Glires	ANCESTRAL SPECIES	12	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Myomorpha	ANCESTRAL SPECIES	7	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Lesser Egyptian jerboa	MODERN SPECIES	122	Adssl1 (ENSJJAG00000012984) #7	Inf2 (ENSJJAG00000023781) #8	Tmem179 (ENSJJAG00000021084) #9	A530016L24Rik (ENSJJAG00000020219) #10	Kif26a (ENSJJAG00000000781) #11	Aspg (ENSJJAG00000022213) #12	Tdrd9 (ENSJJAG00000022462) #13	ENSJJAG00000020211 #14	ENSJJAG00000018703 #15	Zfyve21 (ENSJJAG00000016650) #16	Xrcc3 (ENSJJAG00000013625) #17	Klc1 (ENSJJAG00000014112) #18	ENSJJAG00000003577 #19	Bag5 (ENSJJAG00000000717) #20	Trmt61a (ENSJJAG00000000428) #21	Ckb (ENSJJAG00000022169) #22	Mark3 (ENSJJAG00000022266) #23	Eif5 (ENSJJAG00000011403) #24	Otub2 (ENSJJAG00000018693) #25	Ddx24 (ENSJJAG00000010842) #26	Ppp4r4 (ENSJJAG00000021389) #27	Serpina10 (ENSJJAG00000015823) #28	Serpina6 (ENSJJAG00000014466) #29	ENSJJAG00000014013 #30	ENSJJAG00000024304 #31	Serpina11 (ENSJJAG00000010522) #32	Serpina12 (ENSJJAG00000009472) #33	Serpina5 (ENSJJAG00000020864) #34	ENSJJAG00000017595 #35	Gsc (ENSJJAG00000014492) #36	Dicer1 (ENSJJAG00000010766) #37
Muroidea	ANCESTRAL SPECIES	16	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Cricetidae	ANCESTRAL SPECIES	17	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Cricetinae	ANCESTRAL SPECIES	11	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Golden Hamster	MODERN SPECIES	630	Inf2 (ENSMAUG00000009995) #8	Tmem179 (ENSMAUG00000001149) #9	A530016L24Rik (ENSMAUG00000009851) #10	Kif26a (ENSMAUG00000020776) #11	Aspg (ENSMAUG00000015535) #12	Tdrd9 (ENSMAUG00000020617) #13	Rd3l (ENSMAUG00000013408)	ENSMAUG00000012836 #14	Ppp1r13b (ENSMAUG00000001128) #15	ENSMAUG00000021878 #16	Xrcc3 (ENSMAUG00000021117) #17	ENSMAUG00000004564 #18	Coa8 (ENSMAUG00000019799) #19	Bag5 (ENSMAUG00000012615) #20	Trmt61a (ENSMAUG00000007728) #21	Ckb (ENSMAUG00000012909) #22	Mark3 (ENSMAUG00000009057) #23	Eif5 (ENSMAUG00000001058) #24	Tnfaip2 (ENSMAUG00000012833)	Exoc3l4 (ENSMAUG00000022110)	Lbhd2 (ENSMAUG00000020246)	Cdc42bpb (ENSMAUG00000022059)	Traf3 (ENSMAUG00000021686)	Ankrd9 (ENSMAUG00000019567)	Tecpr2 (ENSMAUG00000011919)	ENSMAUG00000000734	Zfp839 (ENSMAUG00000001267)	Mok (ENSMAUG00000015386)	ENSMAUG00000020978	1700001K19Rik (ENSMAUG00000019531)	Dync1h1 (ENSMAUG00000022224)
Chinese hamster chok1gshd	MODERN SPECIES	266	Inf2 (ENSCGRG00001003961) #8	Tmem179 (ENSCGRG00001018078) #9	A530016L24Rik (ENSCGRG00001020089) #10	Kif26a (ENSCGRG00001017284) #11	Aspg (ENSCGRG00001020993) #12	Tdrd9 (ENSCGRG00001023336) #13	Rd3l (ENSCGRG00001000482)	Atp5mpl (ENSCGRG00001000674) #14	Ppp1r13b (ENSCGRG00001004903) #15	Zfyve21 (ENSCGRG00001009837) #16	Xrcc3 (ENSCGRG00001011253) #17	Klc1 (ENSCGRG00001013287) #18	Coa8 (ENSCGRG00001020208) #19	Bag5 (ENSCGRG00001014270) #20	Trmt61a (ENSCGRG00001020952) #21	Ckb (ENSCGRG00001021206) #22	Mark3 (ENSCGRG00001017890) #23	ENSCGRG00001023334 #24	Gm266 (ENSCGRG00001014678)	Tnfaip2 (ENSCGRG00001008498)	Exoc3l4 (ENSCGRG00001011425)	Lbhd2 (ENSCGRG00001012003)	Cdc42bpb (ENSCGRG00001017235)	Amn (ENSCGRG00001010221)	Traf3 (ENSCGRG00001012901)	Rcor1 (ENSCGRG00001020214)	Ankrd9 (ENSCGRG00001021240)	Tecpr2 (ENSCGRG00001022916)	Cinp (ENSCGRG00001004209)	ENSCGRG00001010768	Mok (ENSCGRG00001012968)
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Northern American deer mouse	MODERN SPECIES	5	Inf2 (ENSPEMG00000000569) #8	Tmem179 (ENSPEMG00000012685) #9	A530016L24Rik (ENSPEMG00000001566) #10	Kif26a (ENSPEMG00000007760) #11	Aspg (ENSPEMG00000009783) #12	Rd3l (ENSPEMG00000017732)	Tdrd9 (ENSPEMG00000012496) #13	ENSPEMG00000024643 #14	Ppp1r13b (ENSPEMG00000014348) #15	Zfyve21 (ENSPEMG00000023106) #16	Xrcc3 (ENSPEMG00000012323) #17	Klc1 (ENSPEMG00000015453) #18	Coa8 (ENSPEMG00000013261) #19	Bag5 (ENSPEMG00000030905) #20	Trmt61a (ENSPEMG00000023413) #21	Ckb (ENSPEMG00000017185) #22	Mark3 (ENSPEMG00000010472) #23	Eif5 (ENSPEMG00000015312) #24	Gm266 (ENSPEMG00000029489)	Tnfaip2 (ENSPEMG00000000511)	Exoc3l4 (ENSPEMG00000006944)	Lbhd2 (ENSPEMG00000024190)	Cdc42bpb (ENSPEMG00000023339)	Amn (ENSPEMG00000006540)	Traf3 (ENSPEMG00000022996)	Rcor1 (ENSPEMG00000028079)	Ankrd9 (ENSPEMG00000024255)	Tecpr2 (ENSPEMG00000021467)	Cinp (ENSPEMG00000022134)	Zfp839 (ENSPEMG00000024097)	Mok (ENSPEMG00000022583)
Prairie vole	MODERN SPECIES		Inf2 (ENSMOCG00000015901) #8	Tmem179 (ENSMOCG00000019593) #9	A530016L24Rik (ENSMOCG00000005085) #10	Kif26a (ENSMOCG00000001640) #11	Aspg (ENSMOCG00000011052) #12	ENSMOCG00000006567	Tdrd9 (ENSMOCG00000017012) #13	Atp5mpl (ENSMOCG00000018303) #14	Ppp1r13b (ENSMOCG00000017048) #15	Zfyve21 (ENSMOCG00000013746) #16	Xrcc3 (ENSMOCG00000008144) #17	Klc1 (ENSMOCG00000016748) #18	Coa8 (ENSMOCG00000018572) #19	Bag5 (ENSMOCG00000015176) #20	Trmt61a (ENSMOCG00000014726) #21	Ckb (ENSMOCG00000014242) #22	Mark3 (ENSMOCG00000018347) #23	ENSMOCG00000021790 #24	Tnfaip2 (ENSMOCG00000011420)	Exoc3l4 (ENSMOCG00000004296)	Lbhd2 (ENSMOCG00000018196)	Cdc42bpb (ENSMOCG00000021696)	ENSMOCG00000017882	Amn (ENSMOCG00000001893)	Traf3 (ENSMOCG00000017772)	Rcor1 (ENSMOCG00000012999)	Ankrd9 (ENSMOCG00000002881)	Tecpr2 (ENSMOCG00000000369)	Cinp (ENSMOCG00000019159)	Mok (ENSMOCG00000016493)	ENSMOCG00000018133
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00860000135782	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784
Mus	ANCESTRAL SPECIES	10	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00900000143791	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00860000135782	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784
Mus_A	ANCESTRAL SPECIES	17	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00900000143791	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00860000135782	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784
Mus_B	ANCESTRAL SPECIES	17	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00900000143791	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00860000135782	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784
Mus_C	ANCESTRAL SPECIES	11	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00900000143791	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT00900000143542	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00860000135782	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784
spretus	MODERN SPECIES	3	Tmem179 (MGP_SPRETEiJ_G0019000) #9	A530016L24Rik (MGP_SPRETEiJ_G0018999) #10	MGP_SPRETEiJ_G0018998	Kif26a (MGP_SPRETEiJ_G0018997) #11	Aspg (MGP_SPRETEiJ_G0018996) #12	Rd3l (MGP_SPRETEiJ_G0018995)	Tdrd9 (MGP_SPRETEiJ_G0018994) #13	Atp5mpl (MGP_SPRETEiJ_G0018993) #14	Ppp1r13b (MGP_SPRETEiJ_G0018992) #15	Zfyve21 (MGP_SPRETEiJ_G0018991) #16	Xrcc3 (MGP_SPRETEiJ_G0018990) #17	Klc1 (MGP_SPRETEiJ_G0018989) #18	Coa8 (MGP_SPRETEiJ_G0018988) #19	Bag5 (MGP_SPRETEiJ_G0018987) #20	Trmt61a (MGP_SPRETEiJ_G0018986) #21	Ckb (MGP_SPRETEiJ_G0018985) #22	Mark3 (MGP_SPRETEiJ_G0018984) #23	Eif5 (MGP_SPRETEiJ_G0018983) #24	Gm266 (MGP_SPRETEiJ_G0018982)	Tnfaip2 (MGP_SPRETEiJ_G0018981)	Exoc3l4 (MGP_SPRETEiJ_G0018980)	Lbhd2 (MGP_SPRETEiJ_G0018979)	Cdc42bpb (MGP_SPRETEiJ_G0018978)	Amn (MGP_SPRETEiJ_G0018977)	Traf3 (MGP_SPRETEiJ_G0018976)	MGP_SPRETEiJ_G0018975	Rcor1 (MGP_SPRETEiJ_G0018974)	Ankrd9 (MGP_SPRETEiJ_G0018973)	Tecpr2 (MGP_SPRETEiJ_G0018972)	Cinp (MGP_SPRETEiJ_G0018971)	Zfp839 (MGP_SPRETEiJ_G0018970)
Steppe mouse	MODERN SPECIES	3176													ENSMSIG00000010681 #19	Bag5 (ENSMSIG00000010672) #20	Trmt61a (ENSMSIG00000010648) #21	Ckb (ENSMSIG00000010628) #22	Mark3 (ENSMSIG00000009190) #23	ENSMSIG00000009125	Eif5 (ENSMSIG00000008970) #24	Gm266 (ENSMSIG00000008953)	Tnfaip2 (ENSMSIG00000008909)	ENSMSIG00000008902	Exoc3l4 (ENSMSIG00000008877)	Lbhd2 (ENSMSIG00000008862)	ENSMSIG00000008843	Cdc42bpb (ENSMSIG00000008716)	Amn (ENSMSIG00000008673)	Traf3 (ENSMSIG00000008575)	ENSMSIG00000008566	ENSMSIG00000008556	Ankrd9 (ENSMSIG00000008520)
Mouse	MODERN SPECIES	3	Inf2 (ENSMUSG00000037679) #8	Tmem179 (ENSMUSG00000054013) #9	A530016L24Rik (ENSMUSG00000043122) #10	Kif26a (ENSMUSG00000021294) #11	Aspg (ENSMUSG00000037686) #12	Rd3l (ENSMUSG00000091402)	Tdrd9 (ENSMUSG00000054003) #13	Atp5mpl (ENSMUSG00000021290) #14	Ppp1r13b (ENSMUSG00000021285) #15	Zfyve21 (ENSMUSG00000021286) #16	Xrcc3 (ENSMUSG00000021287) #17	Klc1 (ENSMUSG00000021288) #18	Coa8 (ENSMUSG00000037787) #19	Bag5 (ENSMUSG00000049792) #20	Trmt61a (ENSMUSG00000060950) #21	Ckb (ENSMUSG00000001270) #22	Mark3 (ENSMUSG00000007411) #23	Eif5 (ENSMUSG00000021282) #24	ENSMUSG00000121570	Gm266 (ENSMUSG00000010529)	Tnfaip2 (ENSMUSG00000021281)	Exoc3l4 (ENSMUSG00000021280)	Lbhd2 (ENSMUSG00000087075)	Cdc42bpb (ENSMUSG00000021279)	Amn (ENSMUSG00000021278)	Traf3 (ENSMUSG00000021277)	Rcor1 (ENSMUSG00000037896)	Ankrd9 (ENSMUSG00000037904)	Tecpr2 (ENSMUSG00000021275)	Cinp (ENSMUSG00000021276)	Zfp839 (ENSMUSG00000021271)
Ryukyu mouse	MODERN SPECIES	3	Tmem179 (MGP_CAROLIEiJ_G0018151) #9	A530016L24Rik (MGP_CAROLIEiJ_G0018150) #10	MGP_CAROLIEiJ_G0018149	Kif26a (MGP_CAROLIEiJ_G0018148) #11	Aspg (MGP_CAROLIEiJ_G0018147) #12	Rd3l (MGP_CAROLIEiJ_G0018146)	Tdrd9 (MGP_CAROLIEiJ_G0018145) #13	Atp5mpl (MGP_CAROLIEiJ_G0018144) #14	Ppp1r13b (MGP_CAROLIEiJ_G0018143) #15	Zfyve21 (MGP_CAROLIEiJ_G0018142) #16	Xrcc3 (MGP_CAROLIEiJ_G0018141) #17	Klc1 (MGP_CAROLIEiJ_G0018140) #18	MGP_CAROLIEiJ_G0018139 #19	Bag5 (MGP_CAROLIEiJ_G0018138) #20	Trmt61a (MGP_CAROLIEiJ_G0018137) #21	Ckb (MGP_CAROLIEiJ_G0018136) #22	Mark3 (MGP_CAROLIEiJ_G0018135) #23	MGP_CAROLIEiJ_G0018134 #24	Gm266 (MGP_CAROLIEiJ_G0018133)	Tnfaip2 (MGP_CAROLIEiJ_G0018132)	Exoc3l4 (MGP_CAROLIEiJ_G0018131)	Lbhd2 (MGP_CAROLIEiJ_G0018130)	Cdc42bpb (MGP_CAROLIEiJ_G0018129)	Amn (MGP_CAROLIEiJ_G0018128)	Traf3 (MGP_CAROLIEiJ_G0018127)	MGP_CAROLIEiJ_G0018126	Rcor1 (MGP_CAROLIEiJ_G0018125)	Ankrd9 (MGP_CAROLIEiJ_G0018124)	Tecpr2 (MGP_CAROLIEiJ_G0018123)	MGP_CAROLIEiJ_G0018122	Zfp839 (MGP_CAROLIEiJ_G0018121)
Shrew mouse	MODERN SPECIES	20	Tmem179 (MGP_PahariEiJ_G0029908) #9	A530016L24Rik (MGP_PahariEiJ_G0029907) #10	MGP_PahariEiJ_G0029906	Kif26a (MGP_PahariEiJ_G0029905) #11	Aspg (MGP_PahariEiJ_G0029904) #12	Rd3l (MGP_PahariEiJ_G0029903)	Tdrd9 (MGP_PahariEiJ_G0029902) #13	Atp5mpl (MGP_PahariEiJ_G0029901) #14	Ppp1r13b (MGP_PahariEiJ_G0029900) #15	Zfyve21 (MGP_PahariEiJ_G0029899) #16	Xrcc3 (MGP_PahariEiJ_G0029898) #17	Klc1 (MGP_PahariEiJ_G0029897) #18	Coa8 (MGP_PahariEiJ_G0029896) #19	Bag5 (MGP_PahariEiJ_G0029895) #20	Trmt61a (MGP_PahariEiJ_G0029894) #21	Ckb (MGP_PahariEiJ_G0029893) #22	Mark3 (MGP_PahariEiJ_G0029892) #23	Eif5 (MGP_PahariEiJ_G0029891) #24	Gm266 (MGP_PahariEiJ_G0029890)	Tnfaip2 (MGP_PahariEiJ_G0029889)	Exoc3l4 (MGP_PahariEiJ_G0029888)	Lbhd2 (MGP_PahariEiJ_G0029887)	Cdc42bpb (MGP_PahariEiJ_G0029886)	Amn (MGP_PahariEiJ_G0029885)	Traf3 (MGP_PahariEiJ_G0029884)	MGP_PahariEiJ_G0029883	Rcor1 (MGP_PahariEiJ_G0029882)	Ankrd9 (MGP_PahariEiJ_G0029881)	Tecpr2 (MGP_PahariEiJ_G0029880)	MGP_PahariEiJ_G0029879	Zfp839 (MGP_PahariEiJ_G0029878)
Rat	MODERN SPECIES	16	Inf2 (ENSRNOG00000028650) #8	Tmem179 (ENSRNOG00000013128) #9	C6h14orf180 (ENSRNOG00000013097) #10	Kif26a (ENSRNOG00000013661) #11	Aspg (ENSRNOG00000012843) #12	Rd3l (ENSRNOG00000043031)	Tdrd9 (ENSRNOG00000053631) #13	ENSRNOG00000068254 #14	Ppp1r13b (ENSRNOG00000012653) #15	Zfyve21 (ENSRNOG00000012185) #16	Xrcc3 (ENSRNOG00000012141) #17	Klc1 (ENSRNOG00000011572) #18	Coa8 (ENSRNOG00000011542) #19	Bag5 (ENSRNOG00000058841) #20	Trmt61a (ENSRNOG00000011398) #21	Ckb (ENSRNOG00000010872) #22	Mark3 (ENSRNOG00000010330) #23	Eif5 (ENSRNOG00000010218) #24	Diras3 (ENSRNOG00000068695)	Tnfaip2 (ENSRNOG00000010165)	AABR07065589.1 (ENSRNOG00000053429)	Exoc3l4 (ENSRNOG00000010111)	Lbhd2 (ENSRNOG00000043137)	Cdc42bpb (ENSRNOG00000009675)	Amn (ENSRNOG00000009050)	Traf3 (ENSRNOG00000008145)	ENSRNOG00000062855	Rcor1 (ENSRNOG00000049783)	Ankrd9 (ENSRNOG00000008056)	Tecpr2 (ENSRNOG00000021904)	Cinp (ENSRNOG00000008035)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1886				Kif26a (ENSNGAG00000021429) #11	Aspg (ENSNGAG00000016677) #12	Tdrd9 (ENSNGAG00000021858) #13	Rd3l (ENSNGAG00000021769)	Atp5mpl (ENSNGAG00000021885) #14	ENSNGAG00000015662 #15	Zfyve21 (ENSNGAG00000020752) #16	ENSNGAG00000022009 #17	Klc1 (ENSNGAG00000022246) #18	Coa8 (ENSNGAG00000018482) #19	Bag5 (ENSNGAG00000020903) #20	Trmt61a (ENSNGAG00000021119) #21	Ckb (ENSNGAG00000002315) #22	Mark3 (ENSNGAG00000010679) #23	Eif5 (ENSNGAG00000023359) #24	Tnfaip2 (ENSNGAG00000015194)	Exoc3l4 (ENSNGAG00000023525)	Lbhd2 (ENSNGAG00000021417)	Cdc42bpb (ENSNGAG00000003840)	Amn (ENSNGAG00000023699)	Traf3 (ENSNGAG00000011396)	Rcor1 (ENSNGAG00000011313)	Ankrd9 (ENSNGAG00000013700)	Tecpr2 (ENSNGAG00000021277)	Cinp (ENSNGAG00000022938)	Zfp839 (ENSNGAG00000023594)	Mok (ENSNGAG00000024041)	ENSNGAG00000014985
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Hystricomorpha	ANCESTRAL SPECIES	51	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582	ENSGT00390000007686.b.d
Hystricomorpha_a	ANCESTRAL SPECIES	58	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00390000002089.b	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a.p.a #24	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582	ENSGT00390000007686.b.d
Hystricomorpha_b	ANCESTRAL SPECIES	92	ENSGT00390000015553.a.b #7	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a.p.a #24	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582	ENSGT00390000007686.b.d
Degu	DUPLICATION
Degu	MODERN SPECIES	267	AKT1 (ENSODEG00000002014)	ENSODEG00000002046	ADSS1 (ENSODEG00000002065) #7	INF2 (ENSODEG00000002088) #8	TMEM179 (ENSODEG00000002119) #9	KIF26A (ENSODEG00000002137) #11	ASPG (ENSODEG00000002164) #12	TDRD9 (ENSODEG00000002255) #13	ENSODEG00000002459 #14	ENSODEG00000002481 #15	ZFYVE21 (ENSODEG00000002496) #16	XRCC3 (ENSODEG00000002520) #17	KLC1 (ENSODEG00000002575) #18	COA8 (ENSODEG00000002642) #19	TRMT61A (ENSODEG00000001775) #21	ENSODEG00000001805 #22	MARK3 (ENSODEG00000001890) #23	ENSODEG00000018808	ENSODEG00000002043 #24	TNFAIP2 (ENSODEG00000002077)	EXOC3L4 (ENSODEG00000002116)	CDC42BPB (ENSODEG00000002217)	AMN (ENSODEG00000002431)	TRAF3 (ENSODEG00000002457)	RCOR1 (ENSODEG00000002491)	ANKRD9 (ENSODEG00000002556)	ENSODEG00000002569	CINP (ENSODEG00000002583)	ENSODEG00000002597	WDR20 (ENSODEG00000002622)	ENSODEG00000002636
Degu	MODERN SPECIES	45	SLC25A3 (ENSODEG00000009995)	ENSODEG00000010948	APAF1 (ENSODEG00000010122)	ENSODEG00000019813	ENSODEG00000010313	ENSODEG00000010573	ENSODEG00000010991	ENSODEG00000010669	ENSODEG00000011572	BLTP3B (ENSODEG00000010196)	ENSODEG00000010649	ENSODEG00000011114	SLC17A8 (ENSODEG00000010869)	NR1H4 (ENSODEG00000012027)	ENSODEG00000010407	ENSODEG00000009780 #22	ANO4 (ENSODEG00000011009)	ENSODEG00000010202	SLC5A8 (ENSODEG00000010696)	UTP20 (ENSODEG00000013411)	ENSODEG00000010531	SPIC (ENSODEG00000010078)	ENSODEG00000010424	MYBPC1 (ENSODEG00000012077)	CHPT1 (ENSODEG00000011230)	SYCP3 (ENSODEG00000011961)	GNPTAB (ENSODEG00000012289)	DRAM1 (ENSODEG00000011613)	WASHC3 (ENSODEG00000010588)	NUP37 (ENSODEG00000011637)	PARPBP (ENSODEG00000012004)
Guinea pig	MODERN SPECIES	111	ADSS1 (ENSCPOG00000009566) #7	INF2 (ENSCPOG00000015219) #8	ENSCPOG00000039530 #9	KIF26A (ENSCPOG00000019833) #11	ASPG (ENSCPOG00000026114) #12	RD3L (ENSCPOG00000036429)	TDRD9 (ENSCPOG00000002760) #13	ENSCPOG00000033733 #14	PPP1R13B (ENSCPOG00000021000) #15	ZFYVE21 (ENSCPOG00000024426) #16	XRCC3 (ENSCPOG00000022422) #17	KLC1 (ENSCPOG00000026901) #18	COA8 (ENSCPOG00000013098) #19	BAG5 (ENSCPOG00000024833) #20	TRMT61A (ENSCPOG00000033200) #21	CKB (ENSCPOG00000032248) #22	MARK3 (ENSCPOG00000013946) #23	EIF5 (ENSCPOG00000001236) #24	TNFAIP2 (ENSCPOG00000010932)	EXOC3L4 (ENSCPOG00000010016)	LBHD2 (ENSCPOG00000030081)	CDC42BPB (ENSCPOG00000003812)	AMN (ENSCPOG00000022870)	TRAF3 (ENSCPOG00000040090)	RCOR1 (ENSCPOG00000011410)	ANKRD9 (ENSCPOG00000010220)	TECPR2 (ENSCPOG00000000207)	CINP (ENSCPOG00000034861)	ENSCPOG00000021691	ENSCPOG00000035139	WDR20 (ENSCPOG00000002483)
Naked mole-rat female	MODERN SPECIES	18	ADSS1 (ENSHGLG00000010136) #7	ENSHGLG00000011755 #8	TMEM179 (ENSHGLG00000047899) #9	KIF26A (ENSHGLG00000005481) #11	ASPG (ENSHGLG00000005952) #12	RD3L (ENSHGLG00000047639)	TDRD9 (ENSHGLG00000007727) #13	ENSHGLG00000036711 #14	PPP1R13B (ENSHGLG00000006763) #15	ZFYVE21 (ENSHGLG00000011494) #16	XRCC3 (ENSHGLG00000011996) #17	KLC1 (ENSHGLG00000006287) #18	ENSHGLG00000011330 #19	ENSHGLG00000050617 #20	TRMT61A (ENSHGLG00000005604) #21	CKB (ENSHGLG00000005770) #22	MARK3 (ENSHGLG00000007571) #23	EIF5 (ENSHGLG00000015043) #24	TNFAIP2 (ENSHGLG00000015741)	EXOC3L4 (ENSHGLG00000013564)	LBHD2 (ENSHGLG00000045160)	CDC42BPB (ENSHGLG00000018068)	AMN (ENSHGLG00000015524)	ENSHGLG00000036396	TRAF3 (ENSHGLG00000049736)	RCOR1 (ENSHGLG00000005778)	ENSHGLG00000008270	CINP (ENSHGLG00000045981)	ENSHGLG00000032701	ENSHGLG00000009939	ENSHGLG00000045892
Sciuridae	ANCESTRAL SPECIES	8	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862.b #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005010617 #10	ENSSVLG00005010660	KIF26A (ENSSVLG00005010683) #11	ASPG (ENSSVLG00005010927) #12	TDRD9 (ENSSVLG00005011123) #13	RD3L (ENSSVLG00005011833)	ENSSVLG00005011879 #14	PPP1R13B (ENSSVLG00005011931) #15	ZFYVE21 (ENSSVLG00005012130) #16	ENSSVLG00005012176 #17	KLC1 (ENSSVLG00005012331) #18	ENSSVLG00005012491 #17	COA8 (ENSSVLG00005012532) #19	BAG5 (ENSSVLG00005012632) #20	TRMT61A (ENSSVLG00005012687) #21	ENSSVLG00005012740 #22	ENSSVLG00005012973 #23	EIF5 (ENSSVLG00005013171) #24	ENSSVLG00005013280	TNFAIP2 (ENSSVLG00005013312)	EXOC3L4 (ENSSVLG00005013432)	LBHD2 (ENSSVLG00005013492)	CDC42BPB (ENSSVLG00005013599)	AMN (ENSSVLG00005013683)	TRAF3 (ENSSVLG00005013900)	RCOR1 (ENSSVLG00005014032)	ANKRD9 (ENSSVLG00005014170)	TECPR2 (ENSSVLG00005014246)	CINP (ENSSVLG00005014319)	ZNF839 (ENSSVLG00005014407)	MOK (ENSSVLG00005014536)
Eurasian red squirrel	MODERN SPECIES	12	RHOT1 (ENSSVLG00005016781)	RHBDL3 (ENSSVLG00005016946)	C17orf75 (ENSSVLG00005017088)	ZNF207 (ENSSVLG00005017171)	ENSSVLG00005017498	CDK5R1 (ENSSVLG00005017534)	MYO1D (ENSSVLG00005017566)	ENSSVLG00005017677	TMEM98 (ENSSVLG00005017715)	ENSSVLG00005017765	ASIC2 (ENSSVLG00005017834)	ENSSVLG00005018047	ENSSVLG00005018082	ENSSVLG00005018128	ENSSVLG00005018180	ENSSVLG00005018242 #22	ENSSVLG00005018284	ENSSVLG00005018440	ENSSVLG00005018536	ENSSVLG00005018675	ENSSVLG00005018739	PTPN18 (ENSSVLG00005018932)	ENSSVLG00005019214	ENSSVLG00005019266	GPR148 (ENSSVLG00005019335)	AMER3 (ENSSVLG00005019403)	ENSSVLG00005019688	FAM168B (ENSSVLG00005019958)	PLEKHB2 (ENSSVLG00005020018)	ENSSVLG00005020090	HS6ST1 (ENSSVLG00005020153)
Marmotini	ANCESTRAL SPECIES	27	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862.b #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Marmotini_b	ANCESTRAL SPECIES	99	ENSGT00940000155691.d #8	ENSGT00510000048283.d #9	ENSGT00390000001214 #10	ENSGT00940000159075.A #11	ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00390000008212 #19	ENSGT00940000158888 #20	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862.b #23	ENSGT00390000016478.i.a #24	ENSGT00940000164852	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00940000164834	ENSGT01030000234517.H.a	ENSGT00390000007463	ENSGT00940000160538	ENSGT00940000155654	ENSGT00390000018116	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582
Arctic ground squirrel	MODERN SPECIES	320	ENSUPAG00010018585 #8	ENSUPAG00010018579 #8	TMEM179 (ENSUPAG00010018572) #9	ENSUPAG00010018557 #10	KIF26A (ENSUPAG00010018523) #11	ASPG (ENSUPAG00010018503) #12	RD3L (ENSUPAG00010018456)	TDRD9 (ENSUPAG00010018401) #13	ENSUPAG00010018391 #14	PPP1R13B (ENSUPAG00010018373) #15	ZFYVE21 (ENSUPAG00010018360) #16	XRCC3 (ENSUPAG00010018352) #17	KLC1 (ENSUPAG00010018171) #18	BAG5 (ENSUPAG00010018162) #20	TRMT61A (ENSUPAG00010018157) #21	CKB (ENSUPAG00010018151) #22	MARK3 (ENSUPAG00010017955) #23	ENSUPAG00010017935 ##24	ENSUPAG00010017927	TNFAIP2 (ENSUPAG00010017901)	EXOC3L4 (ENSUPAG00010017874)	ENSUPAG00010017871	CDC42BPB (ENSUPAG00010017808)	AMN (ENSUPAG00010017783)	TRAF3 (ENSUPAG00010017758)	RCOR1 (ENSUPAG00010017704)
Squirrel	MODERN SPECIES	221	INF2 (ENSSTOG00000022460) #8	TMEM179 (ENSSTOG00000022354) #9	KIF26A (ENSSTOG00000021225) #11	ASPG (ENSSTOG00000023161) #12	TDRD9 (ENSSTOG00000007890) #13	ENSSTOG00000002831	RD3L (ENSSTOG00000026241)	ATP5MJ (ENSSTOG00000007883) #14	PPP1R13B (ENSSTOG00000010345) #15	ZFYVE21 (ENSSTOG00000010336) #16	XRCC3 (ENSSTOG00000027100) #17	KLC1 (ENSSTOG00000014074) #18	COA8 (ENSSTOG00000019873) #19	BAG5 (ENSSTOG00000027571) #20	TRMT61A (ENSSTOG00000009792) #21	CKB (ENSSTOG00000023632) #22	MARK3 (ENSSTOG00000009776) #23	EIF5 (ENSSTOG00000003683) #24	ENSSTOG00000022018	ENSSTOG00000028490	EXOC3L4 (ENSSTOG00000004186)	ENSSTOG00000026145	KRIT1 (ENSSTOG00000022767)	CYP51A1 (ENSSTOG00000006693)	AKAP9 (ENSSTOG00000006585)	MTERF1 (ENSSTOG00000001846)	FZD1 (ENSSTOG00000013482)	CDK14 (ENSSTOG00000013466)	PTTG1IP2 (ENSSTOG00000030927)	CLDN12 (ENSSTOG00000013464)	GTPBP10 (ENSSTOG00000008220)
Alpin marmot	MODERN SPECIES	1	ADSS1 (ENSMMMG00000005086) #7	ENSMMMG00000005003 #9	ENSMMMG00000004995 #10	KIF26A (ENSMMMG00000004945) #11	ASPG (ENSMMMG00000004917) #12	TDRD9 (ENSMMMG00000004862) #13	RD3L (ENSMMMG00000004838)	ENSMMMG00000004833 #14	PPP1R13B (ENSMMMG00000004811) #15	ZFYVE21 (ENSMMMG00000004805) #16	XRCC3 (ENSMMMG00000004791) #17	KLC1 (ENSMMMG00000004526) #18	COA8 (ENSMMMG00000004518) #19	BAG5 (ENSMMMG00000004510) #20	TRMT61A (ENSMMMG00000004492) #21	CKB (ENSMMMG00000004465) #22	MARK3 (ENSMMMG00000004239) #23	EIF5 (ENSMMMG00000004136) #24	ENSMMMG00000004126	TNFAIP2 (ENSMMMG00000004097)	EXOC3L4 (ENSMMMG00000004056)	LBHD2 (ENSMMMG00000004048)	ENSMMMG00000004030	CDC42BPB (ENSMMMG00000003965)	TRAF3 (ENSMMMG00000003876)	RCOR1 (ENSMMMG00000003851)	ANKRD9 (ENSMMMG00000003841)	TECPR2 (ENSMMMG00000003754)	CINP (ENSMMMG00000003712)	ENSMMMG00000003710	MOK (ENSMMMG00000003666)
Lagomorpha	ANCESTRAL SPECIES	132							ENSGT00390000001610 #12	ENSGT00940000157035 #13	ENSGT00390000002089.b	ENSGT00390000016760 #14	ENSGT00940000153463.a #15	ENSGT00940000159639 #16	ENSGT00930000151053 #17	ENSGT00940000155555 #18	ENSGT00940000154239.a #21	ENSGT00950000182772.A.a.b #22	ENSGT00940000154862 #23	ENSGT00390000016478.i.a #24	ENSGT01030000234613.b.a.a	ENSGT01030000234613.b.a.b	ENSGT00610000087423	ENSGT01030000234517.H.a	ENSGT00940000160538	ENSGT00940000155654	ENSGT00940000157283	ENSGT00390000015784	ENSGT00390000002751	ENSGT00940000159582	ENSGT00390000007686.b.d	ENSGT01020000230401.a.a.b.b.t	ENSGT00940000156103
Pika	MODERN SPECIES	3028															TRMT61A (ENSOPRG00000009039) #21	CKB (ENSOPRG00000009015) #22
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	484								ASPG (ENSOCUG00000023219) #12	TDRD9 (ENSOCUG00000014788) #13	RD3L (ENSOCUG00000039245)	ENSOCUG00000017262 #14	PPP1R13B (ENSOCUG00000010462) #15	ENSOCUG00000023816 #16	XRCC3 (ENSOCUG00000024574) #17	KLC1 (ENSOCUG00000012446) #18	ENSOCUG00000008818 #22	TRMT61A (ENSOCUG00000022502) #21	MARK3 (ENSOCUG00000016664) #23	ENSOCUG00000036466	EIF5 (ENSOCUG00000027975) #24	TNFAIP2 (ENSOCUG00000011484)	EXOC3L4 (ENSOCUG00000023363)	ENSOCUG00000038309	CDC42BPB (ENSOCUG00000010323)	TRAF3 (ENSOCUG00000003672)	TECPR2 (ENSOCUG00000015804)	RCOR1 (ENSOCUG00000003324)	CINP (ENSOCUG00000026866)	ZNF839 (ENSOCUG00000014486)	MOK (ENSOCUG00000013870)	WDR20 (ENSOCUG00000001281)
Rabbit	MODERN SPECIES	433	LDOC1 (ENSOCUG00000023824)	ENSOCUG00000024673	ENSOCUG00000036101	ENSOCUG00000025072	SOX3 (ENSOCUG00000016779)	ENSOCUG00000025136	ENSOCUG00000012140	ENSOCUG00000022633	ATP11C (ENSOCUG00000013087)	MCF2 (ENSOCUG00000027534)	F9 (ENSOCUG00000005240)	ENSOCUG00000030193	ENSOCUG00000033447	ENSOCUG00000012713	ENSOCUG00000006218	ENSOCUG00000027525 #22	ZIC3 (ENSOCUG00000009358)	ENSOCUG00000032516	ENSOCUG00000035410