTA4 (ENSECAG00000019037)	CILK1 (ENSECAG00000021987)	ENSECAG00000052794	FBXO9 (ENSECAG00000007346)	GCM1 (ENSECAG00000014228)	ELOVL5 (ENSECAG00000014755)	GCLC (ENSECAG00000017346)	KLHL31 (ENSECAG00000011551)	LRRC1 (ENSECAG00000012196) ##22	MLIP (ENSECAG00000016380)	TINAG (ENSECAG00000019101)	FAM83B (ENSECAG00000024109)	HCRTR2 (ENSECAG00000024250)	GFRAL (ENSECAG00000024885)	HMGCLL1 (ENSECAG00000000662)	BMP5 (ENSECAG00000007138)	COL21A1 (ENSECAG00000009887)	ENSECAG00000027991	DST (ENSECAG00000016469)	BEND6 (ENSECAG00000008079)	KIAA1586 (ENSECAG00000046439)	ZNF451 (ENSECAG00000009633)	RAB23 (ENSECAG00000013427)	PRIM2 (ENSECAG00000015791)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Megabat	MODERN SPECIES	781																LRRC1 (ENSPVAG00000008229) ##22
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Microbat	MODERN SPECIES	1017														ENSMLUG00000023145	ENSMLUG00000029414	LRRC1 (ENSMLUG00000008118) ##22	MLIP (ENSMLUG00000008145)	TINAG (ENSMLUG00000016940)	FAM83B (ENSMLUG00000006727)	ENSMLUG00000024260	HCRTR2 (ENSMLUG00000012103)	GFRAL (ENSMLUG00000012114)	HMGCLL1 (ENSMLUG00000002703)	BMP5 (ENSMLUG00000004021)	COL21A1 (ENSMLUG00000004388)	ENSMLUG00000027092	DST (ENSMLUG00000005610)	ENSMLUG00000030379	BEND6 (ENSMLUG00000001178)	ENSMLUG00000023844	ZNF451 (ENSMLUG00000004044)
Greater horseshoe bat	MODERN SPECIES	21	IL17F (ENSRFEG00010010852)	MCM3 (ENSRFEG00010010927)	PAQR8 (ENSRFEG00010011220)	EFHC1 (ENSRFEG00010011237)	TRAM2 (ENSRFEG00010011364)	TMEM14A (ENSRFEG00010011433)	ENSRFEG00010011486	ENSRFEG00010011511	GSTA4 (ENSRFEG00010011544)	CILK1 (ENSRFEG00010011638)	FBXO9 (ENSRFEG00010011690)	GCM1 (ENSRFEG00010011767)	ELOVL5 (ENSRFEG00010011860)	GCLC (ENSRFEG00010011982)	KLHL31 (ENSRFEG00010012687)	LRRC1 (ENSRFEG00010012721) ##22	MLIP (ENSRFEG00010012806)	TINAG (ENSRFEG00010013090)	FAM83B (ENSRFEG00010005425)	HCRTR2 (ENSRFEG00010005447)	GFRAL (ENSRFEG00010005474)	HMGCLL1 (ENSRFEG00010005544)	BMP5 (ENSRFEG00010005594)	ENSRFEG00010005630	ENSRFEG00010005654	ENSRFEG00010005704	DST (ENSRFEG00010006031)	BEND6 (ENSRFEG00010006418)	ENSRFEG00010006462	ZNF451 (ENSRFEG00010006493)	BAG2 (ENSRFEG00010006575)
Carnivora	ANCESTRAL SPECIES	4	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Felidae	ANCESTRAL SPECIES	5	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Panthera	ANCESTRAL SPECIES	7	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Panthera_a	ANCESTRAL SPECIES	4	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
lion	MODERN SPECIES	5	PAQR8 (ENSPLOG00000003284)	EFHC1 (ENSPLOG00000003384)	TRAM2 (ENSPLOG00000003508)	TMEM14A (ENSPLOG00000003538)	ENSPLOG00000003623	ENSPLOG00000003645	ENSPLOG00000003654	ENSPLOG00000003677	GSTA4 (ENSPLOG00000003698)	CILK1 (ENSPLOG00000003736)	FBXO9 (ENSPLOG00000003770)	GCM1 (ENSPLOG00000003807)	ELOVL5 (ENSPLOG00000003839)	GCLC (ENSPLOG00000003932)	KLHL31 (ENSPLOG00000004028)	LRRC1 (ENSPLOG00000004053) ##22	MLIP (ENSPLOG00000004128)	TINAG (ENSPLOG00000004202)	FAM83B (ENSPLOG00000004226)	HCRTR2 (ENSPLOG00000006068)	GFRAL (ENSPLOG00000006100)	HMGCLL1 (ENSPLOG00000006191)	BMP5 (ENSPLOG00000006334)	ENSPLOG00000006363	COL21A1 (ENSPLOG00000006412)	DST (ENSPLOG00000006730)	BEND6 (ENSPLOG00000007281)	KIAA1586 (ENSPLOG00000007341)	ZNF451 (ENSPLOG00000007397)	BAG2 (ENSPLOG00000007479)	RAB23 (ENSPLOG00000007511)
leopard	MODERN SPECIES	30	PAQR8 (ENSPPRG00000014367)	EFHC1 (ENSPPRG00000017929)	TRAM2 (ENSPPRG00000013374)	TMEM14A (ENSPPRG00000013164)	ENSPPRG00000012997	ENSPPRG00000012829	ENSPPRG00000012459	ENSPPRG00000010128	GSTA4 (ENSPPRG00000010076)	CILK1 (ENSPPRG00000009939)	FBXO9 (ENSPPRG00000009682)	GCM1 (ENSPPRG00000009556)	ELOVL5 (ENSPPRG00000008980)	GCLC (ENSPPRG00000008679)	KLHL31 (ENSPPRG00000008171)	LRRC1 (ENSPPRG00000007783) ##22	MLIP (ENSPPRG00000007158)	TINAG (ENSPPRG00000006218)	FAM83B (ENSPPRG00000005908)	ENSPPRG00000005391	HCRTR2 (ENSPPRG00000005364)	GFRAL (ENSPPRG00000005096)	HMGCLL1 (ENSPPRG00000004039)	BMP5 (ENSPPRG00000003471)	COL21A1 (ENSPPRG00000002942)	ENSPPRG00000000813	DST (ENSPPRG00000023161)	BEND6 (ENSPPRG00000014117)	KIAA1586 (ENSPPRG00000013765)	ZNF451 (ENSPPRG00000013264)	BAG2 (ENSPPRG00000012509)
Tiger	MODERN SPECIES	502	MCM3 (ENSPTIG00000014984)	PAQR8 (ENSPTIG00000006353)	EFHC1 (ENSPTIG00000020087)	TRAM2 (ENSPTIG00000011782)	TMEM14A (ENSPTIG00000012513)	ENSPTIG00000012893	ENSPTIG00000019425	ENSPTIG00000019692	GSTA4 (ENSPTIG00000001771)	CILK1 (ENSPTIG00000005233)	FBXO9 (ENSPTIG00000006392)	GCM1 (ENSPTIG00000008977)	ELOVL5 (ENSPTIG00000010022)	GCLC (ENSPTIG00000012154)	KLHL31 (ENSPTIG00000015573)	LRRC1 (ENSPTIG00000016682) ##22	MLIP (ENSPTIG00000018310)	TINAG (ENSPTIG00000000118)	FAM83B (ENSPTIG00000007339)	HCRTR2 (ENSPTIG00000008064)	GFRAL (ENSPTIG00000008929)	HMGCLL1 (ENSPTIG00000010174)	BMP5 (ENSPTIG00000013438)	COL21A1 (ENSPTIG00000014084)	DST (ENSPTIG00000020360)	BEND6 (ENSPTIG00000018733)	KIAA1586 (ENSPTIG00000020451)	ZNF451 (ENSPTIG00000021702)	BAG2 (ENSPTIG00000008952)	RAB23 (ENSPTIG00000009435)	PRIM2 (ENSPTIG00000010032)
Cat	MODERN SPECIES	236	PAQR8 (ENSFCAG00000031260)	EFHC1 (ENSFCAG00000011487)	TRAM2 (ENSFCAG00000002975)	TMEM14A (ENSFCAG00000025366)	ENSFCAG00000034807	ENSFCAG00000005236	ENSFCAG00000049404	ENSFCAG00000024966	GSTA4 (ENSFCAG00000036046)	CILK1 (ENSFCAG00000005238)	FBXO9 (ENSFCAG00000029612)	GCM1 (ENSFCAG00000035631)	ELOVL5 (ENSFCAG00000000586)	GCLC (ENSFCAG00000022171)	KLHL31 (ENSFCAG00000014353)	LRRC1 (ENSFCAG00000031982) ##22	MLIP (ENSFCAG00000025504)	TINAG (ENSFCAG00000009144)	FAM83B (ENSFCAG00000013437)	HCRTR2 (ENSFCAG00000023603)	GFRAL (ENSFCAG00000006786)	HMGCLL1 (ENSFCAG00000006787)	BMP5 (ENSFCAG00000004493)	COL21A1 (ENSFCAG00000029537)	DST (ENSFCAG00000028438)	BEND6 (ENSFCAG00000000962)	ZNF451 (ENSFCAG00000008723)	BAG2 (ENSFCAG00000043362)	PRIM2 (ENSFCAG00000029312)	ENSFCAG00000023328	ENSFCAG00000033315
Caniformia	ANCESTRAL SPECIES	3	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Ursidae	ANCESTRAL SPECIES	35	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Ursus	ANCESTRAL SPECIES	28	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h.y.b	ENSGT00940000154526.h.y.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C.ub.a	ENSGT00940000155008.C.vb	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Polar bear	MODERN SPECIES	174	PAQR8 (ENSUMAG00000004353)	EFHC1 (ENSUMAG00000004342)	TRAM2 (ENSUMAG00000004285)	TMEM14A (ENSUMAG00000004281)	ENSUMAG00000004280	ENSUMAG00000004271	ENSUMAG00000004238	ENSUMAG00000004224	GSTA4 (ENSUMAG00000004218)	CILK1 (ENSUMAG00000004198)	FBXO9 (ENSUMAG00000004188)	GCM1 (ENSUMAG00000004179)	ELOVL5 (ENSUMAG00000004173)	GCLC (ENSUMAG00000004165)	KLHL31 (ENSUMAG00000004157)	LRRC1 (ENSUMAG00000004120) ##22	ENSUMAG00000004109	TINAG (ENSUMAG00000004068)	FAM83B (ENSUMAG00000004057)	HCRTR2 (ENSUMAG00000004024)	GFRAL (ENSUMAG00000004008)	HMGCLL1 (ENSUMAG00000003997)	BMP5 (ENSUMAG00000003991)	ENSUMAG00000003966	ENSUMAG00000003958	DST (ENSUMAG00000002037)	ENSUMAG00000000661	ENSUMAG00000000252	BEND6 (ENSUMAG00000000237)	KIAA1586 (ENSUMAG00000000067)	ZNF451 (ENSUMAG00000018655)
American black bear	MODERN SPECIES	4492																LRRC1 (ENSUAMG00000003494) ##22
Giant Panda	MODERN SPECIES	10	IL17F (ENSAMEG00000025810)	MCM3 (ENSAMEG00000008540)	PAQR8 (ENSAMEG00000019263)	EFHC1 (ENSAMEG00000008516)	TRAM2 (ENSAMEG00000008465)	TMEM14A (ENSAMEG00000002373)	ENSAMEG00000002320	ENSAMEG00000005598	GSTA4 (ENSAMEG00000005658)	CILK1 (ENSAMEG00000005669)	FBXO9 (ENSAMEG00000005714)	GCM1 (ENSAMEG00000005755)	ELOVL5 (ENSAMEG00000005760)	GCLC (ENSAMEG00000005766)	KLHL31 (ENSAMEG00000005814)	LRRC1 (ENSAMEG00000005818) ##22	ENSAMEG00000029587	MLIP (ENSAMEG00000017417)	TINAG (ENSAMEG00000017426)	FAM83B (ENSAMEG00000017444)	HCRTR2 (ENSAMEG00000017446)	GFRAL (ENSAMEG00000017458)	HMGCLL1 (ENSAMEG00000028956)	BMP5 (ENSAMEG00000006523)	COL21A1 (ENSAMEG00000006555)	DST (ENSAMEG00000006586)	BEND6 (ENSAMEG00000006775)	KIAA1586 (ENSAMEG00000006783)	ZNF451 (ENSAMEG00000006790)	BAG2 (ENSAMEG00000026412)	ENSAMEG00000006825
Mustelinae	ANCESTRAL SPECIES	8	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778.d	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Ferret	MODERN SPECIES	328	ENSMPUG00000008998	MCM3 (ENSMPUG00000008986)	PAQR8 (ENSMPUG00000008975)	EFHC1 (ENSMPUG00000008966)	TRAM2 (ENSMPUG00000008954)	ENSMPUG00000008935	ENSMPUG00000008923	ENSMPUG00000008918	ENSMPUG00000008911	CILK1 (ENSMPUG00000008895)	FBXO9 (ENSMPUG00000008879)	GCM1 (ENSMPUG00000008870)	ELOVL5 (ENSMPUG00000008865)	GCLC (ENSMPUG00000008858)	KLHL31 (ENSMPUG00000008851)	LRRC1 (ENSMPUG00000008840) ##22	MLIP (ENSMPUG00000008821)	TINAG (ENSMPUG00000008814)
American mink	MODERN SPECIES	140	MPRB (ENSNVIG00000008871)	EFHC1 (ENSNVIG00000008855)	TRAM2 (ENSNVIG00000008831)	TMEM14A (ENSNVIG00000008776)	ENSNVIG00000008670	GSTA5 (ENSNVIG00000008633)	ENSNVIG00000008592	GSTA5 (ENSNVIG00000008573)	ENSNVIG00000008538	CILK1 (ENSNVIG00000008499)	FBXO9 (ENSNVIG00000008485)	GCM1 (ENSNVIG00000008468)	ELOVL5 (ENSNVIG00000008437)	GCLC (ENSNVIG00000008195)	KLHL31 (ENSNVIG00000008175)	LRRC1 (ENSNVIG00000008109) ##22	ENSNVIG00000008083	ENSNVIG00000008052	MLIP (ENSNVIG00000007997)	TINAG (ENSNVIG00000007925)	FAM83B (ENSNVIG00000007878)	ENSNVIG00000007852	HCRTR2 (ENSNVIG00000007829)	GFRAL (ENSNVIG00000007790)	HMGCLL1 (ENSNVIG00000007691)	BMP5 (ENSNVIG00000007651)	ENSNVIG00000007590	COL21A1 (ENSNVIG00000007392)	DST (ENSNVIG00000006845)	BEND6 (ENSNVIG00000006793)	ENSNVIG00000006773
Canidae	ANCESTRAL SPECIES	6	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778.a.a.a	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000153112.D.h.a.b.b.b	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000154708.nb.b	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Red fox	MODERN SPECIES	7	EFHC1 (ENSVVUG00000000034)	TRAM2 (ENSVVUG00000000039)	ENSVVUG00000000047	ENSVVUG00000000107	GSTA3 (ENSVVUG00000000776)	ENSVVUG00000000787	GSTA4 (ENSVVUG00000000802)	ICK (ENSVVUG00000000836)	FBXO9 (ENSVVUG00000000847)	GCM1 (ENSVVUG00000000853)	ELOVL5 (ENSVVUG00000000875)	ENSVVUG00000000903	ENSVVUG00000000947	GCLC (ENSVVUG00000000995)	KLHL31 (ENSVVUG00000001054)	LRRC1 (ENSVVUG00000001074) ##22	MLIP (ENSVVUG00000001097)	TINAG (ENSVVUG00000001136)	ENSVVUG00000001195	FAM83B (ENSVVUG00000001201)	HCRTR2 (ENSVVUG00000001234)	GFRAL (ENSVVUG00000001334)	HMGCLL1 (ENSVVUG00000001404)	ENSVVUG00000001435	BMP5 (ENSVVUG00000001439)	ENSVVUG00000001459	ENSVVUG00000001503	ENSVVUG00000001549	ENSVVUG00000001854	ENSVVUG00000006562	BEND6 (ENSVVUG00000008381)
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778.a.a.a	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000009040.f	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000153112.D.h.a.b.b.b	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000154708.nb.b.b	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590.i.a
Dog	MODERN SPECIES	3	ENSCAFG00845009512	ENSCAFG00845009595	ENSCAFG00845009638	ENSCAFG00845009716	GSTA4 (ENSCAFG00845009775)	CILK1 (ENSCAFG00845009901)	FBXO9 (ENSCAFG00845010007)	ENSCAFG00845010095	GCM1 (ENSCAFG00845010149)	ELOVL5 (ENSCAFG00845010176)	ENSCAFG00845010216	ENSCAFG00845010249	GCLC (ENSCAFG00845010300)	ENSCAFG00845010386	KLHL31 (ENSCAFG00845010535)	LRRC1 (ENSCAFG00845010591) ##22	MLIP (ENSCAFG00845010885)	TINAG (ENSCAFG00845011241)	ENSCAFG00845011394	FAM83B (ENSCAFG00845011413)	HCRTR2 (ENSCAFG00845011460)	GFRAL (ENSCAFG00845011491)	HMGCLL1 (ENSCAFG00845011660)	BMP5 (ENSCAFG00845011840)	COL21A1 (ENSCAFG00845011916)	ENSCAFG00845012078	DST (ENSCAFG00845012662)	BEND6 (ENSCAFG00845013601)	ZNF451 (ENSCAFG00845013682)	BAG2 (ENSCAFG00845013818)	RAB23 (ENSCAFG00845006719)
Dingo	MODERN SPECIES	276	TMEM14A (ENSCAFG00020013218)	ENSCAFG00020013223	ENSCAFG00020013267	ENSCAFG00020013286	ENSCAFG00020013287	ENSCAFG00020013292	CILK1 (ENSCAFG00020013302)	FBXO9 (ENSCAFG00020013321)	ENSCAFG00020013324	GCM1 (ENSCAFG00020013333)	ELOVL5 (ENSCAFG00020013335)	ENSCAFG00020013338	GCLC (ENSCAFG00020013347)	ENSCAFG00020013351	KLHL31 (ENSCAFG00020013352)	LRRC1 (ENSCAFG00020013353) ##22	MLIP (ENSCAFG00020013364)	TINAG (ENSCAFG00020013396)	FAM83B (ENSCAFG00020013411)	HCRTR2 (ENSCAFG00020013415)	GFRAL (ENSCAFG00020013425)	HMGCLL1 (ENSCAFG00020013433)	ENSCAFG00020013436	ENSCAFG00020013447	ENSCAFG00020013449	DST (ENSCAFG00020013702)	BEND6 (ENSCAFG00020015862)	ENSCAFG00020015866	ENSCAFG00020015868	KIAA1586 (ENSCAFG00020015871)	ZNF451 (ENSCAFG00020015879)
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206.p	ENSGT00940000166012	ENSGT00940000158206.o.a	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Suina	ANCESTRAL SPECIES	17	ENSGT00390000010512.k	ENSGT00390000007075	ENSGT00940000161798	ENSGT00390000012691.c.b	ENSGT00390000008815	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000161022	ENSGT00940000160668	ENSGT00940000160076	ENSGT00940000159208.B	ENSGT00940000159762	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Pig	MODERN SPECIES	15	WDR46 (ENSSSCG00000001504)	B3GALT4 (ENSSSCG00000001503)	RPS18 (ENSSSCG00000001502)	VPS52 (ENSSSCG00000001501)	COL21A1 (ENSSSCG00000001500)	DST (ENSSSCG00000001499)	BEND6 (ENSSSCG00000001498)	ZNF451 (ENSSSCG00000001497)	BAG2 (ENSSSCG00000033526)	RAB23 (ENSSSCG00000029539)	PRIM2 (ENSSSCG00000001493)	ENSSSCG00000062933	KHDRBS2 (ENSSSCG00000001490)	GCLC (ENSSSCG00000001488)	KLHL31 (ENSSSCG00000001487)	LRRC1 (ENSSSCG00000001486) ##22	MLIP (ENSSSCG00000001485)	TINAG (ENSSSCG00000001484)	FAM83B (ENSSSCG00000001483)	HCRTR2 (ENSSSCG00000001481)	GFRAL (ENSSSCG00000001480)	HMGCLL1 (ENSSSCG00000001479)	BMP5 (ENSSSCG00000001478)	RING1 (ENSSSCG00000001477)	HSD17B8 (ENSSSCG00000001476)	SLC39A7 (ENSSSCG00000001475)	RXRB (ENSSSCG00000001474)	COL11A2 (ENSSSCG00000001473)	SLA-DOA (ENSSSCG00000001472)	BRD2 (ENSSSCG00000001471)	SLA-DMA (ENSSSCG00000001470)
Chacoan peccary	MODERN SPECIES	782	ENSCWAG00000006503	WDR46 (ENSCWAG00000006519)	B3GALT4 (ENSCWAG00000006580)	ENSCWAG00000006594	VPS52 (ENSCWAG00000006627)	COL21A1 (ENSCWAG00000006695)	DST (ENSCWAG00000007332)	BEND6 (ENSCWAG00000010920)	ZNF451 (ENSCWAG00000010999)	BAG2 (ENSCWAG00000011125)	RAB23 (ENSCWAG00000011155)	PRIM2 (ENSCWAG00000011218)	KHDRBS2 (ENSCWAG00000011294)	GCLC (ENSCWAG00000011415)	KLHL31 (ENSCWAG00000011695)	LRRC1 (ENSCWAG00000011723) ##22	MLIP (ENSCWAG00000011825)	TINAG (ENSCWAG00000012390)	FAM83B (ENSCWAG00000012542)	HCRTR2 (ENSCWAG00000012598)	GFRAL (ENSCWAG00000012676)	HMGCLL1 (ENSCWAG00000012792)	BMP5 (ENSCWAG00000013472)	RING1 (ENSCWAG00000013538)	HSD17B8 (ENSCWAG00000013599)	SLC39A7 (ENSCWAG00000013691)	COL11A2 (ENSCWAG00000013860)	HLA-DOA (ENSCWAG00000015899)	BRD2 (ENSCWAG00000015939)	HLA-DMA (ENSCWAG00000016104)	HLA-DMB (ENSCWAG00000016177)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206.p	ENSGT00940000166012	ENSGT00940000158206.o.a	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Camelidae	ANCESTRAL SPECIES	13	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206.p	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Arabian camel	MODERN SPECIES	12	ENSCDRG00005011086	PAQR8 (ENSCDRG00005011116)	EFHC1 (ENSCDRG00005011151)	TRAM2 (ENSCDRG00005011552)	ENSCDRG00005011642	ENSCDRG00005011698	ENSCDRG00005011762	ENSCDRG00005012038	GSTA4 (ENSCDRG00005012092)	CILK1 (ENSCDRG00005012148)	FBXO9 (ENSCDRG00005012262)	GCM1 (ENSCDRG00005012750)	ELOVL5 (ENSCDRG00005012827)	GCLC (ENSCDRG00005012966)	KLHL31 (ENSCDRG00005013321)	LRRC1 (ENSCDRG00005013360) ##22	MLIP (ENSCDRG00005013584)	TINAG (ENSCDRG00005014270)	FAM83B (ENSCDRG00005014362)	HCRTR2 (ENSCDRG00005014448)	GFRAL (ENSCDRG00005014483)	HMGCLL1 (ENSCDRG00005014643)	BMP5 (ENSCDRG00005014824)	COL21A1 (ENSCDRG00005014887)	DST (ENSCDRG00005015294)	BEND6 (ENSCDRG00005017892)	ZNF451 (ENSCDRG00005017995)	BAG2 (ENSCDRG00005018601)	RAB23 (ENSCDRG00005018621)	PRIM2 (ENSCDRG00005018644)	KHDRBS2 (ENSCDRG00005018692)
Alpaca	MODERN SPECIES	641																ENSVPAG00000002389 ##22
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b	ENSGT00940000161821.c.b	ENSGT00940000155371.m.a.b.b	ENSGT00940000154993	ENSGT00940000155371.m.a.a	ENSGT00940000161821.d	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b	ENSGT00940000161821.c.b	ENSGT00940000155371.m.a.a	ENSGT00940000154993	ENSGT00940000155371.m.a.b.b	ENSGT00940000155371.m.a.b.a	ENSGT00940000161821.d	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Yarkand deer	MODERN SPECIES	30	COL11A2 (ENSCHYG00000004624)	HLA-DOA (ENSCHYG00000004561)	BRD2 (ENSCHYG00000004539)	HLA-DMA (ENSCHYG00000004520)	HLA-DMB (ENSCHYG00000004514)	ENSCHYG00000004500	TAP1 (ENSCHYG00000004483)	PSMB8 (ENSCHYG00000004467)	TAP2 (ENSCHYG00000004426)	HLA-DOB (ENSCHYG00000004391)	ENSCHYG00000004368	ENSCHYG00000004358	ENSCHYG00000004336	GCLC (ENSCHYG00000004293)	KLHL31 (ENSCHYG00000004258)	LRRC1 (ENSCHYG00000004239) ##22	TINAG (ENSCHYG00000004199)	MLIP (ENSCHYG00000004113)	FAM83B (ENSCHYG00000004082)	HCRTR2 (ENSCHYG00000004073)	GFRAL (ENSCHYG00000004059)	ENSCHYG00000003978	BMP5 (ENSCHYG00000003939)	COL21A1 (ENSCHYG00000003914)	DST (ENSCHYG00000001758)	BEND6 (ENSCHYG00000001266)	ENSCHYG00000001253	ZNF451 (ENSCHYG00000000980)	BAG2 (ENSCHYG00000000936)	RAB23 (ENSCHYG00000000927)	ENSCHYG00000000915
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000159762	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Siberian musk deer	MODERN SPECIES	355	RXRB (ENSMMSG00000023046)	COL11A2 (ENSMMSG00000022475)	HLA-DOA (ENSMMSG00000022389)	BRD2 (ENSMMSG00000022334)	HLA-DMA (ENSMMSG00000022283)	HLA-DMB (ENSMMSG00000022257)	PSMB9 (ENSMMSG00000022236)	PSMB8 (ENSMMSG00000022217)	TAP1 (ENSMMSG00000022156)	HLA-DOB (ENSMMSG00000022133)	ENSMMSG00000022107	ENSMMSG00000022087	ENSMMSG00000021536	GCLC (ENSMMSG00000021373)	KLHL31 (ENSMMSG00000021339)	LRRC1 (ENSMMSG00000021202) ##22	MLIP (ENSMMSG00000021042)	TINAG (ENSMMSG00000020918)	FAM83B (ENSMMSG00000020897)	HCRTR2 (ENSMMSG00000020859)	GFRAL (ENSMMSG00000020802)	HMGCLL1 (ENSMMSG00000020410)	BMP5 (ENSMMSG00000020359)	COL21A1 (ENSMMSG00000020241)	DST (ENSMMSG00000018172)	BEND6 (ENSMMSG00000017806)	ZNF451 (ENSMMSG00000017377)	BAG2 (ENSMMSG00000017336)	RAB23 (ENSMMSG00000017318)	PRIM2 (ENSMMSG00000017277)	ENSMMSG00000017252
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000159762	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000159762	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000158302.d.a	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590
Rambouillet Sheep	MODERN SPECIES	12	HLA-DMB (ENSOARG00020025272)	ENSOARG00020025249	TAP1 (ENSOARG00020025187)	PSMB8 (ENSOARG00020025156)	TAP2 (ENSOARG00020025129)	HLA-DOB (ENSOARG00020025120)	ENSOARG00020025111	ENSOARG00020025100	DYA (ENSOARG00020025089)	ENSOARG00020025077	ENSOARG00020025038	ENSOARG00020025022	ENSOARG00020025012	GCLC (ENSOARG00020024970)	KLHL31 (ENSOARG00020024949)	LRRC1 (ENSOARG00020024930) ##22	TINAG (ENSOARG00020024710)	ENSOARG00020024682	ENSOARG00020024669	FAM83B (ENSOARG00020024658)	ENSOARG00020024642	ENSOARG00020024636	ENSOARG00020024621	HCRTR2 (ENSOARG00020024594)	GFRAL (ENSOARG00020024545)	HMGCLL1 (ENSOARG00020024336)	BMP5 (ENSOARG00020024302)	COL21A1 (ENSOARG00020024249)	DST (ENSOARG00020021625)	ENSOARG00020021402	BEND6 (ENSOARG00020021318)
Goat	MODERN SPECIES	15	HLA-DOA (ENSCHIG00000014302)	BRD2 (ENSCHIG00000013946)	HLA-DMA (ENSCHIG00000009464)	HLA-DMB (ENSCHIG00000026519)	PSMB9 (ENSCHIG00000021513)	TAP1 (ENSCHIG00000021983)	PSMB8 (ENSCHIG00000012829)	TAP2 (ENSCHIG00000017732)	ENSCHIG00000019853	HLA-DOB (ENSCHIG00000010527)	ENSCHIG00000013102	ENSCHIG00000022158	ENSCHIG00000009662	GCLC (ENSCHIG00000013397)	KLHL31 (ENSCHIG00000003573)	LRRC1 (ENSCHIG00000021002) ##22	ENSCHIG00000020109	TINAG (ENSCHIG00000010892)	FAM83B (ENSCHIG00000019707)	HCRTR2 (ENSCHIG00000000459)	GFRAL (ENSCHIG00000008200)	HMGCLL1 (ENSCHIG00000017734)	BMP5 (ENSCHIG00000010429)	ENSCHIG00000023311	ENSCHIG00000016502	DST (ENSCHIG00000025774)	ENSCHIG00000012058	BEND6 (ENSCHIG00000016519)	ENSCHIG00000015604	ZNF451 (ENSCHIG00000017115)	BAG2 (ENSCHIG00000016736)
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb.d	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
American bison	MODERN SPECIES	3186	HLA-DOA (ENSBBBG00000015112)	BRD2 (ENSBBBG00000002785)	HLA-DMA (ENSBBBG00000015169)	HLA-DMB (ENSBBBG00000008914)	ENSBBBG00000015200	PSMB9 (ENSBBBG00000003777)	TAP1 (ENSBBBG00000015234)	PSMB8 (ENSBBBG00000015244)	TAP2 (ENSBBBG00000015257)	HLA-DOB (ENSBBBG00000015275)	ENSBBBG00000015280	ENSBBBG00000015297	ENSBBBG00000015836	GCLC (ENSBBBG00000015998)	KLHL31 (ENSBBBG00000002569)	LRRC1 (ENSBBBG00000016027) ##22	MLIP (ENSBBBG00000016140)	TINAG (ENSBBBG00000016191)	FAM83B (ENSBBBG00000016205)	HCRTR2 (ENSBBBG00000009059)	GFRAL (ENSBBBG00000016261)	HMGCLL1 (ENSBBBG00000016300)	BMP5 (ENSBBBG00000016316)	COL21A1 (ENSBBBG00000016434)	DST (ENSBBBG00000016742)	BEND6 (ENSBBBG00000016782)	ZNF451 (ENSBBBG00000016823)	ENSBBBG00000016830	RAB23 (ENSBBBG00000016845)	ENSBBBG00000007998	PRIM2 (ENSBBBG00000004175)
Bos	ANCESTRAL SPECIES	17	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb.d	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb.d	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT01010000223369	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Cow	MODERN SPECIES	15	BOLA-DOA (ENSBTAG00000006490)	BRD2 (ENSBTAG00000011074)	BOLA-DMA (ENSBTAG00000015730)	BOLA-DMB (ENSBTAG00000012451)	H2B (ENSBTAG00000051545)	PSMB9 (ENSBTAG00000008954)	TAP1 (ENSBTAG00000008953)	PSMB8 (ENSBTAG00000003039)	TAP2 (ENSBTAG00000003038)	BOLA-DOB (ENSBTAG00000047707)	BOLA-DYB (ENSBTAG00000045923)	BOLA-DYA (ENSBTAG00000002581)	DSB (ENSBTAG00000050757)	GCLC (ENSBTAG00000015571)	KLHL31 (ENSBTAG00000018167)	LRRC1 (ENSBTAG00000017533) ##22	MLIP (ENSBTAG00000014581)	TINAG (ENSBTAG00000012652)	FAM83B (ENSBTAG00000016058)	HCRTR2 (ENSBTAG00000011719)	GFRAL (ENSBTAG00000012973)	HMGCLL1 (ENSBTAG00000025718)	BMP5 (ENSBTAG00000012870)	ENSBTAG00000046193	ENSBTAG00000033515	ENSBTAG00000021237	ENSBTAG00000051082	BEND6 (ENSBTAG00000008228)	ZNF451 (ENSBTAG00000018879)	BAG2 (ENSBTAG00000005355)	RAB23 (ENSBTAG00000005362)
Hybrid Bos Indicus	MODERN SPECIES	15	HLA-DOA (ENSBIXG00005014640)	BRD2 (ENSBIXG00005014704)	HLA-DMA (ENSBIXG00005014743)	HLA-DMB (ENSBIXG00005014762)	ENSBIXG00005014770	PSMB9 (ENSBIXG00005014787)	TAP1 (ENSBIXG00005014801)	PSMB8 (ENSBIXG00005014824)	TAP2 (ENSBIXG00005014872)	HLA-DOB (ENSBIXG00005014905)	ENSBIXG00005007128	ENSBIXG00005014931	ENSBIXG00005014945	GCLC (ENSBIXG00005015026)	KLHL31 (ENSBIXG00005007502)	LRRC1 (ENSBIXG00005002222) ##22	ENSBIXG00005015134	MLIP (ENSBIXG00005015301)	TINAG (ENSBIXG00005015398)	FAM83B (ENSBIXG00005015427)	HCRTR2 (ENSBIXG00005002278)	GFRAL (ENSBIXG00005006745)	HMGCLL1 (ENSBIXG00005015587)	BMP5 (ENSBIXG00005015628)	COL21A1 (ENSBIXG00005002435)	DST (ENSBIXG00005015867)	ENSBIXG00005002508	BEND6 (ENSBIXG00005015948)	ZNF451 (ENSBIXG00005006347)	BAG2 (ENSBIXG00005016068)	RAB23 (ENSBIXG00005016081)
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.nb.d	ENSGT00940000161821.d.f	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Wild yak	MODERN SPECIES	401	HLA-DOA (ENSBMUG00000008090)	BRD2 (ENSBMUG00000008066)	HLA-DMA (ENSBMUG00000008047)	HLA-DMB (ENSBMUG00000008003)	ENSBMUG00000007993	PSMB9 (ENSBMUG00000007982)	TAP1 (ENSBMUG00000007967)	PSMB8 (ENSBMUG00000007942)	TAP2 (ENSBMUG00000007931)	HLA-DOB (ENSBMUG00000007908)	ENSBMUG00000007890	ENSBMUG00000007873	ENSBMUG00000006036	GCLC (ENSBMUG00000005430)	KLHL31 (ENSBMUG00000005354)	LRRC1 (ENSBMUG00000005342) ##22
Domestic yak	MODERN SPECIES	16	HLA-DOA (ENSBGRG00000021588)	BRD2 (ENSBGRG00000021629)	HLA-DMA (ENSBGRG00000021851)	HLA-DMB (ENSBGRG00000021922)	ENSBGRG00000021991	TAP1 (ENSBGRG00000022060)	PSMB8 (ENSBGRG00000022108)	TAP2 (ENSBGRG00000022189)	HLA-DOB (ENSBGRG00000022347)	ENSBGRG00000022408	ENSBGRG00000022452	ENSBGRG00000022508	ENSBGRG00000022571	GCLC (ENSBGRG00000022619)	KLHL31 (ENSBGRG00000023447)	LRRC1 (ENSBGRG00000023507) ##22	MLIP (ENSBGRG00000023693)	ENSBGRG00000024111	TINAG (ENSBGRG00000024130)	FAM83B (ENSBGRG00000024257)	HCRTR2 (ENSBGRG00000024278)	GFRAL (ENSBGRG00000024326)	HMGCLL1 (ENSBGRG00000024393)	BMP5 (ENSBGRG00000024536)	COL21A1 (ENSBGRG00000024606)	DST (ENSBGRG00000024977)	BEND6 (ENSBGRG00000025329)	ZNF451 (ENSBGRG00000025361)	BAG2 (ENSBGRG00000025532)	RAB23 (ENSBGRG00000025541)	ENSBGRG00000025544
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000159208.B	ENSGT00940000159762	ENSGT00940000162390	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Blue whale	MODERN SPECIES	2	RXRB (ENSBMSG00010010818)	COL11A2 (ENSBMSG00010010982)	ENSBMSG00010011366	HLA-DOA (ENSBMSG00010011380)	BRD2 (ENSBMSG00010011399)	HLA-DMA (ENSBMSG00010011432)	HLA-DMB (ENSBMSG00010011446)	PSMB9 (ENSBMSG00010011462)	TAP1 (ENSBMSG00010011477)	PSMB8 (ENSBMSG00010011493)	TAP2 (ENSBMSG00010011505)	HLA-DOB (ENSBMSG00010011526)	ENSBMSG00010011564	GCLC (ENSBMSG00010011645)	KLHL31 (ENSBMSG00010011739)	LRRC1 (ENSBMSG00010011758) ##22	MLIP (ENSBMSG00010011840)	TINAG (ENSBMSG00010011903)	FAM83B (ENSBMSG00010011937)	HCRTR2 (ENSBMSG00010011945)	GFRAL (ENSBMSG00010011956)	HMGCLL1 (ENSBMSG00010011994)	BMP5 (ENSBMSG00010012051)	ENSBMSG00010012065	ENSBMSG00010012074	ENSBMSG00010012133	ENSBMSG00010012239	ENSBMSG00010012271	BEND6 (ENSBMSG00010012288)	KIAA1586 (ENSBMSG00010012295)	ZNF451 (ENSBMSG00010012315)
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000159208.B	ENSGT00940000159762	ENSGT00940000162390	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790.i
Sperm whale	MODERN SPECIES	9	HSD17B8 (ENSPCTG00005011876)	SLC39A7 (ENSPCTG00005011775)	RXRB (ENSPCTG00005011572)	COL11A2 (ENSPCTG00005009478)	HLA-DOA (ENSPCTG00005009319)	ENSPCTG00005009114	HLA-DMB (ENSPCTG00005009080)	PSMB9 (ENSPCTG00005008969)	TAP1 (ENSPCTG00005021480)	PSMB8 (ENSPCTG00005021456)	TAP2 (ENSPCTG00005021415)	HLA-DOB (ENSPCTG00005021383)	ENSPCTG00005021294	GCLC (ENSPCTG00005021190)	KLHL31 (ENSPCTG00005021169)	LRRC1 (ENSPCTG00005021134) ##22	MLIP (ENSPCTG00005020921)	TINAG (ENSPCTG00005020766)	FAM83B (ENSPCTG00005020744)	HCRTR2 (ENSPCTG00005020624)	GFRAL (ENSPCTG00005020543)	HMGCLL1 (ENSPCTG00005020290)	BMP5 (ENSPCTG00005020211)	COL21A1 (ENSPCTG00005020038)	DST (ENSPCTG00005015073)	BEND6 (ENSPCTG00005014566)	KIAA1586 (ENSPCTG00005014495)	ZNF451 (ENSPCTG00005014342)	BAG2 (ENSPCTG00005014289)	RAB23 (ENSPCTG00005014238)	ENSPCTG00005014161
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000159208.B	ENSGT00940000159762	ENSGT00940000162390	ENSGT00940000162112	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Dolphin	MODERN SPECIES	2739														GCLC (ENSTTRG00000000740)	KLHL31 (ENSTTRG00000000741)	LRRC1 (ENSTTRG00000000742) ##22	ENSTTRG00000000743	TINAG (ENSTTRG00000000744)	FAM83B (ENSTTRG00000000745)	HCRTR2 (ENSTTRG00000000746)
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000159762	ENSGT00940000162390	ENSGT00940000162112	ENSGT00940000154732.q.b.a	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790.i
Vaquita	MODERN SPECIES	2	COL11A2 (ENSPSNG00000019010)	ENSPSNG00000018732	HLA-DOA (ENSPSNG00000018672)	ENSPSNG00000018620	BRD2 (ENSPSNG00000018549)	HLA-DMA (ENSPSNG00000018364)	HLA-DMB (ENSPSNG00000018284)	PSMB9 (ENSPSNG00000018232)	TAP1 (ENSPSNG00000018201)	PSMB8 (ENSPSNG00000018160)	TAP2 (ENSPSNG00000018051)	HLA-DOB (ENSPSNG00000017969)	ENSPSNG00000017762	GCLC (ENSPSNG00000017555)	KLHL31 (ENSPSNG00000017492)	ENSPSNG00000017462 ##22	MLIP (ENSPSNG00000017046)	TINAG (ENSPSNG00000016830)	FAM83B (ENSPSNG00000016755)	HCRTR2 (ENSPSNG00000016655)	GFRAL (ENSPSNG00000016509)	HMGCLL1 (ENSPSNG00000016099)	BMP5 (ENSPSNG00000015931)	ENSPSNG00000015738	DST (ENSPSNG00000015242)	BEND6 (ENSPSNG00000014810)	KIAA1586 (ENSPSNG00000014757)	ZNF451 (ENSPSNG00000014027)	BAG2 (ENSPSNG00000013853)	RAB23 (ENSPSNG00000013810)	ENSPSNG00000013702
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000159762	ENSGT00940000162390	ENSGT00940000162112	ENSGT00940000154732.q.b.a	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000155371.m.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790.i	ENSGT00940000157134
Narwhal	MODERN SPECIES	310	COL11A2 (ENSMMNG00015012846)	ENSMMNG00015013117	HLA-DOA (ENSMMNG00015013123)	ENSMMNG00015013152	BRD2 (ENSMMNG00015013179)	HLA-DMA (ENSMMNG00015013256)	HLA-DMB (ENSMMNG00015013276)	PSMB9 (ENSMMNG00015013288)	TAP1 (ENSMMNG00015013311)	PSMB8 (ENSMMNG00015013325)	TAP2 (ENSMMNG00015013343)	HLA-DOB (ENSMMNG00015013519)	ENSMMNG00015013533	GCLC (ENSMMNG00015013551)	KLHL31 (ENSMMNG00015013579)	LRRC1 (ENSMMNG00015013594) ##22	MLIP (ENSMMNG00015013648)	ENSMMNG00015013701	TINAG (ENSMMNG00015013728)	FAM83B (ENSMMNG00015013752)	HCRTR2 (ENSMMNG00015013768)	GFRAL (ENSMMNG00015013778)	HMGCLL1 (ENSMMNG00015013822)	BMP5 (ENSMMNG00015013873)	COL21A1 (ENSMMNG00015013907)	DST (ENSMMNG00015014103)	BEND6 (ENSMMNG00015014310)	ZNF451 (ENSMMNG00015014352)	BAG2 (ENSMMNG00015014378)	RAB23 (ENSMMNG00015014394)	PRIM2 (ENSMMNG00015014404)
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	8	SLC39A7 (ENSDLEG00000008789)	RXRB (ENSDLEG00000008760)	COL11A2 (ENSDLEG00000008562)	HLA-DOA (ENSDLEG00000008482)	ENSDLEG00000008322	BRD2 (ENSDLEG00000008248)	HLA-DMA (ENSDLEG00000008210)	HLA-DMB (ENSDLEG00000008166)	PSMB9 (ENSDLEG00000008143)	TAP1 (ENSDLEG00000021996)	PSMB8 (ENSDLEG00000021995)	TAP2 (ENSDLEG00000021994)	ENSDLEG00000021992	GCLC (ENSDLEG00000021991)	KLHL31 (ENSDLEG00000021990)	ENSDLEG00000021989 ##22	LRRC1 (ENSDLEG00000021988) ##22	MLIP (ENSDLEG00000021987)	ENSDLEG00000021986	TINAG (ENSDLEG00000021985)	FAM83B (ENSDLEG00000021984)	HCRTR2 (ENSDLEG00000021982)	GFRAL (ENSDLEG00000021981)	HMGCLL1 (ENSDLEG00000021980)	BMP5 (ENSDLEG00000021979)	ENSDLEG00000021977	DST (ENSDLEG00000021102)	BEND6 (ENSDLEG00000019960)	ZNF451 (ENSDLEG00000019947)	BAG2 (ENSDLEG00000019943)	RAB23 (ENSDLEG00000019941)
Beluga whale	MODERN SPECIES	8	PRIM2 (ENSDLEG00000019930)	RAB23 (ENSDLEG00000019941)	BAG2 (ENSDLEG00000019943)	ZNF451 (ENSDLEG00000019947)	BEND6 (ENSDLEG00000019960)	DST (ENSDLEG00000021102)	ENSDLEG00000021977	BMP5 (ENSDLEG00000021979)	HMGCLL1 (ENSDLEG00000021980)	GFRAL (ENSDLEG00000021981)	HCRTR2 (ENSDLEG00000021982)	FAM83B (ENSDLEG00000021984)	TINAG (ENSDLEG00000021985)	ENSDLEG00000021986	MLIP (ENSDLEG00000021987)	LRRC1 (ENSDLEG00000021988) ##22	ENSDLEG00000021989 ##22	KLHL31 (ENSDLEG00000021990)	GCLC (ENSDLEG00000021991)	ENSDLEG00000021992	TAP2 (ENSDLEG00000021994)	PSMB8 (ENSDLEG00000021995)	TAP1 (ENSDLEG00000021996)	PSMB9 (ENSDLEG00000008143)	HLA-DMB (ENSDLEG00000008166)	HLA-DMA (ENSDLEG00000008210)	BRD2 (ENSDLEG00000008248)	ENSDLEG00000008322	HLA-DOA (ENSDLEG00000008482)	COL11A2 (ENSDLEG00000008562)	RXRB (ENSDLEG00000008760)
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Tree shrew	MODERN SPECIES	5436																LRRC1 (ENSTBEG00000001839) ##22	ENSTBEG00000002940
Glires	ANCESTRAL SPECIES	5	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h.i.b	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Rabbit	MODERN SPECIES	3	TRAM2 (ENSOCUG00000012094)	ENSOCUG00000012895	ENSOCUG00000038012	ENSOCUG00000012902	GSTA5 (ENSOCUG00000029486)	ENSOCUG00000034994	GSTA4 (ENSOCUG00000003680)	CILK1 (ENSOCUG00000027465)	FBXO9 (ENSOCUG00000011388)	GCM1 (ENSOCUG00000009246)	ELOVL5 (ENSOCUG00000011469)	GCLC (ENSOCUG00000012805)	KLHL31 (ENSOCUG00000011879)	ENSOCUG00000021906	ENSOCUG00000038196	LRRC1 (ENSOCUG00000002730) ##22	ENSOCUG00000038098	MLIP (ENSOCUG00000010453)	ENSOCUG00000034228	TINAG (ENSOCUG00000015803)	FAM83B (ENSOCUG00000003822)	HCRTR2 (ENSOCUG00000007768)	GFRAL (ENSOCUG00000016654)	HMGCLL1 (ENSOCUG00000029661)	BMP5 (ENSOCUG00000025226)	COL21A1 (ENSOCUG00000012337)	DST (ENSOCUG00000014074)	ENSOCUG00000039663	BEND6 (ENSOCUG00000007262)	ENSOCUG00000026808	ZNF451 (ENSOCUG00000004809)
Pika	MODERN SPECIES	1473																LRRC1 (ENSOPRG00000012433) ##22
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Kangaroo rat	MODERN SPECIES	363	Il17a (ENSDORG00000008932)	Il17f (ENSDORG00000006136)	Mcm3 (ENSDORG00000006138)	Efhc1 (ENSDORG00000006864)	Tram2 (ENSDORG00000006868)	ENSDORG00000012421	ENSDORG00000014473	ENSDORG00000029294	Gsta4 (ENSDORG00000029976)	Cilk1 (ENSDORG00000003623)	Fbxo9 (ENSDORG00000003625)	Gcm1 (ENSDORG00000003627)	Elovl5 (ENSDORG00000014395)	Gclc (ENSDORG00000026700)	Klhl31 (ENSDORG00000027643)	Lrrc1 (ENSDORG00000010229) ##22	ENSDORG00000011594	Tinag (ENSDORG00000011595)	Hcrtr2 (ENSDORG00000007538)	Hmgcll1 (ENSDORG00000027715)	Bmp5 (ENSDORG00000008266)	Dst (ENSDORG00000006178)	Bend6 (ENSDORG00000003766)	ENSDORG00000026787	ENSDORG00000028345	Bag2 (ENSDORG00000008361)	Rab23 (ENSDORG00000028344)	Prim2 (ENSDORG00000016048)	Khdrbs2 (ENSDORG00000005701)	Ptp4a1 (ENSDORG00000023187)	ENSDORG00000023417
Myomorpha	ANCESTRAL SPECIES	25	ENSGT00940000171801	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	151					ENSJJAG00000014725	Meis2 (ENSJJAG00000015618)	Cdin1 (ENSJJAG00000016982)	ENSJJAG00000017253	ENSJJAG00000017385	ENSJJAG00000017581	Dph6 (ENSJJAG00000017836)	Zfp770 (ENSJJAG00000017987)	Aqr (ENSJJAG00000018777)	Actc1 (ENSJJAG00000005500)	Gjd2 (ENSJJAG00000005566)	ENSJJAG00000007567 ##22	ENSJJAG00000007701	ENSJJAG00000008716	Tinag (ENSJJAG00000009957)	Fam83b (ENSJJAG00000010325)	Hcrtr2 (ENSJJAG00000010947)	Gfral (ENSJJAG00000017368)	ENSJJAG00000017592	Bmp5 (ENSJJAG00000018304)	ENSJJAG00000018917	Dst (ENSJJAG00000001952)	Bend6 (ENSJJAG00000015751)	Zfp451 (ENSJJAG00000017308)	Bag2 (ENSJJAG00000019549)	Rab23 (ENSJJAG00000020094)	Prim2 (ENSJJAG00000015897)
Lesser Egyptian jerboa	MODERN SPECIES	124	1810030O07Rik (ENSJJAG00000019402)	ENSJJAG00000019088	Bcor (ENSJJAG00000018755)	Mid1ip1 (ENSJJAG00000013196)	ENSJJAG00000018161	Tspan7 (ENSJJAG00000017974)	Otc (ENSJJAG00000017566)	Rpgr (ENSJJAG00000014640)	Srpx (ENSJJAG00000012346)	Sytl5 (ENSJJAG00000009155)	ENSJJAG00000003835	Dynlt3 (ENSJJAG00000000829)	Cybb (ENSJJAG00000000492)	Xk (ENSJJAG00000000183)	Lancl3 (ENSJJAG00000022937)	ENSJJAG00000009500 ##22
Muroidea	ANCESTRAL SPECIES	23	ENSGT00940000171801	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644
Upper Galilee mountains blind mole rat	MODERN SPECIES	430										ENSNGAG00000014988	Fbxo9 (ENSNGAG00000012086)	Gcm1 (ENSNGAG00000011430)	Elovl5 (ENSNGAG00000015332)	Gclc (ENSNGAG00000022182)	Klhl31 (ENSNGAG00000021204)	ENSNGAG00000015359 ##22	ENSNGAG00000020341	Tinag (ENSNGAG00000010538)
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00860000135208	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00860000135208	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00950000183029.B.c.a.r	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000154353.B	ENSGT00860000135208	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351.n	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a
Golden Hamster	MODERN SPECIES	658	Cd109 (ENSMAUG00000019038)	Slc17a5 (ENSMAUG00000017608)	Eef1a1 (ENSMAUG00000022005)	Mto1 (ENSMAUG00000021565)	ENSMAUG00000007390	Ddx43 (ENSMAUG00000001441)	Dppa5a (ENSMAUG00000021918)	ENSMAUG00000015526	Gsta4 (ENSMAUG00000009682)	Cilk1 (ENSMAUG00000001197)	Fbxo9 (ENSMAUG00000019094)	Gcm1 (ENSMAUG00000011356)	Elovl5 (ENSMAUG00000001277)	Gclc (ENSMAUG00000014564)	Klhl31 (ENSMAUG00000020848)	Lrrc1 (ENSMAUG00000008978) ##22	Mlip (ENSMAUG00000011161)	Tinag (ENSMAUG00000018690)	Fam83b (ENSMAUG00000021764)	Hcrtr2 (ENSMAUG00000008463)	Gfral (ENSMAUG00000008364)	Hmgcll1 (ENSMAUG00000022050)	Bmp5 (ENSMAUG00000018758)	Scg3 (ENSMAUG00000009353)	Lysmd2 (ENSMAUG00000006540)	Tmod2 (ENSMAUG00000010992)	Tmod3 (ENSMAUG00000016527)	Leo1 (ENSMAUG00000021013)	ENSMAUG00000002809	ENSMAUG00000007608	Gnb5 (ENSMAUG00000008570)
Chinese hamster chok1gshd	MODERN SPECIES	284	Cgas (ENSCGRG00001023109)	Ddx43 (ENSCGRG00001001145)	ENSCGRG00001011570	ENSCGRG00001012853	ENSCGRG00001015955	ENSCGRG00001004595	ENSCGRG00001024170	ENSCGRG00001003804	Gsta4 (ENSCGRG00001017948)	Cilk1 (ENSCGRG00001019252)	Fbxo9 (ENSCGRG00001024064)	Gcm1 (ENSCGRG00001024591)	ELOVL5 (ENSCGRG00001012477)	Gclc (ENSCGRG00001020917)	Klhl31 (ENSCGRG00001022670)	Lrrc1 (ENSCGRG00001007045) ##22	Mlip (ENSCGRG00001019082)	Tinag (ENSCGRG00001001754)	Fam83b (ENSCGRG00001020454)	ENSCGRG00001024004	Hcrtr2 (ENSCGRG00001024668)	Gfral (ENSCGRG00001004854)	ENSCGRG00001012775	Hmgcll1 (ENSCGRG00001014320)	Bmp5 (ENSCGRG00001018423)	Scg3 (ENSCGRG00001003651)	Lysmd2 (ENSCGRG00001007594)	Tmod2 (ENSCGRG00001012835)	Tmod3 (ENSCGRG00001015113)	Leo1 (ENSCGRG00001021688)	ENSCGRG00001019175
Cricetidae_B	ANCESTRAL SPECIES	24	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00860000135208	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a
Prairie vole	MODERN SPECIES	13	Ddx43 (ENSMOCG00000012956)	Dppa5a (ENSMOCG00000020488)	ENSMOCG00000021748	ENSMOCG00000022015	ENSMOCG00000011965	ENSMOCG00000002100	ENSMOCG00000005851	Gsta4 (ENSMOCG00000013784)	ENSMOCG00000012974	Cilk1 (ENSMOCG00000019502)	Fbxo9 (ENSMOCG00000014301)	Gcm1 (ENSMOCG00000018733)	Elovl5 (ENSMOCG00000017008)	Gclc (ENSMOCG00000020534)	Klhl31 (ENSMOCG00000006334)	Lrrc1 (ENSMOCG00000010295) ##22	Mlip (ENSMOCG00000014883)	Tinag (ENSMOCG00000004718)	Fam83b (ENSMOCG00000022341)	Hcrtr2 (ENSMOCG00000014320)	Gfral (ENSMOCG00000006944)	Hmgcll1 (ENSMOCG00000022504)	Bmp5 (ENSMOCG00000017571)	Scg3 (ENSMOCG00000018367)	Lysmd2 (ENSMOCG00000019308)	Tmod2 (ENSMOCG00000020810)	Tmod3 (ENSMOCG00000005868)	Leo1 (ENSMOCG00000012894)	Mapk6 (ENSMOCG00000003825)	ENSMOCG00000017284	Gnb5 (ENSMOCG00000002654)
Northern American deer mouse	MODERN SPECIES	20	Cep162 (ENSPEMG00000020569)	ENSPEMG00000001000	Tbx18 (ENSPEMG00000012060)	ENSPEMG00000014670	ENSPEMG00000020546	Nt5e (ENSPEMG00000001273)	Snx14 (ENSPEMG00000009462)	Syncrip (ENSPEMG00000021017)	ENSPEMG00000020301	Cilk1 (ENSPEMG00000009282)	Fbxo9 (ENSPEMG00000001194)	Gcm1 (ENSPEMG00000015197)	Elovl5 (ENSPEMG00000009014)	Gclc (ENSPEMG00000012093)	Klhl31 (ENSPEMG00000011706)	Lrrc1 (ENSPEMG00000015983) ##22	Mlip (ENSPEMG00000000629)	Tinag (ENSPEMG00000023733)	Fam83b (ENSPEMG00000024281)	Hcrtr2 (ENSPEMG00000018057)	Gfral (ENSPEMG00000007225)	Hmgcll1 (ENSPEMG00000012034)	Bmp5 (ENSPEMG00000002005)	Scg3 (ENSPEMG00000012610)	Lysmd2 (ENSPEMG00000028409)	Tmod2 (ENSPEMG00000030712)	Tmod3 (ENSPEMG00000015498)	Leo1 (ENSPEMG00000003747)	ENSPEMG00000026312	Gnb5 (ENSPEMG00000004103)	Myo5c (ENSPEMG00000010318)
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00860000135208	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000164610	ENSGT01090000260003.a.b.b.a.a.a.b.a
Mus	ANCESTRAL SPECIES	4	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B	ENSGT00940000154526.h.i.a	ENSGT00860000135208	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00900000143709	ENSGT00940000154351	ENSGT00940000164610
Mus_A	ANCESTRAL SPECIES	4	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B.j	ENSGT00940000154526.h.i.a	ENSGT00860000135208.b.a.a	ENSGT00860000135208.a	ENSGT00860000135208.b.a.b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00900000143709	ENSGT00940000154351	ENSGT00940000164610
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0032469	Cgas (MGP_CAROLIEiJ_G0032468)	Ddx43 (MGP_CAROLIEiJ_G0032467)	Ooep (MGP_CAROLIEiJ_G0032466)	Dppa5a (MGP_CAROLIEiJ_G0032465)	MGP_CAROLIEiJ_G0032464	Omt2b (MGP_CAROLIEiJ_G0032463)	Omt2a (MGP_CAROLIEiJ_G0032462)	Gsta4 (MGP_CAROLIEiJ_G0032461)	Cilk1 (MGP_CAROLIEiJ_G0032460)	Fbxo9 (MGP_CAROLIEiJ_G0032459)	Gcm1 (MGP_CAROLIEiJ_G0032458)	Elovl5 (MGP_CAROLIEiJ_G0032457)	Gclc (MGP_CAROLIEiJ_G0032456)	Klhl31 (MGP_CAROLIEiJ_G0032455)	Lrrc1 (MGP_CAROLIEiJ_G0032454) ##22	Mlip (MGP_CAROLIEiJ_G0032453)	Tinag (MGP_CAROLIEiJ_G0032452)	Fam83b (MGP_CAROLIEiJ_G0032451)	Hcrtr2 (MGP_CAROLIEiJ_G0032450)	Gfral (MGP_CAROLIEiJ_G0032449)	Hmgcll1 (MGP_CAROLIEiJ_G0032448)	Bmp5 (MGP_CAROLIEiJ_G0032447)	Scg3 (MGP_CAROLIEiJ_G0032446)	Lysmd2 (MGP_CAROLIEiJ_G0032445)	Tmod2 (MGP_CAROLIEiJ_G0032444)	Tmod3 (MGP_CAROLIEiJ_G0032443)	Leo1 (MGP_CAROLIEiJ_G0032442)	Mapk6 (MGP_CAROLIEiJ_G0032441)	Bcl2l10 (MGP_CAROLIEiJ_G0032440)	Gnb5 (MGP_CAROLIEiJ_G0032439)
Mus_B	ANCESTRAL SPECIES	3	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B.j	ENSGT00940000154526.h.i.a	ENSGT00860000135208.b.a.a	ENSGT00860000135208.a	ENSGT00860000135208.b.a.b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00900000143709	ENSGT00940000154351	ENSGT00940000164610
Mouse	MODERN SPECIES	18	Ooep (ENSMUSG00000032346)	Dppa5a (ENSMUSG00000060461)	Gsta2 (ENSMUSG00000057933)	Omt2b (ENSMUSG00000038750)	Omt2a (ENSMUSG00000066463)	Gsta5 (ENSMUSG00000074179)	Gm3776 (ENSMUSG00000111709)	Gsta1 (ENSMUSG00000074183)	Gsta4 (ENSMUSG00000032348)	Cilk1 (ENSMUSG00000009828)	Fbxo9 (ENSMUSG00000001366)	Gcm1 (ENSMUSG00000023333)	Elovl5 (ENSMUSG00000032349)	Gclc (ENSMUSG00000032350)	Klhl31 (ENSMUSG00000044938)	Lrrc1 (ENSMUSG00000032352) ##22	Mlip (ENSMUSG00000032355)	Tinag (ENSMUSG00000032357)	Fam83b (ENSMUSG00000032358)	Hcrtr2 (ENSMUSG00000032360)	Gfral (ENSMUSG00000059383)	Hmgcll1 (ENSMUSG00000007908)	Bmp5 (ENSMUSG00000032179)	Scg3 (ENSMUSG00000032181)	Lysmd2 (ENSMUSG00000032184)	Tmod2 (ENSMUSG00000032186)	Tmod3 (ENSMUSG00000058587)	Leo1 (ENSMUSG00000042487)	Mapk6 (ENSMUSG00000042688)	Bcl2l10 (ENSMUSG00000032191)	Gnb5 (ENSMUSG00000032192)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000160370	ENSGT00390000011297	ENSGT01100000263980	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000154353.B.j	ENSGT00860000135208.b.a.b	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000160631	ENSGT00940000158280	ENSGT00550000074952	ENSGT00900000143709	ENSGT00940000154351	ENSGT00940000164610
spretus	MODERN SPECIES	18	Cgas (MGP_SPRETEiJ_G0033608)	Ddx43 (MGP_SPRETEiJ_G0033607)	Ooep (MGP_SPRETEiJ_G0033606)	Dppa5a (MGP_SPRETEiJ_G0033605)	MGP_SPRETEiJ_G0033604	MGP_SPRETEiJ_G0033603	MGP_SPRETEiJ_G0033602	Omt2a (MGP_SPRETEiJ_G0033601)	Gsta4 (MGP_SPRETEiJ_G0033600)	Cilk1 (MGP_SPRETEiJ_G0033599)	Fbxo9 (MGP_SPRETEiJ_G0033598)	Gcm1 (MGP_SPRETEiJ_G0033597)	Elovl5 (MGP_SPRETEiJ_G0033596)	Gclc (MGP_SPRETEiJ_G0033595)	Klhl31 (MGP_SPRETEiJ_G0033594)	Lrrc1 (MGP_SPRETEiJ_G0033593) ##22	Mlip (MGP_SPRETEiJ_G0033592)	Tinag (MGP_SPRETEiJ_G0033591)	Fam83b (MGP_SPRETEiJ_G0033590)	Hcrtr2 (MGP_SPRETEiJ_G0033589)	Gfral (MGP_SPRETEiJ_G0033588)	Hmgcll1 (MGP_SPRETEiJ_G0033587)	Bmp5 (MGP_SPRETEiJ_G0033586)	Scg3 (MGP_SPRETEiJ_G0033585)	Lysmd2 (MGP_SPRETEiJ_G0033584)	Tmod2 (MGP_SPRETEiJ_G0033583)	Tmod3 (MGP_SPRETEiJ_G0033582)	Leo1 (MGP_SPRETEiJ_G0033581)	MGP_SPRETEiJ_G0033580	Mapk6 (MGP_SPRETEiJ_G0033579)	Bcl2l10 (MGP_SPRETEiJ_G0033578)
Steppe mouse	MODERN SPECIES	2835															Klhl31 (ENSMSIG00000027948)	Lrrc1 (ENSMSIG00000027769) ##22	Mlip (ENSMSIG00000027330)	ENSMSIG00000027315	Tinag (ENSMSIG00000027306)
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0015335	Cgas (MGP_PahariEiJ_G0015334)	Ddx43 (MGP_PahariEiJ_G0015333)	Ooep (MGP_PahariEiJ_G0015332)	MGP_PahariEiJ_G0015331	MGP_PahariEiJ_G0015330	MGP_PahariEiJ_G0015329	MGP_PahariEiJ_G0015328	Gsta4 (MGP_PahariEiJ_G0015326)	Cilk1 (MGP_PahariEiJ_G0015325)	Fbxo9 (MGP_PahariEiJ_G0015324)	Gcm1 (MGP_PahariEiJ_G0015323)	Elovl5 (MGP_PahariEiJ_G0015322)	MGP_PahariEiJ_G0015321	Klhl31 (MGP_PahariEiJ_G0015320)	Lrrc1 (MGP_PahariEiJ_G0015319) ##22	Mlip (MGP_PahariEiJ_G0015318)	Tinag (MGP_PahariEiJ_G0015317)	Fam83b (MGP_PahariEiJ_G0015316)	Hcrtr2 (MGP_PahariEiJ_G0015315)	Gfral (MGP_PahariEiJ_G0015314)	Hmgcll1 (MGP_PahariEiJ_G0015313)	Bmp5 (MGP_PahariEiJ_G0015312)	Scg3 (MGP_PahariEiJ_G0015311)	Lysmd2 (MGP_PahariEiJ_G0015310)	Tmod2 (MGP_PahariEiJ_G0015309)	Tmod3 (MGP_PahariEiJ_G0015308)	Leo1 (MGP_PahariEiJ_G0015307)	MGP_PahariEiJ_G0015306	Mapk6 (MGP_PahariEiJ_G0015305)	Bcl2l10 (MGP_PahariEiJ_G0015304)
Rat	MODERN SPECIES	18	Ddx43 (ENSRNOG00000050868)	AABR07070824.1 (ENSRNOG00000050216)	Ooep (ENSRNOG00000025957)	RGD1559995 (ENSRNOG00000000199)	Gsta2 (ENSRNOG00000029861)	AABR07070816.3 (ENSRNOG00000056051)	Gsta5 (ENSRNOG00000000201)	Gsta4 (ENSRNOG00000030449)	Rpl12-ps1 (ENSRNOG00000061579)	Cilk1 (ENSRNOG00000008691)	Fbxo9 (ENSRNOG00000008214)	Gcm1 (ENSRNOG00000007932)	Elovl5 (ENSRNOG00000006331)	Gclc (ENSRNOG00000006302)	Klhl31 (ENSRNOG00000006224)	Lrrc1 (ENSRNOG00000005970) ##22	Mlip (ENSRNOG00000005934)	Tinag (ENSRNOG00000058120)	Fam83b (ENSRNOG00000069372)	Hcrtr2 (ENSRNOG00000011251)	Gfral (ENSRNOG00000032063)	Hmgcll1 (ENSRNOG00000011193)	Bmp5 (ENSRNOG00000010917)	Scg3 (ENSRNOG00000010784)	Lysmd2 (ENSRNOG00000010642)	Tmod2 (ENSRNOG00000010447)	Tmod3 (ENSRNOG00000032436)	Leo1 (ENSRNOG00000010116)	Mapk6 (ENSRNOG00000009381)	Bcl2l10 (ENSRNOG00000009308)	Gnb5 (ENSRNOG00000047799)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Hystricomorpha	ANCESTRAL SPECIES	66								ENSGT00550000074943	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017	ENSGT00390000018879	ENSGT00940000155172	ENSGT00940000160069
Hystricomorpha_a	ANCESTRAL SPECIES	75	ENSGT00940000160069	ENSGT00390000001024	ENSGT00940000159781	ENSGT00530000063168.b	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00550000074943	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318
Hystricomorpha_b	ANCESTRAL SPECIES	41	ENSGT00940000160069	ENSGT00390000001024	ENSGT00940000159781	ENSGT00530000063168.b	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00550000074943	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318
Long-tailed chinchilla	MODERN SPECIES	118	ENSCLAG00000011269	ERMARD (ENSCLAG00000010666)	DLL1 (ENSCLAG00000012564)	FAM120B (ENSCLAG00000014467)	PSMB1 (ENSCLAG00000010944)	TBP (ENSCLAG00000010054)	PDCD2 (ENSCLAG00000009531)	ENSCLAG00000009706	ENSCLAG00000012277	CILK1 (ENSCLAG00000011418)	FBXO9 (ENSCLAG00000008452)	GCM1 (ENSCLAG00000010389)	ELOVL5 (ENSCLAG00000010843)	GCLC (ENSCLAG00000008717)	KLHL31 (ENSCLAG00000009090)	LRRC1 (ENSCLAG00000012395) ##22	ENSCLAG00000014553	TINAG (ENSCLAG00000012331)	ENSCLAG00000011218	FAM83B (ENSCLAG00000010709)	ENSCLAG00000008801	ENSCLAG00000011150	GFRAL (ENSCLAG00000015534)	HMGCLL1 (ENSCLAG00000010394)	BMP5 (ENSCLAG00000008951)	COL21A1 (ENSCLAG00000010282)
Degu	MODERN SPECIES	246	PSMB1 (ENSODEG00000000390)	TBP (ENSODEG00000000410)	PDCD2 (ENSODEG00000000428)	ENSODEG00000000462	ENSODEG00000000503	ENSODEG00000018555	GSTA4 (ENSODEG00000000531)	CILK1 (ENSODEG00000000575)	FBXO9 (ENSODEG00000000649)	GCM1 (ENSODEG00000000688)	ENSODEG00000000707	ENSODEG00000000730	ENSODEG00000000745	ENSODEG00000000777	KLHL31 (ENSODEG00000001216)	LRRC1 (ENSODEG00000001254) ##22	ENSODEG00000001370	ENSODEG00000001426	TINAG (ENSODEG00000001452)	FAM83B (ENSODEG00000001468)	ENSODEG00000001489	ENSODEG00000001496	GFRAL (ENSODEG00000001515)	HMGCLL1 (ENSODEG00000001557)	BMP5 (ENSODEG00000001622)	COL21A1 (ENSODEG00000001679)
Guinea pig	MODERN SPECIES	58	PHF10 (ENSCPOG00000022409)	DYNLT2 (ENSCPOG00000037938)	ERMARD (ENSCPOG00000011581)	DLL1 (ENSCPOG00000024133)	FAM120B (ENSCPOG00000032998)	PSMB1 (ENSCPOG00000001187)	TBP (ENSCPOG00000039966)	ENSCPOG00000003842	GSTA4 (ENSCPOG00000022871)	CILK1 (ENSCPOG00000000735)	FBXO9 (ENSCPOG00000001413)	GCM1 (ENSCPOG00000037784)	ELOVL5 (ENSCPOG00000004234)	GCLC (ENSCPOG00000008314)	KLHL31 (ENSCPOG00000005748)	LRRC1 (ENSCPOG00000003406) ##22	ENSCPOG00000008406
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000001107	ENSHGLG00000037783	ENSHGLG00000001833	ENSHGLG00000041737	ENSHGLG00000001927	ENSHGLG00000001976	ENSHGLG00000002026	FBXO9 (ENSHGLG00000002075)	ENSHGLG00000002156	GCM1 (ENSHGLG00000002179)	ELOVL5 (ENSHGLG00000050718)	Gclc (ENSHGLG00000002259)	ENSHGLG00000000290	KLHL31 (ENSHGLG00000002322)	ENSHGLG00000002382	LRRC1 (ENSHGLG00000032962) ##22	MLIP (ENSHGLG00000001624)	TINAG (ENSHGLG00000001736)	FAM83B (ENSHGLG00000001791)	HCRTR2 (ENSHGLG00000001848)	ENSHGLG00000001917	ENSHGLG00000006692	ENSHGLG00000035494	ENSHGLG00000045923	ENSHGLG00000000126	ENSHGLG00000041870	ENSHGLG00000007453	ENSHGLG00000037553	ENSHGLG00000047387	AZGP1 (ENSHGLG00000006938)	ZKSCAN1 (ENSHGLG00000010269)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Marmotini	ANCESTRAL SPECIES	18	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367.c.a	ENSGT00940000163367.c.b	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000169360	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367.c.a	ENSGT00940000163367.c.b	ENSGT00940000154526.h.i.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000169360	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Squirrel	MODERN SPECIES	76	EFHC1 (ENSSTOG00000012272)	TRAM2 (ENSSTOG00000013535)	TMEM14A (ENSSTOG00000034800)	ENSSTOG00000028449	ENSSTOG00000028252	ENSSTOG00000020625	ENSSTOG00000003609	ENSSTOG00000019919	GSTA4 (ENSSTOG00000012502)	CILK1 (ENSSTOG00000012510)	FBXO9 (ENSSTOG00000002185)	ENSSTOG00000014763	ENSSTOG00000015170	GCLC (ENSSTOG00000000903)	KLHL31 (ENSSTOG00000000904)	LRRC1 (ENSSTOG00000011192) ##22	MLIP (ENSSTOG00000021067)	TINAG (ENSSTOG00000011224)	FAM83B (ENSSTOG00000004736)	HCRTR2 (ENSSTOG00000006839)	GFRAL (ENSSTOG00000006853)	HMGCLL1 (ENSSTOG00000003393)	BMP5 (ENSSTOG00000002425)	COL21A1 (ENSSTOG00000019807)	DST (ENSSTOG00000004148)	BEND6 (ENSSTOG00000024640)	KIAA1586 (ENSSTOG00000025191)	ENSSTOG00000032091	BAG2 (ENSSTOG00000010958)	RAB23 (ENSSTOG00000010962)	PRIM2 (ENSSTOG00000024347)
Arctic ground squirrel	MODERN SPECIES	487					GSTA4 (ENSUPAG00010021236)	CILK1 (ENSUPAG00010021202)	FBXO9 (ENSUPAG00010021197)	ENSUPAG00010021194	GCM1 (ENSUPAG00010021185)	ELOVL5 (ENSUPAG00010021162)	ENSUPAG00010021158	GCLC (ENSUPAG00010021148)	KLHL31 (ENSUPAG00010021140)	ENSUPAG00010021135	ENSUPAG00010021129	LRRC1 (ENSUPAG00010021100) ##22	MLIP (ENSUPAG00010021027)
Alpin marmot	MODERN SPECIES	20	PAQR8 (ENSMMMG00000024636)	EFHC1 (ENSMMMG00000024637)	TRAM2 (ENSMMMG00000024638)	TMEM14A (ENSMMMG00000000009)	ENSMMMG00000000069	ENSMMMG00000000189	ENSMMMG00000000204	GSTA4 (ENSMMMG00000000272)	CILK1 (ENSMMMG00000000307)	ENSMMMG00000000398	ENSMMMG00000000458	ENSMMMG00000000473	ELOVL5 (ENSMMMG00000000490)	GCLC (ENSMMMG00000000505)	KLHL31 (ENSMMMG00000000549)	LRRC1 (ENSMMMG00000000561) ##22	ENSMMMG00000000666	TINAG (ENSMMMG00000000743)	FAM83B (ENSMMMG00000000773)	ENSMMMG00000000801	ENSMMMG00000000806	HCRTR2 (ENSMMMG00000000812)	GFRAL (ENSMMMG00000000859)	ENSMMMG00000000886	BMP5 (ENSMMMG00000000913)	ENSMMMG00000000937	DST (ENSMMMG00000000990)	ENSMMMG00000001382	KIAA1586 (ENSMMMG00000001393)	ZNF451 (ENSMMMG00000001407)	BAG2 (ENSMMMG00000001466)
Eurasian red squirrel	MODERN SPECIES	16	TRAM2 (ENSSVLG00005008921)	ENSSVLG00005008875	ENSSVLG00005008845	ENSSVLG00005008800	TMEM14A (ENSSVLG00005008760)	ENSSVLG00005008692	GSTA3 (ENSSVLG00005008617)	ENSSVLG00005008575	GSTA4 (ENSSVLG00005008538)	CILK1 (ENSSVLG00005008509)	FBXO9 (ENSSVLG00005008390)	GCM1 (ENSSVLG00005008319)	ELOVL5 (ENSSVLG00005008217)	GCLC (ENSSVLG00005008060)	KLHL31 (ENSSVLG00005008026)	LRRC1 (ENSSVLG00005008009) ##22	MLIP (ENSSVLG00005007746)	TINAG (ENSSVLG00005007583)	FAM83B (ENSSVLG00005007545)	HCRTR2 (ENSSVLG00005007503)	GFRAL (ENSSVLG00005007462)	HMGCLL1 (ENSSVLG00005007291)	BMP5 (ENSSVLG00005007184)	COL21A1 (ENSSVLG00005006844)	DST (ENSSVLG00005005376)	BEND6 (ENSSVLG00005004998)	KIAA1586 (ENSSVLG00005004977)	ENSSVLG00005004960	ZNF451 (ENSSVLG00005004848)	BAG2 (ENSSVLG00005004812)	RAB23 (ENSSVLG00005004785)
Primates	ANCESTRAL SPECIES	5	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h.e.a	ENSGT00940000163367	ENSGT00940000154526.h.e.b	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h.e.a	ENSGT00940000163367	ENSGT00940000154526.h.e.b	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862.b	ENSGT00390000015862.a.a	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Mouse lemur	MODERN SPECIES	28	TRAM2 (ENSMICG00000032391)	ENSMICG00000042743	ENSMICG00000026922	ENSMICG00000001561	ENSMICG00000041824	ENSMICG00000029781	GSTA4 (ENSMICG00000005858)	CILK1 (ENSMICG00000038462)	FBXO9 (ENSMICG00000008924)	GCM1 (ENSMICG00000030765)	ENSMICG00000042951	ELOVL5 (ENSMICG00000004038)	ENSMICG00000011320	GCLC (ENSMICG00000003751)	KLHL31 (ENSMICG00000016814)	LRRC1 (ENSMICG00000016820) ##22	ENSMICG00000030077	MLIP (ENSMICG00000016830)	TINAG (ENSMICG00000032404)	FAM83B (ENSMICG00000036577)	HCRTR2 (ENSMICG00000030742)	GFRAL (ENSMICG00000015172)	HMGCLL1 (ENSMICG00000015183)	BMP5 (ENSMICG00000008719)	COL21A1 (ENSMICG00000008733)	DST (ENSMICG00000011069)	ENSMICG00000042096	BEND6 (ENSMICG00000037952)	KIAA1586 (ENSMICG00000033000)	ZNF451 (ENSMICG00000014017)	BAG2 (ENSMICG00000043661)
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h.e.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862.b	ENSGT00390000015862.a.a	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064.a
Coquerels sifaka	MODERN SPECIES	412	PAQR8 (ENSPCOG00000013953)	EFHC1 (ENSPCOG00000026614)	TRAM2 (ENSPCOG00000020466)	TMEM14A (ENSPCOG00000019026)	ENSPCOG00000027305	ENSPCOG00000018411	GSTA5 (ENSPCOG00000020631)	ENSPCOG00000017536	GSTA4 (ENSPCOG00000024795)	CILK1 (ENSPCOG00000025293)	FBXO9 (ENSPCOG00000011211)	GCM1 (ENSPCOG00000013341)	ELOVL5 (ENSPCOG00000019780)	GCLC (ENSPCOG00000020387)	KLHL31 (ENSPCOG00000028812)	LRRC1 (ENSPCOG00000027793) ##22	MLIP (ENSPCOG00000017460)	ENSPCOG00000021227
Greater bamboo lemur	MODERN SPECIES	1217					GSTA3 (ENSPSMG00000002288)	ENSPSMG00000002272	GSTA4 (ENSPSMG00000002259)	CILK1 (ENSPSMG00000002227)	FBXO9 (ENSPSMG00000002181)	ENSPSMG00000002154	GCM1 (ENSPSMG00000002146)	ELOVL5 (ENSPSMG00000002065)	ENSPSMG00000002008	GCLC (ENSPSMG00000001883)	KLHL31 (ENSPSMG00000001812)	LRRC1 (ENSPSMG00000001745) ##22	ENSPSMG00000001698
Bushbaby	MODERN SPECIES	150	EFHC1 (ENSOGAG00000015937)	TRAM2 (ENSOGAG00000011863)	TMEM14A (ENSOGAG00000014698)	ENSOGAG00000014699	ENSOGAG00000026926	ENSOGAG00000003726	GSTA5 (ENSOGAG00000032237)	ENSOGAG00000031992	GSTA4 (ENSOGAG00000007865)	CILK1 (ENSOGAG00000007868)	FBXO9 (ENSOGAG00000007875)	GCM1 (ENSOGAG00000007879)	ELOVL5 (ENSOGAG00000004272)	GCLC (ENSOGAG00000007018)	KLHL31 (ENSOGAG00000012995)	LRRC1 (ENSOGAG00000013004) ##22	MLIP (ENSOGAG00000013009)	TINAG (ENSOGAG00000013011)	FAM83B (ENSOGAG00000013014)	HCRTR2 (ENSOGAG00000013018)	GFRAL (ENSOGAG00000013022)	HMGCLL1 (ENSOGAG00000013023)	BMP5 (ENSOGAG00000015672)	ENSOGAG00000034046	COL21A1 (ENSOGAG00000013170)	DST (ENSOGAG00000013181)	BEND6 (ENSOGAG00000004372)	ZNF451 (ENSOGAG00000000673)	BAG2 (ENSOGAG00000000675)	RAB23 (ENSOGAG00000005675)	ENSOGAG00000024997
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000163367	ENSGT00940000154526.h	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Tarsier	DUPLICATION
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	37																ENSTSYG00000006816 ##22
Tarsier	MODERN SPECIES	307																ENSTSYG00000035846 ##22
Tarsier	MODERN SPECIES	3049																ENSTSYG00000009184 ##22
Simiiformes	ANCESTRAL SPECIES	5	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00940000165163	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00390000010063.o.a	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Hominidae	ANCESTRAL SPECIES	5	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00940000165163	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00390000010063.o.a	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a.a	ENSGT00940000163367	ENSGT00940000164034.a.b	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00940000165163	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00390000010063.o.a	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a.a	ENSGT00940000163367	ENSGT00940000164034.a.b	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00940000165163	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00390000010063.o.a	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Pan	ANCESTRAL SPECIES	5	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a.a	ENSGT00940000163367	ENSGT00940000164034.a.b	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00940000165163	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00390000010063.o.a	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Chimpanzee	MODERN SPECIES	19	TRAM2 (ENSPTRG00000040958)	TMEM14A (ENSPTRG00000018279)	GSTA2 (ENSPTRG00000032454)	GSTA1 (ENSPTRG00000018280)	GSTA5 (ENSPTRG00000018284)	ENSPTRG00000048903	GSTA3 (ENSPTRG00000032453)	GSTA4 (ENSPTRG00000018285)	CILK1 (ENSPTRG00000018286)	FBXO9 (ENSPTRG00000018287)	GCM1 (ENSPTRG00000018288)	ELOVL5 (ENSPTRG00000018289)	ENSPTRG00000047369	GCLC (ENSPTRG00000018290)	KLHL31 (ENSPTRG00000018291)	LRRC1 (ENSPTRG00000018293) ##22	MLIP (ENSPTRG00000018294)	TINAG (ENSPTRG00000018295)	ENSPTRG00000049337	FAM83B (ENSPTRG00000018296)	ENSPTRG00000046475	HCRTR2 (ENSPTRG00000018297)	GFRAL (ENSPTRG00000018298)	HMGCLL1 (ENSPTRG00000018299)	BMP5 (ENSPTRG00000018300)	COL21A1 (ENSPTRG00000018302)	DST (ENSPTRG00000018303)	ENSPTRG00000038645	BEND6 (ENSPTRG00000018304)	KIAA1586 (ENSPTRG00000018305)	ZNF451 (ENSPTRG00000018306)
Bonobo	MODERN SPECIES	19	ENSPPAG00000043386	TRAM2 (ENSPPAG00000010782)	TMEM14A (ENSPPAG00000035341)	GSTA2 (ENSPPAG00000034591)	GSTA5 (ENSPPAG00000039462)	ENSPPAG00000008098	GSTA3 (ENSPPAG00000033156)	GSTA4 (ENSPPAG00000033249)	CILK1 (ENSPPAG00000037696)	FBXO9 (ENSPPAG00000043395)	GCM1 (ENSPPAG00000040280)	ELOVL5 (ENSPPAG00000035952)	ENSPPAG00000029855	GCLC (ENSPPAG00000035266)	KLHL31 (ENSPPAG00000033129)	LRRC1 (ENSPPAG00000034190) ##22	MLIP (ENSPPAG00000044049)	TINAG (ENSPPAG00000031445)	ENSPPAG00000026975	FAM83B (ENSPPAG00000028547)	HCRTR2 (ENSPPAG00000041925)	GFRAL (ENSPPAG00000038139)	HMGCLL1 (ENSPPAG00000031355)	BMP5 (ENSPPAG00000005216)	ENSPPAG00000034011	DST (ENSPPAG00000023253)	BEND6 (ENSPPAG00000038759)	KIAA1586 (ENSPPAG00000038232)	ZNF451 (ENSPPAG00000042859)	BAG2 (ENSPPAG00000039605)	RAB23 (ENSPPAG00000010023)
Human	MODERN SPECIES	18	TRAM2 (ENSG00000065308)	TMEM14A (ENSG00000096092)	GSTA2 (ENSG00000244067)	GSTA1 (ENSG00000243955)	GSTA5 (ENSG00000182793)	GSTA3 (ENSG00000174156)	GSTA4 (ENSG00000170899)	CILK1 (ENSG00000112144)	ENSG00000288614	FBXO9 (ENSG00000112146)	ENSG00000288646	GCM1 (ENSG00000137270)	ELOVL5 (ENSG00000012660)	GCLC (ENSG00000001084)	KLHL31 (ENSG00000124743)	LRRC1 (ENSG00000137269) ##22	MLIP (ENSG00000146147)	TINAG (ENSG00000137251)	FAM83B (ENSG00000168143)	HCRTR2 (ENSG00000137252)	GFRAL (ENSG00000187871)	HMGCLL1 (ENSG00000146151)	BMP5 (ENSG00000112175)	COL21A1 (ENSG00000124749)	DST (ENSG00000151914)	BEND6 (ENSG00000151917)	KIAA1586 (ENSG00000168116)	ZNF451 (ENSG00000112200)	BAG2 (ENSG00000112208)	RAB23 (ENSG00000112210)	PRIM2 (ENSG00000146143)
Gorilla	MODERN SPECIES	19	PAQR8 (ENSGGOG00000038667)	EFHC1 (ENSGGOG00000023504)	ENSGGOG00000039603	TRAM2 (ENSGGOG00000011922)	TMEM14A (ENSGGOG00000000773)	GSTA2 (ENSGGOG00000026997)	GSTA5 (ENSGGOG00000027587)	ENSGGOG00000024635	GSTA4 (ENSGGOG00000005376)	CILK1 (ENSGGOG00000000189)	FBXO9 (ENSGGOG00000006520)	GCM1 (ENSGGOG00000006527)	ELOVL5 (ENSGGOG00000011386)	GCLC (ENSGGOG00000006714)	KLHL31 (ENSGGOG00000016811)	LRRC1 (ENSGGOG00000003320) ##22	MLIP (ENSGGOG00000012021)	TINAG (ENSGGOG00000002367)	ENSGGOG00000042043	FAM83B (ENSGGOG00000002212)	HCRTR2 (ENSGGOG00000024546)	GFRAL (ENSGGOG00000022175)	ENSGGOG00000009484	ENSGGOG00000002061	ENSGGOG00000034842	DST (ENSGGOG00000022359)	ENSGGOG00000038350	BEND6 (ENSGGOG00000000788)	ENSGGOG00000036795	KIAA1586 (ENSGGOG00000010863)	ZNF451 (ENSGGOG00000036272)
Orangutan	MODERN SPECIES	19	IL17F (ENSPPYG00000016704)	MCM3 (ENSPPYG00000016705)	EFHC1 (ENSPPYG00000016707)	ENSPPYG00000039550	TRAM2 (ENSPPYG00000016708)	TMEM14A (ENSPPYG00000030434)	ENSPPYG00000038815	GSTA3 (ENSPPYG00000016714)	GSTA4 (ENSPPYG00000016715)	CILK1 (ENSPPYG00000016716)	FBXO9 (ENSPPYG00000016718)	GCM1 (ENSPPYG00000016719)	ELOVL5 (ENSPPYG00000016720)	GCLC (ENSPPYG00000016722)	KLHL31 (ENSPPYG00000016724)	LRRC1 (ENSPPYG00000016725) ##22	ENSPPYG00000039927	MLIP (ENSPPYG00000016727)	TINAG (ENSPPYG00000016728)	FAM83B (ENSPPYG00000016729)	HCRTR2 (ENSPPYG00000016730)	GFRAL (ENSPPYG00000016731)	HMGCLL1 (ENSPPYG00000016732)	BMP5 (ENSPPYG00000016733)	COL21A1 (ENSPPYG00000016734)	DST (ENSPPYG00000016735)	BEND6 (ENSPPYG00000016736)	KIAA1586 (ENSPPYG00000040363)	ZNF451 (ENSPPYG00000016737)	BAG2 (ENSPPYG00000030596)	RAB23 (ENSPPYG00000016739)
Gibbon	MODERN SPECIES	14	PAQR8 (ENSNLEG00000028996)	EFHC1 (ENSNLEG00000003764)	TRAM2 (ENSNLEG00000003748)	TMEM14A (ENSNLEG00000027983)	GSTA1 (ENSNLEG00000003684)	GSTA5 (ENSNLEG00000027295)	GSTA3 (ENSNLEG00000003666)	GSTA4 (ENSNLEG00000003648)	CILK1 (ENSNLEG00000003607)	FBXO9 (ENSNLEG00000003558)	GCM1 (ENSNLEG00000003544)	ELOVL5 (ENSNLEG00000003499)	ENSNLEG00000032611	GCLC (ENSNLEG00000003422)	KLHL31 (ENSNLEG00000003415)	LRRC1 (ENSNLEG00000003412) ##22	MLIP (ENSNLEG00000003365)	TINAG (ENSNLEG00000003332)	ENSNLEG00000030182	FAM83B (ENSNLEG00000003315)	HCRTR2 (ENSNLEG00000003303)	GFRAL (ENSNLEG00000003300)	HMGCLL1 (ENSNLEG00000003266)	BMP5 (ENSNLEG00000003231)	COL21A1 (ENSNLEG00000002997)	ENSNLEG00000032818	DST (ENSNLEG00000002929)	ENSNLEG00000034098	BEND6 (ENSNLEG00000002914)	ENSNLEG00000032435	KIAA1586 (ENSNLEG00000002898)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00910000147663	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000000903.a.f.a.b.a	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000000903.a.f.a.b.a	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00390000014122.i.b.a.a.a.a.c.b	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00910000147663	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000000903.a.f.a.b.a	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00390000014122.i.b.a.a.a.a.c.b	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000161882	ENSGT00940000156618	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00390000013639
Rhesus	MODERN SPECIES	14	MCM3 (ENSMMUG00000021149)	PAQR8 (ENSMMUG00000052626)	EFHC1 (ENSMMUG00000013716)	TRAM2 (ENSMMUG00000013718)	TMEM14A (ENSMMUG00000060163)	GSTA2 (ENSMMUG00000017137)	GSTA4 (ENSMMUG00000014899)	ENSMMUG00000058208	CILK1 (ENSMMUG00000005344)	FBXO9 (ENSMMUG00000005340)	GCM1 (ENSMMUG00000022083)	ELOVL5 (ENSMMUG00000006422)	GCLC (ENSMMUG00000008684)	KLHL31 (ENSMMUG00000023789)	ENSMMUG00000059097	LRRC1 (ENSMMUG00000011049) ##22	MLIP (ENSMMUG00000012781)	TINAG (ENSMMUG00000012784)	FAM83B (ENSMMUG00000000815)	HCRTR2 (ENSMMUG00000001395)	GFRAL (ENSMMUG00000051331)	ENSMMUG00000051828	HMGCLL1 (ENSMMUG00000001399)	BMP5 (ENSMMUG00000011858)	COL21A1 (ENSMMUG00000007616)	ENSMMUG00000052162	DST (ENSMMUG00000000777)	BEND6 (ENSMMUG00000000795)	ZNF451 (ENSMMUG00000018582)	RAB23 (ENSMMUG00000018003)	ENSMMUG00000029598
Pig-tailed macaque	MODERN SPECIES	174	ENSMNEG00000007313	EFHC1 (ENSMNEG00000041404)	TRAM2 (ENSMNEG00000032001)	TMEM14A (ENSMNEG00000035396)	GSTA3 (ENSMNEG00000037930)	ENSMNEG00000034303	GSTA4 (ENSMNEG00000018065)	CILK1 (ENSMNEG00000032820)	FBXO9 (ENSMNEG00000041281)	GCM1 (ENSMNEG00000037532)	ELOVL5 (ENSMNEG00000044116)	GCLC (ENSMNEG00000035105)	ENSMNEG00000035875	KLHL31 (ENSMNEG00000033545)	ENSMNEG00000038147	LRRC1 (ENSMNEG00000029924) ##22	MLIP (ENSMNEG00000040551)	TINAG (ENSMNEG00000036616)	FAM83B (ENSMNEG00000035498)
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000000903.a.f.a.b.a	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00390000014122.i.b.a.a.a.a.c.b	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Olive baboon	MODERN SPECIES	16	GSTA4 (ENSPANG00000007356)	CILK1 (ENSPANG00000016921)	FBXO9 (ENSPANG00000015587)	GCM1 (ENSPANG00000037213)	ENSPANG00000038301	ENSPANG00000042447	ENSPANG00000039030	ELOVL5 (ENSPANG00000013429)	ENSPANG00000041153	ENSPANG00000037335	GCLC (ENSPANG00000016920)	ENSPANG00000030362	ENSPANG00000039927	KLHL31 (ENSPANG00000005758)	ENSPANG00000051191	LRRC1 (ENSPANG00000005018) ##22	MLIP (ENSPANG00000011495)	ENSPANG00000040964	TINAG (ENSPANG00000017090)	ENSPANG00000040600	HCRTR2 (ENSPANG00000017773)	GFRAL (ENSPANG00000008942)	HMGCLL1 (ENSPANG00000000755)	BMP5 (ENSPANG00000033450)	COL21A1 (ENSPANG00000015183)	DST (ENSPANG00000016027)	BEND6 (ENSPANG00000011220)	ZNF451 (ENSPANG00000011259)	BAG2 (ENSPANG00000015808)	RAB23 (ENSPANG00000017772)	PRIM2 (ENSPANG00000021142)
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00940000158206	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00390000005254.i.a.a.a.b.a.b	ENSGT00940000158352	ENSGT00390000000903.a.f.a.b.a	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00390000014122.i.b.a.a.a.a.c.b	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000155494.f.b	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590
Sooty mangabey	MODERN SPECIES	97	ENSCATG00000021876	EFHC1 (ENSCATG00000038309)	TRAM2 (ENSCATG00000029584)	TMEM14A (ENSCATG00000043586)	GSTA2 (ENSCATG00000033148)	ENSCATG00000040439	GSTA4 (ENSCATG00000027052)	CILK1 (ENSCATG00000041316)	FBXO9 (ENSCATG00000019206)	GCM1 (ENSCATG00000008922)	ELOVL5 (ENSCATG00000041100)	GCLC (ENSCATG00000033054)	ENSCATG00000018676	KLHL31 (ENSCATG00000044715)	ENSCATG00000020528	LRRC1 (ENSCATG00000022505) ##22	MLIP (ENSCATG00000036438)	TINAG (ENSCATG00000021018)	FAM83B (ENSCATG00000039759)	HCRTR2 (ENSCATG00000028771)	GFRAL (ENSCATG00000044981)	HMGCLL1 (ENSCATG00000030227)	ENSCATG00000038476	BMP5 (ENSCATG00000038039)	COL21A1 (ENSCATG00000034013)	DST (ENSCATG00000032609)	ENSCATG00000036494	BEND6 (ENSCATG00000036894)	KIAA1586 (ENSCATG00000035835)	ZNF451 (ENSCATG00000038473)	BAG2 (ENSCATG00000043003)
Drill	MODERN SPECIES	817	TMEM14A (ENSMLEG00000043906)	GSTA2 (ENSMLEG00000027727)	GSTA1 (ENSMLEG00000043178)	GSTA5 (ENSMLEG00000036948)	GSTA3 (ENSMLEG00000037252)	GSTA4 (ENSMLEG00000042277)	CILK1 (ENSMLEG00000006267)	FBXO9 (ENSMLEG00000043788)	GCM1 (ENSMLEG00000035639)	ENSMLEG00000004252	ELOVL5 (ENSMLEG00000041247)	GCLC (ENSMLEG00000041190)	ENSMLEG00000005454	KLHL31 (ENSMLEG00000044008)	ENSMLEG00000001868	LRRC1 (ENSMLEG00000039785) ##22	MLIP (ENSMLEG00000039543)	TINAG (ENSMLEG00000039572)	FAM83B (ENSMLEG00000033866)	HCRTR2 (ENSMLEG00000032422)	GFRAL (ENSMLEG00000039080)	HMGCLL1 (ENSMLEG00000018567)
Vervet Monkey	MODERN SPECIES	8	TRAM2 (ENSCSAG00000013065)	TMEM14A (ENSCSAG00000013069)	GSTA1 (ENSCSAG00000013074)	GSTA5 (ENSCSAG00000013097)	GSTA2 (ENSCSAG00000013108)	ENSCSAG00000013119	GSTA4 (ENSCSAG00000013126)	CILK1 (ENSCSAG00000013132)	FBXO9 (ENSCSAG00000013142)	GCM1 (ENSCSAG00000013148)	ELOVL5 (ENSCSAG00000013156)	GCLC (ENSCSAG00000013162)	KLHL31 (ENSCSAG00000013164)	ENSCSAG00000013177	ENSCSAG00000019293	LRRC1 (ENSCSAG00000013185) ##22	MLIP (ENSCSAG00000013194)	TINAG (ENSCSAG00000013200)	FAM83B (ENSCSAG00000013206)	HCRTR2 (ENSCSAG00000013222)	GFRAL (ENSCSAG00000013236)	HMGCLL1 (ENSCSAG00000013243)	BMP5 (ENSCSAG00000013256)	COL21A1 (ENSCSAG00000013320)	DST (ENSCSAG00000013375)	BEND6 (ENSCSAG00000013396)	KIAA1586 (ENSCSAG00000013408)	ZNF451 (ENSCSAG00000013418)	BAG2 (ENSCSAG00000013425)	RAB23 (ENSCSAG00000013438)	PRIM2 (ENSCSAG00000013452)
Rhinopithecus	ANCESTRAL SPECIES	318		ENSGT00530000063528.A.a	ENSGT00910000147663	ENSGT00510000046470.a.b	ENSGT00940000164034.b	ENSGT00940000164034.a	ENSGT00940000163367	ENSGT00940000164319	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065
Black snub-nosed monkey	MODERN SPECIES	65													GCLC (ENSRBIG00000036124)	KLHL31 (ENSRBIG00000033323)	ENSRBIG00000036863	LRRC1 (ENSRBIG00000026945) ##22	MLIP (ENSRBIG00000041583)
Golden snub-nosed monkey	MODERN SPECIES	617	ENSRROG00000039209	ENSRROG00000023565	EFHC1 (ENSRROG00000022951)	TRAM2 (ENSRROG00000036043)	ENSRROG00000030207	TMEM14A (ENSRROG00000041634)	ENSRROG00000041870	GSTA1 (ENSRROG00000044471)	GSTA4 (ENSRROG00000029994)	CILK1 (ENSRROG00000034096)	FBXO9 (ENSRROG00000029600)	GCM1 (ENSRROG00000032236)	ELOVL5 (ENSRROG00000038948)	GCLC (ENSRROG00000039518)	KLHL31 (ENSRROG00000034480)	LRRC1 (ENSRROG00000039946) ##22	ENSRROG00000031084	MLIP (ENSRROG00000029163)	ENSRROG00000011633	TINAG (ENSRROG00000035923)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034	ENSGT00940000164319.a.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT00390000000938.p.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000166175	ENSGT00390000016954	ENSGT00390000011354.c	ENSGT00940000162903.f	ENSGT00390000011354.d	ENSGT00390000017590
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000164034	ENSGT00940000164319.a.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT00390000000938.p.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000169360	ENSGT00390000016954	ENSGT00390000011354.c	ENSGT00390000017590	ENSGT00940000155064.d	ENSGT00390000009790.u
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000163367	ENSGT00940000164319.a.b	ENSGT00940000164319.a.a	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT00390000000938.p.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00940000169360
Capuchin	MODERN SPECIES	148	EFHC1 (ENSCCAG00000016309)	TRAM2 (ENSCCAG00000023806)	TMEM14A (ENSCCAG00000035958)	ENSCCAG00000003496	ENSCCAG00000024288	ENSCCAG00000030512	GSTA4 (ENSCCAG00000021314)	CILK1 (ENSCCAG00000036719)	ENSCCAG00000033768	FBXO9 (ENSCCAG00000034208)	GCM1 (ENSCCAG00000035036)	ENSCCAG00000036125	ELOVL5 (ENSCCAG00000037812)	GCLC (ENSCCAG00000019369)	KLHL31 (ENSCCAG00000006837)	LRRC1 (ENSCCAG00000023965) ##22	MLIP (ENSCCAG00000023995)	TINAG (ENSCCAG00000021536)	ENSCCAG00000032578	FAM83B (ENSCCAG00000035242)	HCRTR2 (ENSCCAG00000034145)	GFRAL (ENSCCAG00000025952)	HMGCLL1 (ENSCCAG00000019117)	BMP5 (ENSCCAG00000024254)	COL21A1 (ENSCCAG00000034882)
Bolivian squirrel monkey	MODERN SPECIES	59	TAP2 (ENSSBOG00000021205)	PSMB8 (ENSSBOG00000026986)	TAP1 (ENSSBOG00000027226)	PSMB9 (ENSSBOG00000022067)	TMEM14A (ENSSBOG00000022452)	GSTA5 (ENSSBOG00000023195)	ENSSBOG00000025505	GSTA4 (ENSSBOG00000020856)	CILK1 (ENSSBOG00000017283)	FBXO9 (ENSSBOG00000019141)	GCM1 (ENSSBOG00000005634)	ENSSBOG00000021942	ELOVL5 (ENSSBOG00000034870)	GCLC (ENSSBOG00000023419)	KLHL31 (ENSSBOG00000033630)	LRRC1 (ENSSBOG00000035746) ##22	MLIP (ENSSBOG00000026309)	TINAG (ENSSBOG00000032103)	FAM83B (ENSSBOG00000024939)	HCRTR2 (ENSSBOG00000025741)	GFRAL (ENSSBOG00000035990)	HMGCLL1 (ENSSBOG00000035484)	BMP5 (ENSSBOG00000026475)	COL21A1 (ENSSBOG00000026503)	DST (ENSSBOG00000027054)	ENSSBOG00000022537	ENSSBOG00000023362	ENSSBOG00000034355	BAG2 (ENSSBOG00000033323)	RAB23 (ENSSBOG00000033237)	PRIM2 (ENSSBOG00000033256)
Marmoset	MODERN SPECIES	16	PAQR8 (ENSCJAG00000011379)	EFHC1 (ENSCJAG00000011346)	TRAM2 (ENSCJAG00000011314)	ENSCJAG00000082568	TMEM14A (ENSCJAG00000011309)	ENSCJAG00000066217	ENSCJAG00000060605	ENSCJAG00000034823	GSTA4 (ENSCJAG00000011268)	CILK1 (ENSCJAG00000011214)	FBXO9 (ENSCJAG00000042701)	GCM1 (ENSCJAG00000079175)	ELOVL5 (ENSCJAG00000011119)	GCLC (ENSCJAG00000011063)	KLHL31 (ENSCJAG00000011053)	LRRC1 (ENSCJAG00000010969) ##22	MLIP (ENSCJAG00000010939)	TINAG (ENSCJAG00000010887)	ENSCJAG00000079274	ENSCJAG00000086274	FAM83B (ENSCJAG00000057418)	ENSCJAG00000072713	HCRTR2 (ENSCJAG00000010863)	GFRAL (ENSCJAG00000010859)	HMGCLL1 (ENSCJAG00000010832)	BMP5 (ENSCJAG00000010807)	COL21A1 (ENSCJAG00000010723)	DST (ENSCJAG00000010349)	ENSCJAG00000072276	ENSCJAG00000070680	ENSCJAG00000077573
Mas night monkey	MODERN SPECIES	993	ENSANAG00000030800	TMEM14A (ENSANAG00000021933)	ENSANAG00000016846	ENSANAG00000037760	ENSANAG00000014954	GSTA4 (ENSANAG00000037353)	CILK1 (ENSANAG00000018446)	FBXO9 (ENSANAG00000037929)	GCM1 (ENSANAG00000018757)	ENSANAG00000031805	ELOVL5 (ENSANAG00000027703)	ENSANAG00000027917	GCLC (ENSANAG00000036685)	KLHL31 (ENSANAG00000032720)	ENSANAG00000025310	LRRC1 (ENSANAG00000037971) ##22	MLIP (ENSANAG00000028044)	TINAG (ENSANAG00000027671)	FAM83B (ENSANAG00000029837)	HCRTR2 (ENSANAG00000031979)	GFRAL (ENSANAG00000030650)	HMGCLL1 (ENSANAG00000034775)	BMP5 (ENSANAG00000026570)	COL21A1 (ENSANAG00000029317)	DST (ENSANAG00000023133)	ENSANAG00000027563	BEND6 (ENSANAG00000034932)	KIAA1586 (ENSANAG00000031726)	ZNF451 (ENSANAG00000027796)	ENSANAG00000012250	ENSANAG00000027052
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000158302.d.a	ENSGT00940000153769.C	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Xenarthra	ANCESTRAL SPECIES	1684															ENSGT00940000158352	ENSGT00940000154025.b ##22
Armadillo	MODERN SPECIES	3620															KLHL31 (ENSDNOG00000020031)	LRRC1 (ENSDNOG00000048605) ##22
Sloth	MODERN SPECIES	3010																LRRC1 (ENSCHOG00000009875) ##22
Afrotheria	ANCESTRAL SPECIES	24	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644
Tenrec	MODERN SPECIES	3326																LRRC1 (ENSETEG00000019664) ##22
Afrotheria_a	ANCESTRAL SPECIES	23	ENSGT01050000244824.B	ENSGT00940000159860	ENSGT00530000063528.A.a	ENSGT00510000046470.a.b	ENSGT00940000158206	ENSGT00940000166012	ENSGT00940000154526.h	ENSGT00940000161750	ENSGT00940000162778	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b	ENSGT00390000011908	ENSGT00940000158352	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644
Hyrax	MODERN SPECIES	2721																LRRC1 (ENSPCAG00000015167) ##22
Elephant	MODERN SPECIES	1	PAQR8 (ENSLAFG00000009293)	EFHC1 (ENSLAFG00000005509)	TRAM2 (ENSLAFG00000005516)	TMEM14A (ENSLAFG00000001644)	ENSLAFG00000026604	ENSLAFG00000027205	ENSLAFG00000031720	ENSLAFG00000031171	GSTA4 (ENSLAFG00000005012)	CILK1 (ENSLAFG00000005014)	FBXO9 (ENSLAFG00000012088)	GCM1 (ENSLAFG00000012093)	ELOVL5 (ENSLAFG00000018020)	GCLC (ENSLAFG00000018430)	KLHL31 (ENSLAFG00000003844)	LRRC1 (ENSLAFG00000014500) ##22	MLIP (ENSLAFG00000001656)	TINAG (ENSLAFG00000007858)	FAM83B (ENSLAFG00000011864)	HCRTR2 (ENSLAFG00000000168)	GFRAL (ENSLAFG00000000170)	HMGCLL1 (ENSLAFG00000022387)	BMP5 (ENSLAFG00000015978)	ENSLAFG00000031231	ENSLAFG00000022202	DST (ENSLAFG00000009708)	BEND6 (ENSLAFG00000020660)	ZNF451 (ENSLAFG00000007200)	BAG2 (ENSLAFG00000007207)	RAB23 (ENSLAFG00000007209)	PRIM2 (ENSLAFG00000006311)
Platypus	MODERN SPECIES		CYP1B1 (ENSOANG00000046579)	YIPF4 (ENSOANG00000004756)	BIRC6 (ENSOANG00000004758)	TTC27 (ENSOANG00000002333)	LTBP1 (ENSOANG00000002334)	RASGRP3 (ENSOANG00000002336)	ENSOANG00000002340	ENSOANG00000021254	CILK1 (ENSOANG00000041751)	FBXO9 (ENSOANG00000002341)	GCM1 (ENSOANG00000048416)	ELOVL5 (ENSOANG00000011799)	GCLC (ENSOANG00000002861)	KLHL31 (ENSOANG00000031343)	ENSOANG00000005996	LRRC1 (ENSOANG00000037357) ##22	TINAG (ENSOANG00000003592)	ENSOANG00000037791	FAM83B (ENSOANG00000013832)	ENSOANG00000001461	ENSOANG00000040855	ENSOANG00000051235	HMGCLL1 (ENSOANG00000050502)	BMP5 (ENSOANG00000048834)	ENSOANG00000010078	ENSOANG00000037887 #19	ENSOANG00000028846	ENSOANG00000044351	ZNF451 (ENSOANG00000013803)	BAG2 (ENSOANG00000045205)	RAB23 (ENSOANG00000036074)
Anura	ANCESTRAL SPECIES	8	ENSGT00940000153798.A.a	ENSGT00940000161983	ENSGT00940000157057	ENSGT00940000155701.D	ENSGT00390000018842	ENSGT00940000158430	ENSGT00940000158206	ENSGT00940000161750	ENSGT00940000158807	ENSGT00390000014256	ENSGT00390000006777.a	ENSGT01050000244838.C.b.j	ENSGT00390000011908	ENSGT00940000158352	ENSGT00390000002428.b	ENSGT00940000154025.b ##22	ENSGT00390000015862	ENSGT00940000161065	ENSGT00940000157889	ENSGT01070000253744.a.a.b.b	ENSGT00730000111274	ENSGT00940000159467	ENSGT00940000158644	ENSGT00940000153769.C	ENSGT00940000168119	ENSGT00940000155008.C.b	ENSGT00940000162855.a.a	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064	ENSGT00390000009790
Leishan spiny toad	MODERN SPECIES	7	TMEM14A (ENSLLEG00000008779)	ENSLLEG00000008701	ENSLLEG00000008684	ENSLLEG00000008637	ENSLLEG00000008609	ENSLLEG00000008537	ENSLLEG00000008504	CILK1 (ENSLLEG00000008407)	FBXO9 (ENSLLEG00000008281)	GCM1 (ENSLLEG00000008240)	ENSLLEG00000008082	GCLC (ENSLLEG00000007881)	KLHL31 (ENSLLEG00000007809)	ENSLLEG00000007555	ENSLLEG00000007512	LRRC1 (ENSLLEG00000007432) ##22	ENSLLEG00000007412	ENSLLEG00000007240	TINAG (ENSLLEG00000007159)	ENSLLEG00000006911	ENSLLEG00000006875	ENSLLEG00000006816	CAMK2N2 (ENSLLEG00000006789)	ENSLLEG00000006777	EEF1AKMT4 (ENSLLEG00000006753)	ALG3 (ENSLLEG00000006707)	VWA5B2 (ENSLLEG00000006640)	ENSLLEG00000006612	ENSLLEG00000006135	ENSLLEG00000006072	ABCF3 (ENSLLEG00000005959)
Frog	MODERN SPECIES	5	ENSXETG00000044278	csmd1 (ENSXETG00000007710)	ENSXETG00000049400	angpt2 (ENSXETG00000035935)	mcph1 (ENSXETG00000015950)	tmem14a (ENSXETG00000015964)	ENSXETG00000036388	gsta4 (ENSXETG00000036364)	cilk1 (ENSXETG00000015974)	fbxo9 (ENSXETG00000015980)	gcm1 (ENSXETG00000027375)	elovl5 (ENSXETG00000015994)	gclc (ENSXETG00000016009)	klhl31 (ENSXETG00000001616)	ENSXETG00000021628	lrrc1 (ENSXETG00000001618) ##22	mlip (ENSXETG00000043502)	fam83b (ENSXETG00000001621)	hcrtr2 (ENSXETG00000001622)	hmgcll1 (ENSXETG00000007070)	bmp5 (ENSXETG00000007071)	ENSXETG00000022756	ENSXETG00000032045	ENSXETG00000042649	ENSXETG00000049170	dst (ENSXETG00000022769)	bag2 (ENSXETG00000022850)	rab23 (ENSXETG00000037818)	prim2 (ENSXETG00000004450)	ENSXETG00000041472	ENSXETG00000044834
Elephant shark	MODERN SPECIES	1517	csmd1a (ENSCMIG00000016397)	ENSCMIG00000016400	mcph1 (ENSCMIG00000016403)	ANGPT2 (ENSCMIG00000016421)	agpat5 (ENSCMIG00000016452)	tmem14a (ENSCMIG00000016468)	ENSCMIG00000016472	CILK1 (ENSCMIG00000016485)	fbxo9 (ENSCMIG00000016534)	ENSCMIG00000016593	elovl5 (ENSCMIG00000016594)	gclc (ENSCMIG00000016598)	ENSCMIG00000016613	klhl31 (ENSCMIG00000016616)	rpl11 (ENSCMIG00000016623)	lrrc1 (ENSCMIG00000016646) ##22	ENSCMIG00000016666	FAM83B (ENSCMIG00000016676)	hcrtr2 (ENSCMIG00000016689)	GFRAL (ENSCMIG00000016699)	ENSCMIG00000016704	HMGCLL1 (ENSCMIG00000016706)	bmp5 (ENSCMIG00000016720)	ENSCMIG00000016732	ENSCMIG00000016738	ENSCMIG00000016742	ENSCMIG00000016743	DST (ENSCMIG00000016868)	ZNF451 (ENSCMIG00000017110)	bag2 (ENSCMIG00000017112)	rab23 (ENSCMIG00000017114)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154025 #22
Lamprey	MODERN SPECIES	2464																scrib (ENSPMAG00000008681) #22
Hagfish	MODERN SPECIES	250											ENSEBUG00000006416	ENSEBUG00000009913	ENSEBUG00000013055	ENSEBUG00000000488	ENSEBUG00000007498	scrib (ENSEBUG00000011080) #22	ENSEBUG00000013762	ENSEBUG00000008710	ENSEBUG00000003595	CASQ1 (ENSEBUG00000007714)	zgc:92045 (ENSEBUG00000014533)	ENSEBUG00000005738	ENSEBUG00000007160	ENSEBUG00000003034	ENSEBUG00000015512	ENSEBUG00000008311	ENSEBUG00000016744	ENSEBUG00000003335	ENSEBUG00000015528	ENSEBUG00000002395	ENSEBUG00000005478