Murinae	ANCESTRAL SPECIES		ENSGT00390000005889	ENSGT00940000156000 #7	ENSGT00950000182937.A.a #8	ENSGT00390000014666.b #9	ENSGT00940000163402 #10	ENSGT00940000158235 #11	ENSGT00950000183088.a.b.a #12	ENSGT00940000161741 #13	ENSGT00390000008454 #14	ENSGT00390000002223 #15	ENSGT01100000263540.B.c #16	ENSGT00940000157049 #17	ENSGT00940000157556 #18	ENSGT00950000183082.b.b.b #19	ENSGT00940000157525 #20	ENSGT00390000004874.a.a #22	ENSGT00390000015298 #23	ENSGT00390000011684 #24	ENSGT00940000157042 #25	ENSGT00530000063711.b #26	ENSGT00390000013726 #27	ENSGT00390000000134.a #28	ENSGT00940000160608 #30	ENSGT00390000013298 #31	ENSGT00510000049375	ENSGT00510000049872 #33	ENSGT00390000010434.b #34	ENSGT00730000111173 #35	ENSGT00390000015820 #36	ENSGT00530000063604.A #37	ENSGT00940000153956.b
Rat	MODERN SPECIES		Cwf19l1 (ENSRNOG00000012763) #7	Chuk (ENSRNOG00000022485) #8	Erlin1 (ENSRNOG00000012911) #9	Cyp2c23 (ENSRNOG00000013291) #10	Cpn1 (ENSRNOG00000013439) #11	Dnmbp (ENSRNOG00000050742) #12	Abcc2 (ENSRNOG00000046727) #13	Cutc (ENSRNOG00000017298) #14	Cox15 (ENSRNOG00000017230) #15	Entpd7 (ENSRNOG00000016883) #16	Slc25a28 (ENSRNOG00000016751) #17	Nkx2-3 (ENSRNOG00000016656) #18	Got1 (ENSRNOG00000016356) #19	Cnnm1 (ENSRNOG00000016302) #20	ENSRNOG00000065211 #21	Hpse2 (ENSRNOG00000064037) #22	Hps1 (ENSRNOG00000045838) #23	Pyroxd2 (ENSRNOG00000015807) #24	Loxl4 (ENSRNOG00000015727) #25	R3hcc1l (ENSRNOG00000051256) #26	Crtac1 (ENSRNOG00000015220) #27	Golga7b (ENSRNOG00000015051) #28	AABR07006871.1 (ENSRNOG00000053536) #29	Sfrp5 (ENSRNOG00000014940) #30	Zfyve27 (ENSRNOG00000014903) #31	Marveld1 (ENSRNOG00000042620) #32	Avpi1 (ENSRNOG00000014828) #33	Pi4k2a (ENSRNOG00000014675) #34	Morn4 (ENSRNOG00000027156) #35	MGC93861 (ENSRNOG00000069762) #36	Hoga1 (ENSRNOG00000029501) #37
Mus	ANCESTRAL SPECIES		ENSGT00390000005889	ENSGT00940000156000 #7	ENSGT00950000182937.A.a #8	ENSGT00390000014666.b #9	ENSGT00940000163402 #10	ENSGT00940000158235 #11	ENSGT00950000183088.a.b.a #12	ENSGT00940000161741 #13	ENSGT00390000008454 #14	ENSGT00390000002223 #15	ENSGT01100000263540.B.c #16	ENSGT00940000157049 #17	ENSGT00940000157556 #18	ENSGT00950000183082.b.b.b #19	ENSGT00940000157525 #20	ENSGT00390000004874.a.a #22	ENSGT00390000015298 #23	ENSGT00390000011684 #24	ENSGT00940000157042 #25	ENSGT00530000063711.b #26	ENSGT00390000013726 #27	ENSGT00390000000134.a #28	ENSGT00940000160608 #30	ENSGT00390000013298 #31	ENSGT00510000049375	ENSGT00510000049872 #33	ENSGT00390000010434.b #34	ENSGT00730000111173 #35	ENSGT00390000015820 #36	ENSGT00530000063604.A #37	ENSGT00940000153956.b
Shrew mouse	MODERN SPECIES		Bloc1s2 (MGP_PahariEiJ_G0014483)	Cwf19l1 (MGP_PahariEiJ_G0014482) #7	Chuk (MGP_PahariEiJ_G0014481) #8	Erlin1 (MGP_PahariEiJ_G0014480) #9	Cyp2c23 (MGP_PahariEiJ_G0014479) #10	Cpn1 (MGP_PahariEiJ_G0014478) #11	Dnmbp (MGP_PahariEiJ_G0014477) #12	Abcc2 (MGP_PahariEiJ_G0014476) #13	Cutc (MGP_PahariEiJ_G0014475) #14	Cox15 (MGP_PahariEiJ_G0014474) #15	Entpd7 (MGP_PahariEiJ_G0014473) #16	Slc25a28 (MGP_PahariEiJ_G0014472) #17	Nkx2-3 (MGP_PahariEiJ_G0014471) #18	Got1 (MGP_PahariEiJ_G0014470) #19	Cnnm1 (MGP_PahariEiJ_G0014469) #20	Hpse2 (MGP_PahariEiJ_G0014468) #22	Hps1 (MGP_PahariEiJ_G0014467) #23	Pyroxd2 (MGP_PahariEiJ_G0014466) #24	Loxl4 (MGP_PahariEiJ_G0014465) #25	R3hcc1l (MGP_PahariEiJ_G0014464) #26	Crtac1 (MGP_PahariEiJ_G0014463) #27	Golga7b (MGP_PahariEiJ_G0014462) #28	Sfrp5 (MGP_PahariEiJ_G0014461) #30	Zfyve27 (MGP_PahariEiJ_G0014460) #31	Marveld1 (MGP_PahariEiJ_G0014459)	Avpi1 (MGP_PahariEiJ_G0014458) #33	Pi4k2a (MGP_PahariEiJ_G0014457) #34	Morn4 (MGP_PahariEiJ_G0014456) #35	4933411K16Rik (MGP_PahariEiJ_G0014455) #36	Hoga1 (MGP_PahariEiJ_G0014454) #37	Ankrd2 (MGP_PahariEiJ_G0014453)
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000005889	ENSGT00940000156000 #7	ENSGT00950000182937.A.a #8	ENSGT00390000014666.b #9	ENSGT00940000163402 #10	ENSGT00940000158235 #11	ENSGT00950000183088.a.b.a #12	ENSGT00940000161741 #13	ENSGT00390000008454 #14	ENSGT00390000002223 #15	ENSGT01100000263540.B.c #16	ENSGT00940000157049 #17	ENSGT00940000157556 #18	ENSGT00950000183082.b.b.b #19	ENSGT00940000157525 #20	ENSGT00390000004874.a.a #22	ENSGT00390000015298 #23	ENSGT00390000011684 #24	ENSGT00940000157042 #25	ENSGT00530000063711.b #26	ENSGT00390000013726 #27	ENSGT00390000000134.a #28	ENSGT00940000160608 #30	ENSGT00390000013298 #31	ENSGT00510000049375	ENSGT00510000049872 #33	ENSGT00390000010434.b #34	ENSGT00730000111173 #35	ENSGT00390000015820 #36	ENSGT00530000063604.A #37	ENSGT00940000153956.b
Ryukyu mouse	MODERN SPECIES	10	Bloc1s2 (MGP_CAROLIEiJ_G0022993)	Cwf19l1 (MGP_CAROLIEiJ_G0022992) #7	Chuk (MGP_CAROLIEiJ_G0022991) #8	Erlin1 (MGP_CAROLIEiJ_G0022990) #9	Cyp2c23 (MGP_CAROLIEiJ_G0022989) #10	Cpn1 (MGP_CAROLIEiJ_G0022988) #11	Dnmbp (MGP_CAROLIEiJ_G0022987) #12	Abcc2 (MGP_CAROLIEiJ_G0022986) #13	Cutc (MGP_CAROLIEiJ_G0022985) #14	Cox15 (MGP_CAROLIEiJ_G0022984) #15	Entpd7 (MGP_CAROLIEiJ_G0022983) #16	Slc25a28 (MGP_CAROLIEiJ_G0022982) #17	Nkx2-3 (MGP_CAROLIEiJ_G0022981) #18	Got1 (MGP_CAROLIEiJ_G0022980) #19	Cnnm1 (MGP_CAROLIEiJ_G0022979) #20	Hpse2 (MGP_CAROLIEiJ_G0022978) #22	Hps1 (MGP_CAROLIEiJ_G0022977) #23	Pyroxd2 (MGP_CAROLIEiJ_G0022976) #24	Loxl4 (MGP_CAROLIEiJ_G0022975) #25	R3hcc1l (MGP_CAROLIEiJ_G0022974) #26	Crtac1 (MGP_CAROLIEiJ_G0022973) #27	Golga7b (MGP_CAROLIEiJ_G0022972) #28	Sfrp5 (MGP_CAROLIEiJ_G0022971) #30	Zfyve27 (MGP_CAROLIEiJ_G0022970) #31	Marveld1 (MGP_CAROLIEiJ_G0022969)	Avpi1 (MGP_CAROLIEiJ_G0022968) #33	Pi4k2a (MGP_CAROLIEiJ_G0022967) #34	Morn4 (MGP_CAROLIEiJ_G0022966) #35	4933411K16Rik (MGP_CAROLIEiJ_G0022965) #36	Hoga1 (MGP_CAROLIEiJ_G0022964) #37	Ankrd2 (MGP_CAROLIEiJ_G0022963)
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000005889	ENSGT00940000156000 #7	ENSGT00950000182937.A.a #8	ENSGT00390000014666.b #9	ENSGT00940000163402 #10	ENSGT00940000158235 #11	ENSGT00950000183088.a.b.a #12	ENSGT00940000161741 #13	ENSGT00390000008454 #14	ENSGT00390000002223 #15	ENSGT01100000263540.B.c #16	ENSGT00940000157049 #17	ENSGT00940000157556 #18	ENSGT00950000183082.b.b.b #19	ENSGT00940000157525 #20	ENSGT00390000004874.a.a #22	ENSGT00390000015298 #23	ENSGT00390000011684 #24	ENSGT00940000157042 #25	ENSGT00530000063711.b #26	ENSGT00390000013726 #27	ENSGT00390000000134.a #28	ENSGT00940000160608 #30	ENSGT00390000013298 #31	ENSGT00510000049375	ENSGT00510000049872 #33	ENSGT00390000010434.b #34	ENSGT00730000111173 #35	ENSGT00390000015820 #36	ENSGT00530000063604.A #37	ENSGT00940000153956.b
Mouse	MODERN SPECIES	10	Bloc1s2 (ENSMUSG00000057506)	Cwf19l1 (ENSMUSG00000025200) #7	Chuk (ENSMUSG00000025199) #8	Erlin1 (ENSMUSG00000025198) #9	Cyp2c23 (ENSMUSG00000025197) #10	Cpn1 (ENSMUSG00000025196) #11	Dnmbp (ENSMUSG00000025195) #12	Abcc2 (ENSMUSG00000025194) #13	Cutc (ENSMUSG00000025193) #14	Cox15 (ENSMUSG00000040018) #15	Entpd7 (ENSMUSG00000025192) #16	Slc25a28 (ENSMUSG00000040414) #17	Nkx2-3 (ENSMUSG00000044220) #18	Got1 (ENSMUSG00000025190) #19	Cnnm1 (ENSMUSG00000025189) #20	Hpse2 (ENSMUSG00000074852) #22	Hps1 (ENSMUSG00000025188) #23	Pyroxd2 (ENSMUSG00000060224) #24	Loxl4 (ENSMUSG00000025185) #25	R3hcc1l (ENSMUSG00000025184) #26	Crtac1 (ENSMUSG00000042401) #27	Golga7b (ENSMUSG00000042532) #28	Sfrp5 (ENSMUSG00000018822) #30	Zfyve27 (ENSMUSG00000018820) #31	Marveld1 (ENSMUSG00000044345)	Avpi1 (ENSMUSG00000018821) #33	Pi4k2a (ENSMUSG00000025178) #34	Morn4 (ENSMUSG00000049670) #35	4933411K16Rik (ENSMUSG00000090369) #36	Hoga1 (ENSMUSG00000025176) #37	Ankrd2 (ENSMUSG00000025172)
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000005889	ENSGT00940000156000 #7	ENSGT00950000182937.A.a #8	ENSGT00390000014666.b #9	ENSGT00940000163402 #10	ENSGT00940000158235 #11	ENSGT00950000183088.a.b.a #12	ENSGT00940000161741 #13	ENSGT00390000008454 #14	ENSGT00390000002223 #15	ENSGT01100000263540.B.c #16	ENSGT00940000157049 #17	ENSGT00940000157556 #18	ENSGT00950000183082.b.b.b #19	ENSGT00940000157525 #20	ENSGT00390000004874.a.a #22	ENSGT00390000015298 #23	ENSGT00390000011684 #24	ENSGT00940000157042 #25	ENSGT00530000063711.b #26	ENSGT00390000013726 #27	ENSGT00390000000134.a #28	ENSGT00940000160608 #30	ENSGT00390000013298 #31	ENSGT00510000049375	ENSGT00510000049872 #33	ENSGT00390000010434.b #34	ENSGT00730000111173 #35	ENSGT00530000063604.A #37	ENSGT00940000153956.b	ENSGT00940000158630
spretus	MODERN SPECIES	10	Bloc1s2 (MGP_SPRETEiJ_G0023914)	Cwf19l1 (MGP_SPRETEiJ_G0023913) #7	Chuk (MGP_SPRETEiJ_G0023912) #8	Erlin1 (MGP_SPRETEiJ_G0023911) #9	Cyp2c23 (MGP_SPRETEiJ_G0023910) #10	Cpn1 (MGP_SPRETEiJ_G0023909) #11	Dnmbp (MGP_SPRETEiJ_G0023908) #12	Abcc2 (MGP_SPRETEiJ_G0023907) #13	Cutc (MGP_SPRETEiJ_G0023906) #14	Cox15 (MGP_SPRETEiJ_G0023905) #15	Entpd7 (MGP_SPRETEiJ_G0023904) #16	Slc25a28 (MGP_SPRETEiJ_G0023903) #17	Nkx2-3 (MGP_SPRETEiJ_G0023902) #18	Got1 (MGP_SPRETEiJ_G0023901) #19	Cnnm1 (MGP_SPRETEiJ_G0023900) #20	Hpse2 (MGP_SPRETEiJ_G0023899) #22	Hps1 (MGP_SPRETEiJ_G0023898) #23	Pyroxd2 (MGP_SPRETEiJ_G0023897) #24	Loxl4 (MGP_SPRETEiJ_G0023896) #25	R3hcc1l (MGP_SPRETEiJ_G0023895) #26	Crtac1 (MGP_SPRETEiJ_G0023894) #27	Golga7b (MGP_SPRETEiJ_G0023893) #28	Sfrp5 (MGP_SPRETEiJ_G0023892) #30	Zfyve27 (MGP_SPRETEiJ_G0023891) #31	Marveld1 (MGP_SPRETEiJ_G0023890)	Avpi1 (MGP_SPRETEiJ_G0023889) #33	Pi4k2a (MGP_SPRETEiJ_G0023888) #34	Morn4 (MGP_SPRETEiJ_G0023887) #35	4933411K16Rik (MGP_SPRETEiJ_G0023886) #36	Hoga1 (MGP_SPRETEiJ_G0023885) #37	Ankrd2 (MGP_SPRETEiJ_G0023884)
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3102																ENSMSIG00000016731 #22	Hps1 (ENSMSIG00000016547) #23	Pyroxd2 (ENSMSIG00000016509) #24	Loxl4 (ENSMSIG00000016394) #25	R3hcc1l (ENSMSIG00000016349) #26	Crtac1 (ENSMSIG00000016325) #27	ENSMSIG00000016305 #28	Sfrp5 (ENSMSIG00000016290) #30	Zfyve27 (ENSMSIG00000016227) #31	ENSMSIG00000016220	Marveld1 (ENSMSIG00000016215)	Avpi1 (ENSMSIG00000016198) #33	Pi4k2a (ENSMSIG00000016167) #34	Morn4 (ENSMSIG00000016140) #35	Hoga1 (ENSMSIG00000016124) #37	Ankrd2 (ENSMSIG00000016098)
Steppe mouse	MODERN SPECIES	3317	Pkd2l1 (ENSMSIG00000013623)	ENSMSIG00000013690	Cwf19l1 (ENSMSIG00000013717) #7	Chuk (ENSMSIG00000013784) #8	ENSMSIG00000013896 #10	Cpn1 (ENSMSIG00000013970) #11	Dnmbp (ENSMSIG00000013995) #12	Abcc2 (ENSMSIG00000014396) #13	Cutc (ENSMSIG00000014461) #14	Cox15 (ENSMSIG00000014488) #15	Entpd7 (ENSMSIG00000014516) #16	Slc25a28 (ENSMSIG00000014549) #17	Nkx2-3 (ENSMSIG00000014564) #18	ENSMSIG00000014579 #19	Cnnm1 (ENSMSIG00000014602) #20	ENSMSIG00000014652 #22	ENSMSIG00000014659