Mus_A	ANCESTRAL SPECIES	17	ENSGT00390000001277 #8	ENSGT00390000018097.i #9	ENSGT00390000002032 #10	ENSGT00950000182998.A #11	ENSGT00940000156452 #12	ENSGT00950000183181.B.a #13	ENSGT00390000012397 #14	ENSGT00940000160102 #15	ENSGT00390000011698.c.b #16	ENSGT00940000156159 #17	ENSGT01050000248157	ENSGT00550000074912 #18	ENSGT00910000144250 #19	ENSGT00940000155517 #20	ENSGT00940000155959 #21	ENSGT00940000154071.A #22	ENSGT00950000183148.a #23	ENSGT00940000161597 #24	ENSGT00660000095541.a.b #25	ENSGT00940000156106 #26	ENSGT00940000153556.A.g.b #27	ENSGT00940000158704 #28	ENSGT00940000158072 #29	ENSGT00940000159132.a #30	ENSGT00940000156502 #31	ENSGT00490000043421 #32	ENSGT00940000158324 #33	ENSGT00940000157135 #34	ENSGT00940000156593 #35	ENSGT00970000194876	ENSGT00390000018516 #37
Ryukyu mouse	MODERN SPECIES	3	Rtn1 (MGP_CAROLIEiJ_G0017834) #7	MGP_CAROLIEiJ_G0017833 #8	Jkamp (MGP_CAROLIEiJ_G0017832) #9	L3hypdh (MGP_CAROLIEiJ_G0017831) #10	Gpr135 (MGP_CAROLIEiJ_G0017830) #11	Daam1 (MGP_CAROLIEiJ_G0017829) #12	Dact1 (MGP_CAROLIEiJ_G0017828) #13	2700049A03Rik (MGP_CAROLIEiJ_G0017827) #14	MGP_CAROLIEiJ_G0017826 #15	Tomm20l (MGP_CAROLIEiJ_G0017825) #16	Arid4a (MGP_CAROLIEiJ_G0017824) #17	Psma3 (MGP_CAROLIEiJ_G0017823) #18	Actr10 (MGP_CAROLIEiJ_G0017822) #19	Frmd6 (MGP_CAROLIEiJ_G0017821) #20	Tmx1 (MGP_CAROLIEiJ_G0017820) #21	Trim9 (MGP_CAROLIEiJ_G0017819) #22	Pygl (MGP_CAROLIEiJ_G0017818) #23	Abhd12b (MGP_CAROLIEiJ_G0017817) #24	Nin (MGP_CAROLIEiJ_G0017816) #25	Sav1 (MGP_CAROLIEiJ_G0017815) #26	MGP_CAROLIEiJ_G0017814 #27	Atl1 (MGP_CAROLIEiJ_G0017813) #28	Map4k5 (MGP_CAROLIEiJ_G0017812) #29	Cdkl1 (MGP_CAROLIEiJ_G0017811) #30	Dmac2l (MGP_CAROLIEiJ_G0017810) #31	L2hgdh (MGP_CAROLIEiJ_G0017809) #32	Sos2 (MGP_CAROLIEiJ_G0017808) #33	Vcpkmt (MGP_CAROLIEiJ_G0017807) #34	Arf6 (MGP_CAROLIEiJ_G0017806) #35	MGP_CAROLIEiJ_G0017805 #36	Nemf (MGP_CAROLIEiJ_G0017804) #37
Mus_B	ANCESTRAL SPECIES	17	ENSGT00390000001277 #8	ENSGT00390000018097.i #9	ENSGT00390000002032 #10	ENSGT00950000182998.A #11	ENSGT00940000156452 #12	ENSGT00950000183181.B.a #13	ENSGT00390000012397 #14	ENSGT00940000160102 #15	ENSGT00390000011698.c.b #16	ENSGT00940000156159 #17	ENSGT01050000248157	ENSGT00550000074912 #18	ENSGT00910000144250 #19	ENSGT00940000155517 #20	ENSGT00940000155959 #21	ENSGT00940000154071.A #22	ENSGT00950000183148.a #23	ENSGT00940000161597 #24	ENSGT00660000095541.a.b #25	ENSGT00940000156106 #26	ENSGT00940000153556.A.g.b #27	ENSGT00940000158704 #28	ENSGT00940000158072 #29	ENSGT00940000159132.a #30	ENSGT00940000156502 #31	ENSGT00490000043421.g #32	ENSGT00940000158324 #33	ENSGT00940000157135 #34	ENSGT00940000156593 #35	ENSGT00970000194876	ENSGT00390000018516 #37
Mouse	MODERN SPECIES	3	Rtn1 (ENSMUSG00000021087) #7	Ccdc175 (ENSMUSG00000021086) #8	Jkamp (ENSMUSG00000005078) #9	L3hypdh (ENSMUSG00000019718) #10	Gpr135 (ENSMUSG00000043398) #11	Daam1 (ENSMUSG00000034574) #12	Dact1 (ENSMUSG00000044548) #13	2700049A03Rik (ENSMUSG00000034601) #14	Timm9 (ENSMUSG00000021079) #15	Tomm20l (ENSMUSG00000021078) #16	Arid4a (ENSMUSG00000048118) #17	Psma3 (ENSMUSG00000060073) #18	Actr10 (ENSMUSG00000021076) #19	Frmd6 (ENSMUSG00000048285) #20	Tmx1 (ENSMUSG00000021072) #21	Trim9 (ENSMUSG00000021071) #22	Pygl (ENSMUSG00000021069) #23	Abhd12b (ENSMUSG00000090121) #24	Nin (ENSMUSG00000021068) #25	Sav1 (ENSMUSG00000021067) #26	Atl1 (ENSMUSG00000021066) #28	Map4k5 (ENSMUSG00000034761) #29	Cdkl1 (ENSMUSG00000020990) #30	Dmac2l (ENSMUSG00000054894) #31	L2hgdh (ENSMUSG00000020988) #32	Sos2 (ENSMUSG00000034801) #33	Vcpkmt (ENSMUSG00000049882) #34	Arf6 (ENSMUSG00000044147) #35	Nemf (ENSMUSG00000020982) #37	Klhdc2 (ENSMUSG00000020978)	Klhdc1 (ENSMUSG00000051890)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000001277 #8	ENSGT00390000018097.i #9	ENSGT00390000002032 #10	ENSGT00950000182998.A #11	ENSGT00940000156452 #12	ENSGT00950000183181.B.a #13	ENSGT00390000012397 #14	ENSGT00940000160102 #15	ENSGT00390000011698.c.b #16	ENSGT00940000156159 #17	ENSGT01050000248157	ENSGT00550000074912 #18	ENSGT00910000144250 #19	ENSGT00940000155517 #20	ENSGT00940000155959 #21	ENSGT00940000154071.A #22	ENSGT00950000183148.a #23	ENSGT00940000161597 #24	ENSGT00660000095541.a.b #25	ENSGT00940000156106 #26	ENSGT00940000153556.A.g.b #27	ENSGT00940000158704 #28	ENSGT00940000158072 #29	ENSGT00940000159132.a #30	ENSGT00940000156502 #31	ENSGT00490000043421.g #32	ENSGT00940000158324 #33	ENSGT00940000157135 #34	ENSGT00940000156593 #35	ENSGT00970000194876	ENSGT00390000018516 #37
Steppe mouse	MODERN SPECIES	3136														ENSMSIG00000029303 #20	Tmx1 (ENSMSIG00000029286) #21	Trim9 (ENSMSIG00000029099) #22	Pygl (ENSMSIG00000029075) #23	Abhd12b (ENSMSIG00000029052) #24	Nin (ENSMSIG00000028959) #25	ENSMSIG00000028951	Sav1 (ENSMSIG00000028944) #26	Atl1 (ENSMSIG00000028917) #28	Map4k5 (ENSMSIG00000028803) #29	ENSMSIG00000028800	Cdkl1 (ENSMSIG00000028792) #30	Dmac2l (ENSMSIG00000028784) #31	L2hgdh (ENSMSIG00000028773) #32	Sos2 (ENSMSIG00000028726) #33	Vcpkmt (ENSMSIG00000028718) #34	ENSMSIG00000028714	Arf6 (ENSMSIG00000028712) #35
spretus	MODERN SPECIES	3	Rtn1 (MGP_SPRETEiJ_G0018679) #7	Ccdc175 (MGP_SPRETEiJ_G0018678) #8	Jkamp (MGP_SPRETEiJ_G0018677) #9	L3hypdh (MGP_SPRETEiJ_G0018676) #10	Gpr135 (MGP_SPRETEiJ_G0018675) #11	Daam1 (MGP_SPRETEiJ_G0018674) #12	Dact1 (MGP_SPRETEiJ_G0018673) #13	2700049A03Rik (MGP_SPRETEiJ_G0018672) #14	Timm9 (MGP_SPRETEiJ_G0018671) #15	Tomm20l (MGP_SPRETEiJ_G0018670) #16	Arid4a (MGP_SPRETEiJ_G0018669) #17	Psma3 (MGP_SPRETEiJ_G0018668) #18	Actr10 (MGP_SPRETEiJ_G0018667) #19	Frmd6 (MGP_SPRETEiJ_G0018666) #20	Tmx1 (MGP_SPRETEiJ_G0018665) #21	Trim9 (MGP_SPRETEiJ_G0018664) #22	Pygl (MGP_SPRETEiJ_G0018663) #23	Abhd12b (MGP_SPRETEiJ_G0018662) #24	Nin (MGP_SPRETEiJ_G0018661) #25	Sav1 (MGP_SPRETEiJ_G0018660) #26	MGP_SPRETEiJ_G0018659 #27	Atl1 (MGP_SPRETEiJ_G0018658) #28	Map4k5 (MGP_SPRETEiJ_G0018657) #29	Cdkl1 (MGP_SPRETEiJ_G0018656) #30	Dmac2l (MGP_SPRETEiJ_G0018655) #31	L2hgdh (MGP_SPRETEiJ_G0018654) #32	Sos2 (MGP_SPRETEiJ_G0018653) #33	Vcpkmt (MGP_SPRETEiJ_G0018652) #34	Arf6 (MGP_SPRETEiJ_G0018651) #35	MGP_SPRETEiJ_G0018650	Nemf (MGP_SPRETEiJ_G0018649) #37