Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT01090000260249	ENSGT00940000154768.B #15	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT01090000260249	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT01090000260249	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT01090000260249	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Perciformes	ANCESTRAL SPECIES	9	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000171105	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Cottioidei	ANCESTRAL SPECIES	12	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Lumpfish	MODERN SPECIES	10	PPFIA3 (ENSCLMG00005011890) #7	ENSCLMG00005011887 #8	ENSCLMG00005011885 #9	ENSCLMG00005011884 #10	ENSCLMG00005011883 #11	mybpc2b (ENSCLMG00005011580) #12	ENSCLMG00005011566 #13	LRRC4B (ENSCLMG00005011538) #14	ENSCLMG00005011534 #15	USP31 (ENSCLMG00005011531) #16	cog7 (ENSCLMG00005011481) #17	MSS51 (ENSCLMG00005011476) #18	ENSCLMG00005011475 #19	CAPN15 (ENSCLMG00005011469) #20	ENSCLMG00005011462 #21	nog2 (ENSCLMG00005011461) #22	ntn2 (ENSCLMG00005011460) #23	ENSCLMG00005011457 #24	TBC1D24 (ENSCLMG00005011375) #25	ATP6V0C (ENSCLMG00005011370) #26	nubp2 (ENSCLMG00005011341) #27	ENSCLMG00005011338 #28	ENSCLMG00005011337 #29	ENSCLMG00005011321 #30	ENSCLMG00005011315 #31	MPRIP (ENSCLMG00005011092) #32	ENSCLMG00005011088 #33	ENSCLMG00005011085 #34	PRR35 (ENSCLMG00005011084) #35	crp2 (ENSCLMG00005011083) #36	stub1 (ENSCLMG00005011082) #37
Stickleback	MODERN SPECIES	5	ENSGACG00000008100	ENSGACG00000008107 #11	mybpc2b (ENSGACG00000008110) #12	ENSGACG00000008187 #13	LRRC4B (ENSGACG00000008204) #14	ENSGACG00000008205	HS3ST2 (ENSGACG00000008211)	ENSGACG00000008213	USP31 (ENSGACG00000008214) #16	cog7 (ENSGACG00000008223) #17	ENSGACG00000008231	MSS51 (ENSGACG00000008232) #19	ENSGACG00000008245	ENSGACG00000008248 #20	ENSGACG00000008256 #21	nog2 (ENSGACG00000008267) #22	ntn2 (ENSGACG00000008270) #23	ENSGACG00000008273 #24	TBC1D24 (ENSGACG00000008278) #25	ATP6V0C (ENSGACG00000008293) #26	nubp2 (ENSGACG00000008320) #27	ENSGACG00000008335 #28	ENSGACG00000008342 #29	ENSGACG00000008345	ENSGACG00000008354 #30	ablim1b (ENSGACG00000008370) #31	MPRIP (ENSGACG00000008379) #32	ENSGACG00000008397	PRR35 (ENSGACG00000008401) #35	crp2 (ENSGACG00000008405) #36	stub1 (ENSGACG00000008414) #37
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000171105	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Channel bull blenny	MODERN SPECIES	10	ENSCGOG00000022417 #7	ENSCGOG00000022458 #8	ENSCGOG00000022460 #9	ENSCGOG00000022462 #10	ENSCGOG00000022464 #11	mybpc2b (ENSCGOG00000022522) #12	ENSCGOG00000023638 #13	LRRC4B (ENSCGOG00000023642) #14	HS3ST2 (ENSCGOG00000023645)	cog7 (ENSCGOG00000023661) #17	ENSCGOG00000023755	ENSCGOG00000023757	MSS51 (ENSCGOG00000023759) #19	ENSCGOG00000023766 #21	ENSCGOG00000023771	nog2 (ENSCGOG00000023772) #22	ntn2 (ENSCGOG00000023774) #23	ENSCGOG00000023779 #24	TBC1D24 (ENSCGOG00000023787) #25	ATP6V0C (ENSCGOG00000023789) #26	nubp2 (ENSCGOG00000023793) #27	ENSCGOG00000023798 #28	ENSCGOG00000002375 #29	ENSCGOG00000002387 #30	ablim1b (ENSCGOG00000002421) #31	MPRIP (ENSCGOG00000002508) #32	ENSCGOG00000002842 #33	PRR35 (ENSCGOG00000002848) #35	metrn (ENSCGOG00000002854)	ENSCGOG00000002857	IFT140 (ENSCGOG00000002896)
Pike perch	MODERN SPECIES	3	ENSSLUG00000007535 #8	ENSSLUG00000007546 #9	ENSSLUG00000007554 #10	ENSSLUG00000007564 #11	mybpc2b (ENSSLUG00000007632) #12	ENSSLUG00000008501 #13	LRRC4B (ENSSLUG00000008516) #14	ENSSLUG00000008519 #15	USP31 (ENSSLUG00000008523) #16	cog7 (ENSSLUG00000008549) #17	MSS51 (ENSSLUG00000008603) #18	MSS51 (ENSSLUG00000008611) #19	CAPN15 (ENSSLUG00000008620) #20	ENSSLUG00000008629	ENSSLUG00000008640 #21	nog2 (ENSSLUG00000008648) #22	ntn2 (ENSSLUG00000008652) #23	ENSSLUG00000008663 #24	TBC1D24 (ENSSLUG00000008676) #25	ATP6V0C (ENSSLUG00000008682) #26	nubp2 (ENSSLUG00000008697) #27	ENSSLUG00000008704 #28	ENSSLUG00000008708 #29	ENSSLUG00000008716 #30
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT01090000260249	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT01090000260249	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
European seabass	MODERN SPECIES	11	ENSDLAG00005009944 #7	ENSDLAG00005009857 #8	ENSDLAG00005009847 #9	ENSDLAG00005009831 #10	ENSDLAG00005009828 #11	ENSDLAG00005009509 #12	ENSDLAG00005009401 #13	LRRC4B (ENSDLAG00005027065) #14	ENSDLAG00005009392	HS3ST2 (ENSDLAG00005009389)	ENSDLAG00005009372 #16	COG7 (ENSDLAG00005009341) #17	ENSDLAG00005034965 #18	ENSDLAG00005009199 #20	ENSDLAG00005009161 #21	nog2 (ENSDLAG00005009159) #22	ntn2 (ENSDLAG00005009141) #23	ENSDLAG00005009119 #24	ENSDLAG00005009116 #25	VATL (ENSDLAG00005030834) #26	nubp2 (ENSDLAG00005009011) #27	ENSDLAG00005033812 #28	ENSDLAG00005032822 #29	ENSDLAG00005008970 #30	ENSDLAG00005008922 #31	ENSDLAG00005007478 #32	ENSDLAG00005007415	ENSDLAG00005007396 #35	ENSDLAG00005007389 #36	ENSDLAG00005007372 #37	metrn (ENSDLAG00005027335)
Large yellow croaker	MODERN SPECIES	488	PPFIA3 (ENSLCRG00005007020) #7	ENSLCRG00005007158 #8	ENSLCRG00005007160 #9	ENSLCRG00005007161 #10	ENSLCRG00005007162 #11	mybpc2b (ENSLCRG00005007183) #12	ENSLCRG00005010195 #13	LRRC4B (ENSLCRG00005010197) #14	ENSLCRG00005010199 #15	USP31 (ENSLCRG00005010204) #16	cog7 (ENSLCRG00005010213) #17	MSS51 (ENSLCRG00005010219) #18	MSS51 (ENSLCRG00005010220) #19	CAPN15 (ENSLCRG00005010225) #20	ENSLCRG00005010420 #21	nog2 (ENSLCRG00005010428) #22	ntn2 (ENSLCRG00005010430) #23	ENSLCRG00005010432 #24	TBC1D24 (ENSLCRG00005010433) #25	ATP6V0C (ENSLCRG00005010434) #26	nubp2 (ENSLCRG00005010439) #27	ENSLCRG00005010521 #28	ENSLCRG00005010524 #29	ENSLCRG00005010525 #30	ablim1b (ENSLCRG00005010527) #31	MPRIP (ENSLCRG00005010537) #32	ENSLCRG00005011143 #33	PRR35 (ENSLCRG00005011147) #35	crp2 (ENSLCRG00005011150) #36	stub1 (ENSLCRG00005007262) #37	metrn (ENSLCRG00005007265)
Gilthead seabream	MODERN SPECIES	12	PPFIA3 (ENSSAUG00010023520) #7	ENSSAUG00010023491 #8	ENSSAUG00010023489 #9	ENSSAUG00010023488 #10	ENSSAUG00010023487 #11	mybpc2b (ENSSAUG00010016277) #12	ENSSAUG00010016199 #13	LRRC4B (ENSSAUG00010016196) #14	HS3ST2 (ENSSAUG00010016195)	USP31 (ENSSAUG00010016188) #16	cog7 (ENSSAUG00010016184) #17	MSS51 (ENSSAUG00010016183) #18	MSS51 (ENSSAUG00010016181) #19	CAPN15 (ENSSAUG00010016176) #20	ENSSAUG00010016172 #21	nog2 (ENSSAUG00010016171) #22	ntn2 (ENSSAUG00010016169) #23	ENSSAUG00010016162 #24	TBC1D24 (ENSSAUG00010016158) #25	ATP6V0C (ENSSAUG00010016151) ##26	nubp2 (ENSSAUG00010016136) #27	ENSSAUG00010016130 #28	ENSSAUG00010018228 #29	ENSSAUG00010018226 #30	ablim1b (ENSSAUG00010016992) #31	MPRIP (ENSSAUG00010016963) #32	ENSSAUG00010016957	PRR35 (ENSSAUG00010016954) #35	crp2 (ENSSAUG00010016953) #36	stub1 (ENSSAUG00010016951) #37	metrn (ENSSAUG00010016950)
Ballan wrasse	MODERN SPECIES	103	ENSLBEG00000013029 #9	ENSLBEG00000013054 #10	ENSLBEG00000013069 #11	mybpc2b (ENSLBEG00000013094) #12	ENSLBEG00000013177 #13	LRRC4B (ENSLBEG00000013211) #14	ENSLBEG00000013243 #15	USP31 (ENSLBEG00000013316) #16	cog7 (ENSLBEG00000013453) #17	ENSLBEG00000013548	MSS51 (ENSLBEG00000013561) #18	MSS51 (ENSLBEG00000013576) #19	CAPN15 (ENSLBEG00000013641) #20	ENSLBEG00000013719	ENSLBEG00000013738 #21	nog2 (ENSLBEG00000013774) #22	ntn2 (ENSLBEG00000013806) #23	ENSLBEG00000013844 #24	TBC1D24 (ENSLBEG00000013880) #25	ATP6V0C (ENSLBEG00000013910) #26	nubp2 (ENSLBEG00000013929) #27	ENSLBEG00000013963 #28	ENSLBEG00000014000 #29	ENSLBEG00000014037 #30	ablim1b (ENSLBEG00000014091) #31	MPRIP (ENSLBEG00000014183) #32	ENSLBEG00000014299 #33	ENSLBEG00000014324 #35	crp2 (ENSLBEG00000014340) #36	stub1 (ENSLBEG00000014362) #37	metrn (ENSLBEG00000014389)
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000167425	ENSGT01050000244900.a.b.f.b #7	ENSGT00940000161121 #8	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b	ENSGT00940000153417.A
Fugu	MODERN SPECIES		ENSTRUG00000013290	ENSTRUG00000013329	PPFIA3 (ENSTRUG00000013342) #7	ENSTRUG00000027287 #8	ENSTRUG00000028919 #9	ENSTRUG00000024447 #10	mybpc2b (ENSTRUG00000013734) #12	ENSTRUG00000013930 #13	LRRC4B (ENSTRUG00000002618) #14	ENSTRUG00000014088 #15	cog7 (ENSTRUG00000014115) #17	MSS51 (ENSTRUG00000032136) #18	MSS51 (ENSTRUG00000014257) #19	CAPN15 (ENSTRUG00000014283) #20	ENSTRUG00000031750 #21	nog2 (ENSTRUG00000014323) #22	ntn2 (ENSTRUG00000014332) #23	TBC1D24 (ENSTRUG00000014498) #25	ENSTRUG00000025985 #28	ENSTRUG00000023248 #29	ENSTRUG00000014585 #30	ABLIM1 (ENSTRUG00000027510) #31	MPRIP (ENSTRUG00000014685) #32	ENSTRUG00000025439 #35	crp2 (ENSTRUG00000014803) #36	stub1 (ENSTRUG00000014817) #37	metrn (ENSTRUG00000025221)	tmem204 (ENSTRUG00000028725)	IFT140 (ENSTRUG00000014865)	telo2 (ENSTRUG00000014963)	rab11fip3 (ENSTRUG00000015066)
Tetraodon	MODERN SPECIES	13	tlcd3ba (ENSTNIG00000006532)	ENSTNIG00000001006	ENSTNIG00000006576	PPFIA3 (ENSTNIG00000006577) #7	mybpc2b (ENSTNIG00000012787) #12	ENSTNIG00000012788 #13	LRRC4B (ENSTNIG00000012789) #14	ENSTNIG00000012790 #15	USP31 (ENSTNIG00000012791) #16	cog7 (ENSTNIG00000012792) #17	MSS51 (ENSTNIG00000012793) #18	MSS51 (ENSTNIG00000012794) #19	ENSTNIG00000001735 #20	ENSTNIG00000012795 #20	ENSTNIG00000012796 #21	nog2 (ENSTNIG00000012797) #22	ntn2 (ENSTNIG00000012798) #23	ENSTNIG00000012799 #24	TBC1D24 (ENSTNIG00000012800) #25	ATP6V0C (ENSTNIG00000012801) #26	nubp2 (ENSTNIG00000012802) #27	ENSTNIG00000012803 #28	ENSTNIG00000012804 #29	ENSTNIG00000012805 #30	ENSTNIG00000001356 #30	ABLIM1 (ENSTNIG00000012806) #31	MPRIP (ENSTNIG00000012807) #32	PRR35 (ENSTNIG00000012808) #35	crp2 (ENSTNIG00000000855) #36	stub1 (ENSTNIG00000012809) #37	metrn (ENSTNIG00000012810)
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT01090000260249	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT01090000260249	ENSGT00940000154768.B #15	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00940000164586.g.b	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b
Zig-zag eel	MODERN SPECIES	10	ENSMAMG00000011134 #8	ENSMAMG00000026681 #9	ENSMAMG00000011121 #10	ENSMAMG00000011107 #11	ENSMAMG00000011018 #12	ENSMAMG00000010966 #13	ENSMAMG00000010950 #14	ENSMAMG00000010942	ENSMAMG00000010936 #15	ENSMAMG00000010891 #16	ENSMAMG00000010856 #17	ENSMAMG00000010812 #18	ENSMAMG00000026355 #19	ENSMAMG00000010762 #20	ENSMAMG00000010756	nog2 (ENSMAMG00000010740) #22	ntn2 (ENSMAMG00000010731) #23	ENSMAMG00000010692 #24	ENSMAMG00000010662 #25	ATP6V0C (ENSMAMG00000025214) #26	nubp2 (ENSMAMG00000010637) #27	ENSMAMG00000010617 #28	ENSMAMG00000010583 #29	ENSMAMG00000010548 #30	ENSMAMG00000010525 #31	ENSMAMG00000010355	ENSMAMG00000010337 #35	ENSMAMG00000010328 #36	ENSMAMG00000010308 #37	metrn (ENSMAMG00000010298)	tmem204 (ENSMAMG00000025271)
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00940000161121 #8	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000160498.d	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b	ENSGT00390000013678
Climbing perch	MODERN SPECIES	10	ENSATEG00000017515 #7	ENSATEG00000017494 #8	ENSATEG00000017470 #9	ENSATEG00000017459 #10	ENSATEG00000029745 #11	ENSATEG00000017258 #12	ENSATEG00000017164 #13	ENSATEG00000028786 #14	ENSATEG00000017107 #15	ENSATEG00000017057 #16	ENSATEG00000016997 #17	ENSATEG00000026789 #18	ENSATEG00000030151 #19	ENSATEG00000016822 #20	ENSATEG00000016799 #21	nog2 (ENSATEG00000016782) #22	ntn2 (ENSATEG00000016766) #23	ENSATEG00000016755 #24	ENSATEG00000016732 #25	ATP6V0C (ENSATEG00000016719) #26	nubp2 (ENSATEG00000016699) #27	ENSATEG00000016686 #28	ENSATEG00000016671 #29	ENSATEG00000016644 #30	ENSATEG00000016599 #31	ENSATEG00000016451 #32	ENSATEG00000016425 #33	ENSATEG00000016409 #35	ENSATEG00000027066 #36	ENSATEG00000016370 #37	metrn (ENSATEG00000016359)
Siamese fighting fish	MODERN SPECIES	9	fgf21 (ENSBSLG00000008833)	PPFIA3 (ENSBSLG00000007913) #7	ENSBSLG00000007380 #8	ENSBSLG00000007365 #9	ENSBSLG00000007361 #10	mybpc2b (ENSBSLG00000007218) #12	ENSBSLG00000006696 #13	LRRC4B (ENSBSLG00000005923) #14	HS3ST2 (ENSBSLG00000005918)	USP31 (ENSBSLG00000005887) #16	cog7 (ENSBSLG00000005525) #17	MSS51 (ENSBSLG00000005455) #18	ENSBSLG00000005423 #19	ENSBSLG00000005415 #20	ENSBSLG00000005142 #21	nog2 (ENSBSLG00000005108) #22	ntn2 (ENSBSLG00000005025) #23	ENSBSLG00000004980 #24	TBC1D24 (ENSBSLG00000020690) #25	ATP6V0C (ENSBSLG00000020689) #26	nubp2 (ENSBSLG00000020683) #27	ENSBSLG00000020675 #28	ENSBSLG00000020673 #30	ABLIM1 (ENSBSLG00000020669) #31	PRR35 (ENSBSLG00000020664) #35	crp2 (ENSBSLG00000020662) #36	stub1 (ENSBSLG00000020657) #37	metrn (ENSBSLG00000020656)	ENSBSLG00000020655	tmem204 (ENSBSLG00000020653)	IFT140 (ENSBSLG00000020602)
Carangaria	ANCESTRAL SPECIES	13	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT01090000260249	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00990000204060	ENSGT00390000001390.b
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT01090000260249	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b	ENSGT00390000013678
Seriola	ANCESTRAL SPECIES	1	ENSGT00940000161121 #8	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00390000001390.b	ENSGT00390000013678
Greater amberjack	MODERN SPECIES	27	PPFIA3 (ENSSDUG00000023357) #7	ENSSDUG00000000073 #8	ENSSDUG00000000135 #10	ENSSDUG00000000162 #11	mybpc2b (ENSSDUG00000000197) #12	ENSSDUG00000000332 #13	LRRC4B (ENSSDUG00000000408) #14	ENSSDUG00000000439 #15	USP31 (ENSSDUG00000000463) #16	cog7 (ENSSDUG00000000519) #17	ENSSDUG00000000587	MSS51 (ENSSDUG00000000606) #18	MSS51 (ENSSDUG00000000640) #19	CAPN15 (ENSSDUG00000000678) #20	ENSSDUG00000000750 #21	nog2 (ENSSDUG00000000764) #22	ntn2 (ENSSDUG00000000780) #23	ENSSDUG00000000851 #24	TBC1D24 (ENSSDUG00000000932) #25	ATP6V0C (ENSSDUG00000000954) #26	nubp2 (ENSSDUG00000000978) #27	ENSSDUG00000001009 #28	ENSSDUG00000001038 #29	ENSSDUG00000001052 #30	ablim1b (ENSSDUG00000001109) #31	MPRIP (ENSSDUG00000001143) #32	ENSSDUG00000001215 #33	ENSSDUG00000001243 #35	crp2 (ENSSDUG00000001278) #36	stub1 (ENSSDUG00000001294) #37	metrn (ENSSDUG00000001304)
Yellowtail amberjack	MODERN SPECIES	2878	ENSSLDG00000011463 #9	ENSSLDG00000011475 #10	ENSSLDG00000011498 #11	mybpc2b (ENSSLDG00000011549) #12	ENSSLDG00000011659 #13	LRRC4B (ENSSLDG00000011676) #14	ENSSLDG00000011691 #15	USP31 (ENSSLDG00000011705) #16	cog7 (ENSSLDG00000011729) #17	ENSSLDG00000011774	ENSSLDG00000011784	MSS51 (ENSSLDG00000011799) #19	ENSSLDG00000011819 #18	CAPN15 (ENSSLDG00000011854) #20	ENSSLDG00000011931 #21	nog2 (ENSSLDG00000011955) #22	ntn2 (ENSSLDG00000011975) #23	ENSSLDG00000012002 #24	TBC1D24 (ENSSLDG00000012032) #25	ATP6V0C (ENSSLDG00000012068) #26	nubp2 (ENSSLDG00000012088) #27	ENSSLDG00000012132 #28	ENSSLDG00000012162 #29	ENSSLDG00000012191 #30	ablim1b (ENSSLDG00000012253) #31	MPRIP (ENSSLDG00000012327) #32	ENSSLDG00000012487 #33	PRR35 (ENSSLDG00000012526) #35	crp2 (ENSSLDG00000012559) #36	stub1 (ENSSLDG00000012577) #37	metrn (ENSSLDG00000012588)
Barramundi perch	MODERN SPECIES	195	ENSLCAG00010000761 #8	ENSLCAG00010000745 #9	ENSLCAG00010000741 #11	ENSLCAG00010000739 #10	mybpc2b (ENSLCAG00010000705) #12	ENSLCAG00010000655 #13	LRRC4B (ENSLCAG00010000649) #14	ENSLCAG00010000644	ENSLCAG00010000639 #15	USP31 (ENSLCAG00010000614) #16	cog7 (ENSLCAG00010000548) #17	ENSLCAG00010000519	ENSLCAG00010000502	MSS51 (ENSLCAG00010000491) #18	MSS51 (ENSLCAG00010000486) #19	nog2 (ENSLCAG00010000410) #22	ntn2 (ENSLCAG00010000396) #23	ENSLCAG00010000383 #24	TBC1D24 (ENSLCAG00010000372) #25	ATP6V0C (ENSLCAG00010000340) #26	nubp2 (ENSLCAG00010000302) #27	ENSLCAG00010000282 #28	ENSLCAG00010000268 #29	ENSLCAG00010000239 #30	ablim1b (ENSLCAG00010026799) #31	MPRIP (ENSLCAG00010026790) #32	ENSLCAG00010026773	ENSLCAG00010026769 #35	crp2 (ENSLCAG00010026767) #36	stub1 (ENSLCAG00010026765) #37	metrn (ENSLCAG00010026764)
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00930000151196.a.b #9	ENSGT00930000151196.a.a.c #10	ENSGT00930000151196.a.a.d #11	ENSGT00940000160092.A #12	ENSGT00940000161433 #13	ENSGT00940000160261.h #14	ENSGT00940000154768.B #15	ENSGT00940000156355.n.b #16	ENSGT00390000001260 #17	ENSGT00950000182933.B.a.a	ENSGT00940000153820.b.b.b #18	ENSGT00940000153820.b.b.a #19	ENSGT00940000158312.e #20	ENSGT00940000163984.B #21	ENSGT00940000163071	ENSGT00390000006009.a.a.b #22	ENSGT00940000153882.a.b.b.a #23	ENSGT00940000153470.a.b.a #24	ENSGT00410000025739.c.a #25	ENSGT00550000074873.ob.a.b.b #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.a #28	ENSGT00530000063937.b #29	ENSGT00940000165198 #30	ENSGT00950000182850.a.a.a #31	ENSGT00940000155286.m.a #32	ENSGT00530000063870.b #35	ENSGT01100000263515.a.b.a.b.a.h #36	ENSGT00930000151045.f #37	ENSGT00990000204060	ENSGT00390000001390.b
Turbot	MODERN SPECIES	9	ENSSMAG00000035681 #9	ENSSMAG00000015118 #10	ENSSMAG00000015097 #11	ENSSMAG00000014766 #12	ENSSMAG00000014708 #13	ENSSMAG00000014678 #14	ENSSMAG00000014663 #15	ENSSMAG00000014625 #16	ENSSMAG00000014575 #17	ENSSMAG00000029485	ENSSMAG00000014549 #18	ENSSMAG00000014526 #19	ENSSMAG00000014472 #20	ENSSMAG00000014414 #21	ENSSMAG00000031672	nog2 (ENSSMAG00000014390) #22	ENSSMAG00000014384	ENSSMAG00000014370	ntn2 (ENSSMAG00000014362) #23	ENSSMAG00000014337 #24	ENSSMAG00000014320 #25	ATP6V0C (ENSSMAG00000014308) #26	nubp2 (ENSSMAG00000014291) #27	ENSSMAG00000014256 #28	ENSSMAG00000014224 #29	ENSSMAG00000014201 #30	ENSSMAG00000014171 #31	ENSSMAG00000013881 #35	ENSSMAG00000035710 #36	ENSSMAG00000013859	ENSSMAG00000013837 #37
Tongue sole	MODERN SPECIES	18	ENSCSEG00000019318 ##7	ENSCSEG00000019315 ##7	ENSCSEG00000019310 #8	ENSCSEG00000019307	ENSCSEG00000019303 #9	ENSCSEG00000019291 #11	cog7 (ENSCSEG00000019266) #17	USP31 (ENSCSEG00000019256) #16	LRRC4B (ENSCSEG00000019254) #14	ENSCSEG00000019250 #13	mybpc2b (ENSCSEG00000019242) #12	ENSCSEG00000019232	ENSCSEG00000019230 #18	MSS51 (ENSCSEG00000018930) #19	CAPN15 (ENSCSEG00000018917) #20	nog2 (ENSCSEG00000018913) #22	TBC1D24 (ENSCSEG00000018904) #25	ATP6V0C (ENSCSEG00000018902) #26	nubp2 (ENSCSEG00000018886) #27	ENSCSEG00000018877 #35	ENSCSEG00000018867	ENSCSEG00000018856	ftsj1 (ENSCSEG00000018843)	ENSCSEG00000018839	ENSCSEG00000018796	aldoaa (ENSCSEG00000018782)	ENSCSEG00000018666	zgc:112038 (ENSCSEG00000018654)	ENSCSEG00000018643	ENSCSEG00000018639	ENSCSEG00000017808