Pecora ANCESTRAL SPECIES 1 ENSGT00940000155223.b ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226 #11 ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00940000156843.f #18 ENSGT00940000156843.e #19 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832 #26 ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 ENSGT00940000154503.a.e Percora_a ANCESTRAL SPECIES 2 ENSGT00940000155223.b ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226 #11 ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00940000156843.f #18 ENSGT00940000156843.e.b #19 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 ENSGT00940000154503.a.e Bovidae ANCESTRAL SPECIES 2 ENSGT00940000155223.b ENSGT00940000157119.c.b ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226 #11 ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00940000156843.f #18 ENSGT00940000156843.e.b #19 ENSGT00940000155109.b #20 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 Caprinae ANCESTRAL SPECIES 1 ENSGT00940000155223.b ENSGT00940000157119.c.b ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226 #11 ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00940000156843.f #18 ENSGT00940000156843.e.b #19 ENSGT00940000159856 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 ENSGT00940000154503.a.e.a Goat MODERN SPECIES 10 ENSCHIG00000018394 #7 ENSCHIG00000011292 #8 TOM1L1 (ENSCHIG00000014834) #9 ENSCHIG00000013529 #10 STXBP4 (ENSCHIG00000015359) #11 HLF (ENSCHIG00000012814) #12 MMD (ENSCHIG00000014789) #13 SMIM36 (ENSCHIG00000002924) #14 ENSCHIG00000015118 #15 TMEM100 (ENSCHIG00000012730) #16 ENSCHIG00000016121 #17 ENSCHIG00000025776 #18 ENSCHIG00000009821 #19 ENSCHIG00000015982 #20 ENSCHIG00000026120 #21 NOG (ENSCHIG00000009389) #22 C17orf67 (ENSCHIG00000025417) #23 DGKE (ENSCHIG00000023992) #24 TRIM25 (ENSCHIG00000012511) #25 ENSCHIG00000015098 #26 SCPEP1 (ENSCHIG00000023932) #27 AKAP1 (ENSCHIG00000024545) #28 MSI2 (ENSCHIG00000016580) #29 ENSCHIG00000020866 #30 CCDC182 (ENSCHIG00000007679) #31 ENSCHIG00000017036 #32 MRPS23 (ENSCHIG00000019692) #33 CUEDC1 (ENSCHIG00000008664) #34 VEZF1 (ENSCHIG00000020465) #35 SRSF1 (ENSCHIG00000010787) #36 DYNLL2 (ENSCHIG00000009923) #37 Rambouillet Sheep MODERN SPECIES 2 ENSOARG00020023334 #19 ENSOARG00020023306 #20 ANKFN1 (ENSOARG00020022964) NOG (ENSOARG00020022924) #22 DGKE (ENSOARG00020022880) #24 TRIM25 (ENSOARG00020022691) #25 COIL (ENSOARG00020022586) #26 SCPEP1 (ENSOARG00020022517) #27 AKAP1 (ENSOARG00020022429) #28 ENSOARG00020022409 MSI2 (ENSOARG00020022222) #29 CCDC182 (ENSOARG00020022181) #31 MRPS23 (ENSOARG00020022143) #33 ENSOARG00020022026 #34 VEZF1 (ENSOARG00020021959) #35 SRSF1 (ENSOARG00020021866) #36 DYNLL2 (ENSOARG00020021813) #37 ENSOARG00020021804 ENSOARG00020021786 Bovinae ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226 #11 ENSGT00940000153814.a.k.b ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00990000203969.c.a ENSGT00940000156843.f #18 ENSGT00530000063516.a.a.d.a.a ENSGT00940000156843.e.b #19 ENSGT00940000155109.b #20 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 Bos ANCESTRAL SPECIES 1 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226.f #11 ENSGT00940000153814.a.k.b ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00990000203969.c.a ENSGT00940000156843.f #18 ENSGT00530000063516.a.a.d.a.a ENSGT00940000156843.e.b.a.b #19 ENSGT00940000155109.b #20 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.a.a.a ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 Bos_b ANCESTRAL SPECIES 38 ENSGT00940000160240 #9 ENSGT00390000007512 #10 ENSGT00390000002226.f #11 ENSGT00940000153814.a.k.b ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00990000203969.c.a ENSGT00940000156843.f #18 ENSGT00530000063516.a.a.d.a.a ENSGT00940000156843.e.b.a.b #19 ENSGT00940000155109.b #20 ENSGT00940000159856 ENSGT00940000163071 #21 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.a.a.a ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 ENSGT00390000000378.d.a #37 Cow MODERN SPECIES 10 TOM1L1 (ENSBTAG00000007013) #9 COX11 (ENSBTAG00000007015) #10 STXBP4 (ENSBTAG00000016078) #11 ENSBTAG00000007443 HLF (ENSBTAG00000006618) #12 MMD (ENSBTAG00000000205) #13 TMEM100 (ENSBTAG00000009292) #16 ENSBTAG00000053882 ENSBTAG00000038770 #19 ENSBTAG00000049426 #19 PCTP (ENSBTAG00000018706) #18 ENSBTAG00000053407 ENSBTAG00000039563 #19 ANKFN1 (ENSBTAG00000021292) ENSBTAG00000038823 #21 NOG (ENSBTAG00000040282) #22 C19H17orf67 (ENSBTAG00000035147) #23 DGKE (ENSBTAG00000004449) #24 TRIM25 (ENSBTAG00000009948) #25 COIL (ENSBTAG00000017275) #26 ENSBTAG00000052235 SCPEP1 (ENSBTAG00000007893) #27 AKAP1 (ENSBTAG00000025320) #28 MSI2 (ENSBTAG00000004406) #29 CCDC182 (ENSBTAG00000047272) #31 ENSBTAG00000051336 #32 MRPS23 (ENSBTAG00000012366) #33 CUEDC1 (ENSBTAG00000007147) #34 VEZF1 (ENSBTAG00000004193) #35 SRSF1 (ENSBTAG00000014766) #36 DYNLL2 (ENSBTAG00000025313) #37 Hybrid Bos Indicus MODERN SPECIES 10 ENSBIXG00005028177 ENSBIXG00005028174 HLF (ENSBIXG00005004845) #12 MMD (ENSBIXG00005028090) #13 SMIM36 (ENSBIXG00005028057) #14 TMEM100 (ENSBIXG00005028041) #16 ENSBIXG00005028000 ENSBIXG00005027981 ENSBIXG00005027948 #19 ENSBIXG00005004798 #18 ENSBIXG00005004781 ENSBIXG00005027797 ENSBIXG00005027776 #19 ENSBIXG00005027760 #20 ANKFN1 (ENSBIXG00005027714) NOG (ENSBIXG00005027624) #22 C17orf67 (ENSBIXG00005004744) #23 DGKE (ENSBIXG00005027582) #24 TRIM25 (ENSBIXG00005027525) #25 COIL (ENSBIXG00005006947) #26 SCPEP1 (ENSBIXG00005004720) #27 AKAP1 (ENSBIXG00005027386) #28 MSI2 (ENSBIXG00005027324) #29 CCDC182 (ENSBIXG00005027212) #31 ENSBIXG00005027205 #32 MRPS23 (ENSBIXG00005027199) #33 CUEDC1 (ENSBIXG00005027186) #34 VEZF1 (ENSBIXG00005027120) #35 SRSF1 (ENSBIXG00005004643) #36 DYNLL2 (ENSBIXG00005026989) #37 ENSBIXG00005026973 Bos_a ANCESTRAL SPECIES ENSGT00940000153814.a.k.b ENSGT00940000156555 #12 ENSGT00940000157428 #13 ENSGT00980000198588 #14 ENSGT00940000154322.A #16 ENSGT00940000156843.f #18 ENSGT00530000063516.a.a.d.a.a ENSGT00940000156843.e.b.a.b #19 ENSGT00940000159856 ENSGT00390000006009.a.a.a #22 ENSGT00390000006555 #23 ENSGT00940000158604 #24 ENSGT00940000160741 #25 ENSGT00390000004832.b #26 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.a.a.a ENSGT00940000156193 #27 ENSGT00390000001360 #28 ENSGT00940000155420.b #29 ENSGT00940000155420.a.b ##29 ENSGT00390000014787 #31 ENSGT00390000001376.gb.b.b #32 ENSGT00390000009030 #33 ENSGT00390000006762 #34 ENSGT00940000155932 #35 ENSGT00940000155585 #36 Domestic yak MODERN SPECIES 10 TOM1L1 (ENSBGRG00000020515) #9 ENSBGRG00000020446 #10 ENSBGRG00000020438 ENSBGRG00000020211 #11 ENSBGRG00000020189 HLF (ENSBGRG00000020094) #12 MMD (ENSBGRG00000019889) #13 SMIM36 (ENSBGRG00000019859) #14 TMEM100 (ENSBGRG00000019828) #16 ENSBGRG00000019800 #19 ENSBGRG00000019761 ENSBGRG00000019687 ##19 ENSBGRG00000019573 #19 ENSBGRG00000019388 #18 ANKFN1 (ENSBGRG00000017886) NOG (ENSBGRG00000017789) #22 C17orf67 (ENSBGRG00000017749) #23 DGKE (ENSBGRG00000017443) #24 TRIM25 (ENSBGRG00000017269) #25 COIL (ENSBGRG00000017148) #26 SCPEP1 (ENSBGRG00000016895) #27 AKAP1 (ENSBGRG00000016742) #28 MSI2 (ENSBGRG00000016052) #29 CCDC182 (ENSBGRG00000015975) #31 ENSBGRG00000015925 #32 MRPS23 (ENSBGRG00000015820) #33 CUEDC1 (ENSBGRG00000015459) #34 VEZF1 (ENSBGRG00000015332) #35 SRSF1 (ENSBGRG00000015169) #36 DYNLL2 (ENSBGRG00000015060) #37 ENSBGRG00000015039 Wild yak MODERN SPECIES 1817 NOG (ENSBMUG00000010512) #22 C17orf67 (ENSBMUG00000010494) #23 DGKE (ENSBMUG00000010480) #24 Siberian musk deer MODERN SPECIES 1135 ENSMMSG00000013587 #21 NOG (ENSMMSG00000013602) #22 C17orf67 (ENSMMSG00000013610) #23 DGKE (ENSMMSG00000013630) #24 TRIM25 (ENSMMSG00000013646) #25 ENSMMSG00000013677 #26 SCPEP1 (ENSMMSG00000013703) #27 AKAP1 (ENSMMSG00000013731) #28 MSI2 (ENSMMSG00000013768) #29 CCDC182 (ENSMMSG00000013850) #31 ENSMMSG00000013863 ##32 MRPS23 (ENSMMSG00000013872) #33 CUEDC1 (ENSMMSG00000013886) #34 VEZF1 (ENSMMSG00000013949) #35 SRSF1 (ENSMMSG00000014005) #36 ENSMMSG00000014050 #37 ENSMMSG00000014068 Yarkand deer MODERN SPECIES 28 ENSCHYG00000011534 ENSCHYG00000011571 ENSCHYG00000011579 KIF2B (ENSCHYG00000011589) TOM1L1 (ENSCHYG00000011635) #9 COX11 (ENSCHYG00000011817) #10 STXBP4 (ENSCHYG00000011894) #11 HLF (ENSCHYG00000012142) #12 MMD (ENSCHYG00000012201) #13 SMIM36 (ENSCHYG00000012252) #14 TMEM100 (ENSCHYG00000012275) #16 ENSCHYG00000012321 #18 ENSCHYG00000012464 #19 ENSCHYG00000012532 #20 ANKFN1 (ENSCHYG00000012595) NOG (ENSCHYG00000013131) #22 C17orf67 (ENSCHYG00000013153) #23 DGKE (ENSCHYG00000013223) #24 TRIM25 (ENSCHYG00000013431) #25 COIL (ENSCHYG00000013540) #26 SCPEP1 (ENSCHYG00000013667) #27 AKAP1 (ENSCHYG00000013837) #28 MSI2 (ENSCHYG00000013951) #29 CCDC182 (ENSCHYG00000014620) #31 MRPS23 (ENSCHYG00000014642) #33 CUEDC1 (ENSCHYG00000014793) #34 VEZF1 (ENSCHYG00000015138) #35 SRSF1 (ENSCHYG00000015369) #36 DYNLL2 (ENSCHYG00000015581) #37 ENSCHYG00000015623 ENSCHYG00000015653