Ovalentaria ANCESTRAL SPECIES 21 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00950000183116.b.a.b.a ENSGT00980000198805 ENSGT00940000167286 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00390000000911.g #9 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 ENSGT00940000155807.a #24 ENSGT00940000175338 #25 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Pomacentridae ANCESTRAL SPECIES 11 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00390000000911.g #9 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 ENSGT00940000155807.a #24 ENSGT00940000175338 #25 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00390000000911.g #9 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 ENSGT00940000155807.a #24 ENSGT00940000175338 #25 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00520000059940 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Amphiprion ANCESTRAL SPECIES 65 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00390000000911.g #9 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 Orange clownfish MODERN SPECIES 14 ENSAPEG00000009214 MMP16 (ENSAPEG00000009282) #7 pomp (ENSAPEG00000009330) #8 ENSAPEG00000009360 #9 RAMP3 (ENSAPEG00000009435) #11 MYH6 (ENSAPEG00000009443) #12 SLC22A17 (ENSAPEG00000009562) #13 ENSAPEG00000009573 #14 ngdn (ENSAPEG00000009589) #15 pabpn1 (ENSAPEG00000009623) #16 ENSAPEG00000009633 #17 thtpa (ENSAPEG00000009647) #18 dcaf11 (ENSAPEG00000009669) #19 FITM1 (ENSAPEG00000009719) #20 psme1 (ENSAPEG00000009724) #21 pck2 (ENSAPEG00000009747) #22 ENSAPEG00000009795 #23 ENSAPEG00000009816 #23 ENSAPEG00000009835 ENSAPEG00000009908 VOPP1 (ENSAPEG00000009936) lancl2 (ENSAPEG00000009945) tgfbr1b (ENSAPEG00000010010) RECK (ENSAPEG00000010043) hccsb (ENSAPEG00000010117) ENSAPEG00000010182 ptbp2a (ENSAPEG00000010192) ENSAPEG00000010251 ENSAPEG00000010266 snx7 (ENSAPEG00000010291) plppr5b (ENSAPEG00000010333) Clown anemonefish MODERN SPECIES 1824 ENSAOCG00000001975 #14 ngdn (ENSAOCG00000015818) #15 pabpn1 (ENSAOCG00000015805) #16 ENSAOCG00000015789 #17 thtpa (ENSAOCG00000015776) #18 dcaf11 (ENSAOCG00000002771) #19 FITM1 (ENSAOCG00000015700) #20 psme1 (ENSAOCG00000015688) #21 pck2 (ENSAOCG00000015666) #22 ENSAOCG00000015622 #23 ENSAOCG00000015586 ENSAOCG00000015360 Spiny chromis MODERN SPECIES 345 ENSAPOG00000014198 #20 psme1 (ENSAPOG00000014258) #21 pck2 (ENSAPOG00000000393) #22 fen1 (ENSAPOG00000014417) #24 tm9sf1 (ENSAPOG00000014466) #26 ENSAPOG00000014505 pdcd6 (ENSAPOG00000014580) #31 zgc:101569 (ENSAPOG00000014623) #32 bmp6 (ENSAPOG00000014657) #33 txndc5 (ENSAPOG00000014699) #34 bloc1s5 (ENSAPOG00000014707) #35 EEF1E1 (ENSAPOG00000014728) #36 slc35b3 (ENSAPOG00000014778) #37 ENSAPOG00000000416 tfap2a (ENSAPOG00000014924) tmem14ca (ENSAPOG00000014952) mak (ENSAPOG00000015146) PLCXD2 (ENSAPOG00000015194) Bicolor damselfish MODERN SPECIES 1066 RAMP3 (ENSSPAG00000021784) #11 smyhc1 (ENSSPAG00000021724) #12 SLC22A17 (ENSSPAG00000021696) #13 cebp1 (ENSSPAG00000021689) #14 ngdn (ENSSPAG00000021672) #15 pabpn1 (ENSSPAG00000021658) #16 ENSSPAG00000021647 thtpa (ENSSPAG00000021613) #18 dcaf11 (ENSSPAG00000021554) #19 FITM1 (ENSSPAG00000021547) #20 psme1 (ENSSPAG00000021536) #21 pck2 (ENSSPAG00000021511) #22 Cichlidae ANCESTRAL SPECIES 18 ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940.f ENSGT00550000075074 #28 ENSGT00400000023815.e #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940.f ENSGT00550000075074 #28 ENSGT00400000023815.e #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Haplochromini ANCESTRAL SPECIES 21 ENSGT00940000153725.a.b.b ENSGT00940000164689 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940.f ENSGT00550000075074 #28 ENSGT00400000023815.e #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Burton s mouthbrooder MODERN SPECIES 745 rgs9bp (ENSHBUG00000019187) zgc:56231 (ENSHBUG00000019234) pomp (ENSHBUG00000019278) #8 C11orf65 (ENSHBUG00000019309) #10 RAMP3 (ENSHBUG00000000573) #11 MYH6 (ENSHBUG00000019431) #12 ENSHBUG00000019445 #13 ENSHBUG00000000581 #14 ngdn (ENSHBUG00000019489) #15 pabpn1 (ENSHBUG00000019523) #16 ENSHBUG00000019533 #17 thtpa (ENSHBUG00000019630) #18 dcaf11 (ENSHBUG00000019653) #19 ENSHBUG00000019671 #20 psme1 (ENSHBUG00000019773) #21 pck2 (ENSHBUG00000019834) #22 Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00940000153725.a.b.b ENSGT00940000164689 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940.f ENSGT01000000216822 ENSGT00550000075074 #28 ENSGT00400000023815.e #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00940000158957 ENSGT00940000153725.a.b.b ENSGT00940000164689 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940.f ENSGT01000000216822 ENSGT00550000075074 #28 ENSGT00400000023815.e #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Zebra mbuna MODERN SPECIES 26 zgc:165532 (ENSMZEG00005011645) rgs9bp (ENSMZEG00005011659) zgc:56231 (ENSMZEG00005011672) pomp (ENSMZEG00005011723) #8 C11orf65 (ENSMZEG00005011742) #10 RAMP3 (ENSMZEG00005011753) #11 smyhc1 (ENSMZEG00005011789) #12 ENSMZEG00005011848 #13 ENSMZEG00005011861 #14 ngdn (ENSMZEG00005011874) #15 pabpn1 (ENSMZEG00005011904) #16 thtpa (ENSMZEG00005011917) #18 dcaf11 (ENSMZEG00005011945) #19 ENSMZEG00005011977 #20 psme1 (ENSMZEG00005011982) #21 pck2 (ENSMZEG00005011991) #22 Eastern happy MODERN SPECIES 21 zgc:165532 (ENSACLG00000015893) rgs9bp (ENSACLG00000015921) zgc:56231 (ENSACLG00000015944) pomp (ENSACLG00000015996) #8 C11orf65 (ENSACLG00000016042) #10 ENSACLG00000016074 #11 smyhc1 (ENSACLG00000016113) #12 ENSACLG00000016279 #13 ENSACLG00000016282 #14 ngdn (ENSACLG00000016289) #15 pabpn1 (ENSACLG00000016374) #16 thtpa (ENSACLG00000016541) #18 dcaf11 (ENSACLG00000016571) #19 ENSACLG00000016677 #20 psme1 (ENSACLG00000016690) #21 pck2 (ENSACLG00000016831) #22 ENSACLG00000019395 fen1 (ENSACLG00000019405) #24 tm9sf1 (ENSACLG00000019468) #26 ENSACLG00000019545 ENSACLG00000019557 ENSACLG00000019582 ENSACLG00000019674 ENSACLG00000019684 ENSACLG00000019689 ENSACLG00000019706 ENSACLG00000019729 ENSACLG00000019734 IPO4 (ENSACLG00000019742) #28 si:ch211-196f5.2 (ENSACLG00000019806) #29 rec8b (ENSACLG00000019830) #30 P. nyererei MODERN SPECIES 445 zgc:165532 (ENSPNYG00000013522) zgc:56231 (ENSPNYG00000013486) pomp (ENSPNYG00000013453) #8 C11orf65 (ENSPNYG00000013425) #10 RAMP3 (ENSPNYG00000013395) #11 smyhc1 (ENSPNYG00000013319) #12 ENSPNYG00000013244 #13 ENSPNYG00000013207 #14 ngdn (ENSPNYG00000013193) #15 pabpn1 (ENSPNYG00000013182) #16 ENSPNYG00000013169 #17 thtpa (ENSPNYG00000013137) #18 dcaf11 (ENSPNYG00000013112) #19 FITM1 (ENSPNYG00000013103) #20 psme1 (ENSPNYG00000013040) #21 pck2 (ENSPNYG00000012998) #22 Lyretail cichlid MODERN SPECIES 586 pomp (ENSNBRG00000024002) #8 C11orf65 (ENSNBRG00000023998) #10 RAMP3 (ENSNBRG00000023988) #11 smyhc1 (ENSNBRG00000023981) #12 SLC22A17 (ENSNBRG00000023976) #13 ENSNBRG00000023972 ENSNBRG00000023968 #14 ngdn (ENSNBRG00000023962) #15 pabpn1 (ENSNBRG00000023955) #16 ENSNBRG00000023950 thtpa (ENSNBRG00000023945) #18 dcaf11 (ENSNBRG00000023938) #19 FITM1 (ENSNBRG00000023935) #20 psme1 (ENSNBRG00000023931) #21 pck2 (ENSNBRG00000023927) #22 Nile tilapia MODERN SPECIES 21 ENSONIG00000041120 pomp (ENSONIG00000042065) #8 C11orf65 (ENSONIG00000008084) #10 RAMP3 (ENSONIG00000042166) #11 smyhc1 (ENSONIG00000008086) #12 ENSONIG00000034524 SLC22A17 (ENSONIG00000008102) #13 ngdn (ENSONIG00000008106) #15 ENSONIG00000027968 #14 pabpn1 (ENSONIG00000008112) #16 ENSONIG00000035580 #17 thtpa (ENSONIG00000035646) #18 dcaf11 (ENSONIG00000008114) #19 ENSONIG00000027305 #20 psme1 (ENSONIG00000008121) #21 pck2 (ENSONIG00000008131) #22 ENSONIG00000030857 ENSONIG00000003572 ENSONIG00000029992 snx16 (ENSONIG00000003585) ASIP2 (ENSONIG00000029778) WWP1 (ENSONIG00000003591) rmdn1 (ENSONIG00000003606) cpne3 (ENSONIG00000003611) cpne3 (ENSONIG00000003616) cpne3 (ENSONIG00000003619) idi1 (ENSONIG00000028842) wdr37 (ENSONIG00000003633) ADARB2 (ENSONIG00000003634) PFKP (ENSONIG00000003640) klf6a (ENSONIG00000041764) Midas cichlid MODERN SPECIES 90 NSMAF (ENSACIG00000021322) ENSACIG00000021368 ENSACIG00000021410 MMP16 (ENSACIG00000021506) #7 pomp (ENSACIG00000021568) #8 ENSACIG00000021583 #11 smyhc1 (ENSACIG00000021595) #12 ENSACIG00000021651 #13 ngdn (ENSACIG00000021676) #15 ENSACIG00000021731 #14 pabpn1 (ENSACIG00000021744) #16 thtpa (ENSACIG00000021782) #18 dcaf11 (ENSACIG00000021796) #19 ENSACIG00000021823 #20 psme1 (ENSACIG00000021829) #21 pck2 (ENSACIG00000021847) #22 Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Oryzias ANCESTRAL SPECIES 18 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00950000183116.b.a.b.a.d ENSGT00980000198805 ENSGT00940000167286 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Indian medaka MODERN SPECIES 14 MMP16 (ENSOMEG00000016834) #7 pomp (ENSOMEG00000016772) #8 RAMP3 (ENSOMEG00000000421) #11 ENSOMEG00000016736 ENSOMEG00000016725 #12 ENSOMEG00000016699 #12 SLC22A17 (ENSOMEG00000001013) #13 ENSOMEG00000016633 #14 pabpn1 (ENSOMEG00000016618) #16 ngdn (ENSOMEG00000016586) #15 ENSOMEG00000016546 #17 thtpa (ENSOMEG00000016525) #18 dcaf11 (ENSOMEG00000016508) #19 ENSOMEG00000016464 #20 psme1 (ENSOMEG00000016442) #21 pck2 (ENSOMEG00000016370) #22 ENSOMEG00000016336 #25 fen1 (ENSOMEG00000016314) #24 tm9sf1 (ENSOMEG00000016274) #26 nanog (ENSOMEG00000016255) #27 IPO4 (ENSOMEG00000016203) #28 si:ch211-196f5.2 (ENSOMEG00000016082) #29 rec8b (ENSOMEG00000016058) #30 pdcd6 (ENSOMEG00000001050) #31 zgc:101569 (ENSOMEG00000015975) #32 bmp6 (ENSOMEG00000015937) #33 txndc5 (ENSOMEG00000015910) #34 bloc1s5 (ENSOMEG00000015871) #35 EEF1E1 (ENSOMEG00000015854) #36 slc35b3 (ENSOMEG00000015829) #37 ENSOMEG00000015766 Javanese ricefish MODERN SPECIES 12 ENSOJAG00000012914 MMP16 (ENSOJAG00000012760) #7 pomp (ENSOJAG00000012700) #8 ENSOJAG00000012679 #11 ENSOJAG00000012655 smyhc3 (ENSOJAG00000012272) #12 SLC22A17 (ENSOJAG00000012256) #13 ENSOJAG00000012234 #14 ngdn (ENSOJAG00000012181) #15 pabpn1 (ENSOJAG00000012152) #16 ENSOJAG00000012130 #17 thtpa (ENSOJAG00000012099) #18 dcaf11 (ENSOJAG00000011521) #19 FITM1 (ENSOJAG00000011477) #20 psme1 (ENSOJAG00000011463) #21 pck2 (ENSOJAG00000010892) #22 ENSOJAG00000010819 #25 fen1 (ENSOJAG00000010782) #24 tm9sf1 (ENSOJAG00000010479) #26 nanog (ENSOJAG00000010442) #27 ENSOJAG00000010270 #28 si:ch211-196f5.2 (ENSOJAG00000010213) #29 rec8b (ENSOJAG00000010201) #30 pdcd6 (ENSOJAG00000010155) #31 zgc:101569 (ENSOJAG00000010149) #32 bmp6 (ENSOJAG00000010131) #33 txndc5 (ENSOJAG00000010119) #34 bloc1s5 (ENSOJAG00000010116) #35 EEF1E1 (ENSOJAG00000010109) #36 slc35b3 (ENSOJAG00000009949) #37 ENSOJAG00000009738 Oryzias_a ANCESTRAL SPECIES 16 ENSGT00940000154824.g.a ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000167286 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT01100000263571.i.b #23 ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Japanese Medaka HdrR MODERN SPECIES 12 ENSORLG00000022415 mmp16 (ENSORLG00000005969) #7 pomp (ENSORLG00000005994) #8 RAMP3 (ENSORLG00000026219) #11 ENSORLG00000023005 #12 ENSORLG00000028320 SLC22A17 (ENSORLG00000006113) #13 ENSORLG00000029221 #14 ngdn (ENSORLG00000006124) #15 pabpn1 (ENSORLG00000027900) #16 ENSORLG00000023291 #17 thtpa (ENSORLG00000006150) #18 dcaf11 (ENSORLG00000006203) #19 ENSORLG00000022978 #20 psme1 (ENSORLG00000006240) #21 pck2 (ENSORLG00000006281) #22 ENSORLG00000027432 #23 ENSORLG00000022683 ENSORLG00000026722 #25 fen1 (ENSORLG00000006361) #24 ENSORLG00000028725 ENSORLG00000024426 ENSORLG00000026458 ENSORLG00000023583 #25 tm9sf1 (ENSORLG00000006381) #26 nanog (ENSORLG00000021986) #27 IPO4 (ENSORLG00000006457) #28 si:ch211-196f5.2 (ENSORLG00000006466) #29 rec8b (ENSORLG00000026539) #30 pdcd6 (ENSORLG00000006481) #31 zgc:101569 (ENSORLG00000028113) #32 Chinese medaka MODERN SPECIES 511 fam168b (ENSOSIG00000022033) ENSOSIG00000022040 ENSOSIG00000022050 NSMAF (ENSOSIG00000022066) ENSOSIG00000022083 MMP16 (ENSOSIG00000022170) #7 pomp (ENSOSIG00000022186) #8 RAMP3 (ENSOSIG00000022188) #11 ENSOSIG00000022282 #14 ngdn (ENSOSIG00000022286) #15 pabpn1 (ENSOSIG00000022292) #16 ENSOSIG00000022295 #17 dcaf11 (ENSOSIG00000022332) #19 ENSOSIG00000022508 #20 psme1 (ENSOSIG00000022529) #21 pck2 (ENSOSIG00000022551) #22 Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Aplocheiloidei ANCESTRAL SPECIES 70 ENSGT00940000154824.g.a ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00670000098076 #27 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 Mangrove rivulus MODERN SPECIES 172 NSMAF (ENSKMAG00000017674) ENSKMAG00000017883 ENSKMAG00000018454 ENSKMAG00000018491 #7 pomp (ENSKMAG00000018584) #8 ENSKMAG00000018603 #10 ENSKMAG00000018642 #11 SLC22A17 (ENSKMAG00000018659) #13 ENSKMAG00000018708 #14 ngdn (ENSKMAG00000018719) #15 pabpn1 (ENSKMAG00000018748) #16 ENSKMAG00000018780 #17 thtpa (ENSKMAG00000018792) #18 dcaf11 (ENSKMAG00000018838) #19 psme1 (ENSKMAG00000018894) #21 pck2 (ENSKMAG00000018918) #22 ENSKMAG00000018963 b2ml (ENSKMAG00000019002) Turquoise killifish MODERN SPECIES 1617 CABZ01029422.1 (ENSNFUG00015004353) #7 ENSNFUG00015004370 pomp (ENSNFUG00015004376) #8 ENSNFUG00015004385 RAMP3 (ENSNFUG00015004388) #11 ENSNFUG00015004393 #13 ENSNFUG00015004397 #14 NGDN (ENSNFUG00015004398) #15 pabpn1 (ENSNFUG00015004410) #16 ENSNFUG00015004419 #17 thtpa (ENSNFUG00015004423) #18 dcaf11 (ENSNFUG00015004443) #19 FITM1 (ENSNFUG00015004467) #20 psme1 (ENSNFUG00015004472) #21 ENSNFUG00015004483 pck2 (ENSNFUG00015004490) #22 B2M (ENSNFUG00015004528) FEN1 (ENSNFUG00015004542) #24 ENSNFUG00015004562 #25 TM9SF1 (ENSNFUG00015004566) #26 nanog (ENSNFUG00015004574) #27 IPO4 (ENSNFUG00015004585) #28 si:ch211-196f5.2 (ENSNFUG00015004700) #29 rec8b (ENSNFUG00015004710) #30 PDCD6 (ENSNFUG00015004719) #31 ECHDC3 (ENSNFUG00015004733) #32 BMP6 (ENSNFUG00015004744) #33 txndc5 (ENSNFUG00015004822) #34 coq9 (ENSNFUG00015005073) ENSNFUG00015005096 ENSNFUG00015005209 Cyprinodontoidei ANCESTRAL SPECIES 25 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768 #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Poeciliinae ANCESTRAL SPECIES 20 ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768.i #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Poecilia ANCESTRAL SPECIES 17 ENSGT00940000154824.g.b ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00390000011379 #30 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768.i #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 Guppy MODERN SPECIES 451 ENSPREG00000010785 MMP16 (ENSPREG00000010826) #7 pomp (ENSPREG00000010884) #8 ENSPREG00000010930 #10 RAMP3 (ENSPREG00000010977) #11 smyhc1 (ENSPREG00000011013) #12 SLC22A17 (ENSPREG00000011163) #13 ENSPREG00000011174 #14 ngdn (ENSPREG00000011208) #15 pabpn1 (ENSPREG00000011278) #16 ENSPREG00000011367 thtpa (ENSPREG00000011379) #18 dcaf11 (ENSPREG00000011389) #19 FITM1 (ENSPREG00000011430) #20 psme1 (ENSPREG00000011462) #21 pck2 (ENSPREG00000011498) #22 ENSPREG00000011526 ENSPREG00000011545 ENSPREG00000011555 ENSPREG00000011562 vstm2a (ENSPREG00000011586) ENSPREG00000011602 ENSPREG00000011624 ENSPREG00000011635 ENSPREG00000011639 ENSPREG00000011652 ENSPREG00000011665 ENSPREG00000011674 ENSPREG00000011715 ift74 (ENSPREG00000011757) ENSPREG00000011825 NAME_6 ANCESTRAL SPECIES 194 ENSGT00940000161026 #11 ENSGT00940000154805.b.g.e.a.k #12 ENSGT00940000154805.b.g.e.a.l #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 ENSGT00940000165013.b.b ENSGT00940000175338 #25 ENSGT00940000155807.a #24 ENSGT00940000158667 #26 ENSGT00520000059940 ENSGT00550000075074 #28 ENSGT00400000023815 #29 ENSGT00940000160982 #31 ENSGT00940000165685 #32 ENSGT00940000158768.i #33 ENSGT00940000156920 #34 ENSGT00390000016974 #35 ENSGT00390000003564 #36 ENSGT00940000157040 #37 ENSGT00940000163681 Sailfin molly MODERN SPECIES 1497 smyhc1 (ENSPLAG00000022648) #12 SLC22A17 (ENSPLAG00000022660) #13 ENSPLAG00000022678 #14 ngdn (ENSPLAG00000022684) #15 pabpn1 (ENSPLAG00000022696) #16 ENSPLAG00000022717 thtpa (ENSPLAG00000022730) #18 dcaf11 (ENSPLAG00000022790) #19 FITM1 (ENSPLAG00000022808) #20 psme1 (ENSPLAG00000022820) #21 pck2 (ENSPLAG00000022856) #22 Amazon molly MODERN SPECIES 276 RAMP3 (ENSPFOG00000011986) #11 ENSPFOG00000021670 MYH6 (ENSPFOG00000011575) #12 ENSPFOG00000024228 MYH6 (ENSPFOG00000010779) #12 SLC22A17 (ENSPFOG00000010557) #13 ENSPFOG00000010544 #14 ngdn (ENSPFOG00000010423) #15 pabpn1 (ENSPFOG00000010351) #16 ENSPFOG00000010344 #17 thtpa (ENSPFOG00000010327) #18 dcaf11 (ENSPFOG00000010161) #19 ENSPFOG00000010155 #20 psme1 (ENSPFOG00000010050) #21 pck2 (ENSPFOG00000009876) #22 ENSPFOG00000024089 #23 ENSPFOG00000009849 #23 ENSPFOG00000022522 #23 ENSPFOG00000024022 #23 b2m (ENSPFOG00000009840) ENSPFOG00000009823 #23 ENSPFOG00000022261 fen1 (ENSPFOG00000009729) #24 tm9sf1 (ENSPFOG00000023234) #26 ENSPFOG00000009708 IPO4 (ENSPFOG00000009255) #28 ENSPFOG00000009178 pdcd6 (ENSPFOG00000009130) #31 zgc:101569 (ENSPFOG00000009097) #32 bmp6 (ENSPFOG00000008950) #33 Platyfish MODERN SPECIES 13 MMP16 (ENSXMAG00000027646) #7 pomp (ENSXMAG00000006295) #8 ENSXMAG00000025557 #10 ENSXMAG00000027202 #10 RAMP3 (ENSXMAG00000025320) #11 smyhc1 (ENSXMAG00000029326) #12 SLC22A17 (ENSXMAG00000022456) #13 ENSXMAG00000025808 #14 ngdn (ENSXMAG00000006206) #15 pabpn1 (ENSXMAG00000006196) #16 ENSXMAG00000006194 #17 thtpa (ENSXMAG00000023381) #18 dcaf11 (ENSXMAG00000006174) #19 FITM1 (ENSXMAG00000006172) #20 psme1 (ENSXMAG00000022144) #21 pck2 (ENSXMAG00000006128) #22 ENSXMAG00000006127 b2m (ENSXMAG00000006124) ENSXMAG00000027200 #25 fen1 (ENSXMAG00000006103) #24 tm9sf1 (ENSXMAG00000006090) #26 ENSXMAG00000006084 IPO4 (ENSXMAG00000006041) #28 si:ch211-196f5.2 (ENSXMAG00000006039) #29 pdcd6 (ENSXMAG00000025368) #31 zgc:101569 (ENSXMAG00000006020) #32 bmp6 (ENSXMAG00000006011) #33 txndc5 (ENSXMAG00000005999) #34 bloc1s5 (ENSXMAG00000027299) #35 EEF1E1 (ENSXMAG00000005992) #36 ENSXMAG00000025553 NAME_4 ANCESTRAL SPECIES 79 ENSGT00940000157532.a #7 ENSGT00390000010734 #8 ENSGT00510000048394 #10 ENSGT00940000161026 #11 ENSGT01060000248931 ENSGT00940000154805.b.g.e.a #12 ENSGT00940000160959 #13 ENSGT00940000167861 #14 ENSGT00500000044922 #15 ENSGT00940000154606 #16 ENSGT00940000160537 #17 ENSGT00390000005996 #18 ENSGT00720000108873 #19 ENSGT00530000063693.a.b #20 ENSGT00950000183098.b.a.a #21 ENSGT00390000001912.e #22 Sheepshead minnow MODERN SPECIES 1636 ENSCVAG00000003032 #20 psme1 (ENSCVAG00000003003) #21 pck2 (ENSCVAG00000002997) #22 Mummichog MODERN SPECIES 538 RAMP3 (ENSFHEG00000006988) #11 ENSFHEG00000007000 smyhc1 (ENSFHEG00000007152) #12 SLC22A17 (ENSFHEG00000007184) #13 cebp1 (ENSFHEG00000007196) #14 ngdn (ENSFHEG00000007207) #15 pabpn1 (ENSFHEG00000007215) #16 ENSFHEG00000007223 #17 thtpa (ENSFHEG00000007234) #18 dcaf11 (ENSFHEG00000007285) #19 FITM1 (ENSFHEG00000007295) #20 psme1 (ENSFHEG00000007306) #21 pck2 (ENSFHEG00000007333) #22