Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 251 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00390000010440 ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000165535 Clupeocephala ANCESTRAL SPECIES 13 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00940000156993.c Euteleosteomorpha ANCESTRAL SPECIES 73 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Acanthomorphata ANCESTRAL SPECIES 60 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00940000154268.k.b #22 ENSGT00940000154376.a.b #24 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183046.a.b.k #21 ENSGT00950000182883.a.a.b #25 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 Eupercaria ANCESTRAL SPECIES 10 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00710000106813.B.b ENSGT00940000182154 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b.s ##30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Gilthead seabream MODERN SPECIES 12 PAQR4 (ENSSAUG00010025708) #7 ENSSAUG00010025713 #8 TGFB1I1 (ENSSAUG00010025718) #9 ELOB (ENSSAUG00010025733) #10 pkmyt1 (ENSSAUG00010025735) #11 ENSSAUG00010025736 #12 ENSSAUG00010025738 #13 mylpfb (ENSSAUG00010025741) #14 pgap3 (ENSSAUG00010025745) #15 erbb2 (ENSSAUG00010025759) #16 KCNH2 (ENSSAUG00010025877) #17 TACO1 (ENSSAUG00010025878) #18 pth3r (ENSSAUG00010025885) #19 rundc3ab (ENSSAUG00010025979) #20 ENSSAUG00010025982 #21 ndufa4b (ENSSAUG00010025985) #22 ENSSAUG00010002622 #23 SPOP (ENSSAUG00010002640) #24 ENSSAUG00010002657 #25 ENSSAUG00010002661 #26 ENSSAUG00010002688 #27 ENSSAUG00010002757 #28 ENSSAUG00010002971 #29 ENSSAUG00010002990 #30 ENSSAUG00010003119 #31 ngfrb (ENSSAUG00010003121) #32 slc4a1b (ENSSAUG00010003202) #33 ENSSAUG00010004942 #34 atxn7l3b (ENSSAUG00010004946) #35 SMARCD2 (ENSSAUG00010004972) #36 psmc5 (ENSSAUG00010006373) #37 Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b.t.a #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b.s ##30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 European seabass MODERN SPECIES 11 ENSDLAG00005007289 #8 ENSDLAG00005007319 #9 ENSDLAG00005007498 #11 ENSDLAG00005007502 ENSDLAG00005026794 ENSDLAG00005007525 #14 pgap3 (ENSDLAG00005007633) #15 erbb2 (ENSDLAG00005007841) #16 ENSDLAG00005012196 ENSDLAG00005012200 #17 ENSDLAG00005012218 #18 pth3r (ENSDLAG00005012235) #19 rundc3ab (ENSDLAG00005012756) #20 ENSDLAG00005012843 #21 ENSDLAG00005013020 #25 ndufa4b (ENSDLAG00005012859) #22 ENSDLAG00005012916 #23 ENSDLAG00005013004 #24 ENSDLAG00005034472 #30 ENSDLAG00005013022 ##30 ENSDLAG00005029060 ENSDLAG00005013039 ENSDLAG00005003795 #29 ENSDLAG00005013082 ##30 ENSDLAG00005031240 ##30 ENSDLAG00005013164 #29 ngfrb (ENSDLAG00005013172) #32 slc4a1b (ENSDLAG00005013213) #33 SMARCD2 (ENSDLAG00005026806) #36 psmc5 (ENSDLAG00005014093) #37 ENSDLAG00005014419 Large yellow croaker MODERN SPECIES ENSLCRG00005016358 adad1 (ENSLCRG00005016359) tlx2 (ENSLCRG00005016361) npm1b (ENSLCRG00005016362) fgf24 (ENSLCRG00005016366) pcgf1 (ENSLCRG00005016372) lbx2 (ENSLCRG00005016380) nanos1 (ENSLCRG00005016382) ctsz (ENSLCRG00005016384) dcaf7 (ENSLCRG00005016386) KCNH2 (ENSLCRG00005016392) #17 TACO1 (ENSLCRG00005016394) #18 pth3r (ENSLCRG00005016399) #19 rundc3ab (ENSLCRG00005016409) #20 ENSLCRG00005016416 #21 ndufa4b (ENSLCRG00005016421) #22 ENSLCRG00005016422 #23 SPOP (ENSLCRG00005016426) #24 ENSLCRG00005016460 #25 ENSLCRG00005000066 #29 ENSLCRG00005000070 ##30 ENSLCRG00005000072 #29 ENSLCRG00005000076 ##30 RNF157 (ENSLCRG00005000115) srsf2a (ENSLCRG00005000152) st6galnac1.1 (ENSLCRG00005000155) ENSLCRG00005000162 st6galnac1.1 (ENSLCRG00005000168) olig2 (ENSLCRG00005000176) ENSLCRG00005000179 olig1 (ENSLCRG00005000184) Perciformes ANCESTRAL SPECIES 9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d Cottioidei ANCESTRAL SPECIES 12 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Stickleback MODERN SPECIES 5 PAQR4 (ENSGACG00000007239) #7 TGFB1I1 (ENSGACG00000007235) #9 ELOB (ENSGACG00000007227) #10 pkmyt1 (ENSGACG00000007222) #11 ENSGACG00000007220 ENSGACG00000007217 #13 mylpfb (ENSGACG00000007182) #14 pgap3 (ENSGACG00000007172) #15 erbb2 (ENSGACG00000007160) #16 dcaf7 (ENSGACG00000007116) ENSGACG00000007113 #17 TACO1 (ENSGACG00000007104) #18 pth3r (ENSGACG00000007096) #19 rundc3ab (ENSGACG00000007088) #20 fam117ab (ENSGACG00000007083) #21 ndufa4b (ENSGACG00000007080) #22 ENSGACG00000007076 ENSGACG00000007075 SPOP (ENSGACG00000007059) #24 NXPH3 (ENSGACG00000007057) #25 ENSGACG00000007050 #30 ngfrb (ENSGACG00000007042) #32 slc4a1b (ENSGACG00000007018) #33 ENSGACG00000007007 #34 atxn7l3b (ENSGACG00000007000) #35 SMARCD2 (ENSGACG00000006989) #36 psmc5 (ENSGACG00000006910) #37 MPP3 (ENSGACG00000006899) ENSGACG00000006895 ENSGACG00000006865 ENSGACG00000006864 Lumpfish MODERN SPECIES 10 TGFB1I1 (ENSCLMG00005003846) #9 ELOB (ENSCLMG00005003894) #10 pkmyt1 (ENSCLMG00005003898) #11 ENSCLMG00005003899 ENSCLMG00005003900 ENSCLMG00005003901 #13 mylpfb (ENSCLMG00005003903) #14 pgap3 (ENSCLMG00005003938) #15 erbb2 (ENSCLMG00005004004) #16 DCAF7 (ENSCLMG00005012678) ENSCLMG00005012680 #17 TACO1 (ENSCLMG00005012681) #18 pth3r (ENSCLMG00005012682) #19 rundc3ab (ENSCLMG00005012683) #20 fam117ab (ENSCLMG00005012685) #21 ndufa4b (ENSCLMG00005012686) #22 ENSCLMG00005012687 #23 SPOP (ENSCLMG00005012688) #24 ENSCLMG00005012689 #25 ngfrb (ENSCLMG00005012690) #32 slc4a1b (ENSCLMG00005012693) #33 ENSCLMG00005013911 #34 atxn7l3b (ENSCLMG00005013912) #35 SMARCD2 (ENSCLMG00005013932) #36 psmc5 (ENSCLMG00005015987) #37 MPP3 (ENSCLMG00005016020) ENSCLMG00005016031 ENSCLMG00005016074 ENSCLMG00005016076 ENSCLMG00005016078 ENSCLMG00005016106 Perciformes_a ANCESTRAL SPECIES 8 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Channel bull blenny MODERN SPECIES 10 pelo (ENSCGOG00000010254) PAQR4 (ENSCGOG00000010246) #7 TGFB1I1 (ENSCGOG00000010228) #9 ELOB (ENSCGOG00000010225) #10 pkmyt1 (ENSCGOG00000010224) #11 ENSCGOG00000010222 #13 mylpfb (ENSCGOG00000010095) #14 pgap3 (ENSCGOG00000010087) #15 erbb2 (ENSCGOG00000008638) #16 dcaf7 (ENSCGOG00000008523) ENSCGOG00000008519 #17 TACO1 (ENSCGOG00000008518) #18 pth3r (ENSCGOG00000008516) #19 rundc3ab (ENSCGOG00000019834) #20 ENSCGOG00000019830 #21 ndufa4b (ENSCGOG00000019827) #22 SPOP (ENSCGOG00000019771) #24 ENSCGOG00000019770 #25 ENSCGOG00000019769 #29 ENSCGOG00000019744 #30 ENSCGOG00000019737 #29 ENSCGOG00000019736 ENSCGOG00000019713 ##30 ENSCGOG00000019711 #29 ENSCGOG00000019690 ##30 ngfrb (ENSCGOG00000019685) #32 slc4a1b (ENSCGOG00000019646) #33 ENSCGOG00000019645 #34 atxn7l3b (ENSCGOG00000019642) #35 SMARCD2 (ENSCGOG00000018497) #36 psmc5 (ENSCGOG00000017692) #37 Pike perch MODERN SPECIES 3 TGFB1I1 (ENSSLUG00000020631) #9 ELOB (ENSSLUG00000020628) #10 pkmyt1 (ENSSLUG00000020626) #11 ENSSLUG00000020622 ENSSLUG00000020620 ENSSLUG00000020617 ENSSLUG00000020610 #13 pgap3 (ENSSLUG00000020593) #15 erbb2 (ENSSLUG00000011455) #16 dcaf7 (ENSSLUG00000011091) KCNH2 (ENSSLUG00000011040) #17 TACO1 (ENSSLUG00000011036) #18 pth3r (ENSSLUG00000010855) #19 rundc3ab (ENSSLUG00000010810) #20 ENSSLUG00000010795 #21 ndufa4b (ENSSLUG00000010789) #22 ENSSLUG00000010779 #23 SPOP (ENSSLUG00000010764) #24 ENSSLUG00000010757 #25 ENSSLUG00000010753 #30 ENSSLUG00000010747 #30 ENSSLUG00000010648 #29 ENSSLUG00000010624 #30 ngfrb (ENSSLUG00000010602) #32 slc4a1b (ENSSLUG00000010500) #33 ENSSLUG00000010468 atxn7l3b (ENSSLUG00000010460) #35 SMARCD2 (ENSSLUG00000008881) #36 psmc5 (ENSSLUG00000007878) #37 MPP3 (ENSSLUG00000007476) ENSSLUG00000007412 Ballan wrasse MODERN SPECIES 5 ENSLBEG00000022344 #8 TGFB1I1 (ENSLBEG00000022275) #9 ELOB (ENSLBEG00000022223) #10 pkmyt1 (ENSLBEG00000022199) #11 ENSLBEG00000022092 ENSLBEG00000022059 ENSLBEG00000022038 #13 mylpfb (ENSLBEG00000022011) #14 pgap3 (ENSLBEG00000021980) #15 erbb2 (ENSLBEG00000021858) #16 ENSLBEG00000021796 #17 TACO1 (ENSLBEG00000021786) #18 pth3r (ENSLBEG00000021706) #19 rundc3ab (ENSLBEG00000021683) #20 ENSLBEG00000021662 #21 ndufa4b (ENSLBEG00000021652) #22 ENSLBEG00000021626 #23 SPOP (ENSLBEG00000021598) #24 ENSLBEG00000021575 #25 ENSLBEG00000021511 #29 ENSLBEG00000021463 #30 ngfrb (ENSLBEG00000021441) #32 slc4a1b (ENSLBEG00000020948) #33 ENSLBEG00000020716 atxn7l3b (ENSLBEG00000020685) #35 SMARCD2 (ENSLBEG00000020464) #36 psmc5 (ENSLBEG00000020388) #37 MPP3 (ENSLBEG00000020280) ENSLBEG00000020229 ENSLBEG00000019672 ENSLBEG00000019580 Tetraodontidae ANCESTRAL SPECIES ENSGT00390000016326 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Tetraodon MODERN SPECIES 13 ppp1cab (ENSTNIG00000018938) pelo (ENSTNIG00000018937) PAQR4 (ENSTNIG00000000846) #7 TGFB1I1 (ENSTNIG00000018936) #9 ENSTNIG00000018935 #10 pkmyt1 (ENSTNIG00000018934) #11 ENSTNIG00000000722 #13 mylpfb (ENSTNIG00000000835) #14 pgap3 (ENSTNIG00000018933) #15 erbb2 (ENSTNIG00000018932) #16 KCNH2 (ENSTNIG00000018931) #17 TACO1 (ENSTNIG00000018930) #18 pth3r (ENSTNIG00000018929) #19 rundc3ab (ENSTNIG00000018928) #20 fam117ab (ENSTNIG00000018927) #21 ndufa4b (ENSTNIG00000018926) #22 SPOP (ENSTNIG00000018925) #24 ngfrb (ENSTNIG00000018924) #32 slc4a1b (ENSTNIG00000018923) #33 atxn7l3b (ENSTNIG00000018922) #35 SMARCD2 (ENSTNIG00000018921) #36 psmc5 (ENSTNIG00000018920) #37 MPP3 (ENSTNIG00000018919) ENSTNIG00000018918 ENSTNIG00000001290 znf281b (ENSTNIG00000018917) ENSTNIG00000018916 ENSTNIG00000018915 nmt1b (ENSTNIG00000018914) pcdh15b (ENSTNIG00000018912) plce1 (ENSTNIG00000018911) Fugu MODERN SPECIES PAQR4 (ENSTRUG00000005707) #7 ENSTRUG00000021798 ENSTRUG00000005647 #8 TGFB1I1 (ENSTRUG00000005520) #9 ENSTRUG00000021422 #10 pkmyt1 (ENSTRUG00000024878) #11 ENSTRUG00000024642 #13 mylpfb (ENSTRUG00000004965) #14 pgap3 (ENSTRUG00000004859) #15 erbb2 (ENSTRUG00000004330) #16 KCNH2 (ENSTRUG00000031535) #17 TACO1 (ENSTRUG00000004051) #18 pth3r (ENSTRUG00000002272) #19 rundc3ab (ENSTRUG00000001646) #20 fam117ab (ENSTRUG00000019601) #21 ndufa4b (ENSTRUG00000021066) #22 ENSTRUG00000019665 #23 SPOP (ENSTRUG00000001512) #24 ngfrb (ENSTRUG00000022461) #32 NXPH3 (ENSTRUG00000027658) #25 slc4a1b (ENSTRUG00000002827) #33 ENSTRUG00000022626 #34 atxn7l3b (ENSTRUG00000025133) #35 SMARCD2 (ENSTRUG00000005247) #36 psmc5 (ENSTRUG00000005619) #37 MPP3 (ENSTRUG00000005965) slc4a1b (ENSTRUG00000026909) #33 atxn7l3b (ENSTRUG00000030636) #35 SMARCD2 (ENSTRUG00000030431) #36 MPP3 (ENSTRUG00000026528) ENSTRUG00000006253 Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b Carangaria ANCESTRAL SPECIES 13 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00980000202790 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000156038.a.b.b.j ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Tongue sole MODERN SPECIES 18 plce1 (ENSCSEG00000006500) pcdh15b (ENSCSEG00000006467) ENSCSEG00000006459 ENSCSEG00000006445 ENSCSEG00000006443 znf281b (ENSCSEG00000006427) ENSCSEG00000006417 ENSCSEG00000006400 ENSCSEG00000006332 ENSCSEG00000006323 psmc5 (ENSCSEG00000006318) #37 SMARCD2 (ENSCSEG00000006246) #36 psmc5 (ENSCSEG00000006228) #37 SMARCD2 (ENSCSEG00000006220) #36 atxn7l3b (ENSCSEG00000006212) #35 ndufa4b (ENSCSEG00000006204) #22 ENSCSEG00000006199 #23 SPOP (ENSCSEG00000006193) #24 ENSCSEG00000006189 Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT01100000263491.a.a.c.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Barramundi perch MODERN SPECIES 525 dcaf7 (ENSLCAG00010014416) ENSLCAG00010014414 #17 TACO1 (ENSLCAG00010014413) #18 pth3r (ENSLCAG00010014411) #19 rundc3ab (ENSLCAG00010014409) #20 ENSLCAG00010014408 #21 ndufa4b (ENSLCAG00010014407) #22 ENSLCAG00010014403 #23 SPOP (ENSLCAG00010014399) #24 ENSLCAG00010014396 #25 ENSLCAG00010014395 #30 ENSLCAG00010014392 ##30 ENSLCAG00010014367 #29 ENSLCAG00010014361 #30 ENSLCAG00010014358 #30 ngfrb (ENSLCAG00010014352) #32 slc4a1b (ENSLCAG00010014348) #33 ENSLCAG00010014346 atxn7l3b (ENSLCAG00010014342) #35 ENSLCAG00010013976 #36 Seriola ANCESTRAL SPECIES 1 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Greater amberjack MODERN SPECIES 27 PAQR4 (ENSSDUG00000022934) #7 ENSSDUG00000022927 #8 TGFB1I1 (ENSSDUG00000022922) #9 ELOB (ENSSDUG00000022919) #10 pkmyt1 (ENSSDUG00000022916) #11 ENSSDUG00000022914 mylpfb (ENSSDUG00000022903) #14 pgap3 (ENSSDUG00000022901) #15 erbb2 (ENSSDUG00000022891) #16 dcaf7 (ENSSDUG00000022887) ENSSDUG00000022883 #17 TACO1 (ENSSDUG00000022880) #18 pth3r (ENSSDUG00000022857) #19 rundc3ab (ENSSDUG00000022848) #20 ENSSDUG00000022845 #21 ndufa4b (ENSSDUG00000022841) #22 ENSSDUG00000022836 #23 SPOP (ENSSDUG00000022832) #24 ENSSDUG00000022827 #25 ENSSDUG00000022823 #29 ENSSDUG00000022778 #30 ENSSDUG00000022766 #29 ENSSDUG00000022749 #30 ngfrb (ENSSDUG00000022748) #32 slc4a1b (ENSSDUG00000022741) #33 ENSSDUG00000022735 atxn7l3b (ENSSDUG00000022728) #35 SMARCD2 (ENSSDUG00000022719) #36 psmc5 (ENSSDUG00000022708) #37 MPP3 (ENSSDUG00000022679) ENSSDUG00000022655 Yellowtail amberjack MODERN SPECIES 2524 ENSSLDG00000017922 #8 TGFB1I1 (ENSSLDG00000017965) #9 ENSSLDG00000017998 #10 pkmyt1 (ENSSLDG00000018021) #11 ENSSLDG00000018033 ENSSLDG00000018048 #13 mylpfb (ENSSLDG00000018056) #14 pgap3 (ENSSLDG00000018066) #15 erbb2 (ENSSLDG00000018095) #16 dcaf7 (ENSSLDG00000018199) ENSSLDG00000018215 TACO1 (ENSSLDG00000018233) #18 pth3r (ENSSLDG00000018240) #19 rundc3ab (ENSSLDG00000018257) #20 ENSSLDG00000018289 #21 ndufa4b (ENSSLDG00000018301) #22 ENSSLDG00000018310 #23 SPOP (ENSSLDG00000018331) #24 ENSSLDG00000018345 #25 ENSSLDG00000018363 #30 ngfrb (ENSSLDG00000018405) #32 slc4a1b (ENSSLDG00000018419) #33 ENSSLDG00000018481 atxn7l3b (ENSSLDG00000018574) #35 SMARCD2 (ENSSLDG00000018584) #36 psmc5 (ENSSLDG00000018602) #37 MPP3 (ENSSLDG00000018653) Anabantaria ANCESTRAL SPECIES 18 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Zig-zag eel MODERN SPECIES 10 ENSMAMG00000013417 #9 ENSMAMG00000013438 #10 ENSMAMG00000013454 #11 ENSMAMG00000013466 ENSMAMG00000013484 ENSMAMG00000013488 #13 ENSMAMG00000013497 #14 pgap3 (ENSMAMG00000013504) #15 erbb2 (ENSMAMG00000013531) #16 ENSMAMG00000013636 ENSMAMG00000013656 ENSMAMG00000013684 #18 pth3r (ENSMAMG00000013726) #19 rundc3ab (ENSMAMG00000013812) #20 ENSMAMG00000013934 #21 ndufa4b (ENSMAMG00000013949) #22 ENSMAMG00000013961 #23 SPOP (ENSMAMG00000021915) #24 ENSMAMG00000013998 #25 ENSMAMG00000014020 #30 ngfrb (ENSMAMG00000014053) #32 slc4a1b (ENSMAMG00000014062) #33 ENSMAMG00000014097 #34 atxn7l3b (ENSMAMG00000014126) #35 ENSMAMG00000014154 #36 psmc5 (ENSMAMG00000014203) #37 ENSMAMG00000014251 ENSMAMG00000014304 ENSMAMG00000014486 znf281b (ENSMAMG00000014508) ENSMAMG00000014516 Anabantoidei ANCESTRAL SPECIES 10 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Siamese fighting fish MODERN SPECIES 9 PAQR4 (ENSBSLG00000018353) #7 ENSBSLG00000018382 #8 TGFB1I1 (ENSBSLG00000018442) #9 ELOB (ENSBSLG00000018487) #10 pkmyt1 (ENSBSLG00000018496) #11 ENSBSLG00000018505 ENSBSLG00000018512 ENSBSLG00000018515 #13 mylpfb (ENSBSLG00000004909) #14 pgap3 (ENSBSLG00000005006) #15 erbb2 (ENSBSLG00000005326) #16 ENSBSLG00000006169 #17 TACO1 (ENSBSLG00000006171) #18 rundc3ab (ENSBSLG00000006177) #20 fam117ab (ENSBSLG00000006227) #21 ndufa4b (ENSBSLG00000006230) #22 ENSBSLG00000006350 SPOP (ENSBSLG00000006511) #24 NXPH3 (ENSBSLG00000006615) #25 ngfrb (ENSBSLG00000006635) #32 slc4a1b (ENSBSLG00000006778) #33 ENSBSLG00000007745 #34 atxn7l3b (ENSBSLG00000007801) #35 SMARCD2 (ENSBSLG00000007933) #36 psmc5 (ENSBSLG00000008596) #37 MPP3 (ENSBSLG00000008760) muc13b (ENSBSLG00000008961) znf281b (ENSBSLG00000009071) ENSBSLG00000009085 ENSBSLG00000009158 nmt1b (ENSBSLG00000009590) Climbing perch MODERN SPECIES 10 ENSATEG00000019609 #9 ENSATEG00000019654 #10 ENSATEG00000019662 #11 ENSATEG00000019691 ENSATEG00000019706 ENSATEG00000019748 #13 ENSATEG00000019753 #14 ENSATEG00000019764 #15 ENSATEG00000019808 #16 ENSATEG00000019890 ENSATEG00000019921 #17 ENSATEG00000019980 #18 ENSATEG00000019992 #19 rundc3ab (ENSATEG00000020006) #20 ENSATEG00000025270 #21 ndufa4b (ENSATEG00000020044) #22 ENSATEG00000020061 #23 SPOP (ENSATEG00000020080) #24 ENSATEG00000020098 #25 ENSATEG00000020157 #30 ENSATEG00000020572 #29 ENSATEG00000020644 #30 ngfrb (ENSATEG00000020725) #32 slc4a1b (ENSATEG00000020739) #33 ENSATEG00000028197 atxn7l3b (ENSATEG00000020765) #35 ENSATEG00000020779 #36 psmc5 (ENSATEG00000020792) #37 ENSATEG00000020833 ENSATEG00000020855 znf281b (ENSATEG00000020866) Ovalentaria ANCESTRAL SPECIES 13 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.j ENSGT00940000157790.sb.a ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450.b #34 ENSGT00940000169450.a #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b Poeciliinae ANCESTRAL SPECIES 10 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450.b #34 ENSGT00940000169450.a #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.d Poecilia ANCESTRAL SPECIES 22 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000157790.sb.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000173105 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b.cb.a #30 ENSGT00940000164679.n.a.b #29 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00940000164679.n.b #29 ENSGT00950000183155.a.a.a.a.b.cb.b #30 ENSGT00940000156038.a.b.b.j ENSGT00940000164679.n.a.a #29 ENSGT00950000183155.a.a.a.a.b.bb #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450.b #34 NAME_6 ANCESTRAL SPECIES 137 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000173105 Sailfin molly MODERN SPECIES 3396 ENSPLAG00000018994 #21 ndufa4b (ENSPLAG00000018985) #22 Amazon molly MODERN SPECIES 558 PAQR4 (ENSPFOG00000007278) #7 ENSPFOG00000007305 #8 TGFB1I1 (ENSPFOG00000007368) #9 ELOB (ENSPFOG00000007452) #10 pkmyt1 (ENSPFOG00000007455) #11 ENSPFOG00000007510 ENSPFOG00000007521 #13 mylpfb (ENSPFOG00000007547) #14 pgap3 (ENSPFOG00000007591) #15 erbb2 (ENSPFOG00000007662) #16 KCNH2 (ENSPFOG00000007934) #17 TACO1 (ENSPFOG00000008051) #18 pth3r (ENSPFOG00000008090) #19 rundc3ab (ENSPFOG00000008349) #20 ENSPFOG00000023030 #21 ndufa4b (ENSPFOG00000008522) #22 ENSPFOG00000008524 Platyfish MODERN SPECIES 1 pelo (ENSXMAG00000018474) PAQR4 (ENSXMAG00000023650) #7 ENSXMAG00000018464 #8 TGFB1I1 (ENSXMAG00000018458) #9 ELOB (ENSXMAG00000018454) #10 pkmyt1 (ENSXMAG00000018446) #11 ENSXMAG00000024731 #13 mylpfb (ENSXMAG00000021883) #14 pgap3 (ENSXMAG00000026396) #15 erbb2 (ENSXMAG00000018390) #16 ENSXMAG00000018383 #17 TACO1 (ENSXMAG00000029575) #18 pth3r (ENSXMAG00000025154) #19 rundc3ab (ENSXMAG00000018332) #20 ENSXMAG00000018330 #21 ndufa4b (ENSXMAG00000018329) #22 ENSXMAG00000029816 #23 SPOP (ENSXMAG00000018312) #24 ENSXMAG00000024772 #25 ENSXMAG00000028846 ENSXMAG00000028139 #30 ENSXMAG00000029419 #29 ENSXMAG00000026541 #30 ENSXMAG00000023801 #29 ngfrb (ENSXMAG00000017049) #32 slc4a1b (ENSXMAG00000017002) #33 ENSXMAG00000016991 #34 ENSXMAG00000024453 #34 atxn7l3b (ENSXMAG00000016988) #35 SMARCD2 (ENSXMAG00000016961) #36 psmc5 (ENSXMAG00000016945) #37 NAME_4 ANCESTRAL SPECIES 15 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.j ENSGT00940000157790.sb.a ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000173105 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 Mummichog MODERN SPECIES 397 TGFB1I1 (ENSFHEG00000009650) #9 ELOB (ENSFHEG00000009631) #10 pkmyt1 (ENSFHEG00000009609) #11 ENSFHEG00000009606 ENSFHEG00000009599 #13 mylpfb (ENSFHEG00000009584) #14 pgap3 (ENSFHEG00000009553) #15 erbb2 (ENSFHEG00000009522) #16 erbb2 (ENSFHEG00000009288) #16 DCAF7 (ENSFHEG00000009224) KCNH6 (ENSFHEG00000009215) ENSFHEG00000009201 #18 pth3r (ENSFHEG00000009189) #19 rundc3ab (ENSFHEG00000009117) #20 ENSFHEG00000008921 #21 ndufa4b (ENSFHEG00000008915) #22 ENSFHEG00000008887 #23 ENSFHEG00000008833 #24 ENSFHEG00000008805 #25 Sheepshead minnow MODERN SPECIES 240 ELOB (ENSCVAG00000005500) #10 pkmyt1 (ENSCVAG00000005491) #11 ENSCVAG00000005485 mylpfb (ENSCVAG00000005476) #14 ENSCVAG00000000988 #13 pgap3 (ENSCVAG00000005452) #15 erbb2 (ENSCVAG00000005423) #16 ENSCVAG00000005403 dcaf7 (ENSCVAG00000000155) ENSCVAG00000005374 #17 TACO1 (ENSCVAG00000005360) #18 pth3r (ENSCVAG00000005352) #19 rundc3ab (ENSCVAG00000005322) #20 ENSCVAG00000000933 #21 ndufa4b (ENSCVAG00000005279) #22 ENSCVAG00000005267 ext2 (ENSCVAG00000005242) ALX4 (ENSCVAG00000005157) caprin1a (ENSCVAG00000005129) nucb2a (ENSCVAG00000005024) PLEKHA7 (ENSCVAG00000005004) sox6 (ENSCVAG00000004943) ENSCVAG00000004905 CYP2R1 (ENSCVAG00000004875) PDE3B (ENSCVAG00000004812) copb1 (ENSCVAG00000000142) rras2 (ENSCVAG00000004694) TUB (ENSCVAG00000004646) ENSCVAG00000004626 lmo1 (ENSCVAG00000004614) Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000164679 #29 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Mangrove rivulus MODERN SPECIES 4 PAQR4 (ENSKMAG00000021290) #7 ENSKMAG00000021275 #8 TGFB1I1 (ENSKMAG00000021260) #9 ELOB (ENSKMAG00000021249) #10 pkmyt1 (ENSKMAG00000021235) #11 ENSKMAG00000021227 ENSKMAG00000021219 #13 mylpfb (ENSKMAG00000021210) #14 pgap3 (ENSKMAG00000021195) #15 erbb2 (ENSKMAG00000021178) #16 ENSKMAG00000021161 TACO1 (ENSKMAG00000021152) #18 pth3r (ENSKMAG00000021140) #19 rundc3ab (ENSKMAG00000021114) #20 ENSKMAG00000021098 #21 ndufa4b (ENSKMAG00000021090) #22 ENSKMAG00000021077 #23 ENSKMAG00000021068 SPOP (ENSKMAG00000021057) #24 NXPH3 (ENSKMAG00000021048) #25 ENSKMAG00000021044 #29 ENSKMAG00000021031 #29 ENSKMAG00000021018 ENSKMAG00000021005 #29 ENSKMAG00000020995 #29 ENSKMAG00000020976 #29 ENSKMAG00000020959 #29 ENSKMAG00000020942 #30 ENSKMAG00000020868 #30 ngfrb (ENSKMAG00000020839) #32 slc4a1b (ENSKMAG00000020820) #33 Turquoise killifish MODERN SPECIES 1621 ENSNFUG00015018803 ENSNFUG00015018844 MPP3 (ENSNFUG00015018854) PSMC5 (ENSNFUG00015018990) #37 SMARCD2 (ENSNFUG00015019172) #36 atxn7l3b (ENSNFUG00015020980) #35 slc4a1b (ENSNFUG00015021007) #33 NGFR (ENSNFUG00015021859) #32 ENSNFUG00015021861 ENSNFUG00015021864 ENSNFUG00015021881 #29 NXPH4 (ENSNFUG00015021883) #25 SPOP (ENSNFUG00015021887) #24 RAP2IP (ENSNFUG00015021901) #20 ENSNFUG00015021999 #21 NDUFA4 (ENSNFUG00015022001) #22 ENSNFUG00015022004 #23 pth3r (ENSNFUG00015022023) #19 TACO1 (ENSNFUG00015022273) #18 ENSNFUG00015022275 DCAF7 (ENSNFUG00015022279) ERBB2 (ENSNFUG00015022315) #16 ENSNFUG00015023037 PGAP3 (ENSNFUG00015023043) #15 mylpfb (ENSNFUG00015023064) #14 ENSNFUG00015023071 OLA.27416 (ENSNFUG00015023073) #13 PKMYT1 (ENSNFUG00015023077) #11 ELOB (ENSNFUG00015023079) #10 TGFB1I1 (ENSNFUG00015023082) #9 ENSNFUG00015023086 Oryzias ANCESTRAL SPECIES 11 ENSGT00390000016326 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.r.a.a #29 ENSGT00950000183155.a.a.a.a.b.fb #30 ENSGT00940000164679.r.a.b.a #29 ENSGT00950000183155.a.a.a.a.b.gb #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000164512.d Oryzias_b ANCESTRAL SPECIES 9 ENSGT00390000016326 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b.fb #30 ENSGT00940000164679.r.a.b.a #29 ENSGT00950000183155.a.a.a.a.b.gb #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 Indian medaka MODERN SPECIES 17 PAQR4 (ENSOMEG00000021594) #7 ENSOMEG00000021628 #8 TGFB1I1 (ENSOMEG00000021704) #9 ELOB (ENSOMEG00000021737) #10 pkmyt1 (ENSOMEG00000021762) #11 ENSOMEG00000021769 ENSOMEG00000021785 #13 mylpfb (ENSOMEG00000021803) #14 pgap3 (ENSOMEG00000021848) #15 erbb2 (ENSOMEG00000021935) #16 ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) #18 pth3r (ENSOMEG00000022022) #19 rundc3ab (ENSOMEG00000022064) #20 ENSOMEG00000022080 #21 ndufa4b (ENSOMEG00000022090) #22 ENSOMEG00000022139 #23 SPOP (ENSOMEG00000022194) #24 ENSOMEG00000022203 #25 ENSOMEG00000022350 #30 ENSOMEG00000022399 #29 ENSOMEG00000022439 #29 ENSOMEG00000022458 #30 ENSOMEG00000022469 #30 ENSOMEG00000022482 #30 ENSOMEG00000022584 #30 ngfrb (ENSOMEG00000022613) #32 slc4a1b (ENSOMEG00000000599) #33 ENSOMEG00000022642 #34 atxn7l3b (ENSOMEG00000022658) #35 SMARCD2 (ENSOMEG00000022684) #36 Javanese ricefish MODERN SPECIES 10 pelo (ENSOJAG00000023604) PAQR4 (ENSOJAG00000023594) #7 ENSOJAG00000023589 #8 TGFB1I1 (ENSOJAG00000023561) #9 ELOB (ENSOJAG00000023551) #10 pkmyt1 (ENSOJAG00000023546) #11 ENSOJAG00000023542 #13 mylpfb (ENSOJAG00000023531) #14 pgap3 (ENSOJAG00000023525) #15 erbb2 (ENSOJAG00000022944) #16 kcnh2a (ENSOJAG00000022755) #17 TACO1 (ENSOJAG00000022744) #18 pth3r (ENSOJAG00000022691) #19 rundc3ab (ENSOJAG00000022673) #20 ENSOJAG00000022666 #21 ndufa4b (ENSOJAG00000022664) #22 ENSOJAG00000022662 #23 SPOP (ENSOJAG00000022636) #24 ENSOJAG00000022634 #25 ENSOJAG00000022630 ENSOJAG00000022623 ##30 ENSOJAG00000022610 #29 ENSOJAG00000022602 #29 ENSOJAG00000022581 #30 ENSOJAG00000022529 #30 ENSOJAG00000022507 #29 ENSOJAG00000022499 #30 ngfrb (ENSOJAG00000022492) #32 slc4a1b (ENSOJAG00000022453) #33 ENSOJAG00000022442 #34 atxn7l3b (ENSOJAG00000022437) #35 Oryzias_a ANCESTRAL SPECIES 17 ENSGT00390000016326 ENSGT00940000157978.b #7 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b.fb.b #30 ENSGT00940000164679.r.a.b.a #29 ENSGT00950000183155.a.a.a.a.b.fb.a.b #30 ENSGT00940000156038.a.b.b.j ENSGT00950000183155.a.a.a.a.b.gb #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d Chinese medaka MODERN SPECIES 1248 pelo (ENSOSIG00000014434) PAQR4 (ENSOSIG00000014439) #7 ENSOSIG00000014440 #8 TGFB1I1 (ENSOSIG00000014446) #9 ELOB (ENSOSIG00000014448) #10 pkmyt1 (ENSOSIG00000014449) #11 ENSOSIG00000014450 #13 mylpfb (ENSOSIG00000014452) #14 pgap3 (ENSOSIG00000014497) #15 erbb2 (ENSOSIG00000014515) #16 KCNH2 (ENSOSIG00000016332) #17 TACO1 (ENSOSIG00000016333) #18 pth3r (ENSOSIG00000016334) #19 rundc3ab (ENSOSIG00000016335) #20 ENSOSIG00000016336 #21 ndufa4b (ENSOSIG00000016339) #22 SPOP (ENSOSIG00000016343) #24 ENSOSIG00000016348 #29 Japanese Medaka HdrR MODERN SPECIES 10 ppp1cab (ENSORLG00000005854) pelo (ENSORLG00000005827) PAQR4 (ENSORLG00000005803) #7 ENSORLG00000005780 #8 TGFB1I1 (ENSORLG00000005775) #9 ELOB (ENSORLG00000030015) #10 pkmyt1 (ENSORLG00000005741) #11 ENSORLG00000005738 #13 pgap3 (ENSORLG00000005720) #15 erbb2 (ENSORLG00000005702) #16 ENSORLG00000005659 TACO1 (ENSORLG00000005652) #18 pth3r (ENSORLG00000005645) #19 rundc3ab (ENSORLG00000005637) #20 ENSORLG00000005608 #21 ndufa4b (ENSORLG00000025082) #22 ENSORLG00000005597 #23 SPOP (ENSORLG00000005591) #24 ENSORLG00000005557 #25 ENSORLG00000005533 #30 ENSORLG00000024647 ENSORLG00000022165 ENSORLG00000030359 ENSORLG00000022011 #30 ENSORLG00000028292 ngfrb (ENSORLG00000027270) #32 slc4a1b (ENSORLG00000005495) #33 ENSORLG00000005485 #34 atxn7l3b (ENSORLG00000005478) #35 SMARCD2 (ENSORLG00000005467) #36 psmc5 (ENSORLG00000005441) #37 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT00710000106813.B.b Cichlidae ANCESTRAL SPECIES 15 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000164679 #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT01030000235331 Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.t #29 ENSGT00950000183155.a.a.a.a.b.mb #30 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.a.b ##30 ENSGT00950000183155.a.a.a.a.b.lb #30 ENSGT00940000164679.s #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k.d #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.t #29 ENSGT00950000183155.a.a.a.a.b.mb #30 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb #30 ENSGT00940000164679.s #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d Haplochromini ANCESTRAL SPECIES 17 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841.e.b #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k.d #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.t #29 ENSGT00950000183155.a.a.a.a.b.mb #30 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb #30 ENSGT00940000164679.s #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d Burton s mouthbrooder MODERN SPECIES 810 ENSHBUG00000005929 #8 TGFB1I1 (ENSHBUG00000005958) #9 ENSHBUG00000005976 #10 pkmyt1 (ENSHBUG00000006044) #11 ENSHBUG00000006057 ENSHBUG00000006072 ENSHBUG00000006090 #13 mylpfb (ENSHBUG00000006128) #14 pgap3 (ENSHBUG00000006153) #15 erbb2 (ENSHBUG00000006177) #16 ENSHBUG00000006213 #17 TACO1 (ENSHBUG00000006221) #18 pth3r (ENSHBUG00000006384) #19 rundc3ab (ENSHBUG00000006419) #20 ENSHBUG00000006446 #21 ndufa4b (ENSHBUG00000006459) #22 ENSHBUG00000000749 #23 SPOP (ENSHBUG00000006480) #24 ENSHBUG00000006487 #25 Haplochromini_A ANCESTRAL SPECIES 16 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841.e.b #19 ENSGT00940000164841.e.a #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k.d #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.t #29 ENSGT00950000183155.a.a.a.a.b.mb #30 ENSGT01030000236274 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841.e.b #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k.d #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.t #29 ENSGT00950000183155.a.a.a.a.b.mb #30 ENSGT00530000064692.B.a.a.b.a.c.b.c.a ENSGT00950000183155.a.a.a.a.b.lb.a.a #30 ENSGT00940000164679.s.a #29 ENSGT00950000183155.a.a.a.a.b.lb.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 Eastern happy MODERN SPECIES 15 ENSACLG00000010326 #8 TGFB1I1 (ENSACLG00000010336) #9 ENSACLG00000010350 #10 pkmyt1 (ENSACLG00000010357) #11 ENSACLG00000010360 ENSACLG00000010373 #13 mylpfb (ENSACLG00000010379) #14 pgap3 (ENSACLG00000010390) #15 erbb2 (ENSACLG00000010392) #16 dcaf7 (ENSACLG00000010462) ENSACLG00000010527 #17 TACO1 (ENSACLG00000010544) #18 pth3r (ENSACLG00000010562) #19 rundc3ab (ENSACLG00000010574) #20 ENSACLG00000010599 #21 ndufa4b (ENSACLG00000010626) #22 ENSACLG00000010638 #23 SPOP (ENSACLG00000010661) #24 ENSACLG00000010676 #25 ENSACLG00000010778 #30 ENSACLG00000011265 ENSACLG00000011366 #30 ENSACLG00000011416 #29 ngfrb (ENSACLG00000011419) #32 slc4a1b (ENSACLG00000011432) #33 ENSACLG00000011456 atxn7l3b (ENSACLG00000011477) #35 SMARCD2 (ENSACLG00000011493) #36 psmc5 (ENSACLG00000011499) #37 MPP3 (ENSACLG00000011529) ENSACLG00000011619 Zebra mbuna MODERN SPECIES 1111 cep55l (ENSMZEG00005015154) ENSMZEG00005015110 ENSMZEG00005015102 ENSMZEG00005015032 MPP3 (ENSMZEG00005014985) psmc5 (ENSMZEG00005014956) #37 SMARCD2 (ENSMZEG00005014945) #36 atxn7l3b (ENSMZEG00005014933) #35 ENSMZEG00005014921 slc4a1b (ENSMZEG00005014912) #33 ngfrb (ENSMZEG00005014900) #32 pth3r (ENSMZEG00005014890) #19 rundc3ab (ENSMZEG00005014869) #20 ENSMZEG00005014858 ENSMZEG00005014848 #21 ndufa4b (ENSMZEG00005014842) #22 ENSMZEG00005014828 #23 SPOP (ENSMZEG00005014808) #24 ENSMZEG00005014797 #25 ENSMZEG00005014769 #30 ENSMZEG00005014744 ENSMZEG00005014730 #30 ENSMZEG00005014720 ENSMZEG00005014702 #30 ENSMZEG00005014693 #29 NXPH3 (ENSMZEG00005014690) #25 SPOP (ENSMZEG00005014681) #24 ENSMZEG00005014654 FAM117A (ENSMZEG00005014647) #21 rundc3ab (ENSMZEG00005014584) #20 pth3r (ENSMZEG00005014515) #19 P. nyererei MODERN SPECIES 535 pelo (ENSPNYG00000017325) PAQR4 (ENSPNYG00000017362) #7 ENSPNYG00000017381 #8 TGFB1I1 (ENSPNYG00000017436) #9 ENSPNYG00000017484 #10 pkmyt1 (ENSPNYG00000017506) #11 ENSPNYG00000017574 #13 mylpfb (ENSPNYG00000017583) #14 pgap3 (ENSPNYG00000017590) #15 erbb2 (ENSPNYG00000017639) #16 ENSPNYG00000017782 #17 TACO1 (ENSPNYG00000017801) #18 pth3r (ENSPNYG00000017830) #19 rundc3ab (ENSPNYG00000017950) #20 ENSPNYG00000018087 ndufa4b (ENSPNYG00000018094) #22 SPOP (ENSPNYG00000018135) #24 ENSPNYG00000018292 #25 Lyretail cichlid MODERN SPECIES 436 PAQR4 (ENSNBRG00000011793) #7 ENSNBRG00000011745 #8 TGFB1I1 (ENSNBRG00000011639) #9 ENSNBRG00000011604 #10 pkmyt1 (ENSNBRG00000011577) #11 ENSNBRG00000011566 ENSNBRG00000011548 #13 mylpfb (ENSNBRG00000011528) #14 pgap3 (ENSNBRG00000011491) #15 erbb2 (ENSNBRG00000011460) #16 ENSNBRG00000011139 TACO1 (ENSNBRG00000011026) #18 pth3r (ENSNBRG00000010880) #19 rundc3ab (ENSNBRG00000010786) #20 ENSNBRG00000010761 #21 ndufa4b (ENSNBRG00000010686) #22 ENSNBRG00000010666 #23 SPOP (ENSNBRG00000010651) #24 ENSNBRG00000010634 #25 ENSNBRG00000010597 ##30 ENSNBRG00000010570 #30 Nile tilapia MODERN SPECIES 20 ENSONIG00000011519 #8 TGFB1I1 (ENSONIG00000011521) #9 ENSONIG00000011524 #10 pkmyt1 (ENSONIG00000011527) #11 ENSONIG00000039985 ENSONIG00000011530 #13 mylpfb (ENSONIG00000011532) #14 pgap3 (ENSONIG00000011535) #15 erbb2 (ENSONIG00000011537) #16 dcaf7 (ENSONIG00000011567) ENSONIG00000011568 #17 TACO1 (ENSONIG00000011570) #18 pth3r (ENSONIG00000011572) #19 rundc3ab (ENSONIG00000011581) #20 ENSONIG00000011585 #21 ndufa4b (ENSONIG00000031058) #22 ENSONIG00000011586 #23 SPOP (ENSONIG00000011587) #24 ENSONIG00000011590 #25 ENSONIG00000027714 ##30 ENSONIG00000038239 #29 ENSONIG00000016477 #30 ENSONIG00000028852 #29 ngfrb (ENSONIG00000031781) #32 slc4a1b (ENSONIG00000016469) #33 ENSONIG00000016468 atxn7l3b (ENSONIG00000036417) #35 SMARCD2 (ENSONIG00000016465) #36 psmc5 (ENSONIG00000035978) #37 MPP3 (ENSONIG00000016460) ENSONIG00000016455 Midas cichlid MODERN SPECIES 71 PAQR4 (ENSACIG00000014371) #7 ENSACIG00000014355 #8 TGFB1I1 (ENSACIG00000014337) #9 ENSACIG00000014326 #10 pkmyt1 (ENSACIG00000014312) #11 ENSACIG00000014292 ENSACIG00000014280 #13 pgap3 (ENSACIG00000014254) #15 erbb2 (ENSACIG00000014118) #16 dcaf7 (ENSACIG00000014092) KCNH2 (ENSACIG00000014075) #17 TACO1 (ENSACIG00000014052) #18 pth3r (ENSACIG00000014009) #19 rundc3ab (ENSACIG00000013902) #20 ENSACIG00000013882 #21 ndufa4b (ENSACIG00000013800) #22 ENSACIG00000013788 #23 SPOP (ENSACIG00000013766) #24 ENSACIG00000013753 #25 ENSACIG00000013745 ##30 ENSACIG00000013730 #30 ENSACIG00000013714 #29 ENSACIG00000013697 #30 ngfrb (ENSACIG00000013690) #32 slc4a1b (ENSACIG00000013654) #33 atxn7l3b (ENSACIG00000013637) #35 SMARCD2 (ENSACIG00000013435) #36 psmc5 (ENSACIG00000013393) #37 MPP3 (ENSACIG00000013248) ENSACIG00000013220 ENSACIG00000013206 Pomacentridae ANCESTRAL SPECIES 13 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Pomacentridae_A ANCESTRAL SPECIES 11 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT00940000155158.q.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000164679 #29 ENSGT00940000177899 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000169450 #34 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d Amphiprion ANCESTRAL SPECIES 28 ENSGT00520000055649.b #8 ENSGT00940000160447 #9 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT00940000155158.q.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d #17 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00390000003044 #23 ENSGT00940000154376.a.b #24 ENSGT00950000182883.a.a.b #25 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00940000164679 #29 Clown anemonefish MODERN SPECIES 1665 ENSAOCG00000005624 #13 mylpfb (ENSAOCG00000005637) #14 pgap3 (ENSAOCG00000005663) #15 erbb2 (ENSAOCG00000005685) #16 dcaf7 (ENSAOCG00000005728) KCNH2 (ENSAOCG00000006042) #17 TACO1 (ENSAOCG00000006109) #18 pth3r (ENSAOCG00000006126) #19 rundc3ab (ENSAOCG00000002346) #20 ENSAOCG00000002203 #21 ndufa4b (ENSAOCG00000006205) #22 ENSAOCG00000006230 #23 SPOP (ENSAOCG00000006266) #24 NXPH3 (ENSAOCG00000000297) #25 ENSAOCG00000006427 #30 tmigd1 (ENSAOCG00000006460) ENSAOCG00000006480 cct8 (ENSAOCG00000006551) ENSAOCG00000006575 aldocb (ENSAOCG00000006588) pigs (ENSAOCG00000000331) srsf1b (ENSAOCG00000000337) dynll2b (ENSAOCG00000000341) ENSAOCG00000006775 heatr6 (ENSAOCG00000006882) ddx52 (ENSAOCG00000000356) Orange clownfish MODERN SPECIES 10 ENSAPEG00000011299 #8 TGFB1I1 (ENSAPEG00000011357) #9 ENSAPEG00000011413 ##10 pkmyt1 (ENSAPEG00000011438) #11 RHOG (ENSAPEG00000011455) ENSAPEG00000011559 #13 mylpfb (ENSAPEG00000011641) #14 pgap3 (ENSAPEG00000012807) #15 erbb2 (ENSAPEG00000012879) #16 dcaf7 (ENSAPEG00000012985) ENSAPEG00000013007 #17 TACO1 (ENSAPEG00000013022) #18 pth3r (ENSAPEG00000013042) #19 rundc3ab (ENSAPEG00000013139) #20 ENSAPEG00000013151 #21 ndufa4b (ENSAPEG00000013164) #22 ENSAPEG00000013182 #23 SPOP (ENSAPEG00000013194) #24 NXPH3 (ENSAPEG00000013244) #25 ENSAPEG00000013248 #30 ENSAPEG00000013269 #29 ENSAPEG00000013294 #30 QRFPR (ENSAPEG00000013309) polr3a (ENSAPEG00000013351) ZMIZ1 (ENSAPEG00000013474) PPIF (ENSAPEG00000013551) ZCCHC24 (ENSAPEG00000013587) ENSAPEG00000013594 DLG5 (ENSAPEG00000013628) KCNMA1 (ENSAPEG00000013824) ZNF503 (ENSAPEG00000014033) Spiny chromis MODERN SPECIES 402 ENSAPOG00000022988 #8 TGFB1I1 (ENSAPOG00000022933) #9 ELOB (ENSAPOG00000022871) #10 pkmyt1 (ENSAPOG00000022863) #11 ENSAPOG00000022850 ENSAPOG00000022804 #13 mylpfb (ENSAPOG00000022794) #14 pgap3 (ENSAPOG00000000649) #15 erbb2 (ENSAPOG00000022725) #16 dcaf7 (ENSAPOG00000022618) ENSAPOG00000022597 #17 TACO1 (ENSAPOG00000022562) #18 pth3r (ENSAPOG00000022539) #19 rundc3ab (ENSAPOG00000022350) #20 ENSAPOG00000022310 #21 ndufa4b (ENSAPOG00000022293) #22 ENSAPOG00000000633 #23 SPOP (ENSAPOG00000022249) #24 NXPH3 (ENSAPOG00000022238) #25 ENSAPOG00000022229 #29 ENSAPOG00000022210 ENSAPOG00000022201 #30 ngfrb (ENSAPOG00000022183) #32 slc4a1b (ENSAPOG00000022140) #33 ENSAPOG00000021727 #34 atxn7l3b (ENSAPOG00000021683) #35 SMARCD2 (ENSAPOG00000021653) #36 psmc5 (ENSAPOG00000021593) #37 Bicolor damselfish MODERN SPECIES 556 SLC45A4 (ENSSPAG00000015134) ENSSPAG00000015102 cfap20 (ENSSPAG00000015090) dgat1a (ENSSPAG00000015022) zgc:63863 (ENSSPAG00000014986) pgap3 (ENSSPAG00000014967) #15 erbb2 (ENSSPAG00000014915) #16 ENSSPAG00000014887 #17 TACO1 (ENSSPAG00000014875) #18 pth3r (ENSSPAG00000014705) #19 rundc3ab (ENSSPAG00000014585) #20 ENSSPAG00000014555 #21 ndufa4b (ENSSPAG00000014529) #22 ENSSPAG00000014509 #23 SPOP (ENSSPAG00000014477) #24 NXPH3 (ENSSPAG00000014470) #25 ENSSPAG00000014404 #30 ngfrb (ENSSPAG00000014389) #32 slc4a1b (ENSSPAG00000013930) #33 ENSSPAG00000013674 #34 atxn7l3b (ENSSPAG00000013652) #35 SMARCD2 (ENSSPAG00000013616) #36 psmc5 (ENSSPAG00000013577) #37 ENSSPAG00000013524 Tiger tail seahorse MODERN SPECIES 330 ENSHCOG00000017097 #13 mylpfb (ENSHCOG00000017125) #14 pgap3 (ENSHCOG00000017148) #15 erbb2 (ENSHCOG00000017162) #16 ENSHCOG00000017177 ENSHCOG00000017185 #18 pth3r (ENSHCOG00000017340) #19 rundc3ab (ENSHCOG00000017450) #20 ENSHCOG00000017461 ndufa4b (ENSHCOG00000017472) #22 ENSHCOG00000017481 #23 SPOP (ENSHCOG00000017490) #24 ngfrb (ENSHCOG00000017499) #32 slc4a1b (ENSHCOG00000017514) #33 atxn7l3b (ENSHCOG00000017531) #35 SMARCD2 (ENSHCOG00000017540) #36 psmc5 (ENSHCOG00000017546) #37 MPP3 (ENSHCOG00000017555) ENSHCOG00000017738 CAPN15 (ENSHCOG00000017804) MSS51 (ENSHCOG00000017813) cog7 (ENSHCOG00000017857) ENSHCOG00000017885 HS3ST6 (ENSHCOG00000017896) LRRC4B (ENSHCOG00000017914) Pinecone sodierfish MODERN SPECIES 10 ELOB (ENSMMDG00005024353) #10 pkmyt1 (ENSMMDG00005024351) #11 RHOG (ENSMMDG00005024350) ENSMMDG00005024349 ENSMMDG00005024348 ENSMMDG00005024346 #13 mylpfb (ENSMMDG00005024344) #14 pgap3 (ENSMMDG00005024338) #15 erbb2 (ENSMMDG00005024319) #16 dcaf7 (ENSMMDG00005024313) ENSMMDG00005024311 TACO1 (ENSMMDG00005024310) #18 pth3r (ENSMMDG00005024308) #19 rundc3ab (ENSMMDG00005024305) #20 ENSMMDG00005024304 #21 ndufa4b (ENSMMDG00005024302) #22 ENSMMDG00005024301 #23 SPOP (ENSMMDG00005024296) #24 ENSMMDG00005024292 #25 ENSMMDG00005024283 #30 ENSMMDG00005024271 ##30 ENSMMDG00005024265 #30 ngfrb (ENSMMDG00005024262) #32 slc4a1b (ENSMMDG00005024239) #33 ENSMMDG00005024237 atxn7l3b (ENSMMDG00005024235) #35 SMARCD2 (ENSMMDG00005024054) #36 psmc5 (ENSMMDG00005023958) #37 MPP3 (ENSMMDG00005023854) ENSMMDG00005023811 ENSMMDG00005023804 Cod MODERN SPECIES 9 ENSGMOG00000031818 ENSGMOG00000001605 ENSGMOG00000027670 ENSGMOG00000034461 ENSGMOG00000036498 ENSGMOG00000014387 ENSGMOG00000025596 map2k4b (ENSGMOG00000008589) adprm (ENSGMOG00000019361) ENSGMOG00000024566 ENSGMOG00000019360 ENSGMOG00000024505 #18 ENSGMOG00000019351 #19 ENSGMOG00000019347 ENSGMOG00000022721 ENSGMOG00000004451 #22 ENSGMOG00000028370 ENSGMOG00000036863 ENSGMOG00000018186 #24 ENSGMOG00000005140 #32 ENSGMOG00000025496 slc16a12b (ENSGMOG00000005222) PANK1 (ENSGMOG00000029465) ENSGMOG00000035176 rpp30 (ENSGMOG00000005379) ENSGMOG00000010461 ENSGMOG00000031214 ENSGMOG00000011719 ENSGMOG00000022630 ENSGMOG00000014001 ENSGMOG00000014033 Protacanthopterygii ANCESTRAL SPECIES 69 ENSGT00390000018316.a.e #10 ENSGT00940000159427 #11 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00940000154376.a.b #24 ENSGT00940000164679 #29 ENSGT00950000183155.a.a.a.a.b #30 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000167603 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361 ENSGT00940000164099.b Northern pike MODERN SPECIES 4 ENSELUG00000023244 #8 TGFB1I1 (ENSELUG00000023328) #9 pkmyt1 (ENSELUG00000023367) #11 ENSELUG00000000991 ENSELUG00000023405 #13 mylpfb (ENSELUG00000023430) #14 pgap3 (ENSELUG00000023501) #15 erbb2 (ENSELUG00000023565) #16 dcaf7 (ENSELUG00000023589) ENSELUG00000023610 ENSELUG00000023623 ENSELUG00000023640 #18 pth3r (ENSELUG00000023655) #19 rundc3ab (ENSELUG00000001556) #20 ENSELUG00000023781 #21 ndufa4b (ENSELUG00000001001) #22 SPOP (ENSELUG00000023946) #24 ENSELUG00000028413 #29 ENSELUG00000024005 #30 ngfrb (ENSELUG00000024059) #32 slc4a1b (ENSELUG00000001882) #33 ENSELUG00000001839 ATXN7L3 (ENSELUG00000032089) #35 SMARCD2 (ENSELUG00000001803) #36 psmc5 (ENSELUG00000001785) #37 MPP3 (ENSELUG00000004710) ENSELUG00000004836 muc13b (ENSELUG00000028180) znf281b (ENSELUG00000004876) ENSELUG00000004891 ENSELUG00000005007 Otomorpha ANCESTRAL SPECIES 45 ENSGT00570000079101.a.a ENSGT00390000011297 ENSGT00940000157795.g.a ENSGT00530000063627.b ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158253 #35 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00940000154352.A ENSGT00940000165576.b.b.b ENSGT01090000260005.a.b.a.a ENSGT00940000157539 ENSGT00940000164208 ENSGT00390000017328.a.b Otophysi ANCESTRAL SPECIES 82 ENSGT00390000011297 ENSGT00940000157795.g.a ENSGT00530000063627.b ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a.d.b ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT00940000164679.db #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00940000154352.A ENSGT00940000165576.b.b.b ENSGT01090000260005.a.b.a.a ENSGT00940000157539 ENSGT00940000160279.g ENSGT00390000016438 Characiphysae ANCESTRAL SPECIES 80 ENSGT00390000011297 ENSGT00940000157795.g.a ENSGT00530000063627.b ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304.c #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a.d.b ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT01060000248786.a ENSGT00940000164679.db #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00940000154352.A ENSGT00940000165576.a.b ENSGT00940000165576.b.b.b ENSGT01090000260005.a.b.a.a ENSGT00940000157539 Channel catfish MODERN SPECIES 4 adprh (ENSIPUG00000020384) adprh (ENSIPUG00000020338) DOC2A (ENSIPUG00000020318) sult1st6 (ENSIPUG00000020306) sult1st6 (ENSIPUG00000020293) ENSIPUG00000020287 ENSIPUG00000020285 ENSIPUG00000020270 #13 mylpfb (ENSIPUG00000020240) #14 pgap3 (ENSIPUG00000020224) #15 ERBB2 (ENSIPUG00000020034) #16 KCNH6 (ENSIPUG00000020019) ENSIPUG00000020014 #18 pth3r (ENSIPUG00000019944) #19 rundc3ab (ENSIPUG00000019926) #20 ndufa4b (ENSIPUG00000019890) #22 ENSIPUG00000017734 mki67 (ENSIPUG00000017711) tut1 (ENSIPUG00000017671) pyyb (ENSIPUG00000017640) mpp2b (ENSIPUG00000017578) psmc5 (ENSIPUG00000017518) #37 Smarcd2 (ENSIPUG00000017435) #36 atxn7l3b (ENSIPUG00000017418) #35 slc4a1b (ENSIPUG00000017400) #33 NGFR (ENSIPUG00000017383) #32 ENSIPUG00000017366 ENSIPUG00000017348 ENSIPUG00000017321 ENSIPUG00000017287 rfng (ENSIPUG00000017242) Characiphysae_b ANCESTRAL SPECIES 71 ENSGT00570000079101.a.a ENSGT00390000011297 ENSGT00940000157795.h ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304.c #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a.d.b ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT01060000248786.a ENSGT00940000164679.db #29 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00940000154352.A ENSGT00940000165576.a.b ENSGT00940000165576.b.b.b ENSGT01090000260005.a.b.a.a ENSGT00940000157539 Characoidei ANCESTRAL SPECIES 71 ENSGT00940000157795.g.a ENSGT00530000063627.b ENSGT00940000174866 ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304.c #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a.d.b ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT01060000248786.a.d ENSGT01060000248786.a.c ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00940000154352.A ENSGT00940000165576.b.b.b ENSGT01090000260005.a.b.a.a ENSGT00940000157539 ENSGT00940000160279.g Mexicana tetra MODERN SPECIES 19 ENSAMXG00000042008 ENSAMXG00000038557 exoc6 (ENSAMXG00000011954) cyp26a1 (ENSAMXG00000011960) reep3b (ENSAMXG00000040684) JMJD1C (ENSAMXG00000011988) egr2b (ENSAMXG00000039367) nrbf2b (ENSAMXG00000032436) ENSAMXG00000040739 ENSAMXG00000041834 cabcoco1 (ENSAMXG00000012013) tmem26b (ENSAMXG00000034287) RHOBTB1 (ENSAMXG00000040637) ANK3 (ENSAMXG00000012035) fam117ab (ENSAMXG00000012089) #21 ndufa4b (ENSAMXG00000012092) #22 ENSAMXG00000042147 #25 ENSAMXG00000012094 ENSAMXG00000043846 ngfrb (ENSAMXG00000012101) #32 slc4a1b (ENSAMXG00000012104) #33 atxn7l3b (ENSAMXG00000012107) #35 SMARCD2 (ENSAMXG00000012109) #36 psmc5 (ENSAMXG00000012111) #37 mpp2b (ENSAMXG00000012112) pyyb (ENSAMXG00000012114) tut1 (ENSAMXG00000042139) ENSAMXG00000043023 ENSAMXG00000042888 GJD3 (ENSAMXG00000025621) top2a (ENSAMXG00000012125) Red-bellied piranha MODERN SPECIES 528 ENSPNAG00000001301 ENSPNAG00000009146 ENSPNAG00000009156 #13 mylpfb (ENSPNAG00000009183) #14 pgap3 (ENSPNAG00000009226) #15 ENSPNAG00000009272 #16 erbb2 (ENSPNAG00000009391) #16 DCAF7 (ENSPNAG00000009434) ENSPNAG00000009454 TACO1 (ENSPNAG00000009464) #18 pth3r (ENSPNAG00000009539) #19 rundc3ab (ENSPNAG00000009595) #20 fam117ab (ENSPNAG00000009612) #21 ndufa4b (ENSPNAG00000009640) #22 ENSPNAG00000009649 #25 ENSPNAG00000009668 ENSPNAG00000009684 Electric eel MODERN SPECIES 132 adprh (ENSEEEG00000022690) ENSEEEG00000022691 ENSEEEG00000022698 ENSEEEG00000022701 ENSEEEG00000022702 ENSEEEG00000022703 ENSEEEG00000022704 #13 mylpfb (ENSEEEG00000022708) #14 pgap3 (ENSEEEG00000022771) #15 erbb2 (ENSEEEG00000022773) #16 DCAF7 (ENSEEEG00000022802) ENSEEEG00000022806 #18 pth3r (ENSEEEG00000022808) #19 rundc3ab (ENSEEEG00000022810) #20 fam117ab (ENSEEEG00000022811) #21 ndufa4b (ENSEEEG00000022813) #22 NXPH3 (ENSEEEG00000022814) #25 ENSEEEG00000022815 ENSEEEG00000022816 ENSEEEG00000022854 ENSEEEG00000022856 #29 ngfrb (ENSEEEG00000022859) #32 slc4a1b (ENSEEEG00000022871) #33 atxn7l3b (ENSEEEG00000022887) #35 SMARCD2 (ENSEEEG00000022935) #36 psmc5 (ENSEEEG00000023161) #37 mpp2b (ENSEEEG00000023191) pyyb (ENSEEEG00000023193) tut1 (ENSEEEG00000023196) mki67 (ENSEEEG00000023197) ENSEEEG00000023198 Cyprinoidei ANCESTRAL SPECIES 29 ENSGT00940000153582.b.b.a.b.b ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00730000110974.b #32 ENSGT00940000157423.a.b #33 ENSGT00940000158654 #36 ENSGT01020000230346.F #37 ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT00390000018386 ENSGT00940000157839 ENSGT00390000018266 ENSGT00940000154915 ENSGT00550000074840 ENSGT00390000000237 ENSGT00940000153500.a.a.w.b.h ENSGT00940000155830.e.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 178 ENSGT00940000167583.a ENSGT00940000158833.a.b.a.a.b.a ENSGT00390000015845.e ENSGT00950000183195.b.b.j ENSGT00940000166406.j ENSGT00940000158879 ENSGT01000000215509.b.a.a.a.a ENSGT00390000014549.db ENSGT00390000001304.b #15 ENSGT00940000158232.f #16 ENSGT00940000157790 ENSGT00390000012820.b #18 ENSGT00940000164841.b #19 ENSGT00940000158922.c.a #20 ENSGT00950000183046.a.b.k.f #21 ENSGT00940000154268.k.b.a #22 ENSGT00730000110974.b.a #32 ENSGT00940000157423.a.b.b #33 ENSGT00940000158253.eb.a #35 ENSGT00940000158654.k #36 ENSGT01020000230346.F.y #37 ENSGT00940000155348.B.d.e ENSGT00940000160643.j.c ENSGT00940000159914.b ENSGT00940000154352.A.e.b ENSGT00940000157839.c ENSGT00390000018266.x.a ENSGT00940000154915.vb ENSGT00550000074840 ENSGT00390000000237 ENSGT00940000153500.a.a.w.b.h.d Goldfish MODERN SPECIES 3 PPP1R9B (ENSCARG00000007864) ENSCARG00000007919 arg1 (ENSCARG00000007937) p4ha1a (ENSCARG00000007970) ENSCARG00000008504 ENSCARG00000008507 nudt13 (ENSCARG00000008512) ENSCARG00000008514 dnajc9 (ENSCARG00000008523) pgap3 (ENSCARG00000008528) #15 erbb2 (ENSCARG00000008719) #16 ENSCARG00000013887 #18 pth3r (ENSCARG00000013930) #19 rundc3ab (ENSCARG00000014663) #20 fam117ab (ENSCARG00000014688) #21 ndufa4b (ENSCARG00000014701) #22 ngfrb (ENSCARG00000014719) #32 slc4a1b (ENSCARG00000014732) #33 atxn7l3b (ENSCARG00000014790) #35 SMARCD2 (ENSCARG00000014806) #36 psmc5 (ENSCARG00000015460) #37 mpp2b (ENSCARG00000015550) pyyb (ENSCARG00000015600) mki67 (ENSCARG00000015604) eef2k (ENSCARG00000015629) mosmob (ENSCARG00000016330) uqcrc2b (ENSCARG00000016422) snu13b (ENSCARG00000019018) crym (ENSCARG00000019036) rac1a (ENSCARG00000019053) ENSCARG00000019081 Cyprininae_a ANCESTRAL SPECIES 292 ENSGT00940000167583.a ENSGT00940000158833.a.b.a.a.b.a ENSGT00390000015845.e ENSGT00950000183195.b.b.j ENSGT00940000166406.j ENSGT00940000158879 ENSGT01000000215509.b.a.a.a.a ENSGT00390000014549.db ENSGT00390000001304.b #15 ENSGT00940000158232.f #16 ENSGT00940000157790 ENSGT00390000012820.b #18 ENSGT00940000164841.b #19 ENSGT00940000158922.c.a #20 ENSGT00950000183046.a.b.k.f #21 ENSGT00940000154268.k.b.a #22 ENSGT00730000110974.b.a #32 ENSGT00940000157423.a.b.b #33 ENSGT00940000158253.eb.a #35 ENSGT00940000158654.k #36 ENSGT01020000230346.F.y #37 ENSGT00940000155348.B.d.e ENSGT00940000160643.j.c ENSGT00940000159914.b ENSGT00940000154352.A.e.b ENSGT00940000157839.c ENSGT00390000018266.x.a ENSGT00940000154915.vb ENSGT00550000074840.o.b ENSGT00550000074840.o.a ENSGT00390000000237 Common carp reference MODERN SPECIES 25 ENSCCRG00000004257 heatr1 (ENSCCRG00000004291) arg1 (ENSCCRG00000069343) p4ha1a (ENSCCRG00000025795) nudt13 (ENSCCRG00000026759) ENSCCRG00000001907 dnajc9 (ENSCCRG00000026775) ENSCCRG00000026784 pgap3 (ENSCCRG00000056148) #15 erbb2 (ENSCCRG00000048529) #16 ENSCCRG00000002486 ENSCCRG00000002494 #18 pth3r (ENSCCRG00000002505) #19 rundc3ab (ENSCCRG00000039006) #20 fam117ab (ENSCCRG00000039001) #21 ndufa4b (ENSCCRG00000038996) #22 ngfrb (ENSCCRG00000071358) #32 slc4a1b (ENSCCRG00000017289) #33 ENSCCRG00000072232 #36 psmc5 (ENSCCRG00000081360) #37 mpp2b (ENSCCRG00000028656) pyyb (ENSCCRG00000050944) tut1 (ENSCCRG00000080917) ndc80 (ENSCCRG00000050957) ENSCCRG00000073241 mki67 (ENSCCRG00000028641) eef2k (ENSCCRG00000028638) mosmob (ENSCCRG00000028636) snu13b (ENSCCRG00000059367) uqcrc2b (ENSCCRG00000022474) crym (ENSCCRG00000055391) Cyprininae ANCESTRAL SPECIES 5 ENSGT00600000084860.A.b ENSGT00390000014549.eb ENSGT00940000153582.b.b.a.b.b ENSGT00390000001304.a #15 ENSGT00940000158232.e #16 ENSGT00940000165921.f ENSGT00390000012820.a #18 ENSGT00940000164841.a #19 ENSGT00940000158922.c.b #20 ENSGT00950000183046.a.b.k.e #21 ENSGT00940000154268.k.b.b #22 ENSGT00730000110974.b.b #32 ENSGT00940000157423.a.b.a #33 ENSGT00940000158253.eb.b #35 ENSGT00940000158654.l #36 ENSGT01020000230346.F.z #37 ENSGT00940000155348.B.d.f ENSGT00940000160643.j.d ENSGT00940000159914.a ENSGT00390000018386.`b ENSGT00940000154352.A.e.a ENSGT00940000157839.d ENSGT00390000018266.x.b ENSGT00940000154915.wb ENSGT00940000153500.a.a.w.b.h.c ENSGT00940000155830.e.a.c Goldfish MODERN SPECIES 30 ENSCARG00000006879 prdm9 (ENSCARG00000006886) PPP1R9B (ENSCARG00000006906) heatr1 (ENSCARG00000007191) arg1 (ENSCARG00000011074) p4ha1a (ENSCARG00000011144) ENSCARG00000012735 dnajc9 (ENSCARG00000012747) si:ch211-207i20.2 (ENSCARG00000012760) pgap3 (ENSCARG00000012771) #15 erbb2 (ENSCARG00000012928) #16 ENSCARG00000016896 #18 pth3r (ENSCARG00000016920) #19 rundc3ab (ENSCARG00000017119) #20 fam117ab (ENSCARG00000017171) #21 ndufa4b (ENSCARG00000017190) #22 ngfrb (ENSCARG00000017208) #32 slc4a1b (ENSCARG00000017230) #33 atxn7l3b (ENSCARG00000017293) #35 SMARCD2 (ENSCARG00000017314) #36 psmc5 (ENSCARG00000017411) #37 mpp2b (ENSCARG00000017735) pyyb (ENSCARG00000017847) tut1 (ENSCARG00000017854) ndc80 (ENSCARG00000017879) mki67 (ENSCARG00000017959) eef2k (ENSCARG00000018019) mosmob (ENSCARG00000018376) uqcrc2b (ENSCARG00000018423) snu13b (ENSCARG00000018707) ENSCARG00000018730 Cyprininae_a ANCESTRAL SPECIES 14 ENSGT00600000084860.A.b ENSGT00390000014549.eb ENSGT00940000153582.b.b.a.b.b ENSGT00390000001304.a #15 ENSGT00940000158232.e #16 ENSGT00940000165921.f ENSGT00390000012820.a #18 ENSGT00940000164841.a #19 ENSGT00940000158922.c.b #20 ENSGT00950000183046.a.b.k.e #21 ENSGT00940000154268.k.b.b #22 ENSGT00730000110974.b.b #32 ENSGT00940000157423.a.b.a #33 ENSGT00940000158253.eb.b #35 ENSGT00940000158654.l #36 ENSGT01020000230346.F.z #37 ENSGT00940000155348.B.d.f ENSGT00940000160643.j.d ENSGT00940000159914.a ENSGT00390000018386.`b ENSGT00940000154352.A.e.a ENSGT00940000157839.d ENSGT00940000154915.wb ENSGT00940000153500.a.a.w.b.h.c ENSGT00940000155830.e.a.c ENSGT00940000154741.d.b Common carp reference MODERN SPECIES 44 ENSCCRG00000079880 prdm9 (ENSCCRG00000031677) ENSCCRG00000026712 heatr1 (ENSCCRG00000026734) arg1 (ENSCCRG00000073828) p4ha1a (ENSCCRG00000001633) ENSCCRG00000026766 si:ch211-207i20.2 (ENSCCRG00000001922) pgap3 (ENSCCRG00000026788) #15 erbb2 (ENSCCRG00000001972) #16 ENSCCRG00000007630 ENSCCRG00000007634 #18 pth3r (ENSCCRG00000007645) #19 rundc3ab (ENSCCRG00000007734) #20 fam117ab (ENSCCRG00000007777) #21 ndufa4b (ENSCCRG00000007780) #22 ngfrb (ENSCCRG00000064907) #32 slc4a1b (ENSCCRG00000010681) #33 atxn7l3b (ENSCCRG00000031286) #35 ENSCCRG00000020106 #36 psmc5 (ENSCCRG00000064132) #37 mpp2b (ENSCCRG00000076080) pyyb (ENSCCRG00000054435) tut1 (ENSCCRG00000028651) ndc80 (ENSCCRG00000028648) mki67 (ENSCCRG00000060335) eef2k (ENSCCRG00000070112) uqcrc2b (ENSCCRG00000079971) snu13b (ENSCCRG00000077601) rac1a (ENSCCRG00000076289) ENSCCRG00000022645 Golden-line barbel MODERN SPECIES 1318 ENSSGRG00000023848 #18 pth3r (ENSSGRG00000023850) #19 rundc3ab (ENSSGRG00000023854) #20 fam117ab (ENSSGRG00000023861) #21 ndufa4b (ENSSGRG00000023863) #22 ngfrb (ENSSGRG00000023868) #32 slc4a1b (ENSSGRG00000023872) #33 atxn7l3b (ENSSGRG00000023874) #35 SMARCD2 (ENSSGRG00000023892) #36 psmc5 (ENSSGRG00000024276) #37 mpp2b (ENSSGRG00000024282) pyyb (ENSSGRG00000024617) tut1 (ENSSGRG00000024618) mki67 (ENSSGRG00000024619) eef2k (ENSSGRG00000024621) mosmob (ENSSGRG00000024969) ndc80 (ENSSGRG00000024974) uqcrc2b (ENSSGRG00000024994) snu13b (ENSSGRG00000026243) crym (ENSSGRG00000026249) Zebrafish MODERN SPECIES 3 taco1 (ENSDARG00000062943) #18 ENSDARG00000010296 erbb2 (ENSDARG00000026294) #16 pgap3 (ENSDARG00000057531) #15 si:ch211-207i20.2 (ENSDARG00000099986) dnajc9 (ENSDARG00000031293) ENSDARG00000071733 nudt13 (ENSDARG00000057417) p4ha1a (ENSDARG00000033537) arg1 (ENSDARG00000057429) heatr1 (ENSDARG00000099742) PPP1R9B (ENSDARG00000071709) prdm9 (ENSDARG00000005382) rundc3ab (ENSDARG00000002546) #20 fam117ab (ENSDARG00000079252) #21 ndufa4b (ENSDARG00000056108) #22 ngfrb (ENSDARG00000089223) #32 slc4a1b (ENSDARG00000024560) #33 atxn7l3b (ENSDARG00000079131) #35 SMARCD2 (ENSDARG00000088877) #36 psmc5 (ENSDARG00000015315) #37 ENSDARG00000096505 mpp2b (ENSDARG00000010957) pyyb (ENSDARG00000035832) tut1 (ENSDARG00000057321) ndc80 (ENSDARG00000071694) mki67 (ENSDARG00000091150) eef2k (ENSDARG00000035835) mosmob (ENSDARG00000035837) uqcrc2b (ENSDARG00000071691) snu13b (ENSDARG00000023299) Clupeiformes ANCESTRAL SPECIES 196 ENSGT00940000157795.h ENSGT00940000160639.b.a.b.b.b ENSGT00530000063627.b ENSGT00940000159141.j.b ENSGT01100000263491.a.b.a.a.a.b.b.a.h ENSGT00940000164923.a.a #13 ENSGT00940000159038.a.a #14 ENSGT00390000001304 #15 ENSGT00940000158232 #16 ENSGT00390000006939.i.a.f.a ENSGT00940000157790 ENSGT00390000012820 #18 ENSGT00940000164841 #19 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 ENSGT00950000182883.a.a.b #25 ENSGT00950000182937.A.a.o.e ENSGT00940000155061.a.b.k.b ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00950000183185.c.a.b.a.b ENSGT00940000169341 Denticle herring MODERN SPECIES 11 ENSDCDG00000002436 ENSDCDG00000013234 #13 mylpfb (ENSDCDG00000013182) #14 pgap3 (ENSDCDG00000013162) #15 erbb2 (ENSDCDG00000006021) #16 dcaf7 (ENSDCDG00000005630) ENSDCDG00000005624 TACO1 (ENSDCDG00000005619) #18 pth3r (ENSDCDG00000005586) #19 rundc3ab (ENSDCDG00000005567) #20 ENSDCDG00000005564 ENSDCDG00000005562 ENSDCDG00000005561 ENSDCDG00000005560 ENSDCDG00000005558 ndufa4b (ENSDCDG00000005557) #22 NXPH3 (ENSDCDG00000005555) #25 ENSDCDG00000005506 ENSDCDG00000005036 zgc:92749 (ENSDCDG00000005004) ENSDCDG00000005001 ENSDCDG00000004934 ENSDCDG00000004921 ENSDCDG00000004920 ENSDCDG00000004916 ENSDCDG00000004913 ENSDCDG00000004911 ENSDCDG00000004910 ENSDCDG00000004909 ENSDCDG00000004907 ENSDCDG00000004904 Osteoglossiformes ANCESTRAL SPECIES 233 ENSGT00940000159805.c ENSGT00940000160236.b ENSGT00990000206702 ENSGT00390000001304 #15 ENSGT00940000158232.a #16 ENSGT00390000006939.h ENSGT00940000157790 ENSGT00940000159539 ENSGT00940000158767.d ENSGT00390000012820 #18 ENSGT00940000158377.a.b ENSGT00940000164841 #19 ENSGT00940000156559 ENSGT00940000158922.c #20 ENSGT00950000183046.a.b.k #21 ENSGT00940000154268.k.b #22 P. kingsleyae MODERN SPECIES 606 gfap (ENSPKIG00000002738) MAP3K3 (ENSPKIG00000002762) TACO1 (ENSPKIG00000002814) #18 limd2 (ENSPKIG00000002830) pth3r (ENSPKIG00000002847) #19 ddx42 (ENSPKIG00000002901) rundc3ab (ENSPKIG00000002984) #20 fam117ab (ENSPKIG00000003060) #21 ndufa4b (ENSPKIG00000003130) #22 Asian bonytongue MODERN SPECIES 12 tbc1d10b (ENSSFOG00015013650) hsd3b7 (ENSSFOG00015013685) ENSSFOG00015013711 pgap3 (ENSSFOG00015013733) #15 erbb2 (ENSSFOG00015013756) #16 dcaf7 (ENSSFOG00015032214) ENSSFOG00015013817 gfap (ENSSFOG00015013855) MAP3K3 (ENSSFOG00015013876) TACO1 (ENSSFOG00015013916) #18 limd2 (ENSSFOG00015016642) pth3r (ENSSFOG00015013985) #19 ddx42 (ENSSFOG00015014064) rundc3ab (ENSSFOG00015014128) #20 ENSSFOG00015014184 #21 ndufa4b (ENSSFOG00015027987) #22 spop (ENSSFOG00015014233) ##24 ENSSFOG00015014253 ##25 ENSSFOG00015027842 ENSSFOG00015023195 #30 ENSSFOG00015033179 ENSSFOG00015032144 NGFR (ENSSFOG00015021410) #32 selenow2a (ENSSFOG00015028894) KLHL10 (ENSSFOG00015021431) KLHL10 (ENSSFOG00015021446) slc4a1b (ENSSFOG00015021462) #33 ubtf (ENSSFOG00015021525) ATXN7L3 (ENSSFOG00015030337) #35 ENSSFOG00015021588 adprh (ENSSFOG00015030953) Osteoglossocephalai ANCESTRAL SPECIES 182 ENSGT00390000006939 ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00390000012820 #18 ENSGT00940000158377.a ENSGT00940000164841 #19 ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00470000042293.a.b.a.a ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00940000154268.l ##22 ENSGT00940000154376.b ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 Clupeocephala ANCESTRAL SPECIES 60 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Euteleosteomorpha ANCESTRAL SPECIES ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00980000200496 ENSGT01090000260346 ENSGT00940000158922.d ##20 ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a Acanthomorphata ANCESTRAL SPECIES 2 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00980000200496 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Cod MODERN SPECIES 11 hsd3b7 (ENSGMOG00000013754) ENSGMOG00000013774 ccdc47 (ENSGMOG00000013843) dcaf7 (ENSGMOG00000017164) gfap (ENSGMOG00000004683) ENSGMOG00000004640 limd2 (ENSGMOG00000026647) ddx42 (ENSGMOG00000004595) strada (ENSGMOG00000031870) rnf113a (ENSGMOG00000004541) ENSGMOG00000004523 ##20 ENSGMOG00000008257 ENSGMOG00000035374 ENSGMOG00000026122 slc35b1 (ENSGMOG00000004458) ndufa4a (ENSGMOG00000030235) ##22 ENSGMOG00000006614 ##25 ENSGMOG00000026497 selenow2b (ENSGMOG00000036715) slc4a1a (ENSGMOG00000001567) ##33 ubtf (ENSGMOG00000001531) atxn7l3a (ENSGMOG00000001510) #35 tmub2 (ENSGMOG00000035569) asb16 (ENSGMOG00000032035) ENSGMOG00000028699 asic2 (ENSGMOG00000017812) ENSGMOG00000008887 ENSGMOG00000029197 ENSGMOG00000033655 ENSGMOG00000008844 ENSGMOG00000026968 Euacanthomorphacea ANCESTRAL SPECIES 5 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00980000200496 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Pinecone sodierfish MODERN SPECIES 22 ccdc47 (ENSMMDG00005004429) DCAF7 (ENSMMDG00005004399) ENSMMDG00005004393 kcnh6a (ENSMMDG00005004190) gfap (ENSMMDG00005016480) MAP3K3 (ENSMMDG00005016475) limd2 (ENSMMDG00005016471) ddx42 (ENSMMDG00005016410) strada (ENSMMDG00005016206) rnf113a (ENSMMDG00005016193) ENSMMDG00005016189 ENSMMDG00005016186 RUNDC3A (ENSMMDG00005016184) ##20 FAM117A (ENSMMDG00005016179) ##21 slc35b1 (ENSMMDG00005016177) ndufa4a (ENSMMDG00005016172) ##22 spop (ENSMMDG00005016171) ##24 NXPH3 (ENSMMDG00005016169) ##25 NGFR (ENSMMDG00005016074) ##32 selenow2b (ENSMMDG00005016073) slc4a1a (ENSMMDG00005016070) ##33 ubtf (ENSMMDG00005015512) ENSMMDG00005015488 tmub2 (ENSMMDG00005015487) asb16 (ENSMMDG00005015484) ENSMMDG00005015483 ENSMMDG00005015481 ENSMMDG00005015479 asic2 (ENSMMDG00005015478) MPP3 (ENSMMDG00005015467) ZNF281 (ENSMMDG00005015462) Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Tiger tail seahorse MODERN SPECIES 81 pheta2 (ENSHCOG00000003162) ##13 cd2bp2 (ENSHCOG00000000089) ENSHCOG00000003181 kcnh6a (ENSHCOG00000003197) MAP3K3 (ENSHCOG00000003256) limd2 (ENSHCOG00000003270) ddx42 (ENSHCOG00000003357) strada (ENSHCOG00000003391) rnf113a (ENSHCOG00000003421) ENSHCOG00000003428 ENSHCOG00000003431 RUNDC3A (ENSHCOG00000003443) ##20 slc35b1 (ENSHCOG00000003513) ENSHCOG00000003524 ##21 slc35b1 (ENSHCOG00000003541) ndufa4a (ENSHCOG00000003552) ##22 NXPH3 (ENSHCOG00000003568) ##25 ENSHCOG00000003575 ##32 ENSHCOG00000003581 selenow2b (ENSHCOG00000003584) ENSHCOG00000003612 slc4a1a (ENSHCOG00000003654) ##33 ubtf (ENSHCOG00000003715) ENSHCOG00000003785 tmub2 (ENSHCOG00000003806) asb16 (ENSHCOG00000003849) ENSHCOG00000003875 asic2 (ENSHCOG00000003900) MPP3 (ENSHCOG00000004051) ENSHCOG00000004079 ENSHCOG00000004100 Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Ovalentaria ANCESTRAL SPECIES 1 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Ovalentaria_B ANCESTRAL SPECIES ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Cichlidae ANCESTRAL SPECIES 16 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000174710 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000174710 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000174710 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Haplochromini ANCESTRAL SPECIES 12 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000174710 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Burton s mouthbrooder MODERN SPECIES 314 ccdc47 (ENSHBUG00000008881) DCAF7 (ENSHBUG00000008851) kcnh6a (ENSHBUG00000008811) gfap (ENSHBUG00000008793) MAP3K3 (ENSHBUG00000008757) limd2 (ENSHBUG00000008715) ddx42 (ENSHBUG00000008705) strada (ENSHBUG00000008691) rnf113a (ENSHBUG00000008626) RUNDC3A (ENSHBUG00000008611) ##20 ENSHBUG00000008602 ENSHBUG00000008593 ENSHBUG00000008586 FAM117A (ENSHBUG00000008573) ##21 slc35b1 (ENSHBUG00000008561) ndufa4a (ENSHBUG00000008529) ##22 ENSHBUG00000008421 spop (ENSHBUG00000008411) ##24 NXPH3 (ENSHBUG00000008374) ##25 NGFR (ENSHBUG00000008364) ##32 ENSHBUG00000008326 selenow2b (ENSHBUG00000008305) slc4a1a (ENSHBUG00000008288) ##33 ubtf (ENSHBUG00000008228) ENSHBUG00000008136 tmub2 (ENSHBUG00000008032) asb16 (ENSHBUG00000008023) ENSHBUG00000008014 ENSHBUG00000008005 asic2 (ENSHBUG00000007991) MPP3 (ENSHBUG00000007938) Haplochromini_A ANCESTRAL SPECIES 14 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000174710 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00950000182812.B.a.a.o.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c P. nyererei MODERN SPECIES 313 kcnh6a (ENSPNYG00000014064) gfap (ENSPNYG00000014037) ENSPNYG00000014020 MAP3K3 (ENSPNYG00000013989) limd2 (ENSPNYG00000013976) ddx42 (ENSPNYG00000013954) ENSPNYG00000013940 strada (ENSPNYG00000013907) rnf113a (ENSPNYG00000013863) ENSPNYG00000013843 ENSPNYG00000013835 ENSPNYG00000013828 RUNDC3A (ENSPNYG00000013759) ##20 FAM117A (ENSPNYG00000013696) ##21 slc35b1 (ENSPNYG00000013642) ndufa4a (ENSPNYG00000013603) ##22 spop (ENSPNYG00000013554) ##24 NXPH3 (ENSPNYG00000013519) ##25 NGFR (ENSPNYG00000013507) ##32 ENSPNYG00000013502 selenow2b (ENSPNYG00000013474) slc4a1a (ENSPNYG00000013439) ##33 ubtf (ENSPNYG00000013380) ENSPNYG00000013327 tmub2 (ENSPNYG00000013305) asb16 (ENSPNYG00000013298) ENSPNYG00000013279 ENSPNYG00000013269 ENSPNYG00000013257 asic2 (ENSPNYG00000013229) MPP3 (ENSPNYG00000013196) Haplochromini_B ANCESTRAL SPECIES 21 ENSGT00940000159805 ENSGT00940000160236.p ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00950000182812.B.a.a.o.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Eastern happy MODERN SPECIES 16 DCAF7 (ENSACLG00000024810) kcnh6a (ENSACLG00000024824) gfap (ENSACLG00000024861) MAP3K3 (ENSACLG00000025034) ENSACLG00000025088 limd2 (ENSACLG00000025096) ddx42 (ENSACLG00000025113) strada (ENSACLG00000025184) rnf113a (ENSACLG00000025256) RUNDC3A (ENSACLG00000025385) ##20 ENSACLG00000025400 ENSACLG00000025402 ENSACLG00000025403 FAM117A (ENSACLG00000025413) ##21 slc35b1 (ENSACLG00000025420) ndufa4a (ENSACLG00000025435) ##22 spop (ENSACLG00000025444) ##24 NXPH3 (ENSACLG00000025484) ##25 NGFR (ENSACLG00000025495) ##32 ENSACLG00000025507 ENSACLG00000025511 selenow2b (ENSACLG00000025513) slc4a1a (ENSACLG00000025519) ##33 ubtf (ENSACLG00000025572) ENSACLG00000025625 tmub2 (ENSACLG00000025653) asb16 (ENSACLG00000025656) ENSACLG00000025662 ENSACLG00000025668 ENSACLG00000025677 asic2 (ENSACLG00000000027) Zebra mbuna MODERN SPECIES 1107 ccdc47 (ENSMZEG00005023138) ENSMZEG00005023136 DCAF7 (ENSMZEG00005023134) kcnh6a (ENSMZEG00005023130) gfap (ENSMZEG00005023127) MAP3K3 (ENSMZEG00005023117) limd2 (ENSMZEG00005023112) ddx42 (ENSMZEG00005023103) strada (ENSMZEG00005023094) rnf113a (ENSMZEG00005023086) ENSMZEG00005023082 ENSMZEG00005023079 RUNDC3A (ENSMZEG00005023078) ##20 FAM117A (ENSMZEG00005023074) ##21 slc35b1 (ENSMZEG00005023070) ndufa4a (ENSMZEG00005023067) ##22 spop (ENSMZEG00005023062) ##24 NXPH3 (ENSMZEG00005023056) ##25 NGFR (ENSMZEG00005023052) ##32 ENSMZEG00005023049 selenow2b (ENSMZEG00005023047) slc4a1a (ENSMZEG00005023040) ##33 ubtf (ENSMZEG00005023031) ENSMZEG00005023025 tmub2 (ENSMZEG00005023020) asb16 (ENSMZEG00005023018) ENSMZEG00005023016 ENSMZEG00005023014 ENSMZEG00005023010 asic2 (ENSMZEG00005023005) MPP3 (ENSMZEG00005023002) Lyretail cichlid MODERN SPECIES 387 ccdc47 (ENSNBRG00000004698) DCAF7 (ENSNBRG00000004665) kcnh6a (ENSNBRG00000004618) gfap (ENSNBRG00000004584) MAP3K3 (ENSNBRG00000004526) limd2 (ENSNBRG00000004508) ddx42 (ENSNBRG00000004466) strada (ENSNBRG00000004338) rnf113a (ENSNBRG00000004314) ENSNBRG00000004305 ENSNBRG00000004298 ENSNBRG00000004295 RUNDC3A (ENSNBRG00000004167) ##20 ENSNBRG00000004146 ##21 slc35b1 (ENSNBRG00000004123) ndufa4a (ENSNBRG00000004018) ##22 spop (ENSNBRG00000003973) ##24 NXPH3 (ENSNBRG00000003957) ##25 ENSNBRG00000003938 ##32 ENSNBRG00000003923 selenow2b (ENSNBRG00000003909) ENSNBRG00000003894 slc4a1a (ENSNBRG00000003876) ##33 ubtf (ENSNBRG00000003814) atxn7l3a (ENSNBRG00000003768) #35 tmub2 (ENSNBRG00000003750) asb16 (ENSNBRG00000003724) ENSNBRG00000003660 ENSNBRG00000003635 asic2 (ENSNBRG00000003595) MPP3 (ENSNBRG00000003561) Nile tilapia MODERN SPECIES 16 ENSONIG00000032123 DCAF7 (ENSONIG00000030039) kcnh6a (ENSONIG00000000710) gfap (ENSONIG00000000724) MAP3K3 (ENSONIG00000000728) limd2 (ENSONIG00000031796) ddx42 (ENSONIG00000000734) strada (ENSONIG00000000738) rnf113a (ENSONIG00000042350) ENSONIG00000037829 ENSONIG00000027590 ENSONIG00000037074 RUNDC3A (ENSONIG00000000748) ##20 FAM117A (ENSONIG00000000757) ##21 slc35b1 (ENSONIG00000000758) NDUFA4 (ENSONIG00000042265) ##22 spop (ENSONIG00000000767) ##24 NXPH3 (ENSONIG00000034515) ##25 NGFR (ENSONIG00000028321) ##32 ENSONIG00000027117 ENSONIG00000032741 ENSONIG00000000776 selenow2b (ENSONIG00000039635) slc4a1a (ENSONIG00000000778) ##33 ubtf (ENSONIG00000000796) atxn7l3a (ENSONIG00000000812) #35 tmub2 (ENSONIG00000000814) asb16 (ENSONIG00000000816) ENSONIG00000000821 ENSONIG00000030325 ENSONIG00000035362 Midas cichlid MODERN SPECIES 550 ccdc47 (ENSACIG00000007221) DCAF7 (ENSACIG00000007243) kcnh6a (ENSACIG00000007268) gfap (ENSACIG00000007312) MAP3K3 (ENSACIG00000007336) limd2 (ENSACIG00000007363) ddx42 (ENSACIG00000007376) ENSACIG00000007408 strada (ENSACIG00000007423) rnf113a (ENSACIG00000007458) RUNDC3A (ENSACIG00000007483) ##20 ENSACIG00000007506 ENSACIG00000007510 FAM117A (ENSACIG00000007517) ##21 slc35b1 (ENSACIG00000007536) ndufa4a (ENSACIG00000007557) ##22 spop (ENSACIG00000007656) ##24 NXPH3 (ENSACIG00000007686) ##25 NGFR (ENSACIG00000007695) ##32 ENSACIG00000007725 ENSACIG00000007737 selenow2b (ENSACIG00000007747) slc4a1a (ENSACIG00000007777) ##33 ubtf (ENSACIG00000007826) atxn7l3a (ENSACIG00000007998) #35 tmub2 (ENSACIG00000008030) asb16 (ENSACIG00000008051) ENSACIG00000008083 ENSACIG00000008095 asic2 (ENSACIG00000008109) MPP3 (ENSACIG00000008139) Pomacentridae ANCESTRAL SPECIES 24 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Pomacentridae_A ANCESTRAL SPECIES 15 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Amphiprion ANCESTRAL SPECIES 9 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT01100000263981 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Orange clownfish MODERN SPECIES 5 ENSAPEG00000000661 ccdc47 (ENSAPEG00000000668) DCAF7 (ENSAPEG00000000722) kcnh6a (ENSAPEG00000000747) gfap (ENSAPEG00000000842) MAP3K3 (ENSAPEG00000000898) limd2 (ENSAPEG00000000969) ddx42 (ENSAPEG00000000984) strada (ENSAPEG00000001041) rnf113a (ENSAPEG00000001084) RUNDC3A (ENSAPEG00000001102) ##20 ENSAPEG00000001279 ENSAPEG00000001288 FAM117A (ENSAPEG00000001298) ##21 slc35b1 (ENSAPEG00000001343) ndufa4a (ENSAPEG00000001384) ##22 spop (ENSAPEG00000001406) ##24 NXPH3 (ENSAPEG00000001445) ##25 NGFR (ENSAPEG00000001456) ##32 ENSAPEG00000001491 selenow2b (ENSAPEG00000001497) slc4a1a (ENSAPEG00000001508) ##33 ubtf (ENSAPEG00000001545) atxn7l3a (ENSAPEG00000001614) #35 tmub2 (ENSAPEG00000001658) asb16 (ENSAPEG00000001675) ENSAPEG00000001708 ENSAPEG00000001787 asic2 (ENSAPEG00000001805) MPP3 (ENSAPEG00000001839) ENSAPEG00000001915 Clown anemonefish MODERN SPECIES 3408 ccdc47 (ENSAOCG00000003642) DCAF7 (ENSAOCG00000003621) ENSAOCG00000003610 kcnh6a (ENSAOCG00000003592) gfap (ENSAOCG00000003566) MAP3K3 (ENSAOCG00000003550) limd2 (ENSAOCG00000003530) ddx42 (ENSAOCG00000003520) strada (ENSAOCG00000003498) rnf113a (ENSAOCG00000003485) RUNDC3A (ENSAOCG00000003476) ##20 ENSAOCG00000003474 ENSAOCG00000003470 FAM117A (ENSAOCG00000002296) ##21 slc35b1 (ENSAOCG00000003459) ndufa4a (ENSAOCG00000003450) ##22 spop (ENSAOCG00000003449) ##24 NXPH3 (ENSAOCG00000003444) ##25 ENSAOCG00000003439 NGFR (ENSAOCG00000003435) ##32 ENSAOCG00000003427 ENSAOCG00000003425 selenow2b (ENSAOCG00000003420) slc4a1a (ENSAOCG00000003417) ##33 ubtf (ENSAOCG00000003404) atxn7l3a (ENSAOCG00000003384) #35 tmub2 (ENSAOCG00000003373) asb16 (ENSAOCG00000003372) ENSAOCG00000003365 ENSAOCG00000003359 asic2 (ENSAOCG00000003355) Spiny chromis MODERN SPECIES 11 ccdc47 (ENSAPOG00000001124) DCAF7 (ENSAPOG00000017915) kcnh6a (ENSAPOG00000017876) gfap (ENSAPOG00000017868) MAP3K3 (ENSAPOG00000017794) limd2 (ENSAPOG00000017696) ddx42 (ENSAPOG00000017675) strada (ENSAPOG00000017564) rnf113a (ENSAPOG00000017510) RUNDC3A (ENSAPOG00000017501) ##20 ENSAPOG00000017494 ENSAPOG00000017491 ENSAPOG00000017478 FAM117A (ENSAPOG00000017470) ##21 slc35b1 (ENSAPOG00000017434) ndufa4a (ENSAPOG00000017370) ##22 spop (ENSAPOG00000017175) ##24 NXPH3 (ENSAPOG00000017155) ##25 Bicolor damselfish MODERN SPECIES 487 gfap (ENSSPAG00000012986) MAP3K3 (ENSSPAG00000013010) limd2 (ENSSPAG00000013041) ddx42 (ENSSPAG00000013055) strada (ENSSPAG00000013122) rnf113a (ENSSPAG00000013187) RUNDC3A (ENSSPAG00000013207) ##20 ENSSPAG00000013224 ENSSPAG00000013231 FAM117A (ENSSPAG00000013238) ##21 slc35b1 (ENSSPAG00000013252) ndufa4a (ENSSPAG00000013285) ##22 spop (ENSSPAG00000013300) ##24 ENSSPAG00000013335 NXPH3 (ENSSPAG00000013341) ##25 NGFR (ENSSPAG00000013348) ##32 Atherinomorphae ANCESTRAL SPECIES 6 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Aplocheiloidei ANCESTRAL SPECIES 7 ENSGT00940000157423.a.a ##33 ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000006939.i.b ENSGT00390000013997 ENSGT00940000162290 ENSGT00940000160236 ENSGT00940000159805 ENSGT00940000159038.a.b ##14 ENSGT00940000164923.a.b ##13 ENSGT00390000012483 ENSGT00520000055626.b ENSGT00390000000050 ENSGT00940000166194 ENSGT00390000018316.a.f ##10 Mangrove rivulus MODERN SPECIES 47 slc4a1a (ENSKMAG00000010157) ##33 ENSKMAG00000010144 selenow2b (ENSKMAG00000010109) kcnh6a (ENSKMAG00000010062) gfap (ENSKMAG00000010022) ENSKMAG00000009996 limd2 (ENSKMAG00000009984) ddx42 (ENSKMAG00000009914) strada (ENSKMAG00000009851) rnf113a (ENSKMAG00000009830) ENSKMAG00000009817 ENSKMAG00000009809 RUNDC3A (ENSKMAG00000009741) ##20 ENSKMAG00000009693 ##21 slc35b1 (ENSKMAG00000009665) ndufa4a (ENSKMAG00000009645) ##22 ENSKMAG00000009635 ##25 NGFR (ENSKMAG00000009613) ##32 ENSKMAG00000009600 DCAF7 (ENSKMAG00000009567) ccdc47 (ENSKMAG00000009514) ENSKMAG00000009484 hsd3b7 (ENSKMAG00000009472) tbc1d10b (ENSKMAG00000009461) mylpfa (ENSKMAG00000009426) ##14 pheta2 (ENSKMAG00000009388) ##13 cd2bp2 (ENSKMAG00000009367) ENSKMAG00000009328 rusf1 (ENSKMAG00000009264) ENSKMAG00000009243 elob (ENSKMAG00000009224) ##10 Turquoise killifish MODERN SPECIES 1614 ubtf (ENSNFUG00015002045) slc4a1a (ENSNFUG00015001398) ##33 selenow2b (ENSNFUG00015001263) kcnh6a (ENSNFUG00015001250) GFAP (ENSNFUG00015001229) MAP3K3 (ENSNFUG00015001184) limd2 (ENSNFUG00015001158) ddx42 (ENSNFUG00015001120) STRADA (ENSNFUG00015001034) RNF113A (ENSNFUG00015000993) ENSNFUG00015000981 ENSNFUG00015000975 RUNDC3A (ENSNFUG00015000950) ##20 FAM117A (ENSNFUG00015000930) ##21 slc35b1 (ENSNFUG00015000882) NDUFA4 (ENSNFUG00015000864) ##22 ENSNFUG00015000861 ENSNFUG00015000858 ENSNFUG00015000854 ENSNFUG00015000850 ENSNFUG00015000846 ENSNFUG00015000844 ##25 NGFR (ENSNFUG00015000837) ##32 ENSNFUG00015000832 DCAF7 (ENSNFUG00015000829) ccdc47 (ENSNFUG00015000813) ENSNFUG00015000804 SETD1A (ENSNFUG00015000799) HSD3B7 (ENSNFUG00015000796) TBC1D10B (ENSNFUG00015000755) mylpfa (ENSNFUG00015000710) ##14 Cyprinodontoidei ANCESTRAL SPECIES 18 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Poeciliinae ANCESTRAL SPECIES 1 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Poecilia ANCESTRAL SPECIES 8 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a NAME_6 ANCESTRAL SPECIES 18 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Amazon molly DUPLICATION Amazon molly MODERN SPECIES 462 ENSPFOG00000009669 ##21 slc35b1 (ENSPFOG00000009589) ndufa4a (ENSPFOG00000009582) ##22 ENSPFOG00000019938 ##25 NGFR (ENSPFOG00000009528) ##32 ENSPFOG00000009514 slc4a1a (ENSPFOG00000009413) ##33 slc4a1a (ENSPFOG00000009083) ##33 ubtf (ENSPFOG00000008975) atxn7l3a (ENSPFOG00000008910) #35 tmub2 (ENSPFOG00000023858) asb16 (ENSPFOG00000022577) ENSPFOG00000008807 ENSPFOG00000019937 asic2 (ENSPFOG00000008648) MPP3 (ENSPFOG00000008101) ENSPFOG00000023798 ZNF281 (ENSPFOG00000008024) Amazon molly MODERN SPECIES 384 mylpfa (ENSPFOG00000013531) ##14 tbc1d10b (ENSPFOG00000013605) hsd3b7 (ENSPFOG00000013637) ENSPFOG00000013669 ccdc47 (ENSPFOG00000013720) DCAF7 (ENSPFOG00000013799) kcnh6a (ENSPFOG00000013842) MAP3K3 (ENSPFOG00000013959) limd2 (ENSPFOG00000014092) ddx42 (ENSPFOG00000014104) strada (ENSPFOG00000014165) rnf113a (ENSPFOG00000014248) RUNDC3A (ENSPFOG00000014303) ##20 ENSPFOG00000021973 ##21 slc35b1 (ENSPFOG00000014403) ndufa4a (ENSPFOG00000014466) ##22 Sailfin molly MODERN SPECIES 2972 ENSPLAG00000015031 ENSPLAG00000015038 ENSPLAG00000015045 RUNDC3A (ENSPLAG00000015076) ##20 ENSPLAG00000015104 ##21 slc35b1 (ENSPLAG00000015130) ndufa4a (ENSPLAG00000015139) ##22 Guppy MODERN SPECIES 460 DCAF7 (ENSPREG00000010157) ENSPREG00000010120 kcnh6a (ENSPREG00000010079) gfap (ENSPREG00000010040) MAP3K3 (ENSPREG00000009969) limd2 (ENSPREG00000009948) ddx42 (ENSPREG00000009926) strada (ENSPREG00000009916) rnf113a (ENSPREG00000009900) ENSPREG00000009896 ENSPREG00000009889 ENSPREG00000009881 RUNDC3A (ENSPREG00000009836) ##20 ENSPREG00000009824 ##21 slc35b1 (ENSPREG00000009804) ndufa4a (ENSPREG00000009800) ##22 ENSPREG00000009786 ##25 ENSPREG00000009778 NGFR (ENSPREG00000009763) ##32 ENSPREG00000009756 ENSPREG00000009746 selenow2b (ENSPREG00000009740) slc4a1a (ENSPREG00000009682) ##33 ubtf (ENSPREG00000009616) atxn7l3a (ENSPREG00000009586) #35 tmub2 (ENSPREG00000009572) asb16 (ENSPREG00000009560) ENSPREG00000009541 ENSPREG00000009532 ENSPREG00000009467 EZH1 (ENSPREG00000009410) Platyfish MODERN SPECIES 7 DCAF7 (ENSXMAG00000008052) kcnh6a (ENSXMAG00000008073) gfap (ENSXMAG00000030000) MAP3K3 (ENSXMAG00000008111) limd2 (ENSXMAG00000021598) ddx42 (ENSXMAG00000008138) strada (ENSXMAG00000027127) rnf113a (ENSXMAG00000008169) RUNDC3A (ENSXMAG00000020987) ##20 ENSXMAG00000021920 ENSXMAG00000023789 ENSXMAG00000025357 ENSXMAG00000008192 ##21 ENSXMAG00000026407 slc35b1 (ENSXMAG00000025030) ndufa4a (ENSXMAG00000022120) ##22 ENSXMAG00000026283 NXPH3 (ENSXMAG00000008203) ##25 NGFR (ENSXMAG00000008204) ##32 ENSXMAG00000008208 ENSXMAG00000026489 selenow2b (ENSXMAG00000025994) slc4a1a (ENSXMAG00000008209) ##33 ubtf (ENSXMAG00000008248) atxn7l3a (ENSXMAG00000008271) #35 tmub2 (ENSXMAG00000008276) asb16 (ENSXMAG00000008279) ENSXMAG00000008282 ENSXMAG00000019737 asic2 (ENSXMAG00000008283) MPP3 (ENSXMAG00000008287) NAME_4 ANCESTRAL SPECIES 47 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b Mummichog MODERN SPECIES 2412 ENSFHEG00000023258 ccdc47 (ENSFHEG00000023264) ENSFHEG00000023267 kcnh6a (ENSFHEG00000023270) gfap (ENSFHEG00000023273) MAP3K3 (ENSFHEG00000023280) limd2 (ENSFHEG00000023286) ddx42 (ENSFHEG00000023290) strada (ENSFHEG00000023296) rnf113a (ENSFHEG00000023305) RUNDC3A (ENSFHEG00000023307) ##20 ENSFHEG00000023309 ENSFHEG00000023311 FAM117A (ENSFHEG00000023313) ##21 slc35b1 (ENSFHEG00000023322) ndufa4a (ENSFHEG00000023324) ##22 spop (ENSFHEG00000023327) ##24 NXPH3 (ENSFHEG00000023329) ##25 NGFR (ENSFHEG00000023332) ##32 ENSFHEG00000023334 ENSFHEG00000023337 slc4a1a (ENSFHEG00000023339) ##33 ubtf (ENSFHEG00000023343) atxn7l3a (ENSFHEG00000023357) #35 tmub2 (ENSFHEG00000023366) asb16 (ENSFHEG00000023368) ENSFHEG00000023371 ENSFHEG00000023373 Sheepshead minnow MODERN SPECIES 1219 slc35b1 (ENSCVAG00000022428) ndufa4a (ENSCVAG00000022410) ##22 Oryzias ANCESTRAL SPECIES ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Oryzias_a ANCESTRAL SPECIES 10 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT01100000264505 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Chinese medaka MODERN SPECIES 723 ENSOSIG00000006127 ccdc47 (ENSOSIG00000006110) DCAF7 (ENSOSIG00000006109) kcnh6a (ENSOSIG00000006108) gfap (ENSOSIG00000006009) MAP3K3 (ENSOSIG00000005883) limd2 (ENSOSIG00000005868) ddx42 (ENSOSIG00000004163) strada (ENSOSIG00000004079) rnf113a (ENSOSIG00000004025) ENSOSIG00000004012 ENSOSIG00000004008 RUNDC3A (ENSOSIG00000004001) ##20 ENSOSIG00000003994 ##21 slc35b1 (ENSOSIG00000003878) ndufa4a (ENSOSIG00000011648) ##22 ENSOSIG00000011643 Japanese Medaka HdrR MODERN SPECIES 22 hsd3b7 (ENSORLG00000025667) ccdc47 (ENSORLG00000002246) DCAF7 (ENSORLG00000002269) kcnh6a (ENSORLG00000002317) gfap (ENSORLG00000002346) MAP3K3 (ENSORLG00000002357) limd2 (ENSORLG00000023454) ddx42 (ENSORLG00000002395) strada (ENSORLG00000002426) rnf113a (ENSORLG00000002442) RUNDC3A (ENSORLG00000002487) ##20 ENSORLG00000022546 ENSORLG00000024605 ENSORLG00000002499 ##21 slc35b1 (ENSORLG00000002514) ndufa4a (ENSORLG00000002522) ##22 NXPH3 (ENSORLG00000027745) ##25 ENSORLG00000002533 ##32 ENSORLG00000002537 selenow2b (ENSORLG00000022585) slc4a1a (ENSORLG00000002557) ##33 ubtf (ENSORLG00000002593) ENSORLG00000002605 tmub2 (ENSORLG00000002612) asb16 (ENSORLG00000002620) ENSORLG00000029612 ENSORLG00000002626 asic2 (ENSORLG00000002768) MPP3 (ENSORLG00000002793) ENSORLG00000024122 ZNF281 (ENSORLG00000002799) Oryzias_b ANCESTRAL SPECIES 11 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00980000200496 ENSGT01100000264505 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000165535 ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a ENSGT00940000161586.c Javanese ricefish MODERN SPECIES 22 ENSOJAG00000014791 ccdc47 (ENSOJAG00000014553) DCAF7 (ENSOJAG00000014528) kcnh6a (ENSOJAG00000014494) gfap (ENSOJAG00000014458) MAP3K3 (ENSOJAG00000014122) limd2 (ENSOJAG00000014089) ddx42 (ENSOJAG00000013862) strada (ENSOJAG00000013385) rnf113a (ENSOJAG00000013338) ENSOJAG00000013331 ENSOJAG00000013328 RUNDC3A (ENSOJAG00000013280) ##20 ENSOJAG00000013271 ##21 slc35b1 (ENSOJAG00000013159) ndufa4a (ENSOJAG00000013130) ##22 NXPH3 (ENSOJAG00000013124) ##25 NGFR (ENSOJAG00000013065) ##32 ENSOJAG00000013060 selenow2b (ENSOJAG00000013038) slc4a1a (ENSOJAG00000012115) ##33 ubtf (ENSOJAG00000012079) ENSOJAG00000012046 ENSOJAG00000012037 asb16 (ENSOJAG00000012029) ENSOJAG00000012006 ENSOJAG00000012000 ENSOJAG00000011985 asic2 (ENSOJAG00000011839) MPP3 (ENSOJAG00000011690) ENSOJAG00000011658 Indian medaka MODERN SPECIES 9 ENSOMEG00000019732 ccdc47 (ENSOMEG00000019796) DCAF7 (ENSOMEG00000019835) kcnh6a (ENSOMEG00000019871) gfap (ENSOMEG00000019912) MAP3K3 (ENSOMEG00000020000) limd2 (ENSOMEG00000020039) ddx42 (ENSOMEG00000020093) strada (ENSOMEG00000020155) rnf113a (ENSOMEG00000020197) ENSOMEG00000020212 ENSOMEG00000020221 RUNDC3A (ENSOMEG00000020257) ##20 ENSOMEG00000020276 ##21 slc35b1 (ENSOMEG00000020317) ndufa4a (ENSOMEG00000020343) ##22 NXPH3 (ENSOMEG00000020355) ##25 ENSOMEG00000020420 ##32 ENSOMEG00000020433 selenow2b (ENSOMEG00000020458) slc4a1a (ENSOMEG00000020519) ##33 ubtf (ENSOMEG00000020580) tmub2 (ENSOMEG00000020595) ENSOMEG00000020693 asb16 (ENSOMEG00000020735) ENSOMEG00000020806 ENSOMEG00000020825 asic2 (ENSOMEG00000020866) MPP3 (ENSOMEG00000020973) ENSOMEG00000021099 ENSOMEG00000000555 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Eupercaria ANCESTRAL SPECIES 3 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Tetraodontidae ANCESTRAL SPECIES 8 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00940000161586.c ENSGT01080000257365.b.a.a.b.b.f Fugu MODERN SPECIES 17 ENSTRUG00000008953 ccdc47 (ENSTRUG00000009192) DCAF7 (ENSTRUG00000009387) kcnh6a (ENSTRUG00000009514) gfap (ENSTRUG00000009954) MAP3K3 (ENSTRUG00000010417) limd2 (ENSTRUG00000022099) ddx42 (ENSTRUG00000010711) strada (ENSTRUG00000011020) rnf113a (ENSTRUG00000011142) ENSTRUG00000020260 ENSTRUG00000024206 RUNDC3A (ENSTRUG00000011302) ##20 ENSTRUG00000011482 ##21 slc35b1 (ENSTRUG00000011550) ndufa4a (ENSTRUG00000001634) ##22 ENSTRUG00000028936 NXPH3 (ENSTRUG00000029641) ##25 NGFR (ENSTRUG00000026109) ##32 ENSTRUG00000031484 ENSTRUG00000020422 selenow2b (ENSTRUG00000023497) slc4a1a (ENSTRUG00000016704) ##33 ubtf (ENSTRUG00000016692) ENSTRUG00000016684 asb16 (ENSTRUG00000016674) ENSTRUG00000024866 asic2 (ENSTRUG00000016649) MPP3 (ENSTRUG00000016624) ENSTRUG00000031279 ENSTRUG00000027431 Tetraodon MODERN SPECIES 18 mylpfa (ENSTNIG00000014927) ##14 tbc1d10b (ENSTNIG00000014928) hsd3b7 (ENSTNIG00000014929) ENSTNIG00000014930 ccdc47 (ENSTNIG00000014931) DCAF7 (ENSTNIG00000014932) kcnh6a (ENSTNIG00000014933) gfap (ENSTNIG00000014934) MAP3K3 (ENSTNIG00000014935) ddx42 (ENSTNIG00000014936) strada (ENSTNIG00000014937) rnf113a (ENSTNIG00000014938) RUNDC3A (ENSTNIG00000014939) ##20 FAM117A (ENSTNIG00000014940) ##21 slc35b1 (ENSTNIG00000014941) ndufa4a (ENSTNIG00000014942) ##22 NXPH3 (ENSTNIG00000000954) ##25 NGFR (ENSTNIG00000001010) ##32 ENSTNIG00000014943 asic2 (ENSTNIG00000014944) MPP3 (ENSTNIG00000014945) ZNF281 (ENSTNIG00000016430) ENSTNIG00000014946 tmem98 (ENSTNIG00000014947) ENSTNIG00000014948 ENSTNIG00000014949 retsat.2 (ENSTNIG00000014950) nmt1a (ENSTNIG00000014951) plcd3a (ENSTNIG00000014952) hexim1 (ENSTNIG00000000815) ARHGAP23 (ENSTNIG00000005877) Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Ballan wrasse MODERN SPECIES 650 emc10 (ENSLBEG00000001036) zgc:195001 (ENSLBEG00000001005) ENSLBEG00000000992 ENSLBEG00000000979 tbc1d17 (ENSLBEG00000000966) ccndx (ENSLBEG00000000929) nucb1 (ENSLBEG00000000856) GFAP (ENSLBEG00000000796) kcnh6a (ENSLBEG00000000735) slc35b1 (ENSLBEG00000000681) ndufa4a (ENSLBEG00000000533) ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Perciformes ANCESTRAL SPECIES 1 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a.d ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Cottioidei ANCESTRAL SPECIES 1 ENSGT00950000183047.c.a.a ENSGT00940000168178 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT01100000263610 ENSGT01100000263643 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a.c ##24 ENSGT00940000154376.a.a.d ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000165535 ENSGT00940000154991.a.a ENSGT00940000157190.c Stickleback MODERN SPECIES 10 trip10a (ENSGACG00000009854) ENSGACG00000009852 ENSGACG00000009845 DCAF7 (ENSGACG00000009828) kcnh6a (ENSGACG00000009821) gfap (ENSGACG00000009804) MAP3K3 (ENSGACG00000009795) limd2 (ENSGACG00000009791) ddx42 (ENSGACG00000009782) strada (ENSGACG00000009767) rnf113a (ENSGACG00000009738) ENSGACG00000009736 RUNDC3A (ENSGACG00000009722) ##20 FAM117A (ENSGACG00000009718) ##21 slc35b1 (ENSGACG00000009684) ndufa4a (ENSGACG00000009661) ##22 ENSGACG00000009657 ENSGACG00000009655 ##25 NGFR (ENSGACG00000009652) ##32 slc4a1a (ENSGACG00000009622) ##33 ubtf (ENSGACG00000009598) ENSGACG00000009590 tmub2 (ENSGACG00000009587) asb16 (ENSGACG00000009576) ENSGACG00000009570 asic2 (ENSGACG00000009558) MPP3 (ENSGACG00000009540) ZNF281 (ENSGACG00000009536) ENSGACG00000009533 tmem98 (ENSGACG00000009522) ENSGACG00000009487 Lumpfish MODERN SPECIES 23 ENSCLMG00005015209 angptl6 (ENSCLMG00005015121) DCAF7 (ENSCLMG00005015120) kcnh6a (ENSCLMG00005015117) gfap (ENSCLMG00005015113) MAP3K3 (ENSCLMG00005015096) limd2 (ENSCLMG00005015095) ddx42 (ENSCLMG00005014996) strada (ENSCLMG00005014983) rnf113a (ENSCLMG00005014930) ENSCLMG00005014929 ENSCLMG00005014928 RUNDC3A (ENSCLMG00005014927) ##20 FAM117A (ENSCLMG00005014915) ##21 slc35b1 (ENSCLMG00005014726) ndufa4a (ENSCLMG00005014720) ##22 SPOP (ENSCLMG00005014718) ##24 spop (ENSCLMG00005014716) ##24 NXPH3 (ENSCLMG00005014715) ##25 NGFR (ENSCLMG00005014714) ##32 ENSCLMG00005014711 ENSCLMG00005014709 slc4a1a (ENSCLMG00005013342) ##33 ubtf (ENSCLMG00005013023) ENSCLMG00005013020 tmub2 (ENSCLMG00005013018) asb16 (ENSCLMG00005013016) ENSCLMG00005013013 ENSCLMG00005013012 asic2 (ENSCLMG00005013010) MPP3 (ENSCLMG00005012989) Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a.d ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Channel bull blenny MODERN SPECIES 22 ccdc47 (ENSCGOG00000004687) DCAF7 (ENSCGOG00000004624) kcnh6a (ENSCGOG00000004617) gfap (ENSCGOG00000004614) ENSCGOG00000004612 limd2 (ENSCGOG00000004609) ddx42 (ENSCGOG00000004012) strada (ENSCGOG00000003854) rnf113a (ENSCGOG00000023457) ENSCGOG00000023450 ENSCGOG00000023449 ENSCGOG00000023448 RUNDC3A (ENSCGOG00000023413) ##20 FAM117A (ENSCGOG00000023408) ##21 slc35b1 (ENSCGOG00000023354) ndufa4a (ENSCGOG00000023344) ##22 spop (ENSCGOG00000023334) ##24 NXPH3 (ENSCGOG00000023332) ##25 NGFR (ENSCGOG00000023326) ##32 slc4a1a (ENSCGOG00000023201) ##33 ubtf (ENSCGOG00000023089) ENSCGOG00000023085 tmub2 (ENSCGOG00000023084) asb16 (ENSCGOG00000023082) ENSCGOG00000023079 ENSCGOG00000023077 asic2 (ENSCGOG00000023060) MPP3 (ENSCGOG00000022997) ZNF281 (ENSCGOG00000022991) ENSCGOG00000022989 tmem98 (ENSCGOG00000022986) Pike perch MODERN SPECIES 35 ENSSLUG00000019723 ccdc47 (ENSSLUG00000019745) DCAF7 (ENSSLUG00000019921) kcnh6a (ENSSLUG00000019924) gfap (ENSSLUG00000019933) MAP3K3 (ENSSLUG00000020016) limd2 (ENSSLUG00000020066) ddx42 (ENSSLUG00000020081) strada (ENSSLUG00000020115) rnf113a (ENSSLUG00000020241) RUNDC3A (ENSSLUG00000020264) ##20 ENSSLUG00000020302 ENSSLUG00000020304 FAM117A (ENSSLUG00000005353) ##21 slc35b1 (ENSSLUG00000005412) ndufa4a (ENSSLUG00000005761) ##22 spop (ENSSLUG00000005769) ##24 NXPH3 (ENSSLUG00000005780) ##25 NGFR (ENSSLUG00000005786) ##32 ENSSLUG00000005801 ENSSLUG00000005814 selenow2b (ENSSLUG00000005817) slc4a1a (ENSSLUG00000005887) ##33 ubtf (ENSSLUG00000006660) atxn7l3a (ENSSLUG00000008615) #35 tmub2 (ENSSLUG00000008624) asb16 (ENSSLUG00000008631) ENSSLUG00000008643 asic2 (ENSSLUG00000008655) MPP3 (ENSSLUG00000008728) ZNF281 (ENSSLUG00000009419) Eupecaria_C ANCESTRAL SPECIES 25 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Gilthead seabream MODERN SPECIES 15 tbc1d10b (ENSSAUG00010024483) hsd3b7 (ENSSAUG00010024486) ENSSAUG00010024488 ccdc47 (ENSSAUG00010024494) DCAF7 (ENSSAUG00010024537) kcnh6a (ENSSAUG00010024541) gfap (ENSSAUG00010024635) MAP3K3 (ENSSAUG00010024637) limd2 (ENSSAUG00010024673) ddx42 (ENSSAUG00010024680) strada (ENSSAUG00010024692) rnf113a (ENSSAUG00010024843) RUNDC3A (ENSSAUG00010024854) ##20 FAM117A (ENSSAUG00010024859) ##21 slc35b1 (ENSSAUG00010024861) NDUFA4 (ENSSAUG00010024913) ##22 spop (ENSSAUG00010024916) ##24 NXPH3 (ENSSAUG00010024922) ##25 ENSSAUG00010024923 ##32 ENSSAUG00010024925 selenow2b (ENSSAUG00010024926) slc4a1a (ENSSAUG00010024983) ##33 ubtf (ENSSAUG00010026035) ENSSAUG00010026044 tmub2 (ENSSAUG00010011994) asb16 (ENSSAUG00010011996) ENSSAUG00010011999 asic2 (ENSSAUG00010012013) MPP3 (ENSSAUG00010012740) ENSSAUG00010013575 ZNF281 (ENSSAUG00010013577) Eupercaria_incertae_sedis ANCESTRAL SPECIES 23 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Large yellow croaker MODERN SPECIES 483 ENSLCRG00005002997 ccdc47 (ENSLCRG00005003015) DCAF7 (ENSLCRG00005003584) kcnh6a (ENSLCRG00005003592) gfap (ENSLCRG00005003602) MAP3K3 (ENSLCRG00005003683) limd2 (ENSLCRG00005003687) ddx42 (ENSLCRG00005003693) strada (ENSLCRG00005003724) rnf113a (ENSLCRG00005003735) RUNDC3A (ENSLCRG00005003918) ##20 ENSLCRG00005004082 ENSLCRG00005004083 FAM117A (ENSLCRG00005004085) ##21 slc35b1 (ENSLCRG00005004094) ndufa4a (ENSLCRG00005004097) ##22 spop (ENSLCRG00005004099) ##24 NXPH3 (ENSLCRG00005004113) ##25 NGFR (ENSLCRG00005004114) ##32 ENSLCRG00005004115 ENSLCRG00005004116 selenow2b (ENSLCRG00005004118) slc4a1a (ENSLCRG00005004134) ##33 ubtf (ENSLCRG00005007204) ENSLCRG00005007268 ENSLCRG00005007269 tmub2 (ENSLCRG00005007274) asb16 (ENSLCRG00005007277) ENSLCRG00005007280 ENSLCRG00005007285 asic2 (ENSLCRG00005007289) Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Zig-zag eel MODERN SPECIES 22 hsd3b7 (ENSMAMG00000026639) ENSMAMG00000026851 ccdc47 (ENSMAMG00000021865) ENSMAMG00000021872 kcnh6a (ENSMAMG00000021877) gfap (ENSMAMG00000021880) ENSMAMG00000021883 limd2 (ENSMAMG00000027978) ddx42 (ENSMAMG00000021888) strada (ENSMAMG00000021891) rnf113a (ENSMAMG00000021895) ENSMAMG00000021900 ##20 ENSMAMG00000021902 ENSMAMG00000021903 FAM117A (ENSMAMG00000021905) ##21 ndufa4a (ENSMAMG00000027103) ##22 spop (ENSMAMG00000024435) ##24 NXPH3 (ENSMAMG00000025415) ##25 NGFR (ENSMAMG00000021967) ##32 ENSMAMG00000021969 ENSMAMG00000028409 selenow2b (ENSMAMG00000021973) slc4a1a (ENSMAMG00000021975) ##33 ubtf (ENSMAMG00000021978) atxn7l3a (ENSMAMG00000021987) #35 tmub2 (ENSMAMG00000022000) asb16 (ENSMAMG00000022002) ENSMAMG00000022005 ENSMAMG00000022009 ENSMAMG00000022010 asic2 (ENSMAMG00000022013) Anabantoidei ANCESTRAL SPECIES 7 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a ENSGT00940000161586.c Siamese fighting fish MODERN SPECIES 19 hsd3b7 (ENSBSLG00000004134) ENSBSLG00000004123 ccdc47 (ENSBSLG00000003952) DCAF7 (ENSBSLG00000003896) kcnh6a (ENSBSLG00000003761) limd2 (ENSBSLG00000002990) ddx42 (ENSBSLG00000002910) strada (ENSBSLG00000002552) rnf113a (ENSBSLG00000002381) ENSBSLG00000002343 ENSBSLG00000002328 ENSBSLG00000002317 RUNDC3A (ENSBSLG00000002252) ##20 ENSBSLG00000002163 ##21 slc35b1 (ENSBSLG00000001723) ndufa4a (ENSBSLG00000001686) ##22 ENSBSLG00000019771 ##25 selenow2b (ENSBSLG00000019649) slc4a1a (ENSBSLG00000019645) ##33 ENSBSLG00000019639 ##33 NGFR (ENSBSLG00000019634) ##32 NGFR (ENSBSLG00000019630) ##32 ENSBSLG00000019621 selenow2b (ENSBSLG00000019617) slc4a1a (ENSBSLG00000018726) ##33 ubtf (ENSBSLG00000017490) atxn7l3a (ENSBSLG00000017326) #35 tmub2 (ENSBSLG00000017318) asb16 (ENSBSLG00000017302) ENSBSLG00000017248 asic2 (ENSBSLG00000016744) Climbing perch MODERN SPECIES 21 ccdc47 (ENSATEG00000022816) ENSATEG00000022830 kcnh6a (ENSATEG00000022847) gfap (ENSATEG00000022863) ENSATEG00000029387 limd2 (ENSATEG00000027118) ddx42 (ENSATEG00000022920) strada (ENSATEG00000029681) rnf113a (ENSATEG00000022950) ENSATEG00000022967 ##20 ENSATEG00000022989 ENSATEG00000022992 ENSATEG00000022994 FAM117A (ENSATEG00000022997) ##21 slc35b1 (ENSATEG00000023006) ndufa4a (ENSATEG00000025791) ##22 spop (ENSATEG00000026627) ##24 NXPH3 (ENSATEG00000029156) ##25 NGFR (ENSATEG00000023041) ##32 ENSATEG00000029254 selenow2b (ENSATEG00000023056) slc4a1a (ENSATEG00000023071) ##33 ubtf (ENSATEG00000023156) ATXN7L3 (ENSATEG00000027229) tmub2 (ENSATEG00000023276) asb16 (ENSATEG00000023280) ENSATEG00000023285 asic2 (ENSATEG00000023292) ENSATEG00000023295 ENSATEG00000023305 ENSATEG00000023310 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000160236 ENSGT00940000179983 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Carangaria_A ANCESTRAL SPECIES 28 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263643 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b.a ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b.g ENSGT00940000154991.a.a Seriola ANCESTRAL SPECIES 15 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT01100000263610 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b.a ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b.g ENSGT00940000154991.a.a Greater amberjack MODERN SPECIES 17 ccdc47 (ENSSDUG00000022154) DCAF7 (ENSSDUG00000022173) kcnh6a (ENSSDUG00000022184) gfap (ENSSDUG00000022194) MAP3K3 (ENSSDUG00000022201) limd2 (ENSSDUG00000022217) ddx42 (ENSSDUG00000022221) strada (ENSSDUG00000022236) rnf113a (ENSSDUG00000022244) RUNDC3A (ENSSDUG00000022256) ##20 ENSSDUG00000022261 ENSSDUG00000022264 ENSSDUG00000022266 FAM117A (ENSSDUG00000022268) ##21 slc35b1 (ENSSDUG00000022272) ndufa4a (ENSSDUG00000022275) ##22 spop (ENSSDUG00000022277) ##24 NXPH3 (ENSSDUG00000022289) ##25 NGFR (ENSSDUG00000022292) ##32 ENSSDUG00000022294 ENSSDUG00000022296 ENSSDUG00000022299 selenow2b (ENSSDUG00000022302) slc4a1a (ENSSDUG00000022306) ##33 ubtf (ENSSDUG00000022331) atxn7l3a (ENSSDUG00000022355) #35 tmub2 (ENSSDUG00000022375) asb16 (ENSSDUG00000022376) ENSSDUG00000022381 ENSSDUG00000022393 asic2 (ENSSDUG00000022395) Yellowtail amberjack MODERN SPECIES 2918 ccdc47 (ENSSLDG00000018287) DCAF7 (ENSSLDG00000018322) kcnh6a (ENSSLDG00000018349) gfap (ENSSLDG00000018376) MAP3K3 (ENSSLDG00000018411) limd2 (ENSSLDG00000018468) ddx42 (ENSSLDG00000018483) strada (ENSSLDG00000018525) rnf113a (ENSSLDG00000018582) RUNDC3A (ENSSLDG00000018597) ##20 ENSSLDG00000018613 ENSSLDG00000018619 ENSSLDG00000018628 FAM117A (ENSSLDG00000018636) ##21 slc35b1 (ENSSLDG00000018647) ndufa4a (ENSSLDG00000018674) ##22 spop (ENSSLDG00000018685) ##24 Barramundi perch MODERN SPECIES 152 ccdc47 (ENSLCAG00010005802) DCAF7 (ENSLCAG00010005906) kcnh6a (ENSLCAG00010005917) gfap (ENSLCAG00010005943) MAP3K3 (ENSLCAG00010005970) limd2 (ENSLCAG00010005992) ddx42 (ENSLCAG00010006017) strada (ENSLCAG00010006108) rnf113a (ENSLCAG00010006145) RUNDC3A (ENSLCAG00010006173) ##20 ENSLCAG00010006190 ENSLCAG00010006193 ENSLCAG00010006196 ENSLCAG00010006199 ##21 slc35b1 (ENSLCAG00010006204) ndufa4a (ENSLCAG00010006209) ##22 spop (ENSLCAG00010006224) ##24 NXPH3 (ENSLCAG00010006245) ##25 NGFR (ENSLCAG00010006249) ##32 ENSLCAG00010006257 selenow2b (ENSLCAG00010006266) slc4a1a (ENSLCAG00010006298) ##33 ubtf (ENSLCAG00010006392) ENSLCAG00010006414 tmub2 (ENSLCAG00010006418) asb16 (ENSLCAG00010006422) ENSLCAG00010006427 ENSLCAG00010006432 asic2 (ENSLCAG00010006437) Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00940000159805 ENSGT00940000160236 ENSGT00940000162290 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000167574 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00940000161586.c ENSGT01080000257365.b.a.a.b.b.f Tongue sole MODERN SPECIES 8 ccdc47 (ENSCSEG00000021603) DCAF7 (ENSCSEG00000021602) kcnh6a (ENSCSEG00000021601) gfap (ENSCSEG00000021600) MAP3K3 (ENSCSEG00000021599) limd2 (ENSCSEG00000021581) ddx42 (ENSCSEG00000021574) strada (ENSCSEG00000021572) rnf113a (ENSCSEG00000021570) ENSCSEG00000021569 ENSCSEG00000021568 ENSCSEG00000021567 RUNDC3A (ENSCSEG00000021566) ##20 ENSCSEG00000021564 ##21 slc35b1 (ENSCSEG00000021562) ndufa4a (ENSCSEG00000021561) ##22 ENSCSEG00000021559 ##25 NGFR (ENSCSEG00000021522) ##32 ENSCSEG00000021519 selenow2b (ENSCSEG00000021516) slc4a1a (ENSCSEG00000021512) ##33 ubtf (ENSCSEG00000021498) ENSCSEG00000021494 tmub2 (ENSCSEG00000021492) asb16 (ENSCSEG00000021489) ENSCSEG00000021486 ENSCSEG00000021483 olfm2a (ENSCSEG00000021480) ZNF385C (ENSCSEG00000021383) dhx58 (ENSCSEG00000021382) mlx (ENSCSEG00000021380) Turbot MODERN SPECIES 10 ENSSMAG00000012820 HLF (ENSSMAG00000012803) mmd (ENSSMAG00000012759) TMEM100 (ENSSMAG00000012748) PCTP (ENSSMAG00000012721) CBX2 (ENSSMAG00000022066) ENSSMAG00000012689 RBFOX3 (ENSSMAG00000012618) ENSSMAG00000012597 ENSSMAG00000012518 ENSSMAG00000012442 ENSSMAG00000012449 ENSSMAG00000023265 FAM117A (ENSSMAG00000012429) ##21 slc35b1 (ENSSMAG00000012406) ndufa4a (ENSSMAG00000018128) ##22 spop (ENSSMAG00000012241) ##24 ENSSMAG00000025110 NXPH3 (ENSSMAG00000012235) ##25 NGFR (ENSSMAG00000012202) ##32 ENSSMAG00000012187 selenow2b (ENSSMAG00000012167) slc4a1a (ENSSMAG00000012131) ##33 ubtf (ENSSMAG00000012016) ENSSMAG00000011961 tmub2 (ENSSMAG00000012009) asb16 (ENSSMAG00000011943) ENSSMAG00000011904 asic2 (ENSSMAG00000011371) ENSSMAG00000011253 ENSSMAG00000022986 Otomorpha ANCESTRAL SPECIES 36 ENSGT00390000013997 ENSGT00390000006939.i.a ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Otophysi ANCESTRAL SPECIES 46 ENSGT00940000160506.b ENSGT00940000159252.b.b ENSGT00940000160492 ENSGT00950000183143.c.b ENSGT00390000014062 ENSGT00940000154169.A.h ENSGT00940000158525.u ENSGT00940000165613 ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000177451 ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00940000154578.A.c.b.d ENSGT00940000157579.a ENSGT00940000157020.g.a ENSGT01050000244842.a.b.b.b Characiphysae ANCESTRAL SPECIES 11 ENSGT00940000160492 ENSGT00950000183143.c.b ENSGT00390000014062 ENSGT00940000163160.b.e.a ENSGT00940000159991.A.a ENSGT00940000154169.A.h ENSGT00940000158525.u ENSGT00940000165613 ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT01090000260029.a.a.b.a.b ENSGT00940000157579.a ENSGT00940000157020.g.a ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a.c.a ENSGT00940000156059 Channel catfish MODERN SPECIES 11 ENSIPUG00000001464 ENSIPUG00000001455 ENSIPUG00000001439 ENSIPUG00000001422 ENSIPUG00000001387 ENSIPUG00000001371 Cdipt (ENSIPUG00000001351) Maz (ENSIPUG00000001307) nlk.2 (ENSIPUG00000001284) fam57b (ENSIPUG00000001260) ENSIPUG00000001253 ENSIPUG00000001250 rundc3a (ENSIPUG00000001220) ##20 FAM117A (ENSIPUG00000001205) ##21 slc35b1 (ENSIPUG00000001169) ndufa4a (ENSIPUG00000024420) ##22 ENSIPUG00000024418 spop (ENSIPUG00000024416) ##24 nxph3 (ENSIPUG00000024402) ##25 ngfr (ENSIPUG00000024356) ##32 selenow2a (ENSIPUG00000024355) slc4a1 (ENSIPUG00000024349) ##33 UBTF (ENSIPUG00000024337) atxn7l3a (ENSIPUG00000024323) #35 Tmub2 (ENSIPUG00000024321) ENSIPUG00000024319 asb16 (ENSIPUG00000024318) ENSIPUG00000024315 ENSIPUG00000024313 vat1 (ENSIPUG00000024311) Rnd2 (ENSIPUG00000024310) Characiphysae_b ANCESTRAL SPECIES 30 ENSGT00940000160492 ENSGT00950000183143.c.b ENSGT00390000014062 ENSGT00940000163160.b.e.a ENSGT00940000159991.A.a ENSGT00940000154169.A.h ENSGT00940000158525.u ENSGT00940000165613 ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT01090000260029.a.a.b.a.b ENSGT00940000157579.a ENSGT00940000157020.g.a ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a.c.a Characoidei ANCESTRAL SPECIES 25 ENSGT00940000160492 ENSGT00950000183143.c.b ENSGT00390000014062 ENSGT00940000163160.b.e.a ENSGT00940000159991.A.a ENSGT00940000154169.A.h ENSGT00940000158525.u ENSGT00940000165613 ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT01090000260029.a.a.b.a.b ENSGT00940000157579.a ENSGT00940000157020.g.a ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a.c.a ENSGT00940000156059 Mexicana tetra MODERN SPECIES 45 slc35b1 (ENSAMXG00000032034) ndufa4a (ENSAMXG00000002982) ##22 spop (ENSAMXG00000003082) ##24 NXPH3 (ENSAMXG00000041514) ##25 NGFR (ENSAMXG00000040581) ##32 selenow2a (ENSAMXG00000033118) ENSAMXG00000030771 slc4a1a (ENSAMXG00000015300) ##33 ubtf (ENSAMXG00000035871) atxn7l3a (ENSAMXG00000038051) #35 tmub2 (ENSAMXG00000043336) asb16 (ENSAMXG00000015407) ENSAMXG00000032402 vat1 (ENSAMXG00000036949) ENSAMXG00000036024 rnd2 (ENSAMXG00000031503) MRC2 (ENSAMXG00000010776) Red-bellied piranha MODERN SPECIES 12 ENSPNAG00000003251 ENSPNAG00000003243 ENSPNAG00000014709 DOC2A (ENSPNAG00000014692) nupr1b (ENSPNAG00000014664) sgf29 (ENSPNAG00000014651) nfatc2ip (ENSPNAG00000014624) spns1 (ENSPNAG00000003183) atxn2l (ENSPNAG00000014538) RUNDC3A (ENSPNAG00000003123) ##20 ENSPNAG00000003106 ENSPNAG00000003101 ENSPNAG00000003099 FAM117A (ENSPNAG00000014371) ##21 slc35b1 (ENSPNAG00000014346) ndufa4a (ENSPNAG00000014314) ##22 spop (ENSPNAG00000014291) ##24 NXPH3 (ENSPNAG00000003045) ##25 NGFR (ENSPNAG00000014190) ##32 ENSPNAG00000003042 selenow2a (ENSPNAG00000014155) slc4a1a (ENSPNAG00000014118) ##33 ubtf (ENSPNAG00000013986) atxn7l3a (ENSPNAG00000013956) #35 tmub2 (ENSPNAG00000002993) asb16 (ENSPNAG00000013926) ENSPNAG00000002988 ENSPNAG00000002987 vat1 (ENSPNAG00000013902) rnd2 (ENSPNAG00000002981) MRC2 (ENSPNAG00000002977) Electric eel MODERN SPECIES 26 ENSEEEG00000002850 SEZ6L2 (ENSEEEG00000002847) kctd13 (ENSEEEG00000002845) hirip3 (ENSEEEG00000002844) ENSEEEG00000002044 ENSEEEG00000002034 cdipt (ENSEEEG00000002032) ENSEEEG00000002031 nlk1 (ENSEEEG00000001941) tlcd3ba (ENSEEEG00000001936) ENSEEEG00000001935 ENSEEEG00000001934 RUNDC3A (ENSEEEG00000001933) ##20 FAM117A (ENSEEEG00000001932) ##21 slc35b1 (ENSEEEG00000001929) ndufa4a (ENSEEEG00000001922) ##22 spop (ENSEEEG00000001915) ##24 NXPH3 (ENSEEEG00000001914) ##25 NGFR (ENSEEEG00000001912) ##32 ENSEEEG00000001911 slc4a1a (ENSEEEG00000001340) ##33 ubtf (ENSEEEG00000001321) atxn7l3a (ENSEEEG00000001319) #35 tmub2 (ENSEEEG00000001315) asb16 (ENSEEEG00000001314) ENSEEEG00000001312 vat1 (ENSEEEG00000001311) kcnc3a (ENSEEEG00000001309) zgc:193811 (ENSEEEG00000001308) lin7b (ENSEEEG00000001296) snrnp70 (ENSEEEG00000001295) Cyprinoidei ANCESTRAL SPECIES 65 ENSGT00940000160724 ENSGT00390000012014.B ENSGT00940000163160.b.d.a.b.a ENSGT00940000163160.b.d.a.b.b ENSGT00940000163160.b.d.a.a ENSGT00940000159991.A.a ENSGT00940000154169.A.h ENSGT00940000158525.u ENSGT00940000165613 ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00990000204783 ENSGT00960000187164 ENSGT00940000158922.d ##20 ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00390000010440.h ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00940000154578.A.c.b.d ENSGT00940000157579.a ENSGT00940000157020.g.a ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a.c.a Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 269 ENSGT00990000204783.d ENSGT00960000187164.d ENSGT00940000158922.d.d ##20 ENSGT00950000183046.a.b.l.a ##21 ENSGT00940000157900.p ENSGT00940000154268.k.a.c.a ##22 ENSGT00940000154376.a.a.b ##24 ENSGT00950000182883.a.a.a.d ##25 ENSGT00730000110974.a.d ##32 ENSGT00390000010440.g.a ENSGT00940000157423.a.a.c ##33 ENSGT00940000166349.n ENSGT00940000158253.db.a #35 ENSGT00390000014069.b.l ENSGT00940000154578.A.c.b.d.l ENSGT00940000157579.a.c ENSGT00940000157020.g.a.d ENSGT01050000244842.a.b.b.b.j ENSGT00950000182984.b.a.a.c.a.d ENSGT01090000259987.b.b.a.a.a.a.d ENSGT00390000010523.c.a.h Goldfish MODERN SPECIES 22 igf2bp1 (ENSCARG00000002510) ENSCARG00000002477 nr1d1 (ENSCARG00000002466) casc3 (ENSCARG00000002400) PPP1R9B (ENSCARG00000002312) col1a1a (ENSCARG00000001155) ENSCARG00000000938 ENSCARG00000000931 ENSCARG00000000924 lsm12a (ENSCARG00000000913) HDAC5 (ENSCARG00000000629) cyb561 (ENSCARG00000000547) TANC2 (ENSCARG00000000490) FAM117A (ENSCARG00000000466) ##21 slc35b1 (ENSCARG00000000376) ndufa4a (ENSCARG00000000245) ##22 spop (ENSCARG00000000195) ##24 NXPH3 (ENSCARG00000000141) ##25 NGFR (ENSCARG00000000128) ##32 ENSCARG00000019181 slc4a1a (ENSCARG00000019139) ##33 ubtf (ENSCARG00000018560) atxn7l3a (ENSCARG00000018502) #35 tmub2 (ENSCARG00000018495) ENSCARG00000018487 vat1 (ENSCARG00000018475) rnd2 (ENSCARG00000018465) MRC2 (ENSCARG00000018238) tlk2 (ENSCARG00000018108) mettl2a (ENSCARG00000017995) itgb3a (ENSCARG00000017844) Cyprininae_a ANCESTRAL SPECIES 113 ENSGT00940000158922.d.d ##20 ENSGT00950000183046.a.b.l.a ##21 ENSGT00940000157900.p ENSGT00940000154268.k.a.c.a ##22 ENSGT00940000154376.a.a.b ##24 ENSGT00950000182883.a.a.a.d ##25 ENSGT00730000110974.a.d ##32 ENSGT00390000010440.g.a ENSGT00940000157423.a.a.c ##33 ENSGT00940000166349.n ENSGT00940000158253.db.a #35 ENSGT00390000014069.b.l ENSGT00940000160773.h ENSGT00940000154578.A.c.b.d.l ENSGT00940000157579.a.c ENSGT00940000157020.g.a.d ENSGT01050000244842.a.b.b.b.j ENSGT00950000182984.b.a.a.c.a.d ENSGT00940000156059.o Golden-line barbel MODERN SPECIES 47 syngr1a (ENSSGRG00000047651) tcap (ENSSGRG00000047650) zgc:153968 (ENSSGRG00000047649) zgc:112038 (ENSSGRG00000047647) zgc:123295 (ENSSGRG00000047389) ENSSGRG00000046900 cdipt (ENSSGRG00000046889) ENSSGRG00000046888 nlk1 (ENSSGRG00000046656) tlcd3ba (ENSSGRG00000046653) ENSSGRG00000046652 ENSSGRG00000046651 RUNDC3A (ENSSGRG00000046650) ##20 ENSSGRG00000046648 slc35b1 (ENSSGRG00000046371) ndufa4a (ENSSGRG00000046359) ##22 spop (ENSSGRG00000046357) ##24 Cyprininae ANCESTRAL SPECIES 24 ENSGT00950000182935.B.b.c.s.a ENSGT00390000012014.B.s ENSGT00940000163160.b.d.a.a.a.a.a ENSGT00940000163160.b.d.a.b.b ENSGT00940000163160.b.d.a.a.b.a ENSGT00940000159991.A.a.s.a ENSGT00940000154169.A.h.i ENSGT00940000158525.u.b ENSGT00940000165613.a ENSGT01010000222313.A.b.b.a.a.b.a ENSGT00940000158922.d.c ##20 ENSGT00990000204783.c ENSGT00960000187164.c ENSGT00950000183046.a.b.l.b ##21 ENSGT00940000157900.o ENSGT00940000154268.k.a.c.b ##22 ENSGT00940000154376.a.a.a ##24 ENSGT00950000182883.a.a.a.c ##25 ENSGT00730000110974.a.c ##32 ENSGT00940000177451.a ENSGT00940000177451.b ENSGT00940000157423.a.a.d ##33 ENSGT00940000166349.m ENSGT00940000158253.db.b #35 ENSGT00390000014069.b.k ENSGT00940000160773 ENSGT00940000154578.A.c.b.d.k ENSGT00940000157579.a.d ENSGT00940000157020.g.a.c ENSGT01050000244842.a.b.b.b.i ENSGT00950000182984.b.a.a.c.a.c Cyprininae_a ANCESTRAL SPECIES 12 ENSGT00940000163160.b.d.a.a.a.a.a ENSGT00940000163160.b.d.a.b.b ENSGT00940000163160.b.d.a.a.b.a ENSGT00940000159991.A.a.s.a ENSGT00940000154169.A.h.i ENSGT00940000158525.u.b ENSGT00940000165613.a ENSGT01010000222313.A.b.b.a.a.b.a.d ENSGT00990000204783.d ENSGT00960000187164.d ENSGT00940000165613.b.b ENSGT01010000222313.A.b.b.a.a.b.a.c ENSGT00940000158922.d.c ##20 ENSGT00950000183046.a.b.l.b ##21 ENSGT00940000157900.o ENSGT00940000154268.k.a.c.b ##22 ENSGT00940000154376.a.a.a ##24 ENSGT00950000182883.a.a.a.c ##25 ENSGT00730000110974.a.c ##32 ENSGT00940000177451.a ENSGT00940000177451.b ENSGT00940000157423.a.a.d ##33 ENSGT00940000166349.m ENSGT00940000158253.db.b #35 ENSGT00390000014069.b.k ENSGT00940000160773.g ENSGT00940000154578.A.c.b.d.k ENSGT00940000157579.a.d ENSGT00940000157020.g.a.c ENSGT01050000244842.a.b.b.b.i ENSGT00950000182984.b.a.a.c.a.c Common carp reference MODERN SPECIES 1 cdc27 (ENSCCRG00000010357) ENSCCRG00000050972 ENSCCRG00000040546 itga2b (ENSCCRG00000040552) ENSCCRG00000072003 tcap (ENSCCRG00000058197) zgc:123295 (ENSCCRG00000053214) zgc:112038 (ENSCCRG00000037376) zgc:123295 (ENSCCRG00000075360) ENSCCRG00000029846 ENSCCRG00000058911 nlk1 (ENSCCRG00000029985) ENSCCRG00000039928 ##20 FAM117A (ENSCCRG00000039941) ##21 slc35b1 (ENSCCRG00000039955) ndufa4a (ENSCCRG00000064261) ##22 spop (ENSCCRG00000070256) ##24 NXPH3 (ENSCCRG00000061205) ##25 NGFR (ENSCCRG00000008669) ##32 selenow2a (ENSCCRG00000082469) selenow2b (ENSCCRG00000065161) slc4a1a (ENSCCRG00000010545) ##33 ubtf (ENSCCRG00000015544) atxn7l3a (ENSCCRG00000017230) #35 tmub2 (ENSCCRG00000008660) asb16 (ENSCCRG00000017234) ENSCCRG00000017238 vat1 (ENSCCRG00000058207) ENSCCRG00000065467 rnd2 (ENSCCRG00000077623) ENSCCRG00000032612 Golden-line barbel MODERN SPECIES 132 FAM171A2 (ENSSGRG00000022722) syngr1a (ENSSGRG00000022724) tcap (ENSSGRG00000022726) zgc:123295 (ENSSGRG00000022731) zgc:112038 (ENSSGRG00000022737) zgc:123295 (ENSSGRG00000022746) ENSSGRG00000023217 cdipt (ENSSGRG00000025911) ENSSGRG00000025912 nlk1 (ENSSGRG00000025913) tlcd3ba (ENSSGRG00000025915) RUNDC3A (ENSSGRG00000025919) ##20 ENSSGRG00000026061 ENSSGRG00000026062 slc35b1 (ENSSGRG00000026072) ndufa4a (ENSSGRG00000026329) ##22 spop (ENSSGRG00000026330) ##24 NXPH3 (ENSSGRG00000026346) ##25 arpc3 (ENSSGRG00000026347) gpn3 (ENSSGRG00000026363) DNM1L (ENSSGRG00000026381) tnnt2d (ENSSGRG00000026548) ENSSGRG00000026549 bpgm (ENSSGRG00000026553) ENSSGRG00000026554 ENSSGRG00000026556 ENSSGRG00000026562 zgc:136858 (ENSSGRG00000026564) CNOT4 (ENSSGRG00000026568) KCNA1 (ENSSGRG00000026856) kcna6a (ENSSGRG00000026857) Goldfish MODERN SPECIES 20 syngr1a (ENSCARG00000014150) tcap (ENSCARG00000014155) zgc:123295 (ENSCARG00000014161) zgc:112038 (ENSCARG00000014168) zgc:123295 (ENSCARG00000014174) ENSCARG00000014184 cdipt (ENSCARG00000014413) ENSCARG00000014426 nlk1 (ENSCARG00000014437) tlcd3ba (ENSCARG00000014509) RUNDC3A (ENSCARG00000014516) ##20 ENSCARG00000014535 ENSCARG00000014537 FAM117A (ENSCARG00000014543) ##21 slc35b1 (ENSCARG00000014573) ndufa4a (ENSCARG00000015466) ##22 spop (ENSCARG00000015476) ##24 NXPH3 (ENSCARG00000015485) ##25 ENSCARG00000015486 NGFR (ENSCARG00000015495) ##32 selenow2a (ENSCARG00000015514) selenow2b (ENSCARG00000015527) slc4a1a (ENSCARG00000015560) ##33 ubtf (ENSCARG00000015828) atxn7l3a (ENSCARG00000015976) #35 tmub2 (ENSCARG00000016031) asb16 (ENSCARG00000016042) ENSCARG00000016050 vat1 (ENSCARG00000016057) rnd2 (ENSCARG00000016068) ENSCARG00000016088 Cyprininae ANCESTRAL SPECIES ENSGT00940000154268.k.a.d ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154268.k.a.d ##22 Common carp reference MODERN SPECIES 3 ENSCCRG00000060717 ENSCCRG00000057209 ENSCCRG00000070736 ENSCCRG00000024420 ENSCCRG00000078937 ENSCCRG00000040560 tcap (ENSCCRG00000076036) zgc:123295 (ENSCCRG00000028123) ENSCCRG00000037739 ENSCCRG00000056548 nlk1 (ENSCCRG00000039894) tlcd3ba (ENSCCRG00000062094) ENSCCRG00000049848 ##20 FAM117A (ENSCCRG00000070826) ##21 slc35b1 (ENSCCRG00000049949) ndufa4a (ENSCCRG00000050500) ##22 spop (ENSCCRG00000011772) ##24 NXPH3 (ENSCCRG00000037538) ##25 NGFR (ENSCCRG00000011220) ##32 selenow2a (ENSCCRG00000067963) slc4a1a (ENSCCRG00000077482) ##33 ubtf (ENSCCRG00000008775) atxn7l3a (ENSCCRG00000008754) #35 tmub2 (ENSCCRG00000080193) asb16 (ENSCCRG00000008740) ENSCCRG00000061047 vat1 (ENSCCRG00000066633) rnd2 (ENSCCRG00000024725) MRC2 (ENSCCRG00000011390) tlk2 (ENSCCRG00000066124) mettl2a (ENSCCRG00000008201) Zebrafish MODERN SPECIES 18 itga2b (ENSDARG00000018687) FAM171A2 (ENSDARG00000075249) syngr1a (ENSDARG00000002564) tcap (ENSDARG00000007344) zgc:153968 (ENSDARG00000061858) zgc:112038 (ENSDARG00000046140) zgc:123295 (ENSDARG00000056324) ENSDARG00000074899 cdipt (ENSDARG00000070686) ENSDARG00000087330 nlk1 (ENSDARG00000006566) tlcd3ba (ENSDARG00000026875) RUNDC3A (ENSDARG00000007245) ##20 FAM117A (ENSDARG00000078640) ##21 slc35b1 (ENSDARG00000038213) ndufa4a (ENSDARG00000099499) ##22 spop (ENSDARG00000100519) ##24 NXPH3 (ENSDARG00000070694) ##25 NGFR (ENSDARG00000088708) ##32 selenow2a (ENSDARG00000038228) selenow2b (ENSDARG00000089936) slc4a1a (ENSDARG00000012881) ##33 ubtf (ENSDARG00000035066) atxn7l3a (ENSDARG00000029331) #35 tmub2 (ENSDARG00000056467) asb16 (ENSDARG00000056468) vat1 (ENSDARG00000056481) rnd2 (ENSDARG00000070735) MRC2 (ENSDARG00000078135) tlk2 (ENSDARG00000010779) mettl2a (ENSDARG00000008105) Clupeiformes ANCESTRAL SPECIES 155 ENSGT00390000013997 ENSGT00390000006939.i.a.f.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00950000183046.a.b.l.d ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154268.l ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253.t.b #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c Denticle herring MODERN SPECIES 17 ccdc47 (ENSDCDG00000004736) dcaf7 (ENSDCDG00000004761) kcnh6a (ENSDCDG00000004768) gfap (ENSDCDG00000004783) MAP3K3 (ENSDCDG00000004796) ENSDCDG00000004824 limd2 (ENSDCDG00000004827) ddx42 (ENSDCDG00000004861) rnf113a (ENSDCDG00000004923) RUNDC3A (ENSDCDG00000004935) ##20 ENSDCDG00000004970 ENSDCDG00000004971 ENSDCDG00000004972 ENSDCDG00000004973 ##21 slc35b1 (ENSDCDG00000004974) ndufa4a (ENSDCDG00000004976) ##22 spop (ENSDCDG00000004979) ##24 NXPH3 (ENSDCDG00000004980) ##25 NXPH3 (ENSDCDG00000004981) ##25 NGFR (ENSDCDG00000004984) ##32 selenow2a (ENSDCDG00000004988) ENSDCDG00000004992 slc4a1a (ENSDCDG00000004996) ##33 ubtf (ENSDCDG00000005186) ENSDCDG00000005213 ENSDCDG00000005216 MCOLN1 (ENSDCDG00000005225) ENSDCDG00000005316 pkn1b (ENSDCDG00000005321) ENSDCDG00000005425 ENSDCDG00000013934 Osteoglossocephalai ANCESTRAL SPECIES 182 ENSGT00940000159539 ENSGT00940000158767 ENSGT00390000012820 #18 ENSGT00940000158377.a ENSGT00940000164841 #19 ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00470000042293.a.b.a.a ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154376.a.a ##24 ENSGT00940000154268.l ##22 ENSGT00940000154376.b ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 Osteoglossiformes ANCESTRAL SPECIES 182 ENSGT00940000161435.a.b ENSGT00940000155761.d ENSGT00950000183060.a.b.a.a ENSGT00720000108863.l ENSGT00940000153560.b.a.a.n.a ENSGT00940000154244.A.a.a.k ENSGT00940000158767.c ENSGT00940000158377.a.a ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00960000187164.a ENSGT00960000187164.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.l ##22 ENSGT00940000154376.b.a ##24 ENSGT00950000182883.a.a.a.l ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440 ENSGT00940000157423.a.a ##33 ENSGT00940000166349.b ENSGT00940000158253.q #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b P. kingsleyae MODERN SPECIES 247 SDK2 (ENSPKIG00000017502) ttyh2l (ENSPKIG00000017373) CHMP6 (ENSPKIG00000017298) baiap2a (ENSPKIG00000017185) AATK (ENSPKIG00000017088) ENSPKIG00000017043 MAP3K3 (ENSPKIG00000016969) limd2 (ENSPKIG00000016934) strada (ENSPKIG00000016871) rnf113a (ENSPKIG00000016796) ENSPKIG00000016774 ENSPKIG00000016766 RUNDC3A (ENSPKIG00000016735) ##20 FAM117A (ENSPKIG00000016710) ##21 slc35b1 (ENSPKIG00000016666) NDUFA4 (ENSPKIG00000016641) ##22 spop (ENSPKIG00000016581) ##24 NXPH3 (ENSPKIG00000016538) ##25 ENSPKIG00000016524 NGFR (ENSPKIG00000016506) ##32 selenow2b (ENSPKIG00000016480) slc4a1a (ENSPKIG00000016452) ##33 ENSPKIG00000016436 ubtf (ENSPKIG00000016332) atxn7l3a (ENSPKIG00000016201) #35 tmub2 (ENSPKIG00000016147) asb16 (ENSPKIG00000016135) ENSPKIG00000016113 ENSPKIG00000016098 Asian bonytongue MODERN SPECIES 23 ttyh2l (ENSSFOG00015016972) chmp6b (ENSSFOG00015016941) baiap2a (ENSSFOG00015016793) ENSSFOG00015016933 AATK (ENSSFOG00015016763) ENSSFOG00015029648 MAP3K3 (ENSSFOG00015016689) limd2 (ENSSFOG00015016703) strada (ENSSFOG00015025923) rnf113a (ENSSFOG00015016567) RUNDC3A (ENSSFOG00015016499) ##20 ENSSFOG00015016552 ENSSFOG00015016544 FAM117A (ENSSFOG00015016478) ##21 slc35b1 (ENSSFOG00015016456) ENSSFOG00015027801 ##22 spop (ENSSFOG00015016399) ##24 NXPH3 (ENSSFOG00015016381) ##25 NGFR (ENSSFOG00015016350) ##32 ENSSFOG00015026652 slc4a1a (ENSSFOG00015015889) ##33 ubtf (ENSSFOG00015015780) atxn7l3a (ENSSFOG00015029661) #35 tmub2 (ENSSFOG00015032013) asb16 (ENSSFOG00015015656) ENSSFOG00015015608 asic2 (ENSSFOG00015015505) MPP3 (ENSSFOG00015015439) xylt1 (ENSSFOG00015015407) rps15a (ENSSFOG00015032835) arl6ip1 (ENSSFOG00015015380) Clupeocephala ANCESTRAL SPECIES ENSGT00940000154268.l ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154268.l ##22 Protacanthopterygii ANCESTRAL SPECIES 8 ENSGT00390000013997 ENSGT00390000006939.i.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00980000200496 ENSGT01090000260346 ENSGT00940000158922.d ##20 ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900 ENSGT00940000154268.l ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b ENSGT00390000010440.g.a ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00390000001488 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1737 ENSGT00940000157900.n ENSGT00940000154268.l.a ##22 Salmoninae_a ANCESTRAL SPECIES 347 ENSGT00950000183046.a.b.l.g ##21 ENSGT00940000157900.n ENSGT00940000154268.l.a ##22 Oncorhynchus ANCESTRAL SPECIES 71 ENSGT00940000165921.g.a.a ENSGT00940000159539.m ENSGT00940000158767.g.a.a.b ENSGT00940000158377.a.c ENSGT00940000156559.o ENSGT00940000158827.cb ENSGT00390000016292.c.b ENSGT00940000158922.d.g.a ##20 ENSGT00940000164651.b.b ENSGT00950000183046.a.b.l.h ##21 ENSGT00940000157900.m ENSGT00940000154268.l.b ##22 ENSGT00940000164651.b.a ENSGT00950000183046.a.b.l.g ##21 ENSGT00940000157900.n ENSGT00940000154268.l.a ##22 ENSGT00940000154376.a.a.g.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a.i ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b.a.a ENSGT00940000177451 ENSGT00940000157423.a.a.o ##33 ENSGT00940000166349.i.b ENSGT00940000158253.yc.b #35 ENSGT00390000014069.b.f ENSGT00940000160773.f.b ENSGT00400000022305.g.a ENSGT00940000154991.a.b.d ENSGT00940000154991.a.a.e.a ENSGT00390000001488 Rainbow trout MODERN SPECIES 3 ccdc47 (ENSOMYG00000004797) ENSOMYG00000004972 kcnh2 (ENSOMYG00000004984) gfap (ENSOMYG00000005249) ENSOMYG00000005900 limd2 (ENSOMYG00000006198) ddx42 (ENSOMYG00000006634) rnf113a (ENSOMYG00000007366) strada (ENSOMYG00000007099) ENSOMYG00000007417 ##20 ENSOMYG00000007446 ENSOMYG00000007469 ENSOMYG00000007481 ENSOMYG00000007511 slc35b1 (ENSOMYG00000007708) ENSOMYG00000065517 ##22 spop (ENSOMYG00000007883) ##24 NXPH3 (ENSOMYG00000007928) ##25 NGFR (ENSOMYG00000007962) ##32 ENSOMYG00000008010 selenow2a (ENSOMYG00000069176) slc4a1a (ENSOMYG00000008303) ##33 ubtf (ENSOMYG00000008651) atxn7l3a (ENSOMYG00000008839) #35 tmub2 (ENSOMYG00000054590) asb16 (ENSOMYG00000008866) ENSOMYG00000008901 ENSOMYG00000075912 ENSOMYG00000071360 ENSOMYG00000009033 ENSOMYG00000009127 Oncorhynchus_a ANCESTRAL SPECIES 80 ENSGT00390000013997.o.b ENSGT00390000006939.i.b.a.a ENSGT00940000165921.g.a.b ENSGT00940000159539.n ENSGT00940000158767.g.a.a.a ENSGT00940000158377.a.d ENSGT00940000156559.p ENSGT00940000158827.bb ENSGT00390000016292.c.a.b ENSGT00940000158922.d.h ##20 ENSGT00980000200496.b ENSGT01090000260346.b.a.b ENSGT00940000164651.b.a ENSGT00950000183046.a.b.l.h ##21 ENSGT00940000157900.n.a ENSGT00940000154268.l.a ##22 Chinook salmon MODERN SPECIES 33 ENSOTSG00005008262 ccdc47 (ENSOTSG00005008268) DCAF7 (ENSOTSG00005008485) kcnh6a (ENSOTSG00005008487) gfap (ENSOTSG00005008489) MAP3K3 (ENSOTSG00005008494) limd2 (ENSOTSG00005008504) ddx42 (ENSOTSG00005008506) strada (ENSOTSG00005008876) RUNDC3A (ENSOTSG00005008877) ##20 ENSOTSG00005008883 ENSOTSG00005008884 ENSOTSG00005008885 FAM117A (ENSOTSG00005008887) ##21 slc35b1 (ENSOTSG00005008888) NDUFA4 (ENSOTSG00005008928) ##22 spop (ENSOTSG00005008929) ##24 NXPH3 (ENSOTSG00005008971) ##25 asic2 (ENSOTSG00005008972) trpm4a (ENSOTSG00005008975) ENSOTSG00005009009 ENSOTSG00005009029 ENSOTSG00005009030 ENSOTSG00005009032 ENSOTSG00005009033 crb3a (ENSOTSG00005009034) asf1ba (ENSOTSG00005009035) prkacaa (ENSOTSG00005009038) TECR (ENSOTSG00005009329) ENSOTSG00005009332 ENSOTSG00005009335 Coho salmon MODERN SPECIES 26 ccdc47 (ENSOKIG00005031385) DCAF7 (ENSOKIG00005031521) kcnh6a (ENSOKIG00005031550) gfap (ENSOKIG00005031825) MAP3K3 (ENSOKIG00005031851) limd2 (ENSOKIG00005031978) ddx42 (ENSOKIG00005032022) strada (ENSOKIG00005032199) rnf113a (ENSOKIG00005033056) RUNDC3A (ENSOKIG00005033098) ##20 ENSOKIG00005033537 ENSOKIG00005033543 ENSOKIG00005033550 FAM117A (ENSOKIG00005033565) ##21 slc35b1 (ENSOKIG00005033631) ENSOKIG00005033755 ##22 spop (ENSOKIG00005033765) ##24 NGFR (ENSOKIG00005033821) ##32 ENSOKIG00005033847 ENSOKIG00005033854 ENSOKIG00005033869 MIEN1 (ENSOKIG00005033874) selenow2a (ENSOKIG00005033900) slc4a1a (ENSOKIG00005033939) ##33 ubtf (ENSOKIG00005034233) ENSOKIG00005034716 atxn7l3a (ENSOKIG00005034724) #35 tmub2 (ENSOKIG00005034749) asb16 (ENSOKIG00005034758) ENSOKIG00005034763 ENSOKIG00005034772 Huchen MODERN SPECIES 622 kcnh6a (ENSHHUG00000040267) gfap (ENSHHUG00000040235) ENSHHUG00000040228 MAP3K3 (ENSHHUG00000040212) ENSHHUG00000040208 limd2 (ENSHHUG00000040206) ddx42 (ENSHHUG00000040165) strada (ENSHHUG00000040154) rnf113a (ENSHHUG00000040122) ENSHHUG00000040120 ENSHHUG00000040116 RUNDC3A (ENSHHUG00000040094) ##20 ENSHHUG00000040086 ENSHHUG00000040072 ##21 slc35b1 (ENSHHUG00000039966) ENSHHUG00000039951 ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000158377.a.c ENSGT00940000158767.g.a.a.a ENSGT00940000158377.a.d ENSGT00940000156559 ENSGT00940000158827.cb ENSGT00390000016292.c.b ENSGT00390000016292.d ENSGT00940000158827.bb ENSGT00390000016292.c.a ENSGT00980000200496.b ENSGT01090000260346.b.b ENSGT00940000158922.d ##20 ENSGT00940000164651.b ENSGT00950000183046.a.b.l ##21 ENSGT00940000157900.m ENSGT00940000154268.l.b ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b.a.b ENSGT00390000010440.g.a ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773.f.a ENSGT00400000022305.g.b ENSGT00940000160773.f.b ENSGT00400000022305.g.a ENSGT00940000154991.a.b Salmoninae_a ANCESTRAL SPECIES 37 ENSGT00940000158767.g.b ENSGT00940000158377.a.d ENSGT00940000156559 ENSGT00940000158827.cb ENSGT00390000016292.c.b ENSGT00390000016292.d ENSGT00940000158767.g.a.a.b ENSGT00940000158377.a.c ENSGT00940000158827.bb ENSGT00390000016292.c.a ENSGT00980000200496.b ENSGT00940000158922.d ##20 ENSGT00940000164651.b ENSGT00950000183046.a.b.l.h ##21 ENSGT00940000157900.m ENSGT00940000154268.l.b ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a.i ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b.a.a ENSGT00390000010440.g.b.a.b ENSGT00390000010440.g.a ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253 #35 ENSGT00390000014069.b ENSGT00940000160773.f.a ENSGT00400000022305.g.b ENSGT00940000160773.f.b ENSGT00400000022305.g.a Oncorhynchus ANCESTRAL SPECIES 71 ENSGT00940000160236.h ENSGT00940000162290.w ENSGT00390000013997.o.a ENSGT00390000006939.i.b.a.b ENSGT00940000165921.g.a.a ENSGT00940000159539.m ENSGT00940000158767.g.a.a.b ENSGT00940000158377.a.c ENSGT00940000156559.o ENSGT00940000158827.cb ENSGT00390000016292.c.b ENSGT00940000158922.d.g.a ##20 ENSGT00940000164651.b.b ENSGT00950000183046.a.b.l.h ##21 ENSGT00940000157900.m ENSGT00940000154268.l.b ##22 ENSGT00940000164651.b.a ENSGT00950000183046.a.b.l.g ##21 ENSGT00940000157900.n ENSGT00940000154268.l.a ##22 ENSGT00940000154376.a.a.g.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a.i ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b.a.a ENSGT00940000177451 ENSGT00940000157423.a.a.o ##33 ENSGT00940000166349.i.b ENSGT00940000158253.yc.b #35 ENSGT00390000014069.b.f ENSGT00940000160773.f.b Rainbow trout MODERN SPECIES 4 ENSOMYG00000004171 kcnh6a (ENSOMYG00000004255) gfap (ENSOMYG00000004442) ENSOMYG00000004693 limd2 (ENSOMYG00000004841) ENSOMYG00000067518 ddx42 (ENSOMYG00000004937) strada (ENSOMYG00000005612) rnf113a (ENSOMYG00000004364) ENSOMYG00000005959 ##20 ENSOMYG00000006091 ENSOMYG00000006102 ENSOMYG00000006123 FAM117A (ENSOMYG00000006145) ##21 slc35b1 (ENSOMYG00000006195) ndua4 (ENSOMYG00000007771) ##22 spop (ENSOMYG00000006388) ##24 ENSOMYG00000057878 ##31 NXPH3 (ENSOMYG00000006479) ##25 ENSOMYG00000077469 NGFR (ENSOMYG00000006619) ##32 ENSOMYG00000070398 ENSOMYG00000006655 ENSOMYG00000051649 selenow2a (ENSOMYG00000006692) slc4a1a (ENSOMYG00000006966) ##33 ubtf (ENSOMYG00000007387) atxn7l3a (ENSOMYG00000007563) #35 tmub2 (ENSOMYG00000007616) asb16 (ENSOMYG00000007634) ENSOMYG00000007658 Oncorhynchus_a ANCESTRAL SPECIES 62 ENSGT00390000013997.o.a ENSGT00390000006939.i.b.a.b ENSGT00940000165921.g.a.a.a ENSGT00940000159539.m ENSGT00940000158767.g.a.a.b ENSGT00940000158377.a.c ENSGT00940000156559.o ENSGT00940000158827.cb ENSGT00390000016292.c.a.a ENSGT00980000200496.a ENSGT01090000260346.b.a.a.a ENSGT00940000158922.d.g.a ##20 ENSGT00940000164651.b.b ENSGT00950000183046.a.b.l.g ##21 ENSGT00940000157900.n.b ENSGT00940000154268.l.b ##22 ENSGT00940000154376.a.a.g.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a.i.b ##32 ENSGT00940000162556.G.d.h.b.b ENSGT00390000010440.g.b.a.a ENSGT00940000177451 ENSGT00940000157423.a.a.o ##33 ENSGT00940000166349.i.b ENSGT00940000158253.yc.b #35 ENSGT00390000014069.b.f ENSGT00940000160773.f.b ENSGT00400000022305.g.a.a ENSGT00940000154991.a.b.d ENSGT00940000154991.a.a.e.a ENSGT00940000154991.a.a.f Chinook salmon MODERN SPECIES 23 emc6 (ENSOTSG00005025427) p2rx5 (ENSOTSG00005025428) ENSOTSG00005025429 ENSOTSG00005025430 ENSOTSG00005025432 ncor1 (ENSOTSG00005025454) zswim7 (ENSOTSG00005026972) adora2b (ENSOTSG00005026974) SPECC1 (ENSOTSG00005026978) TIMM22 (ENSOTSG00005026981) ABR (ENSOTSG00005026985) RUNDC3A (ENSOTSG00005027003) ##20 ENSOTSG00005027402 FAM117A (ENSOTSG00005027407) ##21 slc35b1 (ENSOTSG00005027416) ENSOTSG00005027423 ##22 spop (ENSOTSG00005027424) ##24 aspa (ENSOTSG00005027425) AKAP10 (ENSOTSG00005027429) ENSOTSG00005027472 ENSOTSG00005027473 cltca (ENSOTSG00005027499) ENSOTSG00005028946 rnft1 (ENSOTSG00005029055) med13a (ENSOTSG00005029059) ENSOTSG00005029413 ENSOTSG00005029416 samsn1b (ENSOTSG00005029419) GDPD5 (ENSOTSG00005029422) serpinh1a (ENSOTSG00005029441) acer3 (ENSOTSG00005029442) Coho salmon MODERN SPECIES 1 ccdc47 (ENSOKIG00005008561) DCAF7 (ENSOKIG00005008713) kcnh6a (ENSOKIG00005008746) gfap (ENSOKIG00005008782) MAP3K3 (ENSOKIG00005008809) limd2 (ENSOKIG00005009066) ddx42 (ENSOKIG00005009092) strada (ENSOKIG00005009172) rnf113a (ENSOKIG00005009328) RUNDC3A (ENSOKIG00005009517) ##20 ENSOKIG00005010175 ENSOKIG00005010180 ENSOKIG00005010190 ##21 ENSOKIG00005010196 slc35b1 (ENSOKIG00005010217) NDUFA4 (ENSOKIG00005010275) ##22 spop (ENSOKIG00005010306) ##24 NXPH3 (ENSOKIG00005010350) ##25 ENSOKIG00005010354 NGFR (ENSOKIG00005010367) ##32 ENSOKIG00005010413 MIEN1 (ENSOKIG00005010420) ENSOKIG00005010436 slc4a1a (ENSOKIG00005010463) ##33 ubtf (ENSOKIG00005031963) atxn7l3a (ENSOKIG00005032153) #35 tmub2 (ENSOKIG00005032181) asb16 (ENSOKIG00005032194) ENSOKIG00005032219 ENSOKIG00005032227 ENSOKIG00005032232 Salmo ANCESTRAL SPECIES 111 ENSGT00390000012483.h.a ENSGT00940000164923.a.b.f ##13 ENSGT00940000159038.a.b.d ##14 ENSGT00940000160236.i ENSGT00940000162290.v ENSGT00390000013997.o.a ENSGT00940000159539.o ENSGT00940000158767.g.b ENSGT00940000158377.a.c ENSGT00940000156559.n ENSGT00940000158827.bb ENSGT00390000016292.c.a ENSGT00940000158922.d.f ##20 ENSGT00950000183046.a.b.l.h ##21 ENSGT00940000157900.m.b ENSGT00940000154268.l.b ##22 ENSGT00940000154376.a.a.e ##24 ENSGT00950000182883.a.a.a.j ##25 ENSGT00730000110974.a.i ##32 ENSGT00940000162556.G.d.h ENSGT00390000010440.g.b.b ENSGT00940000177451 ENSGT00940000157423.a.a.n ##33 ENSGT00940000166349.g.b ENSGT00940000158253.ad.b #35 ENSGT00390000014069.b.h ENSGT00940000160773.e.b ENSGT00400000022305.g.a Atlantic salmon MODERN SPECIES 25 tbc1d10b (ENSSSAG00000116774) hsd3b7 (ENSSSAG00000107657) ENSSSAG00000001051 ccdc47 (ENSSSAG00000115064) WDR68 (ENSSSAG00000001025) kcnh6a (ENSSSAG00000107877) gfap (ENSSSAG00000000885) ENSSSAG00000064964 limd2 (ENSSSAG00000103558) ddx42 (ENSSSAG00000045366) strada (ENSSSAG00000040476) rnf113a (ENSSSAG00000001043) ENSSSAG00000001008 ##20 FAM117A (ENSSSAG00000000917) ##21 slc35b1 (ENSSSAG00000000899) ndufa4a (ENSSSAG00000112276) ##22 spop (ENSSSAG00000000940) ##24 NXPH3 (ENSSSAG00000043506) ##25 NGFR (ENSSSAG00000084107) ##32 ENSSSAG00000040236 slc4a1a (ENSSSAG00000064777) ##33 ubtf (ENSSSAG00000038540) atxn7l3a (ENSSSAG00000037421) #35 tmub2 (ENSSSAG00000038052) asb16 (ENSSSAG00000052261) ENSSSAG00000052248 ENSSSAG00000053729 ENSSSAG00000053720 ENSSSAG00000053633 ENSSSAG00000001403 ENSSSAG00000104943 River trout DUPLICATION River trout MODERN SPECIES 25 ENSSTUG00000010203 DCAF7 (ENSSTUG00000010255) kcnh6a (ENSSTUG00000010285) gfap (ENSSTUG00000010376) MAP3K3 (ENSSTUG00000010827) limd2 (ENSSTUG00000010876) ddx42 (ENSSTUG00000010932) strada (ENSSTUG00000010993) rnf113a (ENSSTUG00000011287) RUNDC3A (ENSSTUG00000011397) ##20 ENSSTUG00000011469 ENSSTUG00000011472 ENSSTUG00000011481 FAM117A (ENSSTUG00000011495) ##21 slc35b1 (ENSSTUG00000011509) NDUFA4 (ENSSTUG00000011529) ##22 NXPH3 (ENSSTUG00000011547) ##25 NGFR (ENSSTUG00000011551) ##32 ENSSTUG00000011574 MIEN1 (ENSSTUG00000011587) selenow2a (ENSSTUG00000011618) slc4a1a (ENSSTUG00000011652) ##33 ENSSTUG00000011836 ubtf (ENSSTUG00000011856) ENSSTUG00000012160 atxn7l3a (ENSSTUG00000012169) #35 tmub2 (ENSSTUG00000012226) asb16 (ENSSTUG00000012239) ENSSTUG00000012247 ENSSTUG00000012253 ENSSTUG00000012259 River trout MODERN SPECIES ENSSTUG00000000163 ccdc47 (ENSSTUG00000000168) DCAF7 (ENSSTUG00000000184) kcnh6a (ENSSTUG00000000205) gfap (ENSSTUG00000000241) MAP3K3 (ENSSTUG00000000257) limd2 (ENSSTUG00000000292) ddx42 (ENSSTUG00000000304) strada (ENSSTUG00000000336) rnf113a (ENSSTUG00000000386) RUNDC3A (ENSSTUG00000000407) ##20 ENSSTUG00000000426 ENSSTUG00000000428 ENSSTUG00000000434 ##21 slc35b1 (ENSSTUG00000000456) ENSSTUG00000000464 ##22 NGFR (ENSSTUG00000000477) ##32 ENSSTUG00000000489 MIEN1 (ENSSTUG00000000493) ENSSTUG00000000499 slc4a1a (ENSSTUG00000000511) ##33 ENSSTUG00000000594 ubtf (ENSSTUG00000000628) atxn7l3a (ENSSTUG00000000755) #35 tmub2 (ENSSTUG00000000771) asb16 (ENSSTUG00000000778) ENSSTUG00000000781 ENSSTUG00000000787 asic2 (ENSSTUG00000000790) trpm4a (ENSSTUG00000000814) RRN3 (ENSSTUG00000000879) Huchen MODERN SPECIES 2490 MAP3K3 (ENSHHUG00000036289) limd2 (ENSHHUG00000036273) ddx42 (ENSHHUG00000036235) strada (ENSHHUG00000036202) rnf113a (ENSHHUG00000036166) ENSHHUG00000036161 ENSHHUG00000036154 RUNDC3A (ENSHHUG00000035895) ##20 ENSHHUG00000035865 ENSHHUG00000035841 ##21 slc35b1 (ENSHHUG00000035724) NDUFA4 (ENSHHUG00000035697) ##22 Northern pike MODERN SPECIES 10 ENSELUG00000020261 ccdc47 (ENSELUG00000020298) DCAF7 (ENSELUG00000020329) kcnh6a (ENSELUG00000020445) gfap (ENSELUG00000020482) MAP3K3 (ENSELUG00000000898) limd2 (ENSELUG00000020528) ddx42 (ENSELUG00000020593) strada (ENSELUG00000020637) rnf113a (ENSELUG00000020657) ENSELUG00000020665 ENSELUG00000020675 RUNDC3A (ENSELUG00000020709) ##20 ENSELUG00000020723 ##21 slc35b1 (ENSELUG00000020756) ENSELUG00000020792 ##22 spop (ENSELUG00000021725) ##24 NXPH3 (ENSELUG00000021845) ##25 ENSELUG00000021850 NGFR (ENSELUG00000021915) ##32 ENSELUG00000021930 MIEN1 (ENSELUG00000021956) selenow2a (ENSELUG00000021964) slc4a1a (ENSELUG00000021990) ##33 ubtf (ENSELUG00000022011) atxn7l3a (ENSELUG00000022068) #35 tmub2 (ENSELUG00000022078) asb16 (ENSELUG00000022103) ENSELUG00000022131 ENSELUG00000022146 asic2 (ENSELUG00000022180) Otomorpha ANCESTRAL SPECIES ENSGT00940000154268.l ##22 Clupeiformes ANCESTRAL SPECIES 155 ENSGT00390000006939.i.a.f.b ENSGT00940000165921 ENSGT00940000159539 ENSGT00940000158767 ENSGT00940000158377.a ENSGT00940000156559 ENSGT00940000158827 ENSGT00390000016292 ENSGT00940000158922.d ##20 ENSGT00990000204783 ENSGT00940000177150 ENSGT00960000187164 ENSGT00950000183046.a.b.l.d ##21 ENSGT00940000157900 ENSGT00940000154268.k.a ##22 ENSGT00940000154268.l ##22 ENSGT00940000154376.a.a ##24 ENSGT00950000182883.a.a.a ##25 ENSGT00730000110974.a ##32 ENSGT00390000010440.g.a ENSGT00940000177451 ENSGT00940000157423.a.a ##33 ENSGT00940000166349 ENSGT00940000158253.t.b #35 ENSGT00390000014069.b ENSGT00940000160773 ENSGT00400000022305 ENSGT00940000154991.a.b ENSGT00940000154991.a.a ENSGT00940000157190.c ENSGT00710000106813.B.a Atlantic herring MODERN SPECIES ccdc47 (ENSCHAG00000010602) dcaf7 (ENSCHAG00000010570) kcnh6a (ENSCHAG00000010459) gfap (ENSCHAG00000010212) MAP3K3 (ENSCHAG00000009572) limd2 (ENSCHAG00000009547) ddx42 (ENSCHAG00000009427) strada (ENSCHAG00000009246) rnf113a (ENSCHAG00000009175) ENSCHAG00000009169 ENSCHAG00000009140 ENSCHAG00000009129 RUNDC3A (ENSCHAG00000009114) ##20 FAM117A (ENSCHAG00000009073) ##21 slc35b1 (ENSCHAG00000008733) ndufa4a (ENSCHAG00000008704) ##22 spop (ENSCHAG00000008557) ##24 NXPH3 (ENSCHAG00000008546) ##25 atp5mc3b (ENSCHAG00000008535) NGFR (ENSCHAG00000008413) ##32 ENSCHAG00000008385 suz12a (ENSCHAG00000008173) crlf3 (ENSCHAG00000008063) ENSCHAG00000007989 ADAP2 (ENSCHAG00000007891) rhot1a (ENSCHAG00000007314) zgc:153240 (ENSCHAG00000007254) znf207a (ENSCHAG00000007220) TNRC6C (ENSCHAG00000006628) septin9a (ENSCHAG00000006275) KHSRP (ENSCHAG00000006158)