Bilateria	ANCESTRAL SPECIES																	ENSGT00530000063743 #22
Chordata	ANCESTRAL SPECIES																	ENSGT00530000063743 #22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063743.a #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00530000063743.a #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00530000063743.a #22
Sarcopterygii	ANCESTRAL SPECIES	19	ENSGT00940000160241	ENSGT00940000155578	ENSGT00940000153116.B	ENSGT00950000183252	ENSGT00940000153472.a.a	ENSGT00940000159403	ENSGT00570000079101.a.b	ENSGT00390000011937	ENSGT00390000005767.b	ENSGT00390000012669	ENSGT00950000183172.A	ENSGT00390000018018	ENSGT00940000165298	ENSGT00950000182950.D	ENSGT00940000159986	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00390000000999	ENSGT01020000230351.D.a.a.b	ENSGT01020000230351.D.a.b	ENSGT00940000154890.b	ENSGT00390000018674	ENSGT00390000012719.b	ENSGT00940000154717	ENSGT00390000015354.d	ENSGT00940000159285	ENSGT00390000007848.b	ENSGT00940000158903	ENSGT00940000154575.a	ENSGT00530000063474.B.e.a	ENSGT00390000004147
Tetrapoda	ANCESTRAL SPECIES	108												ENSGT00390000005976.b #20	ENSGT00390000012054.a	ENSGT00390000007119 #21	ENSGT00940000163371.b.a.a	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00940000160732	ENSGT00930000151040	ENSGT00940000180015	ENSGT00940000159141	ENSGT00390000011918	ENSGT00390000014062	ENSGT00940000164527.b	ENSGT00940000161676	ENSGT00940000160492	ENSGT00940000159991.B	ENSGT00940000154169.A	ENSGT00940000158525	ENSGT00940000161103	ENSGT00940000159632
Amniota	ANCESTRAL SPECIES	90															ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00930000151040	ENSGT00940000180015	ENSGT00940000159141	ENSGT00390000011918	ENSGT00390000014062	ENSGT00950000183143.c.b	ENSGT00940000161676	ENSGT00940000160492	ENSGT00940000153883.a	ENSGT00940000159991.B	ENSGT00940000154169.A	ENSGT00940000161103	ENSGT00940000158525	ENSGT00940000159632
Mammalia	ANCESTRAL SPECIES	11	ENSGT00940000160498	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00940000164396	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00950000185235	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Theria	ANCESTRAL SPECIES	10	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00940000164396	ENSGT00950000185235	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37
Eutheria	ANCESTRAL SPECIES	25	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT01100000265723	ENSGT00940000175130	ENSGT00940000160628	ENSGT00390000013368 #36
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Primates	ANCESTRAL SPECIES	11	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Haplorrhini	ANCESTRAL SPECIES	30	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Simiiformes	ANCESTRAL SPECIES	19	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37	ENSGT00940000160628
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37	ENSGT00940000160628
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Vervet Monkey	MODERN SPECIES	24	ENSCSAG00000006464 #7	C16orf82 (ENSCSAG00000018857) #8	KDM8 (ENSCSAG00000006451) #9	NSMCE1 (ENSCSAG00000006447) #10	IL4R (ENSCSAG00000006441) #11	IL21R (ENSCSAG00000006436) #12	GTF3C1 (ENSCSAG00000006427) #13	KATNIP (ENSCSAG00000006416) #14	GSG1L (ENSCSAG00000006403) #15	XPO6 (ENSCSAG00000006395) #16	ENSCSAG00000006387 #17	SBK1 (ENSCSAG00000006377) #18	LAT (ENSCSAG00000006374) #19	SPNS1 (ENSCSAG00000006364) #20	NFATC2IP (ENSCSAG00000006345) #21	RABEP2 (ENSCSAG00000006341) #22	ENSCSAG00000006337 #23	ENSCSAG00000006332 #24	ATP2A1 (ENSCSAG00000006327) #25	SH2B1 (ENSCSAG00000006319) #26	TUFM (ENSCSAG00000006314) #27	ATXN2L (ENSCSAG00000006306) #28	ENSCSAG00000006297 #29	CLN3 (ENSCSAG00000006291) #30	APOBR (ENSCSAG00000006282) #31	IL27 (ENSCSAG00000006276) #32	NUPR1 (ENSCSAG00000006271) #33	SGF29 (ENSCSAG00000006259) #34	ENSCSAG00000006238 #35	ENSCSAG00000006205 #36	ENSCSAG00000006200 #37
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Macaca	ANCESTRAL SPECIES	8	ENSGT00910000147036	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00910000148336	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.a	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00910000148336	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00510000047760.y.a #37	ENSGT00940000160628	ENSGT00940000160691
Rhesus	MODERN SPECIES	12	ENSMMUG00000054538	IL4R (ENSMMUG00000004666) #11	IL21R (ENSMMUG00000008252) #12	GTF3C1 (ENSMMUG00000008254) #13	KATNIP (ENSMMUG00000015570) #14	GSG1L (ENSMMUG00000015572) #15	XPO6 (ENSMMUG00000018623) #16	ENSMMUG00000051475	ENSMMUG00000051703	SBK1 (ENSMMUG00000000515) #18	ENSMMUG00000050173	ENSMMUG00000043332 #19	SPNS1 (ENSMMUG00000006922) #20	NFATC2IP (ENSMMUG00000006878) #21	CD19 (ENSMMUG00000006880) ##24	RABEP2 (ENSMMUG00000023527) #22	ENSMMUG00000047100	ATP2A1 (ENSMMUG00000023526) #25	TUFM (ENSMMUG00000003303) #27	ATXN2L (ENSMMUG00000003298) #28	EIF3C (ENSMMUG00000011798) #29	CLN3 (ENSMMUG00000000700) #30	APOBR (ENSMMUG00000000707) #31	IL27 (ENSMMUG00000045351) #32	SGF29 (ENSMMUG00000011370) #34	ENSMMUG00000022334 #35	SULT1A3 (ENSMMUG00000022330)	BOLA2B (ENSMMUG00000007331) #37	CORO1A (ENSMMUG00000007329)	MAPK3 (ENSMMUG00000017758)	GDPD3 (ENSMMUG00000029164)
Crab-eating macaque	MODERN SPECIES	12	NSMCE1 (ENSMFAG00000041758) #10	IL4R (ENSMFAG00000032930) #11	IL21R (ENSMFAG00000001191) #12	GTF3C1 (ENSMFAG00000043052) #13	KATNIP (ENSMFAG00000040082) #14	ENSMFAG00000062423	ENSMFAG00000055232	GSG1L (ENSMFAG00000034217) #15	XPO6 (ENSMFAG00000045067) #16	ENSMFAG00000051789	NFATC2IP (ENSMFAG00000028824) #21	ENSMFAG00000051915	SPNS1 (ENSMFAG00000001593) #20	LAT (ENSMFAG00000034107) #19	CD19 (ENSMFAG00000003219) ##24	RABEP2 (ENSMFAG00000000278) #22	ENSMFAG00000035934	ATP2A1 (ENSMFAG00000048869) #25	SH2B1 (ENSMFAG00000001662) #26	TUFM (ENSMFAG00000033739) #27	ATXN2L (ENSMFAG00000030590) #28	ENSMFAG00000041930 #29	CLN3 (ENSMFAG00000039969) #30	IL27 (ENSMFAG00000033566) #32	SGF29 (ENSMFAG00000038040) #34	ENSMFAG00000045870 #35	ENSMFAG00000059690	ENSMFAG00000046351 #37	CORO1A (ENSMFAG00000030805)	MAPK3 (ENSMFAG00000042040)	GDPD3 (ENSMFAG00000031264)
Pig-tailed macaque	MODERN SPECIES	583										XPO6 (ENSMNEG00000028587) #16	SBK1 (ENSMNEG00000039029) #18	LAT (ENSMNEG00000035112) #19	SPNS1 (ENSMNEG00000041608) #20	NFATC2IP (ENSMNEG00000033558) #21	CD19 (ENSMNEG00000035108) ##24	RABEP2 (ENSMNEG00000028509) #22	ENSMNEG00000039332	ATP2A1 (ENSMNEG00000038916) #25	SH2B1 (ENSMNEG00000043010) #26	TUFM (ENSMNEG00000006031) #27	ATXN2L (ENSMNEG00000032716) #28	ENSMNEG00000023915 #29	CLN3 (ENSMNEG00000036636) #30	APOBR (ENSMNEG00000033686) #31	IL27 (ENSMNEG00000041723) #32	NUPR1 (ENSMNEG00000030099) #33	SGF29 (ENSMNEG00000043534) #34	ENSMNEG00000041916 #35	ENSMNEG00000040788	ENSMNEG00000002226 #36	ENSMNEG00000044402 #37
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Cercopithecinae_d	ANCESTRAL SPECIES	63	ENSGT00910000147036	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991.b ##24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Sooty mangabey	MODERN SPECIES	100	ENSCATG00000035173	KDM8 (ENSCATG00000013458) #9	NSMCE1 (ENSCATG00000018788) #10	IL4R (ENSCATG00000038147) #11	IL21R (ENSCATG00000042693) #12	GTF3C1 (ENSCATG00000038038) #13	KATNIP (ENSCATG00000031487) #14	ENSCATG00000044037	GSG1L (ENSCATG00000044387) #15	XPO6 (ENSCATG00000034030) #16	SBK1 (ENSCATG00000031971) #18	LAT (ENSCATG00000034540) #19	SPNS1 (ENSCATG00000042097) #20	NFATC2IP (ENSCATG00000036741) #21	CD19 (ENSCATG00000034520) ##24	RABEP2 (ENSCATG00000032754) #22	ATP2A1 (ENSCATG00000013850) #25	SH2B1 (ENSCATG00000032329) #26	TUFM (ENSCATG00000035822) #27	ATXN2L (ENSCATG00000021354) #28	ENSCATG00000044296	ENSCATG00000032673 #29	CLN3 (ENSCATG00000043330) #30	APOBR (ENSCATG00000012046) #31	IL27 (ENSCATG00000020274) #32	NUPR1 (ENSCATG00000035804) #33	SGF29 (ENSCATG00000034020) #34	ENSCATG00000031414	ENSCATG00000033081 #35	ENSCATG00000040883 #36	ENSCATG00000037738 #37
Drill	MODERN SPECIES	853		ENSMLEG00000002795	KDM8 (ENSMLEG00000042805) #9	NSMCE1 (ENSMLEG00000035932) #10	IL4R (ENSMLEG00000032586) #11	IL21R (ENSMLEG00000030912) #12	GTF3C1 (ENSMLEG00000033789) #13	KATNIP (ENSMLEG00000042222) #14	ENSMLEG00000027656	GSG1L (ENSMLEG00000038035) #15	XPO6 (ENSMLEG00000029685) #16	LAT (ENSMLEG00000041849) #19	SPNS1 (ENSMLEG00000035270) #20	NFATC2IP (ENSMLEG00000043193) #21	CD19 (ENSMLEG00000028655) ##24	RABEP2 (ENSMLEG00000039533) #22	ATP2A1 (ENSMLEG00000004877) #25	SH2B1 (ENSMLEG00000044400) #26	TUFM (ENSMLEG00000042133) #27	ATXN2L (ENSMLEG00000034087) #28	ENSMLEG00000027529 #29	CLN3 (ENSMLEG00000037225) #30	APOBR (ENSMLEG00000035916) #31	IL27 (ENSMLEG00000025395) #32	NUPR1 (ENSMLEG00000042210) #33	SGF29 (ENSMLEG00000031039) #34	ENSMLEG00000040952 #35	ENSMLEG00000028553 #36	ENSMLEG00000043830 #37	CORO1A (ENSMLEG00000043873)	MAPK3 (ENSMLEG00000034806)
Olive baboon	MODERN SPECIES	9	ENSPANG00000009192	HS3ST4 (ENSPANG00000001142)	C16orf82 (ENSPANG00000032310) #8	KDM8 (ENSPANG00000009107) #9	NSMCE1 (ENSPANG00000019590) #10	IL4R (ENSPANG00000025457) #11	IL21R (ENSPANG00000011264) #12	GTF3C1 (ENSPANG00000007018) #13	KATNIP (ENSPANG00000018771) #14	GSG1L (ENSPANG00000049872) #15	XPO6 (ENSPANG00000017103) #16	SBK1 (ENSPANG00000034348) #18	LAT (ENSPANG00000017105) #19	SPNS1 (ENSPANG00000011263) #20	CD19 (ENSPANG00000008272) #23	RABEP2 (ENSPANG00000016479) #22	ATP2A1 (ENSPANG00000026490) #25	SH2B1 (ENSPANG00000021153) #26	TUFM (ENSPANG00000019624) #27	ATXN2L (ENSPANG00000018770) #28	ENSPANG00000021151 #29	CLN3 (ENSPANG00000020451) #30	APOBR (ENSPANG00000019063) #31	IL27 (ENSPANG00000019065) #32	NUPR1 (ENSPANG00000020541) #33	SGF29 (ENSPANG00000019684) #34	ENSPANG00000039686	ENSPANG00000011067 #36	ENSPANG00000033570 #37	CORO1A (ENSPANG00000011152)	MAPK3 (ENSPANG00000004872)
Rhinopithecus	ANCESTRAL SPECIES	66						ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450.c #35	ENSGT00940000163450.d #35	ENSGT00940000164316	ENSGT00390000013368 #36
Golden snub-nosed monkey	MODERN SPECIES	2693						GTF3C1 (ENSRROG00000036482) #13	KATNIP (ENSRROG00000029325) #14	ENSRROG00000042591	GSG1L (ENSRROG00000037349) #15	XPO6 (ENSRROG00000044864) #16	SBK1 (ENSRROG00000034758) #18	LAT (ENSRROG00000028373) #19	SPNS1 (ENSRROG00000034300) #20	NFATC2IP (ENSRROG00000036489) #21	CD19 (ENSRROG00000045803) #24	RABEP2 (ENSRROG00000042325) #22	ATP2A1 (ENSRROG00000014888) #25	SH2B1 (ENSRROG00000029151) #26	TUFM (ENSRROG00000036858) #27	ATXN2L (ENSRROG00000028547) #28	ENSRROG00000044843	ENSRROG00000043626 #29	CLN3 (ENSRROG00000033678) #30	APOBR (ENSRROG00000043816) #31	IL27 (ENSRROG00000044912) #32	NUPR1 (ENSRROG00000039607) #33	SGF29 (ENSRROG00000044894) #34	ENSRROG00000014837 #35
Black snub-nosed monkey	MODERN SPECIES	2569											SBK1 (ENSRBIG00000038569) #18	LAT (ENSRBIG00000043743) #19	SPNS1 (ENSRBIG00000042143) #20	NFATC2IP (ENSRBIG00000042929) #21	CD19 (ENSRBIG00000043751) #24	RABEP2 (ENSRBIG00000027894) #22	ATP2A1 (ENSRBIG00000043211) #25	SH2B1 (ENSRBIG00000029390) #26	ENSRBIG00000042008 #27	ATXN2L (ENSRBIG00000036712) #28	ENSRBIG00000041735	ENSRBIG00000044009 #29	CLN3 (ENSRBIG00000034690) #30	APOBR (ENSRBIG00000044956) #31	IL27 (ENSRBIG00000044965) #32	NUPR1 (ENSRBIG00000044973) #33	SGF29 (ENSRBIG00000041003) #34	ENSRBIG00000040538 #35	ENSRBIG00000033714 #35	ENSRBIG00000032367	ENSRBIG00000035307 #36
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00910000147036	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795.a #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37	ENSGT00940000160628
Gibbon	MODERN SPECIES	11	ENSNLEG00000031032	KDM8 (ENSNLEG00000011702) #9	NSMCE1 (ENSNLEG00000011677) #10	IL4R (ENSNLEG00000011660) #11	IL21R (ENSNLEG00000011639) #12	GTF3C1 (ENSNLEG00000011614) #13	ENSNLEG00000031951	KATNIP (ENSNLEG00000011610) #14	ENSNLEG00000032301 #15	XPO6 (ENSNLEG00000011518) #16	SBK1 (ENSNLEG00000011516) #18	LAT (ENSNLEG00000011477) #19	SPNS1 (ENSNLEG00000011412) #20	NFATC2IP (ENSNLEG00000011397) #21	CD19 (ENSNLEG00000011325) #24	ENSNLEG00000011308 #22	ATP2A1 (ENSNLEG00000011179) #25	SH2B1 (ENSNLEG00000011102) #26	TUFM (ENSNLEG00000011063) #27	ATXN2L (ENSNLEG00000011004) #28	ENSNLEG00000027661	ENSNLEG00000002152	ALDOA (ENSNLEG00000035720)	PPP4C (ENSNLEG00000002055)	TBX6 (ENSNLEG00000002044)	YPEL3 (ENSNLEG00000001996)	GDPD3 (ENSNLEG00000001992)	ENSNLEG00000001983	CORO1A (ENSNLEG00000001679)	ENSNLEG00000030796	ENSNLEG00000031805 #34
Hominidae	ANCESTRAL SPECIES	9	ENSGT00910000147036	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00910000146988	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795.a #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450 #35	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37	ENSGT00940000160628
Orangutan	MODERN SPECIES	7	ENSPPYG00000007209 #8	ENSPPYG00000036208	KDM8 (ENSPPYG00000007210) #9	NSMCE1 (ENSPPYG00000007212) #10	IL4R (ENSPPYG00000007213) #11	IL21R (ENSPPYG00000007214) #12	GTF3C1 (ENSPPYG00000007215) #13	KATNIP (ENSPPYG00000007216) #14	GSG1L (ENSPPYG00000007217) #15	XPO6 (ENSPPYG00000007218) #16	SBK1 (ENSPPYG00000033849) #18	LAT (ENSPPYG00000007220) #19	SPNS1 (ENSPPYG00000007221) #20	NFATC2IP (ENSPPYG00000007222) #21	CD19 (ENSPPYG00000007223) #24	RABEP2 (ENSPPYG00000007224) #22	ATP2A1 (ENSPPYG00000007225) #25	SH2B1 (ENSPPYG00000029848) #26	TUFM (ENSPPYG00000007226) #27	ATXN2L (ENSPPYG00000025917) #28	EIF3C (ENSPPYG00000007227) #29	CLN3 (ENSPPYG00000007229) #30	APOBR (ENSPPYG00000007230) #31	IL27 (ENSPPYG00000007231) #32	ENSPPYG00000007232 #33	SGF29 (ENSPPYG00000007233) #34	ENSPPYG00000039953	ENSPPYG00000030646 #35	ENSPPYG00000007237 #37	CORO1A (ENSPPYG00000007238)	MAPK3 (ENSPPYG00000007239)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00490000043964	ENSGT00940000154169.A	ENSGT00390000008969	ENSGT00390000016049	ENSGT00940000161103	ENSGT00940000158525	ENSGT00940000159632	ENSGT00940000159195	ENSGT00390000014957	ENSGT00390000002761	ENSGT00390000017626	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795.a #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450.g #35
Gorilla	MODERN SPECIES	7	MVP (ENSGGOG00000015603)	PAGR1 (ENSGGOG00000043142)	PRRT2 (ENSGGOG00000015599)	ENSGGOG00000042750	KIF22 (ENSGGOG00000015591)	ZG16 (ENSGGOG00000043832)	C16orf54 (ENSGGOG00000007535)	QPRT (ENSGGOG00000012175)	SPN (ENSGGOG00000004636)	ENSGGOG00000023604	ENSGGOG00000026051	LAT (ENSGGOG00000001966) #19	SPNS1 (ENSGGOG00000001963) #20	NFATC2IP (ENSGGOG00000001960) #21	CD19 (ENSGGOG00000016827) #24	RABEP2 (ENSGGOG00000008495) #22	ENSGGOG00000008480 #25	SH2B1 (ENSGGOG00000008472) #26	TUFM (ENSGGOG00000014136) #27	ATXN2L (ENSGGOG00000014112) #28	EIF3C (ENSGGOG00000026919) #29	ENSGGOG00000000809 #35	ENSGGOG00000000807 #34	NUPR1 (ENSGGOG00000000172) #33	IL27 (ENSGGOG00000027232) #32	APOBR (ENSGGOG00000001087) #31	CLN3 (ENSGGOG00000015016) #30	ENSGGOG00000022677 #29	SBK1 (ENSGGOG00000000573) #18	ENSGGOG00000022519	ENSGGOG00000040086
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000160492	ENSGT00940000154169.A	ENSGT00390000008969	ENSGT00390000016049	ENSGT00940000161103	ENSGT00940000158525	ENSGT00940000159632	ENSGT00940000159195	ENSGT00390000014957	ENSGT00390000002761	ENSGT00390000017626	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795.a #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000163450.g.a #35
Human	MODERN SPECIES	7	KIF22 (ENSG00000079616)	ZG16 (ENSG00000174992)	C16orf54 (ENSG00000185905)	QPRT (ENSG00000103485)	SPN (ENSG00000197471)	NPIPB12 (ENSG00000169203)	SULT1A4 (ENSG00000213648)	SLX1B (ENSG00000181625) #36	BOLA2 (ENSG00000183336) #37	BOLA2-SMG1P6 (ENSG00000261740)	NPIPB11 (ENSG00000254206)	LAT (ENSG00000213658) #19	SPNS1 (ENSG00000169682) #20	NFATC2IP (ENSG00000176953) #21	CD19 (ENSG00000177455) #24	RABEP2 (ENSG00000177548) #22	ATP2A1 (ENSG00000196296) #25	SH2B1 (ENSG00000178188) #26	TUFM (ENSG00000178952) #27	ATXN2L (ENSG00000168488) #28	NPIPB9 (ENSG00000196993)	EIF3C (ENSG00000184110) #29	NPIPB8 (ENSG00000255524)	SULT1A1 (ENSG00000196502) #35	SULT1A2 (ENSG00000197165) #35	SGF29 (ENSG00000176476) #34	NUPR1 (ENSG00000176046) #33	IL27 (ENSG00000197272) #32	APOBR (ENSG00000184730) #31	CLN3 (ENSG00000188603) #30	ENSG00000261832
Pan	ANCESTRAL SPECIES	10															ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795.a #28	ENSGT00910000146985	ENSGT00940000163450.g.a #35	ENSGT00390000015229 #34	ENSGT00530000064242.a #33	ENSGT00390000018206 #32	ENSGT00940000154852.a #18	ENSGT00390000002810.a #16	ENSGT01050000244814.a.a.a.a #15	ENSGT00910000146988	ENSGT00390000004566 #14	ENSGT00390000008664 #13
Bonobo	MODERN SPECIES	7	TMEM219 (ENSPPAG00000027480)	ENSPPAG00000025945	ASPHD1 (ENSPPAG00000035046)	SEZ6L2 (ENSPPAG00000032004)	CDIPT (ENSPPAG00000040218)	MVP (ENSPPAG00000036492)	PAGR1 (ENSPPAG00000029230)	PRRT2 (ENSPPAG00000041908)	ENSPPAG00000041571	KIF22 (ENSPPAG00000032354)	ZG16 (ENSPPAG00000031258)	C16orf54 (ENSPPAG00000007164)	QPRT (ENSPPAG00000038641)	SPN (ENSPPAG00000000724)	CD19 (ENSPPAG00000028921) #24	RABEP2 (ENSPPAG00000035259) #22	ATP2A1 (ENSPPAG00000036775) #25	SH2B1 (ENSPPAG00000035718) #26	TUFM (ENSPPAG00000035168) #27	ATXN2L (ENSPPAG00000039107) #28	ENSPPAG00000032570	ENSPPAG00000030300 #34	SULT1A2 (ENSPPAG00000034744) #35	SGF29 (ENSPPAG00000039380) #34	NUPR1 (ENSPPAG00000033055) #33	ENSPPAG00000033047 #32	ENSPPAG00000029983 #18	XPO6 (ENSPPAG00000033668) #16	ENSPPAG00000035481 #15	ENSPPAG00000039390	KATNIP (ENSPPAG00000036183) #14
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	7	KCTD13 (ENSPTRG00000007975)	ASPHD1 (ENSPTRG00000007974)	SEZ6L2 (ENSPTRG00000007973)	CDIPT (ENSPTRG00000007972)	MVP (ENSPTRG00000007971)	PAGR1 (ENSPTRG00000007970)	PRRT2 (ENSPTRG00000007969)	MAZ (ENSPTRG00000007968)	KIF22 (ENSPTRG00000007967)	ZG16 (ENSPTRG00000007966)	C16H16orf54 (ENSPTRG00000007965)	ENSPTRG00000052611	ENSPTRG00000031232	ENSPTRG00000044857 #22	CD19 (ENSPTRG00000007944) #24	RABEP2 (ENSPTRG00000007942) #22	ATP2A1 (ENSPTRG00000007941) #25	SH2B1 (ENSPTRG00000007940) #26	TUFM (ENSPTRG00000007939) #27	ATXN2L (ENSPTRG00000007938) #28	ENSPTRG00000044092	ENSPTRG00000051496 #35	SULT1A2 (ENSPTRG00000034249) #35	SGF29 (ENSPTRG00000007925) #34	NUPR1 (ENSPTRG00000007926) #33	IL27 (ENSPTRG00000007927) #32	LAT (ENSPTRG00000034140) #19	SPNS1 (ENSPTRG00000048927) #20	NFATC2IP (ENSPTRG00000007945) #21	CLN3 (ENSPTRG00000007930) #30	SBK1 (ENSPTRG00000046337) #18
Chimpanzee	MODERN SPECIES	7	NFATC2IP (ENSPTRG00000007945) #21	SPNS1 (ENSPTRG00000048927) #20	LAT (ENSPTRG00000034140) #19	IL27 (ENSPTRG00000007927) #32	NUPR1 (ENSPTRG00000007926) #33	SGF29 (ENSPTRG00000007925) #34	SULT1A2 (ENSPTRG00000034249) #35	ENSPTRG00000051496 #35	ENSPTRG00000044092	ATXN2L (ENSPTRG00000007938) #28	TUFM (ENSPTRG00000007939) #27	SH2B1 (ENSPTRG00000007940) #26	ATP2A1 (ENSPTRG00000007941) #25	RABEP2 (ENSPTRG00000007942) #22	CD19 (ENSPTRG00000007944) #24	ENSPTRG00000044857 #22	ENSPTRG00000031232	ENSPTRG00000052611	C16H16orf54 (ENSPTRG00000007965)	ZG16 (ENSPTRG00000007966)	KIF22 (ENSPTRG00000007967)	MAZ (ENSPTRG00000007968)	PRRT2 (ENSPTRG00000007969)	PAGR1 (ENSPTRG00000007970)	MVP (ENSPTRG00000007971)	CDIPT (ENSPTRG00000007972)	SEZ6L2 (ENSPTRG00000007973)	ASPHD1 (ENSPTRG00000007974)	KCTD13 (ENSPTRG00000007975)	TMEM219 (ENSPTRG00000007976)	TAOK2 (ENSPTRG00000007977)
Platyrrhini	ANCESTRAL SPECIES	35	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229.o #34	ENSGT00940000163450.a.a #35	ENSGT00940000164316.b	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Cebidae	ANCESTRAL SPECIES	16	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985	ENSGT00390000017900.o.a #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229.o #34	ENSGT00940000163450.a.a #35	ENSGT00940000164316.b	ENSGT00390000013368 #36	ENSGT00510000047760.y.a #37
Cebidae_a	ANCESTRAL SPECIES	15	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.a #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00910000146985
Capuchin	MODERN SPECIES	39	ENSCCAG00000011049	PARVA (ENSCCAG00000026534)	ENSCCAG00000024252	MICAL2 (ENSCCAG00000024846)	DKK3 (ENSCCAG00000023063)	USP47 (ENSCCAG00000036809)	GALNT18 (ENSCCAG00000034911)	KATNIP (ENSCCAG00000027874) #14	GSG1L (ENSCCAG00000031700) #15	XPO6 (ENSCCAG00000036360) #16	SBK1 (ENSCCAG00000030783) #18	LAT (ENSCCAG00000029693) #19	SPNS1 (ENSCCAG00000036198) #20	NFATC2IP (ENSCCAG00000023222) #21	CD19 (ENSCCAG00000003282) #24	RABEP2 (ENSCCAG00000031826) #22	ATP2A1 (ENSCCAG00000020602) #25	ENSCCAG00000003524	SH2B1 (ENSCCAG00000035021) #26	TUFM (ENSCCAG00000033296) #27	ATXN2L (ENSCCAG00000033928) #28	ENSCCAG00000023257
Bolivian squirrel monkey	MODERN SPECIES	78	ZKSCAN2 (ENSSBOG00000023587)	HS3ST4 (ENSSBOG00000035180)	KDM8 (ENSSBOG00000034671) #9	NSMCE1 (ENSSBOG00000021605) #10	IL4R (ENSSBOG00000026092) #11	IL21R (ENSSBOG00000033923) #12	GTF3C1 (ENSSBOG00000035679) #13	KATNIP (ENSSBOG00000019922) #14	GSG1L (ENSSBOG00000011445) #15	XPO6 (ENSSBOG00000027650) #16	SBK1 (ENSSBOG00000030861) #18	LAT (ENSSBOG00000009888) #19	SPNS1 (ENSSBOG00000035651) #20	ENSSBOG00000023378 #21	CD19 (ENSSBOG00000011323) #24	RABEP2 (ENSSBOG00000019278) #22	ATP2A1 (ENSSBOG00000034111) #25	SH2B1 (ENSSBOG00000034294) #26	TUFM (ENSSBOG00000026542) #27	ATXN2L (ENSSBOG00000025782) #28	ENSSBOG00000030815
Marmoset	MODERN SPECIES	3	C16orf82 (ENSCJAG00000022334) #8	KDM8 (ENSCJAG00000020509) #9	NSMCE1 (ENSCJAG00000020515) #10	IL4R (ENSCJAG00000005921) #11	IL21R (ENSCJAG00000031444) #12	GTF3C1 (ENSCJAG00000005950) #13	KATNIP (ENSCJAG00000005965) #14	GSG1L (ENSCJAG00000044404) #15	XPO6 (ENSCJAG00000006014) #16	SBK1 (ENSCJAG00000055391) #18	ENSCJAG00000042659	LAT (ENSCJAG00000033767) #19	SPNS1 (ENSCJAG00000006100) #20	NFATC2IP (ENSCJAG00000006133) #21	CD19 (ENSCJAG00000006147) #24	RABEP2 (ENSCJAG00000006169) #22	ATP2A1 (ENSCJAG00000006205) #25	SH2B1 (ENSCJAG00000006210) #26	TUFM (ENSCJAG00000006236) #27	ATXN2L (ENSCJAG00000006251) #28	ENSCJAG00000042871	ENSCJAG00000006341 #29	CLN3 (ENSCJAG00000006469) #30	APOBR (ENSCJAG00000006559) #31	IL27 (ENSCJAG00000006568) #32	NUPR1 (ENSCJAG00000070998) #33	SGF29 (ENSCJAG00000006577) #34	ENSCJAG00000087047 #35	ENSCJAG00000036404	ENSCJAG00000072749 #36	ENSCJAG00000046520 #37
Mas night monkey	MODERN SPECIES	624	HS3ST4 (ENSANAG00000030250)	KDM8 (ENSANAG00000023269) #9	NSMCE1 (ENSANAG00000030899) #10	IL4R (ENSANAG00000003183) #11	IL21R (ENSANAG00000032742) #12	GTF3C1 (ENSANAG00000037090) #13	KATNIP (ENSANAG00000033504) #14	GSG1L (ENSANAG00000029256) #15	XPO6 (ENSANAG00000031761) #16	SBK1 (ENSANAG00000024806) #18	LAT (ENSANAG00000022885) #19	SPNS1 (ENSANAG00000030997) #20	NFATC2IP (ENSANAG00000031935) #21	ENSANAG00000027734	CD19 (ENSANAG00000035227) #24	RABEP2 (ENSANAG00000035928) #22	ATP2A1 (ENSANAG00000037955) #25	SH2B1 (ENSANAG00000034202) #26	TUFM (ENSANAG00000022206) #27	ATXN2L (ENSANAG00000026257) #28	ENSANAG00000002300	ENSANAG00000024051	ENSANAG00000020640 #29	CLN3 (ENSANAG00000032278) #30	ENSANAG00000036908	APOBR (ENSANAG00000037115) #31	IL27 (ENSANAG00000034309) #32	NUPR1 (ENSANAG00000036925) #33	ENSANAG00000037641 #34	ENSANAG00000038226 #35	ENSANAG00000022231 #35
Tarsier	MODERN SPECIES	2474												LAT (ENSTSYG00000026423) #19	SPNS1 (ENSTSYG00000028920) #20	NFATC2IP (ENSTSYG00000025952) #21	CD19 (ENSTSYG00000002633) #24	RABEP2 (ENSTSYG00000037488) #22	ATP2A1 (ENSTSYG00000010765) #25	SH2B1 (ENSTSYG00000011154) #26	TUFM (ENSTSYG00000026053) #27	ATXN2L (ENSTSYG00000013854) #28	ENSTSYG00000003486 #29	CLN3 (ENSTSYG00000005360) #30	APOBR (ENSTSYG00000005421) #31	IL27 (ENSTSYG00000031835) #32	NUPR1 (ENSTSYG00000008007) #33
Strepsirrhini	ANCESTRAL SPECIES	14	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830	ENSGT00390000015750	ENSGT00940000155698.A	ENSGT00390000016895	ENSGT00940000161956
Mouse lemur	MODERN SPECIES	8	ZKSCAN2 (ENSMICG00000038553)	HS3ST4 (ENSMICG00000001588)	KDM8 (ENSMICG00000009534) #9	NSMCE1 (ENSMICG00000009548) #10	IL4R (ENSMICG00000035473) #11	IL21R (ENSMICG00000028006) #12	GTF3C1 (ENSMICG00000013376) #13	KATNIP (ENSMICG00000042641) #14	GSG1L (ENSMICG00000032492) #15	XPO6 (ENSMICG00000001923) #16	SBK1 (ENSMICG00000044977) #18	LAT (ENSMICG00000043017) #19	SPNS1 (ENSMICG00000000677) #20	NFATC2IP (ENSMICG00000000674) #21	CD19 (ENSMICG00000045114) #24	RABEP2 (ENSMICG00000000661) #22	ATP2A1 (ENSMICG00000000650) #25	SH2B1 (ENSMICG00000011488) #26	TUFM (ENSMICG00000007650) #27	ATXN2L (ENSMICG00000010608) #28	ENSMICG00000036748 #29	FAM20C (ENSMICG00000029992)	FOXL3 (ENSMICG00000047197)	PDGFA (ENSMICG00000036157)	PRKAR1B (ENSMICG00000015712)	DNAAF5 (ENSMICG00000044352)	SUN1 (ENSMICG00000033436)	GET4 (ENSMICG00000026606)	ADAP1 (ENSMICG00000015739)	COX19 (ENSMICG00000044718)	CYP2W1 (ENSMICG00000002095)
Lemuriformes_a	ANCESTRAL SPECIES	16	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830	ENSGT00390000015750	ENSGT00940000155698.A	ENSGT00390000016895	ENSGT00940000161956
Greater bamboo lemur	MODERN SPECIES	49											SBK1 (ENSPSMG00000022629) #18	LAT (ENSPSMG00000022626) #19	SPNS1 (ENSPSMG00000022614) #20	NFATC2IP (ENSPSMG00000022553) #21	CD19 (ENSPSMG00000022527) #24	RABEP2 (ENSPSMG00000022499) #22	ATP2A1 (ENSPSMG00000022385) #25	SH2B1 (ENSPSMG00000022250) #26	TUFM (ENSPSMG00000022174) #27	ATXN2L (ENSPSMG00000021941) #28	ENSPSMG00000021619 #29	FAM20C (ENSPSMG00000021554)	FOXL3 (ENSPSMG00000021539)	PDGFA (ENSPSMG00000021530)	PRKAR1B (ENSPSMG00000021502)	DNAAF5 (ENSPSMG00000021463)	SUN1 (ENSPSMG00000021432)	GET4 (ENSPSMG00000021323)	ADAP1 (ENSPSMG00000021283)	COX19 (ENSPSMG00000021218)	CYP2W1 (ENSPSMG00000021212)
Coquerels sifaka	MODERN SPECIES	155										XPO6 (ENSPCOG00000017886) #16	SBK1 (ENSPCOG00000015085) #18	LAT (ENSPCOG00000019068) #19	SPNS1 (ENSPCOG00000019687) #20	NFATC2IP (ENSPCOG00000008224) #21	CD19 (ENSPCOG00000019430) #24	RABEP2 (ENSPCOG00000019549) #22	ATP2A1 (ENSPCOG00000010240) #25	SH2B1 (ENSPCOG00000006851) #26	TUFM (ENSPCOG00000012267) #27	ATXN2L (ENSPCOG00000024791) #28	ENSPCOG00000019289 #29	FAM20C (ENSPCOG00000020588)	FOXL3 (ENSPCOG00000025610)	PDGFA (ENSPCOG00000024605)	PRKAR1B (ENSPCOG00000022089)	DNAAF5 (ENSPCOG00000017717)	SUN1 (ENSPCOG00000024118)	GET4 (ENSPCOG00000010435)	ADAP1 (ENSPCOG00000024598)	COX19 (ENSPCOG00000018186)	CYP2W1 (ENSPCOG00000022039)
Bushbaby	MODERN SPECIES	211	ENSOGAG00000009284	ZKSCAN2 (ENSOGAG00000009286)	KDM8 (ENSOGAG00000011854) #9	NSMCE1 (ENSOGAG00000004831) #10	IL4R (ENSOGAG00000024760) #11	IL21R (ENSOGAG00000003848) #12	GTF3C1 (ENSOGAG00000000875) #13	KATNIP (ENSOGAG00000015915) #14	GSG1L (ENSOGAG00000015923) #15	XPO6 (ENSOGAG00000012844) #16	SBK1 (ENSOGAG00000025836) #18	LAT (ENSOGAG00000032303) #19	SPNS1 (ENSOGAG00000013797) #20	NFATC2IP (ENSOGAG00000006885) #21	CD19 (ENSOGAG00000033375) #24	RABEP2 (ENSOGAG00000006881) #22	ATP2A1 (ENSOGAG00000006878) #25	SH2B1 (ENSOGAG00000028653) #26	TUFM (ENSOGAG00000006875) #27	ATXN2L (ENSOGAG00000012596) #28	ENSOGAG00000012737 #29	CLN3 (ENSOGAG00000001120) #30	APOBR (ENSOGAG00000027283) #31	IL27 (ENSOGAG00000001121) #32	NUPR1 (ENSOGAG00000001122) #33	ENSOGAG00000015794 #34	ENSOGAG00000015796	ENSOGAG00000033666 #36	CORO1A (ENSOGAG00000002942)	MAPK3 (ENSOGAG00000027841)	GDPD3 (ENSOGAG00000011663)
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Tree shrew	MODERN SPECIES	3576													SPNS1 (ENSTBEG00000016017) #20	NFATC2IP (ENSTBEG00000015914) #21	CD19 (ENSTBEG00000015694) #24	RABEP2 (ENSTBEG00000015354) #22	SH2B1 (ENSTBEG00000015182) #26	TUFM (ENSTBEG00000015029) #27	ENSTBEG00000014435 #28
Glires	ANCESTRAL SPECIES	11	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Lagomorpha	ANCESTRAL SPECIES	92											ENSGT00390000002810 #16	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Pika	MODERN SPECIES	4306																ENSOPRG00000004117 #22	ENSOPRG00000004056 #25
Rabbit	MODERN SPECIES	17	ENSOCUG00000015762	DTX2 (ENSOCUG00000000565)	UPK3B (ENSOCUG00000012402)	ENSOCUG00000032548	ENSOCUG00000034386	ENSOCUG00000026155	AUTS2 (ENSOCUG00000008775)	GALNT17 (ENSOCUG00000007108)	CALN1 (ENSOCUG00000000973)	ENSOCUG00000035113	ENSOCUG00000002727 #16	LAT (ENSOCUG00000025590) #19	SPNS1 (ENSOCUG00000022226) #20	NFATC2IP (ENSOCUG00000002695) #21	CD19 (ENSOCUG00000026150) #24	RABEP2 (ENSOCUG00000024487) #22	ATP2A1 (ENSOCUG00000002688) #25	ENSOCUG00000026940 #26	TUFM (ENSOCUG00000002683) #27	ATXN2L (ENSOCUG00000002677) #28	ENSOCUG00000022489 #29	CLN3 (ENSOCUG00000013067) #30	ENSOCUG00000013076 #31	ENSOCUG00000013092 #32	NUPR1 (ENSOCUG00000025022) #33	ENSOCUG00000025361 #34	ENSOCUG00000001536	ENSOCUG00000023157 #36	ENSOCUG00000007562 #37	CORO1A (ENSOCUG00000002253)	MAPK3 (ENSOCUG00000013716)
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Rodentia_B	ANCESTRAL SPECIES	15	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Myomorpha	ANCESTRAL SPECIES	17	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Muroidea	ANCESTRAL SPECIES	33	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Muroidea_A	ANCESTRAL SPECIES		ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001009250	Hs3st4 (ENSCGRG00001016433)	Kdm8 (ENSCGRG00001017571) #9	Nsmce1 (ENSCGRG00001018753) #10	Il4ra (ENSCGRG00001009994) #11	Il21r (ENSCGRG00001014015) #12	Gtf3c1 (ENSCGRG00001003866) #13	Katnip (ENSCGRG00001018820) #14	Gsg1l (ENSCGRG00001019110) #15	Xpo6 (ENSCGRG00001013173) #16	Sbk1 (ENSCGRG00001022461) #18	Lat (ENSCGRG00001018116) #19	Spns1 (ENSCGRG00001020734) #20	Nfatc2ip (ENSCGRG00001023795) #21	Cd19 (ENSCGRG00001001638) #24	Rabep2 (ENSCGRG00001019856) #22	Atp2a1 (ENSCGRG00001022932) #25	Sh2b1 (ENSCGRG00001011208) #26	Tufm (ENSCGRG00001022949) #27	Atxn2l (ENSCGRG00001017114) #28	EIF3C (ENSCGRG00001015265) #29	Cln3 (ENSCGRG00001016743) #30	ENSCGRG00001008061 #31	Il27 (ENSCGRG00001010064) #32	Nupr1 (ENSCGRG00001014979) #33	ENSCGRG00001016730 #34	Sult1a1 (ENSCGRG00001018863)	SLX1 (ENSCGRG00001000182) #36	Bola2 (ENSCGRG00001021746) #37	Coro1a (ENSCGRG00001024348)	Mapk3 (ENSCGRG00001014672)
Golden Hamster	MODERN SPECIES	617	Aqp8 (ENSMAUG00000011815)	Zkscan2 (ENSMAUG00000012038)	Hs3st4 (ENSMAUG00000011640)	Kdm8 (ENSMAUG00000011409) #9	Nsmce1 (ENSMAUG00000011302) #10	ENSMAUG00000011918	Il21r (ENSMAUG00000014018) #12	ENSMAUG00000011929 #13	Katnip (ENSMAUG00000013784) #14	Gsg1l (ENSMAUG00000014180) #15	Xpo6 (ENSMAUG00000012539) #16	Sbk1 (ENSMAUG00000011437) #18	Lat (ENSMAUG00000011996) #19	Spns1 (ENSMAUG00000011692) #20	Nfatc2ip (ENSMAUG00000013997) #21	Rabep2 (ENSMAUG00000010747) #22	Atp2a1 (ENSMAUG00000011566) #25	Sh2b1 (ENSMAUG00000011378) #26	Tufm (ENSMAUG00000010490) #27	Atxn2l (ENSMAUG00000011753) #28	Eif3c (ENSMAUG00000010621) #29	Cln3 (ENSMAUG00000012447) #30	Nupr1 (ENSMAUG00000012387) #33	Sgf29 (ENSMAUG00000011063) #34	Sult1a1 (ENSMAUG00000011339)	Slx1b (ENSMAUG00000010688) #36	Bola2 (ENSMAUG00000009901) #37	Coro1a (ENSMAUG00000013014)	Mapk3 (ENSMAUG00000012073)	Gdpd3 (ENSMAUG00000010571)	Ypel3 (ENSMAUG00000011044)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000027134	Hs3st4 (ENSPEMG00000006080)	Kdm8 (ENSPEMG00000013571) #9	Nsmce1 (ENSPEMG00000016630) #10	Il4ra (ENSPEMG00000012577) #11	Il21r (ENSPEMG00000017172) #12	Gtf3c1 (ENSPEMG00000030937) #13	Katnip (ENSPEMG00000011544) #14	Gsg1l (ENSPEMG00000005570) #15	Xpo6 (ENSPEMG00000012100) #16	Sbk1 (ENSPEMG00000025854) #18	Lat (ENSPEMG00000009303) #19	Spns1 (ENSPEMG00000011076) #20	Nfatc2ip (ENSPEMG00000017350) #21	Cd19 (ENSPEMG00000007326) #24	Rabep2 (ENSPEMG00000028456) #22	Atp2a1 (ENSPEMG00000010121) #25	Sh2b1 (ENSPEMG00000018285) #26	Tufm (ENSPEMG00000012208) #27	Atxn2l (ENSPEMG00000019231) #28	ENSPEMG00000027251	Eif3c (ENSPEMG00000010899) #29	Cln3 (ENSPEMG00000019015) #30	Apobr (ENSPEMG00000010718) #31	Il27 (ENSPEMG00000007065) #32	Nupr1 (ENSPEMG00000026508) #33	ENSPEMG00000013756	Slx1b (ENSPEMG00000010496) #36	ENSPEMG00000028163 #37	Coro1a (ENSPEMG00000015899)	Mapk3 (ENSPEMG00000001609)
Prairie vole	MODERN SPECIES	16	Hs3st4 (ENSMOCG00000007057)	ENSMOCG00000016487	Kdm8 (ENSMOCG00000017461) #9	Nsmce1 (ENSMOCG00000021441) #10	ENSMOCG00000016479 #11	Il21r (ENSMOCG00000014413) #12	ENSMOCG00000015797 #13	Katnip (ENSMOCG00000017061) #14	Gsg1l (ENSMOCG00000000845) #15	Xpo6 (ENSMOCG00000008015) #16	Sbk1 (ENSMOCG00000006414) #18	ENSMOCG00000007141 #19	Spns1 (ENSMOCG00000001851) #20	Nfatc2ip (ENSMOCG00000013210) #21	Cd19 (ENSMOCG00000009979) #24	ENSMOCG00000019459 #22	Atp2a1 (ENSMOCG00000000905) #25	Sh2b1 (ENSMOCG00000017773) #26	Tufm (ENSMOCG00000010051) #27	Atxn2l (ENSMOCG00000020882) #28	Eif3c (ENSMOCG00000004204) #29	Cln3 (ENSMOCG00000010322) #30	ENSMOCG00000017593 #31	Il27 (ENSMOCG00000005822) #32	Nupr1 (ENSMOCG00000013505) #33	Sgf29 (ENSMOCG00000021358) #34	Sult1a1 (ENSMOCG00000005225)	Slx1b (ENSMOCG00000019374) #36	Bola2 (ENSMOCG00000020792) #37	Coro1a (ENSMOCG00000011536)	Mapk3 (ENSMOCG00000017980)
Murinae	ANCESTRAL SPECIES		ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Mus	ANCESTRAL SPECIES		ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Mus_A	ANCESTRAL SPECIES	1	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Mus_B	ANCESTRAL SPECIES		ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
spretus	MODERN SPECIES	16	Zkscan2 (MGP_SPRETEiJ_G0031544)	Hs3st4 (MGP_SPRETEiJ_G0031545)	Kdm8 (MGP_SPRETEiJ_G0031546) #9	Nsmce1 (MGP_SPRETEiJ_G0031547) #10	Il4ra (MGP_SPRETEiJ_G0031548) #11	Gtf3c1 (MGP_SPRETEiJ_G0031549) #13	Il21r (MGP_SPRETEiJ_G0031550) #12	Katnip (MGP_SPRETEiJ_G0031551) #14	Gsg1l (MGP_SPRETEiJ_G0031552) #15	Xpo6 (MGP_SPRETEiJ_G0031553) #16	Sbk1 (MGP_SPRETEiJ_G0031554) #18	Lat (MGP_SPRETEiJ_G0031555) #19	Spns1 (MGP_SPRETEiJ_G0031556) #20	Nfatc2ip (MGP_SPRETEiJ_G0031557) #21	Cd19 (MGP_SPRETEiJ_G0031558) #24	Rabep2 (MGP_SPRETEiJ_G0031559) #22	Atp2a1 (MGP_SPRETEiJ_G0031560) #25	Sh2b1 (MGP_SPRETEiJ_G0031561) #26	MGP_SPRETEiJ_G0031562 #27	MGP_SPRETEiJ_G0031563 #27	Atxn2l (MGP_SPRETEiJ_G0031564) #28	Eif3c (MGP_SPRETEiJ_G0031565) #29	Cln3 (MGP_SPRETEiJ_G0031566) #30	Apobr (MGP_SPRETEiJ_G0031567) #31	Il27 (MGP_SPRETEiJ_G0031568) #32	Nupr1 (MGP_SPRETEiJ_G0031569) #33	Sgf29 (MGP_SPRETEiJ_G0031570) #34	MGP_SPRETEiJ_G0031571	Slx1b (MGP_SPRETEiJ_G0031572) #36	MGP_SPRETEiJ_G0031573	Coro1a (MGP_SPRETEiJ_G0031574)
Steppe mouse	MODERN SPECIES	3055	ENSMSIG00000018060	Kdm8 (ENSMSIG00000018033) #9	Nsmce1 (ENSMSIG00000017987) #10	Il4ra (ENSMSIG00000017970) #11	Il21r (ENSMSIG00000017912) #12	Gtf3c1 (ENSMSIG00000017703) #13	Katnip (ENSMSIG00000017392) #14	Gsg1l (ENSMSIG00000017378) #15	Xpo6 (ENSMSIG00000017169) #16	Sbk1 (ENSMSIG00000017148) #18	Lat (ENSMSIG00000017049) #19	Spns1 (ENSMSIG00000016894) #20	ENSMSIG00000016886	Nfatc2ip (ENSMSIG00000016853) #21	Cd19 (ENSMSIG00000016763) #24	Rabep2 (ENSMSIG00000016707) #22	Atp2a1 (ENSMSIG00000016661) #25	Sh2b1 (ENSMSIG00000016615) #26	Tufm (ENSMSIG00000016572) #27	Atxn2l (ENSMSIG00000016024) #28	Eif3c (ENSMSIG00000015977) #29	Cln3 (ENSMSIG00000015849) #30	Apobr (ENSMSIG00000015826) #31	Il27 (ENSMSIG00000015814) #32	Nupr1 (ENSMSIG00000015802) #33	Sgf29 (ENSMSIG00000015782) #34	Sult1a1 (ENSMSIG00000015694)	ENSMSIG00000015684	Slx1b (ENSMSIG00000015658) #36	Bola2 (ENSMSIG00000015634) #37	Coro1a (ENSMSIG00000015597)
Mouse	MODERN SPECIES	16	Zkscan2 (ENSMUSG00000030757)	Hs3st4 (ENSMUSG00000078591)	Kdm8 (ENSMUSG00000030752) #9	Nsmce1 (ENSMUSG00000030750) #10	Il4ra (ENSMUSG00000030748) #11	Il21r (ENSMUSG00000030745) #12	Gtf3c1 (ENSMUSG00000032777) #13	Katnip (ENSMUSG00000032743) #14	Gsg1l (ENSMUSG00000046182) #15	Xpo6 (ENSMUSG00000000131) #16	Sbk1 (ENSMUSG00000042978) #18	Lat (ENSMUSG00000030742) #19	Spns1 (ENSMUSG00000030741) #20	Nfatc2ip (ENSMUSG00000030722) #21	Cd19 (ENSMUSG00000030724) #24	Rabep2 (ENSMUSG00000030727) #22	Atp2a1 (ENSMUSG00000030730) #25	Sh2b1 (ENSMUSG00000030733) #26	Tufm (ENSMUSG00000073838) #27	Atxn2l (ENSMUSG00000032637) #28	Eif3c (ENSMUSG00000030738) #29	Cln3 (ENSMUSG00000030720) #30	Apobr (ENSMUSG00000042759) #31	Il27 (ENSMUSG00000044701) #32	Nupr1 (ENSMUSG00000030717) #33	Sgf29 (ENSMUSG00000030714) #34	Sult1a1 (ENSMUSG00000030711)	Slx1b (ENSMUSG00000059772) #36	Bola2 (ENSMUSG00000047721) #37	Coro1a (ENSMUSG00000030707)	Mapk3 (ENSMUSG00000063065)
Ryukyu mouse	MODERN SPECIES	16	Zkscan2 (MGP_CAROLIEiJ_G0030430)	Hs3st4 (MGP_CAROLIEiJ_G0030431)	Kdm8 (MGP_CAROLIEiJ_G0030432) #9	MGP_CAROLIEiJ_G0030433 #10	Il4ra (MGP_CAROLIEiJ_G0030434) #11	Il21r (MGP_CAROLIEiJ_G0030435) #12	Gtf3c1 (MGP_CAROLIEiJ_G0030436) #13	Katnip (MGP_CAROLIEiJ_G0030437) #14	Gsg1l (MGP_CAROLIEiJ_G0030438) #15	Xpo6 (MGP_CAROLIEiJ_G0030439) #16	Sbk1 (MGP_CAROLIEiJ_G0030440) #18	Lat (MGP_CAROLIEiJ_G0030441) #19	Spns1 (MGP_CAROLIEiJ_G0030442) #20	Nfatc2ip (MGP_CAROLIEiJ_G0030443) #21	Cd19 (MGP_CAROLIEiJ_G0030444) #24	Rabep2 (MGP_CAROLIEiJ_G0030445) #22	Atp2a1 (MGP_CAROLIEiJ_G0030446) #25	Sh2b1 (MGP_CAROLIEiJ_G0030447) #26	MGP_CAROLIEiJ_G0030448 #27	MGP_CAROLIEiJ_G0030449 #27	Atxn2l (MGP_CAROLIEiJ_G0030450) #28	Eif3c (MGP_CAROLIEiJ_G0030451) #29	Cln3 (MGP_CAROLIEiJ_G0030452) #30	Apobr (MGP_CAROLIEiJ_G0030453) #31	Il27 (MGP_CAROLIEiJ_G0030454) #32	Nupr1 (MGP_CAROLIEiJ_G0030455) #33	Sgf29 (MGP_CAROLIEiJ_G0030456) #34	Sult1a1 (MGP_CAROLIEiJ_G0030457)	Slx1b (MGP_CAROLIEiJ_G0030458) #36	Bola2 (MGP_CAROLIEiJ_G0030459) #37	Coro1a (MGP_CAROLIEiJ_G0030460)
Shrew mouse	MODERN SPECIES		Zkscan2 (MGP_PahariEiJ_G0013640)	Hs3st4 (MGP_PahariEiJ_G0013641)	Kdm8 (MGP_PahariEiJ_G0013642) #9	MGP_PahariEiJ_G0013643 #10	Il4ra (MGP_PahariEiJ_G0013644) #11	Il21r (MGP_PahariEiJ_G0013645) #12	Gtf3c1 (MGP_PahariEiJ_G0013646) #13	Katnip (MGP_PahariEiJ_G0013647) #14	Gsg1l (MGP_PahariEiJ_G0013648) #15	Xpo6 (MGP_PahariEiJ_G0013649) #16	Sbk1 (MGP_PahariEiJ_G0013650) #18	Lat (MGP_PahariEiJ_G0013651) #19	Spns1 (MGP_PahariEiJ_G0013652) #20	Nfatc2ip (MGP_PahariEiJ_G0013653) #21	Cd19 (MGP_PahariEiJ_G0013654) #24	Rabep2 (MGP_PahariEiJ_G0013655) #22	Atp2a1 (MGP_PahariEiJ_G0013656) #25	Sh2b1 (MGP_PahariEiJ_G0013657) #26	MGP_PahariEiJ_G0013658 #27	MGP_PahariEiJ_G0013659 #27	Atxn2l (MGP_PahariEiJ_G0013660) #28	Eif3c (MGP_PahariEiJ_G0013661) #29	Cln3 (MGP_PahariEiJ_G0013662) #30	Apobr (MGP_PahariEiJ_G0013663) #31	Il27 (MGP_PahariEiJ_G0013664) #32	Nupr1 (MGP_PahariEiJ_G0013665) #33	Sgf29 (MGP_PahariEiJ_G0013666) #34	Sult1a1 (MGP_PahariEiJ_G0013667)	Slx1b (MGP_PahariEiJ_G0013668) #36	Bola2 (MGP_PahariEiJ_G0013669) #37	Coro1a (MGP_PahariEiJ_G0013670)
Rat	MODERN SPECIES		Kdm8 (ENSRNOG00000015180) #9	Nsmce1 (ENSRNOG00000015218) #10	Il4r (ENSRNOG00000015441) #11	Il21r (ENSRNOG00000015773) #12	Gtf3c1 (ENSRNOG00000016218) #13	Katnip (ENSRNOG00000016635) #14	Gsg1l (ENSRNOG00000065255) #15	Xpo6 (ENSRNOG00000016722) #16	ENSRNOG00000066090	Sbk1 (ENSRNOG00000067387) #18	Lat (ENSRNOG00000017429) #19	Spns1 (ENSRNOG00000017621) #20	Nfatc2ip (ENSRNOG00000057384) #21	LOC100361060 (ENSRNOG00000031947)	Cd19 (ENSRNOG00000018311) #24	Rabep2 (ENSRNOG00000018462) #22	Atp2a1 (ENSRNOG00000047124) #25	Sh2b1 (ENSRNOG00000049181) #26	Tufm (ENSRNOG00000018604) #27	Atxn2l (ENSRNOG00000018686) #28	Eif3c (ENSRNOG00000018761) #29	Cln3 (ENSRNOG00000019103) #30	Apobr (ENSRNOG00000017403) #31	Il27 (ENSRNOG00000019170) #32	Sgf29 (ENSRNOG00000019245) #34	Sult1a1 (ENSRNOG00000019342)	Slx1b (ENSRNOG00000019369) #36	Bola2 (ENSRNOG00000047988) #37	Coro1a (ENSRNOG00000019430)	ENSRNOG00000067742	Gdpd3 (ENSRNOG00000019685)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1849												Lat (ENSNGAG00000012134) #19	Spns1 (ENSNGAG00000019129) #20	Nfatc2ip (ENSNGAG00000011194) #21	Cd19 (ENSNGAG00000011557) #24	Rabep2 (ENSNGAG00000022324) #22	Atp2a1 (ENSNGAG00000021803) #25	Sh2b1 (ENSNGAG00000012818) #26	Tufm (ENSNGAG00000008610) #27	Atxn2l (ENSNGAG00000021446) #28	ENSNGAG00000007177 #29	Cln3 (ENSNGAG00000003127) #30	Apobr (ENSNGAG00000005895) #31	Il27 (ENSNGAG00000014030) #32	Nupr1 (ENSNGAG00000007124) #33	Sgf29 (ENSNGAG00000022634) #34	ENSNGAG00000011841	Slx1b (ENSNGAG00000021200) #36	Bola2 (ENSNGAG00000016816) #37	Coro1a (ENSNGAG00000006260)	Mapk3 (ENSNGAG00000002514)
Lesser Egyptian jerboa	MODERN SPECIES	185	Igsf6 (ENSJJAG00000003017)	ENSJJAG00000014229	Cdr2 (ENSJJAG00000010384)	Polr3e (ENSJJAG00000013855)	Eef2k (ENSJJAG00000018692)	Gm5737 (ENSJJAG00000016375)	Vwa3a (ENSJJAG00000020241)	ENSJJAG00000021841	Pdzd9 (ENSJJAG00000003748)	Uqcrc2 (ENSJJAG00000011142)	ENSJJAG00000019860	ENSJJAG00000020162 #19	Spns1 (ENSJJAG00000023550) #20	Nfatc2ip (ENSJJAG00000015857) #21	Cd19 (ENSJJAG00000019541) #24	Rabep2 (ENSJJAG00000011526) #22	Atp2a1 (ENSJJAG00000010613) #25	Sh2b1 (ENSJJAG00000016721) #26	Tufm (ENSJJAG00000011840) #27	Atxn2l (ENSJJAG00000005629) #28	Eif3c (ENSJJAG00000012722) #29	Cln3 (ENSJJAG00000018817) #30	ENSJJAG00000020781 #31	Il27 (ENSJJAG00000009902) #32	Nupr1 (ENSJJAG00000007187) #33	Sgf29 (ENSJJAG00000009013) #34	Sult1a1 (ENSJJAG00000018594)	ENSJJAG00000020714 #37	ENSJJAG00000002997 #37	Coro1a (ENSJJAG00000014951)	Mapk3 (ENSJJAG00000010908)
Kangaroo rat	MODERN SPECIES	333	Lcmt1 (ENSDORG00000002356)	Aqp8 (ENSDORG00000002046)	ENSDORG00000000287	ENSDORG00000028645	Kdm8 (ENSDORG00000010239) #9	Nsmce1 (ENSDORG00000010238) #10	ENSDORG00000025894 #13	Katnip (ENSDORG00000011925) #14	Gsg1l (ENSDORG00000026547) #15	Xpo6 (ENSDORG00000000919) #16	Sbk1 (ENSDORG00000026042) #18	Lat (ENSDORG00000015973) #19	Spns1 (ENSDORG00000015970) #20	ENSDORG00000024986 #21	Cd19 (ENSDORG00000011641) #24	Rabep2 (ENSDORG00000000449) #22	Atp2a1 (ENSDORG00000000447) #25	Sh2b1 (ENSDORG00000024189) #26	ENSDORG00000016474 #27	ENSDORG00000025529 #28	Eif3c (ENSDORG00000016471) #29	Cln3 (ENSDORG00000026124) #30	ENSDORG00000023730 #31	Il27 (ENSDORG00000028915) #32	Nupr1 (ENSDORG00000026674) #33	Sgf29 (ENSDORG00000007002) #34	Sult1a1 (ENSDORG00000007003)	ENSDORG00000024182 #37	Slx1b (ENSDORG00000024044) #36	ENSDORG00000026227 #37	Coro1a (ENSDORG00000007427)
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Hystricomorpha_b	ANCESTRAL SPECIES	43	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Long-tailed chinchilla	MODERN SPECIES	200	ZKSCAN2 (ENSCLAG00000014742)	ENSCLAG00000012572	KDM8 (ENSCLAG00000009740) #9	NSMCE1 (ENSCLAG00000013740) #10	IL4R (ENSCLAG00000011524) #11	IL21R (ENSCLAG00000012979) #12	GTF3C1 (ENSCLAG00000016047) #13	KATNIP (ENSCLAG00000011054) #14	GSG1L (ENSCLAG00000010733) #15	XPO6 (ENSCLAG00000012270) #16	SBK1 (ENSCLAG00000012990) #18	LAT (ENSCLAG00000011417) #19	SPNS1 (ENSCLAG00000016889) #20	ENSCLAG00000014295 #21	ENSCLAG00000010024 #24	RABEP2 (ENSCLAG00000010726) #22	ATP2A1 (ENSCLAG00000010609) #25	SH2B1 (ENSCLAG00000012619) #26	TUFM (ENSCLAG00000013969) #27	ATXN2L (ENSCLAG00000016117) #28	ENSCLAG00000011094 #29	CLN3 (ENSCLAG00000014497) #30	ENSCLAG00000012149 #31	IL27 (ENSCLAG00000013615) #32	NUPR1 (ENSCLAG00000009448) #33	ENSCLAG00000017745	SGF29 (ENSCLAG00000011510) #34	ENSCLAG00000010427	CORO1A (ENSCLAG00000010816)	ENSCLAG00000014934 #37	MAPK3 (ENSCLAG00000013110)
Degu	MODERN SPECIES	42	ENSODEG00000013243	ENSODEG00000012500 #9	NSMCE1 (ENSODEG00000012706) #10	ENSODEG00000013555 #11	ENSODEG00000020080	IL21R (ENSODEG00000013082) #12	ENSODEG00000012637 #13	KATNIP (ENSODEG00000012822) #14	GSG1L (ENSODEG00000013728) #15	XPO6 (ENSODEG00000012917) #16	SBK1 (ENSODEG00000013329) #18	LAT (ENSODEG00000013595) #19	SPNS1 (ENSODEG00000012862) #20	ENSODEG00000014108 #21	CD19 (ENSODEG00000015285) #24	RABEP2 (ENSODEG00000013438) #22	ATP2A1 (ENSODEG00000012908) #25	SH2B1 (ENSODEG00000013674) #26	ENSODEG00000013626 #27	ENSODEG00000014083 #28	ENSODEG00000013508 #29	CLN3 (ENSODEG00000014718) #30	ENSODEG00000015006 #31	IL27 (ENSODEG00000013758) #32	SGF29 (ENSODEG00000013702) #34	ENSODEG00000013542	ENSODEG00000014553	ENSODEG00000013171 #36	ENSODEG00000013387	ENSODEG00000013915	ENSODEG00000015136 #37
Guinea pig	MODERN SPECIES	4	HS3ST4 (ENSCPOG00000005840)	KDM8 (ENSCPOG00000002282) #9	NSMCE1 (ENSCPOG00000002283) #10	IL4R (ENSCPOG00000038281) #11	IL21R (ENSCPOG00000030632) #12	ENSCPOG00000037787 #13	KATNIP (ENSCPOG00000007663) #14	GSG1L (ENSCPOG00000010553) #15	XPO6 (ENSCPOG00000012824) #16	ENSCPOG00000038278	SBK1 (ENSCPOG00000031542) #18	LAT (ENSCPOG00000023304) #19	SPNS1 (ENSCPOG00000002005) #20	ENSCPOG00000025814 #21	CD19 (ENSCPOG00000001999) #24	RABEP2 (ENSCPOG00000001997) #22	ATP2A1 (ENSCPOG00000001991) #25	SH2B1 (ENSCPOG00000008333) #26	TUFM (ENSCPOG00000010534) #27	ATXN2L (ENSCPOG00000010521) #28	ENSCPOG00000007533 #29	CLN3 (ENSCPOG00000002455) #30	ENSCPOG00000002459 #31	IL27 (ENSCPOG00000002462) #32	NUPR1 (ENSCPOG00000035568) #33	SGF29 (ENSCPOG00000027037) #34	ENSCPOG00000003910	ENSCPOG00000025948 #36	CORO1A (ENSCPOG00000003905)	ENSCPOG00000032964 #37	MAPK3 (ENSCPOG00000003253)
Naked mole-rat female	MODERN SPECIES	15	KDM8 (ENSHGLG00000015770) #9	NSMCE1 (ENSHGLG00000006540) #10	ENSHGLG00000041088 #11	ENSHGLG00000040451	GTF3C1 (ENSHGLG00000011628) #13	KATNIP (ENSHGLG00000016183) #14	GSG1L (ENSHGLG00000049570) #15	ENSHGLG00000014594	ENSHGLG00000009679 #16	ENSHGLG00000036755 #18	ENSHGLG00000035175	ENSHGLG00000012819 #19	SPNS1 (ENSHGLG00000011375) #20	NFATC2IP (ENSHGLG00000014293) #21	CD19 (ENSHGLG00000010838) #24	RABEP2 (ENSHGLG00000014706) #22	ATP2A1 (ENSHGLG00000013268) #25	SH2B1 (ENSHGLG00000012826) #26	TUFM (ENSHGLG00000006613) #27	ATXN2L (ENSHGLG00000010957) #28	ENSHGLG00000011445 #29	ENSHGLG00000020642	CLN3 (ENSHGLG00000012878) #30	ENSHGLG00000013925 #31	IL27 (ENSHGLG00000016817) #32	NUPR1 (ENSHGLG00000014156) #33	ENSHGLG00000014468 #34	ENSHGLG00000017703	ENSHGLG00000017736	ENSHGLG00000014223	MAPK3 (ENSHGLG00000012077)
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765.h	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Eurasian red squirrel	MODERN SPECIES	9	C16orf82 (ENSSVLG00005025969) #8	KDM8 (ENSSVLG00005025970) #9	ENSSVLG00005025971 #10	ENSSVLG00005025972 #10	IL4R (ENSSVLG00005025973) #11	IL21R (ENSSVLG00005025974) #12	GTF3C1 (ENSSVLG00005017024) #13	KATNIP (ENSSVLG00005017094) #14	GSG1L (ENSSVLG00005017165) #15	XPO6 (ENSSVLG00005017490) #16	SBK1 (ENSSVLG00005017581) #18	LAT (ENSSVLG00005017704) #19	SPNS1 (ENSSVLG00005018233) #20	NFATC2IP (ENSSVLG00005018442) #21	CD19 (ENSSVLG00005018553) #24	RABEP2 (ENSSVLG00005018836) #22	ATP2A1 (ENSSVLG00005019084) #25	SH2B1 (ENSSVLG00005019465) #26	TUFM (ENSSVLG00005019664) #27	ATXN2L (ENSSVLG00005019754) #28	ENSSVLG00005019833	ENSSVLG00005019892 #29	CLN3 (ENSSVLG00005020193) #30	APOBR (ENSSVLG00005021488) #31	IL27 (ENSSVLG00005021532) #32	NUPR1 (ENSSVLG00005021602) #33	ENSSVLG00005021635 #34	ENSSVLG00005021772	ENSSVLG00005021842	ENSSVLG00005021879 #36	ENSSVLG00005021963 #37
Marmotini	ANCESTRAL SPECIES	3	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765.h	ENSGT00940000162765.g.a.b	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Alpin marmot	MODERN SPECIES	28	ZKSCAN2 (ENSMMMG00000023387)	ENSMMMG00000023392	ENSMMMG00000023394	ENSMMMG00000023397	KDM8 (ENSMMMG00000023400) #9	NSMCE1 (ENSMMMG00000023402) #10	IL4R (ENSMMMG00000023407) #11	ENSMMMG00000023529 #12	GTF3C1 (ENSMMMG00000023536) #13	ENSMMMG00000023559 #14	XPO6 (ENSMMMG00000023563) #16	LAT (ENSMMMG00000023578) #19	SPNS1 (ENSMMMG00000023588) #20	ENSMMMG00000023596 #21	CD19 (ENSMMMG00000023599) #24	RABEP2 (ENSMMMG00000023605) #22	ATP2A1 (ENSMMMG00000023612) #25	SH2B1 (ENSMMMG00000023615) #26	TUFM (ENSMMMG00000023617) #27	ATXN2L (ENSMMMG00000023618) #28	ENSMMMG00000023627 #29	CLN3 (ENSMMMG00000023629) #30	APOBR (ENSMMMG00000023633) #31	IL27 (ENSMMMG00000023634) #32	NUPR1 (ENSMMMG00000023635) #33	SGF29 (ENSMMMG00000023637) #34	ENSMMMG00000023639	ENSMMMG00000023642	ENSMMMG00000023645	ENSMMMG00000023719	ENSMMMG00000023720 #36
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765.h	ENSGT00940000162765.g.b	ENSGT00940000162765.g.a.b	ENSGT00390000013368 #36	ENSGT00510000047760 #37
Squirrel	MODERN SPECIES	101	ZKSCAN2 (ENSSTOG00000000417)	ENSSTOG00000033163	KDM8 (ENSSTOG00000023025) #9	NSMCE1 (ENSSTOG00000026576) #10	IL4R (ENSSTOG00000027914) #11	IL21R (ENSSTOG00000028825) #12	GTF3C1 (ENSSTOG00000014996) #13	KATNIP (ENSSTOG00000023787) #14	GSG1L (ENSSTOG00000028996) #15	XPO6 (ENSSTOG00000012161) #16	SBK1 (ENSSTOG00000027718) #18	LAT (ENSSTOG00000031992) #19	SPNS1 (ENSSTOG00000028677) #20	NFATC2IP (ENSSTOG00000022263) #21	CD19 (ENSSTOG00000026333) #24	RABEP2 (ENSSTOG00000024069) #22	ATP2A1 (ENSSTOG00000006806) #25	SH2B1 (ENSSTOG00000006790) #26	TUFM (ENSSTOG00000011837) #27	ATXN2L (ENSSTOG00000011807) #28	ENSSTOG00000021278 #29	CLN3 (ENSSTOG00000013047) #30	ENSSTOG00000029252 #31	IL27 (ENSSTOG00000023320) #32	NUPR1 (ENSSTOG00000004072) #33	SGF29 (ENSSTOG00000013258) #34	ENSSTOG00000020854	ENSSTOG00000025698	ENSSTOG00000027156	ENSSTOG00000026583	ENSSTOG00000027413 #36
Arctic ground squirrel	MODERN SPECIES	97	ENSUPAG00010011202	HS3ST4 (ENSUPAG00010011205)	KDM8 (ENSUPAG00010011213) #9	NSMCE1 (ENSUPAG00010011215) #10	IL4R (ENSUPAG00010011221) #11	ENSUPAG00010011236 #12	GTF3C1 (ENSUPAG00010011245) #13	KATNIP (ENSUPAG00010011327) #14	GSG1L (ENSUPAG00010011339) #15	XPO6 (ENSUPAG00010011352) #16	SBK1 (ENSUPAG00010011377) #18	LAT (ENSUPAG00010011382) #19	SPNS1 (ENSUPAG00010011420) #20	NFATC2IP (ENSUPAG00010011493) #21	CD19 (ENSUPAG00010011499) #24	RABEP2 (ENSUPAG00010011537) #22	ATP2A1 (ENSUPAG00010011578) #25	SH2B1 (ENSUPAG00010011618) #26	TUFM (ENSUPAG00010011655) #27	ATXN2L (ENSUPAG00010011688) #28	ENSUPAG00010011821 #29	CLN3 (ENSUPAG00010011843) #30	ENSUPAG00010011897 #31	IL27 (ENSUPAG00010011902) #32	NUPR1 (ENSUPAG00010011921) #33	SGF29 (ENSUPAG00010011936) #34	ENSUPAG00010011945	ENSUPAG00010012208
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000164316	ENSGT00390000013368 #36	ENSGT00940000175130
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063743.a #22
Hedgehog	MODERN SPECIES	7146																ENSEEUG00000010615 #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Suina	ANCESTRAL SPECIES	31	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Pig	MODERN SPECIES	11	C16orf82 (ENSSSCG00000043923) #8	KDM8 (ENSSSCG00000007818) #9	NSMCE1 (ENSSSCG00000036275) #10	IL4R (ENSSSCG00000007817) #11	IL21R (ENSSSCG00000007816) #12	GTF3C1 (ENSSSCG00000007815) #13	KATNIP (ENSSSCG00000007814) #14	ENSSSCG00000007813	GSG1L (ENSSSCG00000022785) #15	XPO6 (ENSSSCG00000007812) #16	SBK1 (ENSSSCG00000060929) #18	LAT (ENSSSCG00000057915) #19	SPNS1 (ENSSSCG00000007811) #20	NFATC2IP (ENSSSCG00000007808) #21	CD19 (ENSSSCG00000007807) #24	RABEP2 (ENSSSCG00000007806) #22	ATP2A1 (ENSSSCG00000007805) #25	SH2B1 (ENSSSCG00000007804) #26	TUFM (ENSSSCG00000007803) #27	ATXN2L (ENSSSCG00000021845) #28	ENSSSCG00000034927 #29	CLN3 (ENSSSCG00000036603) #30	ENSSSCG00000033623 #31	IL27 (ENSSSCG00000039300) #32	NUPR1 (ENSSSCG00000040162) #33	SGF29 (ENSSSCG00000022778) #34	SULT1A3 (ENSSSCG00000021557)	ENSSSCG00000035561 #36	ENSSSCG00000033744 #37	CORO1A (ENSSSCG00000038055)	MAPK3 (ENSSSCG00000040682)
Chacoan peccary	MODERN SPECIES	842	ENSCWAG00000014315	HS3ST4 (ENSCWAG00000014347)	KDM8 (ENSCWAG00000014383) #9	NSMCE1 (ENSCWAG00000014447) #10	IL4R (ENSCWAG00000014492) #11	IL21R (ENSCWAG00000014526) #12	GTF3C1 (ENSCWAG00000014621) #13	KATNIP (ENSCWAG00000014745) #14	GSG1L (ENSCWAG00000015003) #15	XPO6 (ENSCWAG00000015235) #16	SBK1 (ENSCWAG00000015318) #18	LAT (ENSCWAG00000015388) #19	SPNS1 (ENSCWAG00000015576) #20	NFATC2IP (ENSCWAG00000015842) #21	CD19 (ENSCWAG00000015940) #24	RABEP2 (ENSCWAG00000016151) #22	ATP2A1 (ENSCWAG00000016322) #25	SH2B1 (ENSCWAG00000016900) #26	TUFM (ENSCWAG00000017027) #27	ATXN2L (ENSCWAG00000017073) #28	ENSCWAG00000017207 #29	CLN3 (ENSCWAG00000017327) #30	APOBR (ENSCWAG00000017807) #31	IL27 (ENSCWAG00000017955) #32	NUPR1 (ENSCWAG00000017999) #33	SGF29 (ENSCWAG00000018029) #34	ENSCWAG00000018056	ENSCWAG00000018160 #36	ENSCWAG00000018260 #37	CORO1A (ENSCWAG00000018306)	MAPK3 (ENSCWAG00000018419)
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.i.a #37	ENSGT00940000160628
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.i.a #37	ENSGT00940000160628
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.e #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.i.a #37	ENSGT00940000160628
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.e #16	ENSGT00390000001319.ob	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.i.a #37	ENSGT00940000160628
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810.e #16	ENSGT00390000001319.ob	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.i.a #37	ENSGT00940000160628
Beluga whale	MODERN SPECIES	48	KDM8 (ENSDLEG00000011399) #9	NSMCE1 (ENSDLEG00000011431) #10	IL4R (ENSDLEG00000011463) #11	ENSDLEG00000011482	IL21R (ENSDLEG00000011488) #12	GTF3C1 (ENSDLEG00000011508) #13	KIAA0556 (ENSDLEG00000011590) #14	GSG1L (ENSDLEG00000011645) #15	XPO6 (ENSDLEG00000011668) #16	SBK1 (ENSDLEG00000011782) #18	ENSDLEG00000011792	LAT (ENSDLEG00000011800) #19	SPNS1 (ENSDLEG00000011836) #20	NFATC2IP (ENSDLEG00000011870) #21	CD19 (ENSDLEG00000011894) #24	RABEP2 (ENSDLEG00000011958) #22	ATP2A1 (ENSDLEG00000012109) #25	SH2B1 (ENSDLEG00000013846) #26	TUFM (ENSDLEG00000013889) #27	ATXN2L (ENSDLEG00000013939) #28	ENSDLEG00000014009	ENSDLEG00000014024 #29	CLN3 (ENSDLEG00000014099) #30	APOBR (ENSDLEG00000014148) #31	IL27 (ENSDLEG00000014160) #32	NUPR1 (ENSDLEG00000014172) #33	SGF29 (ENSDLEG00000014188) #34	ENSDLEG00000014205	SLX1A (ENSDLEG00000014243) #36	BOLA2B (ENSDLEG00000014257) #37	CORO1A (ENSDLEG00000014272)
Narwhal	MODERN SPECIES	299	HS3ST4 (ENSMMNG00015011467)	KDM8 (ENSMMNG00015011485) #9	NSMCE1 (ENSMMNG00015011498) #10	IL4R (ENSMMNG00015011525) #11	IL21R (ENSMMNG00015011559) #12	GTF3C1 (ENSMMNG00015011604) #13	KATNIP (ENSMMNG00015011757) #14	GSG1L (ENSMMNG00015011861) #15	ENSMMNG00015011901 #16	ENSMMNG00015011920	SBK1 (ENSMMNG00015011933) #18	LAT (ENSMMNG00015011948) #19	SPNS1 (ENSMMNG00015012002) #20	NFATC2IP (ENSMMNG00015012072) #21	CD19 (ENSMMNG00015012093) #24	RABEP2 (ENSMMNG00015012140) #22	ATP2A1 (ENSMMNG00015012213) #25	SH2B1 (ENSMMNG00015012261) #26	TUFM (ENSMMNG00015012296) #27	ATXN2L (ENSMMNG00015012471) #28	ENSMMNG00015012742	ENSMMNG00015012755 #29	CLN3 (ENSMMNG00015012832) #30	APOBR (ENSMMNG00015012951) #31	IL27 (ENSMMNG00015012959) #32	NUPR1 (ENSMMNG00015012970) #33	SGF29 (ENSMMNG00015012978) #34	ENSMMNG00015012995	ENSMMNG00015013016 #36	ENSMMNG00015013044 #37	CORO1A (ENSMMNG00015013059)
Vaquita	MODERN SPECIES	6	HS3ST4 (ENSPSNG00000006609)	KDM8 (ENSPSNG00000006644) #9	NSMCE1 (ENSPSNG00000006679) #10	IL4R (ENSPSNG00000006716) #11	IL21R (ENSPSNG00000006785) #12	GTF3C1 (ENSPSNG00000006844) #13	KATNIP (ENSPSNG00000006998) #14	GSG1L (ENSPSNG00000007197) #15	XPO6 (ENSPSNG00000007323) #16	SBK1 (ENSPSNG00000007382) #18	ENSPSNG00000007436	LAT (ENSPSNG00000007468) #19	SPNS1 (ENSPSNG00000007637) #20	NFATC2IP (ENSPSNG00000007827) #21	CD19 (ENSPSNG00000007947) #24	RABEP2 (ENSPSNG00000008167) #22	ATP2A1 (ENSPSNG00000008382) #25	SH2B1 (ENSPSNG00000008730) #26	TUFM (ENSPSNG00000008819) #27	ATXN2L (ENSPSNG00000008917) #28	ENSPSNG00000009060	ENSPSNG00000009094 #29	CLN3 (ENSPSNG00000009458) #30	APOBR (ENSPSNG00000009986) #31	IL27 (ENSPSNG00000010177) #32	NUPR1 (ENSPSNG00000010252) #33	SGF29 (ENSPSNG00000010305) #34	ENSPSNG00000010419	ENSPSNG00000010490 #37	ENSPSNG00000010574 #36	CORO1A (ENSPSNG00000010607)
Dolphin	MODERN SPECIES	2138												LAT (ENSTTRG00000007921) #19	SPNS1 (ENSTTRG00000007920) #20	NFATC2IP (ENSTTRG00000007918) #21	CD19 (ENSTTRG00000007917) #24	RABEP2 (ENSTTRG00000007916) #22	ATP2A1 (ENSTTRG00000007913) #25	SH2B1 (ENSTTRG00000007912) #26
Sperm whale	MODERN SPECIES	22											SBK1 (ENSPCTG00005021064) #18	LAT (ENSPCTG00005020963) #19	SPNS1 (ENSPCTG00005020743) #20	NFATC2IP (ENSPCTG00005020669) #21	CD19 (ENSPCTG00005020526) #24	RABEP2 (ENSPCTG00005020340) #22	ATP2A1 (ENSPCTG00005020266) #25	SH2B1 (ENSPCTG00005020140) #26	TUFM (ENSPCTG00005020101) #27	ENSPCTG00005020086	ATXN2L (ENSPCTG00005020024) #28	ENSPCTG00005019932 #29	CLN3 (ENSPCTG00005019570) #30	ENSPCTG00005019443 #31	IL27 (ENSPCTG00005019377) #32	NUPR1 (ENSPCTG00005019352) #33
Blue whale	MODERN SPECIES	6	C16orf82 (ENSBMSG00010011637) #8	KDM8 (ENSBMSG00010011648) #9	NSMCE1 (ENSBMSG00010011666) #10	IL4R (ENSBMSG00010011698) #11	IL21R (ENSBMSG00010011728) #12	GTF3C1 (ENSBMSG00010011754) #13	KATNIP (ENSBMSG00010011808) #14	GSG1L (ENSBMSG00010011845) #15	ENSBMSG00010011874	XPO6 (ENSBMSG00010011901) #16	SBK1 (ENSBMSG00010011975) #18	LAT (ENSBMSG00010011992) #19	SPNS1 (ENSBMSG00010012093) #20	NFATC2IP (ENSBMSG00010012143) #21	CD19 (ENSBMSG00010012189) #24	RABEP2 (ENSBMSG00010012309) #22	ENSBMSG00010012354	ATP2A1 (ENSBMSG00010012389) #25	SH2B1 (ENSBMSG00010012501) #26	TUFM (ENSBMSG00010012546) #27	ATXN2L (ENSBMSG00010012664) #28	ENSBMSG00010013118	ENSBMSG00010013132 #29	CLN3 (ENSBMSG00010013199) #30	ENSBMSG00010013388 #31	IL27 (ENSBMSG00010013411) #32	NUPR1 (ENSBMSG00010013433) #33	SGF29 (ENSBMSG00010013452) #34	ENSBMSG00010013475	ENSBMSG00010013498 #36	ENSBMSG00010013520 #37
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Bovinae	ANCESTRAL SPECIES	7	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00730000111608.b.a	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Bos	ANCESTRAL SPECIES	9	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00730000111608.b.a	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249.r #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Bos_a	ANCESTRAL SPECIES	13	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664.j #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00730000111608.b.a	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249.r #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Domestic yak	MODERN SPECIES	18	KDM8 (ENSBGRG00000018842) #9	NSMCE1 (ENSBGRG00000018739) #10	IL4R (ENSBGRG00000018652) #11	IL21R (ENSBGRG00000018543) #12	GTF3C1 (ENSBGRG00000017644) #13	KATNIP (ENSBGRG00000017166) #14	GSG1L (ENSBGRG00000016993) #15	XPO6 (ENSBGRG00000016650) #16	SBK1 (ENSBGRG00000016570) #18	ENSBGRG00000016545	ENSBGRG00000016511	LAT (ENSBGRG00000016191) #19	SPNS1 (ENSBGRG00000015771) #20	NFATC2IP (ENSBGRG00000015538) #21	CD19 (ENSBGRG00000015380) #24	RABEP2 (ENSBGRG00000014809) #22	ATP2A1 (ENSBGRG00000009846) #25	SH2B1 (ENSBGRG00000009328) #26	TUFM (ENSBGRG00000009208) #27	ATXN2L (ENSBGRG00000009138) #28	ENSBGRG00000009059 #29	CLN3 (ENSBGRG00000008453) #30	ENSBGRG00000008362	IL27 (ENSBGRG00000008273) #32	NUPR1 (ENSBGRG00000008229) #33	ENSBGRG00000008176 #34	ENSBGRG00000008080 #35	ENSBGRG00000007963 #36	ENSBGRG00000007891 #37	CORO1A (ENSBGRG00000007642)	MAPK3 (ENSBGRG00000007125)
Wild yak	MODERN SPECIES	657							ENSBMUG00000002950 #13	KATNIP (ENSBMUG00000002000) #14	GSG1L (ENSBMUG00000001959) #15	XPO6 (ENSBMUG00000001929) #16	ENSBMUG00000001839	LAT (ENSBMUG00000001824) #19	SPNS1 (ENSBMUG00000001786) #20	NFATC2IP (ENSBMUG00000001691) #21	CD19 (ENSBMUG00000001669) #24	RABEP2 (ENSBMUG00000001645) #22	ATP2A1 (ENSBMUG00000001573) #25	SH2B1 (ENSBMUG00000001425) #26	TUFM (ENSBMUG00000001376) #27	ATXN2L (ENSBMUG00000001117) #28	EIF3C (ENSBMUG00000000857) #29	CLN3 (ENSBMUG00000000700) #30	APOBR (ENSBMUG00000000265) #31	IL27 (ENSBMUG00000000176) #32	NUPR1 (ENSBMUG00000026337) #33	SGF29 (ENSBMUG00000026333) #34	ENSBMUG00000026329	ENSBMUG00000026324 #36	ENSBMUG00000026322 #37	CORO1A (ENSBMUG00000026319)	MAPK3 (ENSBMUG00000026317)
Bos_b	ANCESTRAL SPECIES	6	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00730000111608.b.a	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249.r #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Hybrid Bos Indicus	MODERN SPECIES	17	KDM8 (ENSBIXG00005021078) #9	NSMCE1 (ENSBIXG00005021143) #10	IL4R (ENSBIXG00005021224) #11	IL21R (ENSBIXG00005021246) #12	GTF3C1 (ENSBIXG00005021370) #13	KATNIP (ENSBIXG00005003633) #14	GSG1L (ENSBIXG00005021641) #15	XPO6 (ENSBIXG00005021726) #16	SBK1 (ENSBIXG00005007164) #18	ENSBIXG00005021768	ENSBIXG00005005449	LAT (ENSBIXG00005002612) #19	SPNS1 (ENSBIXG00005021915) #20	NFATC2IP (ENSBIXG00005003710) #21	CD19 (ENSBIXG00005003722) #24	RABEP2 (ENSBIXG00005022146) #22	ATP2A1 (ENSBIXG00005022225) #25	SH2B1 (ENSBIXG00005022427) #26	TUFM (ENSBIXG00005022472) #27	ATXN2L (ENSBIXG00005022631) #28	CLN3 (ENSBIXG00005023084) #30	APOBR (ENSBIXG00005023162) #31	IL27 (ENSBIXG00005023198) #32	NUPR1 (ENSBIXG00005023217) #33	SGF29 (ENSBIXG00005023241) #34	ENSBIXG00005023273	ENSBIXG00005023341 #36	ENSBIXG00005023363 #37	CORO1A (ENSBIXG00005023425)	MAPK3 (ENSBIXG00005023659)	GDPD3 (ENSBIXG00005004061)
Cow	MODERN SPECIES	17	KDM8 (ENSBTAG00000019530) #9	NSMCE1 (ENSBTAG00000002176) #10	IL4R (ENSBTAG00000001602) #11	IL21R (ENSBTAG00000019567) #12	GTF3C1 (ENSBTAG00000006126) #13	KATNIP (ENSBTAG00000006129) #14	GSG1L (ENSBTAG00000004607) #15	XPO6 (ENSBTAG00000010309) #16	SBK1 (ENSBTAG00000032140) #18	ENSBTAG00000051235	ENSBTAG00000032136	LAT (ENSBTAG00000021249) #19	SPNS1 (ENSBTAG00000014653) #20	NFATC2IP (ENSBTAG00000014650) #21	CD19 (ENSBTAG00000032122) #24	RABEP2 (ENSBTAG00000006542) #22	ATP2A1 (ENSBTAG00000006541) #25	SH2B1 (ENSBTAG00000019219) #26	TUFM (ENSBTAG00000019216) #27	ATXN2L (ENSBTAG00000032087) #28	EIF3CL (ENSBTAG00000006543) #29	CLN3 (ENSBTAG00000018000) #30	ENSBTAG00000050361 #31	IL27 (ENSBTAG00000018015) #32	NUPR1 (ENSBTAG00000018016) #33	SGF29 (ENSBTAG00000016883) #34	SULT1A1 (ENSBTAG00000008635)	SLX1A (ENSBTAG00000008633) #36	ENSBTAG00000008632 #37	CORO1A (ENSBTAG00000008631)	MAPK3 (ENSBTAG00000016156)
American bison	MODERN SPECIES	3004	KDM8 (ENSBBBG00000019314) #9	NSMCE1 (ENSBBBG00000008769) #10	IL4R (ENSBBBG00000009170) #11	IL21R (ENSBBBG00000019279) #12	GTF3C1 (ENSBBBG00000019273) #13	KATNIP (ENSBBBG00000004949) #14	GSG1L (ENSBBBG00000004894) #15	XPO6 (ENSBBBG00000019074) #16	SBK1 (ENSBBBG00000019036) #18	ENSBBBG00000019030	ENSBBBG00000019028	LAT (ENSBBBG00000004857) #19	SPNS1 (ENSBBBG00000004832) #20	NFATC2IP (ENSBBBG00000018909) #21	CD19 (ENSBBBG00000018898) #24	RABEP2 (ENSBBBG00000004764) #22	ATP2A1 (ENSBBBG00000004716) #25	SH2B1 (ENSBBBG00000018686) #26	TUFM (ENSBBBG00000018625) #27	ATXN2L (ENSBBBG00000018614) #28	ENSBBBG00000018515 #29	CLN3 (ENSBBBG00000018400) #30	ENSBBBG00000017816 #31	IL27 (ENSBBBG00000017809) #32	NUPR1 (ENSBBBG00000004387) #33	SGF29 (ENSBBBG00000017796) #34	ENSBBBG00000017783	ENSBBBG00000017755 #36	ENSBBBG00000017741 #37	CORO1A (ENSBBBG00000017727)	MAPK3 (ENSBBBG00000004374)
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000161884.c	ENSGT00950000183123.g.a.b.b.h.b	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748.r #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Goat	MODERN SPECIES	17	KDM8 (ENSCHIG00000016272) #9	NSMCE1 (ENSCHIG00000019879) #10	IL4R (ENSCHIG00000020331) #11	IL21R (ENSCHIG00000023851) #12	GTF3C1 (ENSCHIG00000012815) #13	KATNIP (ENSCHIG00000014045) #14	GSG1L (ENSCHIG00000017943) #15	XPO6 (ENSCHIG00000022341) #16	ENSCHIG00000010418	SBK1 (ENSCHIG00000007938) #18	ENSCHIG00000010844	LAT (ENSCHIG00000025007) #19	SPNS1 (ENSCHIG00000017567) #20	NFATC2IP (ENSCHIG00000018034) #21	CD19 (ENSCHIG00000023420) #24	RABEP2 (ENSCHIG00000023058) #22	ATP2A1 (ENSCHIG00000024152) #25	SH2B1 (ENSCHIG00000024260) #26	TUFM (ENSCHIG00000020583) #27	ATXN2L (ENSCHIG00000009907) #28	ENSCHIG00000024795 #29	CLN3 (ENSCHIG00000020622) #30	APOBR (ENSCHIG00000021439) #31	IL27 (ENSCHIG00000010751) #32	NUPR1 (ENSCHIG00000017378) #33	SGF29 (ENSCHIG00000015325) #34	ENSCHIG00000019289	ENSCHIG00000021042 #36	CORO1A (ENSCHIG00000021644)	ENSCHIG00000024393 #37	MAPK3 (ENSCHIG00000016099)
Rambouillet Sheep	MODERN SPECIES	16	AQP8 (ENSOARG00020025576)	ENSOARG00020025580	ENSOARG00020025585	HS3ST4 (ENSOARG00020025592)	ENSOARG00020025596 #11	IL21R (ENSOARG00020025605) #12	GTF3C1 (ENSOARG00020025654) #13	GSG1L (ENSOARG00020025869) #15	XPO6 (ENSOARG00020025881) #16	SBK1 (ENSOARG00020025897) #18	LAT (ENSOARG00020025902) #19	SPNS1 (ENSOARG00020025911) #20	ENSOARG00020025930 #21	ENSOARG00020025935	CD19 (ENSOARG00020025940) #24	RABEP2 (ENSOARG00020025948) #22	ATP2A1 (ENSOARG00020025958) #25	SH2B1 (ENSOARG00020025973) #26	TUFM (ENSOARG00020025991) #27	ATXN2L (ENSOARG00020026002) #28	ENSOARG00020026028	EIF3C (ENSOARG00020026031) #29	CLN3 (ENSOARG00020026043) #30	ENSOARG00020026072 #31	IL27 (ENSOARG00020026079) #32	NUPR1 (ENSOARG00020026084) #33	SGF29 (ENSOARG00020014549) #34	ENSOARG00020014591	ENSOARG00020014644 #36	ENSOARG00020014726 #37	CORO1A (ENSOARG00020014834)
Siberian musk deer	MODERN SPECIES	211	HS3ST4 (ENSMMSG00000007048)	ENSMMSG00000007066	KDM8 (ENSMMSG00000007084) #9	NSMCE1 (ENSMMSG00000007127) #10	IL4R (ENSMMSG00000007168) #11	IL21R (ENSMMSG00000007197) #12	GTF3C1 (ENSMMSG00000007249) #13	KATNIP (ENSMMSG00000007393) #14	GSG1L (ENSMMSG00000007611) #15	XPO6 (ENSMMSG00000007789) #16	SBK1 (ENSMMSG00000007855) #18	LAT (ENSMMSG00000007912) #19	SPNS1 (ENSMMSG00000007987) #20	NFATC2IP (ENSMMSG00000008219) #21	CD19 (ENSMMSG00000008286) #24	RABEP2 (ENSMMSG00000008416) #22	ATP2A1 (ENSMMSG00000008642) #25	SH2B1 (ENSMMSG00000008798) #26	ENSMMSG00000008950 #27	ATXN2L (ENSMMSG00000009007) #28	ENSMMSG00000009326 #29	CLN3 (ENSMMSG00000009468) #30	ENSMMSG00000009952 #31	IL27 (ENSMMSG00000009972) #32	NUPR1 (ENSMMSG00000009984) #33	SGF29 (ENSMMSG00000010009) #34	ENSMMSG00000010075	ENSMMSG00000010112 #37	ENSMMSG00000010161 #36	CORO1A (ENSMMSG00000010266)	ENSMMSG00000010315
Yarkand deer	MODERN SPECIES	1	ENSCHYG00000003186	KDM8 (ENSCHYG00000003199) #9	NSMCE1 (ENSCHYG00000003212) #10	ENSCHYG00000003233	IL4R (ENSCHYG00000003248) #11	IL21R (ENSCHYG00000003266) #12	GTF3C1 (ENSCHYG00000003332) #13	KATNIP (ENSCHYG00000003636) #14	GSG1L (ENSCHYG00000003754) #15	XPO6 (ENSCHYG00000003767) #16	SBK1 (ENSCHYG00000003796) #18	ENSCHYG00000003821 #19	SPNS1 (ENSCHYG00000003884) #20	NFATC2IP (ENSCHYG00000003964) #21	CD19 (ENSCHYG00000003996) #24	RABEP2 (ENSCHYG00000004049) #22	ATP2A1 (ENSCHYG00000004187) #25	SH2B1 (ENSCHYG00000004267) #26	TUFM (ENSCHYG00000004316) #27	ATXN2L (ENSCHYG00000004404) #28	ENSCHYG00000004575 #29	CLN3 (ENSCHYG00000004661) #30	APOBR (ENSCHYG00000004799) #31	IL27 (ENSCHYG00000004812) #32	ENSCHYG00000004819 #33	SGF29 (ENSCHYG00000004838) #34	ENSCHYG00000004858	ENSCHYG00000004878 #36	ENSCHYG00000004899 #37	CORO1A (ENSCHYG00000004912)	ENSCHYG00000004982
Camelidae	ANCESTRAL SPECIES	30	ENSGT00960000187477	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Arabian camel	MODERN SPECIES	9	ENSCDRG00005005326	ENSCDRG00005005355	ENSCDRG00005005364 #8	KDM8 (ENSCDRG00005005397) #9	NSMCE1 (ENSCDRG00005005436) #10	IL4R (ENSCDRG00005005480) #11	IL21R (ENSCDRG00005005522) #12	GTF3C1 (ENSCDRG00005005550) #13	KATNIP (ENSCDRG00005005659) #14	GSG1L (ENSCDRG00005005771) #15	XPO6 (ENSCDRG00005005792) #16	LAT (ENSCDRG00005005856) #19	SPNS1 (ENSCDRG00005005916) #20	NFATC2IP (ENSCDRG00005006178) #21	CD19 (ENSCDRG00005006249) #24	RABEP2 (ENSCDRG00005006302) #22	ATP2A1 (ENSCDRG00005006738) #25	SH2B1 (ENSCDRG00005007075) #26	TUFM (ENSCDRG00005007270) #27	ATXN2L (ENSCDRG00005007317) #28	EIF3C (ENSCDRG00005007680) #29	CLN3 (ENSCDRG00005007825) #30	APOBR (ENSCDRG00005008224) #31	IL27 (ENSCDRG00005008262) #32	NUPR1 (ENSCDRG00005008320) #33	SGF29 (ENSCDRG00005008342) #34	ENSCDRG00005008436	ENSCDRG00005008463 #36	ENSCDRG00005008583 #37	CORO1A (ENSCDRG00005008664)	MAPK3 (ENSCDRG00005008768)
Alpaca	MODERN SPECIES	2185															ENSVPAG00000006810 #21	ENSVPAG00000006809 #22
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760.l #37	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
Carnivora	ANCESTRAL SPECIES	12	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760.l #37	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
Felidae	ANCESTRAL SPECIES	19	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628	ENSGT00940000160691
Cat	MODERN SPECIES	247	ZKSCAN2 (ENSFCAG00000015272)	HS3ST4 (ENSFCAG00000022747)	CE3H16orf82 (ENSFCAG00000052983) #8	KDM8 (ENSFCAG00000000957) #9	NSMCE1 (ENSFCAG00000007733) #10	IL4R (ENSFCAG00000023022) #11	IL21R (ENSFCAG00000009924) #12	GTF3C1 (ENSFCAG00000009925) #13	KATNIP (ENSFCAG00000009928) #14	GSG1L (ENSFCAG00000024353) #15	XPO6 (ENSFCAG00000010309) #16	SBK1 (ENSFCAG00000041165) #18	LAT (ENSFCAG00000018238) #19	NFATC2IP (ENSFCAG00000004400) #21	CD19 (ENSFCAG00000003107) #24	RABEP2 (ENSFCAG00000003106) #22	ATP2A1 (ENSFCAG00000007746) #25	SH2B1 (ENSFCAG00000003104) #26	TUFM (ENSFCAG00000003103) #27	ATXN2L (ENSFCAG00000027807) #28	SPNS1 (ENSFCAG00000003108) #20	CLN3 (ENSFCAG00000012288) #30	ENSFCAG00000045571 #31	IL27 (ENSFCAG00000012295) #32	NUPR1 (ENSFCAG00000012296) #33	SGF29 (ENSFCAG00000012297) #34	ENSFCAG00000027639	ENSFCAG00000016231 #36	ENSFCAG00000000841 #37	ENSFCAG00000041244	CORO1A (ENSFCAG00000001301)
Panthera	ANCESTRAL SPECIES	37	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
Panthera_a	ANCESTRAL SPECIES	36	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
leopard	MODERN SPECIES	142	AQP8 (ENSPPRG00000005190)	ZKSCAN2 (ENSPPRG00000004783)	HS3ST4 (ENSPPRG00000004703)	KDM8 (ENSPPRG00000004558) #9	NSMCE1 (ENSPPRG00000004468) #10	IL4R (ENSPPRG00000004375) #11	IL21R (ENSPPRG00000004198) #12	KATNIP (ENSPPRG00000002577) #14	GSG1L (ENSPPRG00000001919) #15	XPO6 (ENSPPRG00000001454) #16	SBK1 (ENSPPRG00000000814) #18	LAT (ENSPPRG00000000687) #19	SPNS1 (ENSPPRG00000023286) #20	ENSPPRG00000021925 #21	CD19 (ENSPPRG00000021406) #24	RABEP2 (ENSPPRG00000019544) #22	ATP2A1 (ENSPPRG00000018136) #25	SH2B1 (ENSPPRG00000016173) #26	TUFM (ENSPPRG00000014248) #27	ENSPPRG00000013894	ATXN2L (ENSPPRG00000013690) #28	ENSPPRG00000012336 #29	CLN3 (ENSPPRG00000009374) #30	ENSPPRG00000007159 #31	IL27 (ENSPPRG00000006885) #32	NUPR1 (ENSPPRG00000006847) #33	SGF29 (ENSPPRG00000006831) #34	ENSPPRG00000006806	ENSPPRG00000005498 #36	ENSPPRG00000005264 #37
lion	MODERN SPECIES	16	ZKSCAN2 (ENSPLOG00000022392)	HS3ST4 (ENSPLOG00000022401)	KDM8 (ENSPLOG00000022410) #9	NSMCE1 (ENSPLOG00000022421) #10	IL4R (ENSPLOG00000022425) #11	IL21R (ENSPLOG00000022434) #12	GTF3C1 (ENSPLOG00000022448) #13	KATNIP (ENSPLOG00000022507) #14	GSG1L (ENSPLOG00000022578) #15	XPO6 (ENSPLOG00000022588) #16	SBK1 (ENSPLOG00000022602) #18	LAT (ENSPLOG00000022609) #19	SPNS1 (ENSPLOG00000022621) #20	NFATC2IP (ENSPLOG00000022642) #21	CD19 (ENSPLOG00000011429) #24	RABEP2 (ENSPLOG00000011523) #22	ATP2A1 (ENSPLOG00000011731) #25	SH2B1 (ENSPLOG00000012277) #26	TUFM (ENSPLOG00000012538) #27	ATXN2L (ENSPLOG00000012670) #28	ENSPLOG00000013368 #29	CLN3 (ENSPLOG00000013507) #30	ENSPLOG00000013898 #31	IL27 (ENSPLOG00000013939) #32	NUPR1 (ENSPLOG00000014005) #33	SGF29 (ENSPLOG00000014051) #34	ENSPLOG00000014102	ENSPLOG00000014152 #36	ENSPLOG00000014261 #37	SEPTIN14 (ENSPLOG00000014348)	ZNF713 (ENSPLOG00000014498)
Tiger	MODERN SPECIES	196	ARHGAP17 (ENSPTIG00000020948)	LCMT1 (ENSPTIG00000019891)	AQP8 (ENSPTIG00000018909)	ZKSCAN2 (ENSPTIG00000018448)	KDM8 (ENSPTIG00000017120) #9	NSMCE1 (ENSPTIG00000013962) #10	IL4R (ENSPTIG00000010825) #11	IL21R (ENSPTIG00000008459) #12	KATNIP (ENSPTIG00000019879) #14	ENSPTIG00000019254 #15	XPO6 (ENSPTIG00000016663) #16	LAT (ENSPTIG00000012280) #19	SPNS1 (ENSPTIG00000021908) #20	ENSPTIG00000021657 #21	CD19 (ENSPTIG00000019331) #24	ENSPTIG00000019215 #22	ATP2A1 (ENSPTIG00000014935) #25	SH2B1 (ENSPTIG00000011179) #26	TUFM (ENSPTIG00000009980) #27	ATXN2L (ENSPTIG00000015041) #28	ENSPTIG00000011712 #29	CLN3 (ENSPTIG00000018824) #30	ENSPTIG00000015631 #31	IL27 (ENSPTIG00000015053) #32	NUPR1 (ENSPTIG00000014841) #33	SGF29 (ENSPTIG00000014381) #34	ENSPTIG00000012172	ENSPTIG00000011699 #36	ENSPTIG00000011475 #37
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760.l #37	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
Canidae	ANCESTRAL SPECIES	3	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760.l #37	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37
Red fox	MODERN SPECIES	85	ENSVVUG00000024100	ENSVVUG00000024108 #8	KDM8 (ENSVVUG00000024109) #9	NSMCE1 (ENSVVUG00000024114) #10	IL4R (ENSVVUG00000024117) #11	IL21R (ENSVVUG00000024119) #12	GTF3C1 (ENSVVUG00000024131) #13	KIAA0556 (ENSVVUG00000024138) #14	GSG1L (ENSVVUG00000024148) #15	XPO6 (ENSVVUG00000024150) #16	SBK1 (ENSVVUG00000024152) #18	LAT (ENSVVUG00000024156) #19	SPNS1 (ENSVVUG00000024158) #20	NFATC2IP (ENSVVUG00000024159) #21	CD19 (ENSVVUG00000024162) #24	RABEP2 (ENSVVUG00000024164) #22	ATP2A1 (ENSVVUG00000024165) #25	SH2B1 (ENSVVUG00000024167) #26	TUFM (ENSVVUG00000024170) #27	ATXN2L (ENSVVUG00000024239) #28	ENSVVUG00000025970 #29	CLN3 (ENSVVUG00000025976) #30	ENSVVUG00000025984 #31	IL27 (ENSVVUG00000025986) #32	NUPR1 (ENSVVUG00000025987) #33	SGF29 (ENSVVUG00000025989) #34	ENSVVUG00000025991 #37	ENSVVUG00000025992	ENSVVUG00000025994 #36	CORO1A (ENSVVUG00000025995)	ENSVVUG00000026001
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00980000203015	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628
Dog	MODERN SPECIES	34	ENSCAFG00845004500	C6H16orf82 (ENSCAFG00845004342) #8	KDM8 (ENSCAFG00845004325) #9	NSMCE1 (ENSCAFG00845004303) #10	IL4R (ENSCAFG00845004286) #11	IL21R (ENSCAFG00845004274) #12	GTF3C1 (ENSCAFG00845004156) #13	KATNIP (ENSCAFG00845003910) #14	GSG1L (ENSCAFG00845003811) #15	XPO6 (ENSCAFG00845003716) #16	SBK1 (ENSCAFG00845003686) #18	ENSCAFG00845003673 #19	NFATC2IP (ENSCAFG00845003632) #21	CD19 (ENSCAFG00845003588) #24	SPNS1 (ENSCAFG00845003491) #20	RABEP2 (ENSCAFG00845003368) #22	ATP2A1 (ENSCAFG00845003233) #25	SH2B1 (ENSCAFG00845003120) #26	TUFM (ENSCAFG00845003028) #27	ATXN2L (ENSCAFG00845002746) #28	ENSCAFG00845002633	ENSCAFG00845002564 #29	CLN3 (ENSCAFG00845002428) #30	ENSCAFG00845002326 #31	IL27 (ENSCAFG00845002305) #32	NUPR1 (ENSCAFG00845002289) #33	SGF29 (ENSCAFG00845002246) #34	SULT1A1 (ENSCAFG00845002193)	SLX1A (ENSCAFG00845002150) #36	ENSCAFG00845002114 #37	CORO1A (ENSCAFG00845002083)
Dingo	MODERN SPECIES	172	ENSCAFG00020010740	KDM8 (ENSCAFG00020010762) #9	NSMCE1 (ENSCAFG00020010765) #10	IL4R (ENSCAFG00020010769) #11	IL21R (ENSCAFG00020010771) #12	GTF3C1 (ENSCAFG00020010922) #13	KATNIP (ENSCAFG00020011691) #14	ENSCAFG00020011802	ENSCAFG00020011803	XPO6 (ENSCAFG00020011808) #16	SBK1 (ENSCAFG00020011819) #18	LAT (ENSCAFG00020011822) #19	SPNS1 (ENSCAFG00020011824) #20	ENSCAFG00020011825 #21	CD19 (ENSCAFG00020011829) #24	RABEP2 (ENSCAFG00020011856) #22	ATP2A1 (ENSCAFG00020011964) #25	SH2B1 (ENSCAFG00020017571) #26	TUFM (ENSCAFG00020017574) #27	ATXN2L (ENSCAFG00020017576) #28	ENSCAFG00020017585	ENSCAFG00020017587 #29	CLN3 (ENSCAFG00020017592) #30	ENSCAFG00020017593 #31	IL27 (ENSCAFG00020017594) #32	NUPR1 (ENSCAFG00020017596) #33	SGF29 (ENSCAFG00020017597) #34	ENSCAFG00020017598	ENSCAFG00020017600 #36	ENSCAFG00020017602 #37	CORO1A (ENSCAFG00020017604)
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a.b #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628	ENSGT00940000160691
Mustelinae	ANCESTRAL SPECIES	52	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566.p #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a.b #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628	ENSGT00940000160691
American mink	MODERN SPECIES	391		ENSNVIG00000007560	KDM8 (ENSNVIG00000007524) #9	NSMCE1 (ENSNVIG00000007484) #10	IL4R (ENSNVIG00000007402) #11	IL21R (ENSNVIG00000007292) #12	GTF3C1 (ENSNVIG00000007129) #13	KATNIP (ENSNVIG00000006561) #14	ENSNVIG00000006379 #15	XPO6 (ENSNVIG00000006151) #16	SBK1 (ENSNVIG00000006059) #18	C7C5T7 (ENSNVIG00000005616) #19	SPNS1 (ENSNVIG00000005247) #20	NFATC2IP (ENSNVIG00000005083) #21	CD19 (ENSNVIG00000004900) #24	RABEP2 (ENSNVIG00000004705) #22	ATP2A1 (ENSNVIG00000004278) #25	SH2B1 (ENSNVIG00000003954) #26	TUFM (ENSNVIG00000003871) #27	ATXN2L (ENSNVIG00000002907) #28	ENSNVIG00000002320 #29	CLN3 (ENSNVIG00000001456) #30	ENSNVIG00000001411 #31	IL27 (ENSNVIG00000001395) #32	NUPR1 (ENSNVIG00000001385) #33	ENSNVIG00000001378	SGF29 (ENSNVIG00000001363) #34	ENSNVIG00000001333	ENSNVIG00000001272 #36	ENSNVIG00000001257 #37	CORO1A (ENSNVIG00000000987)
Ferret	MODERN SPECIES	349	XPO6 (ENSMPUG00000012920) #16	ENSMPUG00000012919 #18	LAT (ENSMPUG00000012888) #19	SPNS1 (ENSMPUG00000012882) #20	NFATC2IP (ENSMPUG00000012877) #21	CD19 (ENSMPUG00000012873) #24	ATP2A1 (ENSMPUG00000012865) #25	SH2B1 (ENSMPUG00000012822) #26	TUFM (ENSMPUG00000012816) #27	ATXN2L (ENSMPUG00000012807) #28	ENSMPUG00000012732 #29	CLN3 (ENSMPUG00000012727) #30	APOBR (ENSMPUG00000012721) #31	IL27 (ENSMPUG00000012719) #32	ENSMPUG00000012680	RABEP2 (ENSMPUG00000012675) #22	SGF29 (ENSMPUG00000012669) #34	ENSMPUG00000012666	CORO1A (ENSMPUG00000012662)	MAPK3 (ENSMPUG00000012636)	GDPD3 (ENSMPUG00000012608)	YPEL3 (ENSMPUG00000012595)	TBX6 (ENSMPUG00000012586)	PPP4C (ENSMPUG00000012567)	ALDOA (ENSMPUG00000012563)	ENSMPUG00000012556	TLCD3B (ENSMPUG00000012551)	DOC2A (ENSMPUG00000012544)	INO80E (ENSMPUG00000012526)	HIRIP3 (ENSMPUG00000012514)	ENSMPUG00000012512
Ursidae	ANCESTRAL SPECIES	3	ENSGT00940000161466	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895.r #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a.b #33	ENSGT01010000224051	ENSGT00390000015229 #34	ENSGT00940000162765.d	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628
Giant Panda	MODERN SPECIES	1	ENSAMEG00000018940	ENSAMEG00000028668 #8	KDM8 (ENSAMEG00000004035) #9	NSMCE1 (ENSAMEG00000004050) #10	IL4R (ENSAMEG00000025719) #11	IL21R (ENSAMEG00000011163) #12	GTF3C1 (ENSAMEG00000011092) #13	KATNIP (ENSAMEG00000011063) #14	GSG1L (ENSAMEG00000030428) #15	XPO6 (ENSAMEG00000011014) #16	ENSAMEG00000025514 #18	ENSAMEG00000015743 #19	SPNS1 (ENSAMEG00000015718) #20	NFATC2IP (ENSAMEG00000031258) #21	CD19 (ENSAMEG00000015679) #24	RABEP2 (ENSAMEG00000015650) #22	ATP2A1 (ENSAMEG00000015582) #25	SH2B1 (ENSAMEG00000015562) #26	TUFM (ENSAMEG00000015551) #27	ENSAMEG00000015502 #28	ENSAMEG00000015454 #29	CLN3 (ENSAMEG00000015418) #30	ENSAMEG00000024129 #31	IL27 (ENSAMEG00000015411) #32	NUPR1 (ENSAMEG00000025024) #33	ENSAMEG00000026872	ENSAMEG00000015358	ENSAMEG00000024453 #34	ENSAMEG00000015347 #36	ENSAMEG00000015343 #37	CORO1A (ENSAMEG00000015314)
Ursus	ANCESTRAL SPECIES	48	ENSGT00940000159304	ENSGT00940000161884	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT00390000002810 #16	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895.r #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a.b #33	ENSGT01010000224051	ENSGT00390000015229 #34	ENSGT00940000162765.d	ENSGT00390000013368 #36	ENSGT00510000047760.k.b #37	ENSGT00940000160628
American black bear	MODERN SPECIES	2997										SBK1 (ENSUAMG00000015758) #18	ENSUAMG00000015759	SPNS1 (ENSUAMG00000015763) #20	ENSUAMG00000015765 #21	ENSUAMG00000015766 #21	CD19 (ENSUAMG00000015769) #24	RABEP2 (ENSUAMG00000015785) #22	ATP2A1 (ENSUAMG00000015908) #25
Polar bear	MODERN SPECIES	120	ZKSCAN2 (ENSUMAG00000006189)	ENSUMAG00000006200	ENSUMAG00000006208	KDM8 (ENSUMAG00000006224) #9	NSMCE1 (ENSUMAG00000006230) #10	IL4R (ENSUMAG00000006244) #11	IL21R (ENSUMAG00000006302) #12	GTF3C1 (ENSUMAG00000006401) #13	KATNIP (ENSUMAG00000007028) #14	ENSUMAG00000007050	XPO6 (ENSUMAG00000007086) #16	ENSUMAG00000007419 #19	SPNS1 (ENSUMAG00000007430) #20	ENSUMAG00000007453 #21	CD19 (ENSUMAG00000007461) #24	ENSUMAG00000007480 #22	ATP2A1 (ENSUMAG00000007661) #25	SH2B1 (ENSUMAG00000009333) #26	TUFM (ENSUMAG00000009341) #27	ATXN2L (ENSUMAG00000009437) #28	ENSUMAG00000010927 #29	CLN3 (ENSUMAG00000010931) #30	APOBR (ENSUMAG00000010941) #31	IL27 (ENSUMAG00000010951) #32	NUPR1 (ENSUMAG00000010958) #33	ENSUMAG00000010962	SGF29 (ENSUMAG00000010966) #34	ENSUMAG00000010973	ENSUMAG00000010981 #36	ENSUMAG00000010989 #37	CORO1A (ENSUMAG00000010996)
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.a #37	ENSGT00940000160628	ENSGT00940000160691
Chiroptera	ANCESTRAL SPECIES	12	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119.p #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.l #37	ENSGT00940000160628	ENSGT00940000160691
Microchiroptera	ANCESTRAL SPECIES	17	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119.p #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.l #37	ENSGT00940000160628	ENSGT00940000160691
Greater horseshoe bat	MODERN SPECIES	47	SNRNP25 (ENSRFEG00010021105)	POLR3K (ENSRFEG00010021086)	ENSRFEG00010021074	IL9R (ENSRFEG00010021059)	IL4R (ENSRFEG00010020996) #11	IL21R (ENSRFEG00010020976) #12	GTF3C1 (ENSRFEG00010020898) #13	KATNIP (ENSRFEG00010020817) #14	GSG1L (ENSRFEG00010020773) #15	XPO6 (ENSRFEG00010020739) #16	SBK1 (ENSRFEG00010020697) #18	LAT (ENSRFEG00010020650) #19	SPNS1 (ENSRFEG00010020435) #20	NFATC2IP (ENSRFEG00010020307) #21	CD19 (ENSRFEG00010020292) #24	RABEP2 (ENSRFEG00010020138) #22	ATP2A1 (ENSRFEG00010020028) #25	SH2B1 (ENSRFEG00010019900) #26	TUFM (ENSRFEG00010019864) #27	ATXN2L (ENSRFEG00010019468) #28	ENSRFEG00010019372 #29	CLN3 (ENSRFEG00010019061) #30	APOBR (ENSRFEG00010019012) #31	IL27 (ENSRFEG00010018956) #32	NUPR1 (ENSRFEG00010018921) #33	ENSRFEG00010018897	ENSRFEG00010018844	TBX6 (ENSRFEG00010018705)	PPP4C (ENSRFEG00010018661)	ALDOA (ENSRFEG00010018577)	ENSRFEG00010018470
Microbat	MODERN SPECIES	1604												LAT (ENSMLUG00000024673) #19	SPNS1 (ENSMLUG00000022931) #20	NFATC2IP (ENSMLUG00000011851) #21	ENSMLUG00000011825 #24	RABEP2 (ENSMLUG00000009993) #22	ATP2A1 (ENSMLUG00000009938) #25	SH2B1 (ENSMLUG00000009913) #26	ATXN2L (ENSMLUG00000009877) #28	ENSMLUG00000015558 #29	ENSMLUG00000027261	CLN3 (ENSMLUG00000003158) #30	APOBR (ENSMLUG00000003173) #31	ENSMLUG00000026432 #32	NUPR1 (ENSMLUG00000000678) #33
Megabat	MODERN SPECIES	2103												LAT (ENSPVAG00000003977) #19	SPNS1 (ENSPVAG00000003976) #20	NFATC2IP (ENSPVAG00000003975) #21	CD19 (ENSPVAG00000003971) #24	RABEP2 (ENSPVAG00000003969) #22	ATP2A1 (ENSPVAG00000003966) #25	SH2B1 (ENSPVAG00000003963) #26	ENSPVAG00000003960 #27	ATXN2L (ENSPVAG00000003958) #28
Equus	ANCESTRAL SPECIES	22	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760.k.a #37	ENSGT00940000160628	ENSGT00940000160691
Horse	MODERN SPECIES	4	KDM8 (ENSECAG00000000684) #9	NSMCE1 (ENSECAG00000024006) #10	IL4R (ENSECAG00000021525) #11	IL21R (ENSECAG00000019322) #12	GTF3C1 (ENSECAG00000010534) #13	KATNIP (ENSECAG00000020012) #14	ENSECAG00000054135	GSG1L (ENSECAG00000018734) #15	XPO6 (ENSECAG00000008601) #16	SBK1 (ENSECAG00000007688) #18	ENSECAG00000046395	LAT (ENSECAG00000021184) #19	SPNS1 (ENSECAG00000012372) #20	NFATC2IP (ENSECAG00000010483) #21	CD19 (ENSECAG00000024105) #24	RABEP2 (ENSECAG00000020116) #22	ATP2A1 (ENSECAG00000012593) #25	SH2B1 (ENSECAG00000023542) #26	TUFM (ENSECAG00000019763) #27	ATXN2L (ENSECAG00000007301) #28	ENSECAG00000008746 #29	CLN3 (ENSECAG00000017435) #30	APOBR (ENSECAG00000016962) #31	IL27 (ENSECAG00000014957) #32	ENSECAG00000058069	SGF29 (ENSECAG00000011445) #34	SLX1A (ENSECAG00000021518) #36	ENSECAG00000037409	CORO1A (ENSECAG00000024788)	MAPK3 (ENSECAG00000014460)	GDPD3 (ENSECAG00000006934)
Donkey	MODERN SPECIES	5	ENSEASG00005025359	KDM8 (ENSEASG00005017358) #9	NSMCE1 (ENSEASG00005017351) #10	IL4R (ENSEASG00005017345) #11	IL21R (ENSEASG00005017341) #12	GTF3C1 (ENSEASG00005017333) #13	ENSEASG00005036683	KATNIP (ENSEASG00005017319) #14	GSG1L (ENSEASG00005035253) #15	XPO6 (ENSEASG00005017296) #16	ENSEASG00005017290 #18	ENSEASG00005017287 #19	SPNS1 (ENSEASG00005017224) #20	NFATC2IP (ENSEASG00005023626) #21	CD19 (ENSEASG00005017213) #24	RABEP2 (ENSEASG00005017191) #22	ATP2A1 (ENSEASG00005015630) #25	SH2B1 (ENSEASG00005015491) #26	TUFM (ENSEASG00005015477) #27	ENSEASG00005014992 #28	ENSEASG00005014845 #29	CLN3 (ENSEASG00005014804) #30	APOBR (ENSEASG00005032498) #31	IL27 (ENSEASG00005014757) #32	NUPR1 (ENSEASG00005014755) #33	ENSEASG00005014751 #34	ENSEASG00005014748	ENSEASG00005037119 #36	ENSEASG00005035779 #37	CORO1A (ENSEASG00005014707)	MAPK3 (ENSEASG00005014689)
Atlantogenata	ANCESTRAL SPECIES	29	ENSGT00940000162492	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Afrotheria	ANCESTRAL SPECIES	28	ENSGT00940000162492	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Afrotheria_a	ANCESTRAL SPECIES	28	ENSGT00940000162492	ENSGT00390000001471 #8	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691
Elephant	MODERN SPECIES	503	ENSLAFG00000029462 #8	KDM8 (ENSLAFG00000018540) #9	NSMCE1 (ENSLAFG00000018542) #10	IL4R (ENSLAFG00000016975) #11	IL21R (ENSLAFG00000001497) #12	GTF3C1 (ENSLAFG00000029518) #13	KATNIP (ENSLAFG00000002456) #14	GSG1L (ENSLAFG00000016583) #15	XPO6 (ENSLAFG00000011960) #16	ENSLAFG00000029118	SBK1 (ENSLAFG00000031675) #18	LAT (ENSLAFG00000029199) #19	SPNS1 (ENSLAFG00000026041) #20	NFATC2IP (ENSLAFG00000021501) #21	ENSLAFG00000031973 #24	RABEP2 (ENSLAFG00000016724) #22	ATP2A1 (ENSLAFG00000016717) #25	SH2B1 (ENSLAFG00000016709) #26	TUFM (ENSLAFG00000028911) #27	ATXN2L (ENSLAFG00000018143) #28	ENSLAFG00000027426 #29	CLN3 (ENSLAFG00000000109) #30	APOBR (ENSLAFG00000022087) #31	IL27 (ENSLAFG00000009155) #32	NUPR1 (ENSLAFG00000030010) #33	SGF29 (ENSLAFG00000028439) #34	ENSLAFG00000017912	ENSLAFG00000020821 #36	ENSLAFG00000017910 #37	CORO1A (ENSLAFG00000029519)	MAPK3 (ENSLAFG00000017904)
Hyrax	MODERN SPECIES	5201												LAT (ENSPCAG00000015946) #19	SPNS1 (ENSPCAG00000015873) #20	ENSPCAG00000015793 #21	CD19 (ENSPCAG00000015699) #24	RABEP2 (ENSPCAG00000015605) #22	ATP2A1 (ENSPCAG00000015449) #25	SH2B1 (ENSPCAG00000015358) #26	TUFM (ENSPCAG00000015294) #27	ATXN2L (ENSPCAG00000015179) #28
Tenrec	MODERN SPECIES	7991														ENSETEG00000009604 #26	TUFM (ENSETEG00000009601) #27	ENSETEG00000009599 #22	ATP2A1 (ENSETEG00000009594) #25
Xenarthra	ANCESTRAL SPECIES	44										ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00390000018206 #32	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00510000047760 #37	ENSGT00940000160628	ENSGT00940000160691	ENSGT00940000160759
Armadillo	MODERN SPECIES	1820									XPO6 (ENSDNOG00000012449) #16	SBK1 (ENSDNOG00000044582) #18	ENSDNOG00000040555 #19	ENSDNOG00000033162	SPNS1 (ENSDNOG00000033114) #20	NFATC2IP (ENSDNOG00000032794) #21	ENSDNOG00000030838 #24	RABEP2 (ENSDNOG00000033436) #22	ATP2A1 (ENSDNOG00000000440) #25	ENSDNOG00000047782 #26	TUFM (ENSDNOG00000047636) #27	ATXN2L (ENSDNOG00000009821) #28	ENSDNOG00000031497 #29	CLN3 (ENSDNOG00000009229) #30	ENSDNOG00000039014 #31	IL27 (ENSDNOG00000018495) #32	NUPR1 (ENSDNOG00000011508) #33	SGF29 (ENSDNOG00000048338) #34	ENSDNOG00000006489	ENSDNOG00000039000 #37	CORO1A (ENSDNOG00000000766)	MAPK3 (ENSDNOG00000040002)	GDPD3 (ENSDNOG00000002189)
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT01030000238087	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00940000164396	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00960000187477	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT01030000238087	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00530000065031 #31	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00940000164396	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36
Diprotodontia	ANCESTRAL SPECIES	19	ENSGT00940000161884	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT01030000238087	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00940000164396	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37
Diprotodontia_a	ANCESTRAL SPECIES	21	ENSGT00940000161884.b	ENSGT00940000161466	ENSGT00940000158074 #9	ENSGT00390000009084 #10	ENSGT00510000049182 #11	ENSGT00510000048783 #12	ENSGT00390000008664 #13	ENSGT00390000004566 #14	ENSGT01050000244814.a.a.a.a #15	ENSGT00390000002810 #16	ENSGT00940000154852.a #18	ENSGT00390000014223 #19	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT00950000183191.a.a #26	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT01030000238087	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00970000197238	ENSGT00390000018206 #32	ENSGT00940000164396	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00940000162765	ENSGT00390000013368 #36	ENSGT00510000047760 #37
koala	MODERN SPECIES	116										SBK1 (ENSPCIG00000008874) #18	ENSPCIG00000033738 #19	SPNS1 (ENSPCIG00000025215) #20	ENSPCIG00000025214 #21	ENSPCIG00000031414	ENSPCIG00000025213 #24	RABEP2 (ENSPCIG00000025212) #22	ATP2A1 (ENSPCIG00000025210) #25	TUFM (ENSPCIG00000025208) #27	ATXN2L (ENSPCIG00000025207) #28	ENSPCIG00000036103	ENSPCIG00000025206 #29	CLN3 (ENSPCIG00000025205) #30	ENSPCIG00000025204	ENSPCIG00000025203 #32	ENSPCIG00000025202	NUPR1 (ENSPCIG00000025201) #33	SGF29 (ENSPCIG00000025200) #34	ENSPCIG00000025199	ENSPCIG00000025197 #36	ENSPCIG00000025198 #37	CORO1A (ENSPCIG00000025196)
Common wonbat	MODERN SPECIES	1009	ENSVURG00010007181	KDM8 (ENSVURG00010007200) #9	ENSVURG00010007211 #10	ENSVURG00010007222 #11	ENSVURG00010007240	ENSVURG00010007249 #12	GTF3C1 (ENSVURG00010007270) #13	KATNIP (ENSVURG00010007341) #14	GSG1L (ENSVURG00010007417) #15	XPO6 (ENSVURG00010007445) #16	SBK1 (ENSVURG00010007515) #18	ENSVURG00010007521 #19	ENSVURG00010007536 #20	ENSVURG00010007555 #21	ENSVURG00010007568 #24	RABEP2 (ENSVURG00010007580) #22	ATP2A1 (ENSVURG00010007618) #25	SH2B1 (ENSVURG00010007679) #26	TUFM (ENSVURG00010007718) #27	ATXN2L (ENSVURG00010008363) #28	ENSVURG00010008418 #29	ENSVURG00010008441 #30	ENSVURG00010008460	ENSVURG00010008464 #32	ENSVURG00010008469	NUPR1 (ENSVURG00010008479) #33	SGF29 (ENSVURG00010008483) #34	ENSVURG00010008499	ENSVURG00010008520 #36	ENSVURG00010008527 #37	CORO1A (ENSVURG00010008536)
Wallaby	MODERN SPECIES	8578																RABEP2 (ENSMEUG00000008140) #22	ATP2A1 (ENSMEUG00000008102) #25	SH2B1 (ENSMEUG00000008081) #26
Tasmanian devil	MODERN SPECIES		ENSSHAG00000013237	ENSSHAG00000023033	ENSSHAG00000022299	KDM8 (ENSSHAG00000010301) #9	NSMCE1 (ENSSHAG00000029711) #10	ENSSHAG00000022047 #11	ENSSHAG00000008150 #12	GTF3C1 (ENSSHAG00000006821) #13	KATNIP (ENSSHAG00000004942) #14	GSG1L (ENSSHAG00000027499) #15	XPO6 (ENSSHAG00000013864) #16	ENSSHAG00000024386 #18	ENSSHAG00000012688 #19	SPNS1 (ENSSHAG00000012594) #20	ENSSHAG00000012438 #24	RABEP2 (ENSSHAG00000012362) #22	ATP2A1 (ENSSHAG00000012241) #25	SH2B1 (ENSSHAG00000012175) #26	TUFM (ENSSHAG00000012121) #27	ATXN2L (ENSSHAG00000012015) #28	ENSSHAG00000030153	ENSSHAG00000029595 #30	ENSSHAG00000021083 #29	ENSSHAG00000021816 #31	ENSSHAG00000011560	SGF29 (ENSSHAG00000025052) #34	NUPR1 (ENSSHAG00000028845) #33	ENSSHAG00000027944	ENSSHAG00000020620 #36	CORO1A (ENSSHAG00000030444)	MAPK3 (ENSSHAG00000031471)
Opossum	MODERN SPECIES	5	ENSMODG00000037856	ENSMODG00000036445	KDM8 (ENSMODG00000015460) #9	NSMCE1 (ENSMODG00000015463) #10	ENSMODG00000022952 #11	ENSMODG00000015469 #12	GTF3C1 (ENSMODG00000015484) #13	KATNIP (ENSMODG00000015496) #14	GSG1L (ENSMODG00000035824) #15	XPO6 (ENSMODG00000015516) #16	SBK1 (ENSMODG00000049633) #18	SPNS1 (ENSMODG00000015527) #20	ENSMODG00000046011 #21	ENSMODG00000043177 #24	ENSMODG00000044550	ENSMODG00000015541 #22	ATP2A1 (ENSMODG00000015558) #25	SH2B1 (ENSMODG00000022951) #26	TUFM (ENSMODG00000015564) #27	ATXN2L (ENSMODG00000015570) #28	ENSMODG00000040870	ENSMODG00000015579 #29	CLN3 (ENSMODG00000015602) #30	ENSMODG00000050004	ENSMODG00000015627 #32	ENSMODG00000015635	NUPR1 (ENSMODG00000015638) #33	ENSMODG00000015650	ENSMODG00000015656 #36	ENSMODG00000015642 #34	ENSMODG00000015658 #37
Platypus	MODERN SPECIES	11	HS3ST2 (ENSOANG00000029206)	ENSOANG00000050027	KDM8 (ENSOANG00000010988) #9	NSMCE1 (ENSOANG00000010987) #10	ENSOANG00000044614 #11	ENSOANG00000047084 #12	GTF3C1 (ENSOANG00000045899) #13	KATNIP (ENSOANG00000012486) #14	ENSOANG00000038247 #15	XPO6 (ENSOANG00000010929) #16	SBK1 (ENSOANG00000008664) #18	ENSOANG00000043596 #19	SPNS1 (ENSOANG00000037511) #20	ENSOANG00000008850 #21	ENSOANG00000030704 #24	RABEP2 (ENSOANG00000003014) #22	ATP2A1 (ENSOANG00000012973) #25	SH2B1 (ENSOANG00000043366) #26	TUFM (ENSOANG00000013114) #27	ATXN2L (ENSOANG00000013115) #28	ENSOANG00000011410 #29	CLN3 (ENSOANG00000011411) #30	ENSOANG00000050411	ENSOANG00000036355 #32	ENSOANG00000014812	ENSOANG00000038353	SGF29 (ENSOANG00000009696) #34	SULT1A (ENSOANG00000009695)	ENSOANG00000011907 #36	ENSOANG00000042768 #37	CORO1A (ENSOANG00000043537)
Sauria	ANCESTRAL SPECIES	48	ENSGT00510000047760 #37	ENSGT00390000013368 #36	ENSGT00390000015229 #34	ENSGT00530000064242.a #33	ENSGT00500000045140.a.a	ENSGT00940000157101.d	ENSGT00940000164396	ENSGT00390000003249 #30	ENSGT00390000017900 #29	ENSGT00390000006265.a	ENSGT00940000160506	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00940000163371.b.a.a	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25
Archelosauria	ANCESTRAL SPECIES	82												ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00940000163371.b.a.a	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25
Cryptodira	ANCESTRAL SPECIES	110												ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00940000163371.b.a.a	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25
Testudinoidea	ANCESTRAL SPECIES	75										ENSGT00940000163342	ENSGT00390000005976.b #20	ENSGT00390000007119 #21	ENSGT00940000163371.b.a.a	ENSGT00950000186360	ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00970000193829	ENSGT00940000159895 #25
Testudinidae	ANCESTRAL SPECIES	124															ENSGT00390000014991 #24	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00970000193829	ENSGT00940000159895 #25
Goode s thornscrub tortoise	MODERN SPECIES	198													ENSGEVG00005015715	ENSGEVG00005015685	ENSGEVG00005015653 #24	RABEP2 (ENSGEVG00005015596) #22	TUFM (ENSGEVG00005015571) #27	ATXN2L (ENSGEVG00005015512) #28	SH2B1 (ENSGEVG00005015482) #26	ATP2A1 (ENSGEVG00005015115) #25
Abingdon island giant tortoise	MODERN SPECIES	462															ENSCABG00000007714	RABEP2 (ENSCABG00000007685) #22	TUFM (ENSCABG00000007681) #27	ATXN2L (ENSCABG00000007676) #28	SH2B1 (ENSCABG00000007673) #26	ENSCABG00000007672	ENSCABG00000007670 #25
Emydidae	ANCESTRAL SPECIES	172															ENSGT00950000186360	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25
painted turtle	MODERN SPECIES	1209											SPNS1 (ENSCPBG00000003952) #20	ENSCPBG00000003942	ENSCPBG00000003929 #21	ENSCPBG00000003918	ENSCPBG00000003909	RABEP2 (ENSCPBG00000003883) #22	TUFM (ENSCPBG00000003874) #27	ATXN2L (ENSCPBG00000003859) #28	SH2B1 (ENSCPBG00000003836) #26	ATP2A1 (ENSCPBG00000003726) #25
Chinese turtle	MODERN SPECIES	855															ENSPSIG00000002842	RABEP2 (ENSPSIG00000002836) #22
Lepidosauria	ANCESTRAL SPECIES	126						ENSGT00390000015229 #34	ENSGT00530000064242.a #33	ENSGT00950000185235	ENSGT00500000045140.a.a	ENSGT00940000157101.d	ENSGT00940000164396	ENSGT00390000003249 #30	ENSGT00390000017900 #29	ENSGT00390000006265.a	ENSGT00940000160506	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00940000163371.b.a.a	ENSGT00390000007119 #21	ENSGT00390000005976.b #20
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000163157	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000168900	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00390000005976.b #20	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00940000164396	ENSGT00940000163342	ENSGT00940000157101.d.a.b	ENSGT00940000157101.d.a.a.a.a	ENSGT00940000157101.d.a.a.b	ENSGT00500000045140.a.a
Laterata	ANCESTRAL SPECIES	34	ENSGT00940000161485	ENSGT00940000163157	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00940000163371.b.a.a	ENSGT00390000007119 #21	ENSGT00390000005976.b #20	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00940000164396.g	ENSGT00940000163342	ENSGT00940000157101.d.a.a.a.a	ENSGT00940000157101.d.a.a.b
Argentine black and white tegu	MODERN SPECIES	38	ENSSMRG00000004189	ENSSMRG00000004198	ENSSMRG00000004199	ENSSMRG00000004204	ENSSMRG00000004205	GYS1 (ENSSMRG00000004209)	PRMT1 (ENSSMRG00000004215)	ENSSMRG00000004219	ENSSMRG00000004222	AKT1S1 (ENSSMRG00000004223)	TBC1D17 (ENSSMRG00000004224)	ENSSMRG00000004229	ENSSMRG00000004231	ENSSMRG00000004235	ACP4 (ENSSMRG00000004243)	RABEP2 (ENSSMRG00000004245) #22	TUFM (ENSSMRG00000004247) #27	ATXN2L (ENSSMRG00000004249) #28	SH2B1 (ENSSMRG00000004252) #26	ATP2A1 (ENSSMRG00000004267) #25	ENSSMRG00000004275	ENSSMRG00000004278 #21	SPNS1 (ENSSMRG00000004280) #20	ENSSMRG00000004287	ENSSMRG00000004288	ENSSMRG00000004289	ENSSMRG00000004298 #29	CLN3 (ENSSMRG00000004317) #30	ENSSMRG00000004341	ENSSMRG00000004349	ENSSMRG00000004350
Common wall lizard	MODERN SPECIES	4	TEAD2 (ENSPMRG00000017948)	CD37 (ENSPMRG00000017941)	ENSPMRG00000017925	BAX (ENSPMRG00000017916)	ENSPMRG00000017911	ENSPMRG00000017910	GYS1 (ENSPMRG00000017901)	PRMT1 (ENSPMRG00000017893)	ENSPMRG00000022359	ENSPMRG00000022357	AKT1S1 (ENSPMRG00000022352)	TBC1D17 (ENSPMRG00000022346)	ENSPMRG00000022342	ENSPMRG00000022339	ACP4 (ENSPMRG00000022323)	RABEP2 (ENSPMRG00000022233) #22	TUFM (ENSPMRG00000022210) #27	ATXN2L (ENSPMRG00000022197) #28	SH2B1 (ENSPMRG00000022174) #26	ENSPMRG00000022139	ATP2A1 (ENSPMRG00000021557) #25	ENSPMRG00000021382	ENSPMRG00000021375	ENSPMRG00000021372	ENSPMRG00000021368	ENSPMRG00000021363	ENSPMRG00000021347	ENSPMRG00000021331 #21	SPNS1 (ENSPMRG00000021321) #20	ENSPMRG00000021302	ENSPMRG00000021291
Toxicofera	ANCESTRAL SPECIES	13	ENSGT00940000163157	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000168900	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00390000005976.b #20	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00940000164396	ENSGT00940000163342	ENSGT00940000157101.d.a.a.a.b	ENSGT00940000157101.d.a.b	ENSGT00500000045140.a.a	ENSGT00950000185235
Lizard	DUPLICATION
Lizard	MODERN SPECIES	400																ENSACAG00000005299 #22
Lizard	MODERN SPECIES	901			ENSACAG00000004652	ENSACAG00000038985	ENSACAG00000029107	ENSACAG00000004713	ENSACAG00000004864	ENSACAG00000015509	ENSACAG00000004969	ENSACAG00000005085	ENSACAG00000005091	ENSACAG00000005181	ENSACAG00000040467	ENSACAG00000005243	ENSACAG00000037141	ENSACAG00000026973 #22	ENSACAG00000005399 #27	ENSACAG00000005425 #28	SH2B1 (ENSACAG00000005528) #26	ATP2A1 (ENSACAG00000005552) #25	ENSACAG00000028673	ENSACAG00000005761	ENSACAG00000005762 #21	SPNS1 (ENSACAG00000005777) #20	ENSACAG00000027873	ENSACAG00000005858	ENSACAG00000045341	ENSACAG00000034732	ENSACAG00000005937 #29	ENSACAG00000006069 #30	ENSACAG00000006142
Elapidae	ANCESTRAL SPECIES	16	ENSGT00940000161485	ENSGT00940000163157	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795.e.a #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00390000007119 #21	ENSGT01000000216248	ENSGT00390000005976.b #20	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249 #30	ENSGT00940000164396	ENSGT00940000163342	ENSGT00940000157101.d.a.a.a.b	ENSGT00940000157101.d.a.a.b
Elapidae_a	ANCESTRAL SPECIES	22	ENSGT00940000163157.e.a	ENSGT00940000163157.e.b	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748 #27	ENSGT00940000157795.e.a #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT00990000210513	ENSGT00960000191410	ENSGT01070000254666	ENSGT00390000007119 #21	ENSGT01000000216248	ENSGT00390000005976.b #20	ENSGT00530000063627.b	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249.m #30
Acanthophiinae	ANCESTRAL SPECIES	25	ENSGT00940000163157.e.a	ENSGT00940000163157.e.b	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000165851	ENSGT00390000017397.i	ENSGT00940000158989	ENSGT00940000164903	ENSGT00940000160179	ENSGT00950000182973.b.b	ENSGT00940000161433	ENSGT00530000063743.a #22	ENSGT00940000156748.a #27	ENSGT00940000157795.e.a #28	ENSGT00950000183191.a.a #26	ENSGT00940000159895 #25	ENSGT01070000254666	ENSGT00990000210513	ENSGT00960000191410	ENSGT01000000216248	ENSGT00390000007119 #21	ENSGT00390000005976.b #20	ENSGT00940000160506	ENSGT00390000006265.a	ENSGT00390000017900 #29	ENSGT00390000003249.m #30	ENSGT00940000164396
Mainland tiger snake	MODERN SPECIES	91	ENSNSUG00000005860	BAX (ENSNSUG00000005862)	ENSNSUG00000005863	ENSNSUG00000005864	ENSNSUG00000005865	GYS1 (ENSNSUG00000005866)	PRMT1 (ENSNSUG00000005867)	ENSNSUG00000005868	ENSNSUG00000005869	ENSNSUG00000005880	TBC1D17 (ENSNSUG00000005881)	ENSNSUG00000005896	ENSNSUG00000005897	ENSNSUG00000005913	ENSNSUG00000005933	RABEP2 (ENSNSUG00000005937) #22	ENSNSUG00000005941 #27	ENSNSUG00000005943 #28	SH2B1 (ENSNSUG00000006625) #26	ATP2A1 (ENSNSUG00000006632) #25	ENSNSUG00000006636	ENSNSUG00000006637	ENSNSUG00000006638	ENSNSUG00000006640	SPNS1 (ENSNSUG00000006641) #20	ENSNSUG00000006643	CABP5 (ENSNSUG00000006644)	PRODH2 (ENSNSUG00000006645)	ENSNSUG00000006649 #29	ENSNSUG00000006651 #30	ENSNSUG00000006652 #30
Eastern brown snake	MODERN SPECIES	53	ENSPTXG00000015332	BAX (ENSPTXG00000015327)	ENSPTXG00000015324	ENSPTXG00000015321	ENSPTXG00000015320	GYS1 (ENSPTXG00000015316)	PRMT1 (ENSPTXG00000015314)	ENSPTXG00000015313	ENSPTXG00000015312	ENSPTXG00000015310	TBC1D17 (ENSPTXG00000014692)	ENSPTXG00000014683	ENSPTXG00000014656	ENSPTXG00000014655	ENSPTXG00000014576	RABEP2 (ENSPTXG00000014574) #22	TUFM (ENSPTXG00000014570) #27	ENSPTXG00000014473 #28	SH2B1 (ENSPTXG00000014470) #26	ATP2A1 (ENSPTXG00000014463) #25	ENSPTXG00000014461	ENSPTXG00000014460	ENSPTXG00000014459	ENSPTXG00000014458	ENSPTXG00000014456	ENSPTXG00000014454 #21	SPNS1 (ENSPTXG00000014450) #20	ENSPTXG00000014447	CABP5 (ENSPTXG00000014445)	PRODH2 (ENSPTXG00000014425)	ENSPTXG00000014419 #29
Indian cobra	MODERN SPECIES	337	ENSNNAG00000011329	BAX (ENSNNAG00000011197)	ENSNNAG00000011178	ENSNNAG00000011165	ENSNNAG00000011147	GYS1 (ENSNNAG00000011072)	PRMT1 (ENSNNAG00000010988)	ENSNNAG00000010960	ENSNNAG00000010934	ENSNNAG00000010910	TBC1D17 (ENSNNAG00000010847)	ENSNNAG00000010822	ENSNNAG00000010636	ENSNNAG00000010608	ENSNNAG00000010255	RABEP2 (ENSNNAG00000010115) #22	TUFM (ENSNNAG00000010075) #27	ENSNNAG00000008586 #28	SH2B1 (ENSNNAG00000008404) #26	ATP2A1 (ENSNNAG00000008263) #25	ENSNNAG00000008213	ENSNNAG00000008179	ENSNNAG00000008153	ENSNNAG00000008133	SPNS1 (ENSNNAG00000007901) #20	ENSNNAG00000007825	CABP5 (ENSNNAG00000007790)	PRODH2 (ENSNNAG00000007457)	ENSNNAG00000007382 #29	CLN3 (ENSNNAG00000007338) #30	ENSNNAG00000007307
tuatara	MODERN SPECIES	1217								CLN3 (ENSSPUG00000016560) #30	ENSSPUG00000016470 #29	PRODH2 (ENSSPUG00000016425)	CABP5 (ENSSPUG00000016413)	ENSSPUG00000016378	ENSSPUG00000016362	SPNS1 (ENSSPUG00000016348) #20	ENSSPUG00000016338	RABEP2 (ENSSPUG00000016326) #22	TUFM (ENSSPUG00000016312) #27	ATXN2L (ENSSPUG00000016297) #28	SH2B1 (ENSSPUG00000016174) #26	ENSSPUG00000016125	ATP2A1 (ENSSPUG00000016110) #25	ENSSPUG00000016101	ENSSPUG00000016095	ENSSPUG00000016089	ENSSPUG00000016085	ENSSPUG00000016081	ENSSPUG00000016077	ENSSPUG00000016071	ENSSPUG00000016068	ENSSPUG00000016063	ENSSPUG00000016058
Anura	ANCESTRAL SPECIES	174	ENSGT00390000001390.b	ENSGT00390000014771.b.a	ENSGT00390000013678	ENSGT00940000160824	ENSGT00390000009925.a	ENSGT00940000162979	ENSGT00940000157696	ENSGT00940000163340	ENSGT00390000017673.a	ENSGT00940000156748 #27	ENSGT00940000157795 #28	ENSGT00950000183191.a.a.d #26	ENSGT00390000011297	ENSGT00940000164151.a.b	ENSGT00570000079101.a.a	ENSGT00530000063743.a #22	ENSGT00940000159895 #25	ENSGT01070000254666
Leishan spiny toad	MODERN SPECIES	10	ENSLLEG00000029795	ENSLLEG00000029754	ENSLLEG00000029735	ENSLLEG00000029720	ENSLLEG00000029680	HMOX2 (ENSLLEG00000029644)	CDKL4 (ENSLLEG00000029617)	TUFM (ENSLLEG00000029564) #27	ATXN2L (ENSLLEG00000029514) #28	SH2B1 (ENSLLEG00000029477) #26	MTO1 (ENSLLEG00000029450)	ENSLLEG00000029439	ENSLLEG00000029428	ENSLLEG00000029409	ENSLLEG00000029382	RABEP2 (ENSLLEG00000029351) #22	ENSLLEG00000029340	ENSLLEG00000029328	ENSLLEG00000029308	ENSLLEG00000029270	ATP2A1 (ENSLLEG00000028521) #25	ENSLLEG00000028408	JMJD8 (ENSLLEG00000028378)	ENSLLEG00000028346	STUB1 (ENSLLEG00000028276)	ENSLLEG00000028233	RHBDL1 (ENSLLEG00000028156)	RHOT2 (ENSLLEG00000027900)	WDR90 (ENSLLEG00000027718)	CFAP70 (ENSLLEG00000027429)	MSS51 (ENSLLEG00000027375)
Frog	MODERN SPECIES	9	igfals (ENSXETG00000015538)	mgrn1 (ENSXETG00000047412)	ENSXETG00000049236	ENSXETG00000043188	cdip1 (ENSXETG00000037174)	cdkl4 (ENSXETG00000042290)	nmral1 (ENSXETG00000044576)	ENSXETG00000028019 #27	atxn2l (ENSXETG00000014990) #28	atp2a1 (ENSXETG00000009695) #25	ENSXETG00000043575 #26	ENSXETG00000048142 #26	ENSXETG00000045379	ppp1ca (ENSXETG00000043157)	tctn3 (ENSXETG00000009691)	ENSXETG00000042120 #22	ENSXETG00000041569	ENSXETG00000047118	ENSXETG00000037902	ENSXETG00000043298	ENSXETG00000041705	ENSXETG00000049012	ENSXETG00000046044	ENSXETG00000043370	ENSXETG00000045650	ENSXETG00000045494	ENSXETG00000041990	XB5829483 [provisional] (ENSXETG00000031609)	ENSXETG00000045853	ENSXETG00000023970	ENSXETG00000038919
Coelacanth	MODERN SPECIES	1461																RABEP2 (ENSLACG00000010684) #22	ATP2A1 (ENSLACG00000009802) #25	ENSLACG00000009041	ppp1caa (ENSLACG00000008556)	SH2B1 (ENSLACG00000007322) #26	ATXN2L (ENSLACG00000006023) #28	FUS (ENSLACG00000004570)	MAPK7 (ENSLACG00000003734)	ENSLACG00000002506
Actinopterygii	ANCESTRAL SPECIES	932																ENSGT00530000063743.a #22	ENSGT00940000164922
Neopterygii	ANCESTRAL SPECIES	718																ENSGT00530000063743.a #22	ENSGT00940000164922
Osteoglossocephalai	ANCESTRAL SPECIES	639															ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922
Clupeocephala	ANCESTRAL SPECIES	183	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000154308.A.a.a.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00390000007119 #21	ENSGT00390000005976.b #20	ENSGT00940000157795.g.b #28	ENSGT00950000183191.a.a.f #26	ENSGT00940000154813.e.a.b	ENSGT00940000161215	ENSGT00940000162096	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a
Euteleosteomorpha	ANCESTRAL SPECIES	369											ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a
Acanthomorphata	ANCESTRAL SPECIES	25															ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Anabantaria	ANCESTRAL SPECIES	6	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT00390000014178	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Climbing perch	MODERN SPECIES	21	znf598 (ENSATEG00000005281)	ENSATEG00000005275	ENSATEG00000005251	ENSATEG00000005090	jpt2 (ENSATEG00000029497)	mapk8ip3 (ENSATEG00000004980)	nme3 (ENSATEG00000026316)	mrps34 (ENSATEG00000004971)	spsb3a (ENSATEG00000029439)	ENSATEG00000004909	ypel3 (ENSATEG00000004884)	gdpd3a (ENSATEG00000004874)	mapk3 (ENSATEG00000004831)	nudt9 (ENSATEG00000004815)	ENSATEG00000004775	ENSATEG00000004673 #22	ENSATEG00000004550	ENSATEG00000004530	ENSATEG00000004481	xylt2 (ENSATEG00000004417)	ENSATEG00000004407	ENSATEG00000004392	ENSATEG00000004383	cdr2l (ENSATEG00000004372)	arhgdia (ENSATEG00000004336)	alyref (ENSATEG00000004307)	mcrip1 (ENSATEG00000027719)	ENSATEG00000028121	pecam1a (ENSATEG00000004261)	nptx1l (ENSATEG00000004235)	ENSATEG00000004184
Siamese fighting fish	MODERN SPECIES	19	znf598 (ENSBSLG00000004139)	tmem11 (ENSBSLG00000004163)	dhrs7b (ENSBSLG00000004172)	CRAMP1 (ENSBSLG00000004194)	jpt2 (ENSBSLG00000004263)	mapk8ip3 (ENSBSLG00000004279)	nme3 (ENSBSLG00000004506)	mrps34 (ENSBSLG00000004531)	spsb3a (ENSBSLG00000004535)	ATP6V0C (ENSBSLG00000004541)	ypel3 (ENSBSLG00000004544)	gdpd3a (ENSBSLG00000004547)	mapk3 (ENSBSLG00000004559)	nudt9 (ENSBSLG00000004681)	ENSBSLG00000004683	rabep2 (ENSBSLG00000004686) #22	atp2a1 (ENSBSLG00000004692)	ENSBSLG00000004705	ENSBSLG00000004709	xylt2 (ENSBSLG00000004710)	ENSBSLG00000004711	ENSBSLG00000004712	RECQL5 (ENSBSLG00000004713)	cdr2l (ENSBSLG00000004714)	arhgdia (ENSBSLG00000004715)	alyref (ENSBSLG00000004716)	ENSBSLG00000004717	mcrip1 (ENSBSLG00000004719)	PPP1R27 (ENSBSLG00000004795)	pecam1a (ENSBSLG00000004851)	nptx1l (ENSBSLG00000004899)
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000028516	TMEM11 (ENSMAMG00000002076)	ENSMAMG00000002088	ENSMAMG00000002123	jpt2 (ENSMAMG00000027505)	mapk8ip3 (ENSMAMG00000002307)	nme3 (ENSMAMG00000028290)	mrps34 (ENSMAMG00000002399)	spsb3a (ENSMAMG00000002407)	ENSMAMG00000025593	ypel3 (ENSMAMG00000002454)	gdpd3a (ENSMAMG00000002464)	mapk3 (ENSMAMG00000002487)	nudt9 (ENSMAMG00000002516)	ENSMAMG00000002536	rabep2 (ENSMAMG00000002587) #22	atp2a1 (ENSMAMG00000002646)	ENSMAMG00000002829	ENSMAMG00000002846	xylt2 (ENSMAMG00000002887)	ENSMAMG00000002935	ENSMAMG00000002948	cdr2l (ENSMAMG00000002976)	arhgdia (ENSMAMG00000024673)	alyref (ENSMAMG00000003034)	mcrip1 (ENSMAMG00000003070)	ENSMAMG00000003084	pecam1a (ENSMAMG00000003095)	nptx1l (ENSMAMG00000003112)	ENSMAMG00000003143	ENSMAMG00000003220
Carangaria	ANCESTRAL SPECIES	4	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Carangaria_A	ANCESTRAL SPECIES	12	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Seriola	ANCESTRAL SPECIES	57	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Yellowtail amberjack	MODERN SPECIES	2837							mrps34 (ENSSLDG00000017958)	spsb3a (ENSSLDG00000017977)	ENSSLDG00000018112	ATP6V0C (ENSSLDG00000019025)	ypel3 (ENSSLDG00000019040)	gdpd3a (ENSSLDG00000019062)	mapk3 (ENSSLDG00000019094)	nudt9 (ENSSLDG00000019125)	ENSSLDG00000019145	rabep2 (ENSSLDG00000019170) #22	atp2a1 (ENSSLDG00000019193)
Greater amberjack	MODERN SPECIES	89	dhrs7b (ENSSDUG00000016792)	CRAMP1 (ENSSDUG00000016689)	jpt2 (ENSSDUG00000016654)	mapk8ip3 (ENSSDUG00000016594)	nme3 (ENSSDUG00000016556)	mrps34 (ENSSDUG00000016535)	spsb3a (ENSSDUG00000016524)	ENSSDUG00000016521	ENSSDUG00000016513	ATP6V0C (ENSSDUG00000016511)	ypel3 (ENSSDUG00000016503)	gdpd3a (ENSSDUG00000016491)	mapk3 (ENSSDUG00000016464)	nudt9 (ENSSDUG00000016449)	ENSSDUG00000016411	rabep2 (ENSSDUG00000016382) #22	atp2a1 (ENSSDUG00000016334)	NHERF1 (ENSSDUG00000016320)	ENSSDUG00000016304	xylt2 (ENSSDUG00000016270)	ENSSDUG00000016256	ENSSDUG00000016220	cdr2l (ENSSDUG00000016199)	arhgdia (ENSSDUG00000016182)	ENSSDUG00000016175	alyref (ENSSDUG00000016158)	mcrip1 (ENSSDUG00000016138)	PPP1R27 (ENSSDUG00000016124)	pecam1a (ENSSDUG00000016098)	nptx1l (ENSSDUG00000016082)	ENSSDUG00000016038
Barramundi perch	MODERN SPECIES	41	KCNJ18 (ENSLCAG00010000586)	natd1 (ENSLCAG00010000613)	tmem11 (ENSLCAG00010000622)	dhrs7b (ENSLCAG00010000630)	jpt2 (ENSLCAG00010000641)	mapk8ip3 (ENSLCAG00010000759)	nme3 (ENSLCAG00010000887)	mrps34 (ENSLCAG00010000891)	spsb3a (ENSLCAG00010000900)	ATP6V0C (ENSLCAG00010000917)	ypel3 (ENSLCAG00010000937)	gdpd3a (ENSLCAG00010000941)	mapk3 (ENSLCAG00010000951)	nudt9 (ENSLCAG00010001013)	ENSLCAG00010001016	rabep2 (ENSLCAG00010001019) #22	atp2a1 (ENSLCAG00010001191)	NHERF1 (ENSLCAG00010001599)	ENSLCAG00010001604	xylt2 (ENSLCAG00010001610)	ENSLCAG00010001622	RECQL5 (ENSLCAG00010001627)	cdr2l (ENSLCAG00010001631)	arhgdia (ENSLCAG00010001634)	alyref (ENSLCAG00010001639)	mcrip1 (ENSLCAG00010001643)	PPP1R27 (ENSLCAG00010001646)	pecam1a (ENSLCAG00010001649)	nptx1l (ENSLCAG00010001653)	ENSLCAG00010001657	MGAT5B (ENSLCAG00010001667)
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Tongue sole	MODERN SPECIES	8	ENSCSEG00000017447	PLEKHH3 (ENSCSEG00000017461)	ENSCSEG00000017471	tubg1 (ENSCSEG00000017484)	ENSCSEG00000017509	psmc3ip (ENSCSEG00000017568)	nme3 (ENSCSEG00000017572)	mrps34 (ENSCSEG00000017581)	spsb3a (ENSCSEG00000017585)	ATP6V0C (ENSCSEG00000017596)	ypel3 (ENSCSEG00000017602)	gdpd3a (ENSCSEG00000017611)	mapk3 (ENSCSEG00000017634)	nudt9 (ENSCSEG00000017656)	ENSCSEG00000017661	rabep2 (ENSCSEG00000017675) #22	atp2a1 (ENSCSEG00000017690)	NHERF1 (ENSCSEG00000017713)	ENSCSEG00000017725	xylt2 (ENSCSEG00000017735)	ENSCSEG00000017747	RECQL5 (ENSCSEG00000017761)	cdr2l (ENSCSEG00000017776)	arhgdia (ENSCSEG00000017784)	alyref (ENSCSEG00000017800)	mcrip1 (ENSCSEG00000017807)	PPP1R27 (ENSCSEG00000017809)	pecam1a (ENSCSEG00000017822)	nptx1l (ENSCSEG00000017863)	sec14l1 (ENSCSEG00000017874)	MGAT5B (ENSCSEG00000017891)
Turbot	MODERN SPECIES	10	ENSSMAG00000027605	tmem11 (ENSSMAG00000034921)	ENSSMAG00000009989	ENSSMAG00000009909	jpt2 (ENSSMAG00000032371)	mapk8ip3 (ENSSMAG00000009876)	nme3 (ENSSMAG00000009839)	mrps34 (ENSSMAG00000009866)	spsb3a (ENSSMAG00000033531)	ENSSMAG00000009799	ypel3 (ENSSMAG00000009762)	gdpd3a (ENSSMAG00000009758)	mapk3 (ENSSMAG00000009704)	nudt9 (ENSSMAG00000009681)	ENSSMAG00000009651	ENSSMAG00000009586 #22	ENSSMAG00000009500	ENSSMAG00000009491	ENSSMAG00000028106	xylt2 (ENSSMAG00000009415)	ENSSMAG00000009402	ENSSMAG00000009346	cdr2l (ENSSMAG00000009337)	arhgdia (ENSSMAG00000009310)	ENSSMAG00000009276	alyref (ENSSMAG00000009283)	mcrip1 (ENSSMAG00000027860)	ENSSMAG00000025890	pecam1a (ENSSMAG00000009221)	nptx1l (ENSSMAG00000009209)	ENSSMAG00000009175
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Tetraodontidae	ANCESTRAL SPECIES	8			ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b	ENSGT00940000163566.a.b.a.b
Tetraodon	MODERN SPECIES	26	znf598 (ENSTNIG00000002658)	slc25a17 (ENSTNIG00000002659)	rpusd1 (ENSTNIG00000002660)	dhrs7b (ENSTNIG00000002661)	CRAMP1 (ENSTNIG00000002662)	jpt2 (ENSTNIG00000005456)	mapk8ip3 (ENSTNIG00000011577)	nme3 (ENSTNIG00000011578)	mrps34 (ENSTNIG00000011579)	spsb3a (ENSTNIG00000011580)	ATP6V0C (ENSTNIG00000011581)	ypel3 (ENSTNIG00000002428)	gdpd3a (ENSTNIG00000011582)	mapk3 (ENSTNIG00000011583)	nudt9 (ENSTNIG00000011584)	rabep2 (ENSTNIG00000011585) #22	atp2a1 (ENSTNIG00000011586)	NHERF1 (ENSTNIG00000011587)	ENSTNIG00000011588	ENSTNIG00000011589	xylt2 (ENSTNIG00000011590)	ENSTNIG00000011591	RECQL5 (ENSTNIG00000011592)	cdr2l (ENSTNIG00000011593)	arhgdia (ENSTNIG00000011594)	alyref (ENSTNIG00000011595)	PPP1R27 (ENSTNIG00000001681)	pecam1a (ENSTNIG00000011596)	nptx1l (ENSTNIG00000017504)	ENSTNIG00000011597	MGAT5B (ENSTNIG00000011598)
Fugu	MODERN SPECIES	17	rpusd1 (ENSTRUG00000003041)	ENSTRUG00000019795	dhrs7b (ENSTRUG00000020892)	CRAMP1 (ENSTRUG00000003674)	jpt2 (ENSTRUG00000003866)	mapk8ip3 (ENSTRUG00000004041)	nme3 (ENSTRUG00000023495)	mrps34 (ENSTRUG00000005029)	spsb3a (ENSTRUG00000005089)	ATP6V0C (ENSTRUG00000014516)	ypel3 (ENSTRUG00000024120)	gdpd3a (ENSTRUG00000005467)	mapk3 (ENSTRUG00000005697)	nudt9 (ENSTRUG00000006123)	ENSTRUG00000020291	rabep2 (ENSTRUG00000019792) #22	atp2a1 (ENSTRUG00000006271)	NHERF1 (ENSTRUG00000007970)	xylt2 (ENSTRUG00000008009)	ENSTRUG00000019981	RECQL5 (ENSTRUG00000008246)	cdr2l (ENSTRUG00000029310)	arhgdia (ENSTRUG00000008537)	ALYREF (ENSTRUG00000008828)	ENSTRUG00000032260	mcrip1 (ENSTRUG00000027804)	PPP1R27 (ENSTRUG00000008938)	pecam1a (ENSTRUG00000008955)	nptx1l (ENSTRUG00000012694)	ENSTRUG00000012507	MGAT5B (ENSTRUG00000012297)
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Ballan wrasse	MODERN SPECIES	483	ENSLBEG00000023816	tmem11 (ENSLBEG00000023827)	dhrs7b (ENSLBEG00000023840)	CRAMP1 (ENSLBEG00000023879)	jpt2 (ENSLBEG00000023929)	mapk8ip3 (ENSLBEG00000024197)	nme3 (ENSLBEG00000024609)	mrps34 (ENSLBEG00000024632)	spsb3a (ENSLBEG00000024655)	ATP6V0C (ENSLBEG00000024682)	ypel3 (ENSLBEG00000024696)	gdpd3a (ENSLBEG00000024734)	mapk3 (ENSLBEG00000024780)	nudt9 (ENSLBEG00000024813)	ENSLBEG00000024828	rabep2 (ENSLBEG00000024873) #22	atp2a1 (ENSLBEG00000024948)
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Perciformes	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Cottioidei	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b	ENSGT00940000163566.a.b.a.b
Lumpfish	MODERN SPECIES	23	natd1 (ENSCLMG00005006801)	tmem11 (ENSCLMG00005006784)	dhrs7b (ENSCLMG00005006783)	CRAMP1 (ENSCLMG00005006714)	jpt2 (ENSCLMG00005006712)	mapk8ip3 (ENSCLMG00005006709)	nme3 (ENSCLMG00005006608)	mrps34 (ENSCLMG00005006605)	spsb3a (ENSCLMG00005006602)	ATP6V0C (ENSCLMG00005006585)	ypel3 (ENSCLMG00005006583)	gdpd3a (ENSCLMG00005006581)	mapk3 (ENSCLMG00005005860)	nudt9 (ENSCLMG00005005844)	ENSCLMG00005005842	rabep2 (ENSCLMG00005005831) #22	atp2a1 (ENSCLMG00005005812)	NHERF1 (ENSCLMG00005005810)	ENSCLMG00005005809	ENSCLMG00005005807	xylt2 (ENSCLMG00005005805)	ENSCLMG00005005803	RECQL5 (ENSCLMG00005005799)	cdr2l (ENSCLMG00005005797)	arhgdia (ENSCLMG00005005795)	ALYREF (ENSCLMG00005005776)	mcrip1 (ENSCLMG00005005771)	PPP1R27 (ENSCLMG00005005768)	pecam1a (ENSCLMG00005005765)	nptx1l (ENSCLMG00005005764)	SEC14L1 (ENSCLMG00005005635)
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Pike perch	MODERN SPECIES	38	tmem11 (ENSSLUG00000003892)	dhrs7b (ENSSLUG00000003889)	CRAMP1 (ENSSLUG00000003881)	jpt2 (ENSSLUG00000003867)	mapk8ip3 (ENSSLUG00000003797)	nme3 (ENSSLUG00000003715)	mrps34 (ENSSLUG00000003705)	spsb3a (ENSSLUG00000003685)	ATP6V0C (ENSSLUG00000003659)	ENSSLUG00000003652	ypel3 (ENSSLUG00000003644)	gdpd3a (ENSSLUG00000003635)	mapk3 (ENSSLUG00000003484)	nudt9 (ENSSLUG00000003415)	ENSSLUG00000003385	rabep2 (ENSSLUG00000003315) #22	atp2a1 (ENSSLUG00000002201)	NHERF1 (ENSSLUG00000002056)	ENSSLUG00000002047	xylt2 (ENSSLUG00000001870)	ENSSLUG00000001821	RECQL5 (ENSSLUG00000001778)	cdr2l (ENSSLUG00000001743)	arhgdia (ENSSLUG00000001730)	ENSSLUG00000001723	alyref (ENSSLUG00000001718)	mcrip1 (ENSSLUG00000001709)	PPP1R27 (ENSSLUG00000001704)	pecam1a (ENSSLUG00000001684)	nptx1l (ENSSLUG00000001663)	sec14l1 (ENSSLUG00000001625)
Channel bull blenny	MODERN SPECIES	22	natd1 (ENSCGOG00000009173)	tmem11 (ENSCGOG00000009177)	dhrs7b (ENSCGOG00000009179)	CRAMP1 (ENSCGOG00000009185)	jpt2 (ENSCGOG00000009198)	mapk8ip3 (ENSCGOG00000009319)	nme3 (ENSCGOG00000012868)	mrps34 (ENSCGOG00000012876)	spsb3a (ENSCGOG00000012893)	ATP6V0C (ENSCGOG00000012922)	ypel3 (ENSCGOG00000012998)	gdpd3a (ENSCGOG00000013024)	mapk3 (ENSCGOG00000013077)	nudt9 (ENSCGOG00000014380)	ENSCGOG00000014398	rabep2 (ENSCGOG00000014429) #22	atp2a1 (ENSCGOG00000014471)	NHERF1 (ENSCGOG00000014780)	ENSCGOG00000014820	xylt2 (ENSCGOG00000014843)	ENSCGOG00000015132	RECQL5 (ENSCGOG00000015136)	ENSCGOG00000015149	cdr2l (ENSCGOG00000015153)	arhgdia (ENSCGOG00000015160)	alyref (ENSCGOG00000015171)	mcrip1 (ENSCGOG00000015189)	PPP1R27 (ENSCGOG00000015191)	pecam1a (ENSCGOG00000015195)	nptx1l (ENSCGOG00000015206)	sec14l1 (ENSCGOG00000015228)
Eupecaria_C	ANCESTRAL SPECIES	17	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	15	tmem11 (ENSSAUG00010012307)	dhrs7b (ENSSAUG00010012305)	CRAMP1 (ENSSAUG00010012296)	jpt2 (ENSSAUG00010012292)	mapk8ip3 (ENSSAUG00010005892)	nme3 (ENSSAUG00010005774)	mrps34 (ENSSAUG00010005772)	spsb3a (ENSSAUG00010005769)	ATP6V0C (ENSSAUG00010005767)	ypel3 (ENSSAUG00010005764)	gdpd3a (ENSSAUG00010005763)	mapk3 (ENSSAUG00010003878)	nudt9 (ENSSAUG00010003828)	ENSSAUG00010003812	rabep2 (ENSSAUG00010003807) #22	rabep2 (ENSSAUG00010003669) #22	atp2a1 (ENSSAUG00010002949)	NHERF1 (ENSSAUG00010002839)	ENSSAUG00010002818	xylt2 (ENSSAUG00010025955)	ENSSAUG00010025946	RECQL5 (ENSSAUG00010025939)	cdr2l (ENSSAUG00010025938)	arhgdia (ENSSAUG00010025937)	ENSSAUG00010025936	ALYREF (ENSSAUG00010025934)	mcrip1 (ENSSAUG00010025932)	PPP1R27 (ENSSAUG00010025931)	pecam1a (ENSSAUG00010025929)	ENSSAUG00010025927	ENSSAUG00010025926
Gilthead seabream	MODERN SPECIES	15	natd1 (ENSSAUG00010012309)	tmem11 (ENSSAUG00010012307)	dhrs7b (ENSSAUG00010012305)	CRAMP1 (ENSSAUG00010012296)	jpt2 (ENSSAUG00010012292)	mapk8ip3 (ENSSAUG00010005892)	nme3 (ENSSAUG00010005774)	mrps34 (ENSSAUG00010005772)	spsb3a (ENSSAUG00010005769)	ATP6V0C (ENSSAUG00010005767)	ypel3 (ENSSAUG00010005764)	gdpd3a (ENSSAUG00010005763)	mapk3 (ENSSAUG00010003878)	nudt9 (ENSSAUG00010003828)	ENSSAUG00010003812	rabep2 (ENSSAUG00010003807) #22	rabep2 (ENSSAUG00010003669) #22	atp2a1 (ENSSAUG00010002949)	NHERF1 (ENSSAUG00010002839)	ENSSAUG00010002818	xylt2 (ENSSAUG00010025955)	ENSSAUG00010025946	RECQL5 (ENSSAUG00010025939)	cdr2l (ENSSAUG00010025938)	arhgdia (ENSSAUG00010025937)	ENSSAUG00010025936	ALYREF (ENSSAUG00010025934)	mcrip1 (ENSSAUG00010025932)	PPP1R27 (ENSSAUG00010025931)	pecam1a (ENSSAUG00010025929)	ENSSAUG00010025927
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	35	ENSGT00940000155286.m.b	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
European seabass	MODERN SPECIES	21	ENSDLAG00005033708	ENSDLAG00005026864	NATD1 (ENSDLAG00005035103)	TMEM11 (ENSDLAG00005029286)	ENSDLAG00005023548	ENSDLAG00005023553	mapk8ip3 (ENSDLAG00005023641)	nme3 (ENSDLAG00005024910)	spsb3a (ENSDLAG00005024914)	ENSDLAG00005024922	ypel3 (ENSDLAG00005032337)	gdpd3a (ENSDLAG00005027202)	mapk3 (ENSDLAG00005024940)	nudt9 (ENSDLAG00005032301)	ENSDLAG00005025104	ENSDLAG00005025109 #22	ENSDLAG00005025196	ENSDLAG00005032996	ENSDLAG00005029131	xylt2 (ENSDLAG00005025732)	ENSDLAG00005025748	cdr2l (ENSDLAG00005033786)	arhgdia (ENSDLAG00005025751)	alyref (ENSDLAG00005032798)	ENSDLAG00005034354	ENSDLAG00005033447	pecam1a (ENSDLAG00005025763)	nptx1l (ENSDLAG00005032141)	ENSDLAG00005025767	ENSDLAG00005025777	ENSDLAG00005032873
Large yellow croaker	MODERN SPECIES	483	ENSLCRG00005007365	desi1a (ENSLCRG00005007362)	flii (ENSLCRG00005006602)	LLGL1 (ENSLCRG00005004456)	MYO15A (ENSLCRG00005004381)	ENSLCRG00005004363	ENSLCRG00005004312	mrps34 (ENSLCRG00005004311)	spsb3a (ENSLCRG00005004310)	ATP6V0C (ENSLCRG00005004307)	ypel3 (ENSLCRG00005004305)	gdpd3a (ENSLCRG00005004303)	mapk3 (ENSLCRG00005003003)	nudt9 (ENSLCRG00005002965)	ENSLCRG00005002950	rabep2 (ENSLCRG00005002942) #22	atp2a1 (ENSLCRG00005002909)	NHERF1 (ENSLCRG00005002900)	ENSLCRG00005002897	xylt2 (ENSLCRG00005002677)	ENSLCRG00005002666	RECQL5 (ENSLCRG00005002647)	cdr2l (ENSLCRG00005002634)	arhgdia (ENSLCRG00005002625)	alyref (ENSLCRG00005002622)	mcrip1 (ENSLCRG00005002615)	PPP1R27 (ENSLCRG00005002610)	pecam1a (ENSLCRG00005002605)	nptx1l (ENSLCRG00005002598)	sec14l1 (ENSLCRG00005002564)	MGAT5B (ENSLCRG00005014528)
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d
Atherinomorphae	ANCESTRAL SPECIES	6	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Aplocheiloidei	ANCESTRAL SPECIES	53	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Mangrove rivulus	MODERN SPECIES	108	natd1 (ENSKMAG00000009735)	tmem11 (ENSKMAG00000009728)	dhrs7b (ENSKMAG00000009685)	CRAMP1 (ENSKMAG00000009624)	jpt2 (ENSKMAG00000009589)	mapk8ip3 (ENSKMAG00000009552)	nme3 (ENSKMAG00000009532)	mrps34 (ENSKMAG00000009519)	spsb3a (ENSKMAG00000009491)	ATP6V0C (ENSKMAG00000009477)	ypel3 (ENSKMAG00000009444)	gdpd3a (ENSKMAG00000009427)	mapk3 (ENSKMAG00000009381)	nudt9 (ENSKMAG00000009349)	ENSKMAG00000009327	rabep2 (ENSKMAG00000009303) #22	atp2a1 (ENSKMAG00000009150)	NHERF1 (ENSKMAG00000009111)	ENSKMAG00000009095	xylt2 (ENSKMAG00000009043)	ENSKMAG00000009013	ENSKMAG00000008993	cdr2l (ENSKMAG00000008961)	arhgdia (ENSKMAG00000008937)	alyref (ENSKMAG00000008912)	mcrip1 (ENSKMAG00000008894)	PPP1R27 (ENSKMAG00000008883)	pecam1a (ENSKMAG00000008836)	nptx1l (ENSKMAG00000008798)	sec14l1 (ENSKMAG00000008735)	MGAT5B (ENSKMAG00000008665)
Turquoise killifish	MODERN SPECIES	1612	ENSNFUG00015001745	DHRS7B (ENSNFUG00015001741)	CRAMP1 (ENSNFUG00015001739)	HN1L (ENSNFUG00015001732)	mapk8ip3 (ENSNFUG00015001690)	NME3 (ENSNFUG00015001586)	MRPS34 (ENSNFUG00015001543)	SPSB3A (ENSNFUG00015001538)	ATP6V0C (ENSNFUG00015001526)	YPEL3 (ENSNFUG00015001516)	gdpd3a (ENSNFUG00015001469)	MAPK3 (ENSNFUG00015001405)	NUDT9 (ENSNFUG00015001381)	SI (ENSNFUG00015001351)	ENSNFUG00015001338	rabep2 (ENSNFUG00015001317) #22	atp2a1 (ENSNFUG00015000775)	NHERF1 (ENSNFUG00015000490)	CABZ01066957.1 (ENSNFUG00015000305)	XYLT2 (ENSNFUG00015000108)	cfap53 (ENSNFUG00015000068)	CR352258.1 (ENSNFUG00015019375)	ENSNFUG00015019371	alyref (ENSNFUG00015019366)	FAM195B (ENSNFUG00015019364)	PPP1R27 (ENSNFUG00015019358)	pecam1a (ENSNFUG00015019354)	ENSNFUG00015019353	NPTX1L (ENSNFUG00015019351)	sec14l1 (ENSNFUG00015019256)	MGAT5B (ENSNFUG00015019030)
Cyprinodontoidei	ANCESTRAL SPECIES	22	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Poecilia	ANCESTRAL SPECIES	18	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
NAME_6	ANCESTRAL SPECIES	66	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00530000066520	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b.g	ENSGT00390000018570.b.b.h	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d
Sailfin molly	MODERN SPECIES	891	natd1 (ENSPLAG00000018045)	tmem11 (ENSPLAG00000018053)	dhrs7b (ENSPLAG00000018084)	CRAMP1 (ENSPLAG00000018143)	jpt2 (ENSPLAG00000018162)	mapk8ip3 (ENSPLAG00000018259)	mrps34 (ENSPLAG00000018270)	nme3 (ENSPLAG00000019539)	spsb3a (ENSPLAG00000019620)	ATP6V0C (ENSPLAG00000019629)	ypel3 (ENSPLAG00000019643)	gdpd3a (ENSPLAG00000019727)	mapk3 (ENSPLAG00000019751)	nudt9 (ENSPLAG00000019757)	ENSPLAG00000019794	rabep2 (ENSPLAG00000019838) #22	atp2a1 (ENSPLAG00000019897)	NHERF1 (ENSPLAG00000019907)	ENSPLAG00000019912	xylt2 (ENSPLAG00000000442)	ENSPLAG00000019956	ENSPLAG00000019969	cdr2l (ENSPLAG00000019978)	arhgdia (ENSPLAG00000019998)
Amazon molly	MODERN SPECIES	596							NME3 (ENSPFOG00000008459)	mrps34 (ENSPFOG00000008434)	spsb3a (ENSPFOG00000008386)	ATP6V0C (ENSPFOG00000008362)	ypel3 (ENSPFOG00000022327)	gdpd3a (ENSPFOG00000008288)	mapk3 (ENSPFOG00000008154)	nudt9 (ENSPFOG00000008083)	ENSPFOG00000007976	rabep2 (ENSPFOG00000007894) #22	atp2a1 (ENSPFOG00000007092)	NHERF1 (ENSPFOG00000006957)	ENSPFOG00000024467	xylt2 (ENSPFOG00000006722)	ENSPFOG00000006682	ENSPFOG00000006613	ENSPFOG00000006282	cdr2l (ENSPFOG00000006187)	arhgdia (ENSPFOG00000006151)	cdr2l (ENSPFOG00000022961)	arhgdia (ENSPFOG00000006085)	alyref (ENSPFOG00000022825)	mcrip1 (ENSPFOG00000006074)	PPP1R27 (ENSPFOG00000006053)	ENSPFOG00000005947
Guppy	MODERN SPECIES	460	natd1 (ENSPREG00000013951)	tmem11 (ENSPREG00000013969)	dhrs7b (ENSPREG00000013978)	CRAMP1 (ENSPREG00000014002)	jpt2 (ENSPREG00000014084)	mapk8ip3 (ENSPREG00000014230)	nme3 (ENSPREG00000014544)	mrps34 (ENSPREG00000015105)	spsb3a (ENSPREG00000015146)	ATP6V0C (ENSPREG00000015166)	ypel3 (ENSPREG00000015178)	gdpd3a (ENSPREG00000015195)	mapk3 (ENSPREG00000015248)	nudt9 (ENSPREG00000015271)	ENSPREG00000015319	rabep2 (ENSPREG00000015356) #22	atp2a1 (ENSPREG00000015392)	NHERF1 (ENSPREG00000015509)	ENSPREG00000015539	xylt2 (ENSPREG00000015639)	ENSPREG00000015709	ENSPREG00000015737	cdr2l (ENSPREG00000015768)	arhgdia (ENSPREG00000015778)	alyref (ENSPREG00000015795)	ENSPREG00000015817	ENSPREG00000015828	PPP1R27 (ENSPREG00000015843)	pecam1a (ENSPREG00000015850)	nptx1l (ENSPREG00000015873)	ENSPREG00000015908
Platyfish	MODERN SPECIES	7	natd1 (ENSXMAG00000028964)	tmem11 (ENSXMAG00000011861)	dhrs7b (ENSXMAG00000011863)	CRAMP1 (ENSXMAG00000011872)	jpt2 (ENSXMAG00000011884)	mapk8ip3 (ENSXMAG00000011891)	nme3 (ENSXMAG00000011927)	mrps34 (ENSXMAG00000011943)	spsb3a (ENSXMAG00000020991)	ATP6V0C (ENSXMAG00000023815)	ypel3 (ENSXMAG00000027984)	gdpd3a (ENSXMAG00000011975)	mapk3 (ENSXMAG00000024764)	nudt9 (ENSXMAG00000012034)	ENSXMAG00000021235	rabep2 (ENSXMAG00000012046) #22	atp2a1 (ENSXMAG00000012051)	NHERF1 (ENSXMAG00000012101)	ENSXMAG00000022771	xylt2 (ENSXMAG00000012122)	ENSXMAG00000012130	ENSXMAG00000012133	cdr2l (ENSXMAG00000012181)	ENSXMAG00000029008	arhgdia (ENSXMAG00000012202)	alyref (ENSXMAG00000012218)	ENSXMAG00000027900	ENSXMAG00000012233	PPP1R27 (ENSXMAG00000012234)	pecam1a (ENSXMAG00000012237)	ENSXMAG00000028613
NAME_4	ANCESTRAL SPECIES	88	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Sheepshead minnow	MODERN SPECIES	296																rabep2 (ENSCVAG00000015113) #22	atp2a1 (ENSCVAG00000015070)	NHERF1 (ENSCVAG00000015002)	ENSCVAG00000014996	xylt2 (ENSCVAG00000014978)	ENSCVAG00000014946	ENSCVAG00000014937	cdr2l (ENSCVAG00000014918)	arhgdia (ENSCVAG00000014899)	alyref (ENSCVAG00000014869)	mcrip1 (ENSCVAG00000014844)	PPP1R27 (ENSCVAG00000014830)	pecam1a (ENSCVAG00000000377)	nptx1l (ENSCVAG00000014811)	sec14l1 (ENSCVAG00000014796)	ints2 (ENSCVAG00000014735)
Mummichog	MODERN SPECIES	2491	ENSFHEG00000020598	natd1 (ENSFHEG00000020579)	dhrs7b (ENSFHEG00000020571)	CRAMP1 (ENSFHEG00000020520)	jpt2 (ENSFHEG00000020500)	mapk8ip3 (ENSFHEG00000020471)	nme3 (ENSFHEG00000019990)	mrps34 (ENSFHEG00000019970)	spsb3a (ENSFHEG00000019967)	ATP6V0C (ENSFHEG00000019941)	ypel3 (ENSFHEG00000019925)	gdpd3a (ENSFHEG00000019900)	mapk3 (ENSFHEG00000019871)	nudt9 (ENSFHEG00000019827)	ENSFHEG00000019820	rabep2 (ENSFHEG00000019761) #22	atp2a1 (ENSFHEG00000019714)	NHERF1 (ENSFHEG00000019549)	ENSFHEG00000019543	xylt2 (ENSFHEG00000019532)	ENSFHEG00000019494	RECQL5 (ENSFHEG00000019476)	cdr2l (ENSFHEG00000019464)	arhgdia (ENSFHEG00000019454)	alyref (ENSFHEG00000019426)	mcrip1 (ENSFHEG00000019403)	ENSFHEG00000019379	pecam1a (ENSFHEG00000019368)
Oryzias	ANCESTRAL SPECIES		ENSGT01100000263566.b.b.b.a.a.b.b.a.a.a.b.a.b	ENSGT00940000163849.i.a.a.a.b.s.a	ENSGT01100000263566.b.b.b.a.a.b.b.a.a.a.b.b	ENSGT01020000230358.h.d.b.b.g.b.a.b.b.a.b.a.a	ENSGT01100000263566.b.b.b.a.a.b.b.a.b.b	ENSGT01020000230358.h.d.b.b.g.b.a.b.b.b	ENSGT01100000263566.b.b.b.a.a.a	ENSGT01020000230358.h.d.b.a.d	ENSGT00940000163371.b.ab	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Oryzias_b	ANCESTRAL SPECIES	30	ENSGT01020000230358.h.d.b.b.g.b.a.b.b.a.a.d.a.a	ENSGT01090000259993.B.c.b.a.a.a.a.a.a	ENSGT01020000230358.h.d.b.b.g.b.a.b.b.a.a.d.a.b.a	ENSGT01100000263566.b.b.b.a.a.b.b.a.a.a.b.a.a.a.b.a.a	ENSGT01100000263566.b.b.b.a.a.a.d.b	ENSGT01020000230358.h.d.b.b.g.b.a.b.b.a.a.c.b.b.b	ENSGT01100000263566.b.b.b.a.a.a.d.a	ENSGT01020000230358.h.d.b.a.d	ENSGT00940000163371.b.ab	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Indian medaka	MODERN SPECIES	9	ENSOMEG00000017873	ENSOMEG00000000447	ENSOMEG00000017879	ENSOMEG00000017884	ENSOMEG00000017922	ENSOMEG00000017989	ENSOMEG00000018269	ENSOMEG00000018399	ENSOMEG00000018442	atp6v0ca (ENSOMEG00000018449)	ypel3 (ENSOMEG00000018490)	gdpd3a (ENSOMEG00000018540)	mapk3 (ENSOMEG00000018584)	nudt9 (ENSOMEG00000018622)	ENSOMEG00000018686	rabep2 (ENSOMEG00000018710) #22	atp2a1 (ENSOMEG00000018868)	NHERF1 (ENSOMEG00000018901)	ENSOMEG00000018938	xylt2 (ENSOMEG00000018991)	ENSOMEG00000019026	ENSOMEG00000019069	cdr2l (ENSOMEG00000019090)	arhgdia (ENSOMEG00000019120)	ENSOMEG00000019135	alyref (ENSOMEG00000019176)	mcrip1 (ENSOMEG00000019196)	ENSOMEG00000019209	pecam1a (ENSOMEG00000019262)	nptx1l (ENSOMEG00000019301)	sec14l1 (ENSOMEG00000019397)
Javanese ricefish	MODERN SPECIES	22	ENSOJAG00000007279	ENSOJAG00000007251	ENSOJAG00000007225	ENSOJAG00000007207	ENSOJAG00000007155	ENSOJAG00000007105	ENSOJAG00000007088	ENSOJAG00000007043	ENSOJAG00000007003	ATP6V0C (ENSOJAG00000006942)	ypel3 (ENSOJAG00000006916)	gdpd3a (ENSOJAG00000006893)	mapk3 (ENSOJAG00000006809)	nudt9 (ENSOJAG00000006795)	ENSOJAG00000006759	rabep2 (ENSOJAG00000006741) #22	atp2a1 (ENSOJAG00000004349)	NHERF1 (ENSOJAG00000003891)	ENSOJAG00000003830	xylt2 (ENSOJAG00000003484)	ENSOJAG00000003470	cdr2l (ENSOJAG00000003438)	arhgdia (ENSOJAG00000003425)	ENSOJAG00000003411	alyref (ENSOJAG00000003401)	mcrip1 (ENSOJAG00000003387)	ENSOJAG00000003377	ENSOJAG00000003348	nptx1l (ENSOJAG00000003334)	ENSOJAG00000003239	MGAT5B (ENSOJAG00000003140)
Oryzias_a	ANCESTRAL SPECIES	20										ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000022501	ENSORLG00000022799	ENSORLG00000024108	ENSORLG00000022287	ENSORLG00000029160	ENSORLG00000022540	ENSORLG00000024251	ENSORLG00000026360	ENSORLG00000024396	ATP6V0C (ENSORLG00000011910)	ypel3 (ENSORLG00000011915)	gdpd3a (ENSORLG00000011954)	mapk3 (ENSORLG00000011993)	nudt9 (ENSORLG00000012004)	ENSORLG00000012015	rabep2 (ENSORLG00000012024) #22	atp2a1 (ENSORLG00000012163)	ENSORLG00000028216	ENSORLG00000012199	xylt2 (ENSORLG00000012244)	ENSORLG00000012256	ENSORLG00000012294	cdr2l (ENSORLG00000025610)	arhgdia (ENSORLG00000012323)	ALYREF (ENSORLG00000012331)	ENSORLG00000026846	mcrip1 (ENSORLG00000012338)	ENSORLG00000012345	pecam1a (ENSORLG00000012356)	nptx1l (ENSORLG00000012368)	ENSORLG00000025843
Chinese medaka	MODERN SPECIES	402										ATP6V0C (ENSOSIG00000017124)	ypel3 (ENSOSIG00000017125)	gdpd3a (ENSOSIG00000017127)	mapk3 (ENSOSIG00000017138)	nudt9 (ENSOSIG00000017460)	ENSOSIG00000017476	rabep2 (ENSOSIG00000017576) #22	atp2a1 (ENSOSIG00000017592)	NHERF1 (ENSOSIG00000017633)	ENSOSIG00000017636	xylt2 (ENSOSIG00000017661)	ENSOSIG00000017798	RECQL5 (ENSOSIG00000017805)	cdr2l (ENSOSIG00000017808)	arhgdia (ENSOSIG00000017812)	ALYREF (ENSOSIG00000017821)	ENSOSIG00000017830	mcrip1 (ENSOSIG00000017835)	PPP1R27 (ENSOSIG00000017837)	pecam1a (ENSOSIG00000017844)	ENSOSIG00000017847
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a
Cichlidae	ANCESTRAL SPECIES	19	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	36	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00940000177165	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Haplochromini	ANCESTRAL SPECIES	37	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Burton s mouthbrooder	MODERN SPECIES	565			dhrs7b (ENSHBUG00000021388)	CRAMP1 (ENSHBUG00000021335)	jpt2 (ENSHBUG00000021229)	mapk8ip3 (ENSHBUG00000021187)	nme3 (ENSHBUG00000020775)	mrps34 (ENSHBUG00000020755)	spsb3a (ENSHBUG00000020737)	ATP6V0C (ENSHBUG00000020715)	ypel3 (ENSHBUG00000020708)	gdpd3a (ENSHBUG00000020700)	mapk3 (ENSHBUG00000020688)	nudt9 (ENSHBUG00000020648)	ENSHBUG00000020638	rabep2 (ENSHBUG00000020603) #22	atp2a1 (ENSHBUG00000020557)	NHERF1 (ENSHBUG00000020464)	ENSHBUG00000020452	xylt2 (ENSHBUG00000020384)	ENSHBUG00000020342	RECQL5 (ENSHBUG00000020297)	cdr2l (ENSHBUG00000000616)	arhgdia (ENSHBUG00000020223)	alyref (ENSHBUG00000020196)	mcrip1 (ENSHBUG00000020173)	PPP1R27 (ENSHBUG00000000609)	pecam1a (ENSHBUG00000020139)	nptx1l (ENSHBUG00000020123)	sec14l1 (ENSHBUG00000020094)	ENSHBUG00000019978
Haplochromini_A	ANCESTRAL SPECIES	37	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
P. nyererei	MODERN SPECIES	556			dhrs7b (ENSPNYG00000016716)	CRAMP1 (ENSPNYG00000016751)	jpt2 (ENSPNYG00000016790)	mapk8ip3 (ENSPNYG00000016808)	nme3 (ENSPNYG00000016887)	mrps34 (ENSPNYG00000016920)	spsb3a (ENSPNYG00000016936)	ATP6V0C (ENSPNYG00000016960)	ypel3 (ENSPNYG00000016971)	gdpd3a (ENSPNYG00000016991)	mapk3 (ENSPNYG00000017030)	nudt9 (ENSPNYG00000017075)	ENSPNYG00000017099	rabep2 (ENSPNYG00000017160) #22	atp2a1 (ENSPNYG00000017239)	NHERF1 (ENSPNYG00000017295)	ENSPNYG00000017308	xylt2 (ENSPNYG00000017326)	ENSPNYG00000017361	RECQL5 (ENSPNYG00000017402)	cdr2l (ENSPNYG00000017438)	arhgdia (ENSPNYG00000017481)	alyref (ENSPNYG00000017498)	mcrip1 (ENSPNYG00000017520)	PPP1R27 (ENSPNYG00000017534)	pecam1a (ENSPNYG00000017547)	ENSPNYG00000017562	nptx1l (ENSPNYG00000017582)	sec14l1 (ENSPNYG00000017621)
Haplochromini_B	ANCESTRAL SPECIES	41	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b	ENSGT00940000153470.a.b.b.m.b
Eastern happy	MODERN SPECIES	16	tmem11 (ENSACLG00000007446)	ENSACLG00000007455	dhrs7b (ENSACLG00000007460)	CRAMP1 (ENSACLG00000007480)	jpt2 (ENSACLG00000007520)	mapk8ip3 (ENSACLG00000007535)	nme3 (ENSACLG00000007786)	mrps34 (ENSACLG00000007811)	spsb3a (ENSACLG00000007819)	ATP6V0C (ENSACLG00000007834)	ypel3 (ENSACLG00000007835)	gdpd3a (ENSACLG00000007846)	mapk3 (ENSACLG00000007887)	nudt9 (ENSACLG00000007902)	ENSACLG00000007907	rabep2 (ENSACLG00000007938) #22	atp2a1 (ENSACLG00000007975)	NHERF1 (ENSACLG00000008018)	ENSACLG00000008021	xylt2 (ENSACLG00000008030)	ENSACLG00000008042	RECQL5 (ENSACLG00000008356)	cdr2l (ENSACLG00000008387)	arhgdia (ENSACLG00000008406)	alyref (ENSACLG00000008432)	mcrip1 (ENSACLG00000008440)	PPP1R27 (ENSACLG00000008448)	pecam1a (ENSACLG00000008456)	ENSACLG00000008472	ENSACLG00000008478	nptx1l (ENSACLG00000008482)
Zebra mbuna	MODERN SPECIES	1107	ENSMZEG00005009735	ENSMZEG00005009728	ENSMZEG00005009719	dhrs7b (ENSMZEG00005009693)	CRAMP1 (ENSMZEG00005009624)	jpt2 (ENSMZEG00005009602)	mapk8ip3 (ENSMZEG00005009202)	mrps34 (ENSMZEG00005009087)	spsb3a (ENSMZEG00005009070)	ATP6V0C (ENSMZEG00005009057)	ypel3 (ENSMZEG00005009048)	gdpd3a (ENSMZEG00005009007)	mapk3 (ENSMZEG00005008971)	nudt9 (ENSMZEG00005008961)	ENSMZEG00005008941	rabep2 (ENSMZEG00005008905) #22	atp2a1 (ENSMZEG00005008833)	NHERF1 (ENSMZEG00005008817)	ENSMZEG00005008794	xylt2 (ENSMZEG00005008761)	ENSMZEG00005008740	RECQL5 (ENSMZEG00005008718)	cdr2l (ENSMZEG00005008694)	arhgdia (ENSMZEG00005008664)	alyref (ENSMZEG00005008639)	mcrip1 (ENSMZEG00005008623)	ENSMZEG00005008606	pecam1a (ENSMZEG00005008593)	nptx1l (ENSMZEG00005008580)	sec14l1 (ENSMZEG00005008544)	MGAT5B (ENSMZEG00005008509)
Lyretail cichlid	MODERN SPECIES	493									mapk8ip3 (ENSNBRG00000002698)	nme3 (ENSNBRG00000002662)	mrps34 (ENSNBRG00000002645)	spsb3a (ENSNBRG00000002608)	ATP6V0C (ENSNBRG00000002597)	ypel3 (ENSNBRG00000002588)	gdpd3a (ENSNBRG00000002553)	rabep2 (ENSNBRG00000002478) #22	mapk3 (ENSNBRG00000002431)	nudt9 (ENSNBRG00000002323)	ENSNBRG00000002220	atp2a1 (ENSNBRG00000002110)	NHERF1 (ENSNBRG00000002084)	ENSNBRG00000002011	xylt2 (ENSNBRG00000001966)	ENSNBRG00000001920	RECQL5 (ENSNBRG00000001856)	cdr2l (ENSNBRG00000001812)	arhgdia (ENSNBRG00000001798)	ENSNBRG00000001775	alyref (ENSNBRG00000001747)	mcrip1 (ENSNBRG00000001726)	PPP1R27 (ENSNBRG00000001700)
Nile tilapia	MODERN SPECIES	16	natd1 (ENSONIG00000029787)	tmem11 (ENSONIG00000033344)	dhrs7b (ENSONIG00000019392)	CRAMP1 (ENSONIG00000019393)	jpt2 (ENSONIG00000019396)	mapk8ip3 (ENSONIG00000019397)	nme3 (ENSONIG00000033641)	mrps34 (ENSONIG00000019400)	spsb3a (ENSONIG00000019402)	ATP6V0C (ENSONIG00000019404)	ypel3 (ENSONIG00000039300)	gdpd3a (ENSONIG00000019407)	mapk3 (ENSONIG00000019408)	nudt9 (ENSONIG00000019410)	ENSONIG00000019412	rabep2 (ENSONIG00000019414) #22	atp2a1 (ENSONIG00000019415)	NHERF1 (ENSONIG00000019417)	ENSONIG00000019418	xylt2 (ENSONIG00000019421)	ENSONIG00000019425	RECQL5 (ENSONIG00000019427)	cdr2l (ENSONIG00000019431)	ARHGDIA (ENSONIG00000036385)	alyref (ENSONIG00000019434)	mcrip1 (ENSONIG00000031724)	PPP1R27 (ENSONIG00000019436)	pecam1a (ENSONIG00000019437)	kctd13 (ENSONIG00000034303)	nptx1l (ENSONIG00000019439)	sec14l1 (ENSONIG00000019441)
Midas cichlid	MODERN SPECIES	1292	tmem11 (ENSACIG00000007366)	dhrs7b (ENSACIG00000007351)	CRAMP1 (ENSACIG00000007303)	jpt2 (ENSACIG00000007288)	mapk8ip3 (ENSACIG00000007219)	nme3 (ENSACIG00000007201)	ENSACIG00000007185	mrps34 (ENSACIG00000007180)	spsb3a (ENSACIG00000007162)	ATP6V0C (ENSACIG00000007016)	ypel3 (ENSACIG00000006927)	gdpd3a (ENSACIG00000006901)	mapk3 (ENSACIG00000006876)	nudt9 (ENSACIG00000006759)	ENSACIG00000006696	rabep2 (ENSACIG00000006667) #22	atp2a1 (ENSACIG00000006617)	NHERF1 (ENSACIG00000006551)	ENSACIG00000006526	xylt2 (ENSACIG00000006491)	ENSACIG00000006451	RECQL5 (ENSACIG00000006402)	cdr2l (ENSACIG00000006387)	arhgdia (ENSACIG00000006372)	alyref (ENSACIG00000006351)	ENSACIG00000006341	PPP1R27 (ENSACIG00000006329)	pecam1a (ENSACIG00000006309)	nptx1l (ENSACIG00000006293)	sec14l1 (ENSACIG00000006261)	MGAT5B (ENSACIG00000006215)
Pomacentridae	ANCESTRAL SPECIES	47	ENSGT00390000014840.a	ENSGT00390000006617	ENSGT00940000158171	ENSGT00390000003337	ENSGT00390000007652	ENSGT00940000153496.a.a	ENSGT00940000161283	ENSGT00390000008964	ENSGT01030000234629.E.a.b	ENSGT00550000074873.ob.a.a	ENSGT00940000161514	ENSGT00940000160759	ENSGT00940000160691	ENSGT00390000017405	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.a	ENSGT00940000158326	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000157800	ENSGT00390000018570.b.b	ENSGT00390000006233.c.b.y	ENSGT00410000025615	ENSGT00390000018868.B.a	ENSGT00940000161850	ENSGT00940000159603.a	ENSGT01070000253837.d	ENSGT01060000248591.a.a.b.a.a	ENSGT00940000155386.b
Pomacentridae_A	ANCESTRAL SPECIES	54	ENSGT00940000155386.b	ENSGT01060000248591.a.a.b.a.a	ENSGT01070000253837.d	ENSGT00940000159603.a	ENSGT00940000161850	ENSGT00390000018868.B.a	ENSGT00390000006233.c.b.y	ENSGT00390000018570.b.b	ENSGT00940000157800	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000158326	ENSGT00940000158883.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000164922.g.a	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00550000074873.ob.a.a	ENSGT01030000234629.E.a.b	ENSGT00390000008964	ENSGT00940000161283	ENSGT00940000153496.a.a	ENSGT00390000007652	ENSGT00390000003337	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT01030000234586.A.a.a.b
Amphiprion	ANCESTRAL SPECIES	69	ENSGT00940000155386.b	ENSGT01060000248591.a.a.b.a.a	ENSGT01070000253837.d	ENSGT00940000159603.a	ENSGT00940000161850	ENSGT00390000018868.B.a	ENSGT00390000006233.c.b.y	ENSGT00390000018570.b.b	ENSGT00940000157800	ENSGT00940000163587.a.b.a.c.a	ENSGT00940000158326	ENSGT00940000158883.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000164922.g.a	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00550000074873.ob.a.a	ENSGT01030000234629.E.a.b	ENSGT00390000008964	ENSGT00940000161283	ENSGT00940000153496.a.a	ENSGT00390000007652	ENSGT00390000003337	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT01030000234586.A.a.a.b
Clown anemonefish	MODERN SPECIES	3666	sec14l1 (ENSAOCG00000013879)	nptx1l (ENSAOCG00000000875)	pecam1a (ENSAOCG00000013938)	PPP1R27 (ENSAOCG00000013962)	mcrip1 (ENSAOCG00000013980)	alyref (ENSAOCG00000014012)	arhgdia (ENSAOCG00000014022)	cdr2l (ENSAOCG00000014044)	RECQL5 (ENSAOCG00000000898)	ENSAOCG00000014074	xylt2 (ENSAOCG00000014102)	ENSAOCG00000014127	NHERF1 (ENSAOCG00000014141)	atp2a1 (ENSAOCG00000014250)	ENSAOCG00000014284	rabep2 (ENSAOCG00000014319) #22	nudt9 (ENSAOCG00000014335)	mapk3 (ENSAOCG00000014369)	gdpd3a (ENSAOCG00000014395)	ypel3 (ENSAOCG00000014406)	ATP6V0C (ENSAOCG00000000936)	spsb3a (ENSAOCG00000014447)	mrps34 (ENSAOCG00000014456)	nme3 (ENSAOCG00000014468)	mapk8ip3 (ENSAOCG00000014703)	jpt2 (ENSAOCG00000014761)	CRAMP1 (ENSAOCG00000014823)	dhrs7b (ENSAOCG00000014850)	tmem11 (ENSAOCG00000014866)	natd1 (ENSAOCG00000001014)	ENSAOCG00000001016
Orange clownfish	MODERN SPECIES	5	nptx1l (ENSAPEG00000014493)	ENSAPEG00000014532	pecam1a (ENSAPEG00000014544)	PPP1R27 (ENSAPEG00000014563)	mcrip1 (ENSAPEG00000014571)	alyref (ENSAPEG00000014603)	arhgdia (ENSAPEG00000014636)	cdr2l (ENSAPEG00000014656)	RECQL5 (ENSAPEG00000014670)	ENSAPEG00000014692	xylt2 (ENSAPEG00000014717)	ENSAPEG00000014768	NHERF1 (ENSAPEG00000014808)	atp2a1 (ENSAPEG00000014827)	ENSAPEG00000014910	rabep2 (ENSAPEG00000014940) #22	nudt9 (ENSAPEG00000014991)	mapk3 (ENSAPEG00000015004)	gdpd3a (ENSAPEG00000015054)	ypel3 (ENSAPEG00000015098)	ATP6V0C (ENSAPEG00000015108)	spsb3a (ENSAPEG00000015123)	mrps34 (ENSAPEG00000015149)	nme3 (ENSAPEG00000015159)	mapk8ip3 (ENSAPEG00000015279)	jpt2 (ENSAPEG00000015509)	CRAMP1 (ENSAPEG00000015527)	dhrs7b (ENSAPEG00000015655)	tmem11 (ENSAPEG00000015666)	natd1 (ENSAPEG00000015685)	ENSAPEG00000015702
Spiny chromis	MODERN SPECIES	488			pecam1a (ENSAPOG00000018371)	PPP1R27 (ENSAPOG00000018401)	mcrip1 (ENSAPOG00000018426)	ALYREF (ENSAPOG00000018455)	arhgdia (ENSAPOG00000018506)	cdr2l (ENSAPOG00000018536)	RECQL5 (ENSAPOG00000018549)	ENSAPOG00000018562	xylt2 (ENSAPOG00000018610)	ENSAPOG00000018652	NHERF1 (ENSAPOG00000018656)	atp2a1 (ENSAPOG00000018767)	ENSAPOG00000018833	rabep2 (ENSAPOG00000018876) #22	nudt9 (ENSAPOG00000018888)	mapk3 (ENSAPOG00000018936)
Bicolor damselfish	MODERN SPECIES	279	natd1 (ENSSPAG00000009988)	tmem11 (ENSSPAG00000009999)	dhrs7b (ENSSPAG00000010011)	CRAMP1 (ENSSPAG00000010052)	jpt2 (ENSSPAG00000010198)	mapk8ip3 (ENSSPAG00000010242)	nme3 (ENSSPAG00000010523)	mrps34 (ENSSPAG00000010529)	spsb3a (ENSSPAG00000010547)	ATP6V0C (ENSSPAG00000010562)	ypel3 (ENSSPAG00000010578)	gdpd3a (ENSSPAG00000010609)	mapk3 (ENSSPAG00000010656)	nudt9 (ENSSPAG00000010682)	ENSSPAG00000010697	rabep2 (ENSSPAG00000010734) #22	atp2a1 (ENSSPAG00000010793)	NHERF1 (ENSSPAG00000010949)	ENSSPAG00000010991	xylt2 (ENSSPAG00000011029)	ENSSPAG00000011077	RECQL5 (ENSSPAG00000011094)	cdr2l (ENSSPAG00000011127)	arhgdia (ENSSPAG00000011155)	ALYREF (ENSSPAG00000011178)	mcrip1 (ENSSPAG00000011191)	PPP1R27 (ENSSPAG00000011205)	pecam1a (ENSSPAG00000011220)	nptx1l (ENSSPAG00000011272)	sec14l1 (ENSSPAG00000011305)	MGAT5B (ENSSPAG00000011363)
Tiger tail seahorse	MODERN SPECIES	147	natd1 (ENSHCOG00000014482)	tmem11 (ENSHCOG00000014500)	dhrs7b (ENSHCOG00000014515)	CRAMP1 (ENSHCOG00000014566)	jpt2 (ENSHCOG00000014579)	mapk8ip3 (ENSHCOG00000000406)	nme3 (ENSHCOG00000014644)	mrps34 (ENSHCOG00000014649)	spsb3a (ENSHCOG00000014663)	ATP6V0C (ENSHCOG00000014674)	ypel3 (ENSHCOG00000000409)	gdpd3a (ENSHCOG00000014735)	mapk3 (ENSHCOG00000014759)	nudt9 (ENSHCOG00000014765)	ENSHCOG00000014773	rabep2 (ENSHCOG00000014791) #22	atp2a1 (ENSHCOG00000014828)	NHERF1 (ENSHCOG00000014832)	ENSHCOG00000014859	xylt2 (ENSHCOG00000014899)	ENSHCOG00000014910	RECQL5 (ENSHCOG00000014953)	cdr2l (ENSHCOG00000014988)	arhgdia (ENSHCOG00000015016)	ALYREF (ENSHCOG00000015046)	PPP1R27 (ENSHCOG00000015059)	mcrip1 (ENSHCOG00000015081)	nptx1l (ENSHCOG00000015100)	sec14l1 (ENSHCOG00000015124)	MGAT5B (ENSHCOG00000015154)	rasd4 (ENSHCOG00000015161)
Pinecone sodierfish	MODERN SPECIES	22	tmem11 (ENSMMDG00005011157)	dhrs7b (ENSMMDG00005011160)	CRAMP1 (ENSMMDG00005011165)	jpt2 (ENSMMDG00005011178)	mapk8ip3 (ENSMMDG00005011182)	ENSMMDG00005011186	nme3 (ENSMMDG00005011187)	mrps34 (ENSMMDG00005011191)	spsb3a (ENSMMDG00005011193)	ATP6V0C (ENSMMDG00005011195)	ypel3 (ENSMMDG00005011198)	gdpd3a (ENSMMDG00005011203)	mapk3 (ENSMMDG00005011250)	nudt9 (ENSMMDG00005012631)	ENSMMDG00005012632	rabep2 (ENSMMDG00005012636) #22	atp2a1 (ENSMMDG00005012645)	NHERF1 (ENSMMDG00005012673)	ENSMMDG00005012719	xylt2 (ENSMMDG00005012720)	ENSMMDG00005012723	RECQL5 (ENSMMDG00005012726)	cdr2l (ENSMMDG00005012729)	arhgdia (ENSMMDG00005012731)	ENSMMDG00005012732	ALYREF (ENSMMDG00005004118)	ENSMMDG00005004123	mcrip1 (ENSMMDG00005004147)	ENSMMDG00005004158	pecam1a (ENSMMDG00005004214)	nptx1l (ENSMMDG00005004229)
Cod	MODERN SPECIES	11	ENSGMOG00000003322	tmem11 (ENSGMOG00000003334)	ENSGMOG00000003340	ENSGMOG00000030019	jpt2 (ENSGMOG00000036879)	mapk8ip3 (ENSGMOG00000003414)	nme3 (ENSGMOG00000003474)	mrps34 (ENSGMOG00000028328)	spsb3a (ENSGMOG00000017939)	ENSGMOG00000028725	ENSGMOG00000022455	ENSGMOG00000002179	ENSGMOG00000036855	ENSGMOG00000002235	ENSGMOG00000003492	ENSGMOG00000003514 #22	ENSGMOG00000009830	ENSGMOG00000009835	cdr2l (ENSGMOG00000023890)	ENSGMOG00000025476	ENSGMOG00000029031	alyref (ENSGMOG00000009882)	mcrip1 (ENSGMOG00000009896)	ENSGMOG00000009906	ENSGMOG00000034550	ENSGMOG00000001934	ACO2 (ENSGMOG00000013297)	TOB2 (ENSGMOG00000031806)	ENSGMOG00000028909	ZC3H7B (ENSGMOG00000001969)	ENSGMOG00000024966
Protacanthopterygii	ANCESTRAL SPECIES	137	ENSGT00940000158525.u	ENSGT00940000165613	ENSGT01010000222313.A.b.b.a.a.a	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000154308.A.a.a.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a #33	ENSGT00390000015229 #34	ENSGT00390000007119 #21	ENSGT00390000005976.b #20	ENSGT00940000157795.g.b #28	ENSGT00950000183191.a.a.e.a #26	ENSGT00940000154813.e.a.b	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00500000045140.a.a	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00940000171190	ENSGT00390000015278	ENSGT00940000166574	ENSGT00390000001557	ENSGT00940000159512	ENSGT00940000157290	ENSGT00940000163009.b.a.a.b.b	ENSGT00940000163852.c.a.b.b.b	ENSGT01030000235138
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	25	ENSGT00940000165613.d	ENSGT01010000222313.A.b.b.a.a.a.b.a.a	ENSGT00390000008969.d	ENSGT00940000161103.a.a	ENSGT01100000263556.a.a.q.c.b.a.a.b	ENSGT00940000154308.A.a.a.a.e.b	ENSGT00940000159141.j.a	ENSGT00530000064242.a #33	ENSGT00390000015229.u #34	ENSGT00390000007119 #21	ENSGT00390000005976.b.f #20	ENSGT00940000157795.g.b.e #28	ENSGT00950000183191.a.a.e.a.a #26	ENSGT00970000194185.A.b	ENSGT00940000154813.e.a.b.hb.b	ENSGT00530000063743.a.g #22	ENSGT00940000164922.g.a.c	ENSGT00500000045140.a.a.f	ENSGT00940000164922.g.a.d	ENSGT00500000045140.a.a.e	ENSGT00390000017405	ENSGT00940000160691.b	ENSGT00940000160759.c	ENSGT00940000161514.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000171190	ENSGT00390000015278.k	ENSGT00940000166574.f	ENSGT00390000001557	ENSGT00940000159512.e.a.b	ENSGT00940000164039.b.b
Salmoninae_a	ANCESTRAL SPECIES	60	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000154308.A.a.a.a.e.a	ENSGT01000000214789.c.a	ENSGT00390000008969.d	ENSGT00940000161103.a.a	ENSGT01100000263556.a.a.q.c.b.a.a.b	ENSGT00940000154308.A.a.a.a.e.b	ENSGT00940000159141.j.a	ENSGT00530000064242.a #33	ENSGT00390000015229.u #34	ENSGT00390000007119 #21	ENSGT00390000005976.b.f #20	ENSGT00940000157795.g.b.e #28	ENSGT00950000183191.a.a.e.a.a #26	ENSGT00970000194185.A.b	ENSGT00530000063743.a.g #22	ENSGT00940000164922.g.a.c	ENSGT00500000045140.a.a.f	ENSGT00390000017405.g	ENSGT00940000160691.b	ENSGT00940000160759.c	ENSGT00940000161514.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000167070.a	ENSGT00390000015278.k	ENSGT00940000166574.f	ENSGT00390000001557	ENSGT00940000159512.e.a.b	ENSGT00940000164039.b.b	ENSGT00940000159512.e.a.a	ENSGT00940000163009.b.a.a.b.b.f.a
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00940000158525.u.e	ENSGT00940000165613.d	ENSGT01010000222313.A.b.b.a.a.a.b.a.a	ENSGT00390000008969.d	ENSGT00940000161103.a.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.b	ENSGT00940000154308.A.a.a.a.e.b	ENSGT00940000159141.j.a	ENSGT00530000064242.a.n #33	ENSGT00390000015229.u #34	ENSGT00390000007119 #21	ENSGT00390000005976.b.f #20	ENSGT00940000157795.g.b.e #28	ENSGT00950000183191.a.a.e.a.a #26	ENSGT00970000194185.A.b	ENSGT00530000063743.a.g #22	ENSGT00940000164922.g.a.c	ENSGT00500000045140.a.a.f	ENSGT00390000017405.g	ENSGT00940000160691.b	ENSGT00940000160759.c	ENSGT00940000161514.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000167070.a	ENSGT00390000015278.k	ENSGT00940000166574.f	ENSGT00390000001557	ENSGT00940000164039.b.b	ENSGT00940000159512.e.b	ENSGT00940000157290.jb	ENSGT01100000263742
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000020574	nlk1 (ENSOMYG00000020552)	ENSOMYG00000020543	mvp (ENSOMYG00000019414)	ENSOMYG00000019123	ENSOMYG00000019115	ENSOMYG00000075342	ENSOMYG00000019097	nupr1b (ENSOMYG00000019087) #33	sgf29 (ENSOMYG00000019077) #34	ENSOMYG00000019052 #21	spns1 (ENSOMYG00000018667) #20	atxn2l (ENSOMYG00000018530) #28	sh2b1 (ENSOMYG00000018479) #26	ENSOMYG00000018473	ENSOMYG00000018399 #22	ENSOMYG00000018208	ENSOMYG00000061599	nudt9 (ENSOMYG00000018161)	ENSOMYG00000036059	mapk3 (ENSOMYG00000017877)	gdpd3a (ENSOMYG00000017813)	ypel3 (ENSOMYG00000017802)	ENSOMYG00000017794	srrm2 (ENSOMYG00000017781)	thoc6 (ENSOMYG00000017639)	ENSOMYG00000017580	rnf25 (ENSOMYG00000017559)	ENSOMYG00000017547	kat8 (ENSOMYG00000017437)	fus (ENSOMYG00000017397)
Oncorhynchus_a	ANCESTRAL SPECIES	49	ENSGT00940000158525.u.e	ENSGT00940000165613.d	ENSGT01010000222313.A.b.b.a.a.a.b.a.a	ENSGT00390000008969.d	ENSGT00940000161103.a.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.b	ENSGT00940000154308.A.a.a.a.e.b	ENSGT00940000159141.j.a	ENSGT00530000064242.a.n #33	ENSGT00390000015229.u #34	ENSGT00390000007119 #21	ENSGT00390000005976.b.f #20	ENSGT00940000157795.g.b.e #28	ENSGT00950000183191.a.a.e.a.a #26	ENSGT00970000194185.A.b	ENSGT00530000063743.a.g #22	ENSGT00940000164922.g.a.c	ENSGT00500000045140.a.a.f	ENSGT00390000017405.g	ENSGT00940000160691.b	ENSGT00940000160759.c	ENSGT00940000161514.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000167070.a	ENSGT00390000015278.k	ENSGT00940000166574.f	ENSGT00390000001557	ENSGT00940000164039.b.b	ENSGT00940000159512.e.b	ENSGT00940000157290.jb	ENSGT01100000263742
Chinook salmon	MODERN SPECIES		spns1 (ENSOTSG00005031624) #20	atxn2l (ENSOTSG00005031631) #28	ENSOTSG00005031635	nlk1 (ENSOTSG00005031636)	TLCD3B (ENSOTSG00005031691)	mvp (ENSOTSG00005031702)	ENSOTSG00005034027	ENSOTSG00005034028	nupr1b (ENSOTSG00005034030) #33	sgf29 (ENSOTSG00005034033) #34	ENSOTSG00005034034 #21	spns1 (ENSOTSG00005034035) #20	atxn2l (ENSOTSG00005034036) #28	ENSOTSG00005034037 #26	ENSOTSG00005034038	rabep2 (ENSOTSG00005034039) #22	atp2a1 (ENSOTSG00005034040)	ENSOTSG00005034066	nudt9 (ENSOTSG00005034074)	mapk3 (ENSOTSG00005034078)	gdpd3a (ENSOTSG00005034783)	ypel3 (ENSOTSG00005034784)	ENSOTSG00005034785	ENSOTSG00005034786	thoc6 (ENSOTSG00005034787)	ENSOTSG00005034791	rnf25 (ENSOTSG00005034794)	ENSOTSG00005034795	kat8 (ENSOTSG00005034796)	fus (ENSOTSG00005034807)	ENSOTSG00005034808
Coho salmon	MODERN SPECIES	26	ENSOKIG00005035286	nlk1 (ENSOKIG00005035156)	TLCD3B (ENSOKIG00005035120)	mvp (ENSOKIG00005034595)	ENSOKIG00005034546	ENSOKIG00005034523	DOC2A (ENSOKIG00005034422)	nupr1b (ENSOKIG00005034398) #33	sgf29 (ENSOKIG00005034356) #34	ENSOKIG00005034335 #21	spns1 (ENSOKIG00005033859) #20	atxn2l (ENSOKIG00005033790) #28	sh2b1 (ENSOKIG00005033775) #26	ENSOKIG00005033764	ENSOKIG00005033759	rabep2 (ENSOKIG00005033749) #22	atp2a1 (ENSOKIG00005033348)	ENSOKIG00005033285	nudt9 (ENSOKIG00005033269)	mapk3 (ENSOKIG00005032714)	gdpd3a (ENSOKIG00005032630)	ypel3 (ENSOKIG00005032607)	ENSOKIG00005032594	srrm2 (ENSOKIG00005032566)	thoc6 (ENSOKIG00005032482)	ENSOKIG00005032449	rnf25 (ENSOKIG00005032429)	ENSOKIG00005032398	kat8 (ENSOKIG00005032213)	ENSOKIG00005032173	fus (ENSOKIG00005032146)
Salmo	ANCESTRAL SPECIES	28	ENSGT00940000165613.d	ENSGT00940000165613.c.a	ENSGT01000000214789.c.a	ENSGT00390000008969.d	ENSGT00940000161103.a.a	ENSGT01100000263556.a.a.q.c.b.a.a.b	ENSGT00940000154308.A.a.a.a.e.b	ENSGT00940000159141.j.a	ENSGT00530000064242.a #33	ENSGT00390000015229.u #34	ENSGT00390000007119 #21	ENSGT00390000005976.b.f #20	ENSGT00940000157795.g.b.e #28	ENSGT00950000183191.a.a.e.b #26	ENSGT00970000194185.A.b	ENSGT00530000063743.a.g #22	ENSGT00940000164922.g.a.c	ENSGT00500000045140.a.a.f	ENSGT00390000017405.g	ENSGT00940000160691.b	ENSGT00940000160759.c	ENSGT00940000161514.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.b	ENSGT00940000167070.a	ENSGT00390000015278.k	ENSGT00940000166574.f	ENSGT00390000001557.g	ENSGT00940000164039.b.b	ENSGT00940000159512.e.a.a	ENSGT00940000163009.b.a.a.b.b.f.a	ENSGT00940000157290.kb
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000003784	cdipt (ENSSSAG00000003583)	nlk1 (ENSSSAG00000104952)	ENSSSAG00000117398	mvp (ENSSSAG00000002790)	ENSSSAG00000002708	ENSSSAG00000106667	ENSSSAG00000002646	sgf29 (ENSSSAG00000002587) #34	ENSSSAG00000090286	ENSSSAG00000082141 #21	spns1 (ENSSSAG00000002333) #20	atxn2l (ENSSSAG00000002114) #28	sh2b1 (ENSSSAG00000002066) #26	ENSSSAG00000086169	rabep2 (ENSSSAG00000002044) #22	ENSSSAG00000001899	ENSSSAG00000001843	nudt9 (ENSSSAG00000001839)	mapk3 (ENSSSAG00000001801)	gdpd3a (ENSSSAG00000001787)	ypel3 (ENSSSAG00000001780)	ENSSSAG00000110590	srrm2 (ENSSSAG00000119729)	thoc6 (ENSSSAG00000001724)	ENSSSAG00000001707	rnf25 (ENSSSAG00000001686)	ENSSSAG00000001665	kat8 (ENSSSAG00000001624)	ENSSSAG00000090251	fus (ENSSSAG00000001599)
River trout	MODERN SPECIES	25	MAZ (ENSSTUG00000005349)	nlk1 (ENSSTUG00000005242)	ENSSTUG00000005210	mvp (ENSSTUG00000004628)	ENSSTUG00000004603	ENSSTUG00000004585	DOC2A (ENSSTUG00000004563)	nupr1b (ENSSTUG00000004556) #33	sgf29 (ENSSTUG00000004454) #34	nfatc2ip (ENSSTUG00000004441) #21	spns1 (ENSSTUG00000004283) #20	atxn2l (ENSSTUG00000004260) #28	sh2b1 (ENSSTUG00000004219) #26	ENSSTUG00000004203	ENSSTUG00000004191	rabep2 (ENSSTUG00000004166) #22	atp2a1 (ENSSTUG00000003804)	ENSSTUG00000003703	nudt9 (ENSSTUG00000025790)	mapk3 (ENSSTUG00000024739)	gdpd3a (ENSSTUG00000024692)	ypel3 (ENSSTUG00000024680)	ENSSTUG00000024670	srrm2 (ENSSTUG00000024654)	thoc6 (ENSSTUG00000024533)	ENSSTUG00000024464	rnf25 (ENSSTUG00000024416)	ENSSTUG00000024390	kat8 (ENSSTUG00000024153)	fus (ENSSTUG00000024048)	ENSSTUG00000024029
Huchen	MODERN SPECIES	690						ENSHHUG00000036083	nupr1b (ENSHHUG00000036073) #33	sgf29 (ENSHHUG00000036064) #34	ENSHHUG00000036061 #21	spns1 (ENSHHUG00000035960) #20	atxn2l (ENSHHUG00000035923) #28	ENSHHUG00000035917 #26	sh2b1 (ENSHHUG00000035910) #26	ENSHHUG00000035902	ENSHHUG00000035889	rabep2 (ENSHHUG00000035876) #22	atp2a1 (ENSHHUG00000035137)	ENSHHUG00000035090	nudt9 (ENSHHUG00000035083)	mapk3 (ENSHHUG00000034866)	gdpd3a (ENSHHUG00000034845)	ypel3 (ENSHHUG00000034830)	ENSHHUG00000034823	ENSHHUG00000034817	thoc6 (ENSHHUG00000034797)	ENSHHUG00000034787	rnf25 (ENSHHUG00000034763)	ENSHHUG00000034745	kat8 (ENSHHUG00000034617)	fus (ENSHHUG00000034599)	zgc:100868 (ENSHHUG00000034561)
Salmoninae	ANCESTRAL SPECIES	866																ENSGT00530000063743.a.h #22	ENSGT00940000160691.a	ENSGT00940000160759.d	ENSGT00940000161514.a	ENSGT00970000197626	ENSGT00940000167070.b	ENSGT00390000015278.l	ENSGT00940000166574.e
Salmoninae_a	ANCESTRAL SPECIES	120												ENSGT00390000015229.v #34	ENSGT00390000005976.b.e #20	ENSGT00940000157795.g.b.f #28	ENSGT00950000183191.a.a.e.a.b #26	ENSGT00530000063743.a.h #22	ENSGT00940000164922.g.a.d	ENSGT00500000045140.a.a.e	ENSGT00390000017405.h	ENSGT00940000160691.a	ENSGT00940000160759.d	ENSGT00940000161514.a	ENSGT00970000197626	ENSGT00940000167070.b	ENSGT00390000015278.l	ENSGT00940000166574.e	ENSGT00950000182987.c.a.a.lb.e.a	ENSGT00930000151040.b.a	ENSGT00940000165851.f	ENSGT00940000155391.b.q.b	ENSGT01010000222360.D.a.g.a
Salmo	ANCESTRAL SPECIES	64	ENSGT01100000263614.h	ENSGT00940000164903.a.f.b	ENSGT00940000159991.A.a.r.a	ENSGT00940000158525.u.f	ENSGT00940000165613.c.b	ENSGT01010000222313.A.b.b.a.a.a.a	ENSGT00390000008969.c	ENSGT00940000161103.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000154308.A.a.a.a.e.a	ENSGT01080000259813	ENSGT00390000015229.v #34	ENSGT00390000005976.b.e #20	ENSGT00940000157795.g.b.f #28	ENSGT00950000183191.a.a.e.a.b #26	ENSGT00530000063743.a.h #22	ENSGT00940000164922.g.a.d	ENSGT00500000045140.a.a.e	ENSGT00390000017405.h	ENSGT00940000160691.a	ENSGT00940000160759.d	ENSGT00940000161514.a	ENSGT00970000197626	ENSGT00940000167070.b	ENSGT00390000015278.l	ENSGT00940000166574.e	ENSGT00390000001557.h	ENSGT00940000159512.e.a.b	ENSGT00950000182987.c.a.a.lb.e.a	ENSGT00930000151040.b.a	ENSGT00940000165851.f
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000008130	ENSSSAG00000076984	ENSSSAG00000075864	ENSSSAG00000113341	nlk1 (ENSSSAG00000003453)	ENSSSAG00000075483	MVP (ENSSSAG00000074980)	ENSSSAG00000074949	ENSSSAG00000074945	ENSSSAG00000074942	ENSSSAG00000088612	sgf29 (ENSSSAG00000060403) #34	spns1 (ENSSSAG00000074853) #20	ENSSSAG00000074838 #28	sh2b1 (ENSSSAG00000097984) #26	ENSSSAG00000074813 #22	ENSSSAG00000072851	ENSSSAG00000072774	nudt9 (ENSSSAG00000072771)	mk03 (ENSSSAG00000072637)	gdpd3a (ENSSSAG00000119028)	ypel3 (ENSSSAG00000095818)	ENSSSAG00000072625	srrm2 (ENSSSAG00000072620)	thoc6 (ENSSSAG00000072614)	ENSSSAG00000087917	rnf25 (ENSSSAG00000072594)	kat8 (ENSSSAG00000072454)	ALDOA (ENSSSAG00000072436)	ENSSSAG00000118112	ENSSSAG00000082459
River trout	MODERN SPECIES	33	ENSSTUG00000036009	ENSSTUG00000035959	nlk1 (ENSSTUG00000035749)	TLCD3B (ENSSTUG00000035730)	mvp (ENSSTUG00000035104)	ENSSTUG00000035069	ENSSTUG00000035060	ENSSTUG00000035056	ENSSTUG00000035053	ENSSTUG00000035041	sgf29 (ENSSTUG00000034841) #34	spns1 (ENSSTUG00000034541) #20	atxn2l (ENSSTUG00000034437) #28	sh2b1 (ENSSTUG00000034417) #26	ENSSTUG00000034414	rabep2 (ENSSTUG00000034400) #22	atp2a1 (ENSSTUG00000033861)	ENSSTUG00000033737	nudt9 (ENSSTUG00000033588)	gdpd3a (ENSSTUG00000033054)	ypel3 (ENSSTUG00000033047)	ENSSTUG00000033038	srrm2 (ENSSTUG00000033001)	thoc6 (ENSSTUG00000032616)	ENSSTUG00000032581	rnf25 (ENSSTUG00000032563)	ENSSTUG00000032561	kat8 (ENSSTUG00000031761)	ALDOA (ENSSTUG00000031661)	PPP4C (ENSSTUG00000031613)	tspan4b (ENSSTUG00000031578)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT01100000263614.h	ENSGT00940000164903.a.f.b	ENSGT00940000159991.A.a.r.a	ENSGT00940000158525.u.f	ENSGT00940000165613.c	ENSGT01010000222313.A.b.b.a.a.a.b.b	ENSGT00390000008969.c	ENSGT00940000161103.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000154308.A.a.a.a.e.a	ENSGT00530000064242.a.m #33	ENSGT00390000015229.v #34	ENSGT00390000005976.b.e #20	ENSGT00940000157795.g.b.f #28	ENSGT00950000183191.a.a.e.a.b #26	ENSGT00530000063743.a.h #22	ENSGT00940000164922.g.a.d	ENSGT00500000045140.a.a.e	ENSGT00390000017405.h	ENSGT00940000160691.a	ENSGT00940000160759.d	ENSGT00940000161514.a	ENSGT00940000161127	ENSGT00940000166574.e	ENSGT00940000159512.f	ENSGT00950000182987.c.a.a.lb.e.a	ENSGT00930000151040.b.a	ENSGT00940000165851.f	ENSGT00940000155391.b.q.b	ENSGT00950000183205.b.a.b.a.a.m.a	ENSGT00440000037417.B.a.e.a
Rainbow trout	MODERN SPECIES	22	ENSOMYG00000047876	ENSOMYG00000045456	nlk1 (ENSOMYG00000045480)	ENSOMYG00000057189	ENSOMYG00000060666	mvp (ENSOMYG00000045612)	ENSOMYG00000045769	ENSOMYG00000073168	ENSOMYG00000045777	nupr1b (ENSOMYG00000045779) #33	sgf29 (ENSOMYG00000045786) #34	spns1 (ENSOMYG00000045834) #20	atxn2l (ENSOMYG00000045902) #28	sh2b1 (ENSOMYG00000045910) #26	ENSOMYG00000064326	ENSOMYG00000045914 #22	ENSOMYG00000059308	ENSOMYG00000018174	nudt9 (ENSOMYG00000045938)	mapk3 (ENSOMYG00000045959)	gdpd3a (ENSOMYG00000046033)	ypel3 (ENSOMYG00000067517)	ENSOMYG00000071681	ENSOMYG00000046052	ENSOMYG00000046063	ENSOMYG00000046091	ENSOMYG00000052713	ENSOMYG00000046145	ENSOMYG00000046168	ENSOMYG00000046180	ENSOMYG00000046188
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT01100000263614.h	ENSGT00940000164903.a.f.b	ENSGT00940000159991.A.a.r.a	ENSGT00940000158525.u.f	ENSGT00940000165613.c	ENSGT01010000222313.A.b.b.a.a.a.b.b	ENSGT00390000008969.c	ENSGT00940000161103.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000154308.A.a.a.a.e.a	ENSGT00530000064242.a.m #33	ENSGT00390000015229.v #34	ENSGT00390000005976.b.e #20	ENSGT00940000157795.g.b.f #28	ENSGT00950000183191.a.a.e.b #26	ENSGT00530000063743.a.h #22	ENSGT00940000164922.g.a.d	ENSGT00500000045140.a.a.e	ENSGT00390000017405.h	ENSGT00940000160691.a	ENSGT00940000160759.d	ENSGT00940000161514.a	ENSGT00940000161127	ENSGT00940000166574.e	ENSGT00940000159512.f	ENSGT00950000182987.c.a.a.lb.e.a	ENSGT00930000151040.b.a	ENSGT00970000197626	ENSGT00940000165851.f	ENSGT00940000155391.b.q.b	ENSGT00950000183205.b.a.b.a.a.m.a
Chinook salmon	MODERN SPECIES		trpm4a (ENSOTSG00005034855)	trpm4a (ENSOTSG00005034856)	ENSOTSG00005034857	ENSOTSG00005000223	PRR12 (ENSOTSG00005000266)	prrg2 (ENSOTSG00005000311)	rras (ENSOTSG00005000315)	ENSOTSG00005000320	ENSOTSG00005000323	AP2A1 (ENSOTSG00005000335)	prmt1 (ENSOTSG00005000386)	ENSOTSG00005006150	ENSOTSG00005006151	ENSOTSG00005006152 #26	ENSOTSG00005006153 #26	rabep2 (ENSOTSG00005006154) #22	ENSOTSG00005006162	ENSOTSG00005006163	nudt9 (ENSOTSG00005006165)	mapk3 (ENSOTSG00005006178)	gdpd3a (ENSOTSG00005007372)	ypel3 (ENSOTSG00005007374)	ENSOTSG00005007375	ENSOTSG00005007377	ALDOA (ENSOTSG00005007379)	PPP4C (ENSOTSG00005007716)	ENSOTSG00005007719	tspan4b (ENSOTSG00005007721)	pax10 (ENSOTSG00005007722)	ENSOTSG00005007724	ENSOTSG00005007726
Coho salmon	MODERN SPECIES	1	ENSOKIG00005033211	ENSOKIG00005033280	ENSOKIG00005033532	nlk1 (ENSOKIG00005033593)	ENSOKIG00005033830	mvp (ENSOKIG00005033903)	ENSOKIG00005034917	ENSOKIG00005034932	ENSOKIG00005034944	nupr1b (ENSOKIG00005034959) #33	sgf29 (ENSOKIG00005035013) #34	spns1 (ENSOKIG00005035236) #20	atxn2l (ENSOKIG00005023838) #28	ENSOKIG00005023879	sh2b1 (ENSOKIG00005023894) #26	ENSOKIG00005023931 #22	ENSOKIG00005024048	ENSOKIG00005024209	nudt9 (ENSOKIG00005024258)	mapk3 (ENSOKIG00005024341)	gdpd3a (ENSOKIG00005025099)	ypel3 (ENSOKIG00005025129)	ENSOKIG00005025163	ENSOKIG00005025205	KAT8 (ENSOKIG00005025304)	ALDOA (ENSOKIG00005025885)	PPP4C (ENSOKIG00005025908)	ENSOKIG00005025926	ENSOKIG00005025936	ENSOKIG00005025951	ENSOKIG00005025977
Huchen	MODERN SPECIES	148	ENSHHUG00000036192	ENSHHUG00000035986	cdipt (ENSHHUG00000035972)	ENSHHUG00000035967	ENSHHUG00000035952	nlk1 (ENSHHUG00000035901)	TLCD3B (ENSHHUG00000035898)	mvp (ENSHHUG00000035581)	ENSHHUG00000035577	ENSHHUG00000035576	ENSHHUG00000035574	ENSHHUG00000035571	sgf29 (ENSHHUG00000035558) #34	spns1 (ENSHHUG00000035451) #20	sh2b1 (ENSHHUG00000035423) #26	rabep2 (ENSHHUG00000035413) #22	atp2a1 (ENSHHUG00000035305)	ENSHHUG00000035286	mapk3 (ENSHHUG00000035192)	gdpd3a (ENSHHUG00000035142)	ypel3 (ENSHHUG00000035129)	ENSHHUG00000035124	srrm2 (ENSHHUG00000035086)	ENSHHUG00000035072	ENSHHUG00000035058	rnf25 (ENSHHUG00000035036)	kat8 (ENSHHUG00000034994)	ALDOA (ENSHHUG00000034863)	PPP4C (ENSHHUG00000034819)	ENSHHUG00000034816	tspan4b (ENSHHUG00000034812)
Northern pike	MODERN SPECIES	10	TLCD3B (ENSELUG00000024181)	mvp (ENSELUG00000024149)	ENSELUG00000024031	ENSELUG00000027254	ENSELUG00000024006	ENSELUG00000023980	nupr1b (ENSELUG00000023903) #33	sgf29 (ENSELUG00000023888) #34	ENSELUG00000023841 #21	ENSELUG00000026274	spns1 (ENSELUG00000023792) #20	atxn2l (ENSELUG00000023740) #28	sh2b1 (ENSELUG00000023715) #26	ENSELUG00000023676	HSPA2 (ENSELUG00000023653)	rabep2 (ENSELUG00000023638) #22	atp2a1 (ENSELUG00000023607)	ENSELUG00000023508	nudt9 (ENSELUG00000023446)	mapk3 (ENSELUG00000023431)	gdpd3a (ENSELUG00000023397)	ypel3 (ENSELUG00000023389)	ENSELUG00000028791	ENSELUG00000023340	thoc6 (ENSELUG00000023325)	ENSELUG00000023247	rnf25 (ENSELUG00000023202)	ENSELUG00000023197	kat8 (ENSELUG00000023184)	ENSELUG00000031790	ENSELUG00000022983
Otomorpha	ANCESTRAL SPECIES	50									ENSGT00940000163009.a	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00510000048410	ENSGT00390000007911	ENSGT00940000155338.r	ENSGT00940000157943.b	ENSGT00940000157202.h	ENSGT00940000153173.b.b	ENSGT00940000158799	ENSGT00940000154971.u.a.f	ENSGT00940000156363.b	ENSGT00390000014272	ENSGT00940000164828	ENSGT01080000257420.C.b.b.c.a	ENSGT01050000244905.B	ENSGT00950000182910.b.g.b
Clupeiformes	ANCESTRAL SPECIES	471									ENSGT00940000163009.a	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a
Denticle herring	MODERN SPECIES	17	DOC2A (ENSDCDG00000026778)	slc6a6a (ENSDCDG00000026896)	ENSDCDG00000029119	ABTB1 (ENSDCDG00000029122)	ENSDCDG00000029134	ENSDCDG00000029139	cln3 (ENSDCDG00000029149) #30	nudt9 (ENSDCDG00000029155)	odad4 (ENSDCDG00000029164)	ENSDCDG00000029183	odad4 (ENSDCDG00000029189)	mapk3 (ENSDCDG00000029216)	gdpd3a (ENSDCDG00000029715)	ypel3 (ENSDCDG00000029722)	ENSDCDG00000029724	rabep2 (ENSDCDG00000029726) #22	atp2a1 (ENSDCDG00000029738)	asic1a (ENSDCDG00000029811)	gpd1a (ENSDCDG00000029865)	si:ch73-141c7.1 (ENSDCDG00000029871)	ENSDCDG00000029903	odad4 (ENSDCDG00000029908)	dnajc7 (ENSDCDG00000029925)	nkiras2 (ENSDCDG00000030166)	vat1 (ENSDCDG00000030171)	phb (ENSDCDG00000030174)	ZNF652 (ENSDCDG00000030177)	phospho1 (ENSDCDG00000030180)	natd1 (ENSDCDG00000030184)	tmem11 (ENSDCDG00000030186)	dhrs7b (ENSDCDG00000030190)
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000003457	ENSCHAG00000003369	ENSCHAG00000003348	ENSCHAG00000003244	ALDOA (ENSCHAG00000003173)	ENSCHAG00000003142	ENSCHAG00000003093	ENSCHAG00000002716 #30	ENSCHAG00000002692	ENSCHAG00000002584 #30	nudt9 (ENSCHAG00000002537)	mapk3 (ENSCHAG00000012127)	gdpd3a (ENSCHAG00000011999)	ypel3 (ENSCHAG00000011970)	ENSCHAG00000011796	rabep2 (ENSCHAG00000011730) #22	atp2a1 (ENSCHAG00000010266)	sh2b1 (ENSCHAG00000010183) #26	spns1 (ENSCHAG00000010122) #20	ENSCHAG00000010102 #21	sgf29 (ENSCHAG00000010057) #34	ENSCHAG00000010036	ENSCHAG00000010030	ENSCHAG00000010021	mvp (ENSCHAG00000009698)	nlk1 (ENSCHAG00000009646)	ENSCHAG00000009604	ENSCHAG00000009576	ENSCHAG00000009308	ENSCHAG00000009184	ENSCHAG00000009152
Otophysi	ANCESTRAL SPECIES	11	ENSGT01080000257365.b.a.a.b.b.f	ENSGT00390000012062	ENSGT00940000166828	ENSGT00940000166962	ENSGT00390000017613	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.f	ENSGT00390000017837.a.v	ENSGT00940000156993.d	ENSGT00940000157982.a.b	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00940000154813.e.a.a.b	ENSGT00940000154813.e.a.a.a	ENSGT00940000160415	ENSGT00940000165444	ENSGT00940000154881.c.b	ENSGT00510000048410	ENSGT00390000007911	ENSGT00940000155338.r	ENSGT00940000157943.b	ENSGT00940000157202.h	ENSGT00940000153173.b.b	ENSGT00940000158799	ENSGT00940000154971.u.a.f	ENSGT00940000156363.b
Characiphysae	ANCESTRAL SPECIES	11	ENSGT00940000166828	ENSGT00940000166962	ENSGT00390000017613	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.f	ENSGT00390000017837.a.v	ENSGT00940000156993.d	ENSGT00940000157982.a.b	ENSGT00940000163852.c.a.a	ENSGT00940000163009.b.a.a.b.b.eb	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00940000154813.e.a.a.a	ENSGT00940000160415	ENSGT00940000165444	ENSGT00940000154881.c.b	ENSGT00510000048410	ENSGT00390000007911	ENSGT00940000155338.r	ENSGT00940000157943.b	ENSGT00940000157202.h	ENSGT00940000153173.b.b	ENSGT00940000158799.e	ENSGT00940000154971.u.a.f	ENSGT00940000156363.b	ENSGT00390000014272
Channel catfish	MODERN SPECIES	11	ENSIPUG00000015962	ENSIPUG00000016123	retsat.2 (ENSIPUG00000016137)	ENSIPUG00000016164	nmt1 (ENSIPUG00000016186)	plcd3a (ENSIPUG00000016226)	ENSIPUG00000016371	zgc:100868 (ENSIPUG00000016407)	CLN3 (ENSIPUG00000016466) #30	Nudt9 (ENSIPUG00000016564)	mapk3 (ENSIPUG00000016591)	gdpd3a (ENSIPUG00000016630)	ypel3 (ENSIPUG00000016665)	ENSIPUG00000016678	ENSIPUG00000016694	Rabep2 (ENSIPUG00000016716) #22	atp2a1 (ENSIPUG00000016821)	ENSIPUG00000016938	baxa (ENSIPUG00000016971)	ENSIPUG00000017040	ENSIPUG00000017198	ENSIPUG00000017207	hsp70.1 (ENSIPUG00000017212)	HSD17B1 (ENSIPUG00000017226)	si:ch73-141c7.1 (ENSIPUG00000017247)	Acly (ENSIPUG00000017257)	CNP (ENSIPUG00000017367)	ttc25 (ENSIPUG00000017385)	dnajc7 (ENSIPUG00000017399)	nkiras2 (ENSIPUG00000017444)	znf385c (ENSIPUG00000017483)
Characiphysae_b	ANCESTRAL SPECIES	66	ENSGT00940000166828	ENSGT00940000166962	ENSGT00390000017613	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.f	ENSGT00390000017837.a.v	ENSGT00940000156993.d	ENSGT00940000157982.a.b	ENSGT00940000163852.c.a.a	ENSGT00940000163009.b.a.a.b.b.eb	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a
Characoidei	ANCESTRAL SPECIES	66	ENSGT00390000012062	ENSGT00940000166828	ENSGT00940000166962	ENSGT00390000017613	ENSGT00390000017837.a.v	ENSGT00940000156993.d	ENSGT00940000157982.a.b	ENSGT00940000163852.c.a.a	ENSGT00940000163009.b.a.a.b.b.eb	ENSGT00390000003249 #30	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a
Red-bellied piranha	MODERN SPECIES	729						zgc:100868 (ENSPNAG00000021828)	ENSPNAG00000021852	zgc:100868 (ENSPNAG00000021879)	zgc:100868 (ENSPNAG00000005881)	cln3 (ENSPNAG00000021991) #30	nudt9 (ENSPNAG00000022007)	mapk3 (ENSPNAG00000022031)	gdpd3a (ENSPNAG00000022079)	ypel3 (ENSPNAG00000022115)	ENSPNAG00000022138	rabep2 (ENSPNAG00000022220) #22	atp2a1 (ENSPNAG00000022409)
Mexicana tetra	MODERN SPECIES	11	tmem98 (ENSAMXG00000033864)	ENSAMXG00000015220	ENSAMXG00000041717	RETSAT (ENSAMXG00000017893)	nmt1a (ENSAMXG00000017886)	plcd3a (ENSAMXG00000017880)	ENSAMXG00000042175	zgc:100868 (ENSAMXG00000017853)	cln3 (ENSAMXG00000036462) #30	nudt9 (ENSAMXG00000017827)	mapk3 (ENSAMXG00000017822)	gdpd3a (ENSAMXG00000029825)	ENSAMXG00000043697	ypel3 (ENSAMXG00000037728)	ENSAMXG00000017817	rabep2 (ENSAMXG00000017807) #22	atp2a1 (ENSAMXG00000017798)	ENSAMXG00000039796	ENSAMXG00000029544	ENSAMXG00000035369	dnajc7 (ENSAMXG00000043280)	nkiras2 (ENSAMXG00000032340)	ENSAMXG00000029867	ZNF385C (ENSAMXG00000000412)	dhx58 (ENSAMXG00000030658)	kat2a (ENSAMXG00000041137)	rab5c (ENSAMXG00000043717)	kcnh4a (ENSAMXG00000000458)	ENSAMXG00000033555	ENSAMXG00000032517	ENSAMXG00000000476
Electric eel	MODERN SPECIES	1093										cln3 (ENSEEEG00000001577) #30	nudt9 (ENSEEEG00000001578)	mapk3 (ENSEEEG00000001594)	gdpd3a (ENSEEEG00000001676)	ypel3 (ENSEEEG00000001679)	ENSEEEG00000001684	rabep2 (ENSEEEG00000001698) #22	atp2a1 (ENSEEEG00000001704)	ENSEEEG00000001705	ENSEEEG00000001706
Cyprinoidei	ANCESTRAL SPECIES	1	ENSGT00940000158979	ENSGT01050000244894.b.a	ENSGT00940000157381	ENSGT00950000183198.c.a	ENSGT00390000003014	ENSGT00390000005481	ENSGT00940000155641.g.a	ENSGT00940000156498.g.a	ENSGT00940000153469.a.a.k	ENSGT00930000151040.a.b	ENSGT00390000017405	ENSGT00940000160691	ENSGT00940000160759	ENSGT00940000161514	ENSGT00500000045140.a.a	ENSGT00530000063743.a #22	ENSGT00940000164922.g.a	ENSGT00940000154813.e.a.a.b	ENSGT00940000154813.e.a.a.a	ENSGT00940000160415	ENSGT00940000165444	ENSGT00940000154881.c.b	ENSGT00510000048410	ENSGT00390000007911	ENSGT00940000155338.r	ENSGT00940000157943.b	ENSGT00940000157202.h	ENSGT00940000153173.b.b	ENSGT00940000158799	ENSGT00940000154971.u.a.f	ENSGT00940000156363.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	160	ENSGT01050000244894.b.a.i	ENSGT00940000157381.e	ENSGT00950000183198.c.a	ENSGT00390000003014.g	ENSGT00950000183198.d	ENSGT00390000005481	ENSGT00940000155641.g.a.b	ENSGT00940000156498.g.a.a	ENSGT00940000153469.a.a.k.a	ENSGT00930000151040.a.b.a	ENSGT00390000017405.e	ENSGT00940000160691.c	ENSGT00940000160759.i.a	ENSGT00940000161514.d	ENSGT00500000045140.a.a.d	ENSGT00530000063743.a.i #22	ENSGT00940000164922.g.a.a	ENSGT00940000154813.e.a.a.b.a.a.b	ENSGT00940000154813.e.a.a.a.e	ENSGT00940000160415	ENSGT00940000165444.c	ENSGT00940000154881.c.b.a	ENSGT00510000048410.c	ENSGT00390000007911.ab	ENSGT00940000155338.r.g	ENSGT00940000157943.b.d	ENSGT00940000157202.h.e	ENSGT00940000153173.b.b.c.b	ENSGT00940000158799.c	ENSGT00940000158799.d.a	ENSGT00940000154971.u.a.f.a.a
Cyprininae_a	ANCESTRAL SPECIES	267	ENSGT01050000244894.b.a.j	ENSGT00940000157381.f	ENSGT00950000183198.c.b.b	ENSGT00390000003014.h	ENSGT00390000003014.g	ENSGT00390000005481	ENSGT00940000155641.g.a.b	ENSGT00940000156498.g.a.a	ENSGT00940000153469.a.a.k.a	ENSGT00930000151040.a.b.a	ENSGT00390000017405.e	ENSGT00940000160691.c	ENSGT00940000160759.i.a	ENSGT00940000161514.d	ENSGT00500000045140.a.a.d	ENSGT00530000063743.a.i #22	ENSGT00940000164922.g.a.a	ENSGT00940000154813.e.a.a.a.e	ENSGT00940000154813.e.a.a.b.a.a.a	ENSGT00940000165444.c	ENSGT00940000154881.c.b.a	ENSGT00510000048410.c	ENSGT00390000007911.ab	ENSGT00940000155338.r.g	ENSGT00940000157943.b.d	ENSGT00940000157202.h.e	ENSGT00940000153173.b.b.c.b	ENSGT00940000158799.c	ENSGT00940000158799.d.a	ENSGT00940000154971.u.a.f.a.a	ENSGT00940000156363.b.a
Golden-line barbel	MODERN SPECIES	129	rab40c (ENSSGRG00000009908)	ENSSGRG00000009905	xylt1 (ENSSGRG00000009904)	ENSSGRG00000009894	ENSSGRG00000009893	zgc:153240 (ENSSGRG00000009892)	rhot1a (ENSSGRG00000009507)	ENSSGRG00000009250	ENSSGRG00000009246	ppp4ca (ENSSGRG00000009195)	nudt9 (ENSSGRG00000009194)	mapk3 (ENSSGRG00000007158)	gdpd3a (ENSSGRG00000007151)	ypel3 (ENSSGRG00000007134)	ENSSGRG00000007095	rabep2 (ENSSGRG00000007092) #22	atp2a1 (ENSSGRG00000007041)	si:ch73-141c7.1 (ENSSGRG00000006986)	aclya (ENSSGRG00000001646)	ENSSGRG00000001558	odad4 (ENSSGRG00000001544)	dnajc7 (ENSSGRG00000001264)	nkiras2 (ENSSGRG00000001165)	ENSSGRG00000001154
Common carp reference	MODERN SPECIES	3	rab40c (ENSCCRG00000063693)	ENSCCRG00000021850	xylt1 (ENSCCRG00000021880)	rps15a (ENSCCRG00000045214)	ENSCCRG00000054925	zgc:153240 (ENSCCRG00000045205)	rhot1a (ENSCCRG00000036369)	ENSCCRG00000035627	ENSCCRG00000045147	ppp4ca (ENSCCRG00000045096)	nudt9 (ENSCCRG00000045075)	mapk3 (ENSCCRG00000034221)	gdpd3a (ENSCCRG00000034157)	ypel3 (ENSCCRG00000072463)	ENSCCRG00000034145	rabep2 (ENSCCRG00000043969) #22	ENSCCRG00000074982	ENSCCRG00000057243	ENSCCRG00000071962	ENSCCRG00000043718	si:ch73-141c7.1 (ENSCCRG00000043713)	aclya (ENSCCRG00000043645)	ENSCCRG00000006579	odad4 (ENSCCRG00000006537)	dnajc7 (ENSCCRG00000066828)	nkiras2 (ENSCCRG00000062265)	ZNF385C (ENSCCRG00000053163)	dhx58 (ENSCCRG00000033653)	kat2a (ENSCCRG00000001483)	rab5c (ENSCCRG00000070126)	kcnh4a (ENSCCRG00000041482)
Goldfish	MODERN SPECIES	22	MPP3 (ENSCARG00000055433)	ENSCARG00000055735	ZNF281 (ENSCARG00000055752)	ENSCARG00000055764	zgc:153240 (ENSCARG00000055784)	rhot1a (ENSCARG00000055883)	ENSCARG00000057110	ENSCARG00000057530	ENSCARG00000057536	ppp4ca (ENSCARG00000057542)	nudt9 (ENSCARG00000057560)	mapk3 (ENSCARG00000057611)	gdpd3a (ENSCARG00000058572)	ypel3 (ENSCARG00000058708)	ENSCARG00000058745	rabep2 (ENSCARG00000058816) #22	atp2a1 (ENSCARG00000058851)	ENSCARG00000058921	ENSCARG00000058956	hsd17b1 (ENSCARG00000058974)	si:ch73-141c7.1 (ENSCARG00000059038)	aclya (ENSCARG00000059054)	ENSCARG00000059169	odad4 (ENSCARG00000059259)	dnajc7 (ENSCARG00000060234)	nkiras2 (ENSCARG00000061035)	ENSCARG00000061051	ENSCARG00000061084	csnk1da (ENSCARG00000061105)	slc16a3a (ENSCARG00000061291)	scpep1 (ENSCARG00000061359)
Cyprininae	ANCESTRAL SPECIES	24						ENSGT00390000013973.B.g.a	ENSGT00940000155641.g.a.a	ENSGT00940000156498.g.a.b	ENSGT00940000153469.a.a.k.b	ENSGT00930000151040.a.b.b	ENSGT00390000017405.f	ENSGT00940000160691.d	ENSGT00940000160759.i.b	ENSGT00940000161514.c	ENSGT00500000045140.a.a.c	ENSGT00530000063743.a.j #22	ENSGT00940000164922.g.a.b	ENSGT00940000165444.d	ENSGT00940000154881.c.b.b	ENSGT00510000048410.d	ENSGT00390000007911.`b	ENSGT00940000155338.r.h	ENSGT00940000157943.b.c	ENSGT00940000157202.h.f	ENSGT00940000153173.b.b.c.a.a	ENSGT00940000158799.d.b	ENSGT00940000154971.u.a.f.a.b	ENSGT00940000156363.b.b	ENSGT00390000014272.h	ENSGT00940000164828.e	ENSGT01080000257420.C.b.b.c.a.a
Cyprininae_a	ANCESTRAL SPECIES	113						ENSGT00390000013973.B.g.a	ENSGT00940000155641.g.a.a	ENSGT00940000156498.g.a.b	ENSGT00940000153469.a.a.k.b	ENSGT00930000151040.a.b.b	ENSGT00390000017405.f	ENSGT00940000160691.d	ENSGT00940000160759.i.b	ENSGT00940000161514.c	ENSGT00500000045140.a.a.c	ENSGT00530000063743.a.j #22	ENSGT00940000164922.g.a.b	ENSGT00940000161215	ENSGT00940000160415	ENSGT00940000165444.d	ENSGT00940000154881.c.b.b	ENSGT00510000048410.d	ENSGT00390000007911.`b	ENSGT00940000155338.r.h	ENSGT00940000157943.b.c	ENSGT00940000157202.h.f	ENSGT00940000153173.b.b.c.a.a	ENSGT00940000158799.d.b	ENSGT00940000154971.u.a.f.a.b	ENSGT00940000156363.b.b	ENSGT00390000014272.h
Common carp reference	MODERN SPECIES	1	pigq (ENSCCRG00000021762)	rab40c (ENSCCRG00000057474)	ENSCCRG00000021845	xylt1 (ENSCCRG00000023544)	ENSCCRG00000065833	ENSCCRG00000063466	zgc:153240 (ENSCCRG00000067474)	rhot1a (ENSCCRG00000038596)	ENSCCRG00000045175	ENSCCRG00000045161	ppp4ca (ENSCCRG00000068440)	mapk3 (ENSCCRG00000044044)	gdpd3a (ENSCCRG00000044023)	ypel3 (ENSCCRG00000065600)	ENSCCRG00000043993	rabep2 (ENSCCRG00000034115) #22	atp2a1 (ENSCCRG00000043768)	ENSCCRG00000055692	ENSCCRG00000061206	hsd17b1 (ENSCCRG00000034106)	si:ch73-141c7.1 (ENSCCRG00000034099)	aclya (ENSCCRG00000033443)	ENSCCRG00000059111	odad4 (ENSCCRG00000011388)	dnajc7 (ENSCCRG00000076833)	nkiras2 (ENSCCRG00000079169)	ZNF385C (ENSCCRG00000074735)	dhx58 (ENSCCRG00000065109)	dhx58 (ENSCCRG00000066329)	kat2a (ENSCCRG00000042040)	rab5c (ENSCCRG00000067819)
Golden-line barbel	MODERN SPECIES	26	PIGQ (ENSSGRG00000047211)	rab40c (ENSSGRG00000047210)	ENSSGRG00000047208	xylt1 (ENSSGRG00000047207)	ENSSGRG00000047206	zgc:153240 (ENSSGRG00000047205)	ENSSGRG00000047202	rhot1a (ENSSGRG00000047095)	ENSSGRG00000047092	ppp4ca (ENSSGRG00000046796)	nudt9 (ENSSGRG00000046786)	mapk3 (ENSSGRG00000046444)	gdpd3a (ENSSGRG00000046439)	ypel3 (ENSSGRG00000046436)	ENSSGRG00000046434	rabep2 (ENSSGRG00000046433) #22	atp2a1 (ENSSGRG00000046424)	ENSSGRG00000046420	hsd17b1 (ENSSGRG00000046419)	si:ch73-141c7.1 (ENSSGRG00000046417)	aclya (ENSSGRG00000043531)	ENSSGRG00000043472	odad4 (ENSSGRG00000043470)	ENSSGRG00000043469	odad4 (ENSSGRG00000043464)	ENSSGRG00000043463	nkiras2 (ENSSGRG00000043447)	ZNF385C (ENSSGRG00000043446)	dhx58 (ENSSGRG00000043394)	kat2a (ENSSGRG00000043240)	kcnh4a (ENSSGRG00000043236)
Goldfish	MODERN SPECIES	20	TMC5 (ENSCARG00000028073)	rps15a (ENSCARG00000028050)	ENSCARG00000028042	xylt1 (ENSCARG00000026366)	ENSCARG00000026308	rhot1a (ENSCARG00000022383)	ENSCARG00000022265	ENSCARG00000022234	ENSCARG00000022227	ppp4ca (ENSCARG00000022216)	nudt9 (ENSCARG00000022199)	mapk3 (ENSCARG00000021557)	gdpd3a (ENSCARG00000021480)	ypel3 (ENSCARG00000021467)	ENSCARG00000021452	rabep2 (ENSCARG00000021437) #22	atp2a1 (ENSCARG00000021260)	ENSCARG00000021235	HSPA2 (ENSCARG00000021230)	hsd17b1 (ENSCARG00000021215)	si:ch73-141c7.1 (ENSCARG00000021194)	aclya (ENSCARG00000020899)	ENSCARG00000020866	dnajc7 (ENSCARG00000020669)	nkiras2 (ENSCARG00000020640)	ZNF385C (ENSCARG00000020625)	dhx58 (ENSCARG00000020423)	kat2a (ENSCARG00000019667)	rab5c (ENSCARG00000019616)	kcnh4a (ENSCARG00000019502)	hcrt (ENSCARG00000019481)
Zebrafish	MODERN SPECIES	18	ENSDARG00000013252	xylt1 (ENSDARG00000061248)	rps15a (ENSDARG00000010160)	ENSDARG00000101707	C3H17orf75 (ENSDARG00000061257)	ENSDARG00000103966	rhot1a (ENSDARG00000099996)	ADAP2 (ENSDARG00000070565)	ENSDARG00000070568	ppp4ca (ENSDARG00000070570)	nudt9 (ENSDARG00000087927)	mapk3 (ENSDARG00000070573)	gdpd3a (ENSDARG00000074466)	ypel3 (ENSDARG00000055510)	ENSDARG00000087869	rabep2 (ENSDARG00000061213) #22	hsp70.3 (ENSDARG00000021924)	hsp70.2 (ENSDARG00000092362)	hsp70.1 (ENSDARG00000029688)	foxd7 (ENSDARG00000079699)	atp2a1 (ENSDARG00000020574)	si:dkeyp-69e1.8 (ENSDARG00000055731)	hmgxb4a (ENSDARG00000075783)	ankrd54 (ENSDARG00000055743)	foxred2 (ENSDARG00000061354)	hmox1a (ENSDARG00000027529)	mcm5 (ENSDARG00000019507)	gcat (ENSDARG00000005643)	tom1 (ENSDARG00000104581)	zgc:171844 (ENSDARG00000067813)	mfsd6l (ENSDARG00000014761)
Osteoglossiformes	ANCESTRAL SPECIES	184	ENSGT01000000214789	ENSGT00390000008969	ENSGT00390000016049	ENSGT00940000159632	ENSGT00390000007119 #21	ENSGT00390000015229 #34	ENSGT00530000064242.a #33	ENSGT00940000159141.j.a	ENSGT00940000154308.A.a.a.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000161103.a	ENSGT00390000005976.b #20	ENSGT00940000157795.g.b #28	ENSGT00950000183191.a.a #26	ENSGT00500000045140.a.a.g	ENSGT00530000063743.a #22	ENSGT00940000164922.e
P. kingsleyae	MODERN SPECIES	459	cdipt (ENSPKIG00000018156)	ENSPKIG00000018202	nlk1 (ENSPKIG00000018252)	tlcd3ba (ENSPKIG00000018285)	mvp (ENSPKIG00000018322)	pagr1 (ENSPKIG00000018363)	kif22 (ENSPKIG00000018408)	sgf29 (ENSPKIG00000018503) #34	DOC2A (ENSPKIG00000018583)	ENSPKIG00000018633	ENSPKIG00000018648	ENSPKIG00000018666	spns1 (ENSPKIG00000018690) #20	sh2b1 (ENSPKIG00000018738) #26	ENSPKIG00000018807	rabep2 (ENSPKIG00000018872) #22	ENSPKIG00000018942
Asian bonytongue	MODERN SPECIES	23	pagr1 (ENSSFOG00015032776)	ENSSFOG00015001379	ENSSFOG00015024336	ENSSFOG00015027498	ENSSFOG00015001294 #21	sgf29 (ENSSFOG00015001254) #34	nupr1b (ENSSFOG00015001239) #33	DOC2A (ENSSFOG00015001174)	ENSSFOG00015001144	ENSSFOG00015031086	ENSSFOG00015001092	spns1 (ENSSFOG00015001046) #20	atxn2l (ENSSFOG00015001018) #28	sh2b1 (ENSSFOG00015001003) #26	ENSSFOG00015000985	rabep2 (ENSSFOG00015000975) #22	atp2a1l (ENSSFOG00015000859)	ppp1caa (ENSSFOG00015006388)	cldni (ENSSFOG00015000777)	coro1a (ENSSFOG00015000741)	paqr4a (ENSSFOG00015032833)	ENSSFOG00015000725	ENSSFOG00015000720	cox6a2 (ENSSFOG00015000608)	ENSSFOG00015000553	ENSSFOG00015000516	ELOB (ENSSFOG00015000498)	atp5mf (ENSSFOG00015000480)	bud31 (ENSSFOG00015000452)	pdap1b (ENSSFOG00015027256)	shmt1 (ENSSFOG00015000376)
Reedfish	MODERN SPECIES	3	ENSECRG00000014349	ENSECRG00000014311	ENSECRG00000014280	ENSECRG00000014242	ENSECRG00000014208	ENSECRG00000014184	ENSECRG00000014147	ENSECRG00000014126	ENSECRG00000014085	ENSECRG00000013781	ENSECRG00000013680	ENSECRG00000013649	ENSECRG00000013624	ENSECRG00000013617	ENSECRG00000013603	ENSECRG00000013573 #22	atp2a1l (ENSECRG00000013287)	ENSECRG00000013087	tufm (ENSECRG00000013039) #27	ppp1caa (ENSECRG00000012986)	MTO1 (ENSECRG00000012935)	sh2b1 (ENSECRG00000012919) #26	ATXN2L (ENSECRG00000012897) #28	cldni (ENSECRG00000012883)	coro1a (ENSECRG00000012870)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063743.a #22
Hagfish	MODERN SPECIES	1444													ENSEBUG00000001938	rfc2 (ENSEBUG00000010622)	ENSEBUG00000008090 ##22	ENSEBUG00000011749 #22	ENSEBUG00000013913	ENSEBUG00000011341
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063743.b ##22
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063743.b.a ##22
Lamprey	MODERN SPECIES	4042																ENSPMAG00000003361 ##22
Hagfish	MODERN SPECIES	1444														ENSEBUG00000001938	rfc2 (ENSEBUG00000010622)	ENSEBUG00000008090 ##22	ENSEBUG00000011749 #22	ENSEBUG00000013913	ENSEBUG00000011341
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063743.b.b ##22
Lamprey	MODERN SPECIES	2681																rabep1 (ENSPMAG00000009400) ##22	ENSPMAG00000009393
Gnathostomata	ANCESTRAL SPECIES	582																ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00940000154890.a
Euteleostomi	ANCESTRAL SPECIES	124									ENSGT00950000183191.a.b ##26	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000013187	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20	ENSGT00390000017457
Actinopterygii	ANCESTRAL SPECIES	100	ENSGT00940000156747	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20	ENSGT00390000017457	ENSGT00390000013187	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00940000157641	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000160349	ENSGT00940000159414	ENSGT00940000159426	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344
Neopterygii	ANCESTRAL SPECIES	98	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20	ENSGT00940000153556.B	ENSGT00940000162978.a.a.b	ENSGT00940000166102	ENSGT00390000013187	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003
Osteoglossocephalai	ANCESTRAL SPECIES	7	ENSGT00940000174983	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20	ENSGT00940000153556.B	ENSGT00940000162978.a.a.b	ENSGT00940000166102	ENSGT00390000013187	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a
Otomorpha	ANCESTRAL SPECIES	245													ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a
Otophysi	ANCESTRAL SPECIES	27	ENSGT00940000177774	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00940000178427	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a
Characiphysae	ANCESTRAL SPECIES	56	ENSGT00440000039324.d	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00940000178427	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a
Characiphysae_b	ANCESTRAL SPECIES	56	ENSGT00440000039324.d	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00940000178427	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a
Characoidei	ANCESTRAL SPECIES	81	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00940000178427	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000155838.f	ENSGT00940000163149.b.d	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758
Red-bellied piranha	MODERN SPECIES	2	HEPACAM (ENSPNAG00000003371)	ENSPNAG00000015153	slc37a2 (ENSPNAG00000015158)	ENSPNAG00000006902	OAF (ENSPNAG00000015227)	pou2f3 (ENSPNAG00000015295)	zgc:194948 (ENSPNAG00000015313)	foxr1 (ENSPNAG00000015339)	cenatac (ENSPNAG00000015376)	ENSPNAG00000006419	tlcd5b (ENSPNAG00000015472)	ENSPNAG00000015555	ENSPNAG00000015619	mis12 (ENSPNAG00000015631)	derl2 (ENSPNAG00000015646)	rabep1 (ENSPNAG00000015790) ##22	nup88 (ENSPNAG00000015864)	ENSPNAG00000015881	prkrip1 (ENSPNAG00000015892)	upk3b (ENSPNAG00000015903)	rasa4 (ENSPNAG00000016000)	CLIP2 (ENSPNAG00000016097)	GTF2IRD1 (ENSPNAG00000016193)	dtx2 (ENSPNAG00000003410)	ENSPNAG00000016282	tmem132e (ENSPNAG00000016294)	lig3 (ENSPNAG00000016405)	rad51d (ENSPNAG00000016418)	tmem248 (ENSPNAG00000016443)	DOC2B (ENSPNAG00000016487)	SYMPK (ENSPNAG00000016505)
Mexicana tetra	MODERN SPECIES	18	HEPACAM (ENSAMXG00000029628)	ENSAMXG00000007389	slc37a2 (ENSAMXG00000007394)	ENSAMXG00000007396	OAF (ENSAMXG00000033094)	pou2f3 (ENSAMXG00000007403)	zgc:194948 (ENSAMXG00000043400)	foxr1 (ENSAMXG00000007405)	cenatac (ENSAMXG00000007407)	ENSAMXG00000007413	tlcd5b (ENSAMXG00000035980)	ENSAMXG00000007431	ENSAMXG00000007439	mis12 (ENSAMXG00000032886)	derl2 (ENSAMXG00000032947)	rabep1 (ENSAMXG00000007454) ##22	nup88 (ENSAMXG00000007459)	ENSAMXG00000034957	prkrip1 (ENSAMXG00000032202)	upk3b (ENSAMXG00000007471)	rasa4 (ENSAMXG00000007473)	CLIP2 (ENSAMXG00000007478)	GTF2IRD1 (ENSAMXG00000007482)	dtx2 (ENSAMXG00000007486)	ENSAMXG00000037591	ENSAMXG00000033138	tmem132e (ENSAMXG00000007488)	ENSAMXG00000029351	ENSAMXG00000038139	lig3 (ENSAMXG00000007489)	rad51d (ENSAMXG00000007491)
Electric eel	MODERN SPECIES	249	drd2b (ENSEEEG00000005115)	nrgna (ENSEEEG00000005114)	HEPACAM (ENSEEEG00000005112)	ENSEEEG00000005109	slc37a2 (ENSEEEG00000005105)	ENSEEEG00000004953	OAF (ENSEEEG00000004947)	pou2f3 (ENSEEEG00000004946)	foxr1 (ENSEEEG00000004944)	cenatac (ENSEEEG00000004942)	ENSEEEG00000004933	tlcd5b (ENSEEEG00000004930)	ENSEEEG00000004926	mis12 (ENSEEEG00000004923)	derl2 (ENSEEEG00000004916)	rabep1 (ENSEEEG00000004821) ##22	nup88 (ENSEEEG00000004778)	ENSEEEG00000004767	prkrip1 (ENSEEEG00000004760)	rasa4 (ENSEEEG00000004514)	CLIP2 (ENSEEEG00000004503)	GTF2IRD1 (ENSEEEG00000004501)	dtx2 (ENSEEEG00000004499)
Channel catfish	MODERN SPECIES	20	nrgn (ENSIPUG00000022705)	HEPACAM (ENSIPUG00000022707)	ccdc15 (ENSIPUG00000022718)	slc37a2 (ENSIPUG00000022721)	ENSIPUG00000022740	OAF (ENSIPUG00000022760)	Pou2f3 (ENSIPUG00000022763)	upk2 (ENSIPUG00000022783)	foxr1 (ENSIPUG00000022784)	CCDC84 (ENSIPUG00000022787)	ENSIPUG00000022803	tlcd5b (ENSIPUG00000022853)	ENSIPUG00000022855	Mis12 (ENSIPUG00000022877)	derl2 (ENSIPUG00000022880)	rabep1 (ENSIPUG00000022889) ##22	nup88 (ENSIPUG00000022963)	vps37d (ENSIPUG00000022978)	prkrip1 (ENSIPUG00000022982)	upk3b (ENSIPUG00000023005)	rasa4 (ENSIPUG00000023009)	clip2 (ENSIPUG00000023046)	gtf2ird1 (ENSIPUG00000023074)	dtx2 (ENSIPUG00000023083)	tmem132e (ENSIPUG00000023899)	ins (ENSIPUG00000023907)	ENSIPUG00000023909	ENSIPUG00000023910	ENSIPUG00000023914	ENSIPUG00000023915	ENSIPUG00000023916
Cyprinoidei	ANCESTRAL SPECIES	37	ENSGT00940000177774	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00940000178427	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997.a	ENSGT00390000006208.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00940000177774	ENSGT01100000263551.a.a.b	ENSGT00500000044966.a	ENSGT00940000158657.b	ENSGT00940000155587.a.a.a.b	ENSGT00390000012008.a	ENSGT00940000157627.c	ENSGT00940000178427	ENSGT00940000162993.h	ENSGT00390000007799.c.a.a	ENSGT00940000157662.g.a.g	ENSGT00390000008162.e.a	ENSGT00940000155838.f.c	ENSGT00390000018665.w	ENSGT00530000063156.a.a.a.d	ENSGT00530000063743.b.c ##22	ENSGT00390000015063.d	ENSGT00950000183012.B.a.e	ENSGT00390000005003.f	ENSGT00940000160149.i	ENSGT00940000159426.m	ENSGT00940000159414.c.b	ENSGT00940000157641.m	ENSGT00940000158479.d	ENSGT00940000156492.i	ENSGT00940000159095.i	ENSGT00940000153883.b.g	ENSGT00940000156758.`b.a.a.b	ENSGT00940000173997.a	ENSGT00940000156758.`b.a.b	ENSGT00390000006208.a.g
Goldfish	MODERN SPECIES	44	drd2b (ENSCARG00000003228)	ENSCARG00000003219	HEPACAM (ENSCARG00000003214)	ENSCARG00000003188	slc37a2 (ENSCARG00000003054)	ENSCARG00000002714	OAF (ENSCARG00000002677)	pou2f3 (ENSCARG00000002673)	zgc:194948 (ENSCARG00000002669)	cenatac (ENSCARG00000002662)	ENSCARG00000001674	tlcd5b (ENSCARG00000001580)	ENSCARG00000001575	mis12 (ENSCARG00000001572)	derl2 (ENSCARG00000001566)	rabep1 (ENSCARG00000001259) ##22	nup88 (ENSCARG00000001194)	ENSCARG00000001188	rasa4 (ENSCARG00000001009)	CLIP2 (ENSCARG00000000676)	GTF2IRD1 (ENSCARG00000000591)	dtx2 (ENSCARG00000000583)	ENSCARG00000000578	TIMM22 (ENSCARG00000000572)	SPECC1 (ENSCARG00000000568)	adora2b (ENSCARG00000000563)	zswim7 (ENSCARG00000000557)	ENSCARG00000000551	ABR (ENSCARG00000000427)	aspa (ENSCARG00000000328)	zgc:85789 (ENSCARG00000000318)
Cyprininae_a	ANCESTRAL SPECIES	75	ENSGT00940000155539.a.a.m.a	ENSGT00440000039324.d	ENSGT01100000263551.a.a.b	ENSGT00500000044966.a	ENSGT00940000158657.a	ENSGT00940000155587.a.a.a.b	ENSGT00940000157627.c	ENSGT00940000178427	ENSGT00940000162993.h	ENSGT00390000007799.c.a.a	ENSGT00940000157662.g.a.g	ENSGT00390000008162.e.a	ENSGT00940000155838.f.c	ENSGT00390000018665.w	ENSGT00530000063156.a.a.a.d	ENSGT00530000063743.b.c ##22	ENSGT00390000015063.d	ENSGT00950000183012.B.a.e	ENSGT00390000005003.f	ENSGT00940000153392.b.b.j	ENSGT00940000160149.i	ENSGT00940000159426.m	ENSGT00940000159414.c.b	ENSGT00940000157641.m	ENSGT00940000158479.d	ENSGT00940000156492.i	ENSGT00940000159095.i.b	ENSGT00940000153883.b.g	ENSGT00940000156758.`b.a.a.b	ENSGT00940000173997.a	ENSGT00940000156758.`b.a.b
Common carp reference	MODERN SPECIES	7	ENSCCRG00000073406	drd2b (ENSCCRG00000066929)	nrgna (ENSCCRG00000077639)	ENSCCRG00000003259	ENSCCRG00000003396	ENSCCRG00000009086	pou2f3 (ENSCCRG00000018695)	zgc:194948 (ENSCCRG00000063998)	foxr1 (ENSCCRG00000050737)	cenatac (ENSCCRG00000050738)	ENSCCRG00000040890	tlcd5b (ENSCCRG00000079021)	ENSCCRG00000006247	mis12 (ENSCCRG00000074215)	derl2 (ENSCCRG00000053596)	rabep1 (ENSCCRG00000029673) ##22	nup88 (ENSCCRG00000029664)	ENSCCRG00000054828	prkrip1 (ENSCCRG00000018890)	upk3b (ENSCCRG00000064656)	rasa4 (ENSCCRG00000026526)	ENSCCRG00000068514	ENSCCRG00000026679	ENSCCRG00000075577	dtx2 (ENSCCRG00000028202)	ENSCCRG00000065084	ENSCCRG00000068351	ENSCCRG00000074686	tmem132e (ENSCCRG00000046437)	lig3 (ENSCCRG00000077154)	rad51d (ENSCCRG00000070560)
Golden-line barbel	MODERN SPECIES	779														mis12 (ENSSGRG00000031128)	derl2 (ENSSGRG00000031126)	rabep1 (ENSSGRG00000030477) ##22	nup88 (ENSSGRG00000030407)	ENSSGRG00000030406	prkrip1 (ENSSGRG00000030405)	rasa4 (ENSSGRG00000030367)	CLIP2 (ENSSGRG00000030366)	dtx2 (ENSSGRG00000030359)	ENSSGRG00000030358
Cyprininae	ANCESTRAL SPECIES	162	ENSGT00950000182952.A.a.b	ENSGT00990000204269.d	ENSGT00940000155539.a.a.m.b	ENSGT01100000263551.a.a.a	ENSGT00500000044966.b	ENSGT00940000158657.a	ENSGT00940000155587.a.a.a.a	ENSGT00940000157627.d	ENSGT00940000162993.g	ENSGT00390000007799.d	ENSGT00940000157662.g.a.h	ENSGT00390000008162.e.b	ENSGT00940000155838.f.d	ENSGT00390000018665.x	ENSGT00530000063156.a.a.a.c	ENSGT00530000063743.b.d ##22	ENSGT00390000015063.c	ENSGT00950000183012.B.a.f	ENSGT00390000005003.e	ENSGT00940000153392.b.b	ENSGT00940000160149.j	ENSGT00940000159426.n	ENSGT00940000159414.c.a	ENSGT00940000157641.n	ENSGT00940000158479.c	ENSGT00940000156492.j	ENSGT00940000159095.j	ENSGT00940000153883.b.h	ENSGT00940000156758.ab	ENSGT00940000164249.b.a.b.a.a.k.b.a.b	ENSGT00390000006208.a.h
Goldfish	MODERN SPECIES	23	ENSCARG00000024549	drd2b (ENSCARG00000024532)	nrgna (ENSCARG00000024510)	HEPACAM (ENSCARG00000024503)	ENSCARG00000024493	slc37a2 (ENSCARG00000024191)	ENSCARG00000024159	pou2f3 (ENSCARG00000024085)	foxr1 (ENSCARG00000024075)	cenatac (ENSCARG00000024061)	ENSCARG00000022317	tlcd5b (ENSCARG00000022245)	ENSCARG00000022208	mis12 (ENSCARG00000022196)	derl2 (ENSCARG00000022190)	rabep1 (ENSCARG00000020618) ##22	nup88 (ENSCARG00000020528)	ENSCARG00000020518	prkrip1 (ENSCARG00000020510)	rasa4 (ENSCARG00000019795)	CLIP2 (ENSCARG00000018706)	GTF2IRD1 (ENSCARG00000018662)	dtx2 (ENSCARG00000018646)	tmem132e (ENSCARG00000018627)	lig3 (ENSCARG00000018437)	rad51d (ENSCARG00000018365)	tmem248 (ENSCARG00000018347)	ENSCARG00000018339	DOC2B (ENSCARG00000018302)	ENSCARG00000018280	ENSCARG00000018267
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00390000001844.a.b.a.a.b	ENSGT00950000182952.A.a.b	ENSGT00990000204269.d	ENSGT00940000155539.a.a.m.b	ENSGT01100000263551.a.a.a	ENSGT00940000155587.a.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627.d	ENSGT00940000162993.g	ENSGT00390000007799.d	ENSGT00940000157662.g.a.h	ENSGT00390000008162.e.b	ENSGT00940000155838.f.d	ENSGT00390000018665.x	ENSGT00530000063156.a.a.a.c	ENSGT00530000063743.b.d ##22	ENSGT00390000015063.c	ENSGT00950000183012.B.a.f	ENSGT00390000005003.e	ENSGT00940000153392.b.b.i	ENSGT00940000160149.j	ENSGT00940000159426.n	ENSGT00940000159414.c.a	ENSGT00940000157641.n	ENSGT00940000158479.c	ENSGT00940000156492.j	ENSGT00940000159095.j	ENSGT00940000153883.b.h	ENSGT00940000156758.ab	ENSGT00940000164249.b.a.b.a.a.k.b.a.b	ENSGT00390000006208.a.h
Common carp reference	MODERN SPECIES	15	ENSCCRG00000059471	nrgna (ENSCCRG00000050718)	ENSCCRG00000050721	slc37a2 (ENSCCRG00000024608)	ENSCCRG00000024634	ENSCCRG00000081782	pou2f3 (ENSCCRG00000025122)	foxr1 (ENSCCRG00000040825)	cenatac (ENSCCRG00000038611)	ENSCCRG00000038630	tlcd5b (ENSCCRG00000077177)	ENSCCRG00000076547	ENSCCRG00000032620	mis12 (ENSCCRG00000064838)	derl2 (ENSCCRG00000067955)	rabep1 (ENSCCRG00000045844) ##22	nup88 (ENSCCRG00000030730)	ENSCCRG00000082137	prkrip1 (ENSCCRG00000026506)	upk3b (ENSCCRG00000026511)	rasa4 (ENSCCRG00000026167)	ENSCCRG00000026469	ENSCCRG00000028198	dtx2 (ENSCCRG00000031438)	ENSCCRG00000069812	ENSCCRG00000035491	tmem132e (ENSCCRG00000082774)	lig3 (ENSCCRG00000053845)	rad51d (ENSCCRG00000007852)	tmem248 (ENSCCRG00000045259)	ENSCCRG00000066524
Golden-line barbel	MODERN SPECIES	290	drd2b (ENSSGRG00000041599)	nrgna (ENSSGRG00000041597)	HEPACAM (ENSSGRG00000041596)	slc37a2 (ENSSGRG00000041043)	ENSSGRG00000040996	OAF (ENSSGRG00000040993)	pou2f3 (ENSSGRG00000040991)	foxr1 (ENSSGRG00000040987)	cenatac (ENSSGRG00000040986)	ENSSGRG00000040975	tlcd5b (ENSSGRG00000040974)	ENSSGRG00000040971	mis12 (ENSSGRG00000040969)	derl2 (ENSSGRG00000040957)	ENSSGRG00000040953	rabep1 (ENSSGRG00000040950) ##22	ENSSGRG00000040945	nup88 (ENSSGRG00000040799)	ENSSGRG00000040796	upk3b (ENSSGRG00000040794)	rasa4 (ENSSGRG00000040792)	CLIP2 (ENSSGRG00000040786)	ENSSGRG00000040785	dtx2 (ENSSGRG00000040778)
Zebrafish	MODERN SPECIES	20	nrgna (ENSDARG00000039626)	HEPACAM (ENSDARG00000112032)	ENSDARG00000067517	slc37a2 (ENSDARG00000023394)	ENSDARG00000108939	OAF (ENSDARG00000077107)	pou2f3 (ENSDARG00000052387)	zgc:194948 (ENSDARG00000103164)	foxr1 (ENSDARG00000004864)	cenatac (ENSDARG00000059606)	ENSDARG00000100913	tlcd5b (ENSDARG00000035163)	ENSDARG00000089643	mis12 (ENSDARG00000026454)	derl2 (ENSDARG00000042401)	rabep1 (ENSDARG00000059600) ##22	nup88 (ENSDARG00000003235)	ENSDARG00000097055	prkrip1 (ENSDARG00000033126)	upk3b (ENSDARG00000092872)	rasa4 (ENSDARG00000029372)	CLIP2 (ENSDARG00000059596)	GTF2IRD1 (ENSDARG00000022203)	dtx2 (ENSDARG00000032933)	ENSDARG00000094771	tmem132e (ENSDARG00000090830)	lig3 (ENSDARG00000052553)	rad51d (ENSDARG00000026400)	tmem248 (ENSDARG00000018825)	DOC2B (ENSDARG00000088293)	ENSDARG00000044290
Clupeiformes	ANCESTRAL SPECIES	134													ENSGT00940000155838.f	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641.p	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00940000173997	ENSGT00390000006208.a	ENSGT00940000157317
Denticle herring	MODERN SPECIES	263	rasa4 (ENSDCDG00000010958)	ENSDCDG00000010922	ENSDCDG00000010913	ENSDCDG00000010908	ENSDCDG00000010902	ENSDCDG00000010898	NAPA (ENSDCDG00000010884)	ENSDCDG00000010877	ENSDCDG00000010874	SYMPK (ENSDCDG00000010307)	ENSDCDG00000010274	ENSDCDG00000010268	ENSDCDG00000010263	mis12 (ENSDCDG00000010255)	derl2 (ENSDCDG00000010243)	rabep1 (ENSDCDG00000009983) ##22	ENSDCDG00000009955	prkrip1 (ENSDCDG00000019637)	upk3b (ENSDCDG00000019634)	rasa4 (ENSDCDG00000019562)	CLIP2 (ENSDCDG00000019518)	GTF2IRD1 (ENSDCDG00000019483)	ENSDCDG00000019477	dtx2 (ENSDCDG00000019469)	tmem132e (ENSDCDG00000019454)	ENSDCDG00000019443	CLDN4 (ENSDCDG00000019438)	CLDN4 (ENSDCDG00000019418)	ENSDCDG00000019414	mettl27 (ENSDCDG00000019411)	nf2b (ENSDCDG00000019408)
Euteleosteomorpha	ANCESTRAL SPECIES	362														ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00940000156536.e.a	ENSGT00940000156648.d	ENSGT00390000015655.a.m.b	ENSGT00940000159782.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00820000127055.a.b	ENSGT00940000154495.a.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000155545.b	ENSGT00950000183155.a.a.a.b	ENSGT00530000063405.b.f	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426	ENSGT00940000157126.f	ENSGT00390000009255	ENSGT00940000164937.a.b	ENSGT00940000156649.c.b	ENSGT00950000183181.B.b.l.a
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Percomorphaceae	ANCESTRAL SPECIES	40	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426.p
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426.p
Seriola	ANCESTRAL SPECIES	2	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c.m	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426.p
Greater amberjack	MODERN SPECIES	15			elmod1 (ENSSDUG00000007392)	slc35f2 (ENSSDUG00000007412)	CUL5 (ENSSDUG00000007449)	CAPN5 (ENSSDUG00000007506)	ompb (ENSSDUG00000007534)	MYO7A (ENSSDUG00000007550)	ENSSDUG00000007655	AQP11 (ENSSDUG00000007727)	ENSSDUG00000007741	FCHSD2 (ENSSDUG00000007822)	foxred1 (ENSSDUG00000007926)	kcnj1b (ENSSDUG00000007971)	ENSSDUG00000007984	rabep1 (ENSSDUG00000008003) ##22	mpzl1l (ENSSDUG00000008060)	ENSSDUG00000008067	emsy (ENSSDUG00000008095)	ENSSDUG00000008245	tlcd5b (ENSSDUG00000008328)	rcc1l (ENSSDUG00000008345)	castor2 (ENSSDUG00000008391)	DOC2B (ENSSDUG00000008423)	tmem248 (ENSSDUG00000008448)	lig3 (ENSSDUG00000008477)	rad51d (ENSSDUG00000008515)	tmem132e (ENSSDUG00000008532)	dtx2 (ENSSDUG00000008583)	GTF2IRD1 (ENSSDUG00000008617)	CLIP2 (ENSSDUG00000008687)
Yellowtail amberjack	MODERN SPECIES	3202									AQP11 (ENSSLDG00000004065)	ENSSLDG00000003957	FCHSD2 (ENSSLDG00000003884)	ENSSLDG00000003849	foxred1 (ENSSLDG00000003787)	kcnj1b (ENSSLDG00000003772)	ENSSLDG00000003751	rabep1 (ENSSLDG00000003669) ##22	mpzl1l (ENSSLDG00000003637)	ENSSLDG00000003630	emsy (ENSSLDG00000003313)	ENSSLDG00000003171	tlcd5b (ENSSLDG00000003152)	rcc1l (ENSSLDG00000003094)	castor2 (ENSSLDG00000003053)	DOC2B (ENSSLDG00000002982)	tmem248 (ENSSLDG00000002944)	lig3 (ENSSLDG00000002837)	rad51d (ENSSLDG00000002734)	tmem132e (ENSSLDG00000002704)	dtx2 (ENSSLDG00000002677)	GTF2IRD1 (ENSSLDG00000002437)	CLIP2 (ENSSLDG00000002285)
Barramundi perch	MODERN SPECIES	94	ENSLCAG00010010259	ENSLCAG00010010258	ENSLCAG00010010256	ompb (ENSLCAG00010010254)	CAPN5 (ENSLCAG00010010238)	MYO7A (ENSLCAG00010009935)	ENSLCAG00010009855	ENSLCAG00010009852	AQP11 (ENSLCAG00010009851)	ENSLCAG00010009849	FCHSD2 (ENSLCAG00010009768)	foxred1 (ENSLCAG00010009701)	kcnj1b (ENSLCAG00010009690)	ENSLCAG00010009688	ENSLCAG00010009687	rabep1 (ENSLCAG00010009583) ##22	mpzl1l (ENSLCAG00010009553)	ENSLCAG00010009547	emsy (ENSLCAG00010009535)	ENSLCAG00010009376	tlcd5b (ENSLCAG00010009340)	rcc1l (ENSLCAG00010009331)
Pleuronectoidei	ANCESTRAL SPECIES	32	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426.p
Turbot	MODERN SPECIES	16	ENSSMAG00000015736	ENSSMAG00000015721	ENSSMAG00000015686	ENSSMAG00000015644	slc35f2 (ENSSMAG00000015633)	ENSSMAG00000015509	ompb (ENSSMAG00000015574)	MYO7A (ENSSMAG00000015416)	ENSSMAG00000032239	ENSSMAG00000015371	ENSSMAG00000015302	ENSSMAG00000015221	ENSSMAG00000015191	ENSSMAG00000015180	ENSSMAG00000015173	ENSSMAG00000015049 ##22	mpzl1l (ENSSMAG00000015032)	ENSSMAG00000032956	emsy (ENSSMAG00000015001)	ENSSMAG00000035998	ENSSMAG00000014991	rcc1l (ENSSMAG00000014964)	castor2 (ENSSMAG00000031872)	ENSSMAG00000024921	ENSSMAG00000014938	tmem248 (ENSSMAG00000014905)	ENSSMAG00000014823	ENSSMAG00000014791	ENSSMAG00000014753	ENSSMAG00000014709	ENSSMAG00000014686
Tongue sole	MODERN SPECIES	10	ENSCSEG00000015677	gria4b (ENSCSEG00000015575)	elmod1 (ENSCSEG00000015527)	slc35f2 (ENSCSEG00000015491)	CUL5 (ENSCSEG00000015456)	ompb (ENSCSEG00000015444)	CAPN5 (ENSCSEG00000015427)	MYO7A (ENSCSEG00000015251)	ENSCSEG00000015202	ENSCSEG00000015230	ENSCSEG00000015171	FCHSD2 (ENSCSEG00000015081)	foxred1 (ENSCSEG00000015059)	kcnj1b (ENSCSEG00000015056)	ENSCSEG00000015046	rabep1 (ENSCSEG00000015015) ##22	mpzl1l (ENSCSEG00000014998)	ENSCSEG00000014996	emsy (ENSCSEG00000014978)	ENSCSEG00000014864	tlcd5b (ENSCSEG00000014847)	rcc1l (ENSCSEG00000014772)	castor2 (ENSCSEG00000014753)	DOC2B (ENSCSEG00000014740)	tmem248 (ENSCSEG00000014724)	lig3 (ENSCSEG00000014666)	RAD51D (ENSCSEG00000014639)	ENSCSEG00000014634	ENSCSEG00000014628	f11r.1 (ENSCSEG00000014619)	ENSCSEG00000014608
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Climbing perch	MODERN SPECIES	5	ENSATEG00000000528	ENSATEG00000000466	elmod1 (ENSATEG00000000421)	slc35f2 (ENSATEG00000000410)	ENSATEG00000000395	ompb (ENSATEG00000000380)	CAPN5 (ENSATEG00000000315)	MYO7A (ENSATEG00000000073)	GDPD4 (ENSATEG00000000053)	ENSATEG00000023313	ENSATEG00000023296	ENSATEG00000023272	ENSATEG00000023255	ENSATEG00000023244	ENSATEG00000023239	ENSATEG00000023217 ##22	mpzl1l (ENSATEG00000029159)	ENSATEG00000023203	emsy (ENSATEG00000023194)	ENSATEG00000026928	ENSATEG00000023177	rcc1l (ENSATEG00000023157)	castor2 (ENSATEG00000023144)	ENSATEG00000023135	tmem248 (ENSATEG00000023124)	ENSATEG00000023092	ENSATEG00000023087	ENSATEG00000023074	ENSATEG00000023058	ENSATEG00000027940	ENSATEG00000022547
Siamese fighting fish	MODERN SPECIES	5	ywhae2 (ENSBSLG00000013175)	ENSBSLG00000013482	elmod1 (ENSBSLG00000014921)	slc35f2 (ENSBSLG00000014935)	CUL5 (ENSBSLG00000014944)	CAPN5 (ENSBSLG00000015069)	ompb (ENSBSLG00000015121)	MYO7A (ENSBSLG00000015124)	ENSBSLG00000015677	AQP11 (ENSBSLG00000015706)	ENSBSLG00000015712	FCHSD2 (ENSBSLG00000015745)	foxred1 (ENSBSLG00000015901)	kcnj1b (ENSBSLG00000015983)	ENSBSLG00000015986	rabep1 (ENSBSLG00000016006) ##22	mpzl1l (ENSBSLG00000016417)	ENSBSLG00000016421	emsy (ENSBSLG00000016423)	ENSBSLG00000016441	tlcd5b (ENSBSLG00000016467)	rcc1l (ENSBSLG00000016472)	castor2 (ENSBSLG00000016483)	DOC2B (ENSBSLG00000016488)	ENSBSLG00000016500	tmem248 (ENSBSLG00000016504)	lig3 (ENSBSLG00000016516)	rad51d (ENSBSLG00000016721)	tmem132e (ENSBSLG00000016891)	dtx2 (ENSBSLG00000016964)	GTF2IRD1 (ENSBSLG00000017004)
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000025128	ENSMAMG00000002020	elmod1 (ENSMAMG00000001980)	slc35f2 (ENSMAMG00000001954)	ENSMAMG00000001854	ompb (ENSMAMG00000001842)	ENSMAMG00000001817	ENSMAMG00000001667	ENSMAMG00000001646	ENSMAMG00000001623	ENSMAMG00000001547	ENSMAMG00000001495	ENSMAMG00000001452	ENSMAMG00000001430	ENSMAMG00000001418	ENSMAMG00000001354 ##22	mpzl1l (ENSMAMG00000027186)	ENSMAMG00000026881	emsy (ENSMAMG00000001261)	ENSMAMG00000001216	ENSMAMG00000001187	rcc1l (ENSMAMG00000001100)	castor2 (ENSMAMG00000001064)	ENSMAMG00000001008	tmem248 (ENSMAMG00000026845)	ENSMAMG00000000900	ENSMAMG00000000850	ENSMAMG00000000833	ENSMAMG00000000774	ENSMAMG00000000721	ENSMAMG00000000615
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Tetraodontidae	ANCESTRAL SPECIES	57	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00530000063816.c.a	ENSGT00530000064411.b.j	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002372	ENSTNIG00000001464	CRK (ENSTNIG00000002371)	ywhae2 (ENSTNIG00000002370)	gria4b (ENSTNIG00000002369)	elmod1 (ENSTNIG00000019599)	ncam1a (ENSTNIG00000003848)	slc35f2 (ENSTNIG00000003710)	cul5a (ENSTNIG00000003711)	CAPN5 (ENSTNIG00000003712)	MYO7A (ENSTNIG00000003713)	ENSTNIG00000003714	FCHSD2 (ENSTNIG00000003715)	foxred1 (ENSTNIG00000003767)	kcnj1b (ENSTNIG00000003768)	rabep1 (ENSTNIG00000004174) ##22	ENSTNIG00000005487	ENSTNIG00000002907	MARCHF9 (ENSTNIG00000002908)	agap2 (ENSTNIG00000002909)	ZBTB39 (ENSTNIG00000002910)	ENSTNIG00000002912	ENSTNIG00000002913	igfbp6b (ENSTNIG00000002914)	spryd3 (ENSTNIG00000002915)	lima1a (ENSTNIG00000002916)	commd7 (ENSTNIG00000006822)	dnmt3bb.1 (ENSTNIG00000006823)	dnmt3bb.1 (ENSTNIG00000006824)	ENSTNIG00000006825	mapre1b (ENSTNIG00000006826)
Fugu	MODERN SPECIES	6	ENSTRUG00000027293	CRK (ENSTRUG00000011971)	ywhae2 (ENSTRUG00000030321)	gria4b (ENSTRUG00000011517)	elmod1 (ENSTRUG00000011350)	slc35f2 (ENSTRUG00000011198)	cul5a (ENSTRUG00000010860)	CAPN5 (ENSTRUG00000010580)	ompb (ENSTRUG00000024676)	ENSTRUG00000010002	ENSTRUG00000009902	FCHSD2 (ENSTRUG00000009588)	foxred1 (ENSTRUG00000009457)	kcnj1b (ENSTRUG00000009385)	ENSTRUG00000009343	rabep1 (ENSTRUG00000009248) ##22	mpzl1l (ENSTRUG00000009115)	ndfip1l (ENSTRUG00000008999)	endou2 (ENSTRUG00000008965)	rnf14 (ENSTRUG00000008815)	hspa4a (ENSTRUG00000008366)	zcchc10 (ENSTRUG00000023781)	AFF4 (ENSTRUG00000008087)	ENSTRUG00000020132	SOWAHA (ENSTRUG00000033404)	ENSTRUG00000025743	GABRG2 (ENSTRUG00000006533)	gabra1 (ENSTRUG00000005997)	GABRB2 (ENSTRUG00000002628)	SH3PXD2B (ENSTRUG00000001823)	stk10 (ENSTRUG00000001369)
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Ballan wrasse	MODERN SPECIES	273					CAPN5 (ENSLBEG00000025315)	MYO7A (ENSLBEG00000025398)	GDPD4 (ENSLBEG00000025490)	AQP11 (ENSLBEG00000025513)	ENSLBEG00000025539	FCHSD2 (ENSLBEG00000025605)	ENSLBEG00000025639	foxred1 (ENSLBEG00000025655)	kcnj1b (ENSLBEG00000025676)	ENSLBEG00000025688	ENSLBEG00000025701	rabep1 (ENSLBEG00000025724) ##22	mpzl1l (ENSLBEG00000025782)	ENSLBEG00000025799	emsy (ENSLBEG00000025814)	ENSLBEG00000025882	tlcd5b (ENSLBEG00000025986)	rcc1l (ENSLBEG00000026004)	castor2 (ENSLBEG00000026038)	DOC2B (ENSLBEG00000026081)	tmem248 (ENSLBEG00000026117)	lig3 (ENSLBEG00000026219)	rad51d (ENSLBEG00000026302)	tmem132e (ENSLBEG00000026322)
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Perciformes	ANCESTRAL SPECIES	26	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Cottioidei	ANCESTRAL SPECIES	70	ENSGT00940000159536	ENSGT00940000157695	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b	ENSGT00950000183064.b	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Lumpfish	MODERN SPECIES	5	ENSCLMG00005013216	sgcd (ENSCLMG00005013219)	mrpl22 (ENSCLMG00005013221)	GEMIN5 (ENSCLMG00005013231)	ponzr2 (ENSCLMG00005013246)	HAND1 (ENSCLMG00005013249)	sap30l (ENSCLMG00005013254)	GALNT10 (ENSCLMG00005013256)	ENSCLMG00005013714	GALNT10 (ENSCLMG00005013715)	MFAP3 (ENSCLMG00005013717)	FAM114A2 (ENSCLMG00005013719)	ENSCLMG00005013725	cnot8 (ENSCLMG00005013727)	ENSCLMG00005013729	rabep1 (ENSCLMG00005013783) ##22	mpzl1l (ENSCLMG00005015203)	ENSCLMG00005015204	emsy (ENSCLMG00005015206)	mks1 (ENSCLMG00005015207)	zw10 (ENSCLMG00005015213)	ENSCLMG00005015227	ENSCLMG00005015229	tbl2 (ENSCLMG00005015234)	mybbp1a (ENSCLMG00005015238)	ENSCLMG00005015256	psmg1 (ENSCLMG00005015258)	ENSCLMG00005015259	slc37a2 (ENSCLMG00005015275)	ENSCLMG00005016225	JAKMIP2 (ENSCLMG00005016242)
Stickleback	MODERN SPECIES	7	SMG8 (ENSGACG00000020870)	ppm1e (ENSGACG00000020869)	ENSGACG00000020868	TRIM37 (ENSGACG00000020867)	pou2f3 (ENSGACG00000020866)	p4ha2 (ENSGACG00000020865)	pdlim4 (ENSGACG00000020864)	vps26c (ENSGACG00000020863)	ENSGACG00000020862	AQP11 (ENSGACG00000020861)	ENSGACG00000020860	ENSGACG00000020859	FCHSD2 (ENSGACG00000020858)	foxred1 (ENSGACG00000020857)	ENSGACG00000020856	rabep1 (ENSGACG00000020855) ##22	ENSGACG00000020854	emsy (ENSGACG00000020853)	ENSGACG00000020852	tlcd5b (ENSGACG00000020851)	rcc1l (ENSGACG00000020850)	castor2 (ENSGACG00000020849)	DOC2B (ENSGACG00000020848)	tmem248 (ENSGACG00000020847)	lig3 (ENSGACG00000020846)	rad51d (ENSGACG00000020845)	GTF2IRD1 (ENSGACG00000020844)	CLIP2 (ENSGACG00000020843)	rbm41 (ENSGACG00000020842)	klf5l (ENSGACG00000020841)	pou4f4 (ENSGACG00000020840)
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT01000000215988	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Pike perch	MODERN SPECIES	22	ywhae2 (ENSSLUG00000011090)	gria4b (ENSSLUG00000010926)	elmod1 (ENSSLUG00000010894)	slc35f2 (ENSSLUG00000010876)	CUL5 (ENSSLUG00000010739)	ompb (ENSSLUG00000010701)	CAPN5 (ENSSLUG00000010588)	MYO7A (ENSSLUG00000010473)	GDPD4 (ENSSLUG00000010437)	AQP11 (ENSSLUG00000010425)	ENSSLUG00000010413	FCHSD2 (ENSSLUG00000009890)	foxred1 (ENSSLUG00000009775)	kcnj1b (ENSSLUG00000009737)	ENSSLUG00000009721	rabep1 (ENSSLUG00000007194) ##22	mpzl1l (ENSSLUG00000006930)	ENSSLUG00000006923	emsy (ENSSLUG00000006888)	ENSSLUG00000006853	tlcd5b (ENSSLUG00000006841)	rcc1l (ENSSLUG00000006830)	castor2 (ENSSLUG00000006802)	ENSSLUG00000006794	DOC2B (ENSSLUG00000006783)	tmem248 (ENSSLUG00000006767)	lig3 (ENSSLUG00000006348)	rad51d (ENSSLUG00000006279)	tmem132e (ENSSLUG00000006130)	dtx2 (ENSSLUG00000006090)	GTF2IRD1 (ENSSLUG00000006070)
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Gilthead seabream	MODERN SPECIES	4			SPRY3 (ENSSAUG00010011969)	ENSSAUG00010011967	hnrnpaba (ENSSAUG00010011961)	btg4 (ENSSAUG00010011959)	slc25a14 (ENSSAUG00010011952)	GPR119 (ENSSAUG00010011947)	ENSSAUG00010011944	ENSSAUG00010011941	ENSSAUG00010011939	foxred1 (ENSSAUG00010011936)	ENSSAUG00010011932	kcnj1b (ENSSAUG00010011931)	ENSSAUG00010011930	rabep1 (ENSSAUG00010010313) ##22	mpzl1l (ENSSAUG00010010262)	ENSSAUG00010010257	emsy (ENSSAUG00010010248)	tlcd5b (ENSSAUG00010010229)	rcc1l (ENSSAUG00010009910)	ENSSAUG00010009900	tmem248 (ENSSAUG00010009896)	ENSSAUG00010009893	rad51d (ENSSAUG00010009890)	tmem132e (ENSSAUG00010009888)	lig3 (ENSSAUG00010009824)	ENSSAUG00010009817	dtx2 (ENSSAUG00010009816)	GTF2IRD1 (ENSSAUG00010009806)	CLIP2 (ENSSAUG00010009799)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Large yellow croaker	MODERN SPECIES	2	ywhae2 (ENSLCRG00005004273)	gria4b (ENSLCRG00005002153)	elmod1 (ENSLCRG00005002125)	slc35f2 (ENSLCRG00005002122)	CUL5 (ENSLCRG00005000547)	ompb (ENSLCRG00005000544)	CAPN5 (ENSLCRG00005000535)	MYO7A (ENSLCRG00005000522)	GDPD4 (ENSLCRG00005000515)	AQP11 (ENSLCRG00005000514)	ENSLCRG00005000510	FCHSD2 (ENSLCRG00005000506)	foxred1 (ENSLCRG00005000484)	kcnj1b (ENSLCRG00005000480)	ENSLCRG00005000479	rabep1 (ENSLCRG00005000289) ##22	ENSLCRG00005000220	mpzl1l (ENSLCRG00005000209)	ENSLCRG00005000201	emsy (ENSLCRG00005000172)	ENSLCRG00005000117	tlcd5b (ENSLCRG00005000100)	rcc1l (ENSLCRG00005000088)	castor2 (ENSLCRG00005015625)	DOC2B (ENSLCRG00005015574)	tmem248 (ENSLCRG00005015569)	lig3 (ENSLCRG00005015409)	rad51d (ENSLCRG00005015405)	tmem132e (ENSLCRG00005015404)	dtx2 (ENSLCRG00005015402)	GTF2IRD1 (ENSLCRG00005015399)
European seabass	MODERN SPECIES	4	elmod1 (ENSDLAG00005004868)	slc35f2 (ENSDLAG00005004826)	ENSDLAG00005029608	ENSDLAG00005030622	ompb (ENSDLAG00005030150)	CAPN5 (ENSDLAG00005004342)	MYO7A (ENSDLAG00005021005)	ENSDLAG00005020939	GDPD4 (ENSDLAG00005020922)	ENSDLAG00005029942	ENSDLAG00005020900	ENSDLAG00005020844	ENSDLAG00005020696	ENSDLAG00005020682	ENSDLAG00005020674	ENSDLAG00005020223 ##22	mpzl1l (ENSDLAG00005020196)	ENSDLAG00005020183	emsy (ENSDLAG00005020162)	ENSDLAG00005019993	ENSDLAG00005019989	rcc1l (ENSDLAG00005019919)	castor2 (ENSDLAG00005019867)	ENSDLAG00005019763	tmem248 (ENSDLAG00005019738)	lig3 (ENSDLAG00005017783)	ENSDLAG00005017663	ENSDLAG00005017647	ENSDLAG00005017633	ENSDLAG00005017604	ENSDLAG00005017419
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Burton s mouthbrooder	MODERN SPECIES	282	ywhae2 (ENSHBUG00000012708)	gria4b (ENSHBUG00000012754)	elmod1 (ENSHBUG00000012814)	slc35f2 (ENSHBUG00000012868)	CUL5 (ENSHBUG00000012991)	ompb (ENSHBUG00000013019)	CAPN5 (ENSHBUG00000013069)	MYO7A (ENSHBUG00000013188)	GDPD4 (ENSHBUG00000013213)	ENSHBUG00000013243	ENSHBUG00000013341	FCHSD2 (ENSHBUG00000013486)	foxred1 (ENSHBUG00000013505)	kcnj1b (ENSHBUG00000013510)	ENSHBUG00000013532	rabep1 (ENSHBUG00000013663) ##22	mpzl1l (ENSHBUG00000013690)	ENSHBUG00000013703	emsy (ENSHBUG00000013803)	ENSHBUG00000013827	tlcd5b (ENSHBUG00000013844)	rcc1l (ENSHBUG00000013891)	castor2 (ENSHBUG00000013944)	DOC2B (ENSHBUG00000013991)	tmem248 (ENSHBUG00000014025)	lig3 (ENSHBUG00000014105)	rad51d (ENSHBUG00000014121)	tmem132e (ENSHBUG00000014138)	dtx2 (ENSHBUG00000014152)	GTF2IRD1 (ENSHBUG00000014185)	CLIP2 (ENSHBUG00000014278)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
P. nyererei	MODERN SPECIES	310	elmod1 (ENSPNYG00000011122)	slc35f2 (ENSPNYG00000011151)	CUL5 (ENSPNYG00000011193)	CAPN5 (ENSPNYG00000011323)	ompb (ENSPNYG00000011353)	MYO7A (ENSPNYG00000011380)	ENSPNYG00000011471	ENSPNYG00000011495	ENSPNYG00000011524	ENSPNYG00000011536	FCHSD2 (ENSPNYG00000011552)	ENSPNYG00000011581	foxred1 (ENSPNYG00000011608)	kcnj1b (ENSPNYG00000011686)	ENSPNYG00000011703	rabep1 (ENSPNYG00000011756) ##22	ENSPNYG00000011844	mpzl1l (ENSPNYG00000011860)	ENSPNYG00000011873	emsy (ENSPNYG00000011893)	ENSPNYG00000011983	tlcd5b (ENSPNYG00000012027)	rcc1l (ENSPNYG00000012045)	castor2 (ENSPNYG00000012091)	DOC2B (ENSPNYG00000012141)	tmem248 (ENSPNYG00000012181)	lig3 (ENSPNYG00000012229)	rad51d (ENSPNYG00000012287)	tmem132e (ENSPNYG00000012354)	ENSPNYG00000012399	dtx2 (ENSPNYG00000012412)
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Eastern happy	MODERN SPECIES	1	ENSACLG00000022741	elmod1 (ENSACLG00000022760)	slc35f2 (ENSACLG00000022846)	CUL5 (ENSACLG00000022875)	CAPN5 (ENSACLG00000022960)	ompb (ENSACLG00000023024)	ENSACLG00000023038	MYO7A (ENSACLG00000023046)	ENSACLG00000023124	ENSACLG00000023144	ENSACLG00000023168	FCHSD2 (ENSACLG00000023201)	foxred1 (ENSACLG00000023282)	kcnj1b (ENSACLG00000023295)	ENSACLG00000023304	rabep1 (ENSACLG00000023321) ##22	mpzl1l (ENSACLG00000023426)	ENSACLG00000023438	emsy (ENSACLG00000023444)	ENSACLG00000023550	tlcd5b (ENSACLG00000023621)	rcc1l (ENSACLG00000023656)	castor2 (ENSACLG00000023707)	DOC2B (ENSACLG00000023750)	ENSACLG00000023794	ENSACLG00000023808	tmem248 (ENSACLG00000023838)	lig3 (ENSACLG00000023859)	rad51d (ENSACLG00000023916)	tmem132e (ENSACLG00000023926)	dtx2 (ENSACLG00000023976)
Zebra mbuna	MODERN SPECIES	1092	ywhae2 (ENSMZEG00005010829)	gria4b (ENSMZEG00005010846)	elmod1 (ENSMZEG00005010879)	slc35f2 (ENSMZEG00005010904)	CUL5 (ENSMZEG00005010930)	CAPN5 (ENSMZEG00005010960)	ompb (ENSMZEG00005010970)	MYO7A (ENSMZEG00005011034)	ENSMZEG00005011111	ENSMZEG00005011123	ENSMZEG00005011134	FCHSD2 (ENSMZEG00005011163)	foxred1 (ENSMZEG00005011217)	kcnj1b (ENSMZEG00005011231)	ENSMZEG00005011235	rabep1 (ENSMZEG00005011268) ##22	mpzl1l (ENSMZEG00005011307)	ENSMZEG00005011320	emsy (ENSMZEG00005011328)	ENSMZEG00005011352	tlcd5b (ENSMZEG00005011365)	rcc1l (ENSMZEG00005011370)	castor2 (ENSMZEG00005011388)	DOC2B (ENSMZEG00005011406)	tmem248 (ENSMZEG00005011420)	lig3 (ENSMZEG00005011453)	rad51d (ENSMZEG00005011513)	tmem132e (ENSMZEG00005011524)	dtx2 (ENSMZEG00005011536)	GTF2IRD1 (ENSMZEG00005011583)	CLIP2 (ENSMZEG00005011621)
Lyretail cichlid	MODERN SPECIES	297	ywhae2 (ENSNBRG00000013043)	gria4b (ENSNBRG00000013070)	elmod1 (ENSNBRG00000013140)	slc35f2 (ENSNBRG00000013171)	CUL5 (ENSNBRG00000013257)	CAPN5 (ENSNBRG00000013353)	ompb (ENSNBRG00000013376)	MYO7A (ENSNBRG00000013391)	ENSNBRG00000013486	ENSNBRG00000013531	ENSNBRG00000013541	FCHSD2 (ENSNBRG00000013569)	ENSNBRG00000013607	foxred1 (ENSNBRG00000013634)	kcnj1b (ENSNBRG00000013734)	rabep1 (ENSNBRG00000013749) ##22	mpzl1l (ENSNBRG00000013802)	ENSNBRG00000013811	emsy (ENSNBRG00000013848)	ENSNBRG00000013965	tlcd5b (ENSNBRG00000014071)	rcc1l (ENSNBRG00000014086)	castor2 (ENSNBRG00000014104)	DOC2B (ENSNBRG00000014131)	tmem248 (ENSNBRG00000014163)	lig3 (ENSNBRG00000014195)	rad51d (ENSNBRG00000014252)	tmem132e (ENSNBRG00000014305)	dtx2 (ENSNBRG00000014339)	GTF2IRD1 (ENSNBRG00000014348)	CLIP2 (ENSNBRG00000014415)
Nile tilapia	MODERN SPECIES	1	slc35f2 (ENSONIG00000009539)	CUL5 (ENSONIG00000009545)	CAPN5 (ENSONIG00000009550)	ompb (ENSONIG00000021460)	ENSONIG00000027896	MYO7A (ENSONIG00000009556)	ENSONIG00000009570	AQP11 (ENSONIG00000009574)	ENSONIG00000009575	ENSONIG00000032351	ENSONIG00000038404	FCHSD2 (ENSONIG00000013349)	foxred1 (ENSONIG00000013346)	kcnj1b (ENSONIG00000013345)	ENSONIG00000013344	rabep1 (ENSONIG00000013337) ##22	mpzl1l (ENSONIG00000013334)	ENSONIG00000013333	emsy (ENSONIG00000013319)	ENSONIG00000013306	tlcd5b (ENSONIG00000013304)	rcc1l (ENSONIG00000013300)	castor2 (ENSONIG00000013294)	DOC2B (ENSONIG00000030282)	tmem248 (ENSONIG00000013291)	lig3 (ENSONIG00000013282)	rad51d (ENSONIG00000013277)	ENSONIG00000035009	tmem132e (ENSONIG00000013275)	dtx2 (ENSONIG00000013272)	GTF2IRD1 (ENSONIG00000013267)
Midas cichlid	MODERN SPECIES	344	gria4b (ENSACIG00000012893)	elmod1 (ENSACIG00000012935)	slc35f2 (ENSACIG00000012974)	CUL5 (ENSACIG00000013036)	CAPN5 (ENSACIG00000013078)	ompb (ENSACIG00000013111)	MYO7A (ENSACIG00000013121)	ENSACIG00000013215	AQP11 (ENSACIG00000013247)	ENSACIG00000013262	FCHSD2 (ENSACIG00000013308)	ENSACIG00000013347	foxred1 (ENSACIG00000013363)	kcnj1b (ENSACIG00000013421)	ENSACIG00000013430	rabep1 (ENSACIG00000013444) ##22	mpzl1l (ENSACIG00000013477)	ENSACIG00000013488	emsy (ENSACIG00000013498)	ENSACIG00000013556	tlcd5b (ENSACIG00000013657)	rcc1l (ENSACIG00000013668)	castor2 (ENSACIG00000013695)	DOC2B (ENSACIG00000013720)	tmem248 (ENSACIG00000013751)	lig3 (ENSACIG00000013767)	rad51d (ENSACIG00000013804)	tmem132e (ENSACIG00000013851)	dtx2 (ENSACIG00000013875)	GTF2IRD1 (ENSACIG00000013926)	CLIP2 (ENSACIG00000013975)
Pomacentridae	ANCESTRAL SPECIES	57	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Pomacentridae_A	ANCESTRAL SPECIES	65	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Amphiprion	ANCESTRAL SPECIES	71	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00530000064449.A.b.b.t.a.a	ENSGT00390000008162.e	ENSGT00940000159782.b.g	ENSGT00940000155677.b	ENSGT00820000127055.a.b	ENSGT00940000154495.a.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000155545.b	ENSGT00950000183155.a.a.a.b	ENSGT00530000063405.b.f	ENSGT00390000013989.b
Orange clownfish	MODERN SPECIES	6	rcc1l (ENSAPEG00000010470)	slc35f2 (ENSAPEG00000010522)	CUL5 (ENSAPEG00000010633)	setb (ENSAPEG00000010707)	CAPN5 (ENSAPEG00000010775)	ompb (ENSAPEG00000010827)	MYO7A (ENSAPEG00000010851)	ENSAPEG00000011042	AQP11 (ENSAPEG00000011055)	ENSAPEG00000011071	ENSAPEG00000011098	FCHSD2 (ENSAPEG00000011205)	foxred1 (ENSAPEG00000011215)	kcnj1b (ENSAPEG00000011228)	ENSAPEG00000011285	rabep1 (ENSAPEG00000011338) ##22	mpzl1l (ENSAPEG00000011425)	ENSAPEG00000011454	emsy (ENSAPEG00000011470)	ENSAPEG00000011590	ENSAPEG00000011613	tlcd5b (ENSAPEG00000011625)	elmod1 (ENSAPEG00000011637)	gria4b (ENSAPEG00000011689)	ywhae2 (ENSAPEG00000011754)	CRK (ENSAPEG00000011806)	ENSAPEG00000011836	ENSAPEG00000011869	ENSAPEG00000011897	TECTA (ENSAPEG00000011945)	TBCEL (ENSAPEG00000012084)
Clown anemonefish	MODERN SPECIES	3551								ENSAOCG00000006384	AQP11 (ENSAOCG00000006358)	ENSAOCG00000006338	ENSAOCG00000006313	FCHSD2 (ENSAOCG00000006252)	foxred1 (ENSAOCG00000006235)	kcnj1b (ENSAOCG00000006214)	ENSAOCG00000006184	rabep1 (ENSAOCG00000006147) ##22	mpzl1l (ENSAOCG00000006040)	ENSAOCG00000006032	emsy (ENSAOCG00000006020)
Spiny chromis	MODERN SPECIES	1890																rabep1 (ENSAPOG00000012633) ##22	mpzl1l (ENSAPOG00000012547)	ENSAPOG00000012532
Bicolor damselfish	MODERN SPECIES	509						ompb (ENSSPAG00000005744)	CAPN5 (ENSSPAG00000005714)	MYO7A (ENSSPAG00000005595)	GDPD4 (ENSSPAG00000005565)	AQP11 (ENSSPAG00000005549)	ENSSPAG00000005531	FCHSD2 (ENSSPAG00000005482)	foxred1 (ENSSPAG00000005430)	kcnj1b (ENSSPAG00000005420)	ENSSPAG00000005408	rabep1 (ENSSPAG00000005310) ##22	mpzl1l (ENSSPAG00000005279)	ENSSPAG00000005269	emsy (ENSSPAG00000005235)
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Aplocheiloidei	ANCESTRAL SPECIES	59	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Mangrove rivulus	MODERN SPECIES	120									ENSKMAG00000012202	ENSKMAG00000012216	ENSKMAG00000012258	FCHSD2 (ENSKMAG00000012329)	foxred1 (ENSKMAG00000012368)	kcnj1b (ENSKMAG00000012425)	ENSKMAG00000012436	rabep1 (ENSKMAG00000012471) ##22	mpzl1l (ENSKMAG00000012544)	ENSKMAG00000012560	emsy (ENSKMAG00000012608)	ENSKMAG00000012690	tlcd5b (ENSKMAG00000012722)	rcc1l (ENSKMAG00000012743)	castor2 (ENSKMAG00000012826)	DOC2B (ENSKMAG00000012901)	tmem248 (ENSKMAG00000012967)	lig3 (ENSKMAG00000013023)	rad51d (ENSKMAG00000013105)	tmem132e (ENSKMAG00000013144)	dtx2 (ENSKMAG00000013203)	GTF2IRD1 (ENSKMAG00000013231)	CLIP2 (ENSKMAG00000013315)
Turquoise killifish	MODERN SPECIES	1620	nup98 (ENSNFUG00015005465)	ENSNFUG00015005462	ENSNFUG00015005460	NHP2 (ENSNFUG00015005456)	ENSNFUG00015005450	ENSNFUG00015005443	ENSNFUG00015005429	ENSNFUG00015005424	ENSNFUG00015005420	ENSNFUG00015005411	ENSNFUG00015005384	FCHSD2 (ENSNFUG00015005345)	FOXRED1 (ENSNFUG00015005086)	kcnj1b (ENSNFUG00015005034)	ENSNFUG00015005030	RABEP1 (ENSNFUG00015004848) ##22	ENSNFUG00015022801	MPZL1L (ENSNFUG00015022796)	LRRC32 (ENSNFUG00015022791)	ENSNFUG00015022790	C10H11ORF30 (ENSNFUG00015022778)	ARHGEF12B (ENSNFUG00015022760)	TMEM136 (ENSNFUG00015022755)	rcc1l (ENSNFUG00015022719)	GATSL2 (ENSNFUG00015022707)	ENSNFUG00015022703	DOC2B (ENSNFUG00015022698)	TMEM248 (ENSNFUG00015022695)	LIG3 (ENSNFUG00015022579)	rad51d (ENSNFUG00015022543)	ENSNFUG00015022540
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Poeciliinae	ANCESTRAL SPECIES	26	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414
Poecilia	ANCESTRAL SPECIES	42	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414
NAME_6	ANCESTRAL SPECIES	44	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414
Amazon molly	MODERN SPECIES	402																rabep1 (ENSPFOG00000003835) ##22	mpzl1l (ENSPFOG00000003741)	ENSPFOG00000003717	emsy (ENSPFOG00000003557)	ENSPFOG00000003224	tlcd5b (ENSPFOG00000003202)	rcc1l (ENSPFOG00000003043)	castor2 (ENSPFOG00000002821)	ENSPFOG00000023519	DOC2B (ENSPFOG00000002635)	tmem248 (ENSPFOG00000002569)	lig3 (ENSPFOG00000002118)	rad51d (ENSPFOG00000001907)	tmem132e (ENSPFOG00000001690)	dtx2 (ENSPFOG00000001494)	GTF2IRD1 (ENSPFOG00000001233)
Sailfin molly	MODERN SPECIES	1028													foxred1 (ENSPLAG00000012019)	kcnj1b (ENSPLAG00000012043)	ENSPLAG00000012053	rabep1 (ENSPLAG00000012130) ##22	mpzl1l (ENSPLAG00000012185)	ENSPLAG00000012198	emsy (ENSPLAG00000012278)	ENSPLAG00000012542	tlcd5b (ENSPLAG00000012571)	ENSPLAG00000012583	rcc1l (ENSPLAG00000012625)
Guppy	MODERN SPECIES	444	CBL (ENSPREG00000015193)	ENSPREG00000015099	tmem120aa (ENSPREG00000015067)	styxl1 (ENSPREG00000015018)	HEPACAM (ENSPREG00000014972)	ompb (ENSPREG00000014958)	CAPN5 (ENSPREG00000014934)	MYO7A (ENSPREG00000014771)	GDPD4 (ENSPREG00000014734)	ENSPREG00000014730	ENSPREG00000014700	FCHSD2 (ENSPREG00000014659)	foxred1 (ENSPREG00000014645)	kcnj1b (ENSPREG00000014638)	ENSPREG00000014624	rabep1 (ENSPREG00000014547) ##22	mpzl1l (ENSPREG00000014512)	ENSPREG00000014506	emsy (ENSPREG00000014428)	ENSPREG00000014395	tlcd5b (ENSPREG00000014386)	ENSPREG00000014384	rcc1l (ENSPREG00000014358)	castor2 (ENSPREG00000014328)	DOC2B (ENSPREG00000014289)	tmem248 (ENSPREG00000014167)	lig3 (ENSPREG00000014115)	rad51d (ENSPREG00000014098)	tmem132e (ENSPREG00000014015)	dtx2 (ENSPREG00000013944)	GTF2IRD1 (ENSPREG00000013881)
Platyfish	MODERN SPECIES	2	ENSXMAG00000025188	tmem120aa (ENSXMAG00000011139)	styxl1 (ENSXMAG00000011154)	HEPACAM (ENSXMAG00000027038)	ompb (ENSXMAG00000019651)	CAPN5 (ENSXMAG00000011169)	MYO7A (ENSXMAG00000011193)	GDPD4 (ENSXMAG00000011255)	AQP11 (ENSXMAG00000000651)	ENSXMAG00000027612	ENSXMAG00000028499	FCHSD2 (ENSXMAG00000011270)	foxred1 (ENSXMAG00000011302)	kcnj1b (ENSXMAG00000011316)	ENSXMAG00000011318	rabep1 (ENSXMAG00000011320) ##22	mpzl1l (ENSXMAG00000011358)	ENSXMAG00000028354	emsy (ENSXMAG00000011362)	ENSXMAG00000011381	ENSXMAG00000021745	tlcd5b (ENSXMAG00000023906)	ENSXMAG00000025697	rcc1l (ENSXMAG00000011400)	castor2 (ENSXMAG00000028971)	DOC2B (ENSXMAG00000026280)	tmem248 (ENSXMAG00000025382)	lig3 (ENSXMAG00000011457)	rad51d (ENSXMAG00000011477)	ENSXMAG00000027783	tmem132e (ENSXMAG00000028869)
NAME_4	ANCESTRAL SPECIES	117	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Mummichog	MODERN SPECIES	279												FCHSD2 (ENSFHEG00000022423)	foxred1 (ENSFHEG00000022552)	kcnj1b (ENSFHEG00000022584)	ENSFHEG00000022606	rabep1 (ENSFHEG00000022679) ##22	mpzl1l (ENSFHEG00000022691)	ENSFHEG00000022703	emsy (ENSFHEG00000022711)	ENSFHEG00000022749	tlcd5b (ENSFHEG00000022764)	rcc1l (ENSFHEG00000022794)	castor2 (ENSFHEG00000022870)	DOC2B (ENSFHEG00000022913)
Sheepshead minnow	MODERN SPECIES	517								MYO7A (ENSCVAG00000011913)	ENSCVAG00000012002	ENSCVAG00000012044	ENSCVAG00000012733	FCHSD2 (ENSCVAG00000012852)	foxred1 (ENSCVAG00000012954)	kcnj1b (ENSCVAG00000012991)	ENSCVAG00000013026	rabep1 (ENSCVAG00000013087) ##22	mpzl1l (ENSCVAG00000013110)	ENSCVAG00000013118	emsy (ENSCVAG00000013350)	tlcd5b (ENSCVAG00000013414)
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Oryzias_b	ANCESTRAL SPECIES	53	ENSGT00940000160785	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a
Indian medaka	MODERN SPECIES	4	CRK (ENSOMEG00000002246)	ywhae2 (ENSOMEG00000002238)	gria4b (ENSOMEG00000002214)	MYO7A (ENSOMEG00000002179)	CAPN5 (ENSOMEG00000002138)	ompb (ENSOMEG00000002119)	CUL5 (ENSOMEG00000002107)	slc35f2 (ENSOMEG00000000029)	elmod1 (ENSOMEG00000000025)	AQP11 (ENSOMEG00000002076)	ENSOMEG00000002068	FCHSD2 (ENSOMEG00000002057)	foxred1 (ENSOMEG00000002042)	kcnj1b (ENSOMEG00000002032)	ENSOMEG00000002025	rabep1 (ENSOMEG00000002008) ##22	mpzl1l (ENSOMEG00000001988)	ENSOMEG00000001980	emsy (ENSOMEG00000001967)	ENSOMEG00000001943	ENSOMEG00000001873	ENSOMEG00000000012	st6gal1 (ENSOMEG00000001712)	ncf1 (ENSOMEG00000001705)	gria1b (ENSOMEG00000001682)	nipal4 (ENSOMEG00000001642)	ins (ENSOMEG00000001632)	acat1 (ENSOMEG00000001631)	ENSOMEG00000001625	MMP1 (ENSOMEG00000001620)	acer3 (ENSOMEG00000001601)
Javanese ricefish	MODERN SPECIES	5	dtx2 (ENSOJAG00000018414)	tmem132e (ENSOJAG00000018444)	rad51d (ENSOJAG00000018456)	lig3 (ENSOJAG00000018520)	tmem248 (ENSOJAG00000019496)	ENSOJAG00000019539	ENSOJAG00000019559	ENSOJAG00000019594	ENSOJAG00000019602	ENSOJAG00000019613	AQP11 (ENSOJAG00000019634)	FCHSD2 (ENSOJAG00000019670)	foxred1 (ENSOJAG00000019696)	kcnj1b (ENSOJAG00000019720)	ENSOJAG00000019733	rabep1 (ENSOJAG00000019803) ##22	mpzl1l (ENSOJAG00000020322)	ENSOJAG00000020336	emsy (ENSOJAG00000020358)	ENSOJAG00000020578	tlcd5b (ENSOJAG00000020586)	rcc1l (ENSOJAG00000020598)	DOC2B (ENSOJAG00000020663)	CAPN5 (ENSOJAG00000020775)	ompb (ENSOJAG00000020893)	slc35f2 (ENSOJAG00000001681)	elmod1 (ENSOJAG00000001746)	gria4b (ENSOJAG00000001902)	ywhae2 (ENSOJAG00000002299)	CRK (ENSOJAG00000002345)	ENSOJAG00000002357
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114.e	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b ##22	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414	ENSGT00940000159426
Japanese Medaka HdrR	MODERN SPECIES	5	gria4b (ENSORLG00000014865)	ENSORLG00000029515	elmod1 (ENSORLG00000014887)	slc35f2 (ENSORLG00000014902)	ENSORLG00000014938	ENSORLG00000014975	ompb (ENSORLG00000014978)	ENSORLG00000015036	ENSORLG00000021923	ENSORLG00000015053	ENSORLG00000028843	ENSORLG00000028737	foxred1 (ENSORLG00000015079)	kcnj1b (ENSORLG00000015086)	ENSORLG00000029829	rabep1 (ENSORLG00000015131) ##22	mpzl1l (ENSORLG00000023228)	ENSORLG00000023939	emsy (ENSORLG00000023771)	ENSORLG00000022756	ENSORLG00000025239	rcc1l (ENSORLG00000015158)	castor2 (ENSORLG00000015182)	DOC2B (ENSORLG00000015189)	tmem248 (ENSORLG00000015203)	lig3 (ENSORLG00000015208)	rad51d (ENSORLG00000015239)	tmem132e (ENSORLG00000015249)	dtx2 (ENSORLG00000015263)	GTF2IRD1 (ENSORLG00000015316)	CLIP2 (ENSORLG00000015350)
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	4369																ENSOSIG00000001802 ##22
Chinese medaka	MODERN SPECIES	649										ENSOSIG00000000911	kcnj1b (ENSOSIG00000000909)	FCHSD2 (ENSOSIG00000000830)	ENSOSIG00000000815	ENSOSIG00000000810	ENSOSIG00000000801	rabep1 (ENSOSIG00000000794) ##22
Tiger tail seahorse	MODERN SPECIES	37	ap4m1 (ENSHCOG00000011843)	arrb2a (ENSHCOG00000011837)	taf9 (ENSHCOG00000011829)	trim3b (ENSHCOG00000011806)	trim47 (ENSHCOG00000011771)	ENSHCOG00000011762	alg5 (ENSHCOG00000011746)	exosc8 (ENSHCOG00000011740)	SUPT20H (ENSHCOG00000011716)	ugt5d1 (ENSHCOG00000011695)	POSTN (ENSHCOG00000011666)	trpc4a (ENSHCOG00000011293)	foxred1 (ENSHCOG00000011259)	kcnj1b (ENSHCOG00000011237)	ENSHCOG00000011225	rabep1 (ENSHCOG00000011219) ##22	mpzl1l (ENSHCOG00000011187)	mpzl1l (ENSHCOG00000011180)	ENSHCOG00000011171	ENSHCOG00000011150	emsy (ENSHCOG00000011123)	sar1b (ENSHCOG00000010953)	ENSHCOG00000010935	SEC24A (ENSHCOG00000000340)	camlg (ENSHCOG00000010880)	ddx46 (ENSHCOG00000010877)	zgc:77058 (ENSHCOG00000010859)	txndc15 (ENSHCOG00000010851)	PCBD2 (ENSHCOG00000010843)	ENSHCOG00000010840	pitx1 (ENSHCOG00000010831)
Pinecone sodierfish	MODERN SPECIES	5	USP28 (ENSMMDG00005010690)	orai2 (ENSMMDG00005010635)	bckdk (ENSMMDG00005010570)	lrwd1 (ENSMMDG00005010558)	ENSMMDG00005010553	ENSMMDG00005010546	alkbh4 (ENSMMDG00005010541)	CBL (ENSMMDG00005010540)	ENSMMDG00005010536	ENSMMDG00005010534	FCHSD2 (ENSMMDG00005010529)	ENSMMDG00005010526	foxred1 (ENSMMDG00005010328)	kcnj1b (ENSMMDG00005010321)	ENSMMDG00005010320	rabep1 (ENSMMDG00005008501) ##22	mpzl1l (ENSMMDG00005008442)	ENSMMDG00005008440	emsy (ENSMMDG00005008415)	ENSMMDG00005008401	ENSMMDG00005008393	ENSMMDG00005008388	tlcd5b (ENSMMDG00005008386)	rcc1l (ENSMMDG00005008269)	castor2 (ENSMMDG00005008253)	DOC2B (ENSMMDG00005008230)	ENSMMDG00005008223	tmem248 (ENSMMDG00005008217)	lig3 (ENSMMDG00005004307)	rad51d (ENSMMDG00005003981)	tmem132e (ENSMMDG00005003826)
Cod	MODERN SPECIES	20	CAPN5 (ENSGMOG00000011259)	ENSGMOG00000011242	slc35f2 (ENSGMOG00000011228)	elmod1 (ENSGMOG00000023607)	gria4b (ENSGMOG00000000875)	ENSGMOG00000024669	ENSGMOG00000032933	ENSGMOG00000022235	ENSGMOG00000011162	ENSGMOG00000011147	ENSGMOG00000011123	ENSGMOG00000011115	ENSGMOG00000011057	ENSGMOG00000011048	ENSGMOG00000013164	ENSGMOG00000013151 ##22	USP28 (ENSGMOG00000012774)	ENSGMOG00000012786	HTR3A (ENSGMOG00000012790)	HTR3A (ENSGMOG00000024159)	zbtb16a (ENSGMOG00000012795)	ncam1a (ENSGMOG00000019522)	ENSGMOG00000031628	ENSGMOG00000006069	ENSGMOG00000006075	ENSGMOG00000024602	ENSGMOG00000006084	ENSGMOG00000028510	ENSGMOG00000023961	ENSGMOG00000022261	ENSGMOG00000006998
Protacanthopterygii	ANCESTRAL SPECIES	51	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a.g	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662	ENSGT00990000203615.b.a.a.a.b	ENSGT01080000257365.b.a.b.a.a	ENSGT00940000157408.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C	ENSGT00390000013771	ENSGT00730000111429	ENSGT00390000002960.c.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	161	ENSGT00390000016686.h.a	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764.e	ENSGT00940000155206.k.b	ENSGT00940000155206.l	ENSGT00390000016209	ENSGT00390000015354.c.b.b.n	ENSGT01030000234646.A.e	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.d	ENSGT00940000155772.a.b.b	ENSGT00940000155838.f.e	ENSGT00530000063156.a.a.a.f	ENSGT00530000063743.b.g ##22	ENSGT00390000015063.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000005003.a	ENSGT00500000044950.f
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00390000016686.h.a	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764.e	ENSGT00940000155206.k.b	ENSGT00390000016209	ENSGT00390000015354.c.b.b.n	ENSGT01030000234646.A.e	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.d	ENSGT00940000155772.a.b.b	ENSGT00940000155838.f.e	ENSGT00990000211464	ENSGT00530000063156.a.a.a.f	ENSGT00530000063743.b.g ##22	ENSGT00390000015063.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000005003.a	ENSGT00500000044950.f	ENSGT00940000160202.a	ENSGT00940000160662.i	ENSGT00990000203615.b.a.a.a.b.c	ENSGT01080000257365.b.a.b.a.a.d.b.a	ENSGT00940000157408.a.a.b	ENSGT00940000154465.C.d	ENSGT00390000013771	ENSGT00730000111429.f	ENSGT00390000002960.c.b	ENSGT00940000159985.h.a	ENSGT00940000160816.a.a
Salmo	ANCESTRAL SPECIES	17	ENSGT00390000009588.rb	ENSGT00390000016686.h.a	ENSGT00940000154849.a	ENSGT00940000160764.e	ENSGT00940000155206.k.b	ENSGT00390000016209	ENSGT00390000015354.c.b.b.n	ENSGT01030000234646.A.e	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.d	ENSGT00940000155772.a.b.b	ENSGT00940000155838.f.e	ENSGT00990000211464	ENSGT00530000063156.a.a.a.f	ENSGT00530000063743.b.g ##22	ENSGT00390000015063.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000005003.a	ENSGT00500000044950.f	ENSGT00940000160202.a	ENSGT00940000160662.i	ENSGT00990000203615.b.a.a.a.b.c	ENSGT01080000257365.b.a.b.a.a.d.b.a	ENSGT00940000157408.a.a.b	ENSGT00940000154465.C.d	ENSGT00390000013771	ENSGT00730000111429.f	ENSGT00390000002960.c.b	ENSGT00940000159985.h.a	ENSGT00940000160816.a.a
River trout	MODERN SPECIES	10	ENSSTUG00000003624	mdh2 (ENSSTUG00000003477)	RASL10B (ENSSTUG00000003463)	ap2b1 (ENSSTUG00000003206)	pex12 (ENSSTUG00000003181)	orai2 (ENSSTUG00000003156)	bckdk (ENSSTUG00000002883)	lrwd1 (ENSSTUG00000002753)	alkbh4 (ENSSTUG00000002733)	polr2j (ENSSTUG00000002725)	ENSSTUG00000002719	CBL (ENSSTUG00000002677)	ENSSTUG00000002545	ENSSTUG00000019603	derl2 (ENSSTUG00000019576)	rabep1 (ENSSTUG00000018241) ##22	nup88 (ENSSTUG00000017702)	ENSSTUG00000017674	prkrip1 (ENSSTUG00000017664)	psmg1 (ENSSTUG00000017636)	ETS2 (ENSSTUG00000017608)	erg (ENSSTUG00000017547)	KCNJ15 (ENSSTUG00000017533)	KCNJ6 (ENSSTUG00000017528)	dyrk1aa (ENSSTUG00000017345)	ENSSTUG00000017261	pigp (ENSSTUG00000017244)	ripply3 (ENSSTUG00000017228)	ENSSTUG00000017225	ENSSTUG00000017222	SIM2 (ENSSTUG00000017151)
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000063821	ENSSSAG00000063839	ENSSSAG00000063924	RASL10B (ENSSSAG00000112383)	ap2b1 (ENSSSAG00000063935)	pex12 (ENSSSAG00000064295)	bckdk (ENSSSAG00000064311)	orai2 (ENSSSAG00000064297)	lrwd1 (ENSSSAG00000064546)	alkbh4 (ENSSSAG00000064584)	polr2j (ENSSSAG00000064585)	ENSSSAG00000007934	ENSSSAG00000064621	ENSSSAG00000009879	derl2 (ENSSSAG00000007893)	rabep1 (ENSSSAG00000064694) ##22	nup88 (ENSSSAG00000065275)	vps37d (ENSSSAG00000066075)	ENSSSAG00000094599	psmg1 (ENSSSAG00000066079)	ets2 (ENSSSAG00000066085)	erg (ENSSSAG00000066099)	KCNJ15 (ENSSSAG00000119335)	KCNJ6 (ENSSSAG00000066125)	dyrk1aa (ENSSSAG00000066148)	TTC3 (ENSSSAG00000066200)	pigp (ENSSSAG00000066233)	ripply3 (ENSSSAG00000084247)	HLCS (ENSSSAG00000066242)	SIM2 (ENSSSAG00000005292)	ENSSSAG00000104737
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00390000016686.h.a	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764.e	ENSGT00940000155206.k.b	ENSGT00390000016209	ENSGT00390000015354.c.b.b.n	ENSGT01030000234646.A.e	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.d	ENSGT00940000155772.a.b.b	ENSGT00940000155838.f.e	ENSGT00990000211464	ENSGT00530000063156.a.a.a.f	ENSGT00530000063743.b.g ##22	ENSGT00390000015063.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000005003.a	ENSGT00500000044950.f	ENSGT00940000160202.a	ENSGT00940000160662.i	ENSGT00990000203615.b.a.a.a.b.c	ENSGT01080000257365.b.a.b.a.a.d.b.a	ENSGT00940000157408.a.a.b	ENSGT00390000013771	ENSGT00730000111429.f	ENSGT00390000002960.c.b	ENSGT00940000159985.h.a	ENSGT00940000160816.a.a	ENSGT00390000002172.A.a.e.a
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000017390	ENSOMYG00000051062	ENSOMYG00000017157	ENSOMYG00000017129	RASL10B (ENSOMYG00000049745)	ap2b1 (ENSOMYG00000016846)	pex12 (ENSOMYG00000016809)	orai2 (ENSOMYG00000016752)	bckdk (ENSOMYG00000016689)	lrwd1 (ENSOMYG00000016633)	alkbh4 (ENSOMYG00000016622)	ENSOMYG00000016597	ENSOMYG00000016513	ENSOMYG00000016499	derl2 (ENSOMYG00000016490)	rabep1 (ENSOMYG00000014394) ##22	nup88 (ENSOMYG00000056910)	ENSOMYG00000014279	psmg1 (ENSOMYG00000014245)	ENSOMYG00000048904	ETS2 (ENSOMYG00000014204)	erg (ENSOMYG00000014143)	KCNJ15 (ENSOMYG00000014092)	KCNJ6 (ENSOMYG00000014074)	ENSOMYG00000014067	DYRK1A (ENSOMYG00000013578)	pigp (ENSOMYG00000013487)	ENSOMYG00000013470	SIM2 (ENSOMYG00000013464)	ENSOMYG00000013444	ENSOMYG00000013410
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00390000009588.rb	ENSGT00390000016686.h.a	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764.e	ENSGT00940000155206.k.b	ENSGT00390000016209	ENSGT00390000015354.c.b.b.n	ENSGT01030000234646.A.e	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.d	ENSGT00940000155772.a.b.b	ENSGT00940000155838.f.e	ENSGT00530000063156.a.a.a.f	ENSGT00530000063743.b.g ##22	ENSGT00390000015063.a	ENSGT00950000183012.B.a.g.a	ENSGT00390000005003.a	ENSGT00500000044950.f	ENSGT00940000160202.a	ENSGT00940000160662.i	ENSGT00990000203615.b.a.a.a.b.c	ENSGT01080000257365.b.a.b.a.a.d.b.a	ENSGT00940000157408.a.a.b	ENSGT00390000013771	ENSGT00730000111429.f	ENSGT00390000002960.c.b	ENSGT00940000159985.h.a	ENSGT00940000160816.a.a	ENSGT00390000002172.A.a.e.a
Chinook salmon	MODERN SPECIES	23	ska2 (ENSOTSG00005038951)	ENSOTSG00005038944	mdh2 (ENSOTSG00005038470)	ENSOTSG00005038468	RASL10B (ENSOTSG00005038467)	ap2b1 (ENSOTSG00005038017)	pex12 (ENSOTSG00005038016)	orai2 (ENSOTSG00005038015)	bckdk (ENSOTSG00005038000)	lrwd1 (ENSOTSG00005037985)	alkbh4 (ENSOTSG00005037981)	polr2j (ENSOTSG00005037980)	CBL (ENSOTSG00005037978)	ENSOTSG00005037974	derl2 (ENSOTSG00005037969)	rabep1 (ENSOTSG00005033007) ##22	nup88 (ENSOTSG00005032997)	ENSOTSG00005032996	prkrip1 (ENSOTSG00005032995)	psmg1 (ENSOTSG00005032994)	ETS2 (ENSOTSG00005032991)	erg (ENSOTSG00005032986)	KCNJ15 (ENSOTSG00005032985)	KCNJ6 (ENSOTSG00005032984)	DYRK1A (ENSOTSG00005032419)	pigp (ENSOTSG00005032414)	RIPPLY3 (ENSOTSG00005032412)	ENSOTSG00005032411	SIM2 (ENSOTSG00005032406)	ENSOTSG00005032405	ENSOTSG00005032404
Coho salmon	MODERN SPECIES	20	rad51c (ENSOKIG00005046357)	ska2 (ENSOKIG00005046376)	mdh2 (ENSOKIG00005046400)	ENSOKIG00005046491	RASL10B (ENSOKIG00005046494)	ap2b1 (ENSOKIG00005046506)	pex12 (ENSOKIG00005046564)	orai2 (ENSOKIG00005046569)	bckdk (ENSOKIG00005046583)	lrwd1 (ENSOKIG00005046697)	alkbh4 (ENSOKIG00005046728)	CBL (ENSOKIG00005046732)	ENSOKIG00005046744	mis12 (ENSOKIG00005046787)	derl2 (ENSOKIG00005046807)	rabep1 (ENSOKIG00005046844) ##22	ENSOKIG00005047346	ENSOKIG00005047363	psmg1 (ENSOKIG00005047368)	ETS2 (ENSOKIG00005047385)	KCNJ15 (ENSOKIG00005047399)	erg (ENSOKIG00005047415)	KCNJ6 (ENSOKIG00005047467)	DYRK1A (ENSOKIG00005047500)	pigp (ENSOKIG00005047655)	RIPPLY3 (ENSOKIG00005047661)	ENSOKIG00005047666	SIM2 (ENSOKIG00005047681)	ENSOKIG00005047712	bcl7ba (ENSOKIG00005047722)	tbl2 (ENSOKIG00005047729)
Huchen	MODERN SPECIES	935						ENSHHUG00000001263	pex12 (ENSHHUG00000001273)	orai2 (ENSHHUG00000001291)	bckdk (ENSHHUG00000001393)	lrwd1 (ENSHHUG00000001461)	alkbh4 (ENSHHUG00000001523)	polr2j (ENSHHUG00000001538)	CBL (ENSHHUG00000001618)	ENSHHUG00000001635	derl2 (ENSHHUG00000001790)	rabep1 (ENSHHUG00000001843) ##22	nup88 (ENSHHUG00000002223)	ENSHHUG00000002484	prkrip1 (ENSHHUG00000002492)	psmg1 (ENSHHUG00000002503)	ENSHHUG00000002529	ENSHHUG00000002536
Salmoninae	ANCESTRAL SPECIES	121	ENSGT00940000156805.v	ENSGT01030000235478	ENSGT00390000009588.sb	ENSGT00390000016686.h.b	ENSGT00940000160764.f	ENSGT00940000155206.k.a	ENSGT01100000264661	ENSGT00390000015354.c.b.b.m	ENSGT01030000234646.A.f	ENSGT00550000074975.c	ENSGT00940000155772.a.b.a	ENSGT00940000155838.f.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a.e	ENSGT00530000063743.b.h ##22	ENSGT00390000015063.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000005003.b	ENSGT00940000153392.b.b	ENSGT00500000044950.e	ENSGT00940000162556.E.b.a	ENSGT00940000160202.b	ENSGT00940000160662.j	ENSGT00990000203615.b.a.a.a.b.d	ENSGT01080000257365.b.a.b.a.a.d.b.b	ENSGT00940000157408.a.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C.c	ENSGT00390000002960.c.a	ENSGT00940000159985.h.b
Salmoninae_a	ANCESTRAL SPECIES	55	ENSGT00940000157884.c	ENSGT00940000156805.v	ENSGT00390000009588.sb	ENSGT00390000016686.h.b	ENSGT00940000160764.f	ENSGT00940000155206.k.a	ENSGT01100000264661	ENSGT00390000015354.c.b.b.m	ENSGT01030000234646.A.f	ENSGT00550000074975.c	ENSGT00940000155772.a.b.a	ENSGT00940000155838.f.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a.e	ENSGT00530000063743.b.h ##22	ENSGT00390000015063.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000005003.b	ENSGT00940000153392.b.b	ENSGT00500000044950.e	ENSGT00940000162556.E.b.a	ENSGT00940000160202.b	ENSGT00990000214320	ENSGT00940000160662.j	ENSGT00990000203615.b.a.a.a.b.d	ENSGT01080000257365.b.a.b.a.a.d.b.b	ENSGT00940000157408.a.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C.c	ENSGT00730000111429.e
Salmo	ANCESTRAL SPECIES	44	ENSGT00410000025800.d	ENSGT00940000157884.c	ENSGT00940000156805.v	ENSGT00390000009588.sb	ENSGT00390000016686.h.b	ENSGT00940000160764.f	ENSGT00940000155206.k.a	ENSGT00390000015354.c.b.b.m	ENSGT01030000234646.A.f	ENSGT00550000074975.c	ENSGT00940000155772.a.b.a	ENSGT00940000155838.f.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a.e	ENSGT00530000063743.b.h ##22	ENSGT00390000015063.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000005003.b	ENSGT00940000153392.b.b	ENSGT00500000044950.e	ENSGT00940000162556.E.b.a	ENSGT00940000160202.b	ENSGT00990000214320	ENSGT00940000160662.j	ENSGT00990000203615.b.a.a.a.b.d	ENSGT01080000257365.b.a.b.a.a.d.b.b	ENSGT00940000157408.a.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C.c	ENSGT00990000211738
River trout	MODERN SPECIES	6	TRIM37 (ENSSTUG00000004161)	ppm1e (ENSSTUG00000004091)	rad51c (ENSSTUG00000004060)	ska2 (ENSSTUG00000003986)	mdh2 (ENSSTUG00000003457)	RASL10B (ENSSTUG00000003422)	ap2b1 (ENSSTUG00000003143)	orai2 (ENSSTUG00000003106)	bckdk (ENSSTUG00000002913)	polr2j (ENSSTUG00000002891)	CBL (ENSSTUG00000002617)	ENSSTUG00000031526	ENSSTUG00000031511	mis12 (ENSSTUG00000031493)	derl2 (ENSSTUG00000031462)	rabep1 (ENSSTUG00000029838) ##22	nup88 (ENSSTUG00000029633)	ENSSTUG00000029616	prkrip1 (ENSSTUG00000029609)	upk3b (ENSSTUG00000029589)	psmg1 (ENSSTUG00000029573)	ENSSTUG00000029562	ENSSTUG00000029551	ETS2 (ENSSTUG00000029506)	erg (ENSSTUG00000029169)	KCNJ15 (ENSSTUG00000029152)	KCNJ6 (ENSSTUG00000029139)	ENSSTUG00000029137	dyrk1aa (ENSSTUG00000029066)	vps26c (ENSSTUG00000028910)	TTC3 (ENSSTUG00000028776)
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000115752	ENSSSAG00000120305	ska2 (ENSSSAG00000008209)	ENSSSAG00000008143	ENSSSAG00000008131	ap2b1 (ENSSSAG00000008072)	ENSSSAG00000119725	orai2 (ENSSSAG00000008033)	bckdk (ENSSSAG00000007966)	RPB11 (ENSSSAG00000007950)	CBL (ENSSSAG00000096673)	ENSSSAG00000007911	RNF26 (ENSSSAG00000098393)	mis12 (ENSSSAG00000113565)	ENSSSAG00000101415	rabep1 (ENSSSAG00000007026) ##22	nup88 (ENSSSAG00000006973)	ENSSSAG00000097025	prkrip1 (ENSSSAG00000101653)	ENSSSAG00000118721	ENSSSAG00000006943	ETS2 (ENSSSAG00000006718)	ENSSSAG00000006940	erg (ENSSSAG00000006737)	KCNJ15 (ENSSSAG00000086710)	KCNJ6 (ENSSSAG00000006713)	dyrk1aa (ENSSSAG00000006561)	vps26c (ENSSSAG00000069718)	TTC3 (ENSSSAG00000069669)	ENSSSAG00000069655	ripply3 (ENSSSAG00000069651)
Oncorhynchus	ANCESTRAL SPECIES	21	ENSGT00940000157884.c	ENSGT00940000156805.v	ENSGT00390000009588.sb	ENSGT00390000016686.h.b	ENSGT00940000160764.f	ENSGT00940000155206.k.a	ENSGT01100000264661	ENSGT00390000015354.c.b.b.m	ENSGT01030000234646.A.f	ENSGT00550000074975.c	ENSGT00940000155772.a.b.a	ENSGT00940000155838.f.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a.e	ENSGT00530000063743.b.h ##22	ENSGT00390000015063.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000005003.b	ENSGT00940000162556.E.b.a	ENSGT00940000160202.b	ENSGT00990000214320	ENSGT00940000160662.j	ENSGT00990000203615.b.a.a.a.b.d	ENSGT01080000257365.b.a.b.a.a.d.b.b	ENSGT00940000157408.a.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C.c	ENSGT00730000111429.e	ENSGT00390000002960.c.a	ENSGT00940000159985.h.b
Oncorhynchus_a	ANCESTRAL SPECIES	19	ENSGT00940000157884.c	ENSGT00940000156805.v	ENSGT00390000009588.sb	ENSGT00390000016686.h.b	ENSGT00940000160764.f	ENSGT00940000155206.k.a	ENSGT01100000264661	ENSGT00390000015354.c.b.b.m	ENSGT01030000234646.A.f	ENSGT00550000074975.c	ENSGT00940000155772.a.b.a	ENSGT00940000155838.f.f	ENSGT00390000016584.c	ENSGT00390000018665	ENSGT00530000063156.a.a.a.e	ENSGT00530000063743.b.h ##22	ENSGT00390000015063.b	ENSGT00950000183012.B.a.g.b	ENSGT00390000005003.b	ENSGT00940000162556.E.b.a	ENSGT00940000160202.b	ENSGT00940000160662.j	ENSGT00990000203615.b.a.a.a.b.d	ENSGT01080000257365.b.a.b.a.a.d.b.b	ENSGT00940000157408.a.a.a	ENSGT00950000183064.b	ENSGT00940000154465.C.c	ENSGT00990000211738	ENSGT00390000002960.c.a	ENSGT00940000159985.h.b	ENSGT00940000160816.a.b
Coho salmon	MODERN SPECIES	26	ppm1e (ENSOKIG00005040061)	rad51c (ENSOKIG00005040070)	ENSOKIG00005040152	MDH2 (ENSOKIG00005040246)	RASL10B (ENSOKIG00005040891)	ap2b1 (ENSOKIG00005040923)	ENSOKIG00005041135	orai2 (ENSOKIG00005041171)	bckdk (ENSOKIG00005041203)	polr2j (ENSOKIG00005041720)	CBL (ENSOKIG00005041759)	ENSOKIG00005041822	RNF26 (ENSOKIG00005041950)	mis12 (ENSOKIG00005041960)	derl2 (ENSOKIG00005041967)	rabep1 (ENSOKIG00005042024) ##22	nup88 (ENSOKIG00005042485)	ENSOKIG00005042580	prkrip1 (ENSOKIG00005042589)	ENSOKIG00005042596	ETS2 (ENSOKIG00005042612)	erg (ENSOKIG00005042693)	KCNJ15 (ENSOKIG00005042856)	KCNJ6 (ENSOKIG00005042876)	dyrk1aa (ENSOKIG00005042915)	vps26c (ENSOKIG00005043181)	TTC3 (ENSOKIG00005043287)	HLCS (ENSOKIG00005043384)	ENSOKIG00005043648	ENSOKIG00005043693	ENSOKIG00005043765
Chinook salmon	MODERN SPECIES	33	TRIM37 (ENSOTSG00005044794)	ppm1e (ENSOTSG00005045075)	rad51c (ENSOTSG00005045076)	ska2 (ENSOTSG00005045077)	mdh2 (ENSOTSG00005045079)	RASL10B (ENSOTSG00005045141)	ap2b1 (ENSOTSG00005045142)	orai2 (ENSOTSG00005000791)	bckdk (ENSOTSG00005000935)	polr2j (ENSOTSG00005001540)	CBL (ENSOTSG00005001585)	ENSOTSG00005001589	RNF26 (ENSOTSG00005001591)	mis12 (ENSOTSG00005001592)	derl2 (ENSOTSG00005001593)	rabep1 (ENSOTSG00005001604) ##22	nup88 (ENSOTSG00005003673)	ENSOTSG00005004205	prkrip1 (ENSOTSG00005004209)	ENSOTSG00005004211	ETS2 (ENSOTSG00005004214)	erg (ENSOTSG00005004219)	KCNJ15 (ENSOTSG00005004238)	KCNJ6 (ENSOTSG00005004240)	dyrk1aa (ENSOTSG00005004245)	vps26c (ENSOTSG00005004461)	TTC3 (ENSOTSG00005004463)	ENSOTSG00005004465	HLCS (ENSOTSG00005004467)	ENSOTSG00005004896	ENSOTSG00005004898
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000041223	ENSOMYG00000070979	ENSOMYG00000063753	ENSOMYG00000041264	ENSOMYG00000017119	ap2b1 (ENSOMYG00000041483)	orai2 (ENSOMYG00000063111)	bckdk (ENSOMYG00000041822)	polr2j (ENSOMYG00000041882)	CBL (ENSOMYG00000041886)	ENSOMYG00000041892	RNF26 (ENSOMYG00000041897)	mis12 (ENSOMYG00000041903)	ENSOMYG00000072278	derl2 (ENSOMYG00000041904)	rabep1 (ENSOMYG00000042021) ##22	nup88 (ENSOMYG00000043591)	ENSOMYG00000071326	ENSOMYG00000057641	ENSOMYG00000068435	prkrip1 (ENSOMYG00000043628)	ENSOMYG00000043637	ETS2 (ENSOMYG00000043650)	ENSOMYG00000063452	erg (ENSOMYG00000043702)	KCNJ15 (ENSOMYG00000043754)	KCNJ6 (ENSOMYG00000043759)	dyrk1aa (ENSOMYG00000043768)	vps26c (ENSOMYG00000031736)	ENSOMYG00000049970	TTC3 (ENSOMYG00000031842)
Huchen	MODERN SPECIES	60	rad51c (ENSHHUG00000032826)	ENSHHUG00000032823	ska2 (ENSHHUG00000032796)	mdh2 (ENSHHUG00000032587)	RASL10B (ENSHHUG00000032576)	ap2b1 (ENSHHUG00000032391)	ENSHHUG00000032375	orai2 (ENSHHUG00000032371)	bckdk (ENSHHUG00000032236)	polr2j (ENSHHUG00000032225)	CBL (ENSHHUG00000032213)	ENSHHUG00000032162	RNF26 (ENSHHUG00000032157)	mis12 (ENSHHUG00000032155)	derl2 (ENSHHUG00000031974)	rabep1 (ENSHHUG00000031884) ##22	nup88 (ENSHHUG00000031800)	ENSHHUG00000031791	prkrip1 (ENSHHUG00000031779)	upk3b (ENSHHUG00000031761)	psmg1 (ENSHHUG00000031748)	ENSHHUG00000031741	ETS2 (ENSHHUG00000031717)	erg (ENSHHUG00000031645)	KCNJ15 (ENSHHUG00000031639)	KCNJ6 (ENSHHUG00000031636)	dyrk1aa (ENSHHUG00000031598)	vps26c (ENSHHUG00000031585)	TTC3 (ENSHHUG00000031554)	ENSHHUG00000031536	HLCS (ENSHHUG00000031534)
Northern pike	MODERN SPECIES	6	ENSELUG00000012517	RASL10B (ENSELUG00000012540)	ap2b1 (ENSELUG00000012648)	pex12 (ENSELUG00000012691)	orai2 (ENSELUG00000029718)	bckdk (ENSELUG00000012750)	ENSELUG00000028263	lrwd1 (ENSELUG00000012779)	alkbh4 (ENSELUG00000012802)	polr2j (ENSELUG00000012822)	CBL (ENSELUG00000012919)	ENSELUG00000012996	RNF26 (ENSELUG00000013018)	mis12 (ENSELUG00000013031)	derl2 (ENSELUG00000013097)	rabep1 (ENSELUG00000013265) ##22	nup88 (ENSELUG00000013334)	ENSELUG00000013349	prkrip1 (ENSELUG00000013385)	psmg1 (ENSELUG00000000488)	ETS2 (ENSELUG00000013434)	erg (ENSELUG00000013480)	KCNJ15 (ENSELUG00000013494)	KCNJ6 (ENSELUG00000013515)	dyrk1aa (ENSELUG00000013555)	vps26c (ENSELUG00000013599)	TTC3 (ENSELUG00000013660)	tcn2 (ENSELUG00000001103)	pigp (ENSELUG00000026253)	ripply3 (ENSELUG00000013761)	HLCS (ENSELUG00000013780)
Osteoglossiformes	ANCESTRAL SPECIES	27	ENSGT00940000154890.a.a	ENSGT00940000174983	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228.h	ENSGT00390000005976.a.a.a.q ##20	ENSGT00390000005976.a.a.b ##20	ENSGT00940000153556.B	ENSGT00940000162978.a.a.b	ENSGT00940000166102	ENSGT00390000013187	ENSGT00390000018665	ENSGT00530000063156.a.a.a	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00950000183012.B.a	ENSGT00390000005003	ENSGT00940000153392.b.b	ENSGT00940000160149	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317
Asian bonytongue	MODERN SPECIES	17	p2rx1 (ENSSFOG00015001843)	camkk1a (ENSSFOG00015001875)	ATP2A3 (ENSSFOG00015001908)	ZZEF1 (ENSSFOG00015002015)	cyb5d2 (ENSSFOG00015030114)	ankfy1 (ENSSFOG00015002252)	UBE2G1 (ENSSFOG00015002389)	spns3 (ENSSFOG00015002415) ##20	SPNS2 (ENSSFOG00015002477) ##20	ruvbl2 (ENSSFOG00015002532)	ftr83 (ENSSFOG00015002595)	ftr82 (ENSSFOG00015002612)	ift22 (ENSSFOG00015002640)	mis12 (ENSSFOG00015002648)	derl2 (ENSSFOG00015002652)	rabep1 (ENSSFOG00015002695) ##22	nup88 (ENSSFOG00015002786)	ENSSFOG00015002836	prkrip1 (ENSSFOG00015002847)	upk3b (ENSSFOG00015027271)	rasa4 (ENSSFOG00015002894)	CLIP2 (ENSSFOG00015002997)	GTF2IRD1 (ENSSFOG00015003076)	dtx2 (ENSSFOG00015025780)	tmem132e (ENSSFOG00015003128)	lig3 (ENSSFOG00015003139)	rad51d (ENSSFOG00015003182)	tmem248 (ENSSFOG00015029199)	DOC2B (ENSSFOG00015003225)	castor2 (ENSSFOG00015003277)	rcc1l (ENSSFOG00015003321)
P. kingsleyae	MODERN SPECIES	28	ENSPKIG00000017538	ATP2A3 (ENSPKIG00000017593)	ENSPKIG00000017699	ZZEF1 (ENSPKIG00000017736)	cyb5d2 (ENSPKIG00000017813)	ankfy1 (ENSPKIG00000017845)	UBE2G1 (ENSPKIG00000017909)	ENSPKIG00000017928 ##20	SPNS2 (ENSPKIG00000017965) ##20	ruvbl2 (ENSPKIG00000018065)	ftr83 (ENSPKIG00000018125)	ftr82 (ENSPKIG00000018164)	mis12 (ENSPKIG00000018214)	ift22 (ENSPKIG00000018200)	derl2 (ENSPKIG00000018226)	rabep1 (ENSPKIG00000018273) ##22	nup88 (ENSPKIG00000018374)	ENSPKIG00000018440	prkrip1 (ENSPKIG00000018451)	rasa4 (ENSPKIG00000018504)	CLIP2 (ENSPKIG00000018673)	GTF2IRD1 (ENSPKIG00000018845)	dtx2 (ENSPKIG00000018963)	tmem132e (ENSPKIG00000019008)	ENSPKIG00000019037	trpv1 (ENSPKIG00000019055)	SHPK (ENSPKIG00000019086)	p2rx5 (ENSPKIG00000019138)	emc6 (ENSPKIG00000019230)	UBB (ENSPKIG00000019243)	CENPV (ENSPKIG00000019290)
Spotted gar	MODERN SPECIES	661	ZZEF1 (ENSLOCG00000002640)	cyb5d2 (ENSLOCG00000002621)	ankfy1 (ENSLOCG00000002602)	ube2g1a (ENSLOCG00000002581)	ENSLOCG00000002570 ##20	ENSLOCG00000002558 ##20	SPNS2 (ENSLOCG00000002511) ##20	ENSLOCG00000002493	ruvbl2 (ENSLOCG00000002468)	ftr83 (ENSLOCG00000002447)	ftr82 (ENSLOCG00000002432)	ENSLOCG00000017422	mis12 (ENSLOCG00000017421)	ift22 (ENSLOCG00000002416)	derl2 (ENSLOCG00000002403)	rabep1 (ENSLOCG00000002386) ##22	nup88 (ENSLOCG00000002368)	ENSLOCG00000002350	prkrip1 (ENSLOCG00000002331)	rasa4 (ENSLOCG00000002287)	ENSLOCG00000002276	ENSLOCG00000002256	dtx2 (ENSLOCG00000002231)	ENSLOCG00000002222	GTF2IRD1 (ENSLOCG00000002184)	CLIP2 (ENSLOCG00000002159)	ENSLOCG00000017870	tmem132e (ENSLOCG00000002145)	lig3 (ENSLOCG00000002087)	ENSLOCG00000002059	rad51d (ENSLOCG00000002045)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	16	ENSECRG00000008147	ENSECRG00000008138	ENSECRG00000008077	ENSECRG00000008049	STX1A (ENSECRG00000008018)	bud23 (ENSECRG00000007971)	ENSECRG00000007955	SH2B2 (ENSECRG00000007934) ##26	ENSECRG00000007920	cux1b (ENSECRG00000007871)	MYL10 (ENSECRG00000007839)	COL26A1 (ENSECRG00000007820)	ift22 (ENSECRG00000007805)	mis12 (ENSECRG00000007794)	ENSECRG00000007778	rabep1 (ENSECRG00000007695) ##22	nup88 (ENSECRG00000007645)	TRIM50 (ENSECRG00000007603)	rffl (ENSECRG00000007580)	rfc2 (ENSECRG00000007502)	ENSECRG00000007450	orai2 (ENSECRG00000007438)	bckdk (ENSECRG00000007418)	lrwd1 (ENSECRG00000007399)	alkbh4 (ENSECRG00000007389)	polr2j (ENSECRG00000007380)	rasa4 (ENSECRG00000007351)	ENSECRG00000007337	ENSECRG00000007324	dtx2 (ENSECRG00000007309)	ENSECRG00000007294
Reedfish	MODERN SPECIES	568																ENSECRG00000018847 ##22
Sarcopterygii	ANCESTRAL SPECIES	168															ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Tetrapoda	ANCESTRAL SPECIES	13															ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Amniota	ANCESTRAL SPECIES	18	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000165137	ENSGT00940000170602	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Mammalia	ANCESTRAL SPECIES	37	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000170602	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Platypus	MODERN SPECIES	8	DTX2 (ENSOANG00000004296)	ENSOANG00000004297	ENSOANG00000015341	ENSOANG00000010016	ENSOANG00000020912	LRWD1 (ENSOANG00000042627)	ENSOANG00000050358	ENSOANG00000048842	ORAI2 (ENSOANG00000049789)	PRKRIP1 (ENSOANG00000046088)	CUX1 (ENSOANG00000028870)	MYL10 (ENSOANG00000022693)	ENSOANG00000047006	ENSOANG00000039913	IFT22 (ENSOANG00000043894)	RABEP1 (ENSOANG00000028473) ##22	NUP88 (ENSOANG00000037123)	RPAIN (ENSOANG00000022274)	C1QBP (ENSOANG00000047220)	DHX33 (ENSOANG00000046401)	DERL2 (ENSOANG00000046872)	MIS12 (ENSOANG00000000526)	CAMKK1 (ENSOANG00000013706)	P2RX1 (ENSOANG00000003459)	ATP2A3 (ENSOANG00000039300)	ZZEF1 (ENSOANG00000002387)	CYB5D2 (ENSOANG00000043791)	ANKFY1 (ENSOANG00000042469)	UBE2G1 (ENSOANG00000001220)	ENSOANG00000001961 ##20	ENSOANG00000042384
Theria	ANCESTRAL SPECIES	59																ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Eutheria	ANCESTRAL SPECIES	4	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00390000009241	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Eulipotyphla	ANCESTRAL SPECIES	87																ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b
Common shrew	MODERN SPECIES	1490																RABEP1 (ENSSARG00000009710) ##22	NUP88 (ENSSARG00000009746)	RPAIN (ENSSARG00000009767)	C1QBP (ENSSARG00000009793)	DHX33 (ENSSARG00000009813)	DERL2 (ENSSARG00000009832)
Hedgehog	MODERN SPECIES	2045																RABEP1 (ENSEEUG00000010273) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00910000147256	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Equus	ANCESTRAL SPECIES	31	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.g	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00910000147256	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Horse	MODERN SPECIES	2	GP1BA (ENSECAG00000040351)	SLC25A11 (ENSECAG00000022154)	RNF167 (ENSECAG00000021567)	ENSECAG00000041123	ENO3 (ENSECAG00000020400)	SPAG7 (ENSECAG00000019845)	CAMTA2 (ENSECAG00000019370)	INCA1 (ENSECAG00000018685)	KIF1C (ENSECAG00000017390)	ENSECAG00000050481	ENSECAG00000045708	ZFP3 (ENSECAG00000002496)	ENSECAG00000060384	ZNF594 (ENSECAG00000032331)	SCIMP (ENSECAG00000016938)	RABEP1 (ENSECAG00000014217) ##22	NUP88 (ENSECAG00000012800)	RPAIN (ENSECAG00000011789)	C1QBP (ENSECAG00000011765)	DHX33 (ENSECAG00000010272)	DERL2 (ENSECAG00000010247)	MIS12 (ENSECAG00000002238)	ENSECAG00000021116	NLRP1 (ENSECAG00000008523)	ENSECAG00000047226	WSCD1 (ENSECAG00000007661)	AIPL1 (ENSECAG00000007435)	PIMREG (ENSECAG00000006229)	PITPNM3 (ENSECAG00000025093)	ENSECAG00000041433	KIAA0753 (ENSECAG00000025021)
Donkey	MODERN SPECIES	4	C17orf107 (ENSEASG00005015417)	GP1BA (ENSEASG00005037399)	SLC25A11 (ENSEASG00005015404)	RNF167 (ENSEASG00005015398)	ENSEASG00005015397	ENO3 (ENSEASG00005015395)	SPAG7 (ENSEASG00005015392)	CAMTA2 (ENSEASG00005015389)	INCA1 (ENSEASG00005015386)	KIF1C (ENSEASG00005015383)	ZFP3 (ENSEASG00005015381)	ZNF232 (ENSEASG00005029825)	ENSEASG00005030488	ZNF594 (ENSEASG00005036342)	SCIMP (ENSEASG00005037654)	RABEP1 (ENSEASG00005015370) ##22	NUP88 (ENSEASG00005015366)	RPAIN (ENSEASG00005015365)	C1QBP (ENSEASG00005030788)	DHX33 (ENSEASG00005015338)	DERL2 (ENSEASG00005015337)	MIS12 (ENSEASG00005036646)	ENSEASG00005015335	ENSEASG00005015334	NLRP1 (ENSEASG00005015333)	ENSEASG00005035333	WSCD1 (ENSEASG00005015331)	ENSEASG00005015330	PIMREG (ENSEASG00005015329)	PITPNM3 (ENSEASG00005015328)	KIAA0753 (ENSEASG00005015326)
Chiroptera	ANCESTRAL SPECIES	29	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000161335.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT00390000000359
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000161335.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT00390000000359
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	13	MINK1 (ENSRFEG00010015649)	CHRNE (ENSRFEG00010015898)	GP1BA (ENSRFEG00010015942)	SLC25A11 (ENSRFEG00010016038)	RNF167 (ENSRFEG00010016182)	PFN1 (ENSRFEG00010016235)	ENO3 (ENSRFEG00010016338)	SPAG7 (ENSRFEG00010016441)	CAMTA2 (ENSRFEG00010016661)	INCA1 (ENSRFEG00010017361)	KIF1C (ENSRFEG00010017517)	ZFP3 (ENSRFEG00010017574)	ZNF594 (ENSRFEG00010017586)	ENSRFEG00010017610	ENSRFEG00010017657	ENSRFEG00010017700 ##22	NUP88 (ENSRFEG00010018079)	RPAIN (ENSRFEG00010018136)	C1QBP (ENSRFEG00010018277)	DHX33 (ENSRFEG00010018366)	DERL2 (ENSRFEG00010018455)	MIS12 (ENSRFEG00010018566)	ENSRFEG00010018580	NLRP1 (ENSRFEG00010018596)	ENSRFEG00010018617	WSCD1 (ENSRFEG00010018649)	AIPL1 (ENSRFEG00010018683)	PIMREG (ENSRFEG00010018718)	PITPNM3 (ENSRFEG00010018770)	KIAA0753 (ENSRFEG00010018831)	TXNDC17 (ENSRFEG00010018991)
Greater horseshoe bat	MODERN SPECIES	10	CEP192 (ENSRFEG00010009867)	SEH1L (ENSRFEG00010009932)	ENSRFEG00010010007	PTPN2 (ENSRFEG00010010030)	ENSRFEG00010010139	PSMG2 (ENSRFEG00010010190)	CEP76 (ENSRFEG00010010291)	SPIRE1 (ENSRFEG00010010443)	PRELID3A (ENSRFEG00010010757)	AFG3L2 (ENSRFEG00010010859)	TUBB6 (ENSRFEG00010010921)	CIDEA (ENSRFEG00010011034)	IMPA2 (ENSRFEG00010011097)	MPPE1 (ENSRFEG00010011175)	GNAL (ENSRFEG00010011263)	ENSRFEG00010011333 ##22	PIEZO2 (ENSRFEG00010011535)	ENSRFEG00010016335	ENSRFEG00010016354	NAPG (ENSRFEG00010016419)	APCDD1 (ENSRFEG00010016460)	VAPA (ENSRFEG00010016518)	ENSRFEG00010016552	RAB31 (ENSRFEG00010016775)	PPP4R1 (ENSRFEG00010016839)	RALBP1 (ENSRFEG00010016953)	ENSRFEG00010017006	TWSG1 (ENSRFEG00010017042)	ENSRFEG00010017125	ANKRD12 (ENSRFEG00010017178)	NDUFV2 (ENSRFEG00010017276)
Microbat	MODERN SPECIES	1362	GLTPD2 (ENSMLUG00000015627)	PSMB6 (ENSMLUG00000015631)	PLD2 (ENSMLUG00000015643)	MINK1 (ENSMLUG00000015661)	CHRNE (ENSMLUG00000015682)	SLC25A11 (ENSMLUG00000014049)	RNF167 (ENSMLUG00000014045)	ENSMLUG00000014043	ENO3 (ENSMLUG00000014039)	SPAG7 (ENSMLUG00000014031)	CAMTA2 (ENSMLUG00000014019)	KIF1C (ENSMLUG00000007604)	ZFP3 (ENSMLUG00000007598)	ENSMLUG00000004698	SCIMP (ENSMLUG00000007562)	RABEP1 (ENSMLUG00000014407) ##22	RPAIN (ENSMLUG00000014428)	C1QBP (ENSMLUG00000014435)	DHX33 (ENSMLUG00000014439)	DERL2 (ENSMLUG00000014450)	MIS12 (ENSMLUG00000016252)	NUP88 (ENSMLUG00000014421)	ENSMLUG00000027170	ENSMLUG00000028243
Megabat	MODERN SPECIES	279																RABEP1 (ENSPVAG00000002452) ##22	NUP88 (ENSPVAG00000002460)	RPAIN (ENSPVAG00000002465)	C1QBP (ENSPVAG00000002466)	DHX33 (ENSPVAG00000002467)	DERL2 (ENSPVAG00000002468)	MIS12 (ENSPVAG00000002469)
Carnivora	ANCESTRAL SPECIES	24	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Felidae	ANCESTRAL SPECIES	26	ENSGT00950000183196.A	ENSGT00980000201117	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
Cat	MODERN SPECIES	245	PLD2 (ENSFCAG00000008040)	MINK1 (ENSFCAG00000008041)	ENSFCAG00000045606	CHRNE (ENSFCAG00000038719)	GP1BA (ENSFCAG00000008042)	SLC25A11 (ENSFCAG00000028708)	RNF167 (ENSFCAG00000036967)	ENSFCAG00000011175	ENO3 (ENSFCAG00000001731)	SPAG7 (ENSFCAG00000030469)	CAMTA2 (ENSFCAG00000008698)	INCA1 (ENSFCAG00000008701)	KIF1C (ENSFCAG00000008703)	ZFP3 (ENSFCAG00000040246)	SCIMP (ENSFCAG00000040469)	RABEP1 (ENSFCAG00000013369) ##22	NUP88 (ENSFCAG00000025780)	RPAIN (ENSFCAG00000013372)	C1QBP (ENSFCAG00000026474)	DHX33 (ENSFCAG00000014755)	DERL2 (ENSFCAG00000030604)	MIS12 (ENSFCAG00000013374)	ENSFCAG00000052431	WSCD1 (ENSFCAG00000018089)	AIPL1 (ENSFCAG00000023174)	PIMREG (ENSFCAG00000013064)	PITPNM3 (ENSFCAG00000013065)	TXNDC17 (ENSFCAG00000024143)	MED31 (ENSFCAG00000044541)	KIAA0753 (ENSFCAG00000013068)	SLC13A5 (ENSFCAG00000013072)
Panthera	ANCESTRAL SPECIES	25	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
Tiger	MODERN SPECIES	361	C17orf114 (ENSPTIG00000007124)	PLD2 (ENSPTIG00000007599)	ENSPTIG00000010074	ENSPTIG00000010594	ENSPTIG00000011212	SLC25A11 (ENSPTIG00000011477)	RNF167 (ENSPTIG00000012646)	PFN1 (ENSPTIG00000015878)	ENO3 (ENSPTIG00000016766)	SPAG7 (ENSPTIG00000018325)	CAMTA2 (ENSPTIG00000018987)	INCA1 (ENSPTIG00000007630)	KIF1C (ENSPTIG00000010024)	ZFP3 (ENSPTIG00000004164)	ENSPTIG00000012350	RABEP1 (ENSPTIG00000013393) ##22	NUP88 (ENSPTIG00000014063)	RPAIN (ENSPTIG00000015485)	C1QBP (ENSPTIG00000017742)	DHX33 (ENSPTIG00000018141)	DERL2 (ENSPTIG00000019148)	MIS12 (ENSPTIG00000004476)	ENSPTIG00000021026	ENSPTIG00000021129
Panthera_a	ANCESTRAL SPECIES	28	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
lion	MODERN SPECIES	14	PSMB6 (ENSPLOG00000014781)	C17orf114 (ENSPLOG00000014908)	PLD2 (ENSPLOG00000014978)	MINK1 (ENSPLOG00000015438)	ENSPLOG00000015528	SLC25A11 (ENSPLOG00000015592)	RNF167 (ENSPLOG00000015740)	PFN1 (ENSPLOG00000015786)	ENO3 (ENSPLOG00000015833)	SPAG7 (ENSPLOG00000015921)	ENSPLOG00000016081	ENSPLOG00000016110	ENSPLOG00000016194	ENSPLOG00000016359	SCIMP (ENSPLOG00000016377)	RABEP1 (ENSPLOG00000016445) ##22	NUP88 (ENSPLOG00000016712)	RPAIN (ENSPLOG00000016916)	C1QBP (ENSPLOG00000017011)	DHX33 (ENSPLOG00000017113)	ENSPLOG00000017222	MIS12 (ENSPLOG00000017327)	WSCD1 (ENSPLOG00000017366)	ENSPLOG00000017415	PIMREG (ENSPLOG00000017473)	PITPNM3 (ENSPLOG00000017628)	KIAA0753 (ENSPLOG00000017923)	TXNDC17 (ENSPLOG00000018406)	MED31 (ENSPLOG00000018494)	SLC13A5 (ENSPLOG00000018606)	FBXO39 (ENSPLOG00000018957)
leopard	MODERN SPECIES	61	C17orf114 (ENSPPRG00000013888)	PLD2 (ENSPPRG00000013638)	MINK1 (ENSPPRG00000011854)	CHRNE (ENSPPRG00000007400)	SLC25A11 (ENSPPRG00000006630)	RNF167 (ENSPPRG00000006286)	ENSPPRG00000005717	ENO3 (ENSPPRG00000005476)	ENSPPRG00000004131	ENSPPRG00000003224	CAMTA2 (ENSPPRG00000002746)	INCA1 (ENSPPRG00000022521)	KIF1C (ENSPPRG00000020204)	ZFP3 (ENSPPRG00000015077)	SCIMP (ENSPPRG00000014489)	RABEP1 (ENSPPRG00000012709) ##22	NUP88 (ENSPPRG00000011767)	RPAIN (ENSPPRG00000010579)	C1QBP (ENSPPRG00000009460)	DHX33 (ENSPPRG00000009202)	DERL2 (ENSPPRG00000008310)	MIS12 (ENSPPRG00000014985)	WSCD1 (ENSPPRG00000007689)	AIPL1 (ENSPPRG00000006300)	PIMREG (ENSPPRG00000004302)	PITPNM3 (ENSPPRG00000003831)	ENSPPRG00000002622	ENSPPRG00000002491	TXNDC17 (ENSPPRG00000002123)	MED31 (ENSPPRG00000001765)	SLC13A5 (ENSPPRG00000001266)
Caniformia	ANCESTRAL SPECIES	27	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Canidae	ANCESTRAL SPECIES	30	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.m.a	ENSGT00520000059046	ENSGT00830000128447.c	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195.bb
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.m.a	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195.bb	ENSGT00390000015531
Dog	MODERN SPECIES	33	C17orf114 (ENSCAFG00845003771)	PLD2 (ENSCAFG00845003731)	MINK1 (ENSCAFG00845003651)	ENSCAFG00845003613	CHRNE (ENSCAFG00845003576)	SLC25A11 (ENSCAFG00845003533)	RNF167 (ENSCAFG00845003513)	ENSCAFG00845003501	ENO3 (ENSCAFG00845003474)	SPAG7 (ENSCAFG00845003432)	CAMTA2 (ENSCAFG00845003384)	INCA1 (ENSCAFG00845003342)	KIF1C (ENSCAFG00845003212)	ZFP3 (ENSCAFG00845003149)	ENSCAFG00845003109	RABEP1 (ENSCAFG00845003008) ##22	NUP88 (ENSCAFG00845002930)	RPAIN (ENSCAFG00845002763)	ENSCAFG00845002686	DHX33 (ENSCAFG00845002655)	DERL2 (ENSCAFG00845002594)	MIS12 (ENSCAFG00845002549)	ENSCAFG00845002532	NLRP1 (ENSCAFG00845002510)	WSCD1 (ENSCAFG00845002480)	AIPL1 (ENSCAFG00845002453)	PIMREG (ENSCAFG00845002416)	PITPNM3 (ENSCAFG00845002291)	KIAA0753 (ENSCAFG00845002219)	TXNDC17 (ENSCAFG00845002177)	SLC13A5 (ENSCAFG00845002144)
Dingo	MODERN SPECIES	175																RABEP1 (ENSCAFG00020016520) ##22	NUP88 (ENSCAFG00020016511)	RPAIN (ENSCAFG00020016509)	C1QBP (ENSCAFG00020016507)	DHX33 (ENSCAFG00020016360)	DERL2 (ENSCAFG00020016343)	ENSCAFG00020016338	ENSCAFG00020016283	WSCD1 (ENSCAFG00020016270)	AIPL1 (ENSCAFG00020016266)	PIMREG (ENSCAFG00020016264)	PITPNM3 (ENSCAFG00020016148)	KIAA0753 (ENSCAFG00020016130)	TXNDC17 (ENSCAFG00020016128)	MED31 (ENSCAFG00020016127)	ENSCAFG00020016126
Red fox	MODERN SPECIES	52	ENSVVUG00000027501	ENSVVUG00000027499	MINK1 (ENSVVUG00000027486)	CHRNE (ENSVVUG00000027481)	GP1BA (ENSVVUG00000027480)	SLC25A11 (ENSVVUG00000027478)	RNF167 (ENSVVUG00000027473)	ENSVVUG00000027471	ENO3 (ENSVVUG00000027463)	SPAG7 (ENSVVUG00000027459)	CAMTA2 (ENSVVUG00000027451)	INCA1 (ENSVVUG00000027447)	KIF1C (ENSVVUG00000027444)	ZFP3 (ENSVVUG00000027439)	ENSVVUG00000027438	RABEP1 (ENSVVUG00000027435) ##22	NUP88 (ENSVVUG00000027428)	RPAIN (ENSVVUG00000027424)	C1QBP (ENSVVUG00000027422)	DHX33 (ENSVVUG00000027336)	DERL2 (ENSVVUG00000027327)	ENSVVUG00000027322	ENSVVUG00000027311	ENSVVUG00000027308	WSCD1 (ENSVVUG00000027305)	AIPL1 (ENSVVUG00000027304)	PIMREG (ENSVVUG00000027300)	PITPNM3 (ENSVVUG00000027278)	KIAA0753 (ENSVVUG00000027265)	TXNDC17 (ENSVVUG00000027263)	MED31 (ENSVVUG00000027260)
Caniformia_b	ANCESTRAL SPECIES	28	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00980000201117	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531
Mustelinae	ANCESTRAL SPECIES	27	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00980000201117	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.b.b.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096.c	ENSGT00390000001289.b.b.k	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531
American mink	MODERN SPECIES	204	PLD2 (ENSNVIG00000019746)	MINK1 (ENSNVIG00000019577)	ENSNVIG00000019558	CHRNE (ENSNVIG00000019535)	ENSNVIG00000019524	SLC25A11 (ENSNVIG00000019484)	RNF167 (ENSNVIG00000019466)	ENSNVIG00000019461	ENO3 (ENSNVIG00000019419)	SPAG7 (ENSNVIG00000019383)	CAMTA2 (ENSNVIG00000019219)	INCA1 (ENSNVIG00000019213)	KIF1C (ENSNVIG00000019191)	ZFP3 (ENSNVIG00000019162)	SCIMP (ENSNVIG00000019137)	RABEP1 (ENSNVIG00000019060) ##22	NUP88 (ENSNVIG00000019029)	RPAIN (ENSNVIG00000018924)	C1QBP (ENSNVIG00000018886)	DHX33 (ENSNVIG00000018855)	DERL2 (ENSNVIG00000018845)	MIS12 (ENSNVIG00000018839)	NLRP1 (ENSNVIG00000018685)	WSCD1 (ENSNVIG00000018639)	AIPL1 (ENSNVIG00000018546)	PIMREG (ENSNVIG00000018494)	PITPNM3 (ENSNVIG00000018454)	KIAA0753 (ENSNVIG00000018421)	TXNDC17 (ENSNVIG00000018404)	MED31 (ENSNVIG00000018381)	SLC13A5 (ENSNVIG00000018329)
Ferret	MODERN SPECIES	237	PLD2 (ENSMPUG00000010843)	MINK1 (ENSMPUG00000010851)	CHRNE (ENSMPUG00000010857)	ENSMPUG00000010930	ENSMPUG00000019731	SLC25A11 (ENSMPUG00000010936)	RNF167 (ENSMPUG00000010940)	ENO3 (ENSMPUG00000010972)	SPAG7 (ENSMPUG00000010976)	CAMTA2 (ENSMPUG00000011010)	INCA1 (ENSMPUG00000011026)	KIF1C (ENSMPUG00000011034)	ZFP3 (ENSMPUG00000011049)	ENSMPUG00000011058	SCIMP (ENSMPUG00000011068)	RABEP1 (ENSMPUG00000011079) ##22	NUP88 (ENSMPUG00000011090)	RPAIN (ENSMPUG00000011214)	C1QBP (ENSMPUG00000011246)	DHX33 (ENSMPUG00000011250)	DERL2 (ENSMPUG00000011255)	MIS12 (ENSMPUG00000019732)	NLRP1 (ENSMPUG00000011266)	ENSMPUG00000011273	ENSMPUG00000011276	ENSMPUG00000011281	ENSMPUG00000011288	ENSMPUG00000011283	ENSMPUG00000011291	PIMREG (ENSMPUG00000011296)	PITPNM3 (ENSMPUG00000011309)
Ursidae	ANCESTRAL SPECIES	31	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00980000201117	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b.h	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000164860	ENSGT00390000009714.f	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
Giant Panda	MODERN SPECIES	8	GLTPD2 (ENSAMEG00000029815)	ENSAMEG00000016075	C17orf114 (ENSAMEG00000029559)	PLD2 (ENSAMEG00000016024)	MINK1 (ENSAMEG00000015946)	ENSAMEG00000025366	CHRNE (ENSAMEG00000027081)	RNF167 (ENSAMEG00000006392)	ENSAMEG00000029462	ENO3 (ENSAMEG00000006323)	SPAG7 (ENSAMEG00000006299)	CAMTA2 (ENSAMEG00000006258)	ENSAMEG00000028117	ENSAMEG00000006194	ENSAMEG00000026061	RABEP1 (ENSAMEG00000006130) ##22	NUP88 (ENSAMEG00000006054)	RPAIN (ENSAMEG00000006051)	ENSAMEG00000006043	DHX33 (ENSAMEG00000006026)	DERL2 (ENSAMEG00000006021)	MIS12 (ENSAMEG00000019161)	NLRP1 (ENSAMEG00000017199)	WSCD1 (ENSAMEG00000004306)	ENSAMEG00000028407	AIPL1 (ENSAMEG00000007004)	PITPNM3 (ENSAMEG00000027625)	ENSAMEG00000024947	TXNDC17 (ENSAMEG00000007038)	MED31 (ENSAMEG00000023748)	SLC13A5 (ENSAMEG00000028443)
Ursus	ANCESTRAL SPECIES	24	ENSGT00940000160229.b	ENSGT00940000160229.a	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b.h	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000164860	ENSGT00390000009714.f	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
Polar bear	MODERN SPECIES	147	PSMB6 (ENSUMAG00000014437)	ENSUMAG00000014431	ENSUMAG00000014426	MINK1 (ENSUMAG00000014020)	ENSUMAG00000013955	SLC25A11 (ENSUMAG00000013950)	RNF167 (ENSUMAG00000013928)	ENSUMAG00000013925	ENO3 (ENSUMAG00000013922)	SPAG7 (ENSUMAG00000013911)	CAMTA2 (ENSUMAG00000013894)	INCA1 (ENSUMAG00000013884)	KIF1C (ENSUMAG00000013599)	ZFP3 (ENSUMAG00000013566)	SCIMP (ENSUMAG00000013561)	RABEP1 (ENSUMAG00000013314) ##22	NUP88 (ENSUMAG00000013246)	RPAIN (ENSUMAG00000013239)	ENSUMAG00000013232	ENSUMAG00000013229	DERL2 (ENSUMAG00000013225)	MIS12 (ENSUMAG00000013222)	NLRP1 (ENSUMAG00000013197)	WSCD1 (ENSUMAG00000013181)	ENSUMAG00000013165	PIMREG (ENSUMAG00000013162)	KIAA0753 (ENSUMAG00000013100)	TXNDC17 (ENSUMAG00000013074)	MED31 (ENSUMAG00000013071)	SLC13A5 (ENSUMAG00000013021)	ENSUMAG00000013015
American black bear	DUPLICATION
American black bear	MODERN SPECIES	5468																RABEP1 (ENSUAMG00000024961) ##22
American black bear	MODERN SPECIES	6041																ENSUAMG00000012056 ##22
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Suina	ANCESTRAL SPECIES		ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT00390000000359
Chacoan peccary	MODERN SPECIES	67	MINK1 (ENSCWAG00000001579)	C17orf107 (ENSCWAG00000001549)	CHRNE (ENSCWAG00000001531)	ENSCWAG00000001518	SLC25A11 (ENSCWAG00000001482)	RNF167 (ENSCWAG00000001456)	ENSCWAG00000001443	ENO3 (ENSCWAG00000001414)	SPAG7 (ENSCWAG00000001372)	CAMTA2 (ENSCWAG00000000818)	INCA1 (ENSCWAG00000000702)	KIF1C (ENSCWAG00000000667)	ZFP3 (ENSCWAG00000000644)	ZNF232 (ENSCWAG00000000629)	ENSCWAG00000000609	RABEP1 (ENSCWAG00000000498) ##22	NUP88 (ENSCWAG00000000434)	RPAIN (ENSCWAG00000000379)	C1QBP (ENSCWAG00000000334)	DHX33 (ENSCWAG00000000295)	DERL2 (ENSCWAG00000000245)	MIS12 (ENSCWAG00000000207)	ENSCWAG00000000192	ENSCWAG00000000177	WSCD1 (ENSCWAG00000000144)	AIPL1 (ENSCWAG00000000095)	PIMREG (ENSCWAG00000000037)	PITPNM3 (ENSCWAG00000021820)	KIAA0753 (ENSCWAG00000021804)	TXNDC17 (ENSCWAG00000021790)	MED31 (ENSCWAG00000021780)
Pig	MODERN SPECIES	3	MINK1 (ENSSSCG00000017917)	C17orf107 (ENSSSCG00000051822)	CHRNE (ENSSSCG00000017909)	ENSSSCG00000058627	SLC25A11 (ENSSSCG00000032472)	RNF167 (ENSSSCG00000017906)	PFN1 (ENSSSCG00000017907)	ENO3 (ENSSSCG00000017904)	SPAG7 (ENSSSCG00000053757)	CAMTA2 (ENSSSCG00000017902)	INCA1 (ENSSSCG00000017901)	KIF1C (ENSSSCG00000017900)	ZNF232 (ENSSSCG00000022999)	ZNF594 (ENSSSCG00000017897)	SCIMP (ENSSSCG00000017896)	RABEP1 (ENSSSCG00000017895) ##22	NUP88 (ENSSSCG00000033706)	RPAIN (ENSSSCG00000036311)	C1QBP (ENSSSCG00000035048)	DHX33 (ENSSSCG00000039064)	DERL2 (ENSSSCG00000031530)	MIS12 (ENSSSCG00000034958)	ENSSSCG00000054603	WSCD1 (ENSSSCG00000017894)	AIPL1 (ENSSSCG00000022026)	PIMREG (ENSSSCG00000017893)	PITPNM3 (ENSSSCG00000017890)	TXNDC17 (ENSSSCG00000035820)	MED31 (ENSSSCG00000027100)	ENSSSCG00000033819	SLC13A5 (ENSSSCG00000017888)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00950000182890.D.c.a.a.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195.`b	ENSGT00390000015531	ENSGT00390000000359
Odontoceti	ANCESTRAL SPECIES	17	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00950000182890.D.c.a.a.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000008767.a.a.a.b.c.a	ENSGT00390000012195.`b	ENSGT00390000015531
Odontoceti_a	ANCESTRAL SPECIES	18	ENSGT00400000024234	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00950000182890.D.c.a.a.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000008767.a.a.a.b.c.a	ENSGT00390000012195.`b	ENSGT00390000015531
Odontoceti_b	ANCESTRAL SPECIES	20	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00950000182890.D.c.a.a.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000015531	ENSGT00390000000359	ENSGT01030000234550.a.a.c.a.b
Monodontidae	ANCESTRAL SPECIES	21	ENSGT00940000160933	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00950000182890.D.c.a.a.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000015531	ENSGT00390000000359	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Narwhal	MODERN SPECIES	316	CHRNE (ENSMMNG00015020899)	ENSMMNG00015020930	GP1BA (ENSMMNG00015020941)	SLC25A11 (ENSMMNG00015020966)	RNF167 (ENSMMNG00015021008)	ENSMMNG00015021046	ENO3 (ENSMMNG00015021089)	SPAG7 (ENSMMNG00015021251)	CAMTA2 (ENSMMNG00015021343)	INCA1 (ENSMMNG00015021526)	KIF1C (ENSMMNG00015021546)	ZFP3 (ENSMMNG00015021568)	ZNF232 (ENSMMNG00015021578)	ENSMMNG00015021591	SCIMP (ENSMMNG00015021601)	RABEP1 (ENSMMNG00015021623) ##22	NUP88 (ENSMMNG00015021657)	RPAIN (ENSMMNG00015021694)	C1QBP (ENSMMNG00015016016)	DHX33 (ENSMMNG00015016091)	DERL2 (ENSMMNG00015016179)	ENSMMNG00015016255	WSCD1 (ENSMMNG00015016286)	AIPL1 (ENSMMNG00015016343)	PIMREG (ENSMMNG00015016401)	PITPNM3 (ENSMMNG00015016453)	KIAA0753 (ENSMMNG00015016506)	ENSMMNG00015016544	ENSMMNG00015016578	MED31 (ENSMMNG00015016630)	C17orf100 (ENSMMNG00015016661)
Beluga whale	MODERN SPECIES	43	PLD2 (ENSDLEG00000016162)	MINK1 (ENSDLEG00000006228)	CHRNE (ENSDLEG00000005488)	GP1BA (ENSDLEG00000020097)	SLC25A11 (ENSDLEG00000020095)	RNF167 (ENSDLEG00000020089)	PFN1 (ENSDLEG00000020086)	ENO3 (ENSDLEG00000019950)	SPAG7 (ENSDLEG00000019933)	CAMTA2 (ENSDLEG00000019667)	INCA1 (ENSDLEG00000019615)	KIF1C (ENSDLEG00000019554)	ZNF232 (ENSDLEG00000019536)	ENSDLEG00000019526	SCIMP (ENSDLEG00000019518)	RABEP1 (ENSDLEG00000019468) ##22	NUP88 (ENSDLEG00000019452)	RPAIN (ENSDLEG00000019450)	C1QBP (ENSDLEG00000019446)	DHX33 (ENSDLEG00000019441)	DERL2 (ENSDLEG00000019434)	ENSDLEG00000019430	ENSDLEG00000019427	WSCD1 (ENSDLEG00000019411)	AIPL1 (ENSDLEG00000019293)	PIMREG (ENSDLEG00000019260)	PITPNM3 (ENSDLEG00000019172)	ENSDLEG00000019153	TXNDC17 (ENSDLEG00000019137)	KIAA0753 (ENSDLEG00000019121)	MED31 (ENSDLEG00000019107)
Vaquita	MODERN SPECIES	12	C17orf114 (ENSPSNG00000018920)	PLD2 (ENSPSNG00000018992)	MINK1 (ENSPSNG00000019208)	CHRNE (ENSPSNG00000019422)	C17orf107 (ENSPSNG00000019469)	GP1BA (ENSPSNG00000019515)	SLC25A11 (ENSPSNG00000019534)	RNF167 (ENSPSNG00000019617)	ENSPSNG00000019665	ENO3 (ENSPSNG00000019727)	SPAG7 (ENSPSNG00000020209)	CAMTA2 (ENSPSNG00000019830)	INCA1 (ENSPSNG00000020357)	KIF1C (ENSPSNG00000020452)	ZFP3 (ENSPSNG00000020529)	RABEP1 (ENSPSNG00000020571) ##22	ZNF232 (ENSPSNG00000020616)	ENSPSNG00000020671	NUP88 (ENSPSNG00000020729)	RPAIN (ENSPSNG00000020831)	C1QBP (ENSPSNG00000020925)	DHX33 (ENSPSNG00000020973)	DERL2 (ENSPSNG00000021052)	MIS12 (ENSPSNG00000021097)	ENSPSNG00000021114	WSCD1 (ENSPSNG00000021138)	AIPL1 (ENSPSNG00000021180)	PIMREG (ENSPSNG00000021225)	PITPNM3 (ENSPSNG00000021274)	KIAA0753 (ENSPSNG00000021450)	ENSPSNG00000013110
Dolphin	MODERN SPECIES	4057																RABEP1 (ENSTTRG00000014741) ##22	NUP88 (ENSTTRG00000014740)	RPAIN (ENSTTRG00000014739)	C1QBP (ENSTTRG00000014738)
Sperm whale	MODERN SPECIES	5	PLD2 (ENSPCTG00005018029)	C17orf114 (ENSPCTG00005018082)	PSMB6 (ENSPCTG00005018111)	GLTPD2 (ENSPCTG00005018163)	VMO1 (ENSPCTG00005018226)	TM4SF5 (ENSPCTG00005018329)	ZMYND15 (ENSPCTG00005018421)	ENSPCTG00005018832	MED11 (ENSPCTG00005018892)	ARRB2 (ENSPCTG00005019007)	ENSPCTG00005019030	ZFP3 (ENSPCTG00005019053)	ZNF232 (ENSPCTG00005019069)	ENSPCTG00005019152	SCIMP (ENSPCTG00005019166)	RABEP1 (ENSPCTG00005019309) ##22	NUP88 (ENSPCTG00005019412)	RPAIN (ENSPCTG00005019478)	C1QBP (ENSPCTG00005019884)	DHX33 (ENSPCTG00005019921)	DERL2 (ENSPCTG00005020029)	MIS12 (ENSPCTG00005020180)	ENSPCTG00005020195	WSCD1 (ENSPCTG00005020205)	KIAA0753 (ENSPCTG00005020247)	ENSPCTG00005020313	ENSPCTG00005020348	TXNDC17 (ENSPCTG00005020390)	ENSPCTG00005020460	GGT6 (ENSPCTG00005020481)	MYBBP1A (ENSPCTG00005020559)
Blue whale	MODERN SPECIES	12	PLD2 (ENSBMSG00010019799)	MINK1 (ENSBMSG00010019688)	CHRNE (ENSBMSG00010019581)	ENSBMSG00010019537	SLC25A11 (ENSBMSG00010019482)	RNF167 (ENSBMSG00010019432)	ENSBMSG00010019401	ENO3 (ENSBMSG00010019333)	CAMTA2 (ENSBMSG00010018574)	INCA1 (ENSBMSG00010018465)	KIF1C (ENSBMSG00010018350)	ENSBMSG00010018311	ZNF232 (ENSBMSG00010018267)	ENSBMSG00010018240	ENSBMSG00010018206	RABEP1 (ENSBMSG00010018134) ##22	NUP88 (ENSBMSG00010018074)	RPAIN (ENSBMSG00010017979)	C1QBP (ENSBMSG00010017913)	DHX33 (ENSBMSG00010017845)	DERL2 (ENSBMSG00010017766)	MIS12 (ENSBMSG00010017719)	ENSBMSG00010017697	WSCD1 (ENSBMSG00010017645)	AIPL1 (ENSBMSG00010017576)	PIMREG (ENSBMSG00010017519)	PITPNM3 (ENSBMSG00010017286)	ENSBMSG00010017218	KIAA0753 (ENSBMSG00010017140)	ENSBMSG00010017089	MED31 (ENSBMSG00010017056)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000160933	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Yarkand deer	MODERN SPECIES	28	MINK1 (ENSCHYG00000014993)	C17orf107 (ENSCHYG00000014813)	CHRNE (ENSCHYG00000014592)	GP1BA (ENSCHYG00000014558)	SLC25A11 (ENSCHYG00000014415)	RNF167 (ENSCHYG00000014226)	ENSCHYG00000014173	SPAG7 (ENSCHYG00000013899)	CAMTA2 (ENSCHYG00000012531)	ENO3 (ENSCHYG00000012293)	INCA1 (ENSCHYG00000012412)	KIF1C (ENSCHYG00000012155)	ZFP3 (ENSCHYG00000012121)	ZNF232 (ENSCHYG00000012090)	SCIMP (ENSCHYG00000012032)	RABEP1 (ENSCHYG00000011384) ##22	NUP88 (ENSCHYG00000011165)	RPAIN (ENSCHYG00000010883)	C1QBP (ENSCHYG00000010760)	DHX33 (ENSCHYG00000010660)	ENSCHYG00000010644	DERL2 (ENSCHYG00000010487)	ENSCHYG00000010463	ENSCHYG00000010434	NLRP1 (ENSCHYG00000010079)	WSCD1 (ENSCHYG00000009976)	AIPL1 (ENSCHYG00000009917)	ENSCHYG00000009790	PITPNM3 (ENSCHYG00000009515)	KIAA0753 (ENSCHYG00000009385)	ENSCHYG00000009364
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000160933	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Siberian musk deer	MODERN SPECIES	1135	MINK1 (ENSMMSG00000007286)	C17orf107 (ENSMMSG00000007213)	CHRNE (ENSMMSG00000007151)	GP1BA (ENSMMSG00000007133)	SLC25A11 (ENSMMSG00000007020)	RNF167 (ENSMMSG00000006951)	PFN1 (ENSMMSG00000006925)	ENO3 (ENSMMSG00000006853)	SPAG7 (ENSMMSG00000006770)	CAMTA2 (ENSMMSG00000005983)	INCA1 (ENSMMSG00000005865)	KIF1C (ENSMMSG00000005811)	ZFP3 (ENSMMSG00000005785)	ZNF232 (ENSMMSG00000005742)	SCIMP (ENSMMSG00000005716)	RABEP1 (ENSMMSG00000005527) ##22	NUP88 (ENSMMSG00000005443)	RPAIN (ENSMMSG00000004805)	C1QBP (ENSMMSG00000004696)	DHX33 (ENSMMSG00000004647)	DERL2 (ENSMMSG00000004608)	ENSMMSG00000004559	ENSMMSG00000004541	ENSMMSG00000012728	WSCD1 (ENSMMSG00000012646)	ENSMMSG00000012613	PIMREG (ENSMMSG00000012584)	PITPNM3 (ENSMMSG00000012535)	KIAA0753 (ENSMMSG00000012468)	TXNDC17 (ENSMMSG00000012379)	MED31 (ENSMMSG00000012348)
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.k	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Goat	MODERN SPECIES	10	ENSCHIG00000023176	PLD2 (ENSCHIG00000021296)	MINK1 (ENSCHIG00000012066)	CHRNE (ENSCHIG00000021805)	SLC25A11 (ENSCHIG00000019795)	RNF167 (ENSCHIG00000015931)	ENSCHIG00000025972	ENO3 (ENSCHIG00000019504)	SPAG7 (ENSCHIG00000025934)	CAMTA2 (ENSCHIG00000011135)	INCA1 (ENSCHIG00000011756)	KIF1C (ENSCHIG00000000772)	ZFP3 (ENSCHIG00000024044)	ENSCHIG00000012069	ZNF232 (ENSCHIG00000020438)	RABEP1 (ENSCHIG00000018990) ##22	NUP88 (ENSCHIG00000023339)	RPAIN (ENSCHIG00000026155)	C1QBP (ENSCHIG00000027244)	DHX33 (ENSCHIG00000014722)	DERL2 (ENSCHIG00000019376)	ENSCHIG00000008605	ENSCHIG00000010335	NLRP1 (ENSCHIG00000019608)	WSCD1 (ENSCHIG00000018362)	AIPL1 (ENSCHIG00000012203)	PIMREG (ENSCHIG00000019752)	PITPNM3 (ENSCHIG00000014659)	KIAA0753 (ENSCHIG00000018835)	TXNDC17 (ENSCHIG00000011573)	MED31 (ENSCHIG00000006236)
Rambouillet Sheep	MODERN SPECIES	2	CHRNE (ENSOARG00020025134)	C17orf107 (ENSOARG00020025154)	ENSOARG00020025171	GP1BA (ENSOARG00020025177)	SLC25A11 (ENSOARG00020025189)	RNF167 (ENSOARG00020025214)	ENSOARG00020025231	ENO3 (ENSOARG00020025244)	SPAG7 (ENSOARG00020025282)	CAMTA2 (ENSOARG00020025325)	INCA1 (ENSOARG00020025442)	KIF1C (ENSOARG00020025455)	ZFP3 (ENSOARG00020025473)	ZNF232 (ENSOARG00020025477)	ENSOARG00020025484	RABEP1 (ENSOARG00020025498) ##22	NUP88 (ENSOARG00020009973)	RPAIN (ENSOARG00020010132)	C1QBP (ENSOARG00020010423)	DHX33 (ENSOARG00020010492)	DERL2 (ENSOARG00020010646)	ENSOARG00020010759	ENSOARG00020010794	NLRP1 (ENSOARG00020010839)	WSCD1 (ENSOARG00020010998)	AIPL1 (ENSOARG00020011078)	PIMREG (ENSOARG00020011227)	PITPNM3 (ENSOARG00020011307)	KIAA0753 (ENSOARG00020011849)	TXNDC17 (ENSOARG00020012159)	MED31 (ENSOARG00020012281)
Bovinae	ANCESTRAL SPECIES		ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
American bison	MODERN SPECIES	3166	ENSBBBG00000003122	ENSBBBG00000014032	ENSBBBG00000014030	ENSBBBG00000014022	GP1BA (ENSBBBG00000003107)	SLC25A11 (ENSBBBG00000014018)	RNF167 (ENSBBBG00000014007)	PFN1 (ENSBBBG00000013983)	ENO3 (ENSBBBG00000003067)	SPAG7 (ENSBBBG00000013951)	CAMTA2 (ENSBBBG00000013925)	INCA1 (ENSBBBG00000001520)	KIF1C (ENSBBBG00000002904)	ZFP3 (ENSBBBG00000002965)	SCIMP (ENSBBBG00000002963)	RABEP1 (ENSBBBG00000013814) ##22	NUP88 (ENSBBBG00000008743)	RPAIN (ENSBBBG00000013756)	C1QBP (ENSBBBG00000013727)	DHX33 (ENSBBBG00000013722)	DERL2 (ENSBBBG00000013710)	MIS12 (ENSBBBG00000002890)	ENSBBBG00000013698	ENSBBBG00000007654	WSCD1 (ENSBBBG00000002826)	AIPL1 (ENSBBBG00000013589)	PIMREG (ENSBBBG00000013579)	PITPNM3 (ENSBBBG00000013556)	KIAA0753 (ENSBBBG00000008287)	TXNDC17 (ENSBBBG00000013508)	MED31 (ENSBBBG00000013498)
Bos	ANCESTRAL SPECIES	1	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b.c	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Hybrid Bos Indicus	MODERN SPECIES	10	PLD2 (ENSBIXG00005028272)	MINK1 (ENSBIXG00005028421)	C17orf107 (ENSBIXG00005028478)	CHRNE (ENSBIXG00005028499)	GP1BA (ENSBIXG00005028517)	SLC25A11 (ENSBIXG00005006641)	RNF167 (ENSBIXG00005028653)	ENSBIXG00005028693	ENO3 (ENSBIXG00005004975)	SPAG7 (ENSBIXG00005005067)	CAMTA2 (ENSBIXG00005001876)	INCA1 (ENSBIXG00005005198)	KIF1C (ENSBIXG00005001792)	ZFP3 (ENSBIXG00005029165)	SCIMP (ENSBIXG00005001729)	RABEP1 (ENSBIXG00005001571) ##22	RPAIN (ENSBIXG00005010218)	NUP88 (ENSBIXG00005010261)	DHX33 (ENSBIXG00005010287)	DERL2 (ENSBIXG00005010333)	MIS12 (ENSBIXG00005010357)	ENSBIXG00005010360	NLRP1 (ENSBIXG00005000871)	WSCD1 (ENSBIXG00005010449)	AIPL1 (ENSBIXG00005010465)	PIMREG (ENSBIXG00005010514)	PITPNM3 (ENSBIXG00005010581)	TXNDC17 (ENSBIXG00005000906)	KIAA0753 (ENSBIXG00005010647)	MED31 (ENSBIXG00005006776)	C17orf100 (ENSBIXG00005000924)
Cow	MODERN SPECIES	10	C19H17orf107 (ENSBTAG00000047992)	CHRNE (ENSBTAG00000004908)	GP1BA (ENSBTAG00000004909)	SLC25A11 (ENSBTAG00000004910)	RNF167 (ENSBTAG00000004913)	PFN1 (ENSBTAG00000004915)	ENO3 (ENSBTAG00000005534)	SPAG7 (ENSBTAG00000008590)	ENSBTAG00000055281	CAMTA2 (ENSBTAG00000008591)	INCA1 (ENSBTAG00000008593)	KIF1C (ENSBTAG00000001349)	ZFP3 (ENSBTAG00000003699)	ENSBTAG00000013906	SCIMP (ENSBTAG00000055017)	RABEP1 (ENSBTAG00000011505) ##22	NUP88 (ENSBTAG00000011507)	RPAIN (ENSBTAG00000025149)	C1QBP (ENSBTAG00000012739)	DHX33 (ENSBTAG00000032083)	DERL2 (ENSBTAG00000020431)	MIS12 (ENSBTAG00000020432)	ENSBTAG00000025126	NLRP1 (ENSBTAG00000020433)	ENSBTAG00000050735	WSCD1 (ENSBTAG00000015656)	AIPL1 (ENSBTAG00000008318)	PIMREG (ENSBTAG00000002981)	PITPNM3 (ENSBTAG00000002982)	KIAA0753 (ENSBTAG00000015593)	TXNDC17 (ENSBTAG00000054776)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a.e.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Wild yak	MODERN SPECIES	1865	PLD2 (ENSBMUG00000005160)	MINK1 (ENSBMUG00000005305)	CHRNE (ENSBMUG00000005446)	C17orf107 (ENSBMUG00000005457)	ENSBMUG00000005469	SLC25A11 (ENSBMUG00000005527)	RNF167 (ENSBMUG00000005552)	ENSBMUG00000005558	ENO3 (ENSBMUG00000005584)	SPAG7 (ENSBMUG00000005606)	CAMTA2 (ENSBMUG00000005663)	INCA1 (ENSBMUG00000005714)	KIF1C (ENSBMUG00000005740)	ZFP3 (ENSBMUG00000005766)	SCIMP (ENSBMUG00000005788)	RABEP1 (ENSBMUG00000005853) ##22	NUP88 (ENSBMUG00000005873)	RPAIN (ENSBMUG00000005979)	C1QBP (ENSBMUG00000006044)	DHX33 (ENSBMUG00000006050)	DERL2 (ENSBMUG00000006073)	MIS12 (ENSBMUG00000006092)	ENSBMUG00000006109	ENSBMUG00000006179
Domestic yak	MODERN SPECIES	10	PLD2 (ENSBGRG00000025781)	MINK1 (ENSBGRG00000026137)	CHRNE (ENSBGRG00000026201)	ENSBGRG00000026207	GP1BA (ENSBGRG00000026209)	SLC25A11 (ENSBGRG00000026226)	RNF167 (ENSBGRG00000026241)	PFN1 (ENSBGRG00000026249)	ENO3 (ENSBGRG00000026260)	SPAG7 (ENSBGRG00000026278)	CAMTA2 (ENSBGRG00000026325)	INCA1 (ENSBGRG00000026362)	KIF1C (ENSBGRG00000026385)	ZFP3 (ENSBGRG00000026403)	SCIMP (ENSBGRG00000026407)	RABEP1 (ENSBGRG00000026429) ##22	ENSBGRG00000026449	NUP88 (ENSBGRG00000010807)	RPAIN (ENSBGRG00000010922)	C1QBP (ENSBGRG00000011114)	DHX33 (ENSBGRG00000011213)	DERL2 (ENSBGRG00000011317)	ENSBGRG00000011569	ENSBGRG00000011601	ENSBGRG00000011637	WSCD1 (ENSBGRG00000011809)	AIPL1 (ENSBGRG00000011888)	PIMREG (ENSBGRG00000011969)	PITPNM3 (ENSBGRG00000012127)	KIAA0753 (ENSBGRG00000012574)	TXNDC17 (ENSBGRG00000013232)
Camelidae	ANCESTRAL SPECIES	91	ENSGT00850000133648	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Alpaca	MODERN SPECIES	3694																ENSVPAG00000012520 ##22	NUP88 (ENSVPAG00000012524)	DERL2 (ENSVPAG00000012525)
Arabian camel	MODERN SPECIES	7	ENSCDRG00005016221	PLD2 (ENSCDRG00005016141)	MINK1 (ENSCDRG00005015239)	C17orf107 (ENSCDRG00005015183)	CHRNE (ENSCDRG00005015111)	ENSCDRG00005015070	SLC25A11 (ENSCDRG00005014886)	RNF167 (ENSCDRG00005014819)	ENSCDRG00005014778	ENO3 (ENSCDRG00005014679)	SPAG7 (ENSCDRG00005014566)	ENSCDRG00005013837	ENSCDRG00005013759	KIF1C (ENSCDRG00005013695)	SCIMP (ENSCDRG00005013661)	RABEP1 (ENSCDRG00005013268) ##22	NUP88 (ENSCDRG00005013173)	RPAIN (ENSCDRG00005013025)	C1QBP (ENSCDRG00005012957)	DHX33 (ENSCDRG00005012790)	DERL2 (ENSCDRG00005012515)	MIS12 (ENSCDRG00005012489)	ENSCDRG00005012471	NLRP1 (ENSCDRG00005012391)	WSCD1 (ENSCDRG00005012315)	AIPL1 (ENSCDRG00005012233)	PIMREG (ENSCDRG00005012189)	PITPNM3 (ENSCDRG00005011786)	KIAA0753 (ENSCDRG00005011696)	TXNDC17 (ENSCDRG00005011526)	MED31 (ENSCDRG00005011460)
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Tree shrew	MODERN SPECIES	701																ENSTBEG00000004555 ##22	NUP88 (ENSTBEG00000006037)	RPAIN (ENSTBEG00000007575)	C1QBP (ENSTBEG00000008248)	DHX33 (ENSTBEG00000008531)	DERL2 (ENSTBEG00000009213)	MIS12 (ENSTBEG00000009376)	ENSTBEG00000009542
Glires	ANCESTRAL SPECIES	3	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Lagomorpha	ANCESTRAL SPECIES		ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00980000201117	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.m.b	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195.m	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b
Rabbit	MODERN SPECIES	10	MINK1 (ENSOCUG00000010204)	CHRNE (ENSOCUG00000010231)	ENSOCUG00000029060	GP1BA (ENSOCUG00000001099)	SLC25A11 (ENSOCUG00000001101)	RNF167 (ENSOCUG00000001104)	PFN1 (ENSOCUG00000001106)	ENO3 (ENSOCUG00000002108)	ENSOCUG00000001108	CAMTA2 (ENSOCUG00000001109)	INCA1 (ENSOCUG00000032954)	KIF1C (ENSOCUG00000025068)	ENSOCUG00000034911	ZNF232 (ENSOCUG00000029527)	SCIMP (ENSOCUG00000025793)	RABEP1 (ENSOCUG00000004778) ##22	NUP88 (ENSOCUG00000004787)	RPAIN (ENSOCUG00000004793)	DHX33 (ENSOCUG00000004805)	DERL2 (ENSOCUG00000004811)	MIS12 (ENSOCUG00000024925)	ENSOCUG00000027233	WSCD1 (ENSOCUG00000003426)	ENSOCUG00000022355	AIPL1 (ENSOCUG00000027395)	PIMREG (ENSOCUG00000002818)	PITPNM3 (ENSOCUG00000002824)	KIAA0753 (ENSOCUG00000002832)	ENSOCUG00000016557	MED31 (ENSOCUG00000016562)	SLC13A5 (ENSOCUG00000009885)
Pika	MODERN SPECIES	3131														ZNF232 (ENSOPRG00000013056)	SCIMP (ENSOPRG00000013070)	RABEP1 (ENSOPRG00000013083) ##22	NUP88 (ENSOPRG00000013112)	RPAIN (ENSOPRG00000013134)	C1QBP (ENSOPRG00000013150)	DHX33 (ENSOPRG00000013163)	DERL2 (ENSOPRG00000013176)	MIS12 (ENSOPRG00000013183)	ENSOPRG00000013188
Rodentia	ANCESTRAL SPECIES	4	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Kangaroo rat	MODERN SPECIES	338	Pld2 (ENSDORG00000000459)	Mink1 (ENSDORG00000008548)	Chrne (ENSDORG00000002362)	4930544D05Rik (ENSDORG00000027845)	Slc25a11 (ENSDORG00000011756)	ENSDORG00000024493	Pfn1 (ENSDORG00000029772)	ENSDORG00000027179	ENSDORG00000011760	Spag7 (ENSDORG00000011761)	Camta2 (ENSDORG00000011763)	ENSDORG00000001550	ENSDORG00000001555	Zfp3 (ENSDORG00000013955)	Scimp (ENSDORG00000028534)	Rabep1 (ENSDORG00000007460) ##22	Nup88 (ENSDORG00000007462)	Rpain (ENSDORG00000007467)	ENSDORG00000029038	Dhx33 (ENSDORG00000014344)	Derl2 (ENSDORG00000026480)	Wscd1 (ENSDORG00000010220)	Aipl1 (ENSDORG00000029045)	Pitpnm3 (ENSDORG00000007558)	ENSDORG00000012202	Txndc17 (ENSDORG00000025800)	Med31 (ENSDORG00000012204)	Fbxo39 (ENSDORG00000015547)	Smtnl2 (ENSDORG00000010818)	ENSDORG00000002112	Spns2 (ENSDORG00000000440) ##20
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Lesser Egyptian jerboa	MODERN SPECIES	138	Pld2 (ENSJJAG00000006796)	Mink1 (ENSJJAG00000004577)	4930544D05Rik (ENSJJAG00000021193)	Chrne (ENSJJAG00000019286)	Slc25a11 (ENSJJAG00000018601)	Rnf167 (ENSJJAG00000018350)	Pfn1 (ENSJJAG00000018051)	Eno3 (ENSJJAG00000015475)	Spag7 (ENSJJAG00000015351)	ENSJJAG00000015997	Inca1 (ENSJJAG00000013936)	Kif1c (ENSJJAG00000013019)	Msl3l2 (ENSJJAG00000012367)	Zfp3 (ENSJJAG00000013410)	Scimp (ENSJJAG00000010731)	Rabep1 (ENSJJAG00000000685) ##22	Nup88 (ENSJJAG00000021285)	ENSJJAG00000019423	ENSJJAG00000018783	Dhx33 (ENSJJAG00000016626)	Derl2 (ENSJJAG00000015902)	ENSJJAG00000013129	ENSJJAG00000000553	ENSJJAG00000000384
Muroidea	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.e	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.h.b	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Cricetinae	ANCESTRAL SPECIES		ENSGT00850000133648	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.e	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531
Chinese hamster chok1gshd	MODERN SPECIES	229	Pld2 (ENSCGRG00001011264)	Mink1 (ENSCGRG00001018182)	Chrne (ENSCGRG00001018302)	4930544D05Rik (ENSCGRG00001018941)	ENSCGRG00001010282	Slc25a11 (ENSCGRG00001010193)	ENSCGRG00001013146	ENSCGRG00001014928	Eno3 (ENSCGRG00001002677)	Spag7 (ENSCGRG00001009940)	Camta2 (ENSCGRG00001014620)	Inca1 (ENSCGRG00001009238)	Kif1c (ENSCGRG00001014329)	Zfp3 (ENSCGRG00001019231)	Scimp (ENSCGRG00001014394)	Rabep1 (ENSCGRG00001011784) ##22	Nup88 (ENSCGRG00001012336)	Rpain (ENSCGRG00001012989)	C1qbp (ENSCGRG00001011622)	Dhx33 (ENSCGRG00001023101)	Derl2 (ENSCGRG00001009976)	Mis12 (ENSCGRG00001009038)	6330403K07Rik (ENSCGRG00001010141)	ENSCGRG00001015551	ENSCGRG00001016564	ENSCGRG00001014478	ENSCGRG00001014996	ENSCGRG00001015540	Wscd1 (ENSCGRG00001018241)	Aipl1 (ENSCGRG00001020732)	Pimreg (ENSCGRG00001011530)
Golden Hamster	MODERN SPECIES	627	Vmo1 (ENSMAUG00000020174)	Gltpd2 (ENSMAUG00000019593)	Psmb6 (ENSMAUG00000020184)	Pld2 (ENSMAUG00000019402)	Mink1 (ENSMAUG00000019539)	Chrne (ENSMAUG00000007049)	Slc25a11 (ENSMAUG00000009726)	Rnf167 (ENSMAUG00000014242)	ENSMAUG00000013310	Eno3 (ENSMAUG00000014129)	Spag7 (ENSMAUG00000012986)	Camta2 (ENSMAUG00000011055)	Kif1c (ENSMAUG00000014058)	Zfp3 (ENSMAUG00000011636)	Scimp (ENSMAUG00000021547)	Rabep1 (ENSMAUG00000013939) ##22	Nup88 (ENSMAUG00000021416)	Rpain (ENSMAUG00000019584)	C1qbp (ENSMAUG00000020985)	Dhx33 (ENSMAUG00000011100)	Derl2 (ENSMAUG00000013807)	Mis12 (ENSMAUG00000012935)	6330403K07Rik (ENSMAUG00000021541)	ENSMAUG00000019662	Wscd1 (ENSMAUG00000014219)	Aipl1 (ENSMAUG00000012023)	Pimreg (ENSMAUG00000010744)	Pitpnm3 (ENSMAUG00000010515)	ENSMAUG00000011942	4930563E22Rik (ENSMAUG00000009173)	Slc13a5 (ENSMAUG00000009167)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.e	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.h.b	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Prairie vole	MODERN SPECIES	15	Pld2 (ENSMOCG00000014275)	Mink1 (ENSMOCG00000003039)	4930544D05Rik (ENSMOCG00000019838)	Chrne (ENSMOCG00000016242)	Gp1ba (ENSMOCG00000005824)	Slc25a11 (ENSMOCG00000005319)	ENSMOCG00000020407	ENSMOCG00000017548	Eno3 (ENSMOCG00000014349)	ENSMOCG00000010372	Camta2 (ENSMOCG00000017954)	Inca1 (ENSMOCG00000019820)	Kif1c (ENSMOCG00000011294)	Zfp3 (ENSMOCG00000019359)	Scimp (ENSMOCG00000018214)	Rabep1 (ENSMOCG00000015091) ##22	Nup88 (ENSMOCG00000003415)	Rpain (ENSMOCG00000017351)	C1qbp (ENSMOCG00000016668)	Dhx33 (ENSMOCG00000016069)	Derl2 (ENSMOCG00000007476)	ENSMOCG00000012380	6330403K07Rik (ENSMOCG00000007619)	ENSMOCG00000022753	Wscd1 (ENSMOCG00000002824)	Aipl1 (ENSMOCG00000020231)	Pimreg (ENSMOCG00000022744)	Pitpnm3 (ENSMOCG00000016318)	4933427D14Rik (ENSMOCG00000012919)	ENSMOCG00000011446	Med31 (ENSMOCG00000009878)
Northern American deer mouse	MODERN SPECIES	21	Gm40193 (ENSPEMG00000019146)	Pld2 (ENSPEMG00000014735)	Mink1 (ENSPEMG00000011895)	Chrne (ENSPEMG00000015308)	4930544D05Rik (ENSPEMG00000009391)	Slc25a11 (ENSPEMG00000017552)	Rnf167 (ENSPEMG00000016082)	ENSPEMG00000025000	Eno3 (ENSPEMG00000004894)	Spag7 (ENSPEMG00000008722)	Camta2 (ENSPEMG00000011888)	Inca1 (ENSPEMG00000015981)	Kif1c (ENSPEMG00000018974)	Zfp3 (ENSPEMG00000016714)	Scimp (ENSPEMG00000024658)	Rabep1 (ENSPEMG00000012163) ##22	Nup88 (ENSPEMG00000011563)	Rpain (ENSPEMG00000018191)	C1qbp (ENSPEMG00000011732)	Dhx33 (ENSPEMG00000016472)	Derl2 (ENSPEMG00000004422)	Mis12 (ENSPEMG00000024873)	6330403K07Rik (ENSPEMG00000026018)	ENSPEMG00000028834	ENSPEMG00000029650	ENSPEMG00000026636	ENSPEMG00000024911	ENSPEMG00000025815	ENSPEMG00000024671	ENSPEMG00000030661	ENSPEMG00000028882
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.e.b	ENSGT00830000128447	ENSGT00940000162176.e.a	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714
Mus	ANCESTRAL SPECIES	2	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.e.b	ENSGT00830000128447	ENSGT00940000162176.e.a	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.e.b	ENSGT00940000162176.e.a	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.e.b	ENSGT00940000162176.e.a	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00830000128447	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195	ENSGT00390000015531
Steppe mouse	MODERN SPECIES	2540						Rnf167 (ENSMSIG00000024909)	Pfn1 (ENSMSIG00000024892)	Eno3 (ENSMSIG00000024867)	Spag7 (ENSMSIG00000024853)	Camta2 (ENSMSIG00000024670)	Inca1 (ENSMSIG00000024645)	Kif1c (ENSMSIG00000024550)	ENSMSIG00000024543	Zfp3 (ENSMSIG00000024539)	ENSMSIG00000024527	Rabep1 (ENSMSIG00000024342) ##22	Nup88 (ENSMSIG00000024246)	Rpain (ENSMSIG00000024166)	C1qbp (ENSMSIG00000024150)	Dhx33 (ENSMSIG00000024114)	Derl2 (ENSMSIG00000024070)	Mis12 (ENSMSIG00000024063)	6330403K07Rik (ENSMSIG00000024059)	ENSMSIG00000023982	Nlrp1b (ENSMSIG00000023860)	ENSMSIG00000023828
spretus	MODERN SPECIES	2	Pld2 (MGP_SPRETEiJ_G0017474)	Mink1 (MGP_SPRETEiJ_G0017475)	Chrne (MGP_SPRETEiJ_G0017476)	4930544D05Rik (MGP_SPRETEiJ_G0017477)	Gp1ba (MGP_SPRETEiJ_G0017478)	Slc25a11 (MGP_SPRETEiJ_G0017479)	Rnf167 (MGP_SPRETEiJ_G0017480)	Pfn1 (MGP_SPRETEiJ_G0017481)	MGP_SPRETEiJ_G0017482	Spag7 (MGP_SPRETEiJ_G0017483)	Camta2 (MGP_SPRETEiJ_G0017484)	Inca1 (MGP_SPRETEiJ_G0017485)	Kif1c (MGP_SPRETEiJ_G0017486)	Zfp3 (MGP_SPRETEiJ_G0017487)	Scimp (MGP_SPRETEiJ_G0017488)	Rabep1 (MGP_SPRETEiJ_G0017489) ##22	Nup88 (MGP_SPRETEiJ_G0017490)	Rpain (MGP_SPRETEiJ_G0017491)	C1qbp (MGP_SPRETEiJ_G0017492)	Dhx33 (MGP_SPRETEiJ_G0017493)	Derl2 (MGP_SPRETEiJ_G0017494)	Mis12 (MGP_SPRETEiJ_G0017495)	MGP_SPRETEiJ_G0017496	Wscd1 (MGP_SPRETEiJ_G0017497)	Aipl1 (MGP_SPRETEiJ_G0017498)	Pimreg (MGP_SPRETEiJ_G0017499)	Pitpnm3 (MGP_SPRETEiJ_G0017500)	4933427D14Rik (MGP_SPRETEiJ_G0017501)	4933427D14Rik (MGP_SPRETEiJ_G0017502)	Txndc17 (MGP_SPRETEiJ_G0017503)	Med31 (MGP_SPRETEiJ_G0017504)
Mouse	MODERN SPECIES	2	Pld2 (ENSMUSG00000020828)	Mink1 (ENSMUSG00000020827)	Chrne (ENSMUSG00000014609)	4930544D05Rik (ENSMUSG00000087279)	Gp1ba (ENSMUSG00000050675)	Slc25a11 (ENSMUSG00000014606)	Rnf167 (ENSMUSG00000040746)	Pfn1 (ENSMUSG00000018293)	Eno3 (ENSMUSG00000060600)	Spag7 (ENSMUSG00000018287)	Camta2 (ENSMUSG00000040712)	Inca1 (ENSMUSG00000057054)	Kif1c (ENSMUSG00000020821)	Zfp3 (ENSMUSG00000043602)	Scimp (ENSMUSG00000057135)	Rabep1 (ENSMUSG00000020817) ##22	Nup88 (ENSMUSG00000040667)	Rpain (ENSMUSG00000018449)	C1qbp (ENSMUSG00000018446)	Dhx33 (ENSMUSG00000040620)	Derl2 (ENSMUSG00000018442)	Mis12 (ENSMUSG00000040599)	6330403K07Rik (ENSMUSG00000018451)	Nlrp1a (ENSMUSG00000069830)	Nlrp1b (ENSMUSG00000070390)	Wscd1 (ENSMUSG00000020811)	Aipl1 (ENSMUSG00000040554)	Pimreg (ENSMUSG00000020808)	Pitpnm3 (ENSMUSG00000040543)	4933427D14Rik (ENSMUSG00000020807)	4933427D14Rik (ENSMUSG00000107877)
Ryukyu mouse	MODERN SPECIES	2	Pld2 (MGP_CAROLIEiJ_G0016638)	Mink1 (MGP_CAROLIEiJ_G0016639)	Chrne (MGP_CAROLIEiJ_G0016640)	4930544D05Rik (MGP_CAROLIEiJ_G0016641)	Gp1ba (MGP_CAROLIEiJ_G0016642)	Slc25a11 (MGP_CAROLIEiJ_G0016643)	Rnf167 (MGP_CAROLIEiJ_G0016644)	Pfn1 (MGP_CAROLIEiJ_G0016645)	Eno3 (MGP_CAROLIEiJ_G0016646)	Spag7 (MGP_CAROLIEiJ_G0016647)	Camta2 (MGP_CAROLIEiJ_G0016648)	Inca1 (MGP_CAROLIEiJ_G0016649)	Kif1c (MGP_CAROLIEiJ_G0016650)	Zfp3 (MGP_CAROLIEiJ_G0016651)	Scimp (MGP_CAROLIEiJ_G0016652)	Rabep1 (MGP_CAROLIEiJ_G0016653) ##22	Nup88 (MGP_CAROLIEiJ_G0016654)	Rpain (MGP_CAROLIEiJ_G0016655)	C1qbp (MGP_CAROLIEiJ_G0016656)	Dhx33 (MGP_CAROLIEiJ_G0016657)	Derl2 (MGP_CAROLIEiJ_G0016658)	Mis12 (MGP_CAROLIEiJ_G0016659)	Wscd1 (MGP_CAROLIEiJ_G0016660)	Aipl1 (MGP_CAROLIEiJ_G0016661)	Pimreg (MGP_CAROLIEiJ_G0016662)	Pitpnm3 (MGP_CAROLIEiJ_G0016663)	4933427D14Rik (MGP_CAROLIEiJ_G0016664)	4933427D14Rik (MGP_CAROLIEiJ_G0016665)	Txndc17 (MGP_CAROLIEiJ_G0016666)	Med31 (MGP_CAROLIEiJ_G0016667)	Slc13a5 (MGP_CAROLIEiJ_G0016668)
Shrew mouse	MODERN SPECIES	5	Pld2 (MGP_PahariEiJ_G0017769)	Mink1 (MGP_PahariEiJ_G0017770)	Chrne (MGP_PahariEiJ_G0017771)	4930544D05Rik (MGP_PahariEiJ_G0017772)	MGP_PahariEiJ_G0017773	Slc25a11 (MGP_PahariEiJ_G0017774)	Rnf167 (MGP_PahariEiJ_G0017775)	Pfn1 (MGP_PahariEiJ_G0017776)	Eno3 (MGP_PahariEiJ_G0017777)	Spag7 (MGP_PahariEiJ_G0017778)	Camta2 (MGP_PahariEiJ_G0017779)	Inca1 (MGP_PahariEiJ_G0017780)	Kif1c (MGP_PahariEiJ_G0017781)	Zfp3 (MGP_PahariEiJ_G0017782)	Scimp (MGP_PahariEiJ_G0017783)	Rabep1 (MGP_PahariEiJ_G0017784) ##22	Nup88 (MGP_PahariEiJ_G0017785)	Rpain (MGP_PahariEiJ_G0017786)	C1qbp (MGP_PahariEiJ_G0017787)	Dhx33 (MGP_PahariEiJ_G0017788)	Derl2 (MGP_PahariEiJ_G0017789)	Mis12 (MGP_PahariEiJ_G0017790)	MGP_PahariEiJ_G0017791	Nlrp1b (MGP_PahariEiJ_G0017792)	Wscd1 (MGP_PahariEiJ_G0017793)	Aipl1 (MGP_PahariEiJ_G0017794)	Pimreg (MGP_PahariEiJ_G0017795)	Pitpnm3 (MGP_PahariEiJ_G0017796)	4933427D14Rik (MGP_PahariEiJ_G0017797)	4933427D14Rik (MGP_PahariEiJ_G0017798)	Txndc17 (MGP_PahariEiJ_G0017799)
Rat	MODERN SPECIES	1	Mink1 (ENSRNOG00000033508)	Chrne (ENSRNOG00000003777)	LOC687707 (ENSRNOG00000042847)	Rpl36al (ENSRNOG00000031315)	Gp1ba (ENSRNOG00000025959)	Slc25a11 (ENSRNOG00000003815)	Rnf167 (ENSRNOG00000003879)	Pfn1 (ENSRNOG00000003975)	Eno3 (ENSRNOG00000004078)	Spag7 (ENSRNOG00000004246)	Camta2 (ENSRNOG00000004283)	Inca1 (ENSRNOG00000037418)	Kif1c (ENSRNOG00000031364)	Zfp3 (ENSRNOG00000005009)	Scimp (ENSRNOG00000037409)	Rabep1 (ENSRNOG00000005015) ##22	Nup88 (ENSRNOG00000006126)	Rpain (ENSRNOG00000006913)	C1qbp (ENSRNOG00000006949)	Dhx33 (ENSRNOG00000007054)	Derl2 (ENSRNOG00000055466)	Mis12 (ENSRNOG00000066036)	LOC691995 (ENSRNOG00000059827)	Nlrp1a (ENSRNOG00000023143)	Nlrp1b (ENSRNOG00000048125)	ENSRNOG00000063936	Wscd1 (ENSRNOG00000007869)	Aipl1 (ENSRNOG00000007889)	Pimreg (ENSRNOG00000008040)	Pitpnm3 (ENSRNOG00000008323)	RGD1304728 (ENSRNOG00000014027)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1746	Psmb6 (ENSNGAG00000003013)	Gm40193 (ENSNGAG00000007167)	Pld2 (ENSNGAG00000011882)	Mink1 (ENSNGAG00000018553)	Chrne (ENSNGAG00000021566)	Slc25a11 (ENSNGAG00000017111)	Rnf167 (ENSNGAG00000017627)	ENSNGAG00000018238	Eno3 (ENSNGAG00000019342)	Spag7 (ENSNGAG00000020042)	ENSNGAG00000021354	Inca1 (ENSNGAG00000021917)	Kif1c (ENSNGAG00000024165)	Zfp3 (ENSNGAG00000014808)	Scimp (ENSNGAG00000015620)	Rabep1 (ENSNGAG00000019825) ##22	Nup88 (ENSNGAG00000011975)	Rpain (ENSNGAG00000001760)	C1qbp (ENSNGAG00000015829)	Dhx33 (ENSNGAG00000017139)	Derl2 (ENSNGAG00000018194)	Mis12 (ENSNGAG00000020078)	ENSNGAG00000020772	ENSNGAG00000021256	ENSNGAG00000021949
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Sciuridae	ANCESTRAL SPECIES	25	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Eurasian red squirrel	MODERN SPECIES	12	PFN1 (ENSSVLG00005012149)	ENO3 (ENSSVLG00005012264)	SPAG7 (ENSSVLG00005012361)	ENSSVLG00005012585	CAMTA2 (ENSSVLG00005012676)	INCA1 (ENSSVLG00005013041)	KIF1C (ENSSVLG00005013143)	ENSSVLG00005013210	ZFP3 (ENSSVLG00005013333)	ZNF232 (ENSSVLG00005013374)	ENSSVLG00005013408	ENSSVLG00005013440	SCIMP (ENSSVLG00005013585)	ENSSVLG00005013649	ENSSVLG00005013751	RABEP1 (ENSSVLG00005013880) ##22	ENSSVLG00005010734	NUP88 (ENSSVLG00005010768)	RPAIN (ENSSVLG00005010858)	ENSSVLG00005011043	DHX33 (ENSSVLG00005011159)	DERL2 (ENSSVLG00005011333)	MIS12 (ENSSVLG00005011416)	ENSSVLG00005011435	NLRP1 (ENSSVLG00005011558)	WSCD1 (ENSSVLG00005012425)	AIPL1 (ENSSVLG00005012617)	PIMREG (ENSSVLG00005013051)	PITPNM3 (ENSSVLG00005013384)	KIAA0753 (ENSSVLG00005013510)	ENSSVLG00005013558
Marmotini	ANCESTRAL SPECIES	61	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Alpin marmot	MODERN SPECIES	108	PLD2 (ENSMMMG00000017774)	MINK1 (ENSMMMG00000017807)	CHRNE (ENSMMMG00000017991)	C17orf107 (ENSMMMG00000018019)	SLC25A11 (ENSMMMG00000018049)	RNF167 (ENSMMMG00000018051)	PFN1 (ENSMMMG00000018063)	ENO3 (ENSMMMG00000018102)	SPAG7 (ENSMMMG00000018135)	CAMTA2 (ENSMMMG00000018149)	INCA1 (ENSMMMG00000018336)	KIF1C (ENSMMMG00000018377)	ZFP3 (ENSMMMG00000018465)	ZNF232 (ENSMMMG00000018469)	SCIMP (ENSMMMG00000018474)	RABEP1 (ENSMMMG00000018485) ##22	NUP88 (ENSMMMG00000018531)	RPAIN (ENSMMMG00000018561)	C1QBP (ENSMMMG00000018608)	DHX33 (ENSMMMG00000018620)	DERL2 (ENSMMMG00000018635)	MIS12 (ENSMMMG00000018643)	NLRP1 (ENSMMMG00000018651)	WSCD1 (ENSMMMG00000018694)	AIPL1 (ENSMMMG00000018725)	PIMREG (ENSMMMG00000018731)	PITPNM3 (ENSMMMG00000018752)	ENSMMMG00000018788	KIAA0753 (ENSMMMG00000018791)	TXNDC17 (ENSMMMG00000018827)	ENSMMMG00000018831
Marmotini_b	ANCESTRAL SPECIES	67	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Arctic ground squirrel	MODERN SPECIES	129									ABCD2 (ENSUPAG00010018433)	KIF21A (ENSUPAG00010018462)	CPNE8 (ENSUPAG00010019198)	ENSUPAG00010019216	SYT10 (ENSUPAG00010019220)	ENSUPAG00010019229	SCIMP (ENSUPAG00010019232)	RABEP1 (ENSUPAG00010019239) ##22	NUP88 (ENSUPAG00010019368)	RPAIN (ENSUPAG00010019401)	C1QBP (ENSUPAG00010019445)	DHX33 (ENSUPAG00010019456)	DERL2 (ENSUPAG00010019469)	MIS12 (ENSUPAG00010019479)	ENSUPAG00010019484	NLRP1 (ENSUPAG00010019486)	WSCD1 (ENSUPAG00010019506)	AIPL1 (ENSUPAG00010019522)	PIMREG (ENSUPAG00010019534)	PITPNM3 (ENSUPAG00010019544)	KIAA0753 (ENSUPAG00010019561)	TXNDC17 (ENSUPAG00010019591)	MED31 (ENSUPAG00010019595)
Squirrel	MODERN SPECIES	277	PLD2 (ENSSTOG00000014880)	MINK1 (ENSSTOG00000014902)	C17orf107 (ENSSTOG00000011171)	CHRNE (ENSSTOG00000011161)	SLC25A11 (ENSSTOG00000011178)	RNF167 (ENSSTOG00000021495)	PFN1 (ENSSTOG00000028950)	ENO3 (ENSSTOG00000000675)	SPAG7 (ENSSTOG00000020965)	CAMTA2 (ENSSTOG00000011183)	INCA1 (ENSSTOG00000011198)	KIF1C (ENSSTOG00000012573)	ZFP3 (ENSSTOG00000021828)	ZNF232 (ENSSTOG00000012570)	SCIMP (ENSSTOG00000001058)	RABEP1 (ENSSTOG00000003225) ##22	NUP88 (ENSSTOG00000003253)	RPAIN (ENSSTOG00000003273)	C1QBP (ENSSTOG00000003289)	DHX33 (ENSSTOG00000003298)	DERL2 (ENSSTOG00000020586)	ENSSTOG00000003315	NLRP1 (ENSSTOG00000012657)	WSCD1 (ENSSTOG00000024674)	AIPL1 (ENSSTOG00000023737)	ENSSTOG00000011580	PITPNM3 (ENSSTOG00000011585)	KIAA0753 (ENSSTOG00000003666)	TXNDC17 (ENSSTOG00000021986)	MED31 (ENSSTOG00000021567)	SLC13A5 (ENSSTOG00000008356)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176.i	ENSGT00940000162176.j	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00740000117028	ENSGT00390000009714
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176.i	ENSGT00940000162176.j	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Hystricomorpha_b	ANCESTRAL SPECIES	22	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000162176.i	ENSGT00940000162176.j	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Long-tailed chinchilla	MODERN SPECIES	174	CHRNE (ENSCLAG00000007843)	C17orf107 (ENSCLAG00000009586)	GP1BA (ENSCLAG00000007601)	SLC25A11 (ENSCLAG00000010215)	RNF167 (ENSCLAG00000012731)	PFN1 (ENSCLAG00000010321)	ENO3 (ENSCLAG00000012900)	SPAG7 (ENSCLAG00000010659)	CAMTA2 (ENSCLAG00000008978)	INCA1 (ENSCLAG00000007945)	KIF1C (ENSCLAG00000012688)	ENSCLAG00000007638	ENSCLAG00000011713	ZNF232 (ENSCLAG00000007840)	SCIMP (ENSCLAG00000011695)	RABEP1 (ENSCLAG00000016358) ##22	NUP88 (ENSCLAG00000012899)	RPAIN (ENSCLAG00000009046)	C1QBP (ENSCLAG00000012553)	DHX33 (ENSCLAG00000014171)	DERL2 (ENSCLAG00000008765)	MIS12 (ENSCLAG00000010982)	ENSCLAG00000007948	ENSCLAG00000016776	ENSCLAG00000010449	WSCD1 (ENSCLAG00000007877)	AIPL1 (ENSCLAG00000010759)	PIMREG (ENSCLAG00000008735)	PITPNM3 (ENSCLAG00000011528)	KIAA0753 (ENSCLAG00000012157)	TXNDC17 (ENSCLAG00000009421)
Degu	MODERN SPECIES	139	MINK1 (ENSODEG00000017323)	C17orf107 (ENSODEG00000017120)	CHRNE (ENSODEG00000017005)	SLC25A11 (ENSODEG00000017177)	ENSODEG00000017013	ENSODEG00000017158	ENO3 (ENSODEG00000017250)	ENSODEG00000017626	ENSODEG00000016887	INCA1 (ENSODEG00000017076)	KIF1C (ENSODEG00000017049)	ENSODEG00000016994	ZFP3 (ENSODEG00000020398)	ZNF232 (ENSODEG00000016845)	SCIMP (ENSODEG00000017150)	RABEP1 (ENSODEG00000017178) ##22	NUP88 (ENSODEG00000017074)	RPAIN (ENSODEG00000016860)	ENSODEG00000016744	DHX33 (ENSODEG00000017026)	DERL2 (ENSODEG00000017040)	ENSODEG00000020440	ENSODEG00000017171	ENSODEG00000017048	ENSODEG00000017106	ENSODEG00000016653	WSCD1 (ENSODEG00000016638)	AIPL1 (ENSODEG00000016462)	ENSODEG00000016504	PITPNM3 (ENSODEG00000016603)	ENSODEG00000017470
Guinea pig	MODERN SPECIES	61	PLD2 (ENSCPOG00000006319)	MINK1 (ENSCPOG00000004996)	CHRNE (ENSCPOG00000024620)	C17orf107 (ENSCPOG00000033335)	SLC25A11 (ENSCPOG00000005008)	RNF167 (ENSCPOG00000023602)	PFN1 (ENSCPOG00000039087)	ENO3 (ENSCPOG00000013139)	SPAG7 (ENSCPOG00000006020)	CAMTA2 (ENSCPOG00000007319)	INCA1 (ENSCPOG00000007328)	KIF1C (ENSCPOG00000008798)	ZFP3 (ENSCPOG00000040109)	ZNF232 (ENSCPOG00000037004)	SCIMP (ENSCPOG00000038096)	RABEP1 (ENSCPOG00000003663) ##22	NUP88 (ENSCPOG00000003668)	RPAIN (ENSCPOG00000003675)	C1QBP (ENSCPOG00000003680)	DHX33 (ENSCPOG00000003681)	DERL2 (ENSCPOG00000031150)	ENSCPOG00000033573
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000017176	PSMD13 (ENSHGLG00000017609)	SIRT3 (ENSHGLG00000017649)	RIC8A (ENSHGLG00000018718)	BET1L (ENSHGLG00000049253)	ODF3 (ENSHGLG00000017967)	ENSHGLG00000017977	ENSHGLG00000008863	ENSHGLG00000000614	ENSHGLG00000042162	ENSHGLG00000000399	ENSHGLG00000009321	ENSHGLG00000009379	ENSHGLG00000048422	ENSHGLG00000004775	ENSHGLG00000036302 ##22	ENSHGLG00000036746	ENSHGLG00000013205	VGLL2 (ENSHGLG00000048393)	RFX6 (ENSHGLG00000019573)	GPRC6A (ENSHGLG00000036750)	ENSHGLG00000008946	KPNA5 (ENSHGLG00000007645)	ENSHGLG00000009896	ENSHGLG00000002525	ENSHGLG00000049438	ENSHGLG00000035661	ENSHGLG00000050402	ENSHGLG00000005874	ENSHGLG00000016052	ENSHGLG00000035693
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000049648	CHRNE (ENSHGLG00000009887)	GP1BA (ENSHGLG00000035686)	SLC25A11 (ENSHGLG00000013874)	RNF167 (ENSHGLG00000018301)	ENSHGLG00000014723	ENO3 (ENSHGLG00000009653)	ENSHGLG00000009748	ENSHGLG00000012913	INCA1 (ENSHGLG00000019317)	KIF1C (ENSHGLG00000013258)	ZFP3 (ENSHGLG00000035212)	ZNF232 (ENSHGLG00000032532)	ENSHGLG00000038391	SCIMP (ENSHGLG00000016934)	RABEP1 (ENSHGLG00000019170) ##22	NUP88 (ENSHGLG00000012891)	ENSHGLG00000007836	C1QBP (ENSHGLG00000009586)	DHX33 (ENSHGLG00000014753)	MIS12 (ENSHGLG00000047248)	DERL2 (ENSHGLG00000011135)	ENSHGLG00000033113	ENSHGLG00000048193	ENSHGLG00000037250	ENSHGLG00000013848	ENSHGLG00000047766	ENSHGLG00000040120	ENSHGLG00000012038	BCL6B (ENSHGLG00000013098)	C17orf49 (ENSHGLG00000009897)
Primates	ANCESTRAL SPECIES	3	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000009241	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Haplorrhini	ANCESTRAL SPECIES	34	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000009241	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Tarsier	MODERN SPECIES	1229																RABEP1 (ENSTSYG00000008814) ##22	NUP88 (ENSTSYG00000005391)	RPAIN (ENSTSYG00000005428)	C1QBP (ENSTSYG00000005434)	DHX33 (ENSTSYG00000005995)	DERL2 (ENSTSYG00000027882)	ENSTSYG00000032999	NLRP1 (ENSTSYG00000012450)
Simiiformes	ANCESTRAL SPECIES	23	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.l	ENSGT00950000182805.a.a.b.b.m.a	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Mas night monkey	MODERN SPECIES	649	ENSANAG00000032025	SLC25A11 (ENSANAG00000034058)	RNF167 (ENSANAG00000034776)	PFN1 (ENSANAG00000002125)	ENSANAG00000020318	SPAG7 (ENSANAG00000020862)	CAMTA2 (ENSANAG00000031565)	INCA1 (ENSANAG00000038026)	KIF1C (ENSANAG00000029960)	ENSANAG00000033130	SLC52A1 (ENSANAG00000024730)	ZFP3 (ENSANAG00000019832)	ZNF232 (ENSANAG00000037004)	ZNF594 (ENSANAG00000023997)	SCIMP (ENSANAG00000033409)	RABEP1 (ENSANAG00000028248) ##22	NUP88 (ENSANAG00000032703)	RPAIN (ENSANAG00000028660)	ENSANAG00000032527	DHX33 (ENSANAG00000037748)	ENSANAG00000031099	MIS12 (ENSANAG00000015438)	ENSANAG00000009039	NLRP1 (ENSANAG00000000698)	ENSANAG00000035878	WSCD1 (ENSANAG00000037707)	AIPL1 (ENSANAG00000030357)	PIMREG (ENSANAG00000009437)	PITPNM3 (ENSANAG00000029454)	KIAA0753 (ENSANAG00000025158)	ENSANAG00000037706
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.l	ENSGT00950000182805.a.a.b.b.m.a.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531.h.b
Marmoset	MODERN SPECIES	17	MINK1 (ENSCJAG00000011830)	CHRNE (ENSCJAG00000011799)	C17orf107 (ENSCJAG00000042888)	GP1BA (ENSCJAG00000076324)	SLC25A11 (ENSCJAG00000011768)	RNF167 (ENSCJAG00000011735)	ENSCJAG00000011679	SPAG7 (ENSCJAG00000011659)	CAMTA2 (ENSCJAG00000011609)	INCA1 (ENSCJAG00000011599)	KIF1C (ENSCJAG00000011553)	SLC52A1 (ENSCJAG00000011543)	ZFP3 (ENSCJAG00000057438)	ZNF232 (ENSCJAG00000011531)	SCIMP (ENSCJAG00000011513)	RABEP1 (ENSCJAG00000011449) ##22	NUP88 (ENSCJAG00000011424)	RPAIN (ENSCJAG00000011370)	C1QBP (ENSCJAG00000011352)	DHX33 (ENSCJAG00000011321)	DERL2 (ENSCJAG00000047067)	MIS12 (ENSCJAG00000022816)	ENSCJAG00000073356	NLRP1 (ENSCJAG00000011265)	ENSCJAG00000077877	WSCD1 (ENSCJAG00000011240)	AIPL1 (ENSCJAG00000011209)	ENSCJAG00000011205	PITPNM3 (ENSCJAG00000011178)	ENSCJAG00000082659	TXNDC17 (ENSCJAG00000011150)
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.l.a	ENSGT00950000182805.a.a.b.b.m.a.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b.c	ENSGT00390000018665	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531.h.b	ENSGT00390000000378.d.a
Bolivian squirrel monkey	MODERN SPECIES	86	PLD2 (ENSSBOG00000020607)	MINK1 (ENSSBOG00000026606)	C17orf107 (ENSSBOG00000020770)	CHRNE (ENSSBOG00000025593)	ENSSBOG00000021988	SLC25A11 (ENSSBOG00000035344)	RNF167 (ENSSBOG00000035841)	ENSSBOG00000027658	ENSSBOG00000025533	CAMTA2 (ENSSBOG00000019570)	INCA1 (ENSSBOG00000022084)	KIF1C (ENSSBOG00000034658)	ZFP3 (ENSSBOG00000017379)	ZNF232 (ENSSBOG00000026199)	SCIMP (ENSSBOG00000032132)	RABEP1 (ENSSBOG00000023251) ##22	NUP88 (ENSSBOG00000032719)	RPAIN (ENSSBOG00000028497)	ENSSBOG00000033195	DHX33 (ENSSBOG00000020529)	DERL2 (ENSSBOG00000026472)	MIS12 (ENSSBOG00000019638)	NLRP1 (ENSSBOG00000025041)	WSCD1 (ENSSBOG00000029527)	AIPL1 (ENSSBOG00000023311)	PIMREG (ENSSBOG00000030261)	PITPNM3 (ENSSBOG00000021421)	KIAA0753 (ENSSBOG00000020862)	ENSSBOG00000026545	ENSSBOG00000024596	DYNLL2 (ENSSBOG00000035553)
Capuchin	MODERN SPECIES	223	CHRNE (ENSCCAG00000031749)	ENSCCAG00000000126	SLC25A11 (ENSCCAG00000028651)	RNF167 (ENSCCAG00000027914)	PFN1 (ENSCCAG00000032015)	ENSCCAG00000025703	SPAG7 (ENSCCAG00000020801)	CAMTA2 (ENSCCAG00000024967)	INCA1 (ENSCCAG00000030711)	KIF1C (ENSCCAG00000028024)	SLC52A1 (ENSCCAG00000030301)	ZFP3 (ENSCCAG00000019666)	ZNF232 (ENSCCAG00000032143)	ZNF594 (ENSCCAG00000035158)	SCIMP (ENSCCAG00000029211)	RABEP1 (ENSCCAG00000035262) ##22
Catarrhini	ANCESTRAL SPECIES	24	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Hominoidea	ANCESTRAL SPECIES	25	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Hominidae	ANCESTRAL SPECIES	20	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000162039.B.b	ENSGT01030000234576.D.a.b.b.a.a.a	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000162039.B.b	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Gorilla	MODERN SPECIES	8	GP1BA (ENSGGOG00000000217)	SLC25A11 (ENSGGOG00000000218)	RNF167 (ENSGGOG00000000219)	ENSGGOG00000022394	ENO3 (ENSGGOG00000009170)	SPAG7 (ENSGGOG00000009180)	CAMTA2 (ENSGGOG00000009188)	INCA1 (ENSGGOG00000009204)	KIF1C (ENSGGOG00000009210)	SLC52A1 (ENSGGOG00000015663)	ZFP3 (ENSGGOG00000023389)	ZNF232 (ENSGGOG00000014373)	ENSGGOG00000014377	ZNF594 (ENSGGOG00000010311)	SCIMP (ENSGGOG00000025481)	RABEP1 (ENSGGOG00000002724) ##22	NUP88 (ENSGGOG00000002734)	RPAIN (ENSGGOG00000002740)	C1QBP (ENSGGOG00000002745)	DHX33 (ENSGGOG00000002748)	DERL2 (ENSGGOG00000010624)	MIS12 (ENSGGOG00000010632)	ENSGGOG00000043905	NLRP1 (ENSGGOG00000011464)	WSCD1 (ENSGGOG00000004145)	AIPL1 (ENSGGOG00000013836)	PIMREG (ENSGGOG00000012309)	PITPNM3 (ENSGGOG00000012316)	KIAA0753 (ENSGGOG00000000299)	ENSGGOG00000036204	TXNDC17 (ENSGGOG00000003055)
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000155797.v.b	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Pan	ANCESTRAL SPECIES	3	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.p	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000155797.v.b	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000009241	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Bonobo	MODERN SPECIES	8	SLC25A11 (ENSPPAG00000041545)	RNF167 (ENSPPAG00000038506)	ENSPPAG00000041198	ENO3 (ENSPPAG00000039862)	SPAG7 (ENSPPAG00000039878)	CAMTA2 (ENSPPAG00000031841)	INCA1 (ENSPPAG00000038786)	KIF1C (ENSPPAG00000040572)	SLC52A1 (ENSPPAG00000038549)	ZFP3 (ENSPPAG00000025379)	ZNF232 (ENSPPAG00000039209)	ENSPPAG00000042312	ENSPPAG00000038453	ZNF594 (ENSPPAG00000036921)	SCIMP (ENSPPAG00000025583)	RABEP1 (ENSPPAG00000031465) ##22	NUP88 (ENSPPAG00000029496)	RPAIN (ENSPPAG00000031332)	C1QBP (ENSPPAG00000030140)	DHX33 (ENSPPAG00000038926)	DERL2 (ENSPPAG00000029561)	MIS12 (ENSPPAG00000007020)	ENSPPAG00000033193	NLRP1 (ENSPPAG00000038277)	WSCD1 (ENSPPAG00000042670)	AIPL1 (ENSPPAG00000006089)	PIMREG (ENSPPAG00000030798)	PITPNM3 (ENSPPAG00000027409)	KIAA0753 (ENSPPAG00000034574)	TXNDC17 (ENSPPAG00000032552)	MED31 (ENSPPAG00000037832)
Chimpanzee	MODERN SPECIES	8	GP1BA (ENSPTRG00000031002)	SLC25A11 (ENSPTRG00000008614)	RNF167 (ENSPTRG00000008615)	PFN1 (ENSPTRG00000008616)	ENO3 (ENSPTRG00000008617)	SPAG7 (ENSPTRG00000008618)	CAMTA2 (ENSPTRG00000023129)	INCA1 (ENSPTRG00000022733)	KIF1C (ENSPTRG00000008620)	SLC52A1 (ENSPTRG00000008621)	ZFP3 (ENSPTRG00000052066)	ZNF232 (ENSPTRG00000008623)	USP6 (ENSPTRG00000008624)	ENSPTRG00000008625	SCIMP (ENSPTRG00000008626)	RABEP1 (ENSPTRG00000008628) ##22	NUP88 (ENSPTRG00000008629)	RPAIN (ENSPTRG00000008630)	C1QBP (ENSPTRG00000008631)	DHX33 (ENSPTRG00000008632)	DERL2 (ENSPTRG00000008634)	MIS12 (ENSPTRG00000008635)	ENSPTRG00000050376	NLRP1 (ENSPTRG00000008637)	WSCD1 (ENSPTRG00000008639)	AIPL1 (ENSPTRG00000008640)	PIMREG (ENSPTRG00000008641)	PITPNM3 (ENSPTRG00000008642)	KIAA0753 (ENSPTRG00000008643)	TXNDC17 (ENSPTRG00000008644)	MED31 (ENSPTRG00000008645)
Human	MODERN SPECIES	8	GP1BA (ENSG00000185245)	SLC25A11 (ENSG00000108528)	RNF167 (ENSG00000108523)	PFN1 (ENSG00000108518)	ENO3 (ENSG00000108515)	SPAG7 (ENSG00000091640)	CAMTA2 (ENSG00000108509)	INCA1 (ENSG00000196388)	KIF1C (ENSG00000129250)	SLC52A1 (ENSG00000132517)	ZFP3 (ENSG00000180787)	ZNF232 (ENSG00000167840)	USP6 (ENSG00000129204)	ZNF594 (ENSG00000180626)	SCIMP (ENSG00000161929)	RABEP1 (ENSG00000029725) ##22	NUP88 (ENSG00000108559)	RPAIN (ENSG00000129197)	C1QBP (ENSG00000108561)	DHX33 (ENSG00000005100)	DERL2 (ENSG00000072849)	MIS12 (ENSG00000167842)	NLRP1 (ENSG00000091592)	ENSG00000286190	ENSG00000285471	WSCD1 (ENSG00000179314)	AIPL1 (ENSG00000129221)	PIMREG (ENSG00000129195)	PITPNM3 (ENSG00000091622)	KIAA0753 (ENSG00000198920)	ENSG00000282936
Orangutan	MODERN SPECIES	8	SLC25A11 (ENSPPYG00000007848)	RNF167 (ENSPPYG00000007849)	ENSPPYG00000007850	ENO3 (ENSPPYG00000007851)	SPAG7 (ENSPPYG00000007852)	CAMTA2 (ENSPPYG00000007853)	ENSPPYG00000007854	KIF1C (ENSPPYG00000007855)	SLC52A1 (ENSPPYG00000007858)	ZFP3 (ENSPPYG00000007859)	ZNF232 (ENSPPYG00000007860)	ENSPPYG00000037512	ENSPPYG00000008942	ENSPPYG00000029739	SCIMP (ENSPPYG00000007865)	RABEP1 (ENSPPYG00000007866) ##22	NUP88 (ENSPPYG00000007867)	ENSPPYG00000007868	C1QBP (ENSPPYG00000007870)	DHX33 (ENSPPYG00000007871)	DERL2 (ENSPPYG00000007872)	MIS12 (ENSPPYG00000007873)	ENSPPYG00000040624	NLRP1 (ENSPPYG00000007874)	WSCD1 (ENSPPYG00000007875)	AIPL1 (ENSPPYG00000007876)	ENSPPYG00000007877	PITPNM3 (ENSPPYG00000007878)	KIAA0753 (ENSPPYG00000007879)	TXNDC17 (ENSPPYG00000032819)	MED31 (ENSPPYG00000039424)
Gibbon	MODERN SPECIES	9	GP1BA (ENSNLEG00000017428)	SLC25A11 (ENSNLEG00000031301)	RNF167 (ENSNLEG00000017437)	ENSNLEG00000033439	ENO3 (ENSNLEG00000017447)	ENSNLEG00000017451	CAMTA2 (ENSNLEG00000017452)	INCA1 (ENSNLEG00000017457)	ENSNLEG00000027124	KIF1C (ENSNLEG00000030145)	SLC52A1 (ENSNLEG00000008961)	ZFP3 (ENSNLEG00000032092)	ENSNLEG00000033401	ZNF232 (ENSNLEG00000018255)	SCIMP (ENSNLEG00000034146)	RABEP1 (ENSNLEG00000008985) ##22	NUP88 (ENSNLEG00000009043)	RPAIN (ENSNLEG00000009055)	C1QBP (ENSNLEG00000034024)	ENSNLEG00000009098	DERL2 (ENSNLEG00000009109)	MIS12 (ENSNLEG00000018256)	ENSNLEG00000030915	NLRP1 (ENSNLEG00000009130)	WSCD1 (ENSNLEG00000034898)	AIPL1 (ENSNLEG00000009147)	ENSNLEG00000009164	PITPNM3 (ENSNLEG00000009183)	KIAA0753 (ENSNLEG00000009195)	TXNDC17 (ENSNLEG00000034458)	ENSNLEG00000035117
Cercopithecidae	ANCESTRAL SPECIES	26	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00520000059046	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Rhinopithecus	ANCESTRAL SPECIES	6	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n.t.a	ENSGT00950000182805.a.a.b.b.o	ENSGT00950000182805.a.a.b.b.p	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Black snub-nosed monkey	MODERN SPECIES	1512	ENSRBIG00000028035	ZNF132 (ENSRBIG00000035909)	ZNF584 (ENSRBIG00000030480)	RNF225 (ENSRBIG00000038283)	RPS5 (ENSRBIG00000027783)	A1BG (ENSRBIG00000037266)	ZSCAN22 (ENSRBIG00000040402)	ENSRBIG00000032477	ZNF274 (ENSRBIG00000030386)	ZNF329 (ENSRBIG00000041052)	ENSRBIG00000028584	ZSCAN18 (ENSRBIG00000043152)	ZNF135 (ENSRBIG00000034624)	ZSCAN1 (ENSRBIG00000044636)	SCIMP (ENSRBIG00000018843)	RABEP1 (ENSRBIG00000041426) ##22	NUP88 (ENSRBIG00000043260)	RPAIN (ENSRBIG00000011156)	C1QBP (ENSRBIG00000029102)	DHX33 (ENSRBIG00000040087)	DERL2 (ENSRBIG00000041456)	ENSRBIG00000034181	ENSRBIG00000004989	NLRP1 (ENSRBIG00000042202)	WSCD1 (ENSRBIG00000043202)	PIMREG (ENSRBIG00000029806)	AIPL1 (ENSRBIG00000024550)	PITPNM3 (ENSRBIG00000029210)	KIAA0753 (ENSRBIG00000036428)	ENSRBIG00000041982	TXNDC17 (ENSRBIG00000023947)
Golden snub-nosed monkey	MODERN SPECIES	3027												ZFP3 (ENSRROG00000016740)	ENSRROG00000034022	ZNF232 (ENSRROG00000025813)	SCIMP (ENSRROG00000030162)	RABEP1 (ENSRROG00000032793) ##22	NUP88 (ENSRROG00000043571)	RPAIN (ENSRROG00000041520)	C1QBP (ENSRROG00000009932)	DHX33 (ENSRROG00000038052)	DERL2 (ENSRROG00000041853)	ENSRROG00000022608	ENSRROG00000036010	NLRP1 (ENSRROG00000045139)
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00520000059046	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Vervet Monkey	MODERN SPECIES	7	CHRNE (ENSCSAG00000012986)	C17orf107 (ENSCSAG00000012958)	GP1BA (ENSCSAG00000012953)	SLC25A11 (ENSCSAG00000012946)	RNF167 (ENSCSAG00000012939)	PFN1 (ENSCSAG00000012934)	ENO3 (ENSCSAG00000012928)	ENSCSAG00000012921	CAMTA2 (ENSCSAG00000012903)	INCA1 (ENSCSAG00000012888)	ENSCSAG00000012879	SLC52A1 (ENSCSAG00000012870)	ZFP3 (ENSCSAG00000000570)	ZNF232 (ENSCSAG00000012857)	SCIMP (ENSCSAG00000012849)	RABEP1 (ENSCSAG00000012836) ##22	NUP88 (ENSCSAG00000012818)	RPAIN (ENSCSAG00000012808)	C1QBP (ENSCSAG00000012802)	DHX33 (ENSCSAG00000012784)	DERL2 (ENSCSAG00000012730)	ENSCSAG00000000569	NLRP1 (ENSCSAG00000012704)	WSCD1 (ENSCSAG00000012648)	ENSCSAG00000000568	AIPL1 (ENSCSAG00000012634)	PIMREG (ENSCSAG00000012600)	PITPNM3 (ENSCSAG00000012577)	KIAA0753 (ENSCSAG00000012555)	TXNDC17 (ENSCSAG00000012482)	MED31 (ENSCSAG00000012467)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00520000059046	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Cercopithecinae_b	ANCESTRAL SPECIES	26	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f.b	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00520000059046	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028
Olive baboon	MODERN SPECIES	8	C17orf114 (ENSPANG00000035012)	PLD2 (ENSPANG00000024330)	MINK1 (ENSPANG00000024332)	CHRNE (ENSPANG00000024324)	ENSPANG00000050962	GP1BA (ENSPANG00000024310)	SLC25A11 (ENSPANG00000024311)	RNF167 (ENSPANG00000024312)	PFN1 (ENSPANG00000024313)	ENO3 (ENSPANG00000024314)	SPAG7 (ENSPANG00000035296)	CAMTA2 (ENSPANG00000024316)	INCA1 (ENSPANG00000024318)	KIF1C (ENSPANG00000024319)	SCIMP (ENSPANG00000029803)	RABEP1 (ENSPANG00000024293) ##22	NUP88 (ENSPANG00000024295)	ENSPANG00000031716	C1QBP (ENSPANG00000032113)	DHX33 (ENSPANG00000024297)	DERL2 (ENSPANG00000033077)	MIS12 (ENSPANG00000044544)	ENSPANG00000033668	WSCD1 (ENSPANG00000024300)	AIPL1 (ENSPANG00000024292)	PIMREG (ENSPANG00000024291)	KIAA0753 (ENSPANG00000024255)	ENSPANG00000045871	TXNDC17 (ENSPANG00000024256)	MED31 (ENSPANG00000024257)	SLC13A5 (ENSPANG00000024258)
Cercopithecinae_d	ANCESTRAL SPECIES	14	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f.b	ENSGT00940000162652	ENSGT00910000147508	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Drill	MODERN SPECIES	1146	CHRNE (ENSMLEG00000034705)	ENSMLEG00000041915	SLC25A11 (ENSMLEG00000041420)	RNF167 (ENSMLEG00000039051)	PFN1 (ENSMLEG00000042209)	ENO3 (ENSMLEG00000034286)	ENSMLEG00000030960	SPAG7 (ENSMLEG00000035561)	CAMTA2 (ENSMLEG00000033585)	INCA1 (ENSMLEG00000041693)	KIF1C (ENSMLEG00000035596)	SLC52A1 (ENSMLEG00000011467)	ZFP3 (ENSMLEG00000025892)	ZNF232 (ENSMLEG00000036590)	SCIMP (ENSMLEG00000035368)	RABEP1 (ENSMLEG00000033874) ##22	NUP88 (ENSMLEG00000040540)	RPAIN (ENSMLEG00000036331)	C1QBP (ENSMLEG00000044173)	DHX33 (ENSMLEG00000034236)	DERL2 (ENSMLEG00000041266)	ENSMLEG00000026945	ENSMLEG00000036188	NLRP1 (ENSMLEG00000028547)	WSCD1 (ENSMLEG00000027723)	AIPL1 (ENSMLEG00000032466)	PIMREG (ENSMLEG00000029186)	PITPNM3 (ENSMLEG00000040159)	KIAA0753 (ENSMLEG00000038909)	TXNDC17 (ENSMLEG00000033275)	MED31 (ENSMLEG00000031887)
Sooty mangabey	MODERN SPECIES	111	CHRNE (ENSCATG00000042709)	GP1BA (ENSCATG00000041985)	SLC25A11 (ENSCATG00000041298)	RNF167 (ENSCATG00000030368)	PFN1 (ENSCATG00000027796)	PLD2 (ENSCATG00000038931)	SPAG7 (ENSCATG00000043749)	CAMTA2 (ENSCATG00000030694)	INCA1 (ENSCATG00000019374)	KIF1C (ENSCATG00000035069)	SLC52A1 (ENSCATG00000009680)	ZFP3 (ENSCATG00000008687)	ENSCATG00000021895	ZNF232 (ENSCATG00000030396)	SCIMP (ENSCATG00000040963)	RABEP1 (ENSCATG00000044026) ##22	NUP88 (ENSCATG00000035026)	RPAIN (ENSCATG00000034115)	C1QBP (ENSCATG00000041387)	DHX33 (ENSCATG00000029157)	DERL2 (ENSCATG00000036505)	ENSCATG00000022669	ENSCATG00000040231	NLRP1 (ENSCATG00000036133)	WSCD1 (ENSCATG00000044708)	AIPL1 (ENSCATG00000045158)	PIMREG (ENSCATG00000042647)	PITPNM3 (ENSCATG00000042731)	KIAA0753 (ENSCATG00000044583)	TXNDC17 (ENSCATG00000018281)	MED31 (ENSCATG00000034418)
Macaca	ANCESTRAL SPECIES	4	ENSGT00400000024234	ENSGT00940000165601	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063.f	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Pig-tailed macaque	MODERN SPECIES	94	ENSMNEG00000028596	GP1BA (ENSMNEG00000042814)	SLC25A11 (ENSMNEG00000038231)	RNF167 (ENSMNEG00000034100)	PFN1 (ENSMNEG00000044222)	ENO3 (ENSMNEG00000032233)	SPAG7 (ENSMNEG00000018568)	CAMTA2 (ENSMNEG00000037116)	INCA1 (ENSMNEG00000031116)	KIF1C (ENSMNEG00000028548)	SLC52A1 (ENSMNEG00000028457)	ZFP3 (ENSMNEG00000024399)	ZNF232 (ENSMNEG00000029740)	ENSMNEG00000005396	SCIMP (ENSMNEG00000033387)	RABEP1 (ENSMNEG00000034024) ##22	NUP88 (ENSMNEG00000040349)	RPAIN (ENSMNEG00000033025)	C1QBP (ENSMNEG00000043841)	DHX33 (ENSMNEG00000034809)	DERL2 (ENSMNEG00000040049)	ENSMNEG00000023615	ENSMNEG00000041127	NLRP1 (ENSMNEG00000033796)	WSCD1 (ENSMNEG00000038627)	AIPL1 (ENSMNEG00000031725)	ENSMNEG00000043135	PITPNM3 (ENSMNEG00000030165)	KIAA0753 (ENSMNEG00000031263)	TXNDC17 (ENSMNEG00000008040)	MED31 (ENSMNEG00000041198)
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000165601	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063.f	ENSGT00390000006416	ENSGT00390000018406.i	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665.c	ENSGT00910000147256	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128.c.b	ENSGT01030000240215	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531
Rhesus	MODERN SPECIES	7	CHRNE (ENSMMUG00000002409)	C16H17orf107 (ENSMMUG00000059199)	GP1BA (ENSMMUG00000002763)	SLC25A11 (ENSMMUG00000002765)	RNF167 (ENSMMUG00000002769)	PFN1 (ENSMMUG00000051787)	ENO3 (ENSMMUG00000012040)	SPAG7 (ENSMMUG00000054585)	CAMTA2 (ENSMMUG00000009176)	INCA1 (ENSMMUG00000009175)	KIF1C (ENSMMUG00000011341)	SLC52A1 (ENSMMUG00000011344)	ZFP3 (ENSMMUG00000056095)	ENSMMUG00000018648	SCIMP (ENSMMUG00000057987)	RABEP1 (ENSMMUG00000010465) ##22	NUP88 (ENSMMUG00000010467)	RPAIN (ENSMMUG00000010468)	C1QBP (ENSMMUG00000006592)	DHX33 (ENSMMUG00000006594)	DERL2 (ENSMMUG00000006599)	MIS12 (ENSMMUG00000046195)	ENSMMUG00000043771	NLRP1 (ENSMMUG00000030453)	ENSMMUG00000051517	WSCD1 (ENSMMUG00000010014)	AIPL1 (ENSMMUG00000017759)	PIMREG (ENSMMUG00000017760)	ENSMMUG00000056174	PITPNM3 (ENSMMUG00000017763)	TXNDC17 (ENSMMUG00000056814)
Crab-eating macaque	DUPLICATION
Crab-eating macaque	MODERN SPECIES	7	PSMB6 (ENSMFAG00000045002)	C17orf114 (ENSMFAG00000002553)	PLD2 (ENSMFAG00000003242)	MINK1 (ENSMFAG00000035913)	CHRNE (ENSMFAG00000000833)	SLC25A11 (ENSMFAG00000038676)	RNF167 (ENSMFAG00000039590)	PFN1 (ENSMFAG00000045520)	SPAG7 (ENSMFAG00000032008)	CAMTA2 (ENSMFAG00000031758)	INCA1 (ENSMFAG00000041330)	KIF1C (ENSMFAG00000038587)	SLC52A1 (ENSMFAG00000043362)	ZFP3 (ENSMFAG00000047727)	SCIMP (ENSMFAG00000063582)	ENSMFAG00000061481 ##22	ENSMFAG00000048161	DERL2 (ENSMFAG00000042300)	MIS12 (ENSMFAG00000056878)	ENSMFAG00000059931	ENSMFAG00000051807	NLRP1 (ENSMFAG00000059959)	WSCD1 (ENSMFAG00000003388)	AIPL1 (ENSMFAG00000031819)	PIMREG (ENSMFAG00000040994)	ENSMFAG00000049090	KIAA0753 (ENSMFAG00000039868)	TXNDC17 (ENSMFAG00000029520)	MED31 (ENSMFAG00000000088)	SLC13A5 (ENSMFAG00000043319)	XAF1 (ENSMFAG00000059411)
Crab-eating macaque	MODERN SPECIES	136																RABEP1 (ENSMFAG00000037357) ##22	NUP88 (ENSMFAG00000036967)
Strepsirrhini	ANCESTRAL SPECIES	21	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.g	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000162176	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00740000117028	ENSGT00390000012195
Bushbaby	MODERN SPECIES	161	MINK1 (ENSOGAG00000009664)	CHRNE (ENSOGAG00000009671)	C17orf107 (ENSOGAG00000009679)	ENSOGAG00000026251	SLC25A11 (ENSOGAG00000009681)	RNF167 (ENSOGAG00000034127)	ENSOGAG00000031395	ENO3 (ENSOGAG00000014726)	SPAG7 (ENSOGAG00000014731)	CAMTA2 (ENSOGAG00000014734)	INCA1 (ENSOGAG00000014745)	KIF1C (ENSOGAG00000014749)	SLC52A1 (ENSOGAG00000014756)	ZFP3 (ENSOGAG00000027676)	ZNF232 (ENSOGAG00000014767)	RABEP1 (ENSOGAG00000001605) ##22	NUP88 (ENSOGAG00000001608)	RPAIN (ENSOGAG00000027179)	C1QBP (ENSOGAG00000001610)	DHX33 (ENSOGAG00000001611)	DERL2 (ENSOGAG00000001613)	ENSOGAG00000014127	ENSOGAG00000024552	ENSOGAG00000030467
Lemuriformes	ANCESTRAL SPECIES	33	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00940000161335.a.a.s	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.g	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00900000141359	ENSGT00390000018151	ENSGT00390000001189.a	ENSGT00940000158281	ENSGT00940000160870	ENSGT01000000214434.E	ENSGT00390000005338	ENSGT00390000002877
Mouse lemur	MODERN SPECIES	7	MINK1 (ENSMICG00000012473)	C17orf107 (ENSMICG00000029139)	CHRNE (ENSMICG00000012492)	SLC25A11 (ENSMICG00000012506)	RNF167 (ENSMICG00000012515)	PFN1 (ENSMICG00000030835)	ENSMICG00000001774	SPAG7 (ENSMICG00000012527)	CAMTA2 (ENSMICG00000012537)	INCA1 (ENSMICG00000012561)	SLC52A1 (ENSMICG00000027341)	KIF1C (ENSMICG00000012566)	ZNF232 (ENSMICG00000008086)	ZNF594 (ENSMICG00000043837)	SCIMP (ENSMICG00000000241)	RABEP1 (ENSMICG00000012652) ##22	NUP88 (ENSMICG00000012678)	RPAIN (ENSMICG00000012694)	C1QBP (ENSMICG00000012706)	DHX33 (ENSMICG00000012715)	DERL2 (ENSMICG00000012735)	ENSMICG00000036683	SPATA22 (ENSMICG00000015662)	ASPA (ENSMICG00000015673)	TRPV3 (ENSMICG00000015684)	TRPV1 (ENSMICG00000015702)	SHPK (ENSMICG00000015722)	CTNS (ENSMICG00000015732)	TAX1BP3 (ENSMICG00000034377)	EMC6 (ENSMICG00000038091)	P2RX5 (ENSMICG00000015755)
Lemuriformes_a	ANCESTRAL SPECIES	132	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a.n	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00390000003774.b.f	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406.g	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046
Coquerels sifaka	MODERN SPECIES	794	CHRNE (ENSPCOG00000024668)	C17orf107 (ENSPCOG00000015564)	GP1BA (ENSPCOG00000025795)	SLC25A11 (ENSPCOG00000015071)	RNF167 (ENSPCOG00000005095)	PFN1 (ENSPCOG00000019901)	ENO3 (ENSPCOG00000017219)	SPAG7 (ENSPCOG00000018307)	CAMTA2 (ENSPCOG00000015636)	INCA1 (ENSPCOG00000022532)	KIF1C (ENSPCOG00000024122)	SLC52A1 (ENSPCOG00000023826)	ENSPCOG00000020503	ZNF232 (ENSPCOG00000014909)	SCIMP (ENSPCOG00000018419)	RABEP1 (ENSPCOG00000021001) ##22	NUP88 (ENSPCOG00000014919)	RPAIN (ENSPCOG00000003013)	ENSPCOG00000009047	DHX33 (ENSPCOG00000007524)	DERL2 (ENSPCOG00000022593)
Greater bamboo lemur	MODERN SPECIES	18			ENSPSMG00000019580	SLC25A11 (ENSPSMG00000019541)	RNF167 (ENSPSMG00000019499)	PFN1 (ENSPSMG00000019464)	ENO3 (ENSPSMG00000019151)	SPAG7 (ENSPSMG00000018967)	CAMTA2 (ENSPSMG00000018720)	INCA1 (ENSPSMG00000018542)	KIF1C (ENSPSMG00000018478)	SLC52A1 (ENSPSMG00000018414)	ZFP3 (ENSPSMG00000018404)	ZNF232 (ENSPSMG00000018395)	SCIMP (ENSPSMG00000018388)	ENSPSMG00000018378 ##22
Atlantogenata	ANCESTRAL SPECIES	37	ENSGT00940000162518	ENSGT00940000155114	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00400000024234	ENSGT00940000160933	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00940000163214	ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00390000009241	ENSGT00940000162176	ENSGT00940000158096
Xenarthra	ANCESTRAL SPECIES	443															ENSGT00390000007003	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00390000009241	ENSGT00940000162176	ENSGT00940000158096
Armadillo	MODERN SPECIES	4594											ENSDNOG00000044874	ENSDNOG00000008737	ENSDNOG00000031141	ENSDNOG00000030878	SCIMP (ENSDNOG00000035239)	RABEP1 (ENSDNOG00000008796) ##22	NUP88 (ENSDNOG00000008839)	RPAIN (ENSDNOG00000008870)	C1QBP (ENSDNOG00000008887)	DHX33 (ENSDNOG00000016865)	DERL2 (ENSDNOG00000047873)	MIS12 (ENSDNOG00000010190)	ENSDNOG00000032685	NLRP1 (ENSDNOG00000018344)	WSCD1 (ENSDNOG00000019657)
Sloth	MODERN SPECIES	1767																RABEP1 (ENSCHOG00000008665) ##22	NUP88 (ENSCHOG00000008678)	ENSCHOG00000008693	ENSCHOG00000008699	DHX33 (ENSCHOG00000008707)	DERL2 (ENSCHOG00000008723)
Afrotheria	ANCESTRAL SPECIES	27	ENSGT01030000234590.B.a.b	ENSGT00390000009313	ENSGT00940000162518	ENSGT00940000155114	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT00390000000359
Tenrec	MODERN SPECIES	2578																RABEP1 (ENSETEG00000015306) ##22
Afrotheria_a	ANCESTRAL SPECIES	27	ENSGT00940000155114	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00400000024234	ENSGT00940000163073	ENSGT00940000158465	ENSGT00940000159547.c	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00390000000242	ENSGT00940000159295	ENSGT00940000162652	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00520000059046	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT00390000000359
Hyrax	MODERN SPECIES	1612																RABEP1 (ENSPCAG00000005845) ##22	NUP88 (ENSPCAG00000005979)	RPAIN (ENSPCAG00000006089)	C1QBP (ENSPCAG00000006148)	DHX33 (ENSPCAG00000006190)	DERL2 (ENSPCAG00000006259)
Elephant	MODERN SPECIES	414	PSMB6 (ENSLAFG00000012859)	PLD2 (ENSLAFG00000022497)	MINK1 (ENSLAFG00000015294)	CHRNE (ENSLAFG00000015306)	GP1BA (ENSLAFG00000032715)	SLC25A11 (ENSLAFG00000015270)	RNF167 (ENSLAFG00000030250)	PFN1 (ENSLAFG00000021588)	ENO3 (ENSLAFG00000032462)	SPAG7 (ENSLAFG00000009273)	CAMTA2 (ENSLAFG00000012042)	INCA1 (ENSLAFG00000012048)	KIF1C (ENSLAFG00000030574)	ZFP3 (ENSLAFG00000002940)	ENSLAFG00000032713	RABEP1 (ENSLAFG00000011351) ##22	NUP88 (ENSLAFG00000023359)	RPAIN (ENSLAFG00000010161)	C1QBP (ENSLAFG00000023189)	DHX33 (ENSLAFG00000007136)	DERL2 (ENSLAFG00000006697)	MIS12 (ENSLAFG00000013060)	ENSLAFG00000031469	WSCD1 (ENSLAFG00000000920)	ENSLAFG00000026950	AIPL1 (ENSLAFG00000017944)	PIMREG (ENSLAFG00000017951)	PITPNM3 (ENSLAFG00000017953)	KIAA0753 (ENSLAFG00000013155)	TXNDC17 (ENSLAFG00000026769)	MED31 (ENSLAFG00000029776)
Marsupialia	ANCESTRAL SPECIES	41														ENSGT00940000154650.d.g.b.a.a.b.b.b.a.b	ENSGT00940000162921.m.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Opossum	MODERN SPECIES	6							ENSMODG00000024499	ENSMODG00000037619	ENSMODG00000024504	ENSMODG00000041283	ENSMODG00000039642	ENSMODG00000016696	ENSMODG00000004060	ENSMODG00000048925	ENSMODG00000028894	ENSMODG00000050889 ##22	ENSMODG00000040599	ENSMODG00000016652	C1QBP (ENSMODG00000024530)	DHX33 (ENSMODG00000016649)	DERL2 (ENSMODG00000016643)	MIS12 (ENSMODG00000016640)	WSCD1 (ENSMODG00000016639)	AIPL1 (ENSMODG00000016628)	ENSMODG00000041867	ENSMODG00000024533	ENSMODG00000016620	MFSD1 (ENSMODG00000011438)	ENSMODG00000011388	IQCJ (ENSMODG00000042671)	SCHIP1 (ENSMODG00000011375)
Marsupialia_b	ANCESTRAL SPECIES	7														ENSGT00940000154650.d.g.b.a.a.b.b.b.a.b	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.a.a.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Tasmanian devil	MODERN SPECIES	2												ENSSHAG00000023670	ENSSHAG00000002650	ENSSHAG00000031373	ENSSHAG00000001867	ENSSHAG00000000590 ##22	NUP88 (ENSSHAG00000001521)	ENSSHAG00000002158	C1QBP (ENSSHAG00000002441)	DHX33 (ENSSHAG00000002762)	DERL2 (ENSSHAG00000022140)	ENSSHAG00000028229	WSCD1 (ENSSHAG00000027091)	ENSSHAG00000028514	ENSSHAG00000001604	PITPNM3 (ENSSHAG00000001946)	ENSSHAG00000025467	MED31 (ENSSHAG00000025323)	SLC13A5 (ENSSHAG00000005323)	FBXO39 (ENSSHAG00000006087)	ENSSHAG00000006223
Diprotodontia	ANCESTRAL SPECIES	17														ENSGT00940000154650.d.g.b.a.a.b.b.b.a.b	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.a.a.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Wallaby	MODERN SPECIES	7511																RABEP1 (ENSMEUG00000013054) ##22	OR51Q1 (ENSMEUG00000013082)	NUP88 (ENSMEUG00000013092)
Diprotodontia_a	ANCESTRAL SPECIES	19														ENSGT00940000154650.d.g.b.a.a.b.b.b.a.b	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.a.a.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000158096	ENSGT00390000001289.b.b	ENSGT00390000008128	ENSGT00940000153849.b	ENSGT00390000009714	ENSGT00390000012195	ENSGT00390000015531	ENSGT01030000234550.a.a.c.a.b	ENSGT00530000063869.A
Common wonbat	MODERN SPECIES	436	SLC25A13 (ENSVURG00010000424)	DYNC1I1 (ENSVURG00010000355)	PDK4 (ENSVURG00010000317)	ASB4 (ENSVURG00010000290)	PON2 (ENSVURG00010000281)	PON3 (ENSVURG00010024804)	PON1 (ENSVURG00010024803)	PPP1R9A (ENSVURG00010024802)	ENSVURG00010024800	SGCE (ENSVURG00010024788)	CASD1 (ENSVURG00010024768)	COL1A2 (ENSVURG00010024752)	ENSVURG00010024746	ENSVURG00010024742	ENSVURG00010024738	RABEP1 (ENSVURG00010024732) ##22	NUP88 (ENSVURG00010024726)	ENSVURG00010024724	ENSVURG00010024718	DHX33 (ENSVURG00010024709)	DERL2 (ENSVURG00010024705)	MIS12 (ENSVURG00010024703)	WSCD1 (ENSVURG00010024684)	AIPL1 (ENSVURG00010024672)	ENSVURG00010024669	PITPNM3 (ENSVURG00010024644)	ENSVURG00010024634	TXNDC17 (ENSVURG00010024631)	MED31 (ENSVURG00010024628)	SLC13A5 (ENSVURG00010024622)	ENSVURG00010024617
koala	MODERN SPECIES	154														ENSPCIG00000020154	ENSPCIG00000036285	RABEP1 (ENSPCIG00000020150) ##22	NUP88 (ENSPCIG00000020147)	ENSPCIG00000020080	C1QBP (ENSPCIG00000020077)	DHX33 (ENSPCIG00000020074)	DERL2 (ENSPCIG00000020041)	ENSPCIG00000020038	WSCD1 (ENSPCIG00000020035)	AIPL1 (ENSPCIG00000008923)	ENSPCIG00000008920	PITPNM3 (ENSPCIG00000034268)	ENSPCIG00000020032	TXNDC17 (ENSPCIG00000020031)	MED31 (ENSPCIG00000020030)	ENSPCIG00000020029	ENSPCIG00000020028
Sauria	ANCESTRAL SPECIES	18	ENSGT00940000160521	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Archelosauria	ANCESTRAL SPECIES	18	ENSGT00940000160521	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00960000192456
Archosauria	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00960000192456
Aves	ANCESTRAL SPECIES	18	ENSGT00940000160521	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Neognathae	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Galloanserae	ANCESTRAL SPECIES	17	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Anatidae	ANCESTRAL SPECIES	27	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Pink-footed goose	MODERN SPECIES	38	ENSABRG00000001359	ENSABRG00000001302	LRWD1 (ENSABRG00000001249)	ALKBH4 (ENSABRG00000001235)	ORAI2 (ENSABRG00000001202)	PRKRIP1 (ENSABRG00000001187)	SH2B2 (ENSABRG00000001156) ##26	ENSABRG00000001146	ENSABRG00000001096	CUX1 (ENSABRG00000000863)	ENSABRG00000000810	ENSABRG00000010397	COL26A1 (ENSABRG00000010373)	IFT22 (ENSABRG00000010371)	ENSABRG00000010369	RABEP1 (ENSABRG00000010362) ##22	NUP88 (ENSABRG00000010352)	RPAIN (ENSABRG00000010339)	C1QBP (ENSABRG00000010331)	DHX33 (ENSABRG00000010321)	DERL2 (ENSABRG00000010316)	MIS12 (ENSABRG00000010312)	CAMKK1 (ENSABRG00000010295)	P2RX1 (ENSABRG00000010286)	ATP2A3 (ENSABRG00000010274)	ZZEF1 (ENSABRG00000009821)	ENSABRG00000009751	ANKFY1 (ENSABRG00000009345)	UBE2G1 (ENSABRG00000009258)	SPNS3 (ENSABRG00000009236) ##20	SPNS2 (ENSABRG00000009199) ##20
Duck	MODERN SPECIES	11	SRRM3 (ENSAPLG00000004545)	YWHAG (ENSAPLG00000004442)	ENSAPLG00000003804	ALKBH4 (ENSAPLG00000003499)	ORAI2 (ENSAPLG00000003488)	PRKRIP1 (ENSAPLG00000026029)	SH2B2 (ENSAPLG00000028018) ##26	LRWD1 (ENSAPLG00000003533)	ENSAPLG00000003744	ENSAPLG00000028994	CUX1 (ENSAPLG00000002588)	ENSAPLG00000001296	ENSAPLG00000000709	COL26A1 (ENSAPLG00000000582)	IFT22 (ENSAPLG00000020497)	RABEP1 (ENSAPLG00000016012) ##22	NUP88 (ENSAPLG00000015794)	RPAIN (ENSAPLG00000012721)	ENSAPLG00000015593	ENSAPLG00000019777	DERL2 (ENSAPLG00000003988)	ENSAPLG00000028279	ENSAPLG00000027818	P2RX1 (ENSAPLG00000004249)	ATP2A3 (ENSAPLG00000004337)	ENSAPLG00000028591	ZZEF1 (ENSAPLG00000006501)	CYB5D2 (ENSAPLG00000007714)	ANKFY1 (ENSAPLG00000007717)	ENSAPLG00000022341	UBE2G1 (ENSAPLG00000023425)
Phasianidae	ANCESTRAL SPECIES	17	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000159751	ENSGT00940000163742	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Japanese quail	MODERN SPECIES	10	DTX2 (ENSCJPG00005009802)	UPK3B (ENSCJPG00005009801)	ENSCJPG00005009800	ENSCJPG00005009799	ENSCJPG00005009798	LRWD1 (ENSCJPG00005009797)	ALKBH4 (ENSCJPG00005009796)	ORAI2 (ENSCJPG00005009795)	PRKRIP1 (ENSCJPG00005009793)	SH2B2 (ENSCJPG00005009791) ##26	CUX1 (ENSCJPG00005009330)	ENSCJPG00005009326	ENSCJPG00005009325	COL26A1 (ENSCJPG00005009324)	IFT22 (ENSCJPG00005009323)	RABEP1 (ENSCJPG00005009321) ##22	NUP88 (ENSCJPG00005009319)	RPAIN (ENSCJPG00005009316)	C1QBP (ENSCJPG00005009315)	DHX33 (ENSCJPG00005009314)	DERL2 (ENSCJPG00005009313)	MIS12 (ENSCJPG00005009312)	CAMKK1 (ENSCJPG00005009311)	P2RX1 (ENSCJPG00005009310)	ATP2A3 (ENSCJPG00005009291)	ZZEF1 (ENSCJPG00005008969)	ENSCJPG00005008968	ANKFY1 (ENSCJPG00005008910)	UBE2G1 (ENSCJPG00005008909)	SPNS3 (ENSCJPG00005008893) ##20	SPNS2 (ENSCJPG00005008892) ##20
Phasianidae_b	ANCESTRAL SPECIES	17	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000159751	ENSGT00940000163742	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Turkey	MODERN SPECIES	13	ENSMGAG00000016432 ##20	ENSMGAG00000002649 ##20	ENSMGAG00000002721	ENSMGAG00000022757	ENSMGAG00000002751	ENSMGAG00000002812	ENSMGAG00000018588	ENSMGAG00000002854	ENSMGAG00000002947	ENSMGAG00000017345	ENSMGAG00000002973	ENSMGAG00000003094	DHX33 (ENSMGAG00000003125)	RPAIN (ENSMGAG00000022455)	C1QBP (ENSMGAG00000019563)	ENSMGAG00000003011 ##22	ENSMGAG00000003183	ENSMGAG00000003281	ENSMGAG00000003342	ENSMGAG00000003308	ENSMGAG00000003398	ENSMGAG00000017818	ENSMGAG00000003469 ##26	PRKRIP1 (ENSMGAG00000019957)	ENSMGAG00000003488	ORAI2 (ENSMGAG00000017796)	ENSMGAG00000003534	LRWD1 (ENSMGAG00000003500)	ENSMGAG00000003623	ENSMGAG00000003617	ENSMGAG00000003606
Chicken	MODERN SPECIES	10	DTX2 (ENSGALG00010029192)	UPK3B (ENSGALG00010029157)	ENSGALG00010029156	RASA4B (ENSGALG00010029932)	ENSGALG00010029311	LRWD1 (ENSGALG00010029310)	ALKBH4 (ENSGALG00010029309)	ORAI3 (ENSGALG00010029304)	PRKRIP1 (ENSGALG00010029299)	SH2B2 (ENSGALG00010029297) ##26	CUX1 (ENSGALG00010029285)	MYL10 (ENSGALG00010029271)	ENSGALG00010029265	COL26A1 (ENSGALG00010029264)	IFT22 (ENSGALG00010029261)	RABEP1 (ENSGALG00010029256) ##22	NUP88 (ENSGALG00010029253)	RPAIN (ENSGALG00010029252)	C1QBP (ENSGALG00010029248)	DHX33 (ENSGALG00010029246)	DERL2 (ENSGALG00010029242)	MIS12 (ENSGALG00010029240)	CAMKK1 (ENSGALG00010029238)	P2RX1 (ENSGALG00010029580)	ATP2A3 (ENSGALG00010029576)	ZZEF1 (ENSGALG00010029166)	CYB5D2 (ENSGALG00010029164)	ANKFY1 (ENSGALG00010029163)	UBE2G1 (ENSGALG00010029429)	SPNS3 (ENSGALG00010029427) ##20	SPNS2 (ENSGALG00010029425) ##20
Neognathae_b	ANCESTRAL SPECIES	20	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Passeriformes	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Passeriformes_d	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Passeriformes_g	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Medium ground finch	MODERN SPECIES	233																RABEP1 (ENSGFOG00000005881) ##22	NUP88 (ENSGFOG00000004614)	RPAIN (ENSGFOG00000004522)	C1QBP (ENSGFOG00000004500)	DHX33 (ENSGFOG00000004481)	DERL2 (ENSGFOG00000004403)	MIS12 (ENSGFOG00000004386)	CAMKK1 (ENSGFOG00000004360)	P2RX1 (ENSGFOG00000004340)	ATP2A3 (ENSGFOG00000004021)	ZZEF1 (ENSGFOG00000003882)	CYB5D2 (ENSGFOG00000003854)	ANKFY1 (ENSGFOG00000003738)	UBE2G1 (ENSGFOG00000003708)	SPNS3 (ENSGFOG00000003622) ##20	SPNS2 (ENSGFOG00000003513) ##20
Passeroidea	ANCESTRAL SPECIES	20	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000170602	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Zebra finch	MODERN SPECIES	10	YWHAG (ENSTGUG00000004553)	SSC4D (ENSTGUG00000004547)	DTX2 (ENSTGUG00000004526)	UPK3B (ENSTGUG00000028345)	ENSTGUG00000022757	ENSTGUG00000004513	LRWD1 (ENSTGUG00000004484)	ALKBH4 (ENSTGUG00000004477)	ORAI2 (ENSTGUG00000021863)	ENSTGUG00000004439 ##26	CUX1 (ENSTGUG00000004386)	ENSTGUG00000004371	ENSTGUG00000027771	COL26A1 (ENSTGUG00000004358)	IFT22 (ENSTGUG00000004353)	RABEP1 (ENSTGUG00000004306) ##22	NUP88 (ENSTGUG00000004266)	RPAIN (ENSTGUG00000004259)	C1QBP (ENSTGUG00000004243)	DHX33 (ENSTGUG00000004226)	DERL2 (ENSTGUG00000004222)	MIS12 (ENSTGUG00000004221)	CAMKK1 (ENSTGUG00000004191)	P2RX1 (ENSTGUG00000004165)	ATP2A3 (ENSTGUG00000004042)	ZZEF1 (ENSTGUG00000004023)	CYB5D2 (ENSTGUG00000020351)	ANKFY1 (ENSTGUG00000003986)	UBE2G1 (ENSTGUG00000003974)	SPNS3 (ENSTGUG00000003953) ##20	SPNS2 (ENSTGUG00000003936) ##20
Common canary	MODERN SPECIES	28	DTX2 (ENSSCAG00000006060)	ENSSCAG00000006046	ENSSCAG00000006040	ENSSCAG00000006039	LRWD1 (ENSSCAG00000006035)	ALKBH4 (ENSSCAG00000006030)	ORAI2 (ENSSCAG00000006025)	PRKRIP1 (ENSSCAG00000006021)	SH2B2 (ENSSCAG00000006014) ##26	ENSSCAG00000006009	CUX1 (ENSSCAG00000006001)	ENSSCAG00000005990	ENSSCAG00000005987	ENSSCAG00000005982	IFT22 (ENSSCAG00000005979)	RABEP1 (ENSSCAG00000005969) ##22	NUP88 (ENSSCAG00000005922)	RPAIN (ENSSCAG00000005890)	C1QBP (ENSSCAG00000005881)	DHX33 (ENSSCAG00000005875)	DERL2 (ENSSCAG00000005870)	MIS12 (ENSSCAG00000005860)	CAMKK1 (ENSSCAG00000005852)	P2RX1 (ENSSCAG00000005839)	ATP2A3 (ENSSCAG00000005011)	ZZEF1 (ENSSCAG00000004742)	CYB5D2 (ENSSCAG00000004725)	ANKFY1 (ENSSCAG00000004713)	UBE2G1 (ENSSCAG00000004711)	SPNS3 (ENSSCAG00000004706) ##20	SPNS2 (ENSSCAG00000004698) ##20
Flycatcher	MODERN SPECIES	9	DTX2 (ENSFALG00000009561)	ENSFALG00000027894	ENSFALG00000009540	ENSFALG00000009533	ENSFALG00000009523	LRWD1 (ENSFALG00000009512)	ALKBH4 (ENSFALG00000028280)	ORAI2 (ENSFALG00000025629)	PRKRIP1 (ENSFALG00000026614)	SH2B2 (ENSFALG00000009471) ##26	CUX1 (ENSFALG00000009409)	ENSFALG00000009380	ENSFALG00000009375	COL26A1 (ENSFALG00000009371)	IFT22 (ENSFALG00000028680)	RABEP1 (ENSFALG00000009771) ##22	NUP88 (ENSFALG00000009775)	RPAIN (ENSFALG00000009778)	C1QBP (ENSFALG00000027641)	DHX33 (ENSFALG00000009785)	DERL2 (ENSFALG00000009789)	MIS12 (ENSFALG00000015134)	CAMKK1 (ENSFALG00000009802)	P2RX1 (ENSFALG00000009814)	ATP2A3 (ENSFALG00000009883)	ZZEF1 (ENSFALG00000007187)	CYB5D2 (ENSFALG00000023857)	ANKFY1 (ENSFALG00000007184)	UBE2G1 (ENSFALG00000007176)	SPNS3 (ENSFALG00000007170) ##20	SPNS2 (ENSFALG00000007165) ##20
Great tit	MODERN SPECIES	9	DTX2 (ENSPMJG00000018974)	UPK3B (ENSPMJG00000018973)	ENSPMJG00000018972	ENSPMJG00000018971	ENSPMJG00000018970	LRWD1 (ENSPMJG00000018969)	ALKBH4 (ENSPMJG00000018968)	ORAI2 (ENSPMJG00000018967)	PRKRIP1 (ENSPMJG00000018966)	SH2B2 (ENSPMJG00000018965) ##26	ENSPMJG00000018963	CUX1 (ENSPMJG00000018962)	ENSPMJG00000018958	COL26A1 (ENSPMJG00000018957)	IFT22 (ENSPMJG00000018955)	RABEP1 (ENSPMJG00000018954) ##22	NUP88 (ENSPMJG00000018953)	RPAIN (ENSPMJG00000018952)	C1QBP (ENSPMJG00000018951)	ENSPMJG00000018950	DHX33 (ENSPMJG00000018949)	DERL2 (ENSPMJG00000018948)	ENSPMJG00000018947	ENSPMJG00000018946	CAMKK1 (ENSPMJG00000018945)	P2RX1 (ENSPMJG00000018944)	ATP2A3 (ENSPMJG00000018943)	ZZEF1 (ENSPMJG00000018942)	CYB5D2 (ENSPMJG00000018941)	ANKFY1 (ENSPMJG00000018940)	UBE2G1 (ENSPMJG00000018939)
Neognathae_c	ANCESTRAL SPECIES	22	ENSGT01090000260061.c.a.c.a	ENSGT00950000183145.D	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a.e ##20	ENSGT00390000005976.a.a.b ##20
Golden eagle	MODERN SPECIES	1	DTX2 (ENSACCG00020004215)	UPK3B (ENSACCG00020004189)	ENSACCG00020004162	ENSACCG00020004143	ENSACCG00020004132	LRWD1 (ENSACCG00020004124)	ALKBH4 (ENSACCG00020004109)	ORAI2 (ENSACCG00020004101)	PRKRIP1 (ENSACCG00020004090)	SH2B2 (ENSACCG00020004080) ##26	ENSACCG00020004067	ENSACCG00020004054	ENSACCG00020004009	COL26A1 (ENSACCG00020010750)	IFT22 (ENSACCG00020010732)	RABEP1 (ENSACCG00020010708) ##22	NUP88 (ENSACCG00020010695)	RPAIN (ENSACCG00020010681)	C1QBP (ENSACCG00020010669)	DHX33 (ENSACCG00020010644)	DERL2 (ENSACCG00020010614)	MIS12 (ENSACCG00020010608)	CAMKK1 (ENSACCG00020010589)	P2RX1 (ENSACCG00020010580)	ATP2A3 (ENSACCG00020010495)	ZZEF1 (ENSACCG00020010320)	CYB5D2 (ENSACCG00020010294)	ANKFY1 (ENSACCG00020010275)	UBE2G1 (ENSACCG00020010258)	SPNS3 (ENSACCG00020010241) ##20	SPNS2 (ENSACCG00020010216) ##20
Kakapo	MODERN SPECIES	58	DTX2 (ENSSHBG00005012960)	UPK3B (ENSSHBG00005012933)	ENSSHBG00005012906	ENSSHBG00005012895	LRWD1 (ENSSHBG00005012877)	ALKBH4 (ENSSHBG00005012852)	ORAI2 (ENSSHBG00005012839)	PRKRIP1 (ENSSHBG00005012822)	SH2B2 (ENSSHBG00005012803) ##26	ENSSHBG00005012775	CUX1 (ENSSHBG00005012729)	ENSSHBG00005012710	ENSSHBG00005012468	COL26A1 (ENSSHBG00005012425)	IFT22 (ENSSHBG00005012410)	RABEP1 (ENSSHBG00005012376) ##22	NUP88 (ENSSHBG00005012348)	RPAIN (ENSSHBG00005012335)	C1QBP (ENSSHBG00005012324)	DHX33 (ENSSHBG00005012312)	DERL2 (ENSSHBG00005012301)	MIS12 (ENSSHBG00005012292)	CAMKK1 (ENSSHBG00005012253)	P2RX1 (ENSSHBG00005012205)	ATP2A3 (ENSSHBG00005012128)	ZZEF1 (ENSSHBG00005011972)	CYB5D2 (ENSSHBG00005011904)	ANKFY1 (ENSSHBG00005011864)	ENSSHBG00005011844	ENSSHBG00005011828	VPS37D (ENSSHBG00005011812)
African ostrich	MODERN SPECIES	734	YWHAG (ENSSCUG00000010970)	ENSSCUG00000010974	DTX2 (ENSSCUG00000010976)	ENSSCUG00000010979	ENSSCUG00000010981	LRWD1 (ENSSCUG00000010983)	ALKBH4 (ENSSCUG00000010984)	ORAI2 (ENSSCUG00000010987)	SH2B2 (ENSSCUG00000010990) ##26	ENSSCUG00000011002	ENSSCUG00000011009	ENSSCUG00000011011	ENSSCUG00000011012	COL26A1 (ENSSCUG00000011017)	ENSSCUG00000011020	RABEP1 (ENSSCUG00000011023) ##22	NUP88 (ENSSCUG00000011044)	RPAIN (ENSSCUG00000011074)	C1QBP (ENSSCUG00000011076)	DHX33 (ENSSCUG00000011078)	MIS12 (ENSSCUG00000011083)	CAMKK1 (ENSSCUG00000011085)	P2RX1 (ENSSCUG00000011089)	ATP2A3 (ENSSCUG00000011092)	ZZEF1 (ENSSCUG00000011105)	CYB5D2 (ENSSCUG00000011122)	ANKFY1 (ENSSCUG00000011124)	ENSSCUG00000011126	UBE2G1 (ENSSCUG00000011127)	SPNS3 (ENSSCUG00000011136) ##20	SPNS2 (ENSSCUG00000011141) ##20
Australian saltwater crocodile	MODERN SPECIES	50	SSC4D (ENSCPRG00005005887)	DTX2 (ENSCPRG00005005904)	UPK3B (ENSCPRG00005005925)	ENSCPRG00005005939	LRWD1 (ENSCPRG00005005951)	ENSCPRG00005005968	ALKBH4 (ENSCPRG00005005970)	ORAI2 (ENSCPRG00005005984)	PRKRIP1 (ENSCPRG00005005988)	SH2B2 (ENSCPRG00005005993) ##26	CUX1 (ENSCPRG00005006027)	ENSCPRG00005006075	ENSCPRG00005006103	ENSCPRG00005006214	IFT22 (ENSCPRG00005006226)	RABEP1 (ENSCPRG00005006234) ##22	NUP88 (ENSCPRG00005006247)	RPAIN (ENSCPRG00005006259)	C1QBP (ENSCPRG00005006264)	DHX33 (ENSCPRG00005006272)	DERL2 (ENSCPRG00005006282)	MIS12 (ENSCPRG00005006286)	CAMKK1 (ENSCPRG00005006293)	P2RX1 (ENSCPRG00005006297)	ATP2A3 (ENSCPRG00005006304)	ZZEF1 (ENSCPRG00005006338)	ENSCPRG00005006581	ANKFY1 (ENSCPRG00005006596)	UBE2G1 (ENSCPRG00005006906)	ENSCPRG00005006913	SPNS3 (ENSCPRG00005006920) ##20
Cryptodira	ANCESTRAL SPECIES	18	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a ##20
Testudinoidea	ANCESTRAL SPECIES	15	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751.d	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747.d	ENSGT00940000156747.c	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456
Testudinidae	ANCESTRAL SPECIES	19	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000159751.d	ENSGT00940000163742	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747.d	ENSGT00940000156747.c	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456
Goode s thornscrub tortoise	MODERN SPECIES	8	DTX2 (ENSGEVG00005012918)	UPK3B (ENSGEVG00005012890)	ENSGEVG00005012795	ENSGEVG00005011678	ENSGEVG00005011546	LRWD1 (ENSGEVG00005011499)	ALKBH4 (ENSGEVG00005011479)	ORAI2 (ENSGEVG00005011444)	PRKRIP1 (ENSGEVG00005011421)	SH2B2 (ENSGEVG00005011336) ##26	CUX1 (ENSGEVG00005007920)	ENSGEVG00005007477	ENSGEVG00005007377	COL26A1 (ENSGEVG00005007336)	IFT22 (ENSGEVG00005007318)	RABEP1 (ENSGEVG00005007150) ##22	NUP88 (ENSGEVG00005007074)	RPAIN (ENSGEVG00005007046)	C1QBP (ENSGEVG00005007036)	DHX33 (ENSGEVG00005006983)	MIS12 (ENSGEVG00005006957)	CAMKK1 (ENSGEVG00005006913)	P2RX1 (ENSGEVG00005006840)	ATP2A3 (ENSGEVG00005006749)	ZZEF1 (ENSGEVG00005006656)	CYB5D2 (ENSGEVG00005006607)	ANKFY1 (ENSGEVG00005006561)	UBE2G1 (ENSGEVG00005006533)	SPNS3 (ENSGEVG00005006089) ##20	SPNS2 (ENSGEVG00005005938) ##20	MYBBP1A (ENSGEVG00005005892)
Abingdon island giant tortoise	MODERN SPECIES	1196															IFT22 (ENSCABG00000011577)	RABEP1 (ENSCABG00000011296) ##22	NUP88 (ENSCABG00000011290)	RPAIN (ENSCABG00000011287)	C1QBP (ENSCABG00000011286)	ENSCABG00000011285	ENSCABG00000011283	DERL2 (ENSCABG00000011262)	MIS12 (ENSCABG00000011260)	CAMKK1 (ENSCABG00000011257)	P2RX1 (ENSCABG00000011243)	ATP2A3 (ENSCABG00000011237)	ZZEF1 (ENSCABG00000010918)	CYB5D2 (ENSCABG00000010913)	ANKFY1 (ENSCABG00000010754)	UBE2G1 (ENSCABG00000010751)	ENSCABG00000010750
Emydidae	ANCESTRAL SPECIES	16	ENSGT00940000157641	ENSGT00940000153392.b.b.b	ENSGT00940000153392.b.b.a	ENSGT00940000160149	ENSGT00940000164393	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751.d	ENSGT00940000167381	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747.d	ENSGT00940000156747.c	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20
Three-toed box turtle	MODERN SPECIES	106	UPK3B (ENSTMTG00000003172)	ENSTMTG00000003272	ENSTMTG00000003356	ENSTMTG00000003405	LRWD1 (ENSTMTG00000003422)	ALKBH4 (ENSTMTG00000003460)	ORAI2 (ENSTMTG00000003480)	PRKRIP1 (ENSTMTG00000003491)	SH2B2 (ENSTMTG00000003522) ##26	ENSTMTG00000003577	ENSTMTG00000003637	ENSTMTG00000003650	ENSTMTG00000003682	COL26A1 (ENSTMTG00000003704)	IFT22 (ENSTMTG00000003784)	RABEP1 (ENSTMTG00000003814) ##22	NUP88 (ENSTMTG00000003920)	RPAIN (ENSTMTG00000004291)	C1QBP (ENSTMTG00000004321)	DHX33 (ENSTMTG00000004335)	DERL2 (ENSTMTG00000004354)	MIS12 (ENSTMTG00000004372)	CAMKK1 (ENSTMTG00000004414)	P2RX1 (ENSTMTG00000004797)	ATP2A3 (ENSTMTG00000004912)	ENSTMTG00000004964	ZZEF1 (ENSTMTG00000005161)	CYB5D2 (ENSTMTG00000007176)	ANKFY1 (ENSTMTG00000007222)	UBE2G1 (ENSTMTG00000007578)	SPNS3 (ENSTMTG00000007607) ##20
painted turtle	MODERN SPECIES	15	UPK3B (ENSCPBG00000027778)	ENSCPBG00000027777	ENSCPBG00000027776	ENSCPBG00000027775	ENSCPBG00000027774	ALKBH4 (ENSCPBG00000027772)	LRWD1 (ENSCPBG00000027771)	ORAI2 (ENSCPBG00000027770)	PRKRIP1 (ENSCPBG00000027768)	SH2B2 (ENSCPBG00000027767) ##26	CUX1 (ENSCPBG00000027753)	ENSCPBG00000027750	ENSCPBG00000027749	COL26A1 (ENSCPBG00000027747)	IFT22 (ENSCPBG00000027746)	RABEP1 (ENSCPBG00000027745) ##22	NUP88 (ENSCPBG00000027744)	RPAIN (ENSCPBG00000027743)	C1QBP (ENSCPBG00000027742)	DHX33 (ENSCPBG00000027741)	MIS12 (ENSCPBG00000027739)	CAMKK1 (ENSCPBG00000027738)	P2RX1 (ENSCPBG00000027737)	ATP2A3 (ENSCPBG00000027736)	ZZEF1 (ENSCPBG00000027734)	CYB5D2 (ENSCPBG00000027728)	ANKFY1 (ENSCPBG00000027722)	UBE2G1 (ENSCPBG00000027717)	SPNS3 (ENSCPBG00000027711) ##20	SPNS2 (ENSCPBG00000027707) ##20	MYBBP1A (ENSCPBG00000027701)
Chinese turtle	MODERN SPECIES	2098																RABEP1 (ENSPSIG00000007279) ##22	NUP88 (ENSPSIG00000006546)	C1QBP (ENSPSIG00000006307)	RPAIN (ENSPSIG00000006302)	DHX33 (ENSPSIG00000006293)	ENSPSIG00000001482	ENSPSIG00000001473	CAMKK1 (ENSPSIG00000017856)	P2RX1 (ENSPSIG00000017607)	ATP2A3 (ENSPSIG00000016156)	ZZEF1 (ENSPSIG00000016080)	CYB5D2 (ENSPSIG00000016065)	ANKFY1 (ENSPSIG00000015710)	UBE2G1 (ENSPSIG00000015362)	SPNS3 (ENSPSIG00000015185) ##20	ENSPSIG00000001465
Lepidosauria	ANCESTRAL SPECIES	16				ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a ##20	ENSGT00390000005976.a.a.b ##20
Episquamata	ANCESTRAL SPECIES	13	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521	ENSGT01090000260061.c.a.c.a
Toxicofera	ANCESTRAL SPECIES	23	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521.l	ENSGT01090000260061.c.a.c.a
Elapidae	ANCESTRAL SPECIES	20	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747.e	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521.l	ENSGT01090000260061.c.a.c.a
Elapidae_a	DUPLICATION
Elapidae_a	ANCESTRAL SPECIES	20	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b.s ##22	ENSGT00530000063743.b.t ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747.e	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521.l
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00530000063743.b.s ##22
Eastern brown snake	MODERN SPECIES	40	ANKFY1 (ENSPTXG00000003295)	CYB5D2 (ENSPTXG00000003297)	ENSPTXG00000003299	ENSPTXG00000003303	ENSPTXG00000003304	LRWD1 (ENSPTXG00000003306)	ALKBH4 (ENSPTXG00000003309)	ORAI2 (ENSPTXG00000003331)	PRKRIP1 (ENSPTXG00000003333)	SH2B2 (ENSPTXG00000003335) ##26	CUX1 (ENSPTXG00000003349)	MYL10 (ENSPTXG00000003697)	COL26A1 (ENSPTXG00000003700)	ENSPTXG00000003704	IFT22 (ENSPTXG00000003705)	RABEP1 (ENSPTXG00000003706) ##22	NUP88 (ENSPTXG00000003709)	ENSPTXG00000003711	RPAIN (ENSPTXG00000003712)	MIS12 (ENSPTXG00000003713)	DERL2 (ENSPTXG00000003714)	DHX33 (ENSPTXG00000003715)	C1QBP (ENSPTXG00000003716)	CAMKK1 (ENSPTXG00000003717)	P2RX1 (ENSPTXG00000003718)	ATP2A3 (ENSPTXG00000003778)	ZZEF1 (ENSPTXG00000003783)	UPK3B (ENSPTXG00000003784)	DTX2 (ENSPTXG00000003786)	ENSPTXG00000003788	YWHAG (ENSPTXG00000003789)
Blue-lipped sea krait	MODERN SPECIES	10266																ENSLLTG00000014750 ##22
Elapidae_a	ANCESTRAL SPECIES	20	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b.s ##22	ENSGT00530000063743.b.t ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747.e	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521.l	ENSGT01090000260061.c.a.c.a
Acanthophiinae	ANCESTRAL SPECIES	11	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000163742	ENSGT00940000159751	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b.t ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747.e	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521.l	ENSGT01090000260061.c.a.c.a
Mainland tiger snake	MODERN SPECIES	44	CYB5D2 (ENSNSUG00000008037)	ENSNSUG00000008038	ENSNSUG00000008039	ENSNSUG00000008040	LRWD1 (ENSNSUG00000008041)	ALKBH4 (ENSNSUG00000008043)	ORAI2 (ENSNSUG00000008044)	PRKRIP1 (ENSNSUG00000008045)	SH2B2 (ENSNSUG00000008046) ##26	ENSNSUG00000008048	ENSNSUG00000008130	MYL10 (ENSNSUG00000008131)	COL26A1 (ENSNSUG00000008132)	ENSNSUG00000008133	IFT22 (ENSNSUG00000008134)	RABEP1 (ENSNSUG00000008135) ##22	NUP88 (ENSNSUG00000008137)	RPAIN (ENSNSUG00000008786)	MIS12 (ENSNSUG00000008787)	DERL2 (ENSNSUG00000008788)	ENSNSUG00000008789	ENSNSUG00000008790	C1QBP (ENSNSUG00000008791)	CAMKK1 (ENSNSUG00000008792)	P2RX1 (ENSNSUG00000008793)	ATP2A3 (ENSNSUG00000008845)	ZZEF1 (ENSNSUG00000008846)	ENSNSUG00000009219	UPK3B (ENSNSUG00000009220)	DTX2 (ENSNSUG00000009223)	ENSNSUG00000009224
Blue-lipped sea krait	MODERN SPECIES	1725																ENSLLTG00000018350 ##22	NUP88 (ENSLLTG00000018346)
Indian cobra	MODERN SPECIES		ANKFY1 (ENSNNAG00000006271)	CYB5D2 (ENSNNAG00000006452)	ENSNNAG00000006461	ENSNNAG00000006477	ENSNNAG00000006599	LRWD1 (ENSNNAG00000006623)	ALKBH4 (ENSNNAG00000006653)	ORAI2 (ENSNNAG00000006678)	PRKRIP1 (ENSNNAG00000006697)	SH2B2 (ENSNNAG00000006720) ##26	CUX1 (ENSNNAG00000006794)	MYL10 (ENSNNAG00000007082)	COL26A1 (ENSNNAG00000007107)	ENSNNAG00000007125	IFT22 (ENSNNAG00000007132)	RABEP1 (ENSNNAG00000007180) ##22	NUP88 (ENSNNAG00000008142)	RPAIN (ENSNNAG00000008684)	MIS12 (ENSNNAG00000008724)	DERL2 (ENSNNAG00000008736)	DHX33 (ENSNNAG00000008768)	C1QBP (ENSNNAG00000008867)	CAMKK1 (ENSNNAG00000008900)	P2RX1 (ENSNNAG00000009018)	ATP2A3 (ENSNNAG00000009196)	ZZEF1 (ENSNNAG00000011285)	ENSNNAG00000013484	DTX2 (ENSNNAG00000013501)	ENSNNAG00000013536	ENSNNAG00000013557	ENSNNAG00000013575
Lizard	MODERN SPECIES	1220									SH2B2 (ENSACAG00000036982) ##26	ENSACAG00000015088	ENSACAG00000038230	MYL10 (ENSACAG00000015270)	COL26A1 (ENSACAG00000015310)	ENSACAG00000015331	IFT22 (ENSACAG00000015335)	ENSACAG00000015349 ##22	ENSACAG00000015448
Laterata	ANCESTRAL SPECIES	18	ENSGT00940000160156	ENSGT00940000163794	ENSGT00940000160149	ENSGT00550000074975	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00390000015354.c.b.b	ENSGT00390000005003	ENSGT00950000183191.a.b ##26	ENSGT00940000159751	ENSGT00940000163742	ENSGT00940000161811	ENSGT00940000161716	ENSGT00390000017067	ENSGT00390000013187	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018665	ENSGT00530000063156.a.b	ENSGT00940000156747	ENSGT00390000018406	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000153392.b.b.a	ENSGT00940000153392.b.b.b	ENSGT00940000157641	ENSGT00940000160521	ENSGT01090000260061.c.a.c.a	ENSGT00940000155882.a.a
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000015943	ENSPMRG00000015961	LRWD1 (ENSPMRG00000015980)	ALKBH4 (ENSPMRG00000016008)	ORAI2 (ENSPMRG00000016009)	ENSPMRG00000016016	ENSPMRG00000016021	SH2B2 (ENSPMRG00000016025) ##26	CUX1 (ENSPMRG00000016049)	ENSPMRG00000016098	MYL10 (ENSPMRG00000016106)	COL26A1 (ENSPMRG00000016126)	ENSPMRG00000016164	PFN4 (ENSPMRG00000016168)	IFT22 (ENSPMRG00000016171)	RABEP1 (ENSPMRG00000016237) ##22	NUP88 (ENSPMRG00000016474)	ENSPMRG00000016830	MIS12 (ENSPMRG00000016833)	DERL2 (ENSPMRG00000016840)	DHX33 (ENSPMRG00000016862)	C1QBP (ENSPMRG00000016881)	CAMKK1 (ENSPMRG00000016892)	P2RX1 (ENSPMRG00000016916)	ATP2A3 (ENSPMRG00000017017)	ENSPMRG00000017620	ENSPMRG00000017629	UPK3B (ENSPMRG00000017647)	DTX2 (ENSPMRG00000017658)	ENSPMRG00000017665	ENSPMRG00000017670
Argentine black and white tegu	MODERN SPECIES	151									SH2B2 (ENSSMRG00000017909) ##26	ENSSMRG00000017907	ENSSMRG00000017906	ENSSMRG00000017901	ENSSMRG00000017898	COL26A1 (ENSSMRG00000017893)	IFT22 (ENSSMRG00000017891)	RABEP1 (ENSSMRG00000017890) ##22	NUP88 (ENSSMRG00000017576)	RPAIN (ENSSMRG00000017574)	MIS12 (ENSSMRG00000017573)	DERL2 (ENSSMRG00000017572)	DHX33 (ENSSMRG00000017569)	C1QBP (ENSSMRG00000017567)	CAMKK1 (ENSSMRG00000017565)	P2RX1 (ENSSMRG00000017564)	ATP2A3 (ENSSMRG00000017561)	PRKRIP1 (ENSSMRG00000017560)
tuatara	MODERN SPECIES	1832				ENSSPUG00000010824	ENSSPUG00000010802	LRWD1 (ENSSPUG00000010776)	ALKBH4 (ENSSPUG00000010769)	ORAI2 (ENSSPUG00000010756)	ENSSPUG00000010744	SH2B2 (ENSSPUG00000010724) ##26	ENSSPUG00000010706	ENSSPUG00000010681	ENSSPUG00000010657	COL26A1 (ENSSPUG00000010633)	IFT22 (ENSSPUG00000010619)	RABEP1 (ENSSPUG00000010564) ##22	NUP88 (ENSSPUG00000010536)	RPAIN (ENSSPUG00000010523)	C1QBP (ENSSPUG00000010511)	ENSSPUG00000010498	ENSSPUG00000010489	RAD51D (ENSSPUG00000010479)	RFFL (ENSSPUG00000010463)	LIG3 (ENSSPUG00000010440)
Anura	ANCESTRAL SPECIES	23	ENSGT00940000162944	ENSGT00390000006307	ENSGT00940000160705.B	ENSGT00940000153251.a	ENSGT00390000004910	ENSGT01010000229200	ENSGT00390000009030	ENSGT00940000155420.b	ENSGT00390000001360	ENSGT00550000074797.b	ENSGT00390000003004	ENSGT00940000160802	ENSGT00890000139406.a	ENSGT00940000156066	ENSGT00940000162258.b	ENSGT00530000063743.b ##22	ENSGT00390000015063	ENSGT00390000006416	ENSGT00390000018406	ENSGT00940000156747	ENSGT00530000063156.a.b	ENSGT00390000018665	ENSGT00940000154890.a	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.b ##20	ENSGT00390000017457
Leishan spiny toad	MODERN SPECIES	5	UBE2G1 (ENSLLEG00000010904)	ANKFY1 (ENSLLEG00000011012)	CYB5D2 (ENSLLEG00000011247)	ZZEF1 (ENSLLEG00000011346)	ENSLLEG00000011931	ENSLLEG00000011961	ENSLLEG00000012029	NF1 (ENSLLEG00000012125)	ENSLLEG00000014778	OMG (ENSLLEG00000014837)	WSB1 (ENSLLEG00000014940)	ENSLLEG00000015278	KSR1 (ENSLLEG00000015326)	ENSLLEG00000015521	ENSLLEG00000015702	RABEP1 (ENSLLEG00000015791) ##22	NUP88 (ENSLLEG00000016768)	RPAIN (ENSLLEG00000016984)	C1QBP (ENSLLEG00000017081)	DHX33 (ENSLLEG00000017154)	DERL2 (ENSLLEG00000017248)	MIS12 (ENSLLEG00000017399)	CAMKK1 (ENSLLEG00000017468)	P2RX1 (ENSLLEG00000017814)	ATP2A3 (ENSLLEG00000018160)	ENSLLEG00000020281	ENSLLEG00000020305	ENSLLEG00000020336	ENSLLEG00000020367	SPNS2 (ENSLLEG00000020408) ##20	ENSLLEG00000020670
Frog	MODERN SPECIES	2	sh2d1b (ENSXETG00000045754)	ENSXETG00000044930	ENSXETG00000035280	mrps23 (ENSXETG00000016140)	msi2 (ENSXETG00000035039)	ENSXETG00000036468	akap1 (ENSXETG00000037247)	ENSXETG00000040823	nf1 (ENSXETG00000021350)	omg (ENSXETG00000026240)	wsb1 (ENSXETG00000021353)	ksr1 (ENSXETG00000035110)	ENSXETG00000049179	ENSXETG00000035216	lgals9c (ENSXETG00000030764)	rabep1 (ENSXETG00000021356) ##22	nup88 (ENSXETG00000021359)	rpain (ENSXETG00000026234)	c1qbp (ENSXETG00000021363)	rpp21 (ENSXETG00000026230)	zbtb11 (ENSXETG00000021364)	trmt10c (ENSXETG00000029921)	ENSXETG00000021365	txnl4b (ENSXETG00000021367)	XB6001422 [provisional] (ENSXETG00000033027)	senp7 (ENSXETG00000032106)	impg2 (ENSXETG00000013361)	abi3bp (ENSXETG00000041510)	tfg (ENSXETG00000013350)	gemin8 (ENSXETG00000013349)	ENSXETG00000043314
Coelacanth	MODERN SPECIES	250	EIF4H (ENSLACG00000018610)	RFC2 (ENSLACG00000018591)	ENSLACG00000018590	RFFL (ENSLACG00000018577)	ENSLACG00000018564	MDH2 (ENSLACG00000018556)	styxl1 (ENSLACG00000018546)	TMEM120A (ENSLACG00000018534)	POR (ENSLACG00000018511)	ENSLACG00000022404	ENSLACG00000018492	ENSLACG00000018479	MMP28 (ENSLACG00000018443)	P2RX1 (ENSLACG00000018417)	CAMKK1 (ENSLACG00000018356)	RABEP1 (ENSLACG00000018254) ##22	NUP88 (ENSLACG00000018231)	RPAIN (ENSLACG00000018226)	C1QBP (ENSLACG00000018219)	MIS12 (ENSLACG00000018211)	IFT22 (ENSLACG00000018212)	DERL2 (ENSLACG00000018200)	DHX33 (ENSLACG00000018174)	ENSLACG00000018066	ENSLACG00000018060	ENSLACG00000018018	CUX1 (ENSLACG00000017710)	SH2B2 (ENSLACG00000017508) ##26	PRKRIP1 (ENSLACG00000017486)	ENSLACG00000017371	NCF1 (ENSLACG00000017263)
Elephant shark	MODERN SPECIES	1878																rabep1 (ENSCMIG00000011482) ##22	aurkb (ENSCMIG00000011464)	nup88 (ENSCMIG00000011443)	RPAIN (ENSCMIG00000011425)	c1qbp (ENSCMIG00000011422)	dhx33 (ENSCMIG00000011385)	ENSCMIG00000011381	CAMKK1 (ENSCMIG00000011378)
Ciona	DUPLICATION
Ciona	ANCESTRAL SPECIES																	ENSGT00530000063743.c #22
Ciona savignyi	MODERN SPECIES	129	ENSCSAVG00000004683	ENSCSAVG00000004647	ENSCSAVG00000004646	ENSCSAVG00000004642	ENSCSAVG00000004573	ENSCSAVG00000004570	ENSCSAVG00000004564	ENSCSAVG00000004524	ENSCSAVG00000004505	ENSCSAVG00000004502	ENSCSAVG00000004492	ENSCSAVG00000004488	ENSCSAVG00000004476	ENSCSAVG00000004472	ENSCSAVG00000004463	ENSCSAVG00000004456 #22	ENSCSAVG00000004449	ENSCSAVG00000004437	ENSCSAVG00000004428	ENSCSAVG00000004422	ENSCSAVG00000004414	ENSCSAVG00000004396	ENSCSAVG00000004388	ENSCSAVG00000004266	ENSCSAVG00000004234	ENSCSAVG00000004226	ENSCSAVG00000004213	ENSCSAVG00000004090	ENSCSAVG00000004077	ENSCSAVG00000003532	ENSCSAVG00000003527
Ciona intestinalis	MODERN SPECIES	2	rps13 (ENSCING00000018058)	ENSCING00000019720	ENSCING00000020964	ENSCING00000020063	ENSCING00000022810	ENSCING00000022560	ENSCING00000024304	ENSCING00000020281	ENSCING00000022717	ENSCING00000022901	ENSCING00000018297	ENSCING00000020475	ENSCING00000024875	ENSCING00000018655	ENSCING00000002753	ENSCING00000025054 #22	ENSCING00000018166 #22	ENSCING00000021659	ENSCING00000020986	ENSCING00000019736	ENSCING00000021526	ENSCING00000022627	ENSCING00000017945	ENSCING00000020921	ENSCING00000020016	ENSCING00000023027	ENSCING00000020685	ENSCING00000020492	ENSCING00000018049	ENSCING00000021097	ENSCING00000020728
Ciona	ANCESTRAL SPECIES																	ENSGT00530000063743.d #22
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000019720	ENSCING00000020964	ENSCING00000020063	ENSCING00000022810	ENSCING00000022560	ENSCING00000024304	ENSCING00000020281	ENSCING00000022717	ENSCING00000022901	ENSCING00000018297	ENSCING00000020475	ENSCING00000024875	ENSCING00000018655	ENSCING00000002753	ENSCING00000025054 #22	ENSCING00000018166 #22	ENSCING00000021659	ENSCING00000020986	ENSCING00000019736	ENSCING00000021526	ENSCING00000022627	ENSCING00000017945	ENSCING00000020921	ENSCING00000020016	ENSCING00000023027	ENSCING00000020685	ENSCING00000020492	ENSCING00000018049	ENSCING00000021097	ENSCING00000020728	ENSCING00000024368
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00530000063743 #22
Caenorhabditis elegans	MODERN SPECIES	2	him-10 (WBGene00001869)	R12B2.3 (WBGene00020019)	R12B2.2 (WBGene00020018)	R12B2.7 (WBGene00020021)	sma-4 (WBGene00004858)	R12B2.8 (WBGene00044411)	mdt-15 (WBGene00007016)	R12B2.13 (WBGene00303073)	R12B2.6 (WBGene00020020)	W04D12.1 (WBGene00021029)	ddx-23 (WBGene00017162)	cct-6 (WBGene00000381)	alh-9 (WBGene00000115)	dpf-4 (WBGene00001057)	dnpp-1 (WBGene00017163)	rabn-5 (WBGene00017161) #22	eng-1 (WBGene00017164)	F01F1.15 (WBGene00017169)	F01F1.11 (WBGene00017165)	F01F1.3 (WBGene00017160)	aldo-2 (WBGene00017166)	mig-21 (WBGene00003252)	F01F1.2 (WBGene00017159)	hpo-10 (WBGene00017158)	F01F1.14 (WBGene00017168)	C28H8.5 (WBGene00016196)	C28H8.7 (WBGene00016198)	C28H8.8 (WBGene00016199)	pxl-1 (WBGene00016197)	dpff-1 (WBGene00016200)	erd-2.2 (WBGene00016195)