Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00990000210767	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692 #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000162980	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055	ENSGT00940000163664 #25	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.b.b #37	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a ##37	ENSGT00940000162502	ENSGT00940000163246
Suina	ANCESTRAL SPECIES	7	ENSGT00940000161236.a.a	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692 #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00940000153097.B.a.b #24	ENSGT00940000163664 #25	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.b.b #37	ENSGT00950000182925.D.a.b.a.a.a.a ##37	ENSGT00940000163246	ENSGT00940000162988	ENSGT00940000166157	ENSGT00950000182925.D.a.b.a.b ##37
Pig	MODERN SPECIES	300	SMC1A (ENSSSCG00000012325) #7	RIBC1 (ENSSSCG00000012326) #8	HSD17B10 (ENSSSCG00000012327) #9	HUWE1 (ENSSSCG00000012328) #10	ENSSSCG00000047701 #11	PHF8 (ENSSSCG00000012329) #12	FAM120C (ENSSSCG00000035822) #13	WNK3 (ENSSSCG00000012332) #14	TSR2 (ENSSSCG00000012334) #15	FGD1 (ENSSSCG00000012335) #16	GNL3L (ENSSSCG00000012336) #17	ENSSSCG00000038019 #18	TRO (ENSSSCG00000039027) #19	PFKFB1 (ENSSSCG00000024814) #20	ENSSSCG00000041777 #21	APEX2 (ENSSSCG00000012348) #22	ALAS2 (ENSSSCG00000012347) #23	PAGE2B (ENSSSCG00000012346) #24	USP51 (ENSSSCG00000012349) #25	MAGEH1 (ENSSSCG00000012350) #26	FOXR2 (ENSSSCG00000020805) #27	ENSSSCG00000059274 #28	RRAGB (ENSSSCG00000037228) #29	KLF8 (ENSSSCG00000012352) #30	UBQLN2 (ENSSSCG00000035264) #31	ENSSSCG00000041254 #32	ENSSSCG00000043490 #33	NBDY (ENSSSCG00000053779) #34	ENSSSCG00000042147 #35	ENSSSCG00000012354 #36	SPIN3 (ENSSSCG00000055308) #37
Chacoan peccary	MODERN SPECIES	796					PHF8 (ENSCWAG00000004040) #12	FAM120C (ENSCWAG00000003876) #13	WNK3 (ENSCWAG00000003738) #14	TSR2 (ENSCWAG00000018566) #15	FGD1 (ENSCWAG00000018471) #16	ENSCWAG00000018460	GNL3L (ENSCWAG00000018441) #17	ENSCWAG00000018418	MAGED2 (ENSCWAG00000018357)	ENSCWAG00000018133 #19	PFKFB1 (ENSCWAG00000017886) #20	APEX2 (ENSCWAG00000017787) #22	ALAS2 (ENSCWAG00000017659) #23	USP51 (ENSCWAG00000017642) #25	MAGEH1 (ENSCWAG00000017629) #26	FOXR2 (ENSCWAG00000017607) #27	RRAGB (ENSCWAG00000017548) #29	KLF8 (ENSCWAG00000017467) #30	UBQLN2 (ENSCWAG00000017442) #31	NBDY (ENSCWAG00000017431) #34
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00990000210767	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692 #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000162980	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055	ENSGT00940000163664 #25	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.b.b #37	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a ##37	ENSGT00940000162988	ENSGT00940000163246
Artiodactyla_b	ANCESTRAL SPECIES	24	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692 #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000162980	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a ##37	ENSGT00940000162988	ENSGT00940000163246	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a
Cetacea	ANCESTRAL SPECIES	21	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000001432	ENSGT00940000158517	ENSGT00940000154172.ab.a.b.b	ENSGT00950000182925.D.a.b.b #37	ENSGT00390000004891 #34	ENSGT00940000162603 #31	ENSGT00940000161062 #30	ENSGT00950000183031.B.e.a #29	ENSGT00940000162993 #27	ENSGT00840000130063 #26	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877 #17	ENSGT00940000159438 #16	ENSGT00390000012692 #15	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #13	ENSGT00940000157847 #12	ENSGT00940000156319 #10	ENSGT00940000155170 #9	ENSGT00390000010825.a #8	ENSGT00940000155614 #7	ENSGT00940000159667	ENSGT00940000161236.a.a
Odontoceti	ANCESTRAL SPECIES	22	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000001432	ENSGT00940000158517	ENSGT00940000154172.ab.a.b.b	ENSGT00950000182925.D.a.b.b #37	ENSGT00390000004891 #34	ENSGT00940000162603 #31	ENSGT00940000161062 #30	ENSGT00950000183031.B.e.a #29	ENSGT00940000162993 #27	ENSGT00840000130063 #26	ENSGT00940000153097.B.a.b #24	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877 #17	ENSGT00940000159438 #16	ENSGT00390000012692 #15	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #13	ENSGT00940000157847 #12	ENSGT00940000156319 #10	ENSGT00940000155170 #9	ENSGT00390000010825.a #8	ENSGT00940000155614 #7	ENSGT00940000159667	ENSGT00940000161236.a.a
Odontoceti_a	ANCESTRAL SPECIES	20	ENSGT01050000244986.b.b.b.b.d.a	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000001432	ENSGT00940000158517	ENSGT00950000182925.D.a.b.b #37	ENSGT00390000004891 #34	ENSGT00940000162603 #31	ENSGT00940000161062 #30	ENSGT00950000183031.B.e.a #29	ENSGT00840000130063 #26	ENSGT00940000153097.B.a.b #24	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055.e	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877 #17	ENSGT00940000159438 #16	ENSGT00390000012692 #15	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #13	ENSGT00940000157847 #12	ENSGT00940000156319 #10	ENSGT00940000155170 #9	ENSGT00390000010825.a #8	ENSGT00940000155614 #7	ENSGT00940000159667
Odontoceti_b	ANCESTRAL SPECIES	22	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000001432	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000158517	ENSGT00950000182925.D.a.b.b #37	ENSGT00390000004891 #34	ENSGT00940000162603 #31	ENSGT00940000161062 #30	ENSGT00950000183031.B.e.a #29	ENSGT00840000130063 #26	ENSGT00940000153097.B.a.b #24	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055.e	ENSGT00940000161795	ENSGT00940000155877 #17	ENSGT00940000159438 #16	ENSGT00390000012692 #15	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #13	ENSGT00940000157847 #12	ENSGT00940000156319 #10	ENSGT00940000155170 #9	ENSGT00390000010825.a #8	ENSGT00940000155614 #7	ENSGT00940000159667	ENSGT00940000161236.a.a
Monodontidae	ANCESTRAL SPECIES	25	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000001432	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000158517	ENSGT00950000182925.D.a.b.b #37	ENSGT00390000004891 #34	ENSGT00940000162603 #31	ENSGT00940000161062 #30	ENSGT00950000183031.B.e.a #29	ENSGT00840000130063 #26	ENSGT00940000153097.B.a.b #24	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055.e	ENSGT00940000161795	ENSGT00940000155877 #17	ENSGT00940000159438 #16	ENSGT00390000012692 #15	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #13	ENSGT00940000157847 #12	ENSGT00940000156319 #10	ENSGT00940000155170 #9	ENSGT00390000010825.a #8	ENSGT00940000155614 #7	ENSGT00940000159667	ENSGT00940000161236.a.a
Beluga whale	MODERN SPECIES	90		ENSDLEG00000008155	ENSDLEG00000008172	ENSDLEG00000008183 ##37	ENSDLEG00000008217 ##37	ENSDLEG00000008249 ##37	ENSDLEG00000008275	SPIN3 (ENSDLEG00000008291) #37	NBDY (ENSDLEG00000008326) #34	UBQLN2 (ENSDLEG00000008355) #31	KLF8 (ENSDLEG00000008387) #30	RRAGB (ENSDLEG00000008420) #29	MAGEH1 (ENSDLEG00000008506) #26	PFKFB1 (ENSDLEG00000008567) #20	ENSDLEG00000008775 #19	APEX2 (ENSDLEG00000008787) #22	ALAS2 (ENSDLEG00000008810) #23	FAM104B (ENSDLEG00000008890)	MAGED2 (ENSDLEG00000008921)	ENSDLEG00000008997	GNL3L (ENSDLEG00000009043) #17	FGD1 (ENSDLEG00000009089) #16	TSR2 (ENSDLEG00000009140) #15	WNK3 (ENSDLEG00000009160) #14	FAM120C (ENSDLEG00000009239) #13	PHF8 (ENSDLEG00000009342) #12
Narwhal	MODERN SPECIES	309	ZC4H2 (ENSMMNG00015016824)	ZC3H12B (ENSMMNG00015016788)	LAS1L (ENSMMNG00015016763)	MSN (ENSMMNG00015016724)	VSIG4 (ENSMMNG00015016697)	ENSMMNG00015016678	HEPH (ENSMMNG00015016499)	NBDY (ENSMMNG00015016427) #34	UBQLN2 (ENSMMNG00015016410) #31	KLF8 (ENSMMNG00015016332) #30	RRAGB (ENSMMNG00015016249) #29	MAGEH1 (ENSMMNG00015016219) #26	ENSMMNG00015016171 #24	ENSMMNG00015016046 #19	PFKFB1 (ENSMMNG00015015867) #20	APEX2 (ENSMMNG00015015760) #22	ALAS2 (ENSMMNG00015015724) #23	ENSMMNG00015015694	MAGED2 (ENSMMNG00015015643)	ENSMMNG00015015611	GNL3L (ENSMMNG00015015584) #17	FGD1 (ENSMMNG00015015565) #16	TSR2 (ENSMMNG00015015553) #15	WNK3 (ENSMMNG00015015519) #14	FAM120C (ENSMMNG00015015477) #13	PHF8 (ENSMMNG00015015410) #12	HUWE1 (ENSMMNG00015015224) #10	HSD17B10 (ENSMMNG00015015147) #9	ENSMMNG00015015125 #8	SMC1A (ENSMMNG00015015063) #7	IQSEC2 (ENSMMNG00015014978)
Vaquita	MODERN SPECIES	34	ENSPSNG00000019256	ENSPSNG00000019242	ENSPSNG00000019211 ##37	ENSPSNG00000019180 ##37	ENSPSNG00000019165 ##37	ENSPSNG00000019149	SPIN3 (ENSPSNG00000019132) #37	NBDY (ENSPSNG00000019116) #34	UBQLN2 (ENSPSNG00000019091) #31	KLF8 (ENSPSNG00000018935) #30	RRAGB (ENSPSNG00000018869) #29	MAGEH1 (ENSPSNG00000018848) #26	ENSPSNG00000018739 #24	ENSPSNG00000018500 #19	PFKFB1 (ENSPSNG00000018204) #20	APEX2 (ENSPSNG00000018132) #22	ALAS2 (ENSPSNG00000017951) #23	FAM104B (ENSPSNG00000017830)	MAGED2 (ENSPSNG00000017729)	GNL3L (ENSPSNG00000017656) #17	FGD1 (ENSPSNG00000017466) #16	TSR2 (ENSPSNG00000017417) #15	WNK3 (ENSPSNG00000017347) #14	FAM120C (ENSPSNG00000017250) #13	PHF8 (ENSPSNG00000016986) #12	HUWE1 (ENSPSNG00000016681) #10	HSD17B10 (ENSPSNG00000016498) #9	ENSPSNG00000016407 #8	SMC1A (ENSPSNG00000016208) #7	IQSEC2 (ENSPSNG00000015666)	KDM5C (ENSPSNG00000015193)
Dolphin	MODERN SPECIES	1301														ENSTTRG00000004622 #19	PFKFB1 (ENSTTRG00000004679) #20	APEX2 (ENSTTRG00000004703) #22	ALAS2 (ENSTTRG00000004714) #23
Sperm whale	MODERN SPECIES	13	ENSPCTG00005004885	SPIN3 (ENSPCTG00005004862) #37	ENSPCTG00005004848	ENSPCTG00005004833 ##37	ENSPCTG00005004809 ##37	ENSPCTG00005004800	NBDY (ENSPCTG00005004789) #34	UBQLN2 (ENSPCTG00005004778) #31	KLF8 (ENSPCTG00005004731) #30	RRAGB (ENSPCTG00005004573) #29	FOXR2 (ENSPCTG00005019282) #27	MAGEH1 (ENSPCTG00005019268) #26	ENSPCTG00005019180 #24	ENSPCTG00005018864 #19	PFKFB1 (ENSPCTG00005018527) #20	APEX2 (ENSPCTG00005018476) #22	ALAS2 (ENSPCTG00005018232) #23	ENSPCTG00005018177	MAGED2 (ENSPCTG00005018055)	GNL3L (ENSPCTG00005017973) #17	FGD1 (ENSPCTG00005017873) #16	TSR2 (ENSPCTG00005017826) #15	WNK3 (ENSPCTG00005017191) #14	FAM120C (ENSPCTG00005017082) #13	PHF8 (ENSPCTG00005016772) #12	HUWE1 (ENSPCTG00005014928) #10	HSD17B10 (ENSPCTG00005014605) #9	RIBC1 (ENSPCTG00005014327) #8	SMC1A (ENSPCTG00005013647) #7	IQSEC2 (ENSPCTG00005012439)	KDM5C (ENSPCTG00005011065)
Blue whale	MODERN SPECIES	40	ENSBMSG00010019410	ENSBMSG00010019396	ENSBMSG00010019380 ##37	ENSBMSG00010019367 ##37	ENSBMSG00010019353	SPIN3 (ENSBMSG00010019338) #37	ENSBMSG00010019331	NBDY (ENSBMSG00010019319) #34	UBQLN2 (ENSBMSG00010019310) #31	KLF8 (ENSBMSG00010019225) #30	RRAGB (ENSBMSG00010019141) #29	FOXR2 (ENSBMSG00010019118) #27	MAGEH1 (ENSBMSG00010019102) #26	ENSBMSG00010018946 #19	PFKFB1 (ENSBMSG00010018787) #20	APEX2 (ENSBMSG00010018751) #22	ALAS2 (ENSBMSG00010018686) #23	ENSBMSG00010018665	MAGED2 (ENSBMSG00010018562)	GNL3L (ENSBMSG00010018498) #17	FGD1 (ENSBMSG00010018441) #16	TSR2 (ENSBMSG00010018401) #15	WNK3 (ENSBMSG00010018201) #14	FAM120C (ENSBMSG00010018003) #13	PHF8 (ENSBMSG00010017843) #12	HUWE1 (ENSBMSG00010017744) #10	HSD17B10 (ENSBMSG00010017684) #9	RIBC1 (ENSBMSG00010017610) #8	SMC1A (ENSBMSG00010017566) #7	IQSEC2 (ENSBMSG00010017388)	KDM5C (ENSBMSG00010017114)
Pecora	ANCESTRAL SPECIES	27	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.b.b #37	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000014785	ENSGT00940000159316	ENSGT00390000018389	ENSGT00940000153664.A.b.a
Yarkand deer	MODERN SPECIES	1323	ENSCHYG00000016502	HUWE1 (ENSCHYG00000016142) #10	ENSCHYG00000016027	ENSCHYG00000015970	PHF8 (ENSCHYG00000015566) #12	ENSCHYG00000015498	ENSCHYG00000015432	FAM120C (ENSCHYG00000015064) #13	WNK3 (ENSCHYG00000014818) #14	ENSCHYG00000014706 #15	FGD1 (ENSCHYG00000014503) #16	GNL3L (ENSCHYG00000014302) #17	MAGED2 (ENSCHYG00000014061)	ENSCHYG00000014013	PFKFB1 (ENSCHYG00000013428) #20	APEX2 (ENSCHYG00000013314) #22	ALAS2 (ENSCHYG00000013150) #23	ENSCHYG00000013116	ZNF81 (ENSCHYG00000013067)	ZNF182 (ENSCHYG00000013010)	ENSCHYG00000012978	ENSCHYG00000012946	SLC38A5 (ENSCHYG00000012767)	ENSCHYG00000012549	PORCN (ENSCHYG00000012176)	EBP (ENSCHYG00000012133)	TBC1D25 (ENSCHYG00000012073)	RBM3 (ENSCHYG00000011980)	WDR13 (ENSCHYG00000011832)	WAS (ENSCHYG00000011572)	SUV39H1 (ENSCHYG00000011530)
Percora_a	ANCESTRAL SPECIES	22	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a.e ##37	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000014785	ENSGT00940000159316
Siberian musk deer	MODERN SPECIES	90	IQSEC2 (ENSMMSG00000005270)	SMC1A (ENSMMSG00000005622) #7	RIBC1 (ENSMMSG00000005693) #8	HSD17B10 (ENSMMSG00000005843) #9	HUWE1 (ENSMMSG00000005955) #10	ENSMMSG00000006513	PHF8 (ENSMMSG00000006574) #12	ENSMMSG00000006866	ENSMMSG00000006940 #13	ENSMMSG00000007398 #15	FGD1 (ENSMMSG00000007433) #16	GNL3L (ENSMMSG00000007509) #17	MAGED2 (ENSMMSG00000007590)	ENSMMSG00000007676 #19	PFKFB1 (ENSMMSG00000007731) #20	APEX2 (ENSMMSG00000007815) #22	ALAS2 (ENSMMSG00000007838) #23	ENSMMSG00000007905	MAGEH1 (ENSMMSG00000007925) #26	FOXR2 (ENSMMSG00000007940) #27	RRAGB (ENSMMSG00000007959) #29	KLF8 (ENSMMSG00000008026) #30	UBQLN2 (ENSMMSG00000008075) #31	NBDY (ENSMMSG00000008086) #34	SPIN3 (ENSMMSG00000008104) #37	ENSMMSG00000008143 ##37	ENSMMSG00000008156 ##37	HEPH (ENSMMSG00000008172)	VSIG4 (ENSMMSG00000008330)	MSN (ENSMMSG00000008391)	ENSMMSG00000008430
Bovidae	ANCESTRAL SPECIES	23	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a.e ##37	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000014785	ENSGT00940000159316
Bovinae	ANCESTRAL SPECIES	32	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a.e ##37	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a	ENSGT00390000014785	ENSGT00940000159316
Bos	ANCESTRAL SPECIES	30	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT01090000260200	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a.e ##37	ENSGT00950000182925.D.a.b.a.a.a.a.f ##37	ENSGT00940000165111.b	ENSGT00940000158517	ENSGT00390000001432
Wild yak	MODERN SPECIES	655																APEX2 (ENSBMUG00000026249) #22	ALAS2 (ENSBMUG00000026246) #23
Domestic yak	MODERN SPECIES	69	HUWE1 (ENSBGRG00000026013) #10	ENSBGRG00000026042	PHF8 (ENSBGRG00000026049) #12	ENSBGRG00000026075 #13	ENSBGRG00000026084 #13	WNK3 (ENSBGRG00000026090) #14	ENSBGRG00000026097 #15	FGD1 (ENSBGRG00000026106) #16	ENSBGRG00000026149	GNL3L (ENSBGRG00000026157) #17	ENSBGRG00000026166	MAGED2 (ENSBGRG00000026168)	ENSBGRG00000026172 #19	PFKFB1 (ENSBGRG00000007193) #20	ENSBGRG00000007503	APEX2 (ENSBGRG00000007525) #22	ALAS2 (ENSBGRG00000007653) #23	ENSBGRG00000007858	ENSBGRG00000007909	MAGEH1 (ENSBGRG00000007940) #26	FOXR2 (ENSBGRG00000007965) #27	RRAGB (ENSBGRG00000008042) #29	ENSBGRG00000008268	KLF8 (ENSBGRG00000008297) #30	UBQLN2 (ENSBGRG00000008416) #31	NBDY (ENSBGRG00000008427) #34	ENSBGRG00000008442	ENSBGRG00000008462	ENSBGRG00000008488 ##37	ENSBGRG00000008507 ##37	ENSBGRG00000008521 ##37
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000156786.l	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.a.b.b ##37	ENSGT00950000182925.D.a.b.a.a.a.b ##37	ENSGT00950000182925.D.a.b.a.a.a.a.e ##37	ENSGT00950000182925.D.a.b.a.a.a.a.f ##37	ENSGT00940000165111.b	ENSGT00940000158517	ENSGT00390000001432	ENSGT01090000260082.d.a.a.a.a
Cow	MODERN SPECIES	177	RIBC1 (ENSBTAG00000017769) #8	HSD17B10 (ENSBTAG00000017779) #9	HUWE1 (ENSBTAG00000006122) #10	ENSBTAG00000005098	PHF8 (ENSBTAG00000013289) #12	FAM120C (ENSBTAG00000003855) #13	WNK3 (ENSBTAG00000023182) #14	TSR2 (ENSBTAG00000015858) #15	FGD1 (ENSBTAG00000015860) #16	RAB21 (ENSBTAG00000019370)	GNL3L (ENSBTAG00000031564) #17	ENSBTAG00000049441	MAGED2 (ENSBTAG00000039888)	TRO (ENSBTAG00000051604) #19	PFKFB1 (ENSBTAG00000000172) #20	APEX2 (ENSBTAG00000013177) #22	ALAS2 (ENSBTAG00000013178) #23	MAGEH1 (ENSBTAG00000039090) #26	FOXR2 (ENSBTAG00000046659) #27	RRAGB (ENSBTAG00000012980) #29	KLF8 (ENSBTAG00000005852) #30	UBQLN2 (ENSBTAG00000021843) #31	NBDY (ENSBTAG00000054746) #34	ENSBTAG00000049019	ENSBTAG00000053877 ##37	SPIN2 (ENSBTAG00000013260) ##37	SPIN2B (ENSBTAG00000046769) ##37	SPIN2B (ENSBTAG00000038387) ##37	ENSBTAG00000045616	HEPH (ENSBTAG00000047416)	VSIG4 (ENSBTAG00000015769)
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005013304	PHF8 (ENSBIXG00005013537) #12	FAM120C (ENSBIXG00005013694) #13	ENSBIXG00005013719	WNK3 (ENSBIXG00005013750) #14	ENSBIXG00005001713 #15	FGD1 (ENSBIXG00005013811) #16	ENSBIXG00005013829	GNL3L (ENSBIXG00005001728) #17	ENSBIXG00005007315	MAGED2 (ENSBIXG00005014025)	ENSBIXG00005014063	ENSBIXG00005001826	ENSBIXG00005014077	PFKFB1 (ENSBIXG00005014145) #20	APEX2 (ENSBIXG00005014199) #22	ALAS2 (ENSBIXG00005014264) #23	MAGEH1 (ENSBIXG00005001884) #26	FOXR2 (ENSBIXG00005014322) #27	RRAGB (ENSBIXG00005014371) #29	KLF8 (ENSBIXG00005014469) #30	UBQLN2 (ENSBIXG00005014517) #31	NBDY (ENSBIXG00005014528) #34	ENSBIXG00005014533 ##37	ENSBIXG00005002025 ##37	ENSBIXG00005014560 ##37	ENSBIXG00005014564 ##37	ENSBIXG00005002029	ENSBIXG00005014584 ##28	HEPH (ENSBIXG00005014859)	ENSBIXG00005014906 ##28
American bison	MODERN SPECIES	2535																APEX2 (ENSBBBG00000016207) #22
Caprinae	ANCESTRAL SPECIES	40	ENSGT00940000159667	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000153299.c.b.a.b	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692.i #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00940000167970.a.b
Goat	MODERN SPECIES	29	ENSCHIG00000026014	ENSCHIG00000017570	ENSCHIG00000022374	NDP (ENSCHIG00000013603)	ENSCHIG00000025084	EFHC2 (ENSCHIG00000005059)	FUNDC1 (ENSCHIG00000019943)	ENSCHIG00000011225	DIPK2B (ENSCHIG00000014928)	KDM6A (ENSCHIG00000026240)	ENSCHIG00000015092	ENSCHIG00000011583	ENSCHIG00000021372	ENSCHIG00000015519 #19	PFKFB1 (ENSCHIG00000023388) #20	APEX2 (ENSCHIG00000019916) #22	ALAS2 (ENSCHIG00000011854) #23	RRAGB (ENSCHIG00000018786) #29	KLF8 (ENSCHIG00000011453) #30	ENSCHIG00000009409	NBDY (ENSCHIG00000012160) #34	ENSCHIG00000011936	ENSCHIG00000007597 ##37	WNK3 (ENSCHIG00000001939) #14	FAM120C (ENSCHIG00000014638) #13	ENSCHIG00000019840	HUWE1 (ENSCHIG00000020699) #10	HSD17B10 (ENSCHIG00000017468) #9	RIBC1 (ENSCHIG00000014380) #8	ENSCHIG00000025979 #7	SMC1A (ENSCHIG00000008648) #7
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020009018	HUWE1 (ENSOARG00020006767) #10	ENSOARG00020006494	ENSOARG00020006481	ENSOARG00020006463	ENSOARG00020006441	PHF8 (ENSOARG00020024344) #12	ENSOARG00020024314	WNK3 (ENSOARG00020024240) #13	WNK3 (ENSOARG00020024139) #14	TSR2 (ENSOARG00020024077) #15	FGD1 (ENSOARG00020024044) #16	ENSOARG00020024031 #17	MAGED2 (ENSOARG00020023984)	PFKFB1 (ENSOARG00020023816) #20	APEX2 (ENSOARG00020023778) #22	ALAS2 (ENSOARG00020023746) #23	MAGEH1 (ENSOARG00020023703) #26	FOXR2 (ENSOARG00020023670) #27	RRAGB (ENSOARG00020023609) #29	KLF8 (ENSOARG00020023543) #30	UBQLN2 (ENSOARG00020023528) #31	ENSOARG00020023517	NBDY (ENSOARG00020023507) #34	ENSOARG00020023498	ENSOARG00020023480	ENSOARG00020023465 ##37	ENSOARG00020023450 ##37	ENSOARG00020023439 ##37	HEPH (ENSOARG00020023252)	VSIG4 (ENSOARG00020023216)
Camelidae	ANCESTRAL SPECIES	45	ENSGT00940000159667	ENSGT00990000210767	ENSGT00940000155614 #7	ENSGT00390000010825.a #8	ENSGT00940000155170 #9	ENSGT00940000156319 #10	ENSGT00940000157847 #12	ENSGT00530000063168.a.a.b #13	ENSGT00940000160145.b #14	ENSGT00390000012692 #15	ENSGT00940000159438 #16	ENSGT00940000155877 #17	ENSGT00940000161795	ENSGT00940000162763 #19	ENSGT00950000182835.c.c #20	ENSGT00530000063540.a #22	ENSGT00940000159912 #23	ENSGT00390000001055	ENSGT00940000163664 #25	ENSGT00840000130063 #26	ENSGT00940000162993 #27	ENSGT00950000183031.B.e.a #29	ENSGT00940000161062 #30	ENSGT00940000162603 #31	ENSGT00390000004891 #34	ENSGT00950000182925.D.a.b.b #37	ENSGT00950000182925.D.a.b.a.a.a.a ##37	ENSGT00940000162502	ENSGT00940000163246	ENSGT00940000162988
Arabian camel	MODERN SPECIES	204	RIBC1 (ENSCDRG00005020442) #8	HSD17B10 (ENSCDRG00005020487) #9	HUWE1 (ENSCDRG00005020527) #10	ENSCDRG00005020654	PHF8 (ENSCDRG00005020670) #12	FAM120C (ENSCDRG00005008991) #13	WNK3 (ENSCDRG00005009083) #14	TSR2 (ENSCDRG00005009269) #15	FGD1 (ENSCDRG00005009349) #16	GNL3L (ENSCDRG00005009469) #17	ENSCDRG00005009639	ENSCDRG00005009671	MAGED2 (ENSCDRG00005009732)	ENSCDRG00005010042 #19	PFKFB1 (ENSCDRG00005010443) #20	APEX2 (ENSCDRG00005010743) #22	ALAS2 (ENSCDRG00005010822) #23	FAM104B (ENSCDRG00005011003)	ENSCDRG00005011062	USP51 (ENSCDRG00005011079) #25	MAGEH1 (ENSCDRG00005011093) #26	FOXR2 (ENSCDRG00005011115) #27	RRAGB (ENSCDRG00005011140) #29	KLF8 (ENSCDRG00005011290) #30	UBQLN2 (ENSCDRG00005011422) #31	NBDY (ENSCDRG00005011513) #34	SPIN3 (ENSCDRG00005011527) #37	ENSCDRG00005011568 ##37	ENSCDRG00005011599 ##37	FAAH2 (ENSCDRG00005011750)	ENSCDRG00005011809