Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000163317 #7	ENSGT00940000161569.c #8	ENSGT00940000153840.a.a #9	ENSGT00440000033919 #10	ENSGT00940000155223.b #11	ENSGT00940000163180 #12	ENSGT00940000160240 #13	ENSGT00390000007512.q #14	ENSGT00390000002226 #15	ENSGT00940000156555 #16	ENSGT00940000157428 #17	ENSGT00940000154322.A #18	ENSGT00940000156843 #19	ENSGT00940000159856 #20	ENSGT00940000163071 #21	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #23	ENSGT00940000158604 #24	ENSGT00940000160741 #25	ENSGT00390000004832 #26	ENSGT00390000018316.b.a.b.b.a.a.a #27	ENSGT00940000156193 #28	ENSGT00390000001360 #29	ENSGT00940000155420.b #30	ENSGT00390000014787 #31	ENSGT00390000009030 #32	ENSGT00390000006762 #33	ENSGT00940000155932 #34	ENSGT00940000155585 #35	ENSGT00390000000378.d.a #36	ENSGT00940000154503.b #37
Ryukyu mouse	MODERN SPECIES	2	MGP_CAROLIEiJ_G0016971 #7	Nme2 (MGP_CAROLIEiJ_G0016970) #8	Mbtd1 (MGP_CAROLIEiJ_G0016969) #9	Utp18 (MGP_CAROLIEiJ_G0016968) #10	Car10 (MGP_CAROLIEiJ_G0016967) #11	Kif2b (MGP_CAROLIEiJ_G0016966) #12	Tom1l1 (MGP_CAROLIEiJ_G0016965) #13	Cox11 (MGP_CAROLIEiJ_G0016964) #14	Stxbp4 (MGP_CAROLIEiJ_G0016963) #15	Hlf (MGP_CAROLIEiJ_G0016962) #16	Mmd (MGP_CAROLIEiJ_G0016961) #17	Tmem100 (MGP_CAROLIEiJ_G0016960) #18	Pctp (MGP_CAROLIEiJ_G0016959) #19	MGP_CAROLIEiJ_G0016958 #20	MGP_CAROLIEiJ_G0016957 #21	Nog (MGP_CAROLIEiJ_G0016956) #22	Gm525 (MGP_CAROLIEiJ_G0016955) #23	Dgke (MGP_CAROLIEiJ_G0016954) #24	Trim25 (MGP_CAROLIEiJ_G0016953) #25	Coil (MGP_CAROLIEiJ_G0016952) #26	MGP_CAROLIEiJ_G0016951 #27	Scpep1 (MGP_CAROLIEiJ_G0016950) #28	Akap1 (MGP_CAROLIEiJ_G0016949) #29	Msi2 (MGP_CAROLIEiJ_G0016948) #30	Ccdc182 (MGP_CAROLIEiJ_G0016947) #31	Mrps23 (MGP_CAROLIEiJ_G0016946) #32	MGP_CAROLIEiJ_G0016945 #33	Vezf1 (MGP_CAROLIEiJ_G0016944) #34	Srsf1 (MGP_CAROLIEiJ_G0016943) #35	Dynll2 (MGP_CAROLIEiJ_G0016942) #36	MGP_CAROLIEiJ_G0016941 #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000163317 #7	ENSGT00940000161569.c #8	ENSGT00940000153840.a.a #9	ENSGT00440000033919 #10	ENSGT00940000155223.b #11	ENSGT00940000163180 #12	ENSGT00940000160240 #13	ENSGT00390000007512.q #14	ENSGT00390000002226 #15	ENSGT00940000156555 #16	ENSGT00940000157428 #17	ENSGT00940000154322.A #18	ENSGT00940000156843 #19	ENSGT00940000159856 #20	ENSGT00940000163071 #21	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #23	ENSGT00940000158604 #24	ENSGT00940000160741 #25	ENSGT00390000004832 #26	ENSGT00390000018316.b.a.b.b.a.a.a #27	ENSGT00940000156193 #28	ENSGT00390000001360 #29	ENSGT00940000155420.b #30	ENSGT00390000014787 #31	ENSGT00390000009030 #32	ENSGT00390000006762 #33	ENSGT00940000155932 #34	ENSGT00940000155585 #35	ENSGT00390000000378.d.a #36	ENSGT00940000154503.b #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000163317 #7	ENSGT00940000161569.c #8	ENSGT00940000153840.a.a #9	ENSGT00440000033919 #10	ENSGT00940000155223.b #11	ENSGT00940000163180 #12	ENSGT00940000160240 #13	ENSGT00390000007512.q #14	ENSGT00390000002226 #15	ENSGT00940000156555 #16	ENSGT00940000157428 #17	ENSGT00940000154322.A #18	ENSGT00940000156843 #19	ENSGT00940000159856 #20	ENSGT00940000163071 #21	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #23	ENSGT00940000158604 #24	ENSGT00940000160741 #25	ENSGT00390000004832 #26	ENSGT00390000018316.b.a.b.b.a.a.a #27	ENSGT00940000156193 #28	ENSGT00390000001360 #29	ENSGT00940000155420.b #30	ENSGT00390000014787 #31	ENSGT00390000009030 #32	ENSGT00390000006762 #33	ENSGT00940000155932 #34	ENSGT00940000155585 #35	ENSGT00390000000378.d.a #36	ENSGT00940000154503.b #37
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0017817 #7	Nme2 (MGP_SPRETEiJ_G0017816) #8	MGP_SPRETEiJ_G0017815 #9	Utp18 (MGP_SPRETEiJ_G0017814) #10	Car10 (MGP_SPRETEiJ_G0017813) #11	Kif2b (MGP_SPRETEiJ_G0017812) #12	Tom1l1 (MGP_SPRETEiJ_G0017811) #13	Cox11 (MGP_SPRETEiJ_G0017810) #14	Stxbp4 (MGP_SPRETEiJ_G0017809) #15	Hlf (MGP_SPRETEiJ_G0017808) #16	Mmd (MGP_SPRETEiJ_G0017807) #17	Tmem100 (MGP_SPRETEiJ_G0017806) #18	Pctp (MGP_SPRETEiJ_G0017805) #19	MGP_SPRETEiJ_G0017804 #20	MGP_SPRETEiJ_G0017803 #21	Nog (MGP_SPRETEiJ_G0017802) #22	Gm525 (MGP_SPRETEiJ_G0017801) #23	Dgke (MGP_SPRETEiJ_G0017800) #24	Trim25 (MGP_SPRETEiJ_G0017799) #25	Elobl (MGP_SPRETEiJ_G0017798) #27	Scpep1 (MGP_SPRETEiJ_G0017797) #28	Akap1 (MGP_SPRETEiJ_G0017796) #29	Msi2 (MGP_SPRETEiJ_G0017795) #30	Ccdc182 (MGP_SPRETEiJ_G0017794) #31	Mrps23 (MGP_SPRETEiJ_G0017793) #32	Cuedc1 (MGP_SPRETEiJ_G0017792) #33	Vezf1 (MGP_SPRETEiJ_G0017791) #34	Srsf1 (MGP_SPRETEiJ_G0017790) #35	Dynll2 (MGP_SPRETEiJ_G0017789) #36	MGP_SPRETEiJ_G0017788 #37	Epx (MGP_SPRETEiJ_G0017787)
Steppe mouse	MODERN SPECIES	3403									Hlf (ENSMSIG00000030795) #16	Mmd (ENSMSIG00000030793) #17	ENSMSIG00000030792	ENSMSIG00000030787	Tmem100 (ENSMSIG00000030786) #18	Pctp (ENSMSIG00000030783) #19	Ankfn1 (ENSMSIG00000030769) #20	Nog (ENSMSIG00000030767) #22	ENSMSIG00000030765	Gm525 (ENSMSIG00000030759) #23	Dgke (ENSMSIG00000030748) #24	ENSMSIG00000030746	Trim25 (ENSMSIG00000030740) #25
Mouse	MODERN SPECIES	2	Gm20390 (ENSMUSG00000091228)	Nme2 (ENSMUSG00000020857) #8	Mbtd1 (ENSMUSG00000059474) #9	Utp18 (ENSMUSG00000054079) #10	Car10 (ENSMUSG00000056158) #11	Kif2b (ENSMUSG00000046755) #12	Tom1l1 (ENSMUSG00000020541) #13	Cox11 (ENSMUSG00000020544) #14	Stxbp4 (ENSMUSG00000020546) #15	Hlf (ENSMUSG00000003949) #16	Mmd (ENSMUSG00000003948) #17	Smim36 (ENSMUSG00000110344)	Tmem100 (ENSMUSG00000069763) #18	Pctp (ENSMUSG00000020553) #19	Ankfn1 (ENSMUSG00000047773) #20	Nog (ENSMUSG00000048616) #22	Gm525 (ENSMUSG00000072553) #23	Dgke (ENSMUSG00000000276) #24	Trim25 (ENSMUSG00000000275) #25	Coil (ENSMUSG00000033983) #26	Elobl (ENSMUSG00000057534) #27	Scpep1 (ENSMUSG00000000278) #28	Akap1 (ENSMUSG00000018428) #29	Msi2 (ENSMUSG00000069769) #30	Ccdc182 (ENSMUSG00000034031) #31	Mrps23 (ENSMUSG00000023723) #32	Cuedc1 (ENSMUSG00000018378) #33	Vezf1 (ENSMUSG00000018377) #34	Srsf1 (ENSMUSG00000018379) #35	Dynll2 (ENSMUSG00000020483) #36	Or4d1 (ENSMUSG00000060787) #37