Glires ANCESTRAL SPECIES 9 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT00940000164013 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Rodentia ANCESTRAL SPECIES 9 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Kangaroo rat MODERN SPECIES 359 Trpm3 (ENSDORG00000009972) #7 Klf9 (ENSDORG00000029268) #8 Smc5 (ENSDORG00000009689) #9 Mamdc2 (ENSDORG00000000884) #10 Ptar1 (ENSDORG00000005855) #11 Apba1 (ENSDORG00000003149) #12 Entrep1 (ENSDORG00000001566) #13 Tjp2 (ENSDORG00000009039) #14 Fxn (ENSDORG00000027975) #15 Pip5k1b (ENSDORG00000001153) #16 Fam122a (ENSDORG00000001152) #17 Tmem252 (ENSDORG00000005477) #18 Pgm5 (ENSDORG00000005476) #19 Cbwd1 (ENSDORG00000004917) #20 Dock8 (ENSDORG00000007203) #21 Kank1 (ENSDORG00000015159) #22 ENSDORG00000006363 #23 Dmrt2 (ENSDORG00000007216) #24 Smarca2 (ENSDORG00000014832) #25 Vldlr (ENSDORG00000012954) #26 Kcnv2 (ENSDORG00000011511) #27 ENSDORG00000003628 #28 Rfx3 (ENSDORG00000013906) #29 ENSDORG00000025494 #30 Slc1a1 (ENSDORG00000010091) #31 Plpp6 (ENSDORG00000003071) #32 Cdc37l1 (ENSDORG00000023648) #33 Ak3 (ENSDORG00000010355) #34 Rcl1 (ENSDORG00000015645) #35 Jak2 (ENSDORG00000011552) #36 ENSDORG00000000109 #37 Myomorpha ANCESTRAL SPECIES 1 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Lesser Egyptian jerboa MODERN SPECIES 50 Mamdc2 (ENSJJAG00000010569) #10 Cfap95 (ENSJJAG00000021419) Ptar1 (ENSJJAG00000017996) #11 Apba1 (ENSJJAG00000021335) #12 Entrep1 (ENSJJAG00000021132) #13 Tjp2 (ENSJJAG00000003581) #14 Fxn (ENSJJAG00000022666) #15 Pip5k1b (ENSJJAG00000018154) #16 Fam122a (ENSJJAG00000009421) #17 Tmem252 (ENSJJAG00000015659) #18 Pgm5 (ENSJJAG00000022690) #19 ENSJJAG00000013817 #20 ENSJJAG00000009646 #21 ENSJJAG00000017231 #21 ENSJJAG00000015498 #21 Kank1 (ENSJJAG00000018774) #22 Dmrt1 (ENSJJAG00000016690) #23 Dmrt3 (ENSJJAG00000022573) Dmrt2 (ENSJJAG00000023959) #24 ENSJJAG00000010719 Smarca2 (ENSJJAG00000010867) #25 Vldlr (ENSJJAG00000016440) #26 ENSJJAG00000000409 Kcnv2 (ENSJJAG00000016782) #27 Pum3 (ENSJJAG00000012563) #28 ENSJJAG00000010263 Rfx3 (ENSJJAG00000010280) #29 ENSJJAG00000024335 Glis3 (ENSJJAG00000011399) #30 Slc1a1 (ENSJJAG00000018507) #31 ENSJJAG00000020462 Muroidea ANCESTRAL SPECIES 1 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Muroidea_A ANCESTRAL SPECIES ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Cricetidae ANCESTRAL SPECIES 1 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Cricetinae ANCESTRAL SPECIES 2 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Chinese hamster chok1gshd MODERN SPECIES 401 Mamdc2 (ENSCGRG00001023333) #10 Cfap95 (ENSCGRG00001000720) Ptar1 (ENSCGRG00001004346) #11 Apba1 (ENSCGRG00001017033) #12 Entrep1 (ENSCGRG00001002309) #13 Tjp2 (ENSCGRG00001022408) #14 Fxn (ENSCGRG00001003906) #15 ENSCGRG00001013409 Pip5k1b (ENSCGRG00001017408) #16 Fam122a (ENSCGRG00001012685) #17 Tmem252 (ENSCGRG00001019081) #18 Pgm5 (ENSCGRG00001020037) #19 Foxd4 (ENSCGRG00001006276) Cbwd1 (ENSCGRG00001020851) #20 Dock8 (ENSCGRG00001013079) #21 Kank1 (ENSCGRG00001020355) #22 Dmrt1 (ENSCGRG00001000625) #23 Dmrt3 (ENSCGRG00001005036) Dmrt2 (ENSCGRG00001007562) #24 Smarca2 (ENSCGRG00001002323) #25 Vldlr (ENSCGRG00001014399) #26 ENSCGRG00001017895 Kcnv2 (ENSCGRG00001018140) #27 Pum3 (ENSCGRG00001016402) #28 Rfx3 (ENSCGRG00001021745) #29 Glis3 (ENSCGRG00001014233) #30 Slc1a1 (ENSCGRG00001022336) #31 ENSCGRG00001023585 Spata6l (ENSCGRG00001002881) Plpp6 (ENSCGRG00001012981) #32 Cdc37l1 (ENSCGRG00001000264) #33 Golden Hamster MODERN SPECIES 617 Smc5 (ENSMAUG00000010150) #9 Mamdc2 (ENSMAUG00000011315) #10 Cfap95 (ENSMAUG00000009592) Ptar1 (ENSMAUG00000008946) #11 Apba1 (ENSMAUG00000009290) #12 Entrep1 (ENSMAUG00000010196) #13 Tjp2 (ENSMAUG00000008987) #14 Fxn (ENSMAUG00000009158) #15 Pip5k1b (ENSMAUG00000010912) #16 Fam122a (ENSMAUG00000002386) #17 Tmem252 (ENSMAUG00000008962) #18 Pgm5 (ENSMAUG00000009185) #19 Cbwd1 (ENSMAUG00000009107) #20 ENSMAUG00000009538 #21 ENSMAUG00000009191 #21 Kank1 (ENSMAUG00000009263) #22 ENSMAUG00000008975 #23 Dmrt3 (ENSMAUG00000008904) Dmrt2 (ENSMAUG00000010038) #24 ENSMAUG00000010070 #25 ENSMAUG00000008807 #25 ENSMAUG00000008613 #25 ENSMAUG00000008768 Kcnv2 (ENSMAUG00000008727) #27 Pum3 (ENSMAUG00000009733) #28 Rfx3 (ENSMAUG00000009987) #29 Slc1a1 (ENSMAUG00000009046) #31 Plpp6 (ENSMAUG00000001915) #32 Spata6l (ENSMAUG00000010530) Cdc37l1 (ENSMAUG00000008847) #33 Ak3 (ENSMAUG00000008253) #34 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000160905 #8 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Prairie vole MODERN SPECIES 16 Smc5 (ENSMOCG00000013931) #9 Mamdc2 (ENSMOCG00000010608) #10 Cfap95 (ENSMOCG00000018700) Ptar1 (ENSMOCG00000021324) #11 Apba1 (ENSMOCG00000009892) #12 Entrep1 (ENSMOCG00000018310) #13 Tjp2 (ENSMOCG00000012468) #14 Fxn (ENSMOCG00000014625) #15 Pip5k1b (ENSMOCG00000017594) #16 ENSMOCG00000010285 Fam122a (ENSMOCG00000001051) #17 Tmem252 (ENSMOCG00000017938) #18 Pgm5 (ENSMOCG00000011710) #19 Cbwd1 (ENSMOCG00000015974) #20 Dock8 (ENSMOCG00000014249) #21 Kank1 (ENSMOCG00000020725) #22 ENSMOCG00000017971 #23 Dmrt3 (ENSMOCG00000015270) Dmrt2 (ENSMOCG00000016701) #24 Smarca2 (ENSMOCG00000001611) #25 Vldlr (ENSMOCG00000004269) #26 Kcnv2 (ENSMOCG00000014872) #27 ENSMOCG00000019519 #28 Rfx3 (ENSMOCG00000018931) #29 Glis3 (ENSMOCG00000009953) #30 Slc1a1 (ENSMOCG00000017507) #31 ENSMOCG00000018225 Spata6l (ENSMOCG00000022082) Plpp6 (ENSMOCG00000001135) #32 Cdc37l1 (ENSMOCG00000018341) #33 Ak3 (ENSMOCG00000010856) #34 Northern American deer mouse MODERN SPECIES Smc5 (ENSPEMG00000010351) #9 ENSPEMG00000011160 ENSPEMG00000021172 #10 Cfap95 (ENSPEMG00000021140) Ptar1 (ENSPEMG00000018036) #11 Apba1 (ENSPEMG00000010980) #12 Entrep1 (ENSPEMG00000020060) #13 Tjp2 (ENSPEMG00000020250) #14 ENSPEMG00000019884 #15 Pip5k1b (ENSPEMG00000020095) #16 Fam122a (ENSPEMG00000012823) #17 Tmem252 (ENSPEMG00000007137) #18 Pgm5 (ENSPEMG00000020205) #19 Cbwd1 (ENSPEMG00000000396) #20 Dock8 (ENSPEMG00000014001) #21 Kank1 (ENSPEMG00000013916) #22 Dmrt1 (ENSPEMG00000019943) #23 Dmrt3 (ENSPEMG00000019990) Dmrt2 (ENSPEMG00000019767) #24 Smarca2 (ENSPEMG00000019821) #25 ENSPEMG00000021666 Vldlr (ENSPEMG00000022250) #26 Kcnv2 (ENSPEMG00000020138) #27 ENSPEMG00000030423 ENSPEMG00000019340 #28 Rfx3 (ENSPEMG00000019731) #29 Glis3 (ENSPEMG00000020002) #30 ENSPEMG00000004286 Slc1a1 (ENSPEMG00000009611) #31 ENSPEMG00000021571 Spata6l (ENSPEMG00000023122) Murinae ANCESTRAL SPECIES ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Mus ANCESTRAL SPECIES ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00900000143396 ENSGT00940000155460 #26 ENSGT00520000061590 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00860000136305 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00900000143396 ENSGT00940000155460 #26 ENSGT00520000061590 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 Mus_B ANCESTRAL SPECIES 16 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00860000136305 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00900000143396 ENSGT00940000155460 #26 ENSGT00520000061590 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 Mus_C ANCESTRAL SPECIES 24 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00860000136305 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00900000143396 ENSGT00940000155460 #26 ENSGT00520000061590 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 Steppe mouse MODERN SPECIES 3345 Cfap95 (ENSMSIG00000011339) Ptar1 (ENSMSIG00000011314) #11 Apba1 (ENSMSIG00000011254) #12 ENSMSIG00000011248 Entrep1 (ENSMSIG00000011206) #13 Tjp2 (ENSMSIG00000010954) #14 Fxn (ENSMSIG00000010910) #15 ENSMSIG00000010906 Pip5k1b (ENSMSIG00000010797) #16 Fam122a (ENSMSIG00000010786) #17 Tmem252 (ENSMSIG00000010774) #18 Pgm5 (ENSMSIG00000010743) #19 Foxd4 (ENSMSIG00000010736) Cbwd1 (ENSMSIG00000010701) #20 Dock8 (ENSMSIG00000010534) #21 Kank1 (ENSMSIG00000010404) #22 Dmrt1 (ENSMSIG00000010363) #23 Dmrt3 (ENSMSIG00000010354) Dmrt2 (ENSMSIG00000010341) #24 spretus MODERN SPECIES 10 Mamdc2 (MGP_SPRETEiJ_G0023741) #10 Cfap95 (MGP_SPRETEiJ_G0023742) Ptar1 (MGP_SPRETEiJ_G0023743) #11 MGP_SPRETEiJ_G0023744 Apba1 (MGP_SPRETEiJ_G0023745) #12 Entrep1 (MGP_SPRETEiJ_G0023746) #13 Tjp2 (MGP_SPRETEiJ_G0023747) #14 Fxn (MGP_SPRETEiJ_G0023748) #15 Pip5k1b (MGP_SPRETEiJ_G0023749) #16 Fam122a (MGP_SPRETEiJ_G0023750) #17 Tmem252 (MGP_SPRETEiJ_G0023751) #18 Pgm5 (MGP_SPRETEiJ_G0023752) #19 Foxd4 (MGP_SPRETEiJ_G0023753) Cbwd1 (MGP_SPRETEiJ_G0023754) #20 Dock8 (MGP_SPRETEiJ_G0023755) #21 Kank1 (MGP_SPRETEiJ_G0023756) #22 Dmrt3 (MGP_SPRETEiJ_G0023757) Dmrt2 (MGP_SPRETEiJ_G0023758) #24 Smarca2 (MGP_SPRETEiJ_G0023759) #25 MGP_SPRETEiJ_G0023760 Vldlr (MGP_SPRETEiJ_G0023761) #26 Kcnv2 (MGP_SPRETEiJ_G0023762) #27 Pum3 (MGP_SPRETEiJ_G0023763) #28 Rfx3 (MGP_SPRETEiJ_G0023764) #29 Glis3 (MGP_SPRETEiJ_G0023765) #30 Slc1a1 (MGP_SPRETEiJ_G0023766) #31 Spata6l (MGP_SPRETEiJ_G0023767) Plpp6 (MGP_SPRETEiJ_G0023768) #32 Cdc37l1 (MGP_SPRETEiJ_G0023769) #33 Ak3 (MGP_SPRETEiJ_G0023770) #34 Rcl1 (MGP_SPRETEiJ_G0023771) #35 Mouse MODERN SPECIES 10 Mamdc2 (ENSMUSG00000033207) #10 Cfap95 (ENSMUSG00000033053) Ptar1 (ENSMUSG00000074925) #11 Apba1 (ENSMUSG00000024897) #12 Entrep1 (ENSMUSG00000071604) #13 Tjp2 (ENSMUSG00000024812) #14 Fxn (ENSMUSG00000059363) #15 Pip5k1b (ENSMUSG00000024867) #16 Fam122a (ENSMUSG00000074922) #17 Tmem252 (ENSMUSG00000048572) #18 Pgm5 (ENSMUSG00000041731) #19 Gm10053 (ENSMUSG00000058927) Foxd4 (ENSMUSG00000051490) Cbwd1 (ENSMUSG00000024878) #20 Dock8 (ENSMUSG00000052085) #21 Kank1 (ENSMUSG00000032702) #22 Dmrt1 (ENSMUSG00000024837) #23 Dmrt3 (ENSMUSG00000042372) Dmrt2 (ENSMUSG00000048138) #24 Smarca2 (ENSMUSG00000024921) #25 Gm815 (ENSMUSG00000074913) Vldlr (ENSMUSG00000024924) #26 Kcnv2 (ENSMUSG00000047298) #27 Pum3 (ENSMUSG00000041360) #28 Rfx3 (ENSMUSG00000040929) #29 Glis3 (ENSMUSG00000052942) #30 Slc1a1 (ENSMUSG00000024935) #31 Spata6l (ENSMUSG00000064202) Plpp6 (ENSMUSG00000040105) #32 Cdc37l1 (ENSMUSG00000024780) #33 Ak3 (ENSMUSG00000024782) #34 Ryukyu mouse MODERN SPECIES 10 Mamdc2 (MGP_CAROLIEiJ_G0022822) #10 Cfap95 (MGP_CAROLIEiJ_G0022823) Ptar1 (MGP_CAROLIEiJ_G0022824) #11 MGP_CAROLIEiJ_G0022825 Apba1 (MGP_CAROLIEiJ_G0022826) #12 Entrep1 (MGP_CAROLIEiJ_G0022827) #13 Tjp2 (MGP_CAROLIEiJ_G0022828) #14 Fxn (MGP_CAROLIEiJ_G0022829) #15 Pip5k1b (MGP_CAROLIEiJ_G0022830) #16 Fam122a (MGP_CAROLIEiJ_G0022831) #17 Tmem252 (MGP_CAROLIEiJ_G0022832) #18 Pgm5 (MGP_CAROLIEiJ_G0022833) #19 Foxd4 (MGP_CAROLIEiJ_G0022834) Cbwd1 (MGP_CAROLIEiJ_G0022835) #20 Dock8 (MGP_CAROLIEiJ_G0022836) #21 Kank1 (MGP_CAROLIEiJ_G0022837) #22 Dmrt1 (MGP_CAROLIEiJ_G0022838) #23 Dmrt3 (MGP_CAROLIEiJ_G0022839) Dmrt2 (MGP_CAROLIEiJ_G0022840) #24 Smarca2 (MGP_CAROLIEiJ_G0022841) #25 MGP_CAROLIEiJ_G0022842 Vldlr (MGP_CAROLIEiJ_G0022843) #26 Kcnv2 (MGP_CAROLIEiJ_G0022844) #27 Pum3 (MGP_CAROLIEiJ_G0022845) #28 Rfx3 (MGP_CAROLIEiJ_G0022846) #29 Glis3 (MGP_CAROLIEiJ_G0022847) #30 Slc1a1 (MGP_CAROLIEiJ_G0022848) #31 Spata6l (MGP_CAROLIEiJ_G0022849) Plpp6 (MGP_CAROLIEiJ_G0022850) #32 Cdc37l1 (MGP_CAROLIEiJ_G0022851) #33 Ak3 (MGP_CAROLIEiJ_G0022852) #34 Shrew mouse MODERN SPECIES Klf9 (MGP_PahariEiJ_G0014314) #8 Smc5 (MGP_PahariEiJ_G0014315) #9 Mamdc2 (MGP_PahariEiJ_G0014316) #10 Cfap95 (MGP_PahariEiJ_G0014317) Ptar1 (MGP_PahariEiJ_G0014318) #11 Apba1 (MGP_PahariEiJ_G0014319) #12 Entrep1 (MGP_PahariEiJ_G0014320) #13 Tjp2 (MGP_PahariEiJ_G0014321) #14 MGP_PahariEiJ_G0014322 #15 Fam122a (MGP_PahariEiJ_G0014324) #17 Tmem252 (MGP_PahariEiJ_G0014325) #18 Pgm5 (MGP_PahariEiJ_G0014326) #19 Foxd4 (MGP_PahariEiJ_G0014327) Cbwd1 (MGP_PahariEiJ_G0014328) #20 Dock8 (MGP_PahariEiJ_G0014329) #21 Kank1 (MGP_PahariEiJ_G0014330) #22 Dmrt1 (MGP_PahariEiJ_G0014331) #23 Dmrt3 (MGP_PahariEiJ_G0014332) Dmrt2 (MGP_PahariEiJ_G0014333) #24 Smarca2 (MGP_PahariEiJ_G0014334) #25 MGP_PahariEiJ_G0014335 Vldlr (MGP_PahariEiJ_G0014336) #26 Kcnv2 (MGP_PahariEiJ_G0014337) #27 Pum3 (MGP_PahariEiJ_G0014338) #28 Rfx3 (MGP_PahariEiJ_G0014339) #29 Glis3 (MGP_PahariEiJ_G0014340) #30 Slc1a1 (MGP_PahariEiJ_G0014341) #31 Spata6l (MGP_PahariEiJ_G0014342) Plpp6 (MGP_PahariEiJ_G0014343) #32 Cdc37l1 (MGP_PahariEiJ_G0014344) #33 Ak3 (MGP_PahariEiJ_G0014345) #34 Rat MODERN SPECIES Mamdc2 (ENSRNOG00000024620) #10 Cfap95 (ENSRNOG00000036615) Ptar1 (ENSRNOG00000014891) #11 Apba1 (ENSRNOG00000014928) #12 Entrep1 (ENSRNOG00000061147) #13 Tjp2 (ENSRNOG00000015030) #14 Fxn (ENSRNOG00000015213) #15 Pip5k1b (ENSRNOG00000015232) #16 Pabir1 (ENSRNOG00000051051) #17 Tmem252 (ENSRNOG00000025476) #18 Pgm5 (ENSRNOG00000015406) #19 Foxd4 (ENSRNOG00000050486) Zng1a (ENSRNOG00000015516) #20 Dock8 (ENSRNOG00000015894) #21 Hmgb1-ps4 (ENSRNOG00000065098) Kank1 (ENSRNOG00000016023) #22 Dmrt1 (ENSRNOG00000016075) #23 Dmrt3 (ENSRNOG00000016284) Dmrt2 (ENSRNOG00000016301) #24 ENSRNOG00000062555 Smarca2 (ENSRNOG00000011931) #25 ENSRNOG00000069446 Vldlr (ENSRNOG00000027491) #26 ENSRNOG00000062591 Kcnv2 (ENSRNOG00000012566) #27 Pum3 (ENSRNOG00000012574) #28 Rfx3 (ENSRNOG00000014486) #29 ENSRNOG00000066761 Glis3 (ENSRNOG00000014768) #30 Slc1a1 (ENSRNOG00000014816) #31 ENSRNOG00000065811 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1026 ENSNGAG00000019946 #22 ENSNGAG00000009667 Upper Galilee mountains blind mole rat MODERN SPECIES 994 ENSNGAG00000016775 ENSNGAG00000001837 #22 ENSNGAG00000005862 ENSNGAG00000012874 ENSNGAG00000014855 ENSNGAG00000000860 Rorb (ENSNGAG00000007086) Trpm6 (ENSNGAG00000005371) D030056L22Rik (ENSNGAG00000015165) Carnmt1 (ENSNGAG00000013885) Nmrk1 (ENSNGAG00000019838) Ostf1 (ENSNGAG00000020920) Rodentia_A ANCESTRAL SPECIES 11 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Hystricomorpha ANCESTRAL SPECIES 46 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Hystricomorpha_a ANCESTRAL SPECIES 53 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b.d #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00900000143153 ENSGT00940000155397.b #31 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Hystricomorpha_b ANCESTRAL SPECIES 71 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b.d #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00940000155397.b #31 ENSGT00900000143153 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Long-tailed chinchilla MODERN SPECIES 141 SMC5 (ENSCLAG00000005780) #9 MAMDC2 (ENSCLAG00000004597) #10 ENSCLAG00000005394 CFAP95 (ENSCLAG00000007041) PTAR1 (ENSCLAG00000008830) #11 APBA1 (ENSCLAG00000006043) #12 ENTREP1 (ENSCLAG00000007506) #13 TJP2 (ENSCLAG00000012841) #14 FXN (ENSCLAG00000009225) #15 PIP5K1B (ENSCLAG00000011292) #16 TMEM252 (ENSCLAG00000005523) #18 PGM5 (ENSCLAG00000005854) #19 ENSCLAG00000006762 ENSCLAG00000005076 #20 DOCK8 (ENSCLAG00000005204) #21 KANK1 (ENSCLAG00000015509) #22 DMRT1 (ENSCLAG00000015238) #23 DMRT3 (ENSCLAG00000015537) DMRT2 (ENSCLAG00000006168) #24 SMARCA2 (ENSCLAG00000014484) #25 VLDLR (ENSCLAG00000007543) #26 KCNV2 (ENSCLAG00000013226) #27 PUM3 (ENSCLAG00000011892) #28 RFX3 (ENSCLAG00000009044) #29 GLIS3 (ENSCLAG00000008116) #30 ENSCLAG00000009238 SLC1A1 (ENSCLAG00000009832) #31 ENSCLAG00000009476 SPATA6L (ENSCLAG00000010497) PLPP6 (ENSCLAG00000017735) #32 CDC37L1 (ENSCLAG00000005805) #33 Degu MODERN SPECIES 128 ENSODEG00000019033 APBA1 (ENSODEG00000004217) #12 ENTREP1 (ENSODEG00000004348) #13 TJP2 (ENSODEG00000004420) #14 FXN (ENSODEG00000003413) #15 PIP5K1B (ENSODEG00000003585) #16 ENSODEG00000003739 PABIR1 (ENSODEG00000019013) #17 TMEM252 (ENSODEG00000003841) #18 PGM5 (ENSODEG00000003917) #19 ENSODEG00000003983 #20 ENSODEG00000004467 #21 ENSODEG00000004602 #21 ENSODEG00000004711 #21 ENSODEG00000004719 KANK1 (ENSODEG00000004766) #22 DMRT1 (ENSODEG00000004898) #23 DMRT3 (ENSODEG00000004984) DMRT2 (ENSODEG00000004992) #24 SMARCA2 (ENSODEG00000005452) #25 ENSODEG00000006378 ENSODEG00000003492 #26 KCNV2 (ENSODEG00000003536) #27 ENSODEG00000003625 #28 RFX3 (ENSODEG00000003682) #29 GLIS3 (ENSODEG00000003731) #30 SLC1A1 (ENSODEG00000003884) #31 ENSODEG00000003949 SPATA6L (ENSODEG00000004066) PLPP6 (ENSODEG00000019026) #32 CDC37L1 (ENSODEG00000004185) #33 Guinea pig MODERN SPECIES 21 KLF9 (ENSCPOG00000031222) #8 SMC5 (ENSCPOG00000000198) #9 MAMDC2 (ENSCPOG00000002432) #10 CFAP95 (ENSCPOG00000006639) PTAR1 (ENSCPOG00000008368) #11 APBA1 (ENSCPOG00000032780) #12 ENTREP1 (ENSCPOG00000003236) #13 TJP2 (ENSCPOG00000021062) #14 FXN (ENSCPOG00000004293) #15 PIP5K1B (ENSCPOG00000004288) #16 PABIR1 (ENSCPOG00000003280) #17 TMEM252 (ENSCPOG00000013771) #18 PGM5 (ENSCPOG00000015031) #19 ENSCPOG00000019718 #20 DOCK8 (ENSCPOG00000008366) #21 KANK1 (ENSCPOG00000008389) #22 DMRT1 (ENSCPOG00000005909) #23 DMRT3 (ENSCPOG00000005912) DMRT2 (ENSCPOG00000008452) #24 SMARCA2 (ENSCPOG00000005475) #25 VLDLR (ENSCPOG00000007685) #26 KCNV2 (ENSCPOG00000032893) #27 ENSCPOG00000008552 #28 RFX3 (ENSCPOG00000000900) #29 GLIS3 (ENSCPOG00000005523) #30 ENSCPOG00000030794 SLC1A1 (ENSCPOG00000011151) #31 PLPP6 (ENSCPOG00000012931) #32 SPATA6L (ENSCPOG00000012925) CDC37L1 (ENSCPOG00000030938) #33 AK3 (ENSCPOG00000011927) #34 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000031959 TJP2 (ENSHGLG00000015590) #14 FXN (ENSHGLG00000013859) #15 PIP5K1B (ENSHGLG00000015519) #16 PABIR1 (ENSHGLG00000021429) #17 ENSHGLG00000045896 ENSHGLG00000040794 TMEM252 (ENSHGLG00000033131) #18 PGM5 (ENSHGLG00000013086) #19 ENSHGLG00000046909 CBWD3 (ENSHGLG00000015962) #20 ENSHGLG00000020779 DOCK8 (ENSHGLG00000016578) #21 ENSHGLG00000050403 ENSHGLG00000045832 KANK1 (ENSHGLG00000012000) #22 DMRT1 (ENSHGLG00000043033) #23 DMRT3 (ENSHGLG00000012858) ENSHGLG00000033430 #24 ENSHGLG00000036415 ENSHGLG00000035319 ENSHGLG00000013697 ENSHGLG00000005215 #25 ENSHGLG00000035043 ENSHGLG00000016566 VLDLR (ENSHGLG00000016113) #26 KCNV2 (ENSHGLG00000015810) #27 ENSHGLG00000015868 #28 ENSHGLG00000016314 ENSHGLG00000042585 ENSHGLG00000019207 Sciuridae ANCESTRAL SPECIES 6 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00900000143153 ENSGT00940000155397.b #31 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Marmotini ANCESTRAL SPECIES 1 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00900000143153 ENSGT00940000155397.b #31 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Marmotini_b ANCESTRAL SPECIES 88 ENSGT00550000074816.B #9 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000154821.b #25 ENSGT00520000061590 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT01050000244879.a.a.b #29 ENSGT00940000156896 #30 ENSGT00900000143153 ENSGT00940000155397.b #31 ENSGT00530000063821.b.b ENSGT00940000160907 #32 ENSGT00390000013443.d #33 Arctic ground squirrel MODERN SPECIES 568 ENSUPAG00010016844 KANK1 (ENSUPAG00010016810) #22 DMRT1 (ENSUPAG00010016791) #23 DMRT3 (ENSUPAG00010016785) CYP51A1 (ENSUPAG00010016765) LRRD1 (ENSUPAG00010016745) KRIT1 (ENSUPAG00010016644) ANKIB1 (ENSUPAG00010016604) ENSUPAG00010016589 GATAD1 (ENSUPAG00010016577) PEX1 (ENSUPAG00010016509) RBM48 (ENSUPAG00010016502) ENSUPAG00010016496 Squirrel MODERN SPECIES 103 CFAP95 (ENSSTOG00000012360) PTAR1 (ENSSTOG00000012685) #11 APBA1 (ENSSTOG00000012678) #12 ENTREP1 (ENSSTOG00000012667) #13 TJP2 (ENSSTOG00000011181) #14 ENSSTOG00000033140 #15 PIP5K1B (ENSSTOG00000023540) #16 PABIR1 (ENSSTOG00000022211) #17 TMEM252 (ENSSTOG00000008860) #18 PGM5 (ENSSTOG00000008834) #19 ENSSTOG00000029964 ENSSTOG00000028764 #20 ENSSTOG00000031824 DOCK8 (ENSSTOG00000016411) #21 ENSSTOG00000030036 KANK1 (ENSSTOG00000010218) #22 DMRT1 (ENSSTOG00000010235) #23 DMRT3 (ENSSTOG00000023574) DMRT2 (ENSSTOG00000026909) #24 SMARCA2 (ENSSTOG00000006812) #25 ENSSTOG00000031987 VLDLR (ENSSTOG00000006880) #26 KCNV2 (ENSSTOG00000020003) #27 PUM3 (ENSSTOG00000009586) #28 RFX3 (ENSSTOG00000006974) #29 GLIS3 (ENSSTOG00000000302) #30 ENSSTOG00000031708 SLC1A1 (ENSSTOG00000023583) #31 PLPP6 (ENSSTOG00000025831) #32 SPATA6L (ENSSTOG00000000018) CDC37L1 (ENSSTOG00000000020) #33 Alpin marmot MODERN SPECIES 32 PTAR1 (ENSMMMG00000011070) #11 APBA1 (ENSMMMG00000011033) #12 ENSMMMG00000011022 #13 TJP2 (ENSMMMG00000003727) #14 ENSMMMG00000003616 FXN (ENSMMMG00000003605) #15 PIP5K1B (ENSMMMG00000003495) #16 PABIR1 (ENSMMMG00000003490) #17 TMEM252 (ENSMMMG00000003476) #18 PGM5 (ENSMMMG00000003460) #19 ENSMMMG00000003446 ENSMMMG00000003411 #20 DOCK8 (ENSMMMG00000003328) #21 ENSMMMG00000003304 ENSMMMG00000003301 KANK1 (ENSMMMG00000003281) #22 DMRT1 (ENSMMMG00000003270) #23 DMRT3 (ENSMMMG00000003239) DMRT2 (ENSMMMG00000003238) #24 ENSMMMG00000003212 SMARCA2 (ENSMMMG00000002811) #25 ENSMMMG00000002785 ENSMMMG00000002765 VLDLR (ENSMMMG00000002594) #26 ENSMMMG00000002572 KCNV2 (ENSMMMG00000002550) #27 PUM3 (ENSMMMG00000002513) #28 ENSMMMG00000002504 GLIS3 (ENSMMMG00000002430) #30 ENSMMMG00000002416 ENSMMMG00000002405 Eurasian red squirrel MODERN SPECIES 6 MAMDC2 (ENSSVLG00005021856) #10 CFAP95 (ENSSVLG00005021956) PTAR1 (ENSSVLG00005022066) #11 APBA1 (ENSSVLG00005022160) #12 ENTREP1 (ENSSVLG00005022461) #13 TJP2 (ENSSVLG00005022528) #14 ENSSVLG00005022798 #15 PIP5K1B (ENSSVLG00005022876) #16 PABIR1 (ENSSVLG00005023031) #17 TMEM252 (ENSSVLG00005023049) #18 PGM5 (ENSSVLG00005023081) #19 ENSSVLG00005023212 ENSSVLG00005023230 #20 ENSSVLG00005023280 DOCK8 (ENSSVLG00005023344) #21 KANK1 (ENSSVLG00005023807) #22 DMRT1 (ENSSVLG00005023845) #23 DMRT3 (ENSSVLG00005023888) DMRT2 (ENSSVLG00005023918) #24 SMARCA2 (ENSSVLG00005024009) #25 ENSSVLG00005024201 VLDLR (ENSSVLG00005024232) #26 KCNV2 (ENSSVLG00005024318) #27 PUM3 (ENSSVLG00005024338) #28 ENSSVLG00005024401 RFX3 (ENSSVLG00005024420) #29 GLIS3 (ENSSVLG00005024543) #30 SLC1A1 (ENSSVLG00005024569) #31 SPATA6L (ENSSVLG00005024615) PLPP6 (ENSSVLG00005024689) #32 CDC37L1 (ENSSVLG00005024699) #33 Lagomorpha ANCESTRAL SPECIES 77 ENSGT01100000263667 ENSGT00940000156117 #10 ENSGT00390000014593 ENSGT00390000017892 #11 ENSGT00940000156820.a.a #12 ENSGT00530000063335.B.a.b #13 ENSGT00940000158634 #14 ENSGT00390000005811 #15 ENSGT00940000156639 #16 ENSGT00390000015476.d.b #17 ENSGT00390000005250 #18 ENSGT00940000158126 #19 ENSGT00940000163353 ENSGT00640000091523 #20 ENSGT00940000155876 #21 ENSGT00940000154886.a.a #22 ENSGT00940000156489.n #23 ENSGT00940000160420 ENSGT00940000156282.a.a #24 ENSGT00940000155460 #26 ENSGT00940000157438 #27 ENSGT00390000015757 #28 ENSGT00940000164013 Rabbit MODERN SPECIES ENSOCUG00000021364 MAMDC2 (ENSOCUG00000000271) #10 CFAP95 (ENSOCUG00000008788) PTAR1 (ENSOCUG00000012575) #11 ENSOCUG00000013515 #12 ENTREP1 (ENSOCUG00000013503) #13 TJP2 (ENSOCUG00000013019) #14 FXN (ENSOCUG00000015076) #15 PIP5K1B (ENSOCUG00000015811) #16 PABIR1 (ENSOCUG00000002637) #17 ENSOCUG00000014142 #18 PGM5 (ENSOCUG00000014125) #19 ENSOCUG00000010467 ENSOCUG00000000733 #20 DOCK8 (ENSOCUG00000003208) #21 KANK1 (ENSOCUG00000004753) #22 ENSOCUG00000036685 DMRT3 (ENSOCUG00000004582) ENSOCUG00000027863 DMRT2 (ENSOCUG00000003299) #24 ENSOCUG00000037388 ENSOCUG00000034834 ENSOCUG00000023438 ENSOCUG00000035677 ENSOCUG00000000241 SMARCA2 (ENSOCUG00000006320) #25 ENSOCUG00000022775 VLDLR (ENSOCUG00000002231) #26 KCNV2 (ENSOCUG00000004385) #27 ENSOCUG00000004189 #28 ENSOCUG00000039572 Pika MODERN SPECIES 352 ENSOPRG00000005395 #22