Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES	8	TTLL6 (ENSPANG00000022885) #7	HOXB13 (ENSPANG00000048407) #8	PRAC1 (ENSPANG00000034268) #9	HOXB9 (ENSPANG00000022896) #10	HOXB8 (ENSPANG00000022895) #11	HOXB7 (ENSPANG00000041701) #12	HOXB6 (ENSPANG00000022891) #13	HOXB5 (ENSPANG00000022889) #14	HOXB4 (ENSPANG00000022888) #15	ENSPANG00000045928 #16	HOXB2 (ENSPANG00000034765) #17	HOXB1 (ENSPANG00000022886) #18	SKAP1 (ENSPANG00000022897) #19	ENSPANG00000026200 #20	SNX11 (ENSPANG00000022898) #21	CBX1 (ENSPANG00000022906) #22	NFE2L1 (ENSPANG00000022904) #23	COPZ2 (ENSPANG00000022903) #24	CDK5RAP3 (ENSPANG00000022902) #25	PNPO (ENSPANG00000022924) #26	SP2 (ENSPANG00000022922) #27	SP6 (ENSPANG00000017158) #28	SCRN2 (ENSPANG00000022920) #29	LRRC46 (ENSPANG00000022918) #30	MRPL10 (ENSPANG00000022926) #31	OSBPL7 (ENSPANG00000022928) #32	TBX21 (ENSPANG00000022107) #33	TBKBP1 (ENSPANG00000022108) #34	KPNB1 (ENSPANG00000022099) #35	NPEPPS (ENSPANG00000022080) #36	MRPL45 (ENSPANG00000022083) #37
Olive baboon	MODERN SPECIES	3	MUC15 (ENSPANG00000025794)	SLC5A12 (ENSPANG00000015045)	FIBIN (ENSPANG00000047960)	BBOX1 (ENSPANG00000007553)	ENSPANG00000004062	CCDC34 (ENSPANG00000026210)	LGR4 (ENSPANG00000017039)	LIN7C (ENSPANG00000030729)	BDNF (ENSPANG00000007184)	ENSPANG00000048654	ENSPANG00000042438	KIF18A (ENSPANG00000007185)	METTL15 (ENSPANG00000008467)	ENSPANG00000042193	KCNA4 (ENSPANG00000040485)	ENSPANG00000025704 ##22	FSHB (ENSPANG00000038639)	ARL14EP (ENSPANG00000035131)	MPPED2 (ENSPANG00000007977)	DCDC1 (ENSPANG00000019082)	ENSPANG00000037947	ENSPANG00000042363	ENSPANG00000043615	IMMP1L (ENSPANG00000030673)	ELP4 (ENSPANG00000025795)	PAX6 (ENSPANG00000005448)	ENSPANG00000047733	ENSPANG00000049611	ENSPANG00000018409	ENSPANG00000031209	ENSPANG00000038077
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Sooty mangabey	MODERN SPECIES	663	OBSL1 (ENSCATG00000042212)	INHA (ENSCATG00000040688)	STK11IP (ENSCATG00000037453)	SLC4A3 (ENSCATG00000020520)	EPHA4 (ENSCATG00000038507)	ENSCATG00000030612	PAX3 (ENSCATG00000036737)	ENSCATG00000029364	SGPP2 (ENSCATG00000009677)	FARSB (ENSCATG00000036168)	MOGAT1 (ENSCATG00000044167)	ACSL3 (ENSCATG00000014428)	KCNE4 (ENSCATG00000032630)	SCG2 (ENSCATG00000042539)	AP1S3 (ENSCATG00000034517)	ENSCATG00000033962 #22	WDFY1 (ENSCATG00000041479)	MRPL44 (ENSCATG00000035507)	SERPINE2 (ENSCATG00000038444)	FAM124B (ENSCATG00000043202)	CUL3 (ENSCATG00000039150)	CCDC195 (ENSCATG00000026924)	ENSCATG00000020736	DOCK10 (ENSCATG00000041202)	NYAP2 (ENSCATG00000030114)	ENSCATG00000018702	IRS1 (ENSCATG00000030134)	RHBDD1 (ENSCATG00000043331)	COL4A4 (ENSCATG00000024575)	COL4A3 (ENSCATG00000034996)	MFF (ENSCATG00000031653)
Drill	DUPLICATION
Drill	MODERN SPECIES	1463															ENSMLEG00000028034	ENSMLEG00000005635 #22	FSHB (ENSMLEG00000037161)	ARL14EP (ENSMLEG00000032547)	MPPED2 (ENSMLEG00000038736)	DCDC1 (ENSMLEG00000039147)	DNAJC24 (ENSMLEG00000042215)	IMMP1L (ENSMLEG00000017715)	ELP4 (ENSMLEG00000028701)	PAX6 (ENSMLEG00000030045)	RCN1 (ENSMLEG00000041748)	WT1 (ENSMLEG00000040206)	EIF3M (ENSMLEG00000000401)	CCDC73 (ENSMLEG00000039999)	PRRG4 (ENSMLEG00000039168)	QSER1 (ENSMLEG00000027791)	DEPDC7 (ENSMLEG00000042787)
Drill	MODERN SPECIES	1297	CALCOCO2 (ENSMLEG00000034129)	TTLL6 (ENSMLEG00000023683) #7	HOXB13 (ENSMLEG00000043860) #8	PRAC1 (ENSMLEG00000033309) #9	HOXB9 (ENSMLEG00000030602) #10	HOXB8 (ENSMLEG00000007179) #11	HOXB7 (ENSMLEG00000042331) #12	HOXB6 (ENSMLEG00000029580) #13	HOXB5 (ENSMLEG00000009970) #14	HOXB3 (ENSMLEG00000026268)	HOXB4 (ENSMLEG00000029897) #15	HOXB2 (ENSMLEG00000031955) #17	HOXB1 (ENSMLEG00000037557) #18	SKAP1 (ENSMLEG00000029308) #19	SNX11 (ENSMLEG00000039008) #21	CBX1 (ENSMLEG00000038745) #22	NFE2L1 (ENSMLEG00000039330) #23	COPZ2 (ENSMLEG00000039090) #24	CDK5RAP3 (ENSMLEG00000033869) #25	PRR15L (ENSMLEG00000020212)	PNPO (ENSMLEG00000040872) #26	SP2 (ENSMLEG00000032228) #27	SP6 (ENSMLEG00000027177) #28	SCRN2 (ENSMLEG00000041491) #29	LRRC46 (ENSMLEG00000031583) #30	MRPL10 (ENSMLEG00000042780) #31	OSBPL7 (ENSMLEG00000040663) #32
Drill	MODERN SPECIES	1155															AP1S3 (ENSMLEG00000036867)	ENSMLEG00000030562 #22	WDFY1 (ENSMLEG00000034928)	MRPL44 (ENSMLEG00000029688)	SERPINE2 (ENSMLEG00000031695)	FAM124B (ENSMLEG00000027453)	CUL3 (ENSMLEG00000025201)	CCDC195 (ENSMLEG00000008972)	ENSMLEG00000036150	DOCK10 (ENSMLEG00000038949)
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00980000199681 #16	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Crab-eating macaque	DUPLICATION
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000053728	ENSMFAG00000063367	BBOX1 (ENSMFAG00000044005)	CCDC34 (ENSMFAG00000031912)	LGR4 (ENSMFAG00000034294)	LIN7C (ENSMFAG00000065010)	ENSMFAG00000061810	BDNF (ENSMFAG00000003789)	KIF18A (ENSMFAG00000002311)	METTL15 (ENSMFAG00000043868)	ENSMFAG00000054669	ENSMFAG00000004430	ENSMFAG00000062924	ENSMFAG00000050246	ENSMFAG00000049275	ENSMFAG00000001947 #22	FSHB (ENSMFAG00000039808)	ARL14EP (ENSMFAG00000001165)	MPPED2 (ENSMFAG00000045441)	DCDC1 (ENSMFAG00000040936)	IMMP1L (ENSMFAG00000030415)	ENSMFAG00000060830	ENSMFAG00000059878	ELP4 (ENSMFAG00000001333)	PAX6 (ENSMFAG00000019311)	ENSMFAG00000044003	RCN1 (ENSMFAG00000029569)	ENSMFAG00000059799	WT1 (ENSMFAG00000030746)	ENSMFAG00000062574	EIF3M (ENSMFAG00000040767)
Crab-eating macaque	MODERN SPECIES	7	PRAC1 (ENSMFAG00000039547) #9	ENSMFAG00000047612	HOXB9 (ENSMFAG00000062545) #10	HOXB8 (ENSMFAG00000033418) #11	HOXB7 (ENSMFAG00000039298) #12	HOXB6 (ENSMFAG00000002294) #13	HOXB5 (ENSMFAG00000042418) #14	HOXB4 (ENSMFAG00000041000) #15	ENSMFAG00000062776 #16	HOXB2 (ENSMFAG00000034146) #17	HOXB1 (ENSMFAG00000052359) #18	SKAP1 (ENSMFAG00000038763) #19	ENSMFAG00000048147	ENSMFAG00000047205	SNX11 (ENSMFAG00000001845) #21	CBX1 (ENSMFAG00000036790) #22	NFE2L1 (ENSMFAG00000035583) #23	COPZ2 (ENSMFAG00000045896) #24	CDK5RAP3 (ENSMFAG00000046364) #25	PRR15L (ENSMFAG00000030161)	PNPO (ENSMFAG00000039285) #26	SP2 (ENSMFAG00000038712) #27	ENSMFAG00000052999	SP6 (ENSMFAG00000030247) #28	ENSMFAG00000030335 #29	LRRC46 (ENSMFAG00000031915) #30	OSBPL7 (ENSMFAG00000001330) #32	TBX21 (ENSMFAG00000042504) #33	TBKBP1 (ENSMFAG00000001252) #34	KPNB1 (ENSMFAG00000030197) #35	NPEPPS (ENSMFAG00000003608) #36
Rhesus	DUPLICATION
Rhesus	MODERN SPECIES	5	ENSMMUG00000003022	FIBIN (ENSMMUG00000013358)	ENSMMUG00000054980	ENSMMUG00000014840	ENSMMUG00000042640	BBOX1 (ENSMMUG00000000316)	CCDC34 (ENSMMUG00000023490)	LGR4 (ENSMMUG00000023491)	LIN7C (ENSMMUG00000023119)	ENSMMUG00000053553	BDNF (ENSMMUG00000008634)	KIF18A (ENSMMUG00000013613)	METTL15 (ENSMMUG00000013616)	ENSMMUG00000065335	KCNA4 (ENSMMUG00000055210)	ENSMMUG00000016472 #22	FSHB (ENSMMUG00000042298)	ARL14EP (ENSMMUG00000017590)	MPPED2 (ENSMMUG00000017592)	ENSMMUG00000006842	ENSMMUG00000049710	IMMP1L (ENSMMUG00000016806)	DNAJC24 (ENSMMUG00000016807)	PAX6 (ENSMMUG00000016810)	ENSMMUG00000043127	RCN1 (ENSMMUG00000018360)	ENSMMUG00000041430	WT1 (ENSMMUG00000009881)	ENSMMUG00000060261	EIF3M (ENSMMUG00000009026)	CCDC73 (ENSMMUG00000009028)
Rhesus	MODERN SPECIES	7	ENSMMUG00000016305	TTLL6 (ENSMMUG00000003436) #7	HOXB13 (ENSMMUG00000060879) #8	PRAC1 (ENSMMUG00000053394) #9	HOXB9 (ENSMMUG00000052505) #10	HOXB8 (ENSMMUG00000020868) #11	HOXB7 (ENSMMUG00000055324) #12	HOXB6 (ENSMMUG00000062283) #13	HOXB5 (ENSMMUG00000051420) #14	ENSMMUG00000045203 #16	HOXB4 (ENSMMUG00000052130) #15	HOXB2 (ENSMMUG00000057001) #17	HOXB1 (ENSMMUG00000022212) #18	SKAP1 (ENSMMUG00000050742) #19	SNX11 (ENSMMUG00000020658) #21	CBX1 (ENSMMUG00000019882) #22	NFE2L1 (ENSMMUG00000021935) #23	COPZ2 (ENSMMUG00000021934) #24	CDK5RAP3 (ENSMMUG00000004760) #25	PRR15L (ENSMMUG00000050551)	PNPO (ENSMMUG00000003325) #26	SP2 (ENSMMUG00000004765) #27	ENSMMUG00000053935	SP6 (ENSMMUG00000061952) #28	MRPL10 (ENSMMUG00000021486) #29	LRRC46 (ENSMMUG00000061605) #30	OSBPL7 (ENSMMUG00000019039) #32	TBX21 (ENSMMUG00000057231) #33	TBKBP1 (ENSMMUG00000019762) #34	KPNB1 (ENSMMUG00000019760) #35	NPEPPS (ENSMMUG00000005869) #36
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	494	HOXB13 (ENSMNEG00000036275) #8	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191) #9	HOXB9 (ENSMNEG00000045476) #10	HOXB8 (ENSMNEG00000034944) #11	HOXB7 (ENSMNEG00000040001) #12	HOXB6 (ENSMNEG00000042554) #13	HOXB5 (ENSMNEG00000039003) #14	HOXB4 (ENSMNEG00000032435) #15	HOXB3 (ENSMNEG00000032425)	HOXB2 (ENSMNEG00000043416) #17	HOXB1 (ENSMNEG00000036848) #18	ENSMNEG00000033446 #20	SKAP1 (ENSMNEG00000015541) #19	SNX11 (ENSMNEG00000034920) #21	CBX1 (ENSMNEG00000039720) #22	NFE2L1 (ENSMNEG00000037921) #23	COPZ2 (ENSMNEG00000038720) #24	CDK5RAP3 (ENSMNEG00000029039) #25	PRR15L (ENSMNEG00000028174)	PNPO (ENSMNEG00000037010) #26	SP2 (ENSMNEG00000029577) #27	SP6 (ENSMNEG00000023861) #28	SCRN2 (ENSMNEG00000031786) #29	LRRC46 (ENSMNEG00000037035) #30	MRPL10 (ENSMNEG00000030905) #31	OSBPL7 (ENSMNEG00000042829) #32	TBX21 (ENSMNEG00000036627) #33	TBKBP1 (ENSMNEG00000039009) #34	KPNB1 (ENSMNEG00000040927) #35	NPEPPS (ENSMNEG00000000757) #36
Pig-tailed macaque	MODERN SPECIES	485													KIF18A (ENSMNEG00000036550)	METTL15 (ENSMNEG00000037173)	ENSMNEG00000007805	ENSMNEG00000032978 #22	FSHB (ENSMNEG00000009932)	ARL14EP (ENSMNEG00000027874)	MPPED2 (ENSMNEG00000033181)	DCDC1 (ENSMNEG00000028720)	DNAJC24 (ENSMNEG00000038746)	IMMP1L (ENSMNEG00000002551)	ELP4 (ENSMNEG00000044060)	PAX6 (ENSMNEG00000035602)	RCN1 (ENSMNEG00000032501)	ENSMNEG00000036921	WT1 (ENSMNEG00000010071)	EIF3M (ENSMNEG00000002856)	CCDC73 (ENSMNEG00000037225)	PRRG4 (ENSMNEG00000035106)	QSER1 (ENSMNEG00000038918)
Vervet Monkey	MODERN SPECIES	7	CALCOCO2 (ENSCSAG00000002506)	TTLL6 (ENSCSAG00000002511) #7	HOXB13 (ENSCSAG00000002517) #8	HOXB9 (ENSCSAG00000002521) #10	HOXB8 (ENSCSAG00000002523) #11	HOXB7 (ENSCSAG00000002524) #12	HOXB6 (ENSCSAG00000002526) #13	HOXB5 (ENSCSAG00000002529) #14	HOXB4 (ENSCSAG00000002530) #15	HOXB3 (ENSCSAG00000002533)	HOXB2 (ENSCSAG00000002536) #17	HOXB1 (ENSCSAG00000002538) #18	ENSCSAG00000019043 #20	SKAP1 (ENSCSAG00000002542) #19	SNX11 (ENSCSAG00000002545) #21	CBX1 (ENSCSAG00000002547) #22	NFE2L1 (ENSCSAG00000002550) #23	COPZ2 (ENSCSAG00000002558) #24	CDK5RAP3 (ENSCSAG00000002562) #25	PRR15L (ENSCSAG00000019042)	PNPO (ENSCSAG00000002565) #26	SP2 (ENSCSAG00000002567) #27	SP6 (ENSCSAG00000019041) #28	SCRN2 (ENSCSAG00000002569) #29	LRRC46 (ENSCSAG00000002574) #30	MRPL10 (ENSCSAG00000002576) #31	OSBPL7 (ENSCSAG00000002580) #32	TBX21 (ENSCSAG00000002587) #33	TBKBP1 (ENSCSAG00000002598) #34	KPNB1 (ENSCSAG00000002605) #35	NPEPPS (ENSCSAG00000002610) #36
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713 #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246 #36
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	585	CALCOCO2 (ENSRROG00000042598)	TTLL6 (ENSRROG00000044208) #7	HOXB13 (ENSRROG00000042147) #8	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006) #9	HOXB9 (ENSRROG00000044654) #10	HOXB8 (ENSRROG00000045349) #11	HOXB7 (ENSRROG00000035066) #12	HOXB6 (ENSRROG00000028093) #13	HOXB5 (ENSRROG00000030674) #14	HOXB3 (ENSRROG00000037630)	HOXB2 (ENSRROG00000044849) #17	HOXB1 (ENSRROG00000042747) #18	SKAP1 (ENSRROG00000031517) #19	SNX11 (ENSRROG00000029464) #21	CBX1 (ENSRROG00000041227) #22	NFE2L1 (ENSRROG00000044774) #23	COPZ2 (ENSRROG00000030969) #24	CDK5RAP3 (ENSRROG00000044651) #25	PRR15L (ENSRROG00000009484)	PNPO (ENSRROG00000044027) #26	SP2 (ENSRROG00000037481) #27	SP6 (ENSRROG00000008983) #28	SCRN2 (ENSRROG00000037252) #29	LRRC46 (ENSRROG00000039559) #30	MRPL10 (ENSRROG00000033938) #31	OSBPL7 (ENSRROG00000017659) #32
Golden snub-nosed monkey	MODERN SPECIES	3050														ENSRROG00000029058	AP1S3 (ENSRROG00000031051)	ENSRROG00000028651 #22	WDFY1 (ENSRROG00000037667)	MRPL44 (ENSRROG00000032230)	SERPINE2 (ENSRROG00000040515)	FAM124B (ENSRROG00000032916)	CUL3 (ENSRROG00000020617)	CCDC195 (ENSRROG00000037146)
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	2881																ENSRBIG00000038144 #22
Black snub-nosed monkey	MODERN SPECIES	1661	TTLL6 (ENSRBIG00000035925) #7	HOXB13 (ENSRBIG00000035598) #8	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996) #9	HOXB9 (ENSRBIG00000035654) #10	HOXB8 (ENSRBIG00000043329) #11	HOXB7 (ENSRBIG00000039896) #12	HOXB6 (ENSRBIG00000029050) #13	HOXB5 (ENSRBIG00000015821) #14	HOXB4 (ENSRBIG00000036141) #15	HOXB3 (ENSRBIG00000036705)	HOXB2 (ENSRBIG00000029105) #17	HOXB1 (ENSRBIG00000041849) #18	SKAP1 (ENSRBIG00000042563) #19	SNX11 (ENSRBIG00000030129) #21	ENSRBIG00000027048 #22	NFE2L1 (ENSRBIG00000034817) #23	COPZ2 (ENSRBIG00000038810) #24	CDK5RAP3 (ENSRBIG00000039441) #25	PRR15L (ENSRBIG00000030176)	PNPO (ENSRBIG00000042160) #26	SP2 (ENSRBIG00000032526) #27	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735	OCRL (ENSRBIG00000041702)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713.h.b #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246.i #36
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713.h.a #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246.i #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246.j.b.a #36
Gorilla	MODERN SPECIES	18	CALCOCO2 (ENSGGOG00000005537)	TTLL6 (ENSGGOG00000001947) #7	HOXB13 (ENSGGOG00000001945) #8	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105) #9	ENSGGOG00000036688 #10	HOXB8 (ENSGGOG00000039810) #11	HOXB7 (ENSGGOG00000002637) #12	HOXB6 (ENSGGOG00000002634) #13	HOXB5 (ENSGGOG00000023582) #14	HOXB3 (ENSGGOG00000012838)	HOXB2 (ENSGGOG00000009910) #17	HOXB1 (ENSGGOG00000009904) #18	SKAP1 (ENSGGOG00000012624) #19	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #22	NFE2L1 (ENSGGOG00000002268) #23	COPZ2 (ENSGGOG00000002264) #24	ENSGGOG00000022994 #25	PRR15L (ENSGGOG00000037816)	PNPO (ENSGGOG00000003786) #26	SP2 (ENSGGOG00000005330) #27	SP6 (ENSGGOG00000036261) #28	SCRN2 (ENSGGOG00000004547) #29	LRRC46 (ENSGGOG00000012667) #30	MRPL10 (ENSGGOG00000015353) #31	OSBPL7 (ENSGGOG00000015344) #32	TBX21 (ENSGGOG00000002208) #33	TBKBP1 (ENSGGOG00000002206) #34	KPNB1 (ENSGGOG00000008089) #35	ENSGGOG00000022991 #36
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246.j.b.a #36
Human	MODERN SPECIES	8	TTLL6 (ENSG00000170703) #7	HOXB13 (ENSG00000159184) #8	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182) #9	HOXB9 (ENSG00000170689) #10	HOXB8 (ENSG00000120068) #11	HOXB7 (ENSG00000260027) #12	HOXB6 (ENSG00000108511) #13	HOXB5 (ENSG00000120075) #14	HOXB4 (ENSG00000182742) #15	HOXB3 (ENSG00000120093)	HOXB2 (ENSG00000173917) #17	HOXB1 (ENSG00000120094) #18	SKAP1 (ENSG00000141293) #19	SNX11 (ENSG00000002919) #21	CBX1 (ENSG00000108468) #22	NFE2L1 (ENSG00000082641) #23	COPZ2 (ENSG00000005243) #24	CDK5RAP3 (ENSG00000108465) #25	PRR15L (ENSG00000167183)	PNPO (ENSG00000108439) #26	SP2 (ENSG00000167182) #27	SP6 (ENSG00000189120) #28	SCRN2 (ENSG00000141295) #29	LRRC46 (ENSG00000141294) #30	MRPL10 (ENSG00000159111) #31	OSBPL7 (ENSG00000006025) #32	TBX21 (ENSG00000073861) #33	TBKBP1 (ENSG00000198933) #34	KPNB1 (ENSG00000108424) #35	NPEPPS (ENSG00000141279) #36
Pan	ANCESTRAL SPECIES	3	ENSGT00940000161434 #7	ENSGT00940000159029 #8	ENSGT00860000135909	ENSGT00940000165611 #9	ENSGT00940000161386 #10	ENSGT00940000161529 #11	ENSGT00940000161230 #12	ENSGT00940000161108 #13	ENSGT00940000158354 #14	ENSGT00940000162072 #15	ENSGT00940000159774	ENSGT00940000155029.c.b #17	ENSGT00940000159503 #18	ENSGT00390000017856.b #19	ENSGT00940000160113 #21	ENSGT00940000154152.d.b #22	ENSGT00950000182892.a.b.a.a #23	ENSGT00390000004405.b #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00940000154534.a	ENSGT00390000011219 #26	ENSGT00940000159590 #27	ENSGT00940000161498 #28	ENSGT00390000013474.b.a #29	ENSGT00940000161315 #30	ENSGT00390000000603.b #31	ENSGT00940000157439 #32	ENSGT00940000160397 #33	ENSGT00940000153704.B #34	ENSGT00550000074898 #35	ENSGT00940000155246.j.b.a #36
Bonobo	MODERN SPECIES	8	CALCOCO2 (ENSPPAG00000037813)	TTLL6 (ENSPPAG00000036197) #7	HOXB13 (ENSPPAG00000027794) #8	PRAC1 (ENSPPAG00000014004) #9	HOXB9 (ENSPPAG00000028486) #10	HOXB8 (ENSPPAG00000034804) #11	HOXB7 (ENSPPAG00000010963) #12	HOXB6 (ENSPPAG00000032229) #13	HOXB5 (ENSPPAG00000039181) #14	HOXB4 (ENSPPAG00000040659) #15	HOXB3 (ENSPPAG00000032630)	HOXB2 (ENSPPAG00000027417) #17	HOXB1 (ENSPPAG00000039129) #18	SKAP1 (ENSPPAG00000039277) #19	SNX11 (ENSPPAG00000033185) #21	ENSPPAG00000030413 #22	NFE2L1 (ENSPPAG00000031737) #23	COPZ2 (ENSPPAG00000043351) #24	ENSPPAG00000029145 #25	PRR15L (ENSPPAG00000003316)	PNPO (ENSPPAG00000038148) #26	SP2 (ENSPPAG00000027065) #27	SP6 (ENSPPAG00000026169) #28	SCRN2 (ENSPPAG00000028214) #29	LRRC46 (ENSPPAG00000038983) #30	MRPL10 (ENSPPAG00000034452) #31	OSBPL7 (ENSPPAG00000027887) #32	TBX21 (ENSPPAG00000033988) #33	ENSPPAG00000040088 #34	KPNB1 (ENSPPAG00000028842) #35	ENSPPAG00000041383 #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	3	C12H12orf56 (ENSPTRG00000005172)	ENSPTRG00000050395	KICS2 (ENSPTRG00000005171)	SRGAP1 (ENSPTRG00000005170)	ENSPTRG00000047501	RXYLT1 (ENSPTRG00000005169)	DPY19L2 (ENSPTRG00000005168)	ENSPTRG00000051663	AVPR1A (ENSPTRG00000005167)	ENSPTRG00000049319	PPM1H (ENSPTRG00000005165)	MON2 (ENSPTRG00000005164)	USP15 (ENSPTRG00000005163)	ENSPTRG00000048315	TAFA2 (ENSPTRG00000005162)	ENSPTRG00000038999 #22	SLC16A7 (ENSPTRG00000005160)	ENSPTRG00000044366	LRIG3 (ENSPTRG00000005159)	ATP23 (ENSPTRG00000005156)	CTDSP2 (ENSPTRG00000005155)	AVIL (ENSPTRG00000005153)	TSFM (ENSPTRG00000005152)	EEF1AKMT3 (ENSPTRG00000005151)	METTL1 (ENSPTRG00000005150)	CYP27B1 (ENSPTRG00000005149)	MARCHF9 (ENSPTRG00000005148)	CDK4 (ENSPTRG00000005147)	TSPAN31 (ENSPTRG00000005146)	AGAP2 (ENSPTRG00000005145)	OS9 (ENSPTRG00000005144)
Chimpanzee	MODERN SPECIES	8	TTLL6 (ENSPTRG00000009361) #7	HOXB13 (ENSPTRG00000009360) #8	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359) #9	HOXB9 (ENSPTRG00000009358) #10	HOXB8 (ENSPTRG00000048497) #11	HOXB7 (ENSPTRG00000009357) #12	HOXB6 (ENSPTRG00000009356) #13	HOXB5 (ENSPTRG00000009355) #14	HOXB4 (ENSPTRG00000009354) #15	HOXB3 (ENSPTRG00000052423)	HOXB2 (ENSPTRG00000009352) #17	HOXB1 (ENSPTRG00000009351) #18	SKAP1 (ENSPTRG00000009350) #19	SNX11 (ENSPTRG00000009349) #21	CBX1 (ENSPTRG00000052115) #22	NFE2L1 (ENSPTRG00000022631) #23	COPZ2 (ENSPTRG00000009346) #24	CDK5RAP3 (ENSPTRG00000009345) #25	PRR15L (ENSPTRG00000047216)	PNPO (ENSPTRG00000009343) #26	SP2 (ENSPTRG00000009342) #27	SP6 (ENSPTRG00000009340) #28	SCRN2 (ENSPTRG00000009339) #29	LRRC46 (ENSPTRG00000009338) #30	MRPL10 (ENSPTRG00000009337) #31	OSBPL7 (ENSPTRG00000009336) #32	TBX21 (ENSPTRG00000009335) #33	TBKBP1 (ENSPTRG00000009334) #34	KPNB1 (ENSPTRG00000009333) #35	NPEPPS (ENSPTRG00000009330) #36
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	4	ENSNLEG00000029795	SEMA4F (ENSNLEG00000001057)	HK2 (ENSNLEG00000001062)	POLE4 (ENSNLEG00000027475)	TACR1 (ENSNLEG00000031195)	EVA1A (ENSNLEG00000001133)	MRPL19 (ENSNLEG00000001142)	ENSNLEG00000028366	GCFC2 (ENSNLEG00000001166)	ENSNLEG00000032694	LRRTM4 (ENSNLEG00000001198)	ENSNLEG00000035977	ENSNLEG00000032509	REG3G (ENSNLEG00000001205)	REG3A (ENSNLEG00000001228)	ENSNLEG00000031764 #22	CTNNA2 (ENSNLEG00000001259)	ENSNLEG00000028214	ENSNLEG00000031099	ENSNLEG00000029568	DNAH6 (ENSNLEG00000001321)	ENSNLEG00000034028	TRABD2A (ENSNLEG00000001389)	KCMF1 (ENSNLEG00000001418)	TCF7L1 (ENSNLEG00000001462)	ENSNLEG00000028501	ENSNLEG00000032991	ENSNLEG00000035166	TGOLN2 (ENSNLEG00000001482)	ENSNLEG00000001496	RETSAT (ENSNLEG00000001497)
Gibbon	MODERN SPECIES	105	SNF8 (ENSNLEG00000002743)	ENSNLEG00000002739	ATP5MC1 (ENSNLEG00000002718)	CALCOCO2 (ENSNLEG00000002619)	TTLL6 (ENSNLEG00000002601) #7	HOXB13 (ENSNLEG00000002594) #8	ENSNLEG00000036120	ENSNLEG00000029075	HOXB6 (ENSNLEG00000002585) #13	HOXB5 (ENSNLEG00000002574) #14	HOXB4 (ENSNLEG00000002570) #15	HOXB2 (ENSNLEG00000002566) #17	ENSNLEG00000018815 #18	SKAP1 (ENSNLEG00000002519) #19	SNX11 (ENSNLEG00000002479) #21	ENSNLEG00000002435 #22	NFE2L1 (ENSNLEG00000002415) #23	ENSNLEG00000002409 #24	ENSNLEG00000002109 #25	PRR15L (ENSNLEG00000002102)	PNPO (ENSNLEG00000002062) #26	ENSNLEG00000002058 #27	SP6 (ENSNLEG00000002050) #28	SCRN2 (ENSNLEG00000001940) #29	LRRC46 (ENSNLEG00000001902) #30	MRPL10 (ENSNLEG00000001803) #31	OSBPL7 (ENSNLEG00000001657) #32	ENSNLEG00000001655 #33	ENSNLEG00000032565 #34	KPNB1 (ENSNLEG00000001446) #35