Sarcopterygii	ANCESTRAL SPECIES	492													ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01070000253869	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Tetrapoda	ANCESTRAL SPECIES	204													ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01070000253869	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000161740	ENSGT00450000040421	ENSGT00390000017045	ENSGT00500000044869.a.b
Amniota	ANCESTRAL SPECIES	34	ENSGT01100000263564.a	ENSGT00940000158721	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000177245	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Mammalia	ANCESTRAL SPECIES	75	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000177245	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32
Theria	ANCESTRAL SPECIES	27	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Eutheria	ANCESTRAL SPECIES	29	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Primates	ANCESTRAL SPECIES	15	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Macaca	ANCESTRAL SPECIES	12	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.a #35	ENSGT00950000182929.B.b #36
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.a.a.b #16	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.a #35	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Rhesus	MODERN SPECIES	10	GIPR (ENSMMUG00000006936) #7	ENSMMUG00000019032 #8	GPR4 (ENSMMUG00000019031) #9	ENSMMUG00000058115 #10	OPA3 (ENSMMUG00000053242) #11	VASP (ENSMMUG00000022938) #12	PPM1N (ENSMMUG00000011715) #13	RTN2 (ENSMMUG00000011716) #14	FOSB (ENSMMUG00000014430) #15	ENSMMUG00000049515 #16	ERCC1 (ENSMMUG00000000718) #17	POLR1G (ENSMMUG00000000717) #18	PPP1R13L (ENSMMUG00000000715) #19	ERCC2 (ENSMMUG00000014419) #20	KLC3 (ENSMMUG00000021891) #21	CKM (ENSMMUG00000013477) #22	MARK4 (ENSMMUG00000018672) #23	ENSMMUG00000018879 #24	BLOC1S3 (ENSMMUG00000022934) #25	NKPD1 (ENSMMUG00000022931) #26	PPP1R37 (ENSMMUG00000022930) #27	ENSMMUG00000060815 #28	ZNF296 (ENSMMUG00000061579) #29	CLASRP (ENSMMUG00000014155) #30	RELB (ENSMMUG00000014153) #31	CLPTM1 (ENSMMUG00000002472) #32	APOC2 (ENSMMUG00000055305) #33	APOC4 (ENSMMUG00000002471) #34	APOC1 (ENSMMUG00000028749) #35	APOE (ENSMMUG00000014305) #36	TOMM40 (ENSMMUG00000014303) #37
Pig-tailed macaque	MODERN SPECIES	551	QPCTL (ENSMNEG00000035757)	ENSMNEG00000039787	GIPR (ENSMNEG00000035353) #7	ENSMNEG00000042527 #8	GPR4 (ENSMNEG00000002892) #9	OPA3 (ENSMNEG00000040409) #11	VASP (ENSMNEG00000031417) #12	PPM1N (ENSMNEG00000033670) #13	RTN2 (ENSMNEG00000034805) #14	FOSB (ENSMNEG00000038931) #15	ERCC1 (ENSMNEG00000012554) #17	POLR1G (ENSMNEG00000028086) #18	PPP1R13L (ENSMNEG00000034033) #19	ERCC2 (ENSMNEG00000042641) #20	KLC3 (ENSMNEG00000040957) #21	CKM (ENSMNEG00000034259) #22	MARK4 (ENSMNEG00000031127) #23	EXOC3L2 (ENSMNEG00000044544) #24	BLOC1S3 (ENSMNEG00000020790) #25	TRAPPC6A (ENSMNEG00000039973)	NKPD1 (ENSMNEG00000012192) #26	PPP1R37 (ENSMNEG00000033613) #27	GEMIN7 (ENSMNEG00000022258) #28	ZNF296 (ENSMNEG00000030927) #29	CLASRP (ENSMNEG00000000043) #30	RELB (ENSMNEG00000036702) #31	CLPTM1 (ENSMNEG00000032456) #32	APOC2 (ENSMNEG00000038542) #33	APOC4 (ENSMNEG00000035912) #34	ENSMNEG00000028685 #35	APOE (ENSMNEG00000032951) #36
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Olive baboon	MODERN SPECIES	12	PPM1N (ENSPANG00000005403) #13	RTN2 (ENSPANG00000009463) #14	FOSB (ENSPANG00000002665) #15	ERCC1 (ENSPANG00000014628) #17	POLR1G (ENSPANG00000014599) #18	PPP1R13L (ENSPANG00000008539) #19	NTF4 (ENSPANG00000005193)	KCNA7 (ENSPANG00000010667)	SNRNP70 (ENSPANG00000004068)	LIN7B (ENSPANG00000002302)	PPFIA3 (ENSPANG00000025706)	HRC (ENSPANG00000031499)	ENSPANG00000030135	ERCC2 (ENSPANG00000032195) #20	KLC3 (ENSPANG00000024512) #21	CKM (ENSPANG00000012803) #22	MARK4 (ENSPANG00000007316) #23	EXOC3L2 (ENSPANG00000008803) #24	BLOC1S3 (ENSPANG00000045388) #25	TRAPPC6A (ENSPANG00000008090)	NKPD1 (ENSPANG00000005270) #26	PPP1R37 (ENSPANG00000002967) #27	GEMIN7 (ENSPANG00000012354) #28	ZNF296 (ENSPANG00000011600) #29	CLASRP (ENSPANG00000012804) #30	RELB (ENSPANG00000007219) #31	CLPTM1 (ENSPANG00000024331) #32	APOC2 (ENSPANG00000024333) #33	APOC4 (ENSPANG00000024334) #34	ENSPANG00000024326 #35	APOE (ENSPANG00000031383) #36
Cercopithecinae_d	ANCESTRAL SPECIES	9	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Sooty mangabey	MODERN SPECIES	228	GIPR (ENSCATG00000039010) #7	EML2 (ENSCATG00000044498) #8	GPR4 (ENSCATG00000015059) #9	OPA3 (ENSCATG00000032509) #11	VASP (ENSCATG00000042996) #12	PPM1N (ENSCATG00000038667) #13	RTN2 (ENSCATG00000038527) #14	FOSB (ENSCATG00000042659) #15	ERCC1 (ENSCATG00000015252) #17	POLR1G (ENSCATG00000030677) #18	PPP1R13L (ENSCATG00000034656) #19	ENSCATG00000031579 #20	ENSCATG00000044649 #20	KLC3 (ENSCATG00000043270) #21	ENSCATG00000033695	CKM (ENSCATG00000014030) #22	MARK4 (ENSCATG00000045079) #23	EXOC3L2 (ENSCATG00000038609) #24	BLOC1S3 (ENSCATG00000015025) #25	TRAPPC6A (ENSCATG00000042258)	NKPD1 (ENSCATG00000015132) #26	PPP1R37 (ENSCATG00000039813) #27	GEMIN7 (ENSCATG00000015354) #28	ZNF296 (ENSCATG00000015397) #29	CLASRP (ENSCATG00000040827) #30	RELB (ENSCATG00000018277) #31	CLPTM1 (ENSCATG00000041177) #32	APOC2 (ENSCATG00000033379) #33	APOC4 (ENSCATG00000028747) #34	ENSCATG00000030093 ##35	ENSCATG00000039865 #35
Drill	MODERN SPECIES	494	GIPR (ENSMLEG00000043576) #7	ENSMLEG00000030229 #8	GPR4 (ENSMLEG00000003807) #9	ENSMLEG00000031803	OPA3 (ENSMLEG00000040108) #11	VASP (ENSMLEG00000041511) #12	ENSMLEG00000013387 #13	RTN2 (ENSMLEG00000031919) #14	FOSB (ENSMLEG00000033569) #15	ERCC1 (ENSMLEG00000029656) #17	POLR1G (ENSMLEG00000043530) #18	ENSMLEG00000031086 #19	ERCC2 (ENSMLEG00000043492) #20	KLC3 (ENSMLEG00000040381) #21	ENSMLEG00000028116	CKM (ENSMLEG00000037963) #22	MARK4 (ENSMLEG00000043604) #23	EXOC3L2 (ENSMLEG00000043963) #24	TRAPPC6A (ENSMLEG00000030819)	PPP1R37 (ENSMLEG00000044303) #27	GEMIN7 (ENSMLEG00000028032) #28	ZNF296 (ENSMLEG00000031124) #29	CLASRP (ENSMLEG00000034161) #30	RELB (ENSMLEG00000041838) #31	CLPTM1 (ENSMLEG00000030661) #32	APOC2 (ENSMLEG00000043412) #33	APOC4 (ENSMLEG00000027913) #34	APOC1 (ENSMLEG00000033709) #35	NECTIN2 (ENSMLEG00000043645)	BCAM (ENSMLEG00000028754)	BCL3 (ENSMLEG00000033523)
Vervet Monkey	MODERN SPECIES	25	QPCTL (ENSCSAG00000003156)	SNRPD2 (ENSCSAG00000003157)	GIPR (ENSCSAG00000003163) #7	GPR4 (ENSCSAG00000019626) #9	OPA3 (ENSCSAG00000003168) #11	VASP (ENSCSAG00000003169) #12	PPM1N (ENSCSAG00000003172) #13	RTN2 (ENSCSAG00000003175) #14	ENSCSAG00000003176 #15	ERCC1 (ENSCSAG00000003179) #17	POLR1G (ENSCSAG00000003181) #18	PPP1R13L (ENSCSAG00000003183) #19	ENSCSAG00000003187 #19	ERCC2 (ENSCSAG00000003189) #20	KLC3 (ENSCSAG00000003201) #21	CKM (ENSCSAG00000003204) #22	MARK4 (ENSCSAG00000003211) #23	ENSCSAG00000019625	EXOC3L2 (ENSCSAG00000003214) #24	BLOC1S3 (ENSCSAG00000019624) #25	TRAPPC6A (ENSCSAG00000003218)	NKPD1 (ENSCSAG00000019623) #26	PPP1R37 (ENSCSAG00000003221) #27	GEMIN7 (ENSCSAG00000019622) #28	ZNF296 (ENSCSAG00000003225) #29	CLASRP (ENSCSAG00000003231) #30	RELB (ENSCSAG00000003233) #31	CLPTM1 (ENSCSAG00000003235) #32	APOC2 (ENSCSAG00000003240) #33	APOC4 (ENSCSAG00000003243) #34	APOC1 (ENSCSAG00000003245) #35
Rhinopithecus	ANCESTRAL SPECIES	16	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765.p #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.a #35	ENSGT00950000182929.B.b #36
Golden snub-nosed monkey	MODERN SPECIES	2027	SNRPD2 (ENSRROG00000034764)	GIPR (ENSRROG00000031321) #7	EML2 (ENSRROG00000035796) #8	GPR4 (ENSRROG00000019999) #9	OPA3 (ENSRROG00000034269) #11	VASP (ENSRROG00000044619) #12	PPM1N (ENSRROG00000029244) #13	RTN2 (ENSRROG00000038364) #14	ENSRROG00000044485	FOSB (ENSRROG00000014678) #15	ERCC1 (ENSRROG00000043870) #17	POLR1G (ENSRROG00000043410) #18	ENSRROG00000041629 #19	ERCC2 (ENSRROG00000040423) #20	KLC3 (ENSRROG00000006762) #21	CKM (ENSRROG00000043521) #22	ENSRROG00000028468	MARK4 (ENSRROG00000042751) #23	EXOC3L2 (ENSRROG00000033651) #24	TRAPPC6A (ENSRROG00000031935)	PPP1R37 (ENSRROG00000043405) #27	GEMIN7 (ENSRROG00000044813) #28	ZNF296 (ENSRROG00000037896) #29	CLASRP (ENSRROG00000045419) #30	RELB (ENSRROG00000031217) #31	CLPTM1 (ENSRROG00000030689) #32	APOC2 (ENSRROG00000045650) #33	APOC4 (ENSRROG00000031862) #34	ENSRROG00000039964 #35	APOE (ENSRROG00000029603) #36	TOMM40 (ENSRROG00000037978) #37
Black snub-nosed monkey	MODERN SPECIES	477	QPCTL (ENSRBIG00000037229)	ENSRBIG00000040969	GIPR (ENSRBIG00000044071) #7	EML2 (ENSRBIG00000027020) #8	GPR4 (ENSRBIG00000032340) #9	OPA3 (ENSRBIG00000038135) #11	ENSRBIG00000034996 #12	PPM1N (ENSRBIG00000033587) #13	ENSRBIG00000034412 #14	FOSB (ENSRBIG00000028796) #15	ERCC1 (ENSRBIG00000043956) #17	POLR1G (ENSRBIG00000040738) #18	ENSRBIG00000028434 #19	ERCC2 (ENSRBIG00000031575) #20	KLC3 (ENSRBIG00000029912) #21	CKM (ENSRBIG00000040733) #22	ENSRBIG00000003076	MARK4 (ENSRBIG00000042653) #23	EXOC3L2 (ENSRBIG00000029965) #24	BLOC1S3 (ENSRBIG00000010173) #25	TRAPPC6A (ENSRBIG00000028873)	PPP1R37 (ENSRBIG00000034685) #27	ZNF296 (ENSRBIG00000038795) #29	CLASRP (ENSRBIG00000042924) #30	RELB (ENSRBIG00000039429) #31	CLPTM1 (ENSRBIG00000022972) #32	APOC2 (ENSRBIG00000034907) #33	APOC4 (ENSRBIG00000039672) #34	ENSRBIG00000030257	APOE (ENSRBIG00000034780) #36	TOMM40 (ENSRBIG00000041415) #37
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00390000013067.a.a	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Hominidae	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Pan	ANCESTRAL SPECIES	9	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039.e #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.c.b ##35	ENSGT00390000011584.c.a #35
Chimpanzee	MODERN SPECIES	10	QPCTL (ENSPTRG00000011163)	SNRPD2 (ENSPTRG00000011162)	GIPR (ENSPTRG00000050104) #7	ENSPTRG00000048889 #8	GPR4 (ENSPTRG00000051128) #9	OPA3 (ENSPTRG00000045719) #11	VASP (ENSPTRG00000046601) #12	PPM1N (ENSPTRG00000047461) #13	RTN2 (ENSPTRG00000047264) #14	FOSB (ENSPTRG00000046160) #15	ERCC1 (ENSPTRG00000011152) #17	POLR1G (ENSPTRG00000011151) #18	PPP1R13L (ENSPTRG00000011150) #19	ERCC2 (ENSPTRG00000011149) #20	KLC3 (ENSPTRG00000011148) #21	CKM (ENSPTRG00000011147) #22	MARK4 (ENSPTRG00000011145) #23	EXOC3L2 (ENSPTRG00000011144) #24	BLOC1S3 (ENSPTRG00000011143) #25	TRAPPC6A (ENSPTRG00000043883)	NKPD1 (ENSPTRG00000011141) #26	PPP1R37 (ENSPTRG00000011139) #27	GEMIN7 (ENSPTRG00000044428) #28	ZNF296 (ENSPTRG00000011136) #29	CLASRP (ENSPTRG00000022583) #30	RELB (ENSPTRG00000011133) #31	CLPTM1 (ENSPTRG00000011131) #32	APOC4 (ENSPTRG00000033962) #34	ENSPTRG00000038932 ##35	APOC1 (ENSPTRG00000011128) #35	APOE (ENSPTRG00000011127) #36
Bonobo	MODERN SPECIES	10	QPCTL (ENSPPAG00000028397)	SNRPD2 (ENSPPAG00000038031)	GIPR (ENSPPAG00000030152) #7	ENSPPAG00000013251 #8	GPR4 (ENSPPAG00000008436) #9	ENSPPAG00000040725 #11	VASP (ENSPPAG00000037088) #12	ENSPPAG00000030480 #13	RTN2 (ENSPPAG00000038328) #14	FOSB (ENSPPAG00000035998) #15	ERCC1 (ENSPPAG00000043568) #17	POLR1G (ENSPPAG00000004958) #18	ENSPPAG00000036951 #19	ERCC2 (ENSPPAG00000044005) #20	KLC3 (ENSPPAG00000043966) #21	CKM (ENSPPAG00000037821) #22	MARK4 (ENSPPAG00000031718) #23	ENSPPAG00000039633 #24	TRAPPC6A (ENSPPAG00000025811)	PPP1R37 (ENSPPAG00000031033) #27	GEMIN7 (ENSPPAG00000023831) #28	ZNF296 (ENSPPAG00000016242) #29	CLASRP (ENSPPAG00000040215) #30	RELB (ENSPPAG00000030963) #31	CLPTM1 (ENSPPAG00000038262) #32	ENSPPAG00000042437 #33	ENSPPAG00000036696 ##35	APOE (ENSPPAG00000034562) #36	TOMM40 (ENSPPAG00000034103) #37	NECTIN2 (ENSPPAG00000041775)	BCAM (ENSPPAG00000034413)
Human	MODERN SPECIES	10	QPCTL (ENSG00000011478)	SNRPD2 (ENSG00000125743)	GIPR (ENSG00000010310) #7	EML2 (ENSG00000125746) #8	GPR4 (ENSG00000177464) #9	OPA3 (ENSG00000125741) #11	VASP (ENSG00000125753) #12	PPM1N (ENSG00000213889) #13	RTN2 (ENSG00000125744) #14	FOSB (ENSG00000125740) #15	ERCC1 (ENSG00000012061) #17	POLR1G (ENSG00000117877) #18	PPP1R13L (ENSG00000104881) #19	ERCC2 (ENSG00000104884) #20	KLC3 (ENSG00000104892) #21	CKM (ENSG00000104879) #22	EXOC3L2 (ENSG00000283632) #24	BLOC1S3 (ENSG00000189114) #25	TRAPPC6A (ENSG00000007255)	NKPD1 (ENSG00000179846) #26	PPP1R37 (ENSG00000104866) #27	MARK4 (ENSG00000007047) #23	GEMIN7 (ENSG00000142252) #28	ZNF296 (ENSG00000170684) #29	CLASRP (ENSG00000104859) #30	RELB (ENSG00000104856) #31	CLPTM1 (ENSG00000104853) #32	APOC2 (ENSG00000234906) #33	APOC4-APOC2 (ENSG00000224916)	APOC4 (ENSG00000267467) #34	APOC1 (ENSG00000130208) ##35
Gorilla	MODERN SPECIES	10	FBXO46 (ENSGGOG00000027287)	QPCTL (ENSGGOG00000002353)	SNRPD2 (ENSGGOG00000002350)	GIPR (ENSGGOG00000016144) #7	ENSGGOG00000015482 #8	GPR4 (ENSGGOG00000043968) #9	ENSGGOG00000009890 #11	VASP (ENSGGOG00000009879) #12	PPM1N (ENSGGOG00000000024) #13	RTN2 (ENSGGOG00000009863) #14	FOSB (ENSGGOG00000010952) #15	ERCC1 (ENSGGOG00000014332) #17	ENSGGOG00000015872 #18	ERCC2 (ENSGGOG00000015842) #20	KLC3 (ENSGGOG00000015830) #21	CKM (ENSGGOG00000008806) #22	MARK4 (ENSGGOG00000008801) #23	EXOC3L2 (ENSGGOG00000010717) #24	ENSGGOG00000028003	TRAPPC6A (ENSGGOG00000008686)	ENSGGOG00000008682 #26	PPP1R37 (ENSGGOG00000008674) #27	GEMIN7 (ENSGGOG00000037037) #28	ZNF296 (ENSGGOG00000003398) #29	CLASRP (ENSGGOG00000003384) #30	RELB (ENSGGOG00000003380) #31	CLPTM1 (ENSGGOG00000008020) #32	ENSGGOG00000022601 #33	APOC1A (ENSGGOG00000022078) ##35	ENSGGOG00000037352 #35	APOE (ENSGGOG00000006377) #36
Orangutan	MODERN SPECIES	10	QPCTL (ENSPPYG00000010130)	ENSPPYG00000010129	GIPR (ENSPPYG00000010128) #7	ENSPPYG00000010127 #8	GPR4 (ENSPPYG00000010126) #9	ENSPPYG00000032022 #11	VASP (ENSPPYG00000010124) #12	PPM1N (ENSPPYG00000030671) #13	RTN2 (ENSPPYG00000010122) #14	FOSB (ENSPPYG00000010121) #15	ERCC1 (ENSPPYG00000010120) #17	POLR1G (ENSPPYG00000010119) #18	PPP1R13L (ENSPPYG00000010118) #19	ERCC2 (ENSPPYG00000010117) #20	KLC3 (ENSPPYG00000010116) #21	CKM (ENSPPYG00000010114) #22	MARK4 (ENSPPYG00000010113) #23	EXOC3L2 (ENSPPYG00000034441) #24	BLOC1S3 (ENSPPYG00000010110) #25	ENSPPYG00000010109	NKPD1 (ENSPPYG00000010108) #26	PPP1R37 (ENSPPYG00000010107) #27	GEMIN7 (ENSPPYG00000010106) #28	ZNF296 (ENSPPYG00000010105) #29	CLASRP (ENSPPYG00000010104) #30	RELB (ENSPPYG00000010103) #31	CLPTM1 (ENSPPYG00000010102) #32	APOC2 (ENSPPYG00000010101) #33	APOC4 (ENSPPYG00000040693) #34	ENSPPYG00000010100 #35	APOE (ENSPPYG00000010099) #36
Gibbon	MODERN SPECIES	7	ENSNLEG00000002287	SNRPD2 (ENSNLEG00000002274)	ENSNLEG00000002246 #8	GPR4 (ENSNLEG00000030194) #9	ENSNLEG00000002240 #11	VASP (ENSNLEG00000002237) #12	PPM1N (ENSNLEG00000002225) #13	RTN2 (ENSNLEG00000002100) #14	FOSB (ENSNLEG00000002090) #15	ENSNLEG00000002069 #17	POLR1G (ENSNLEG00000035363) #18	ENSNLEG00000002011 #19	ENSNLEG00000001994 #20	ENSNLEG00000001990 #21	ENSNLEG00000035942	ENSNLEG00000001978 #22	MARK4 (ENSNLEG00000001909) #23	ENSNLEG00000001907 #24	BLOC1S3 (ENSNLEG00000018406) #25	TRAPPC6A (ENSNLEG00000033419)	ENSNLEG00000033759 #26	PPP1R37 (ENSNLEG00000001875) #27	GEMIN7 (ENSNLEG00000001846) #28	ZNF296 (ENSNLEG00000001844) #29	CLASRP (ENSNLEG00000001811) #30	RELB (ENSNLEG00000001809) #31	CLPTM1 (ENSNLEG00000001779) #32	APOC4 (ENSNLEG00000001763) #34	APOE (ENSNLEG00000001740) #36	ENSNLEG00000001726 #37	ENSNLEG00000026567
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Cebidae	ANCESTRAL SPECIES	8	ENSGT00390000003107.b	ENSGT00390000017608.b.nb.d	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765.k #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Cebidae_a	ANCESTRAL SPECIES	20	ENSGT00390000017608.b.nb.c.b	ENSGT00390000017608.b.nb.d	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765.k #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Capuchin	MODERN SPECIES	296	QPCTL (ENSCCAG00000006394)	SNRPD2 (ENSCCAG00000035396)	GIPR (ENSCCAG00000026591) #7	EML2 (ENSCCAG00000030345) #8	GPR4 (ENSCCAG00000014726) #9	OPA3 (ENSCCAG00000027564) #11	ENSCCAG00000029400 #12	PPM1N (ENSCCAG00000033653) #13	RTN2 (ENSCCAG00000029809) #14	FOSB (ENSCCAG00000025333) #15	ERCC1 (ENSCCAG00000019653) #17	POLR1G (ENSCCAG00000024253) #18	PPP1R13L (ENSCCAG00000033595) #19	ERCC2 (ENSCCAG00000019831) #20	KLC3 (ENSCCAG00000023117) #21	CKM (ENSCCAG00000021924) #22	MARK4 (ENSCCAG00000032781) #23	EXOC3L2 (ENSCCAG00000019683) #24	BLOC1S3 (ENSCCAG00000002868) #25	TRAPPC6A (ENSCCAG00000034136)	NKPD1 (ENSCCAG00000028944) #26	PPP1R37 (ENSCCAG00000037362) #27	ZNF296 (ENSCCAG00000007856) #29	CLASRP (ENSCCAG00000029385) #30	RELB (ENSCCAG00000026037) #31	CLPTM1 (ENSCCAG00000032526) #32	APOC2 (ENSCCAG00000024617) #33	APOC4 (ENSCCAG00000022993) #34	ENSCCAG00000037884 #35	APOE (ENSCCAG00000017371) #36	TOMM40 (ENSCCAG00000034572) #37
Bolivian squirrel monkey	MODERN SPECIES	169	FBXO46 (ENSSBOG00000016576)	ENSSBOG00000035164	GIPR (ENSSBOG00000023899) #7	EML2 (ENSSBOG00000022777) #8	GPR4 (ENSSBOG00000019451) #9	OPA3 (ENSSBOG00000030278) #11	ENSSBOG00000025296 #12	PPM1N (ENSSBOG00000035628) #13	RTN2 (ENSSBOG00000029177) #14	FOSB (ENSSBOG00000001761) #15	ERCC1 (ENSSBOG00000035042) #17	POLR1G (ENSSBOG00000032782) #18	ENSSBOG00000032923 #19	ERCC2 (ENSSBOG00000030257) #20	KLC3 (ENSSBOG00000033253) #21	CKM (ENSSBOG00000030517) #22	MARK4 (ENSSBOG00000020814) #23	ENSSBOG00000024944 #24	ENSSBOG00000032180	TRAPPC6A (ENSSBOG00000029896)	NKPD1 (ENSSBOG00000001197) #26	PPP1R37 (ENSSBOG00000018944) #27	ZNF296 (ENSSBOG00000022159) #29	ENSSBOG00000029935 #30	RELB (ENSSBOG00000032389) #31	CLPTM1 (ENSSBOG00000033277) #32	APOC2 (ENSSBOG00000034451) #33	APOC4 (ENSSBOG00000020365) #34	ENSSBOG00000035185	APOE (ENSSBOG00000033993) #36	ENSSBOG00000028680 #37
Marmoset	MODERN SPECIES	14	QPCTL (ENSCJAG00000082509)	ENSCJAG00000019291	GIPR (ENSCJAG00000012422) #7	EML2 (ENSCJAG00000012469) #8	GPR4 (ENSCJAG00000047762) #9	OPA3 (ENSCJAG00000045305) #11	ENSCJAG00000012536 #12	PPM1N (ENSCJAG00000012560) #13	RTN2 (ENSCJAG00000012569) #14	FOSB (ENSCJAG00000012636) #15	ERCC1 (ENSCJAG00000038856) #17	POLR1G (ENSCJAG00000012689) #18	PPP1R13L (ENSCJAG00000012693) #19	ERCC2 (ENSCJAG00000012716) #20	KLC3 (ENSCJAG00000012757) #21	CKM (ENSCJAG00000045755) #22	MARK4 (ENSCJAG00000012801) #23	EXOC3L2 (ENSCJAG00000012854) #24	BLOC1S3 (ENSCJAG00000012780) #25	TRAPPC6A (ENSCJAG00000012869)	NKPD1 (ENSCJAG00000012882) #26	PPP1R37 (ENSCJAG00000012886) #27	ENSCJAG00000085678 #28	ZNF296 (ENSCJAG00000012912) #29	CLASRP (ENSCJAG00000012926) #30	RELB (ENSCJAG00000012991) #31	CLPTM1 (ENSCJAG00000013016) #32	ENSCJAG00000070240 #33	ENSCJAG00000078941 #35	APOE (ENSCJAG00000084338) #36	TOMM40 (ENSCJAG00000013072) #37
Mas night monkey	MODERN SPECIES	1284	QPCTL (ENSANAG00000035587)	ENSANAG00000019777	GIPR (ENSANAG00000033440) #7	ENSANAG00000029331 #8	GPR4 (ENSANAG00000019611) #9	OPA3 (ENSANAG00000023653) #11	ENSANAG00000034983 #12	PPM1N (ENSANAG00000022999) #13	RTN2 (ENSANAG00000032309) #14	FOSB (ENSANAG00000035322) #15	ERCC1 (ENSANAG00000029523) #17	POLR1G (ENSANAG00000022477) #18	PPP1R13L (ENSANAG00000023805) #19	ERCC2 (ENSANAG00000022694) #20	ENSANAG00000020750 #21	CKM (ENSANAG00000029385) #22	MARK4 (ENSANAG00000038277) #23	EXOC3L2 (ENSANAG00000037617) #24	TRAPPC6A (ENSANAG00000032868)	NKPD1 (ENSANAG00000017851) #26	PPP1R37 (ENSANAG00000019671) #27	GEMIN7 (ENSANAG00000019968) #28	ZNF296 (ENSANAG00000038105) #29	CLASRP (ENSANAG00000023127) #30	RELB (ENSANAG00000023130) #31	CLPTM1 (ENSANAG00000027215) #32	APOC2 (ENSANAG00000027288) #33	APOC4 (ENSANAG00000027471) #34	APOE (ENSANAG00000028543) #36	TOMM40 (ENSANAG00000034303) #37	NECTIN2 (ENSANAG00000032757)
Tarsier	MODERN SPECIES	1118											PTHLH (ENSTSYG00000007775)	KLHL42 (ENSTSYG00000003823)	MANSC4 (ENSTSYG00000003843)	MRPS35 (ENSTSYG00000003293)	PPFIBP1 (ENSTSYG00000010809)	CKM (ENSTSYG00000027885) #22	MARK4 (ENSTSYG00000034683) #23
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00390000003107.b	ENSGT00390000017608.b.nb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00960000192363	ENSGT00950000182929.B.b #36
Coquerels sifaka	MODERN SPECIES	568	QPCTL (ENSPCOG00000018844)	SNRPD2 (ENSPCOG00000028811)	GIPR (ENSPCOG00000021969) #7	EML2 (ENSPCOG00000018079) #8	GPR4 (ENSPCOG00000000191) #9	OPA3 (ENSPCOG00000017860) #11	VASP (ENSPCOG00000013513) #12	PPM1N (ENSPCOG00000022242) #13	RTN2 (ENSPCOG00000004285) #14	FOSB (ENSPCOG00000008886) #15	ERCC1 (ENSPCOG00000028786) #17	POLR1G (ENSPCOG00000028780) #18	PPP1R13L (ENSPCOG00000022581) #19	ERCC2 (ENSPCOG00000016671) #20	KLC3 (ENSPCOG00000019370) #21	CKM (ENSPCOG00000025111) #22	MARK4 (ENSPCOG00000027851) #23	EXOC3L2 (ENSPCOG00000017537) #24	TRAPPC6A (ENSPCOG00000022562)	NKPD1 (ENSPCOG00000020220) #26	PPP1R37 (ENSPCOG00000021765) #27	ZNF296 (ENSPCOG00000017587) #29	CLASRP (ENSPCOG00000018016) #30	RELB (ENSPCOG00000013127) #31	CLPTM1 (ENSPCOG00000022928) #32	APOC2 (ENSPCOG00000026300) #33	APOC4 (ENSPCOG00000019360) #34	ENSPCOG00000017937	APOE (ENSPCOG00000016579) #36	TOMM40 (ENSPCOG00000015079) #37	NECTIN2 (ENSPCOG00000020498)
Greater bamboo lemur	MODERN SPECIES	79	QPCTL (ENSPSMG00000024775)	ENSPSMG00000024780	GIPR (ENSPSMG00000024806) #7	EML2 (ENSPSMG00000024861) #8	GPR4 (ENSPSMG00000024886) #9	OPA3 (ENSPSMG00000024888) #11	VASP (ENSPSMG00000024889) #12	PPM1N (ENSPSMG00000024901) #13	RTN2 (ENSPSMG00000024946) #14	FOSB (ENSPSMG00000024967) #15	ERCC1 (ENSPSMG00000024982) #17	POLR1G (ENSPSMG00000024991) #18	PPP1R13L (ENSPSMG00000025002) #19	ERCC2 (ENSPSMG00000025033) #20	KLC3 (ENSPSMG00000025052) #21	CKM (ENSPSMG00000025058) #22	MARK4 (ENSPSMG00000025099) #23	EXOC3L2 (ENSPSMG00000025111) #24	TRAPPC6A (ENSPSMG00000025115)	BLOC1S3 (ENSPSMG00000025117) #25	NKPD1 (ENSPSMG00000025121) #26	PPP1R37 (ENSPSMG00000025125) #27	ENSPSMG00000025129 #28	ZNF296 (ENSPSMG00000025135) #29	CLASRP (ENSPSMG00000025177) #30	RELB (ENSPSMG00000025196) #31	CLPTM1 (ENSPSMG00000025217) #32	APOC2 (ENSPSMG00000025228) #33	APOC4 (ENSPSMG00000025229) #34	ENSPSMG00000025234	APOE (ENSPSMG00000025250) #36
Mouse lemur	MODERN SPECIES	14	QPCTL (ENSMICG00000001842)	SNRPD2 (ENSMICG00000031545)	GIPR (ENSMICG00000001830) #7	EML2 (ENSMICG00000001822) #8	GPR4 (ENSMICG00000046993) #9	OPA3 (ENSMICG00000046590) #11	VASP (ENSMICG00000044750) #12	PPM1N (ENSMICG00000029291) #13	RTN2 (ENSMICG00000003139) #14	FOSB (ENSMICG00000001809) #15	ERCC1 (ENSMICG00000001806) #17	POLR1G (ENSMICG00000031258) #18	PPP1R13L (ENSMICG00000001794) #19	ERCC2 (ENSMICG00000000635) #20	KLC3 (ENSMICG00000000630) #21	CKM (ENSMICG00000000625) #22	MARK4 (ENSMICG00000000621) #23	EXOC3L2 (ENSMICG00000031664) #24	TRAPPC6A (ENSMICG00000002475)	NKPD1 (ENSMICG00000030601) #26	PPP1R37 (ENSMICG00000007018) #27	ZNF296 (ENSMICG00000007012) #29	CLASRP (ENSMICG00000006996) #30	RELB (ENSMICG00000006991) #31	CLPTM1 (ENSMICG00000006981) #32	APOC2 (ENSMICG00000030597) #33	APOC4 (ENSMICG00000034209) #34	ENSMICG00000045015 #35	APOE (ENSMICG00000031968) #36	TOMM40 (ENSMICG00000014041) #37	NECTIN2 (ENSMICG00000014030)
Bushbaby	MODERN SPECIES	267	QPCTL (ENSOGAG00000003952)	SNRPD2 (ENSOGAG00000030128)	GIPR (ENSOGAG00000012568) #7	EML2 (ENSOGAG00000033974) #8	GPR4 (ENSOGAG00000029132) #9	OPA3 (ENSOGAG00000033310) #11	VASP (ENSOGAG00000011276) #12	PPM1N (ENSOGAG00000033341) #13	RTN2 (ENSOGAG00000033252) #14	FOSB (ENSOGAG00000013790) #15	ERCC1 (ENSOGAG00000030471) #17	POLR1G (ENSOGAG00000013782) #18	PPP1R13L (ENSOGAG00000013774) #19	ERCC2 (ENSOGAG00000007834) #20	KLC3 (ENSOGAG00000027807) #21	CKM (ENSOGAG00000007832) #22	MARK4 (ENSOGAG00000011279) #23	ENSOGAG00000002937 #24	TRAPPC6A (ENSOGAG00000033611)	NKPD1 (ENSOGAG00000032471) #26	PPP1R37 (ENSOGAG00000027337) #27	GEMIN7 (ENSOGAG00000014987) #28	ENSOGAG00000025116 #29	CLASRP (ENSOGAG00000034160) #30	RELB (ENSOGAG00000012777) #31	CLPTM1 (ENSOGAG00000012773) #32	APOC4 (ENSOGAG00000012770) #34	APOC1 (ENSOGAG00000028159) #35	APOE (ENSOGAG00000016031) #36	ENSOGAG00000012769 #37	NECTIN2 (ENSOGAG00000012765)
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Tree shrew	MODERN SPECIES	5804																CKM (ENSTBEG00000000149) #22	MARK4 (ENSTBEG00000000142) #23
Glires	ANCESTRAL SPECIES	6	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Hystricomorpha_a	ANCESTRAL SPECIES	39	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Guinea pig	MODERN SPECIES	80	ENSCPOG00000035154	GIPR (ENSCPOG00000002438) #7	EML2 (ENSCPOG00000013465) #8	OPA3 (ENSCPOG00000035437) #11	VASP (ENSCPOG00000010236) #12	PPM1N (ENSCPOG00000034457) #13	RTN2 (ENSCPOG00000011382) #14	FOSB (ENSCPOG00000015608) #15	ERCC1 (ENSCPOG00000015606) #17	POLR1G (ENSCPOG00000033293) #18	ENSCPOG00000036376	PPP1R13L (ENSCPOG00000015602) #19	ERCC2 (ENSCPOG00000015600) #20	KLC3 (ENSCPOG00000015599) #21	ENSCPOG00000039314	CKM (ENSCPOG00000019609) #22	MARK4 (ENSCPOG00000004117) #23	EXOC3L2 (ENSCPOG00000021579) #24	ENSCPOG00000024355	ENSCPOG00000020516	BLOC1S3 (ENSCPOG00000035473) #25	TRAPPC6A (ENSCPOG00000015115)	NKPD1 (ENSCPOG00000026614) #26	PPP1R37 (ENSCPOG00000006371) #27	GEMIN7 (ENSCPOG00000037844) #28	ZNF296 (ENSCPOG00000010291) #29	CLASRP (ENSCPOG00000010282) #30	RELB (ENSCPOG00000010273) #31	CLPTM1 (ENSCPOG00000010264) #32	APOC2 (ENSCPOG00000009302) #33	ENSCPOG00000009300 #34
Hystricomorpha_b	ANCESTRAL SPECIES	49	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Long-tailed chinchilla	MODERN SPECIES	262										FOSB (ENSCLAG00000001320) #15	ERCC1 (ENSCLAG00000004731) #17	POLR1G (ENSCLAG00000004691) #18	PPP1R13L (ENSCLAG00000004002) #19	ERCC2 (ENSCLAG00000002595) #20	KLC3 (ENSCLAG00000002431) #21	CKM (ENSCLAG00000002240) #22	MARK4 (ENSCLAG00000002104) #23	EXOC3L2 (ENSCLAG00000002073) #24	ENSCLAG00000001896	BLOC1S3 (ENSCLAG00000002758) #25	TRAPPC6A (ENSCLAG00000002688)	NKPD1 (ENSCLAG00000002500) #26	PPP1R37 (ENSCLAG00000002455) #27	ZNF296 (ENSCLAG00000002406) #29	CLASRP (ENSCLAG00000002206) #30	RELB (ENSCLAG00000001435) #31	CLPTM1 (ENSCLAG00000001254) #32	ENSCLAG00000001239 #34	APOC2 (ENSCLAG00000001142) #33	ENSCLAG00000001127	APOE (ENSCLAG00000001528) #36
Degu	MODERN SPECIES	238	QPCTL (ENSODEG00000012513)	ENSODEG00000008857	GIPR (ENSODEG00000010030) #7	EML2 (ENSODEG00000007963) #8	GPR4 (ENSODEG00000019587) #9	OPA3 (ENSODEG00000009423) #11	VASP (ENSODEG00000007915) #12	PPM1N (ENSODEG00000009338) #13	RTN2 (ENSODEG00000007986) #14	FOSB (ENSODEG00000009394) #15	ERCC1 (ENSODEG00000007322) #17	POLR1G (ENSODEG00000007587) #18	PPP1R13L (ENSODEG00000008375) #19	ERCC2 (ENSODEG00000008340) #20	KLC3 (ENSODEG00000009706) #21	CKM (ENSODEG00000008279) #22	MARK4 (ENSODEG00000012545) #23	EXOC3L2 (ENSODEG00000009155) #24	TRAPPC6A (ENSODEG00000008693)	NKPD1 (ENSODEG00000008357) #26	PPP1R37 (ENSODEG00000008101) #27	GEMIN7 (ENSODEG00000009107) #28	ZNF296 (ENSODEG00000008238) #29	CLASRP (ENSODEG00000008407) #30	RELB (ENSODEG00000008207) #31	CLPTM1 (ENSODEG00000008066) #32	APOC2 (ENSODEG00000008478) #33	ENSODEG00000011088 #34	ENSODEG00000010383 #35	APOE (ENSODEG00000008747) #36	ENSODEG00000010615 #37
Naked mole-rat female	MODERN SPECIES	21	GPR4 (ENSHGLG00000036046) #9	OPA3 (ENSHGLG00000016016) #11	VASP (ENSHGLG00000018306) #12	ENSHGLG00000041051 #13	ENSHGLG00000033452 #15	ENSHGLG00000042028 #13	RTN2 (ENSHGLG00000002943) #14	FOSB (ENSHGLG00000004044) #15	ERCC1 (ENSHGLG00000003045) #17	POLR1G (ENSHGLG00000002795) #18	PPP1R13L (ENSHGLG00000002359) #19	ERCC2 (ENSHGLG00000018685) #20	KLC3 (ENSHGLG00000003781) #21	ENSHGLG00000003471	ENSHGLG00000003316	ENSHGLG00000002629 #22	ENSHGLG00000003636 #23	ENSHGLG00000003068 #24	ENSHGLG00000042272	ENSHGLG00000011476	CYP2S1 (ENSHGLG00000005323)	AXL (ENSHGLG00000018919)	HNRNPUL1 (ENSHGLG00000007171)	CCDC97 (ENSHGLG00000035865)	TGFB1 (ENSHGLG00000007211)	B9D2 (ENSHGLG00000005896)	TMEM91 (ENSHGLG00000036227)	EXOSC5 (ENSHGLG00000008975)	BCKDHA (ENSHGLG00000050952)	B3GNT8 (ENSHGLG00000010364)	ERICH4 (ENSHGLG00000048703)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C.t #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Marmotini	ANCESTRAL SPECIES	7	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C.t #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Marmotini_b	ANCESTRAL SPECIES	49	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C.t #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Squirrel	MODERN SPECIES	306	QPCTL (ENSSTOG00000013895)	SNRPD2 (ENSSTOG00000024377)	GIPR (ENSSTOG00000028727) #7	EML2 (ENSSTOG00000013316) #8	GPR4 (ENSSTOG00000022015) #9	OPA3 (ENSSTOG00000029170) #11	VASP (ENSSTOG00000027705) #12	PPM1N (ENSSTOG00000002827) #13	RTN2 (ENSSTOG00000002816) #14	FOSB (ENSSTOG00000028949) #15	ERCC1 (ENSSTOG00000002805) #17	POLR1G (ENSSTOG00000002799) #18	PPP1R13L (ENSSTOG00000001130) #19	ERCC2 (ENSSTOG00000001106) #20	KLC3 (ENSSTOG00000020494) #21	CKM (ENSSTOG00000011537) #22	MARK4 (ENSSTOG00000011531) #23	ENSSTOG00000011523 #24	TRAPPC6A (ENSSTOG00000009152)	BLOC1S3 (ENSSTOG00000033740) #25	NKPD1 (ENSSTOG00000027698) #26	PPP1R37 (ENSSTOG00000025282) #27	GEMIN7 (ENSSTOG00000033006) #28	ZNF296 (ENSSTOG00000023578) #29	CLASRP (ENSSTOG00000009069) #30	RELB (ENSSTOG00000009056) #31	ENSSTOG00000032770	CLPTM1 (ENSSTOG00000009031) #32	ENSSTOG00000009019 #37	NECTIN2 (ENSSTOG00000008997)	BCAM (ENSSTOG00000021794)
Arctic ground squirrel	MODERN SPECIES	297	QPCTL (ENSUPAG00010021602)	SNRPD2 (ENSUPAG00010021605)	GIPR (ENSUPAG00010021609) #7	EML2 (ENSUPAG00010021623) #8	GPR4 (ENSUPAG00010021640) #9	OPA3 (ENSUPAG00010021642) #11	VASP (ENSUPAG00010021647) #12	PPM1N (ENSUPAG00010021657) #13	RTN2 (ENSUPAG00010021664) #14	FOSB (ENSUPAG00010021666) #15	ERCC1 (ENSUPAG00010021686) #17	POLR1G (ENSUPAG00010021691) #18	PPP1R13L (ENSUPAG00010021693) #19	ERCC2 (ENSUPAG00010021698) #20	KLC3 (ENSUPAG00010021708) #21	CKM (ENSUPAG00010021720) #22	MARK4 (ENSUPAG00010021726) #23	EXOC3L2 (ENSUPAG00010021737) #24	BLOC1S3 (ENSUPAG00010021749) #25	TRAPPC6A (ENSUPAG00010021751)	NKPD1 (ENSUPAG00010021755) #26	PPP1R37 (ENSUPAG00010021758) #27	GEMIN7 (ENSUPAG00010021768) #28	ZNF296 (ENSUPAG00010021770) #29	CLASRP (ENSUPAG00010021771) #30	RELB (ENSUPAG00010021774) #31	CLPTM1 (ENSUPAG00010021781) #32	ENSUPAG00010021782 #33	ENSUPAG00010021784 #34	APOC1 (ENSUPAG00010021785) #35	APOE (ENSUPAG00010021788) #36
Alpin marmot	MODERN SPECIES	45	QPCTL (ENSMMMG00000014131)	ENSMMMG00000014144	GIPR (ENSMMMG00000014147) #7	EML2 (ENSMMMG00000014164) #8	GPR4 (ENSMMMG00000014230) #9	OPA3 (ENSMMMG00000014232) #11	VASP (ENSMMMG00000014235) #12	ENSMMMG00000014265 #13	RTN2 (ENSMMMG00000014268) #14	FOSB (ENSMMMG00000014298) #15	ERCC1 (ENSMMMG00000014315) #17	POLR1G (ENSMMMG00000014326) #18	ENSMMMG00000014331 #19	ERCC2 (ENSMMMG00000014338) #20	KLC3 (ENSMMMG00000014476) #21	CKM (ENSMMMG00000014494) #22	MARK4 (ENSMMMG00000014510) #23	ENSMMMG00000014559	BLOC1S3 (ENSMMMG00000014569) #25	TRAPPC6A (ENSMMMG00000014570)	PPP1R37 (ENSMMMG00000014623) #27	GEMIN7 (ENSMMMG00000014641) #28	ZNF296 (ENSMMMG00000014656) #29	CLASRP (ENSMMMG00000014675) #30	ENSMMMG00000014707 #31	CLPTM1 (ENSMMMG00000014731) #32	ENSMMMG00000014736 #33	APOC1 (ENSMMMG00000014747) #35	ENSMMMG00000014754	TOMM40 (ENSMMMG00000014766) #37	NECTIN2 (ENSMMMG00000014773)
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005023631	GIPR (ENSSVLG00005023358) #7	EML2 (ENSSVLG00005023025) #8	GPR4 (ENSSVLG00005022943) #9	OPA3 (ENSSVLG00005022913) #11	VASP (ENSSVLG00005022815) #12	PPM1N (ENSSVLG00005022665) #13	RTN2 (ENSSVLG00005022524) #14	FOSB (ENSSVLG00005022289) #15	ERCC1 (ENSSVLG00005022100) #17	POLR1G (ENSSVLG00005022037) #18	PPP1R13L (ENSSVLG00005021997) #19	ERCC2 (ENSSVLG00005021679) #20	KLC3 (ENSSVLG00005021449) #21	ENSSVLG00005021426	CKM (ENSSVLG00005021360) #22	ENSSVLG00005021273 #23	EXOC3L2 (ENSSVLG00005021070) #24	BLOC1S3 (ENSSVLG00005021043) #25	TRAPPC6A (ENSSVLG00005020976)	NKPD1 (ENSSVLG00005020950) #26	PPP1R37 (ENSSVLG00005020898) #27	GEMIN7 (ENSSVLG00005020878) #28	ZNF296 (ENSSVLG00005020812) #29	CLASRP (ENSSVLG00005020689) #30	RELB (ENSSVLG00005020581) #31	CLPTM1 (ENSSVLG00005020445) #32	APOC2 (ENSSVLG00005020338) #33	ENSSVLG00005020271 #34	ENSSVLG00005020178 #35	APOE (ENSSVLG00005020139) #36
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Muroidea	ANCESTRAL SPECIES	18	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Cricetidae	ANCESTRAL SPECIES	29	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Cricetinae	ANCESTRAL SPECIES	42	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Chinese hamster chok1gshd	MODERN SPECIES	328	Fbxo46 (ENSCGRG00001014313)	Qpctl (ENSCGRG00001000786)	Gipr (ENSCGRG00001000434) #7	Eml2 (ENSCGRG00001001692) #8	Gpr4 (ENSCGRG00001013541) #9	Opa3 (ENSCGRG00001016230) #11	Vasp (ENSCGRG00001008576) #12	Ppm1n (ENSCGRG00001001627) #13	Rtn2 (ENSCGRG00001023308) #14	Fosb (ENSCGRG00001009723) #15	Ercc1 (ENSCGRG00001000712) #17	Polr1g (ENSCGRG00001023584) #18	Ppp1r13l (ENSCGRG00001020832) #19	Ercc2 (ENSCGRG00001013953) #20	Klc3 (ENSCGRG00001022712) #21	Ckm (ENSCGRG00001017465) #22	Mark4 (ENSCGRG00001017090) #23	ENSCGRG00001015530	Bloc1s3 (ENSCGRG00001015521) #25	Trappc6a (ENSCGRG00001002017)	Nkpd1 (ENSCGRG00001019267) #26	Ppp1r37 (ENSCGRG00001000178) #27	Gemin7 (ENSCGRG00001013306) #28	Zfp296 (ENSCGRG00001015680) #29	Clasrp (ENSCGRG00001015861) #30	Relb (ENSCGRG00001007750) #31	Clptm1 (ENSCGRG00001010928) #32	Apoc2 (ENSCGRG00001005778) #33	Apoc4 (ENSCGRG00001017401) #34	Apoc1 (ENSCGRG00001017299) #35	Apoe (ENSCGRG00001017152) #36
Golden Hamster	MODERN SPECIES	834	Fbxo46 (ENSMAUG00000019697)	Qpctl (ENSMAUG00000014498)	Snrpd2 (ENSMAUG00000018849)	Gipr (ENSMAUG00000021032) #7	Eml2 (ENSMAUG00000016205) #8	Opa3 (ENSMAUG00000015768) #11	Vasp (ENSMAUG00000018921) #12	Ppm1n (ENSMAUG00000011353) #13	ENSMAUG00000018994 #14	Fosb (ENSMAUG00000000999) #15	Ercc1 (ENSMAUG00000014855) #17	Polr1g (ENSMAUG00000007876) #18	Ppp1r13l (ENSMAUG00000020292) #19	Ercc2 (ENSMAUG00000000724) #20	Klc3 (ENSMAUG00000017859) #21	Ckm (ENSMAUG00000009932) #22	ENSMAUG00000020514	Mark4 (ENSMAUG00000009989) #23	Exoc3l2 (ENSMAUG00000019204) #24	Bloc1s3 (ENSMAUG00000014366) #25	Trappc6a (ENSMAUG00000017280)	Nkpd1 (ENSMAUG00000006604) #26	Ppp1r37 (ENSMAUG00000008592) #27	Gemin7 (ENSMAUG00000018897) #28	Zfp296 (ENSMAUG00000019561) #29	Clasrp (ENSMAUG00000000378) #30	ENSMAUG00000017092 #31	Clptm1 (ENSMAUG00000004399) #32	Apoc2 (ENSMAUG00000014292) #33	Apoc4 (ENSMAUG00000019705) #34	Apoc1 (ENSMAUG00000020478) #35
Cricetidae_B	ANCESTRAL SPECIES	41	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Prairie vole	MODERN SPECIES	157	Qpctl (ENSMOCG00000015780)	Snrpd2 (ENSMOCG00000017080)	Gipr (ENSMOCG00000015992) #7	Eml2 (ENSMOCG00000013139) #8	Gpr4 (ENSMOCG00000001007) #9	Opa3 (ENSMOCG00000013947) #11	Vasp (ENSMOCG00000001451) #12	Ppm1n (ENSMOCG00000011572) #13	ENSMOCG00000018978 #14	Fosb (ENSMOCG00000001596) #15	Ercc1 (ENSMOCG00000012206) #17	Polr1g (ENSMOCG00000013766) #18	Ppp1r13l (ENSMOCG00000001158) #19	Ercc2 (ENSMOCG00000013611) #20	Klc3 (ENSMOCG00000003970) #21	Ckm (ENSMOCG00000020442) #22	Mark4 (ENSMOCG00000006161) #23	Exoc3l2 (ENSMOCG00000003076) #24	Bloc1s3 (ENSMOCG00000000204) #25	Trappc6a (ENSMOCG00000013206)	Nkpd1 (ENSMOCG00000000052) #26	Ppp1r37 (ENSMOCG00000009307) #27	Gemin7 (ENSMOCG00000019633) #28	Zfp296 (ENSMOCG00000000338) #29	Clasrp (ENSMOCG00000007548) #30	Relb (ENSMOCG00000003754) #31	Clptm1 (ENSMOCG00000015665) #32	Apoc2 (ENSMOCG00000010632) #33	Apoc4 (ENSMOCG00000015539) #34	Apoc1 (ENSMOCG00000010879) #35	Apoe (ENSMOCG00000001633) #36
Northern American deer mouse	MODERN SPECIES		Snrpd2 (ENSPEMG00000004117)	Gipr (ENSPEMG00000014106) #7	Eml2 (ENSPEMG00000008721) #8	Gpr4 (ENSPEMG00000000584) #9	Opa3 (ENSPEMG00000024608) #11	Vasp (ENSPEMG00000001352) #12	Ppm1n (ENSPEMG00000014264) #13	Rtn2 (ENSPEMG00000012056) #14	Fosb (ENSPEMG00000016150) #15	Ercc1 (ENSPEMG00000000638) #17	Polr1g (ENSPEMG00000018578) #18	Ppp1r13l (ENSPEMG00000007393) #19	Ercc2 (ENSPEMG00000008225) #20	Klc3 (ENSPEMG00000014005) #21	ENSPEMG00000019188	Ckm (ENSPEMG00000013369) #22	Mark4 (ENSPEMG00000013793) #23	Exoc3l2 (ENSPEMG00000016910) #24	Trappc6a (ENSPEMG00000018919)	Nkpd1 (ENSPEMG00000010558) #26	Ppp1r37 (ENSPEMG00000001005) #27	Gemin7 (ENSPEMG00000003653) #28	Zfp296 (ENSPEMG00000008067) #29	Clasrp (ENSPEMG00000017845) #30	Relb (ENSPEMG00000017792) #31	Clptm1 (ENSPEMG00000000759) #32	Apoc2 (ENSPEMG00000017266) #33	Apoc4 (ENSPEMG00000008327) #34	ENSPEMG00000010767	Apoe (ENSPEMG00000011447) #36	Tomm40 (ENSPEMG00000018119) #37
Murinae	ANCESTRAL SPECIES	19	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Mus	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Mus_A	ANCESTRAL SPECIES	1	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Mus_B	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Mouse	MODERN SPECIES	16	Qpctl (ENSMUSG00000030407)	Snrpd2 (ENSMUSG00000040824)	Gipr (ENSMUSG00000030406) #7	Eml2 (ENSMUSG00000040811) #8	Gpr4 (ENSMUSG00000044317) #9	Opa3 (ENSMUSG00000052214) #11	Vasp (ENSMUSG00000030403) #12	Ppm1n (ENSMUSG00000030402) #13	Rtn2 (ENSMUSG00000030401) #14	Fosb (ENSMUSG00000003545) #15	Ercc1 (ENSMUSG00000003549) #17	Polr1g (ENSMUSG00000047649) #18	Ppp1r13l (ENSMUSG00000040734) #19	Ercc2 (ENSMUSG00000030400) #20	Klc3 (ENSMUSG00000040714) #21	Ckm (ENSMUSG00000030399) #22	Mark4 (ENSMUSG00000030397) #23	Exoc3l2 (ENSMUSG00000011263) #24	Bloc1s3 (ENSMUSG00000057667) #25	Trappc6a (ENSMUSG00000002043)	Nkpd1 (ENSMUSG00000060621) #26	Ppp1r37 (ENSMUSG00000051403) #27	Gemin7 (ENSMUSG00000044709) #28	Zfp296 (ENSMUSG00000011267) #29	Clasrp (ENSMUSG00000061028) #30	Relb (ENSMUSG00000002983) #31	Clptm1 (ENSMUSG00000002981) #32	Apoc2 (ENSMUSG00000002992) #33	Apoc2l (ENSMUSG00000109350)	Apoc4 (ENSMUSG00000074336) #34	Apoc1 (ENSMUSG00000040564) #35
Mus_C	ANCESTRAL SPECIES	15	ENSGT00390000003107.b	ENSGT00390000017608.b.qb	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
spretus	MODERN SPECIES	16	Qpctl (MGP_SPRETEiJ_G0030358)	MGP_SPRETEiJ_G0030359	Gipr (MGP_SPRETEiJ_G0030360) #7	Eml2 (MGP_SPRETEiJ_G0030361) #8	Gpr4 (MGP_SPRETEiJ_G0030362) #9	Opa3 (MGP_SPRETEiJ_G0030363) #11	Vasp (MGP_SPRETEiJ_G0030364) #12	Ppm1n (MGP_SPRETEiJ_G0030365) #13	Rtn2 (MGP_SPRETEiJ_G0030366) #14	Fosb (MGP_SPRETEiJ_G0030367) #15	Ercc1 (MGP_SPRETEiJ_G0030368) #17	Polr1g (MGP_SPRETEiJ_G0030369) #18	Ppp1r13l (MGP_SPRETEiJ_G0030370) #19	Ercc2 (MGP_SPRETEiJ_G0030371) #20	Klc3 (MGP_SPRETEiJ_G0030372) #21	Ckm (MGP_SPRETEiJ_G0030373) #22	MGP_SPRETEiJ_G0030374	Mark4 (MGP_SPRETEiJ_G0030375) #23	Exoc3l2 (MGP_SPRETEiJ_G0030376) #24	Bloc1s3 (MGP_SPRETEiJ_G0030377) #25	Trappc6a (MGP_SPRETEiJ_G0030378)	Nkpd1 (MGP_SPRETEiJ_G0030379) #26	Ppp1r37 (MGP_SPRETEiJ_G0030380) #27	Gemin7 (MGP_SPRETEiJ_G0030381) #28	Zfp296 (MGP_SPRETEiJ_G0030382) #29	Clasrp (MGP_SPRETEiJ_G0030383) #30	Relb (MGP_SPRETEiJ_G0030384) #31	Clptm1 (MGP_SPRETEiJ_G0030385) #32	Apoc2 (MGP_SPRETEiJ_G0030386) #33	Apoc4 (MGP_SPRETEiJ_G0030387) #34	Apoc1 (MGP_SPRETEiJ_G0030388) #35
Steppe mouse	MODERN SPECIES	2900	Qpctl (ENSMSIG00000005068)	Snrpd2 (ENSMSIG00000005096)	Gipr (ENSMSIG00000005108) #7	Eml2 (ENSMSIG00000005175) #8	Gpr4 (ENSMSIG00000005462) #9	Opa3 (ENSMSIG00000005466) #11	Vasp (ENSMSIG00000005496) #12	Ppm1n (ENSMSIG00000005528) #13	Rtn2 (ENSMSIG00000005554) #14	Fosb (ENSMSIG00000005600) #15	Ercc1 (ENSMSIG00000005763) #17	Polr1g (ENSMSIG00000005787) #18	Ppp1r13l (ENSMSIG00000005801) #19	Ercc2 (ENSMSIG00000005841) #20	Klc3 (ENSMSIG00000006063) #21	Ckm (ENSMSIG00000006180) #22	Mark4 (ENSMSIG00000006221) #23	Exoc3l2 (ENSMSIG00000006372) #24	Bloc1s3 (ENSMSIG00000006464) #25	ENSMSIG00000006473	Nkpd1 (ENSMSIG00000006532) #26	Ppp1r37 (ENSMSIG00000006586) #27	Gemin7 (ENSMSIG00000006656) #28	Zfp296 (ENSMSIG00000006673) #29	Clasrp (ENSMSIG00000006696) #30	Relb (ENSMSIG00000006878) #31	Clptm1 (ENSMSIG00000007105) #32	Apoc2 (ENSMSIG00000007132) #33	Apoc4 (ENSMSIG00000007155) #34	Apoc1 (ENSMSIG00000007168) #35	Apoe (ENSMSIG00000007187) #36
Ryukyu mouse	MODERN SPECIES	16	Qpctl (MGP_CAROLIEiJ_G0029274)	Snrpd2 (MGP_CAROLIEiJ_G0029275)	Gipr (MGP_CAROLIEiJ_G0029276) #7	Eml2 (MGP_CAROLIEiJ_G0029277) #8	Gpr4 (MGP_CAROLIEiJ_G0029278) #9	Opa3 (MGP_CAROLIEiJ_G0029279) #11	Vasp (MGP_CAROLIEiJ_G0029280) #12	Ppm1n (MGP_CAROLIEiJ_G0029281) #13	Rtn2 (MGP_CAROLIEiJ_G0029282) #14	Fosb (MGP_CAROLIEiJ_G0029283) #15	Ercc1 (MGP_CAROLIEiJ_G0029284) #17	Polr1g (MGP_CAROLIEiJ_G0029285) #18	Ppp1r13l (MGP_CAROLIEiJ_G0029286) #19	Ercc2 (MGP_CAROLIEiJ_G0029287) #20	Klc3 (MGP_CAROLIEiJ_G0029288) #21	Ckm (MGP_CAROLIEiJ_G0029289) #22	MGP_CAROLIEiJ_G0029290	Mark4 (MGP_CAROLIEiJ_G0029291) #23	Exoc3l2 (MGP_CAROLIEiJ_G0029292) #24	Bloc1s3 (MGP_CAROLIEiJ_G0029293) #25	MGP_CAROLIEiJ_G0029294	Nkpd1 (MGP_CAROLIEiJ_G0029295) #26	Ppp1r37 (MGP_CAROLIEiJ_G0029296) #27	Gemin7 (MGP_CAROLIEiJ_G0029297) #28	Zfp296 (MGP_CAROLIEiJ_G0029298) #29	Clasrp (MGP_CAROLIEiJ_G0029299) #30	Relb (MGP_CAROLIEiJ_G0029300) #31	Clptm1 (MGP_CAROLIEiJ_G0029301) #32	Apoc2 (MGP_CAROLIEiJ_G0029302) #33	Apoc4 (MGP_CAROLIEiJ_G0029303) #34	Apoc1 (MGP_CAROLIEiJ_G0029304) #35
Shrew mouse	MODERN SPECIES	10	Fbxo46 (MGP_PahariEiJ_G0021133)	Qpctl (MGP_PahariEiJ_G0021134)	Snrpd2 (MGP_PahariEiJ_G0021135)	Gipr (MGP_PahariEiJ_G0021136) #7	Eml2 (MGP_PahariEiJ_G0021137) #8	Gpr4 (MGP_PahariEiJ_G0021138) #9	Opa3 (MGP_PahariEiJ_G0021139) #11	Vasp (MGP_PahariEiJ_G0021140) #12	Ppm1n (MGP_PahariEiJ_G0021141) #13	Rtn2 (MGP_PahariEiJ_G0021142) #14	Fosb (MGP_PahariEiJ_G0021143) #15	Ercc1 (MGP_PahariEiJ_G0021144) #17	Ppp1r13l (MGP_PahariEiJ_G0021146) #19	Ercc2 (MGP_PahariEiJ_G0021147) #20	Klc3 (MGP_PahariEiJ_G0021148) #21	Ckm (MGP_PahariEiJ_G0021149) #22	MGP_PahariEiJ_G0021150	Mark4 (MGP_PahariEiJ_G0021151) #23	Exoc3l2 (MGP_PahariEiJ_G0021152) #24	Bloc1s3 (MGP_PahariEiJ_G0021153) #25	MGP_PahariEiJ_G0021154	Nkpd1 (MGP_PahariEiJ_G0021155) #26	Ppp1r37 (MGP_PahariEiJ_G0021156) #27	Gemin7 (MGP_PahariEiJ_G0021157) #28	Zfp296 (MGP_PahariEiJ_G0021158) #29	Clasrp (MGP_PahariEiJ_G0021159) #30	Relb (MGP_PahariEiJ_G0021160) #31	Clptm1 (MGP_PahariEiJ_G0021161) #32	MGP_PahariEiJ_G0021162 #33	Apoc4 (MGP_PahariEiJ_G0021163) #34	Apoc1 (MGP_PahariEiJ_G0021164) #35
Rat	MODERN SPECIES		Snrpd2 (ENSRNOG00000015844)	Gipr (ENSRNOG00000015860) #7	Eml2 (ENSRNOG00000030127) #8	Gpr4 (ENSRNOG00000016362) #9	Opa3 (ENSRNOG00000025890)	Opa3 (ENSRNOG00000064373) #11	Vasp (ENSRNOG00000016367) #12	Ppm1n (ENSRNOG00000058133) #13	Rtn2 (ENSRNOG00000016603) #14	Fosb (ENSRNOG00000046667) #15	Ercc1 (ENSRNOG00000017839) #17	Polr1g (ENSRNOG00000016825) #18	Ppp1r13l (ENSRNOG00000025350) #19	Ercc2 (ENSRNOG00000017753) #20	Klc3 (ENSRNOG00000018101) #21	Ckm (ENSRNOG00000016837) #22	Mark4 (ENSRNOG00000017069) #23	Exoc3l2 (ENSRNOG00000017448) #24	Bloc1s3 (ENSRNOG00000017463) #25	Trappc6a (ENSRNOG00000017468)	Nkpd1 (ENSRNOG00000043378) #26	Ppp1r37 (ENSRNOG00000017692) #27	Gemin7 (ENSRNOG00000049772) #28	Zfp296 (ENSRNOG00000049605) #29	Clasrp (ENSRNOG00000046000) #30	Relb (ENSRNOG00000033235) #31	Clptm1 (ENSRNOG00000018255) #32	Apoc2 (ENSRNOG00000018402) #33	Apoc4 (ENSRNOG00000018405) #34	Apoc1 (ENSRNOG00000018426)	Apoe (ENSRNOG00000018454) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1616	Fbxo46 (ENSNGAG00000017717)	Qpctl (ENSNGAG00000012368)	ENSNGAG00000010411	Gipr (ENSNGAG00000014088) #7	Eml2 (ENSNGAG00000016674) #8	Gpr4 (ENSNGAG00000009194) #9	Opa3 (ENSNGAG00000015660) #11	Vasp (ENSNGAG00000012981) #12	Rtn2 (ENSNGAG00000001176) #14	Fosb (ENSNGAG00000020712) #15	Ercc1 (ENSNGAG00000018219) #17	Polr1g (ENSNGAG00000015313) #18	Ppp1r13l (ENSNGAG00000000621) #19	Ercc2 (ENSNGAG00000017688) #20	Klc3 (ENSNGAG00000007710) #21	Ckm (ENSNGAG00000000066) #22	Mark4 (ENSNGAG00000012653) #23	Exoc3l2 (ENSNGAG00000020966) #24	Bloc1s3 (ENSNGAG00000013200) #25	Trappc6a (ENSNGAG00000018159)	Nkpd1 (ENSNGAG00000015014) #26	Ppp1r37 (ENSNGAG00000010843) #27	Gemin7 (ENSNGAG00000018443) #28	Zfp296 (ENSNGAG00000010996) #29	Clasrp (ENSNGAG00000016249) #30	ENSNGAG00000012950 #31	Clptm1 (ENSNGAG00000003363) #32	ENSNGAG00000000307	Apoc2 (ENSNGAG00000019759) #33	Apoc4 (ENSNGAG00000015603) #34	Apoc1 (ENSNGAG00000019714) #35
Lesser Egyptian jerboa	MODERN SPECIES	186	Apoc2 (ENSJJAG00000017546) #33	Clptm1 (ENSJJAG00000017147) #32	Relb (ENSJJAG00000016298) #31	ENSJJAG00000016124 #30	Zfp296 (ENSJJAG00000015875) #29	Ppp1r37 (ENSJJAG00000015339) #27	ENSJJAG00000014876	Nkpd1 (ENSJJAG00000014468) #26	ENSJJAG00000014225	Fosb (ENSJJAG00000013651) #15	ENSJJAG00000013425	Polr1g (ENSJJAG00000013173) #18	Ppp1r13l (ENSJJAG00000011946) #19	Ercc2 (ENSJJAG00000006595) #20	Klc3 (ENSJJAG00000022201) #21	Ckm (ENSJJAG00000021725) #22	Mark4 (ENSJJAG00000021555) #23
Kangaroo rat	MODERN SPECIES	475	Six5 (ENSDORG00000026570)	Fbxo46 (ENSDORG00000029689)	Qpctl (ENSDORG00000001733)	Gipr (ENSDORG00000001717) #7	Eml2 (ENSDORG00000008122) #8	Opa3 (ENSDORG00000024215) #11	Vasp (ENSDORG00000008121) #12	Ppm1n (ENSDORG00000008119) #13	Rtn2 (ENSDORG00000008114) #14	Fosb (ENSDORG00000008112) #15	Ercc1 (ENSDORG00000007999) #17	ENSDORG00000027052 #18	Ppp1r13l (ENSDORG00000008001) #19	Ercc2 (ENSDORG00000008002) #20	Klc3 (ENSDORG00000008004) #21	Ckm (ENSDORG00000013288) #22	ENSDORG00000023785	Mark4 (ENSDORG00000013282) #23	Exoc3l2 (ENSDORG00000009068) #24	Trappc6a (ENSDORG00000003457)	Nkpd1 (ENSDORG00000027401) #26	Ppp1r37 (ENSDORG00000003452) #27	Zfp296 (ENSDORG00000003451) #29	Clasrp (ENSDORG00000003450) #30	Gemin7 (ENSDORG00000027339) #28	Relb (ENSDORG00000003448) #31	Clptm1 (ENSDORG00000003446) #32	Apoc2 (ENSDORG00000027051) #33	Apoc4 (ENSDORG00000016144) #34	Apoc1 (ENSDORG00000003582) #35	Apoe (ENSDORG00000003581) #36
Lagomorpha	ANCESTRAL SPECIES	178		ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00980000200098	ENSGT00450000040362 #18	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Rabbit	MODERN SPECIES	736			QPCTL (ENSOCUG00000016066)	SNRPD2 (ENSOCUG00000022402)	GIPR (ENSOCUG00000011885) #7	EML2 (ENSOCUG00000021801) #8	GPR4 (ENSOCUG00000037302) #9	OPA3 (ENSOCUG00000007949) #11	ENSOCUG00000026899 #12	PPM1N (ENSOCUG00000024100) #13	RTN2 (ENSOCUG00000023342) #14	FOSB (ENSOCUG00000023019) #15	ENSOCUG00000024047	ENSOCUG00000025376 #18	ERCC2 (ENSOCUG00000025269) #20	CKM (ENSOCUG00000027154) #22	ENSOCUG00000024723 #23
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Suina	ANCESTRAL SPECIES	2	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36
Pig	MODERN SPECIES	14	QPCTL (ENSSSCG00000032819)	SNRPD2 (ENSSSCG00000033500)	GIPR (ENSSSCG00000021053) #7	EML2 (ENSSSCG00000038229) #8	GPR4 (ENSSSCG00000037184) #9	OPA3 (ENSSSCG00000058475) #11	VASP (ENSSSCG00000036317) #12	PPM1N (ENSSSCG00000037001) #13	RTN2 (ENSSSCG00000036870) #14	FOSB (ENSSSCG00000031616) #15	ERCC1 (ENSSSCG00000055289) #17	POLR1G (ENSSSCG00000020754) #18	PPP1R13L (ENSSSCG00000036542) #19	ERCC2 (ENSSSCG00000039929) #20	KLC3 (ENSSSCG00000039864) #21	CKM (ENSSSCG00000036132) #22	MARK4 (ENSSSCG00000022538) #23	EXOC3L2 (ENSSSCG00000040410) #24	ENSSSCG00000035706	TRAPPC6A (ENSSSCG00000035374)	NKPD1 (ENSSSCG00000035833) #26	PPP1R37 (ENSSSCG00000037056) #27	GEMIN7 (ENSSSCG00000033194) #28	ENSSSCG00000031166 #29	CLASRP (ENSSSCG00000040264) #30	RELB (ENSSSCG00000038879) #31	CLPTM1 (ENSSSCG00000003085) #32	ENSSSCG00000003086 #33	APOC4 (ENSSSCG00000058983) #34	APOE (ENSSSCG00000003088) #36	TOMM40 (ENSSSCG00000003089) #37
Chacoan peccary	MODERN SPECIES	799	QPCTL (ENSCWAG00000007680)	SNRPD2 (ENSCWAG00000007655)	GIPR (ENSCWAG00000007383) #7	EML2 (ENSCWAG00000006972) #8	GPR4 (ENSCWAG00000006910) #9	OPA3 (ENSCWAG00000006875) #11	VASP (ENSCWAG00000006847) #12	PPM1N (ENSCWAG00000006758) #13	RTN2 (ENSCWAG00000006684) #14	FOSB (ENSCWAG00000006321) #15	ERCC1 (ENSCWAG00000006073) #17	POLR1G (ENSCWAG00000006042) #18	PPP1R13L (ENSCWAG00000007629) #19	ERCC2 (ENSCWAG00000007442) #20	KLC3 (ENSCWAG00000007378) #21	CKM (ENSCWAG00000007339) #22	MARK4 (ENSCWAG00000007300) #23	EXOC3L2 (ENSCWAG00000007215) #24	ENSCWAG00000007136	BLOC1S3 (ENSCWAG00000007112) #25	TRAPPC6A (ENSCWAG00000007010)	NKPD1 (ENSCWAG00000006981) #26	PPP1R37 (ENSCWAG00000006951) #27	GEMIN7 (ENSCWAG00000006937) #28	ZNF296 (ENSCWAG00000006900) #29	CLASRP (ENSCWAG00000006711) #30	RELB (ENSCWAG00000006535) #31	CLPTM1 (ENSCWAG00000006437) #32	APOC2 (ENSCWAG00000006393) #33	ENSCWAG00000006373 #34	APOE (ENSCWAG00000006358) #36
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Camelidae	ANCESTRAL SPECIES	15	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000012948.a	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37	ENSGT00940000161167
Alpaca	MODERN SPECIES	3363																ENSVPAG00000011152 #22
Arabian camel	MODERN SPECIES	35	QPCTL (ENSCDRG00005009916)	SNRPD2 (ENSCDRG00005009839)	GIPR (ENSCDRG00005009575) #7	EML2 (ENSCDRG00005008817) #8	GPR4 (ENSCDRG00005008750) #9	OPA3 (ENSCDRG00005008699) #11	VASP (ENSCDRG00005008655) #12	ENSCDRG00005008614 #13	RTN2 (ENSCDRG00005008404) #14	FOSB (ENSCDRG00005008193) #15	ERCC1 (ENSCDRG00005007850) #17	POLR1G (ENSCDRG00005007827) #18	PPP1R13L (ENSCDRG00005007577) #19	ERCC2 (ENSCDRG00005007441) #20	KLC3 (ENSCDRG00005007396) #21	CKM (ENSCDRG00005007135) #22	MARK4 (ENSCDRG00005007201) #23	ENSCDRG00005007088 #24	ENSCDRG00005007044	TRAPPC6A (ENSCDRG00005006907)	PPP1R37 (ENSCDRG00005006789) #27	GEMIN7 (ENSCDRG00005006771) #28	ZNF296 (ENSCDRG00005006724) #29	CLASRP (ENSCDRG00005006557) #30	RELB (ENSCDRG00005006405) #31	CLPTM1 (ENSCDRG00005006349) #32	APOC2 (ENSCDRG00005006292) #33	APOC4 (ENSCDRG00005006257) #34	ENSCDRG00005006242	APOE (ENSCDRG00005006223) #36	ENSCDRG00005006192 #37
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000017608.b.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000235762	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000017608.b.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000235762	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000017608.b.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000235762	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000017608.b.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000235762	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000017608.b.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000235762	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Narwhal	MODERN SPECIES	296	ENSMMNG00015007488	GIPR (ENSMMNG00015007342) #7	EML2 (ENSMMNG00015007133) #8	GPR4 (ENSMMNG00015007074) #9	OPA3 (ENSMMNG00015007066) #11	VASP (ENSMMNG00015007042) #12	PPM1N (ENSMMNG00015007023) #13	RTN2 (ENSMMNG00015006960) #14	FOSB (ENSMMNG00015006909) #15	ERCC1 (ENSMMNG00015006840) #17	POLR1G (ENSMMNG00015006785) #18	PPP1R13L (ENSMMNG00015006754) #19	ERCC2 (ENSMMNG00015006706) #20	KLC3 (ENSMMNG00015006659) #21	ENSMMNG00015006648	CKM (ENSMMNG00015006634) #22	MARK4 (ENSMMNG00015006596) #23	EXOC3L2 (ENSMMNG00015006566) #24	BLOC1S3 (ENSMMNG00015006548) #25	TRAPPC6A (ENSMMNG00015006532)	NKPD1 (ENSMMNG00015006511) #26	PPP1R37 (ENSMMNG00015006472) #27	GEMIN7 (ENSMMNG00015006455) #28	ZNF296 (ENSMMNG00015006446) #29	CLASRP (ENSMMNG00015006402) #30	RELB (ENSMMNG00015006315) #31	CLPTM1 (ENSMMNG00015006240) #32	APOC2 (ENSMMNG00015006207) #33	ENSMMNG00015006191 #34	APOE (ENSMMNG00015006181) #36	TOMM40 (ENSMMNG00015006165) #37
Beluga whale	MODERN SPECIES	14	QPCTL (ENSDLEG00000000148)	SNRPD2 (ENSDLEG00000000188)	GIPR (ENSDLEG00000000221) #7	EML2 (ENSDLEG00000000275) #8	OPA3 (ENSDLEG00000000472) #11	VASP (ENSDLEG00000000495) #12	ENSDLEG00000000541 #13	RTN2 (ENSDLEG00000000550) #14	FOSB (ENSDLEG00000000573) #15	ERCC1 (ENSDLEG00000000601) #17	CD3EAP (ENSDLEG00000000625) #18	PPP1R13L (ENSDLEG00000000687) #19	ERCC2 (ENSDLEG00000000789) #20	KLC3 (ENSDLEG00000000859) #21	ENSDLEG00000000880	CKM (ENSDLEG00000000888) #22	MARK4 (ENSDLEG00000000908) #23	EXOC3L2 (ENSDLEG00000000960) #24	BLOC1S3 (ENSDLEG00000000976) #25	TRAPPC6A (ENSDLEG00000000994)	NKPD1 (ENSDLEG00000001026) #26	PPP1R37 (ENSDLEG00000001075) #27	GEMIN7 (ENSDLEG00000001187) #28	ZNF296 (ENSDLEG00000001191) #29	CLASRP (ENSDLEG00000001206) #30	RELB (ENSDLEG00000001259) #31	CLPTM1 (ENSDLEG00000001367) #32	APOC2 (ENSDLEG00000001379) #33	ENSDLEG00000001388 #34	APOE (ENSDLEG00000001401) #36	TOMM40 (ENSDLEG00000001411) #37
Vaquita	MODERN SPECIES	10	ENSPSNG00000007055	GIPR (ENSPSNG00000007181) #7	EML2 (ENSPSNG00000007601) #8	GPR4 (ENSPSNG00000007964) #9	OPA3 (ENSPSNG00000007984) #11	VASP (ENSPSNG00000008004) #12	PPM1N (ENSPSNG00000008040) #13	RTN2 (ENSPSNG00000008107) #14	FOSB (ENSPSNG00000008236) #15	ERCC1 (ENSPSNG00000008412) #17	POLR1G (ENSPSNG00000008629) #18	PPP1R13L (ENSPSNG00000008669) #19	ERCC2 (ENSPSNG00000008714) #20	KLC3 (ENSPSNG00000008893) #21	ENSPSNG00000009068	CKM (ENSPSNG00000009085) #22	MARK4 (ENSPSNG00000009176) #23	EXOC3L2 (ENSPSNG00000009277) #24	ENSPSNG00000009335	TRAPPC6A (ENSPSNG00000009421)	NKPD1 (ENSPSNG00000009471) #26	PPP1R37 (ENSPSNG00000009509) #27	GEMIN7 (ENSPSNG00000009616) #28	ZNF296 (ENSPSNG00000009665) #29	CLASRP (ENSPSNG00000009802) #30	RELB (ENSPSNG00000009978) #31	CLPTM1 (ENSPSNG00000010345) #32	APOC2 (ENSPSNG00000010569) #33	ENSPSNG00000010685 #34	APOE (ENSPSNG00000010763) #36	TOMM40 (ENSPSNG00000010804) #37
Dolphin	MODERN SPECIES	2445							VASP (ENSTTRG00000008328) #12	ENSTTRG00000008327 #13	RTN2 (ENSTTRG00000008318) #14	FOSB (ENSTTRG00000008316) #15	ERCC1 (ENSTTRG00000008312) #17	POLR1G (ENSTTRG00000008311) #18	PPP1R13L (ENSTTRG00000008306) #19	ERCC2 (ENSTTRG00000008297) #20	KLC3 (ENSTTRG00000008289) #21	CKM (ENSTTRG00000008283) #22	MARK4 (ENSTTRG00000008272) #23
Sperm whale	MODERN SPECIES	42						ENSPCTG00005017393 #12	PPM1N (ENSPCTG00005017474) #13	RTN2 (ENSPCTG00005017793) #14	FOSB (ENSPCTG00005017925) #15	ERCC1 (ENSPCTG00005018106) #17	CD3EAP (ENSPCTG00005018334) #18	PPP1R13L (ENSPCTG00005018378) #19	ERCC2 (ENSPCTG00005018423) #20	KLC3 (ENSPCTG00005018519) #21	ENSPCTG00005018762	CK (ENSPCTG00005018779) #22	MARK4 (ENSPCTG00005018813) #23
Blue whale	MODERN SPECIES	10	SNRPD2 (ENSBMSG00010014687)	GIPR (ENSBMSG00010014763) #7	EML2 (ENSBMSG00010015025) #8	GPR4 (ENSBMSG00010015297) #9	OPA3 (ENSBMSG00010015309) #11	VASP (ENSBMSG00010015338) #12	PPM1N (ENSBMSG00010015387) #13	RTN2 (ENSBMSG00010015497) #14	FOSB (ENSBMSG00010015683) #15	ERCC1 (ENSBMSG00010015851) #17	POLR1G (ENSBMSG00010015986) #18	PPP1R13L (ENSBMSG00010016007) #19	ERCC2 (ENSBMSG00010016132) #20	KLC3 (ENSBMSG00010016396) #21	ENSBMSG00010016434	CKM (ENSBMSG00010016453) #22	MARK4 (ENSBMSG00010016517) #23	EXOC3L2 (ENSBMSG00010016591) #24	BLOC1S3 (ENSBMSG00010016676) #25	TRAPPC6A (ENSBMSG00010016722)	NKPD1 (ENSBMSG00010016786) #26	PPP1R37 (ENSBMSG00010016804) #27	GEMIN7 (ENSBMSG00010016828) #28	ZNF296 (ENSBMSG00010016843) #29	CLASRP (ENSBMSG00010016903) #30	RELB (ENSBMSG00010016973) #31	CLPTM1 (ENSBMSG00010017164) #32	APOC2 (ENSBMSG00010017237) #33	ENSBMSG00010017290 #34	APOE (ENSBMSG00010017333) #36	TOMM40 (ENSBMSG00010017365) #37
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Yarkand deer	MODERN SPECIES	27	SNRPD2 (ENSCHYG00000011477)	GIPR (ENSCHYG00000011385) #7	EML2 (ENSCHYG00000010342) #8	GPR4 (ENSCHYG00000010273) #9	ENSCHYG00000010242	OPA3 (ENSCHYG00000010190) #11	VASP (ENSCHYG00000009950) #12	PPM1N (ENSCHYG00000009858) #13	RTN2 (ENSCHYG00000009668) #14	FOSB (ENSCHYG00000009403) #15	ERCC1 (ENSCHYG00000008940) #17	POLR1G (ENSCHYG00000008868) #18	PPP1R13L (ENSCHYG00000003620) #19	ERCC2 (ENSCHYG00000003567) #20	KLC3 (ENSCHYG00000003518) #21	CKM (ENSCHYG00000003484) #22	MARK4 (ENSCHYG00000003252) #23	ENSCHYG00000003176 #24	ENSCHYG00000003168	ENSCHYG00000003146	BLOC1S3 (ENSCHYG00000003138) #25	TRAPPC6A (ENSCHYG00000003117)	NKPD1 (ENSCHYG00000003100) #26	PPP1R37 (ENSCHYG00000003054) #27	GEMIN7 (ENSCHYG00000003032) #28	ZNF296 (ENSCHYG00000003020) #29	CLASRP (ENSCHYG00000002995) #30	RELB (ENSCHYG00000002941) #31	ENSCHYG00000002909 #33	ENSCHYG00000002894 #34	APOE (ENSCHYG00000002871) #36
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Siberian musk deer	MODERN SPECIES	124	GIPR (ENSMMSG00000002994) #7	EML2 (ENSMMSG00000003108) #8	GPR4 (ENSMMSG00000003234) #9	OPA3 (ENSMMSG00000003240) #11	ENSMMSG00000003249	VASP (ENSMMSG00000003264) #12	ENSMMSG00000003279 #13	ENSMMSG00000003289 #13	RTN2 (ENSMMSG00000003303) #14	FOSB (ENSMMSG00000003347) #15	ERCC1 (ENSMMSG00000003423) #17	POLR1G (ENSMMSG00000003491) #18	PPP1R13L (ENSMMSG00000003509) #19	ERCC2 (ENSMMSG00000003542) #20	KLC3 (ENSMMSG00000003590) #21	CKM (ENSMMSG00000003622) #22	MARK4 (ENSMMSG00000003654) #23	EXOC3L2 (ENSMMSG00000003701) #24	ENSMMSG00000003741	ENSMMSG00000003778	BLOC1S3 (ENSMMSG00000003789) #25	TRAPPC6A (ENSMMSG00000014337)	NKPD1 (ENSMMSG00000014391) #26	PPP1R37 (ENSMMSG00000014402) #27	GEMIN7 (ENSMMSG00000014420) #28	ZNF296 (ENSMMSG00000014434) #29	CLASRP (ENSMMSG00000014455) #30	RELB (ENSMMSG00000014533) #31	CLPTM1 (ENSMMSG00000014687) #32	APOC2 (ENSMMSG00000014744) #33	ENSMMSG00000014768 #34
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36
Rambouillet Sheep	MODERN SPECIES	5	SNRPD2 (ENSOARG00020011522)	GIPR (ENSOARG00020010483) #7	EML2 (ENSOARG00020009160) #8	GPR4 (ENSOARG00020009088) #9	OPA3 (ENSOARG00020009064) #11	VASP (ENSOARG00020009004) #12	PPM1N (ENSOARG00020008873) #13	RTN2 (ENSOARG00020008656) #14	FOSB (ENSOARG00020008243) #15	ERCC1 (ENSOARG00020007969) #17	POLR1G (ENSOARG00020007892) #18	PPP1R13L (ENSOARG00020007840) #19	ENSOARG00020007820	ERCC2 (ENSOARG00020007166) #20	KLC3 (ENSOARG00020006917) #21	CKM (ENSOARG00020006864) #22	MARK4 (ENSOARG00020006366) #23	EXOC3L2 (ENSOARG00020006236) #24	ENSOARG00020006214	ENSOARG00020006186	ENSOARG00020006173	BLOC1S3 (ENSOARG00020006168) #25	TRAPPC6A (ENSOARG00020006142)	NKPD1 (ENSOARG00020006130) #26	PPP1R37 (ENSOARG00020006113) #27	GEMIN7 (ENSOARG00020006101) #28	ZNF296 (ENSOARG00020006063) #29	CLASRP (ENSOARG00020005970) #30	RELB (ENSOARG00020005934) #31	CLPTM1 (ENSOARG00020005849) #32	APOC2 (ENSOARG00020005819) #33
Goat	MODERN SPECIES	9	ENSCHIG00000015755	GIPR (ENSCHIG00000020718) #7	EML2 (ENSCHIG00000013582) #8	GPR4 (ENSCHIG00000005655) #9	ENSCHIG00000010098	OPA3 (ENSCHIG00000017112) #11	VASP (ENSCHIG00000012132) #12	PPM1N (ENSCHIG00000021371) #13	RTN2 (ENSCHIG00000014657) #14	FOSB (ENSCHIG00000003296) #15	POLR1G (ENSCHIG00000022038) #18	ERCC1 (ENSCHIG00000025635) #17	PPP1R13L (ENSCHIG00000025842) #19	ERCC2 (ENSCHIG00000022980) #20	KLC3 (ENSCHIG00000026294) #21	CKM (ENSCHIG00000024701) #22	MARK4 (ENSCHIG00000020349) #23	EXOC3L2 (ENSCHIG00000009277) #24	ENSCHIG00000023872	BLOC1S3 (ENSCHIG00000012308) #25	TRAPPC6A (ENSCHIG00000001236)	NKPD1 (ENSCHIG00000024854) #26	PPP1R37 (ENSCHIG00000026154) #27	GEMIN7 (ENSCHIG00000010022) #28	ZNF296 (ENSCHIG00000002342) #29	CLASRP (ENSCHIG00000024252) #30	RELB (ENSCHIG00000012617) #31	CLPTM1 (ENSCHIG00000005999) #32	APOC2 (ENSCHIG00000016235) #33	ENSCHIG00000023824 #34	ENSCHIG00000009240
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00960000187132	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33
American bison	MODERN SPECIES	3227	QPCTL (ENSBBBG00000000961)	SNRPD2 (ENSBBBG00000000935)	GIPR (ENSBBBG00000000834) #7	EML2 (ENSBBBG00000014978) #8	GPR4 (ENSBBBG00000003575) #9	OPA3 (ENSBBBG00000003720) #11	VASP (ENSBBBG00000015011) #12	PPM1N (ENSBBBG00000015044) #13	RTN2 (ENSBBBG00000003740) #14	FOSB (ENSBBBG00000003755) #15	ERCC1 (ENSBBBG00000015250) #17	POLR1G (ENSBBBG00000015276) #18	PPP1R13L (ENSBBBG00000015318) #19	ERCC2 (ENSBBBG00000001271) #20	KLC3 (ENSBBBG00000003490) #21	CKM (ENSBBBG00000003808) #22	MARK4 (ENSBBBG00000015357) #23	EXOC3L2 (ENSBBBG00000001245) #24	ENSBBBG00000015410	ENSBBBG00000015413	BLOC1S3 (ENSBBBG00000015420) #25	TRAPPC6A (ENSBBBG00000015438)	NKPD1 (ENSBBBG00000015453) #26	PPP1R37 (ENSBBBG00000003853) #27	GEMIN7 (ENSBBBG00000015475) #28	ZNF296 (ENSBBBG00000015485) #29	CLASRP (ENSBBBG00000015593) #30	RELB (ENSBBBG00000003442) #31	CLPTM1 (ENSBBBG00000015636) #32	APOC2 (ENSBBBG00000015655) #33	ENSBBBG00000007562 #34
Bos	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00960000187132	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33
Bos_a	ANCESTRAL SPECIES	16	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00960000187132.a	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33
Domestic yak	MODERN SPECIES	12	FBXO46 (ENSBGRG00000020994)	QPCTL (ENSBGRG00000021008)	SNRPD2 (ENSBGRG00000021083)	GIPR (ENSBGRG00000021139) #7	EML2 (ENSBGRG00000021380) #8	GPR4 (ENSBGRG00000021757) #9	OPA3 (ENSBGRG00000021767) #11	VASP (ENSBGRG00000021830) #12	PPM1N (ENSBGRG00000021919) #13	RTN2 (ENSBGRG00000022025) #14	FOSB (ENSBGRG00000022164) #15	ERCC1 (ENSBGRG00000022455) #17	POLR1G (ENSBGRG00000022695) #18	ERCC2 (ENSBGRG00000022782) #20	KLC3 (ENSBGRG00000023303) #21	CKM (ENSBGRG00000023521) #22	MARK4 (ENSBGRG00000023592) #23	ENSBGRG00000023668	ENSBGRG00000023691 #24	ENSBGRG00000023718	ENSBGRG00000023907	ENSBGRG00000023919	ENSBGRG00000023928	BLOC1S3 (ENSBGRG00000023950) #25	TRAPPC6A (ENSBGRG00000023978)	NKPD1 (ENSBGRG00000024051) #26	PPP1R37 (ENSBGRG00000024063) #27	ENSBGRG00000024101 #28	ZNF296 (ENSBGRG00000024122) #29	CLASRP (ENSBGRG00000024145) #30	RELB (ENSBGRG00000024301) #31
Wild yak	MODERN SPECIES	1165	SNRPD2 (ENSBMUG00000020701)	GIPR (ENSBMUG00000020673) #7	EML2 (ENSBMUG00000020571) #8	GPR4 (ENSBMUG00000020549) #9	OPA3 (ENSBMUG00000020538) #11	VASP (ENSBMUG00000020524) #12	PPM1N (ENSBMUG00000020510) #13	RTN2 (ENSBMUG00000020491) #14	FOSB (ENSBMUG00000020469) #15	ERCC1 (ENSBMUG00000020439) #17	POLR1G (ENSBMUG00000020360) #18	PPP1R13L (ENSBMUG00000020329) #19	ENSBMUG00000020297 #20	ENSBMUG00000020276 #20	KLC3 (ENSBMUG00000020258) #21	CKM (ENSBMUG00000020235) #22	MARK4 (ENSBMUG00000020222) #23	EXOC3L2 (ENSBMUG00000020174) #24	ENSBMUG00000020157	ENSBMUG00000020148	TRAPPC6A (ENSBMUG00000020134)	NKPD1 (ENSBMUG00000020111) #26	PPP1R37 (ENSBMUG00000020094) #27	ENSBMUG00000020021 #28	ZNF296 (ENSBMUG00000020016) #29	CLASRP (ENSBMUG00000020005) #30	RELB (ENSBMUG00000019964) #31	ENSBMUG00000019950	CLPTM1 (ENSBMUG00000019939) #32	ENSBMUG00000019921 #33	ENSBMUG00000019911 #34
Bos_b	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00960000187132	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Hybrid Bos Indicus	MODERN SPECIES	9	FBXO46 (ENSBIXG00005003957)	QPCTL (ENSBIXG00005003947)	SNRPD2 (ENSBIXG00005006167)	GIPR (ENSBIXG00005023073) #7	EML2 (ENSBIXG00005022960) #8	ENSBIXG00005022571 #11	VASP (ENSBIXG00005022552) #12	PPM1N (ENSBIXG00005022517) #13	RTN2 (ENSBIXG00005022451) #14	FOSB (ENSBIXG00005022400) #15	ERCC1 (ENSBIXG00005022223) #17	POLR1G (ENSBIXG00005007166) #18	PPP1R13L (ENSBIXG00005022122) #19	ERCC2 (ENSBIXG00005022070) #20	KLC3 (ENSBIXG00005022032) #21	CKM (ENSBIXG00005022002) #22	MARK4 (ENSBIXG00005021933) #23	EXOC3L2 (ENSBIXG00005021785) #24	ENSBIXG00005003661	ENSBIXG00005005749	ENSBIXG00005021698	NKPD1 (ENSBIXG00005021646) #26	PPP1R37 (ENSBIXG00005021626) #27	GEMIN7 (ENSBIXG00005021602) #28	ZNF296 (ENSBIXG00005003640) #29	CLASRP (ENSBIXG00005000003) #30	RELB (ENSBIXG00005021511) #31	CLPTM1 (ENSBIXG00005021324) #32	ENSBIXG00005007369 #33	ENSBIXG00005021223 #34	APOE (ENSBIXG00005021185) #36
Cow	MODERN SPECIES	9	SNRPD2 (ENSBTAG00000012177)	GIPR (ENSBTAG00000005527) #7	EML2 (ENSBTAG00000015764) #8	GPR4 (ENSBTAG00000018398) #9	OPA3 (ENSBTAG00000019605) #11	ENSBTAG00000049026 #11	VASP (ENSBTAG00000019604) #12	PPM1N (ENSBTAG00000014187) #13	RTN2 (ENSBTAG00000008185) #14	FOSB (ENSBTAG00000008182) #15	ERCC1 (ENSBTAG00000017355) #17	POLR1G (ENSBTAG00000023601) #18	PPP1R13L (ENSBTAG00000020689) #19	ERCC2 (ENSBTAG00000002072) #20	KLC3 (ENSBTAG00000002070) #21	CKM (ENSBTAG00000013921) #22	MARK4 (ENSBTAG00000002682) #23	ENSBTAG00000030882	EXOC3L2 (ENSBTAG00000015836) #24	ENSBTAG00000052172	BLOC1S3 (ENSBTAG00000007070) #25	TRAPPC6A (ENSBTAG00000007065)	NKPD1 (ENSBTAG00000020074) #26	PPP1R37 (ENSBTAG00000018834) #27	GEMIN7 (ENSBTAG00000010668) #28	ZNF296 (ENSBTAG00000013702) #29	CLASRP (ENSBTAG00000013697) #30	RELB (ENSBTAG00000038428) #31	CLPTM1 (ENSBTAG00000020560) #32	APOC2 (ENSBTAG00000020558) #33	APOC4 (ENSBTAG00000020556) #34
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Microbat	MODERN SPECIES	2310																CKM (ENSMLUG00000012265) #22	MARK4 (ENSMLUG00000012252) #23
Greater horseshoe bat	MODERN SPECIES	6	QPCTL (ENSRFEG00010008930)	ENSRFEG00010008870	GIPR (ENSRFEG00010008371) #7	EML2 (ENSRFEG00010007875) #8	GPR4 (ENSRFEG00010007847) #9	OPA3 (ENSRFEG00010007786) #11	VASP (ENSRFEG00010007608) #12	RTN2 (ENSRFEG00010007128) #14	FOSB (ENSRFEG00010006945) #15	ERCC1 (ENSRFEG00010006811) #17	POLR1G (ENSRFEG00010006762) #18	PPP1R13L (ENSRFEG00010006729) #19	ERCC2 (ENSRFEG00010006620) #20	KLC3 (ENSRFEG00010006568) #21	ENSRFEG00010006537	CKM (ENSRFEG00010006512) #22	MARK4 (ENSRFEG00010006484) #23	EXOC3L2 (ENSRFEG00010006452) #24	ENSRFEG00010006416	ENSRFEG00010006401	BLOC1S3 (ENSRFEG00010006387) #25	TRAPPC6A (ENSRFEG00010006338)	NKPD1 (ENSRFEG00010006308) #26	PPP1R37 (ENSRFEG00010006262) #27	GEMIN7 (ENSRFEG00010006242) #28	ZNF296 (ENSRFEG00010006216) #29	CLASRP (ENSRFEG00010006108) #30	RELB (ENSRFEG00010006009) #31	CLPTM1 (ENSRFEG00010005927) #32	ENSRFEG00010005861 #33	ENSRFEG00010005837 #34
Megabat	MODERN SPECIES	470	SNRPD2 (ENSPVAG00000001345)	GIPR (ENSPVAG00000001343) #7	EML2 (ENSPVAG00000001340) #8	GPR4 (ENSPVAG00000001339) #9	OPA3 (ENSPVAG00000001338) #11	VASP (ENSPVAG00000001336) #12	ENSPVAG00000001335 #13	PPM1N (ENSPVAG00000001334) #13	RTN2 (ENSPVAG00000001333) #14	FOSB (ENSPVAG00000001332) #15	ERCC1 (ENSPVAG00000001331) #17	POLR1G (ENSPVAG00000001330) #18	PPP1R13L (ENSPVAG00000001329) #19	ERCC2 (ENSPVAG00000001328) #20	KLC3 (ENSPVAG00000001327) #21	CKM (ENSPVAG00000001326) #22	MARK4 (ENSPVAG00000001325) #23	ENSPVAG00000001324 #24
Equus	ANCESTRAL SPECIES	1	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36
Donkey	MODERN SPECIES	18	QPCTL (ENSEASG00005014212)	ENSEASG00005014210	GIPR (ENSEASG00005014208) #7	EML2 (ENSEASG00005014204) #8	GPR4 (ENSEASG00005028869) #9	ENSEASG00005028592 #11	VASP (ENSEASG00005014200) #12	ENSEASG00005037630 #13	RTN2 (ENSEASG00005014192) #14	FOSB (ENSEASG00005025490) #15	ERCC1 (ENSEASG00005014190) #17	POLR1G (ENSEASG00005014188) #18	PPP1R13L (ENSEASG00005014187) #19	ERCC2 (ENSEASG00005013856) #20	KLC3 (ENSEASG00005013822) #21	CKM (ENSEASG00005004121) #22	ENSEASG00005013818 #23	EXOC3L2 (ENSEASG00005013809) #24	ENSEASG00005013803	ENSEASG00005013800	BLOC1S3 (ENSEASG00005025055) #25	ENSEASG00005038539	NKPD1 (ENSEASG00005013789) #26	PPP1R37 (ENSEASG00005013782) #27	GEMIN7 (ENSEASG00005033816) #28	ZNF296 (ENSEASG00005024434) #29	CLASRP (ENSEASG00005013755) #30	RELB (ENSEASG00005013746) #31	CLPTM1 (ENSEASG00005013737) #32	APOC2 (ENSEASG00005033261) #33	APOC4 (ENSEASG00005013735) #34
Horse	MODERN SPECIES	1	QPCTL (ENSECAG00000009265)	SNRPD2 (ENSECAG00000007824)	GIPR (ENSECAG00000015923) #7	EML2 (ENSECAG00000018032) #8	GPR4 (ENSECAG00000045714) #9	OPA3 (ENSECAG00000014284) #11	VASP (ENSECAG00000007818) #12	PPM1N (ENSECAG00000005419) #13	RTN2 (ENSECAG00000022897) #14	FOSB (ENSECAG00000018002) #15	ERCC1 (ENSECAG00000011385) #17	POLR1G (ENSECAG00000032490) #18	PPP1R13L (ENSECAG00000024828) #19	ERCC2 (ENSECAG00000036849) #20	KLC3 (ENSECAG00000022555) #21	CKM (ENSECAG00000022433) #22	MARK4 (ENSECAG00000000359) #23	EXOC3L2 (ENSECAG00000023895) #24	ENSECAG00000023091	BLOC1S3 (ENSECAG00000048765) #25	TRAPPC6A (ENSECAG00000018946)	NKPD1 (ENSECAG00000033188) #26	PPP1R37 (ENSECAG00000012840) #27	GEMIN7 (ENSECAG00000005915) #28	ZNF296 (ENSECAG00000011640) #29	CLASRP (ENSECAG00000009232) #30	RELB (ENSECAG00000020898) #31	CLPTM1 (ENSECAG00000017326) #32	APOC2 (ENSECAG00000014224)	ENSECAG00000046002 #34	APOE (ENSECAG00000008236) #36
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36
Panthera	ANCESTRAL SPECIES	20	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Tiger	MODERN SPECIES	535	BFSP1 (ENSPTIG00000019816)	PCSK2 (ENSPTIG00000018656)	OTOR (ENSPTIG00000018477)	OPA3 (ENSPTIG00000018436) #11	VASP (ENSPTIG00000017955) #12	PPM1N (ENSPTIG00000016985) #13	RTN2 (ENSPTIG00000016394) #14	FOSB (ENSPTIG00000015177) #15	ERCC1 (ENSPTIG00000014519) #17	POLR1G (ENSPTIG00000014078) #18	PPP1R13L (ENSPTIG00000012853) #19	ENSPTIG00000012675 #20	ENSPTIG00000011864 #20	KLC3 (ENSPTIG00000011057) #21	ENSPTIG00000000507	CKM (ENSPTIG00000010161) #22	ENSPTIG00000009796 #23	ENSPTIG00000009092 #23	ENSPTIG00000008710 #24	TRAPPC6A (ENSPTIG00000007805)	GEMIN7 (ENSPTIG00000000303) #28	ENSPTIG00000006698 #30	RELB (ENSPTIG00000004316) #31	CLPTM1 (ENSPTIG00000000945) #32	APOC2 (ENSPTIG00000020728) #33	ENSPTIG00000020606 #34	ENSPTIG00000020485	TOMM40 (ENSPTIG00000019953) #37
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00950000182929.B.b #36
leopard	MODERN SPECIES	103	QPCTL (ENSPPRG00000011974)	GIPR (ENSPPRG00000011461) #7	EML2 (ENSPPRG00000010239) #8	GPR4 (ENSPPRG00000015030) #9	OPA3 (ENSPPRG00000009051) #11	ENSPPRG00000008284 #11	VASP (ENSPPRG00000008102) #12	PPM1N (ENSPPRG00000005053) #13	RTN2 (ENSPPRG00000004264) #14	FOSB (ENSPPRG00000004058) #15	ERCC1 (ENSPPRG00000003321) #17	POLR1G (ENSPPRG00000001954) #18	PPP1R13L (ENSPPRG00000001485) #19	ERCC2 (ENSPPRG00000000507) #20	KLC3 (ENSPPRG00000022836) #21	CKM (ENSPPRG00000023495) #22	ENSPPRG00000023648	MARK4 (ENSPPRG00000023795) #23	EXOC3L2 (ENSPPRG00000024467) #24	BLOC1S3 (ENSPPRG00000014754) #25	TRAPPC6A (ENSPPRG00000024693)	PPP1R37 (ENSPPRG00000018798) #27	GEMIN7 (ENSPPRG00000014746) #28	ZNF296 (ENSPPRG00000018193) #29	CLASRP (ENSPPRG00000017479) #30	RELB (ENSPPRG00000013193) #31	CLPTM1 (ENSPPRG00000012168) #32	APOC2 (ENSPPRG00000010972) #33	ENSPPRG00000010783 #34	ENSPPRG00000010651	APOE (ENSPPRG00000010588) #36
lion	MODERN SPECIES	15	AP2A1 (ENSPLOG00000007711)	TSKS (ENSPLOG00000007572)	CPT1C (ENSPLOG00000007450)	ENSPLOG00000007411	PRMT1 (ENSPLOG00000007276)	BCL2L12 (ENSPLOG00000007139)	IRF3 (ENSPLOG00000007056)	SCAF1 (ENSPLOG00000007025)	RRAS (ENSPLOG00000006992)	PRR12 (ENSPLOG00000006927)	PRRG2 (ENSPLOG00000006869)	NOSIP (ENSPLOG00000006833)	PPP1R13L (ENSPLOG00000006777) #19	ERCC2 (ENSPLOG00000006584) #20	KLC3 (ENSPLOG00000006444) #21	CKM (ENSPLOG00000006406) #22	MARK4 (ENSPLOG00000006356) #23	EXOC3L2 (ENSPLOG00000006300) #24	TRAPPC6A (ENSPLOG00000006245)	NKPD1 (ENSPLOG00000006206) #26	PPP1R37 (ENSPLOG00000006078) #27	ZNF296 (ENSPLOG00000006046) #29	CLASRP (ENSPLOG00000005979) #30	RELB (ENSPLOG00000005791) #31	CLPTM1 (ENSPLOG00000005697) #32	APOC2 (ENSPLOG00000005670) #33	ENSPLOG00000005642 #34	APOE (ENSPLOG00000005599) #36	TOMM40 (ENSPLOG00000005561) #37	NECTIN2 (ENSPLOG00000005523)	BCAM (ENSPLOG00000005452)
Cat	MODERN SPECIES	246	QPCTL (ENSFCAG00000012476)	SNRPD2 (ENSFCAG00000022530)	GIPR (ENSFCAG00000007332) #7	EML2 (ENSFCAG00000007330) #8	GPR4 (ENSFCAG00000031197) #9	OPA3 (ENSFCAG00000030677) #11	VASP (ENSFCAG00000007424) #12	PPM1N (ENSFCAG00000007428) #13	RTN2 (ENSFCAG00000007430) #14	FOSB (ENSFCAG00000030571) #15	ERCC1 (ENSFCAG00000007439) #17	POLR1G (ENSFCAG00000043166) #18	PPP1R13L (ENSFCAG00000033518) #19	ERCC2 (ENSFCAG00000002679) #20	KLC3 (ENSFCAG00000002676) #21	CKM (ENSFCAG00000002672) #22	MARK4 (ENSFCAG00000002671) #23	EXOC3L2 (ENSFCAG00000004804) #24	BLOC1S3 (ENSFCAG00000036089) #25	TRAPPC6A (ENSFCAG00000027259)	NKPD1 (ENSFCAG00000042894) #26	PPP1R37 (ENSFCAG00000001768) #27	GEMIN7 (ENSFCAG00000043198) #28	ZNF296 (ENSFCAG00000040249) #29	CLASRP (ENSFCAG00000033941) #30	RELB (ENSFCAG00000025715) #31	CLPTM1 (ENSFCAG00000004797) #32	ENSFCAG00000018891 #33	APOC4 (ENSFCAG00000004795) #34	ENSFCAG00000033939	TOMM40 (ENSFCAG00000004793) #37
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Canidae	ANCESTRAL SPECIES	5	ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275.d #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Canis_lupus	ANCESTRAL SPECIES		ENSGT00390000003107.b	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275.d #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Dingo	MODERN SPECIES	125	QPCTL (ENSCAFG00020003527)	ENSCAFG00020003532	GIPR (ENSCAFG00020003543) #7	EML2 (ENSCAFG00020003779) #8	GPR4 (ENSCAFG00020011193) #9	OPA3 (ENSCAFG00020011195) #11	ENSCAFG00020011202 #12	PPM1N (ENSCAFG00020011228) #13	RTN2 (ENSCAFG00020011246) #14	FOSB (ENSCAFG00020011287) #15	ERCC1 (ENSCAFG00020011298) #17	POLR1G (ENSCAFG00020011342) #18	PPP1R13L (ENSCAFG00020011344) #19	ERCC2 (ENSCAFG00020011390) #20	KLC3 (ENSCAFG00020012214) #21	CKM (ENSCAFG00020012218) #22	MARK4 (ENSCAFG00020012237) #23	EXOC3L2 (ENSCAFG00020012244) #24	BLOC1S3 (ENSCAFG00020012264) #25	TRAPPC6A (ENSCAFG00020012265)	NKPD1 (ENSCAFG00020012275) #26	PPP1R37 (ENSCAFG00020012294) #27	GEMIN7 (ENSCAFG00020012296) #28	ZNF296 (ENSCAFG00020012298) #29	ENSCAFG00020012303 #30	RELB (ENSCAFG00020012320) #31	CLPTM1 (ENSCAFG00020012406) #32	APOC2 (ENSCAFG00020012410) #33	ENSCAFG00020012416 #34	APOC1 (ENSCAFG00020012420) #35	APOE (ENSCAFG00020012422) #36
Dog	MODERN SPECIES		QPCTL (ENSCAFG00845004866)	GIPR (ENSCAFG00845004894) #7	EML2 (ENSCAFG00845004953) #8	GPR4 (ENSCAFG00845005035) #9	OPA3 (ENSCAFG00845005041) #11	VASP (ENSCAFG00845005094) #12	PPM1N (ENSCAFG00845005133) #13	RTN2 (ENSCAFG00845005157) #14	FOSB (ENSCAFG00845005191) #15	ERCC1 (ENSCAFG00845005241) #17	POLR1G (ENSCAFG00845005277) #18	PPP1R13L (ENSCAFG00845005302) #19	ENSCAFG00845005341	ERCC2 (ENSCAFG00845005380) #20	KLC3 (ENSCAFG00845005524) #21	CKM (ENSCAFG00845005622) #22	MARK4 (ENSCAFG00845005692) #23	EXOC3L2 (ENSCAFG00845005764) #24	BLOC1S3 (ENSCAFG00845005799) #25	TRAPPC6A (ENSCAFG00845005834)	NKPD1 (ENSCAFG00845005872) #26	PPP1R37 (ENSCAFG00845005905) #27	GEMIN7 (ENSCAFG00845005934) #28	ZNF296 (ENSCAFG00845005956) #29	CLASRP (ENSCAFG00845006006) #30	RELB (ENSCAFG00845006117) #31	CLPTM1 (ENSCAFG00845006342) #32	APOC2 (ENSCAFG00845006579) #33	ENSCAFG00845006618 #34	APOC1 (ENSCAFG00845006666) #35	APOE (ENSCAFG00845006705) #36
Red fox	MODERN SPECIES	101	EML2 (ENSVVUG00000003317) #8	GPR4 (ENSVVUG00000004011) #9	OPA3 (ENSVVUG00000004015) #11	ENSVVUG00000004018 #11	VASP (ENSVVUG00000004020) #12	PPM1N (ENSVVUG00000004040) #13	RTN2 (ENSVVUG00000004056) #14	FOSB (ENSVVUG00000004082) #15	ERCC1 (ENSVVUG00000004091) #17	CD3EAP (ENSVVUG00000004115) #18	ENSVVUG00000004117 #19	ENSVVUG00000004122 #19	ENSVVUG00000004131	ERCC2 (ENSVVUG00000004141) #20	KLC3 (ENSVVUG00000004168) #21	CKM (ENSVVUG00000004188) #22	ENSVVUG00000004198	MARK4 (ENSVVUG00000004378) #23	ENSVVUG00000008107	BLOC1S3 (ENSVVUG00000008112) #25	TRAPPC6A (ENSVVUG00000008116)	ENSVVUG00000008141 #26	PPP1R37 (ENSVVUG00000008143) #27	GEMIN7 (ENSVVUG00000008153) #28	ZNF296 (ENSVVUG00000008157) #29	CLASRP (ENSVVUG00000008161) #30	RELB (ENSVVUG00000008209) #31	CLPTM1 (ENSVVUG00000008275) #32	APOC2 (ENSVVUG00000008286) #33	APOC4 (ENSVVUG00000008290) #34	APOC1 (ENSVVUG00000008301) #35
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667.k #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Mustelinae	ANCESTRAL SPECIES	7	ENSGT00390000017608.b	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667.k #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
American mink	MODERN SPECIES	135	SNRPD2 (ENSNVIG00000009077)	GIPR (ENSNVIG00000009001) #7	EML2 (ENSNVIG00000008942) #8	GPR4 (ENSNVIG00000008931) #9	OPA3 (ENSNVIG00000008924) #11	VASP (ENSNVIG00000008886) #12	PPM1N (ENSNVIG00000008818) #13	RTN2 (ENSNVIG00000008748) #14	FOSB (ENSNVIG00000008682) #15	ERCC1 (ENSNVIG00000008650) #17	POLR1G (ENSNVIG00000008637) #18	PPP1R13L (ENSNVIG00000008571) #19	ERCC2 (ENSNVIG00000008419) #20	KLC3 (ENSNVIG00000008354) #21	ENSNVIG00000008342	CKM (ENSNVIG00000008333) #22	MARK4 (ENSNVIG00000008204) #23	EXOC3L2 (ENSNVIG00000008145) #24	BLOC1S3 (ENSNVIG00000008133) #25	TPC6A (ENSNVIG00000008111)	NKPD1 (ENSNVIG00000008090) #26	PPP1R37 (ENSNVIG00000008044) #27	GEMI7 (ENSNVIG00000008011) #28	ZNF296 (ENSNVIG00000008007) #29	CLASRP (ENSNVIG00000007850) #30	RELB (ENSNVIG00000007731) #31	CLPTM1 (ENSNVIG00000007696) #32	APOC2 (ENSNVIG00000007673) #33	ENSNVIG00000007657 #34	ENSNVIG00000007641 #35	APOE (ENSNVIG00000007616) #36
Ferret	MODERN SPECIES	291	FBXO46 (ENSMPUG00000019374)	QPCTL (ENSMPUG00000005727)	SNRPD2 (ENSMPUG00000005733)	GIPR (ENSMPUG00000005756) #7	EML2 (ENSMPUG00000005855) #8	OPA3 (ENSMPUG00000005872) #11	VASP (ENSMPUG00000005880) #12	PPM1N (ENSMPUG00000005895) #13	RTN2 (ENSMPUG00000005903) #14	FOSB (ENSMPUG00000005914) #15	ERCC1 (ENSMPUG00000005947) #17	POLR1G (ENSMPUG00000005965) #18	PPP1R13L (ENSMPUG00000005975) #19	ERCC2 (ENSMPUG00000005989) #20	KLC3 (ENSMPUG00000006006) #21	CKM (ENSMPUG00000006049) #22	MARK4 (ENSMPUG00000006053) #23	BLOC1S3 (ENSMPUG00000019376) #25	TRAPPC6A (ENSMPUG00000006065)	NKPD1 (ENSMPUG00000006117) #26	PPP1R37 (ENSMPUG00000006125) #27	GEMIN7 (ENSMPUG00000019379) #28	ENSMPUG00000006134	ENSMPUG00000006143 #29	CLPTM1 (ENSMPUG00000006148) #32	APOC2 (ENSMPUG00000006161) #33	ENSMPUG00000006178 #34	APOC1 (ENSMPUG00000006201) #35	APOE (ENSMPUG00000006228) #36	TOMM40 (ENSMPUG00000006267) #37	ENSMPUG00000006278
Ursidae	ANCESTRAL SPECIES	30	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000186179	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667.k #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00950000186185	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Giant Panda	MODERN SPECIES	1958																ENSAMEG00000028139 #22
Ursus	ANCESTRAL SPECIES	13	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000186179	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584.a #35	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37	ENSGT00940000161167	ENSGT00940000161038	ENSGT00940000162336
Polar bear	MODERN SPECIES	115	GIPR (ENSUMAG00000023684) #7	EML2 (ENSUMAG00000023616) #8	GPR4 (ENSUMAG00000023598) #9	OPA3 (ENSUMAG00000023597) #11	ENSUMAG00000023595 #11	VASP (ENSUMAG00000023593) #12	ENSUMAG00000023592 #13	RTN2 (ENSUMAG00000023591) #14	FOSB (ENSUMAG00000023589) #15	ERCC1 (ENSUMAG00000023588) #17	POLR1G (ENSUMAG00000023587) #18	ENSUMAG00000023583	ERCC2 (ENSUMAG00000023492) #20	ENSUMAG00000023480 #21	ENSUMAG00000023478	CKM (ENSUMAG00000023476) #22	MARK4 (ENSUMAG00000023463) #23	ENSUMAG00000023455	TRAPPC6A (ENSUMAG00000023452)	GEMIN7 (ENSUMAG00000023443) #28	CLASRP (ENSUMAG00000023392) #30	RELB (ENSUMAG00000023342) #31	CLPTM1 (ENSUMAG00000023328) #32	ENSUMAG00000023321 #33	APOC1 (ENSUMAG00000023318) #35	NECTIN2 (ENSUMAG00000023265)	BCAM (ENSUMAG00000023202)	CBLC (ENSUMAG00000023192)	BCL3 (ENSUMAG00000023187)	CEACAM16 (ENSUMAG00000023183)	CEACAM19 (ENSUMAG00000023173)
American black bear	MODERN SPECIES	353				OPA3 (ENSUAMG00000020211) #11	VASP (ENSUAMG00000020210) #12	PPM1N (ENSUAMG00000020209) #13	RTN2 (ENSUAMG00000020208) #14	FOSB (ENSUAMG00000020207) #15	ERCC1 (ENSUAMG00000020205) #17	POLR1G (ENSUAMG00000020204) #18	PPP1R13L (ENSUAMG00000020203) #19	ENSUAMG00000020202	ERCC2 (ENSUAMG00000019562) #20	KLC3 (ENSUAMG00000019549) #21	ENSUAMG00000019548	CKM (ENSUAMG00000019547) #22	MARK4 (ENSUAMG00000019418) #23	EXOC3L2 (ENSUAMG00000019417) #24
Eulipotyphla	ANCESTRAL SPECIES	477															ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23
Hedgehog	MODERN SPECIES	8959															ERCC2 (ENSEEUG00000010569) #20	CKM (ENSEEUG00000010522) #22	MARK4 (ENSEEUG00000010403) #23
Common shrew	MODERN SPECIES	7100																ENSSARG00000007880 #22	ENSSARG00000007858 #23
Atlantogenata	ANCESTRAL SPECIES	48	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35
Xenarthra	ANCESTRAL SPECIES	769											ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23
Armadillo	MODERN SPECIES	459											ERCC1 (ENSDNOG00000040226) #17	POLR1G (ENSDNOG00000041816) #18	PPP1R13L (ENSDNOG00000033571) #19	ERCC2 (ENSDNOG00000010904) #20	KLC3 (ENSDNOG00000049555) #21	CKM (ENSDNOG00000005772) #22	MARK4 (ENSDNOG00000041432) #23
Afrotheria	ANCESTRAL SPECIES	22	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Afrotheria_a	ANCESTRAL SPECIES	21	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000153887.B #8	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000162694 #13	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00390000015914 #34	ENSGT00390000011584 #35	ENSGT00950000182929.B.b #36
Hyrax	MODERN SPECIES	7108																CKM (ENSPCAG00000016007) #22	ENSPCAG00000015918 #23
Elephant	MODERN SPECIES	375	SIX5 (ENSLAFG00000030935)	QPCTL (ENSLAFG00000004208)	SNRPD2 (ENSLAFG00000004205)	FBXO46 (ENSLAFG00000027244)	GIPR (ENSLAFG00000027053) #7	EML2 (ENSLAFG00000031949) #8	ENSLAFG00000028620 #11	ENSLAFG00000027518 #11	VASP (ENSLAFG00000026860) #12	RTN2 (ENSLAFG00000028220) #14	FOSB (ENSLAFG00000008834) #15	ERCC1 (ENSLAFG00000001829) #17	POLR1G (ENSLAFG00000001827) #18	PPP1R13L (ENSLAFG00000001823) #19	ERCC2 (ENSLAFG00000006888) #20	CKM (ENSLAFG00000022873) #22	MARK4 (ENSLAFG00000011196) #23	ENSLAFG00000032528 #24	ENSLAFG00000030383	TRAPPC6A (ENSLAFG00000012046)	NKPD1 (ENSLAFG00000012043) #26	PPP1R37 (ENSLAFG00000018620) #27	GEMIN7 (ENSLAFG00000016380) #28	ZNF296 (ENSLAFG00000029107) #29	CLASRP (ENSLAFG00000008075) #30	RELB (ENSLAFG00000008071) #31	CLPTM1 (ENSLAFG00000008066) #32	APOC2 (ENSLAFG00000027825) #33	ENSLAFG00000014178	APOC1 (ENSLAFG00000014179) #35	APOE (ENSLAFG00000014329) #36
Marsupialia	ANCESTRAL SPECIES	20	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000177245	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00390000003107.b	ENSGT00390000017608	ENSGT00940000161988 #7	ENSGT00940000177245	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000160667 #29	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000007913 #33	ENSGT00950000182929.B.b #36	ENSGT00390000003308.a #37
Diprotodontia	ANCESTRAL SPECIES	109										ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Diprotodontia_a	ANCESTRAL SPECIES	103										ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000162356 #21	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Common wonbat	MODERN SPECIES	1										FOSB (ENSVURG00010000002) #15	ENSVURG00010000003 #17	ENSVURG00010000004 #18	PPP1R13L (ENSVURG00010000005) #19	ERCC2 (ENSVURG00010000006) #20	KLC3 (ENSVURG00010000007) #21	CKM (ENSVURG00010000008) #22	MARK4 (ENSVURG00010000009) #23	EXOC3L2 (ENSVURG00010000010) #24
koala	MODERN SPECIES	427										FOSB (ENSPCIG00000022951) #15	ENSPCIG00000022946 #17	PPP1R13L (ENSPCIG00000022941) #19	ENSPCIG00000022939 #18	ERCC2 (ENSPCIG00000022927) #20	KLC3 (ENSPCIG00000022923) #21	CKM (ENSPCIG00000010399) #22	MARK4 (ENSPCIG00000010407) #23	EXOC3L2 (ENSPCIG00000010412) #24
Wallaby	MODERN SPECIES	10282																CKM (ENSMEUG00000011890) #22
Tasmanian devil	MODERN SPECIES	2	DMPK (ENSSHAG00000000724)	SIX5 (ENSSHAG00000024498)	ENSSHAG00000001754	ENSSHAG00000028308	ENSSHAG00000023843	ENSSHAG00000029129	GIPR (ENSSHAG00000030736) #7	EML2 (ENSSHAG00000002041) #8	VASP (ENSSHAG00000003369) #12	RTN2 (ENSSHAG00000003830) #14	FOSB (ENSSHAG00000032198) #15	ENSSHAG00000003117 #17	PPP1R13L (ENSSHAG00000002660) #19	ERCC2 (ENSSHAG00000002169) #20	KLC3 (ENSSHAG00000001691) #21	CKM (ENSSHAG00000002132) #22	ENSSHAG00000002976 #23	EXOC3L2 (ENSSHAG00000004086) #24	ENSSHAG00000004430	TRAPPC6A (ENSSHAG00000005027)	ENSSHAG00000026930 #26	ENSSHAG00000022537 #27	ENSSHAG00000032027 #28	ENSSHAG00000005287 #27	ENSSHAG00000020840 #29	CLASRP (ENSSHAG00000029242) #30	RELB (ENSSHAG00000003442) #31	ENSSHAG00000024210 #33	ENSSHAG00000001301 #36	ENSSHAG00000026510	ENSSHAG00000004670
Opossum	MODERN SPECIES	427																CKM (ENSMODG00000051059) #22	ENSMODG00000047890 #23	ENSMODG00000050366 #23	EXOC3L2 (ENSMODG00000010936) #24
Platypus	MODERN SPECIES	16	GPR4 (ENSOANG00000050364) #9	OPA3 (ENSOANG00000036874) #11	ENSOANG00000047387 #12	ENSOANG00000050926	ENSOANG00000043601 #14	ENSOANG00000038061 #14	FOSB (ENSOANG00000047430) #15	SNRPD2 (ENSOANG00000000813)	ENSOANG00000049944 #17	ENSOANG00000036797 #18	ENSOANG00000041617 #19	ENSOANG00000002088 #20	ENSOANG00000006354 #20	KLC3 (ENSOANG00000038764) #21	ENSOANG00000049426	CKM (ENSOANG00000000782) #22	MARK4 (ENSOANG00000041059) #23	EXOC3L2 (ENSOANG00000050767) #24	ENSOANG00000013002 #25	ENSOANG00000013001	PPP1R37 (ENSOANG00000049487) #27	GEMIN7 (ENSOANG00000008945) #28	ENSOANG00000043610 #29	CLASRP (ENSOANG00000042693) #30	RELB (ENSOANG00000044083) #31	CLPTM1 (ENSOANG00000039979) #32	ENSOANG00000045516	ENSOANG00000020309	ENSOANG00000037534	ENSOANG00000019717	ENSOANG00000002747
Sauria	ANCESTRAL SPECIES	34	ENSGT01030000235120	ENSGT00940000153792.A	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000156070.b	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Lepidosauria	ANCESTRAL SPECIES	143							ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000156070.b	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01070000253869	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24
Episquamata	ANCESTRAL SPECIES	21	ENSGT00390000014835	ENSGT00940000161313	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000156265.x.b.a.a.b	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000156070.b	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01070000253869	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01000000219624	ENSGT00940000162064.c.a.a.a.a.b.a	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b	ENSGT00940000155736.D.d	ENSGT00450000040362 #18	ENSGT00390000011275 #17	ENSGT00940000164086	ENSGT00940000160655
Toxicofera	ANCESTRAL SPECIES	22	ENSGT00940000161203	ENSGT00390000014835	ENSGT00940000161313	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000156265.x.b.a.a.b	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01000000219624	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b	ENSGT00940000155736.D.d	ENSGT00390000011275 #17	ENSGT00940000164086	ENSGT00940000160655	ENSGT00940000159399	ENSGT00940000165900	ENSGT00950000182767.b.a.b.b.b
Elapidae	ANCESTRAL SPECIES	9	ENSGT00940000160922	ENSGT00940000161203	ENSGT00390000014835	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000156265.x.b.a.a.b	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01000000219624	ENSGT00390000011275 #17	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b	ENSGT00940000155736.D.d	ENSGT00940000160655	ENSGT00940000159399	ENSGT00940000165900	ENSGT00390000007046.b.a.b	ENSGT00390000012368
Elapidae_a	ANCESTRAL SPECIES	71	ENSGT00940000161203	ENSGT00390000014835	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000156265.x.b.a.a.b	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT01100000264206	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01000000219624	ENSGT00390000011275 #17	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b	ENSGT00940000155736.D.d	ENSGT00940000160655	ENSGT00940000159399	ENSGT00940000165900	ENSGT00390000007046.b.a.b	ENSGT00390000012368
Acanthophiinae	ANCESTRAL SPECIES	69			ENSGT00940000161203.m	ENSGT00390000014835	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01100000264206	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00390000011275 #17	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b	ENSGT00940000162522	ENSGT00940000160655	ENSGT00940000159399	ENSGT00390000007046.b.a.b	ENSGT00390000012368	ENSGT00940000160033.b
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	806															ENSNSUG00000005019	ENSNSUG00000005018 #22	ENSNSUG00000005017 #23	ENSNSUG00000005016 #23	ENSNSUG00000005015 #23	ENSNSUG00000005014 #24
Mainland tiger snake	MODERN SPECIES	807																ENSNSUG00000005023 #22	ENSNSUG00000005024	ENSNSUG00000005026 #23	ENSNSUG00000005028 #23	ENSNSUG00000005029 #23	ENSNSUG00000005031 #24
Mainland tiger snake	MODERN SPECIES	809																ENSNSUG00000005048 #22	ENSNSUG00000005053	ENSNSUG00000005057 #23	ENSNSUG00000005060 #23	ENSNSUG00000005061 #23	ENSNSUG00000005062 #24
Mainland tiger snake	MODERN SPECIES	808															ENSNSUG00000005045	ENSNSUG00000005040 #22	ENSNSUG00000005039 #23	ENSNSUG00000005038 #23	ENSNSUG00000005037 #23	ENSNSUG00000005035 #24
Eastern brown snake	MODERN SPECIES	170	ENSPTXG00000011309	SYCN (ENSPTXG00000011315)	PAK4 (ENSPTXG00000011316)	ACP7 (ENSPTXG00000011317)	FBXO27 (ENSPTXG00000011318)	EML2 (ENSPTXG00000011349) #8	GPR4 (ENSPTXG00000014693) #9	OPA3 (ENSPTXG00000014694) #11	VASP (ENSPTXG00000014696) #12	ENSPTXG00000014697 #14	FOSB (ENSPTXG00000014699) #15	ENSPTXG00000014701	PPP1R13L (ENSPTXG00000014702) #19	ERCC2 (ENSPTXG00000014706) #20	ENSPTXG00000014736	CKM (ENSPTXG00000014737) #22	ENSPTXG00000014738	MARK4 (ENSPTXG00000014739) #23	EXOC3L2 (ENSPTXG00000014741) #24	ERCC1 (ENSPTXG00000014742) #17	ENSPTXG00000014743	ENSPTXG00000014744	ENSPTXG00000014757	ENSPTXG00000016538	ENSPTXG00000016540	ENSPTXG00000017664	CYP2F1 (ENSPTXG00000017665)	ENSPTXG00000017667	RAB4B (ENSPTXG00000017668)	SNRPA (ENSPTXG00000017669)	ACTMAP (ENSPTXG00000017670)
Blue-lipped sea krait	MODERN SPECIES	2070									ENSLLTG00000001353	ENSLLTG00000001342 #14	FOSB (ENSLLTG00000001328) #15	PPP1R13L (ENSLLTG00000001309) #19	ERCC2 (ENSLLTG00000001275) #20	ENSLLTG00000001248	ENSLLTG00000001234	CKM (ENSLLTG00000001202) #22	MARK4 (ENSLLTG00000001168) #23	EXOC3L2 (ENSLLTG00000001143) #24	ENSLLTG00000001126	ERCC1 (ENSLLTG00000001111) #17
Indian cobra	MODERN SPECIES	11	LRFN3 (ENSNNAG00000010351)	SYCN (ENSNNAG00000010388)	ENSNNAG00000010396	ACP7 (ENSNNAG00000010434)	FBXO27 (ENSNNAG00000010453)	EML2 (ENSNNAG00000011004) #8	GPR4 (ENSNNAG00000017267) #9	ENSNNAG00000017275	VASP (ENSNNAG00000017281) #12	ENSNNAG00000017289 #14	ENSNNAG00000017295 #14	FOSB (ENSNNAG00000017301) #15	PPP1R13L (ENSNNAG00000017307) #19	ERCC2 (ENSNNAG00000017319) #20	ENSNNAG00000017333	CKM (ENSNNAG00000017344) #22	MARK4 (ENSNNAG00000017376) #23	EXOC3L2 (ENSNNAG00000017458) #24	ENSNNAG00000017468	ERCC1 (ENSNNAG00000017477) #17	ENSNNAG00000017487	ENSNNAG00000017573	ENSNNAG00000018314	ENSNNAG00000017917	ENSNNAG00000018320	ENSNNAG00000018326	EGLN2 (ENSNNAG00000018329)	RAB4B (ENSNNAG00000018334)	SNRPA (ENSNNAG00000018339)	ACTMAP (ENSNNAG00000018342)	ITPKC (ENSNNAG00000018346)
Lizard	MODERN SPECIES	2148																ENSACAG00000005396 #22
Laterata	ANCESTRAL SPECIES	17	ENSGT00390000014835	ENSGT00940000161313	ENSGT00940000159792.C	ENSGT00390000015485	ENSGT00940000161841	ENSGT00940000156265.x.b.a.a.b	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000156070.b	ENSGT00940000160599 #14	ENSGT00940000160358 #15	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01070000253869	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01000000219624	ENSGT00940000155736.D.d	ENSGT00940000162064.c.a.a.a.a.b.a	ENSGT00940000162064.c.a.a.a.a.a	ENSGT00940000161670	ENSGT00940000162064.c.a.a.a.b	ENSGT00940000162064.c.a.b	ENSGT00940000162064.c.b.b	ENSGT00940000164086	ENSGT00940000160655	ENSGT00940000159399	ENSGT00940000165900
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000009299	ENSPMRG00000009277	ENSPMRG00000009265	ENSPMRG00000009257	ENSPMRG00000009248	ENSPMRG00000009241	ENSPMRG00000009239	ENSPMRG00000009231	ENSPMRG00000009222	ENSPMRG00000009219	ENSPMRG00000009213	ERCC1 (ENSPMRG00000009198) #17	ENSPMRG00000009193	EXOC3L2 (ENSPMRG00000009183) #24	ENSPMRG00000009180	ENSPMRG00000015349 #22	MARK4 (ENSPMRG00000015345) #23	ENSPMRG00000015340	ENSPMRG00000015331 #22	ENSPMRG00000015321	ERCC2 (ENSPMRG00000015033) #20	ENSPMRG00000014958	PPP1R13L (ENSPMRG00000014946) #19	ENSPMRG00000014936	FOSB (ENSPMRG00000014931) #15	RTN2 (ENSPMRG00000014914) #14	ENSPMRG00000014904	ENSPMRG00000014898	ENSPMRG00000014895	ENSPMRG00000014887	ENSPMRG00000014882 #12
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000014858	OPA3 (ENSPMRG00000014861) #11	ENSPMRG00000014868 #12	ENSPMRG00000014882 #12	ENSPMRG00000014887	ENSPMRG00000014895	ENSPMRG00000014898	ENSPMRG00000014904	RTN2 (ENSPMRG00000014914) #14	FOSB (ENSPMRG00000014931) #15	ENSPMRG00000014936	PPP1R13L (ENSPMRG00000014946) #19	ENSPMRG00000014958	ERCC2 (ENSPMRG00000015033) #20	ENSPMRG00000015321	ENSPMRG00000015331 #22	ENSPMRG00000015340	MARK4 (ENSPMRG00000015345) #23	ENSPMRG00000015349 #22	ENSPMRG00000009180	EXOC3L2 (ENSPMRG00000009183) #24	ENSPMRG00000009193	ERCC1 (ENSPMRG00000009198) #17	ENSPMRG00000009213	ENSPMRG00000009219	ENSPMRG00000009222	ENSPMRG00000009231	ENSPMRG00000009239	ENSPMRG00000009241	ENSPMRG00000009248	ENSPMRG00000009257
Argentine black and white tegu	MODERN SPECIES	153																CKM (ENSSMRG00000000242) #22	ENSSMRG00000000273	MARK4 (ENSSMRG00000000288) #23	EXOC3L2 (ENSSMRG00000000356) #24	ENSSMRG00000000403	ENSSMRG00000000421	ENSSMRG00000000455	ENSSMRG00000000471	ENSSMRG00000000500	ENSSMRG00000001578	ENSSMRG00000002229	ENSSMRG00000002479	ENSSMRG00000002480	ENSSMRG00000002485	RAB4B (ENSSMRG00000002487)	ENSSMRG00000002488
tuatara	MODERN SPECIES	624	ENSSPUG00000010601	ENSSPUG00000010612 #25	ENSSPUG00000010627	ENSSPUG00000010645	ENSSPUG00000010659	ENSSPUG00000010669	PPP1R37 (ENSSPUG00000010678) #27	GEMIN7 (ENSSPUG00000010715) #28	CLASRP (ENSSPUG00000010734) #30	RELB (ENSSPUG00000010794) #31	CLPTM1 (ENSSPUG00000010814) #32	ENSSPUG00000010842	ERCC1 (ENSSPUG00000010856) #17	PPP1R13L (ENSSPUG00000010875) #19	ERCC2 (ENSSPUG00000010890) #20	CKM (ENSSPUG00000010970) #22	ENSSPUG00000010983	MARK4 (ENSSPUG00000010995) #23	EXOC3L2 (ENSSPUG00000011049) #24	EML2 (ENSSPUG00000011075) #8	OPA3 (ENSSPUG00000011122) #11	VASP (ENSSPUG00000011133) #12	ENSSPUG00000011151	ENSSPUG00000011163 #14	ENSSPUG00000011187	ENSSPUG00000011196	ENSSPUG00000011225	ENSSPUG00000011236	ENSSPUG00000011241	ENSSPUG00000011252	ACP7 (ENSSPUG00000011268)
Archelosauria	ANCESTRAL SPECIES	33			ENSGT00940000163913	ENSGT00390000008756 #25	ENSGT00390000012948.a	ENSGT00650000093443.x #26	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01090000261113	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156070.b	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00940000153887.B #8	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000154133.B	ENSGT00950000183135.A.a
Archosauria	ANCESTRAL SPECIES	62						ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00940000157454 #27	ENSGT00650000093443.x #26	ENSGT00940000162258.z	ENSGT00390000011275 #17	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01090000261113	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT00530000064222.a	ENSGT00390000003107.b
Aves	ANCESTRAL SPECIES	62						ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00940000157454 #27	ENSGT00650000093443.x #26	ENSGT00940000162258.z	ENSGT00390000011275 #17	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT00530000064222.a	ENSGT00390000003107.b
African ostrich	MODERN SPECIES	375															ERCC2 (ENSSCUG00000000746) #20	CKM (ENSSCUG00000000749) #22	ENSSCUG00000000752	ENSSCUG00000000756 #23
Neognathae	ANCESTRAL SPECIES	49	ENSGT01030000234635.a.b.a.b.b.a.b	ENSGT00940000156119.v	ENSGT00550000075063	ENSGT00940000160719	ENSGT00940000163335	ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00940000157454 #27	ENSGT00650000093443.x #26	ENSGT00940000162258.z	ENSGT00390000011275 #17	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877
Galloanserae	ANCESTRAL SPECIES																	ENSGT00950000182772.A.a.a.b #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000182772.A.a.a.b #22
Japanese quail	MODERN SPECIES	151															ENSCJPG00005000570	ENSCJPG00005000564 #22
Neognathae_b	ANCESTRAL SPECIES	46	ENSGT01030000234635.a.b.a.b.b.a.b	ENSGT00940000156119.v	ENSGT00550000075063	ENSGT00940000160719	ENSGT00940000163335	ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00940000157454 #27	ENSGT00650000093443.x #26	ENSGT00940000162258.z	ENSGT00390000011275 #17	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877
Neognathae_c	ANCESTRAL SPECIES	94															ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT01030000234877
Golden eagle	MODERN SPECIES	88													SUPT5H (ENSACCG00020016499)	TIMM50 (ENSACCG00020016532)	ERCC2 (ENSACCG00020016536) #20	CKM (ENSACCG00020016538) #22	ENSACCG00020016543	ENSACCG00020016546
Passeriformes	ANCESTRAL SPECIES	159																ENSGT00950000182772.A.a.a.b #22	ENSGT00390000017045
Passeriformes_d	ANCESTRAL SPECIES	152																ENSGT00950000182772.A.a.a.b #22	ENSGT00390000017045
Passeriformes_g	ANCESTRAL SPECIES	153																ENSGT00950000182772.A.a.a.b #22	ENSGT00390000017045
Passeroidea	ANCESTRAL SPECIES	162																ENSGT00950000182772.A.a.a.b #22	ENSGT00390000017045
Zebra finch	MODERN SPECIES	80												RYR1 (ENSTGUG00000026818)	ENSTGUG00000024026	ENSTGUG00000018858	ENSTGUG00000020063	CKM (ENSTGUG00000025089) #22	ENSTGUG00000021327	ENSTGUG00000024998	ENSTGUG00000026245	ENSTGUG00000021543	ENSTGUG00000018840	ENSTGUG00000024711	ENSTGUG00000025753	ENSTGUG00000019200	ENSTGUG00000028831	ENSTGUG00000028993	ENSTGUG00000028329	ENSTGUG00000028966	ENSTGUG00000028466	ENSTGUG00000018937	ENSTGUG00000021349
Medium ground finch	MODERN SPECIES	676																ENSGFOG00000010952 #22
Cryptodira	ANCESTRAL SPECIES	35		ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00940000157454 #27	ENSGT01100000263552.h.b.t.f	ENSGT00650000093443.x #26	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00940000163913	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000167306	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01090000261113	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156070.b	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00940000153887.B #8	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850
Testudinoidea	ANCESTRAL SPECIES	30	ENSGT00940000160230 #31	ENSGT00940000153892.A #30	ENSGT00390000018039 #28	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000157454 #27	ENSGT01100000263552.h.b.t.f	ENSGT00650000093443.x #26	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00940000163913	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000167306	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01100000263552.h.b.s.a.b.b	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156070.b	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00940000153887.B #8	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000161006.l.a	ENSGT00940000161006.l.b	ENSGT00940000154133.B
Testudinidae	ANCESTRAL SPECIES	36					ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000157454 #27	ENSGT01100000263552.h.b.t.f	ENSGT00650000093443.x #26	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00940000167306	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000156265.x.b.a.a.b	ENSGT01100000263552.h.b.s.a.b.b	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000156070.b	ENSGT00940000156765 #12	ENSGT00390000009795 #11	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00940000153887.B #8	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000161006.l.a	ENSGT00940000162008
Goode s thornscrub tortoise	MODERN SPECIES	134	CLPTM1 (ENSGEVG00005013296) #32	ENSGEVG00005013272	ERCC1 (ENSGEVG00005013251) #17	ENSGEVG00005013236 #18	PPP1R37 (ENSGEVG00005013199) #27	ENSGEVG00005013133	NKPD1 (ENSGEVG00005013100) #26	ENSGEVG00005013072	TRAPPC6A (ENSGEVG00005013046)	BLOC1S3 (ENSGEVG00005016094) #25	ENSGEVG00005016063	PPP1R13L (ENSGEVG00005015922) #19	ERCC2 (ENSGEVG00005015881) #20	ENSGEVG00005015173	ENSGEVG00005015014	CKM (ENSGEVG00005014945) #22	MARK4 (ENSGEVG00005014914) #23	EXOC3L2 (ENSGEVG00005014812) #24	ENSGEVG00005014723	ENSGEVG00005014700	FOSB (ENSGEVG00005014621) #15	ENSGEVG00005014552 #14	ENSGEVG00005014505 #14	ENSGEVG00005014415	VASP (ENSGEVG00005014375) #12	OPA3 (ENSGEVG00005014359) #11	GPR4 (ENSGEVG00005014339) #9	EML2 (ENSGEVG00005010764) #8	ENSGEVG00005009904	ENSGEVG00005009827	FBXO46 (ENSGEVG00005009811)
Abingdon island giant tortoise	MODERN SPECIES	2009	ERCC1 (ENSCABG00000007991) #17	PPP1R37 (ENSCABG00000007999) #27	ENSCABG00000008004	NKPD1 (ENSCABG00000008005) #26	ENSCABG00000008007	TRAPPC6A (ENSCABG00000008009)	BLOC1S3 (ENSCABG00000008011) #25	ENSCABG00000008015	ENSCABG00000008023	ENSCABG00000008025	PPP1R13L (ENSCABG00000008029) #19	ENSCABG00000008033	ERCC2 (ENSCABG00000008035) #20	ENSCABG00000008039	ENSCABG00000008040	CKM (ENSCABG00000008042) #22	MARK4 (ENSCABG00000008045) #23	EXOC3L2 (ENSCABG00000008050) #24	ENSCABG00000008051	ENSCABG00000008052	ENSCABG00000008054	ENSCABG00000008055	FOSB (ENSCABG00000008056) #15	ENSCABG00000008057 #14	ENSCABG00000008059	ENSCABG00000008061 #12	ENSCABG00000008063	EML2 (ENSCABG00000008161) #8	ENSCABG00000013274	QPCTL (ENSCABG00000013296)	ENSCABG00000013500
Emydidae	ANCESTRAL SPECIES	77	ENSGT00390000018039 #28	ENSGT00940000153892.A #30	ENSGT00940000160230 #31	ENSGT00530000063461.B #32	ENSGT00510000048522	ENSGT00390000011275 #17	ENSGT00450000040362 #18	ENSGT00940000157454 #27	ENSGT00650000093443.x #26	ENSGT00940000162258.v	ENSGT00390000012948.a	ENSGT00390000008756 #25	ENSGT00940000163913	ENSGT00940000160551 #19	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT01100000263552.h.b.s.a.b.b	ENSGT00940000160358 #15	ENSGT00940000160599 #14	ENSGT00940000153887.B #8	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000161006.l.a.b	ENSGT00860000136302	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000166203
Three-toed box turtle	MODERN SPECIES	252	RELB (ENSTMTG00000007484) #31	CLASRP (ENSTMTG00000007459) #30	ENSTMTG00000007445 #30	ENSTMTG00000007364	ENSTMTG00000007324	ENSTMTG00000007285	PPP1R37 (ENSTMTG00000007263) #27	ENSTMTG00000007108	TRAPPC6A (ENSTMTG00000007076)	ENSTMTG00000007067 #25	ENSTMTG00000007039	ENSTMTG00000007035	PPP1R13L (ENSTMTG00000006938) #19	ENSTMTG00000006907	ENSTMTG00000006897	CKM (ENSTMTG00000006864) #22	ENSTMTG00000006854 #23	ENSTMTG00000006830 #23	EXOC3L2 (ENSTMTG00000006808) #24	ENSTMTG00000006798	FOSB (ENSTMTG00000006785) #15	ENSTMTG00000006752 #14	EML2 (ENSTMTG00000003755) #8	ENSTMTG00000003421	ENSTMTG00000003409	QPCTL (ENSTMTG00000003398)	ENSTMTG00000003368	NOVA2 (ENSTMTG00000003357)	MYPOP (ENSTMTG00000003346)	IRF2BP1 (ENSTMTG00000003331)	ENSTMTG00000008031
painted turtle	MODERN SPECIES	974	CLASRP (ENSCPBG00000014391) #30	RELB (ENSCPBG00000014390) #31	CLPTM1 (ENSCPBG00000014389) #32	ENSCPBG00000014387	ERCC1 (ENSCPBG00000014385) #17	ENSCPBG00000014383 #18	PPP1R37 (ENSCPBG00000014378) #27	NKPD1 (ENSCPBG00000014375) #26	ENSCPBG00000014374	TRAPPC6A (ENSCPBG00000014372)	BLOC1S3 (ENSCPBG00000014370) #25	ENSCPBG00000014369	ENSCPBG00000014368	PPP1R13L (ENSCPBG00000014365) #19	ENSCPBG00000014363	CKM (ENSCPBG00000014362) #22	MARK4 (ENSCPBG00000014222) #23
Anura	ANCESTRAL SPECIES	86	ENSGT00940000175813	ENSGT00390000017608	ENSGT00940000161006.b	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153887.B #8	ENSGT01100000263537.b.b.c.a.a #9	ENSGT00390000009795 #11	ENSGT00940000156765 #12	ENSGT00940000160599 #14	ENSGT00940000166395	ENSGT00940000160358 #15	ENSGT00450000040362 #18	ENSGT00940000160551 #19	ENSGT00950000182970.C #20	ENSGT00950000182772.A.a.a.b #22	ENSGT00940000159555 #23	ENSGT01030000234613.b.b #24	ENSGT00940000161740	ENSGT00450000040421	ENSGT00390000017045	ENSGT00500000044869.b	ENSGT01030000234517.F	ENSGT00940000154133.B	ENSGT00950000183135.A.a	ENSGT00530000063461.B #32	ENSGT00940000160230 #31	ENSGT00940000156484.a	ENSGT00940000157454 #27	ENSGT00390000018039 #28	ENSGT00390000012948.a
Frog	MODERN SPECIES	8	ENSXETG00000018263	snrpd2 (ENSXETG00000002173)	pglyrp1 (ENSXETG00000018262)	qpctl (ENSXETG00000018261)	fbxo46 (ENSXETG00000047788)	gipr (ENSXETG00000018255)	eml1 (ENSXETG00000018242) #8	vasp (ENSXETG00000018239) #12	gpr4 (ENSXETG00000033328) #9	opa3 (ENSXETG00000018240) #11	rtn2 (ENSXETG00000024454) #14	fosb (ENSXETG00000035471) #15	ENSXETG00000039831 #18	ppp1r13l (ENSXETG00000018235) #19	ercc2 (ENSXETG00000018229) #20	ckm (ENSXETG00000019108) #22	ENSXETG00000037947	mark4 (ENSXETG00000019104) #23	exoc3l2 (ENSXETG00000040252) #24	nova2 (ENSXETG00000019101)	sympk (ENSXETG00000024453)	mypop (ENSXETG00000042112)	rsph6a (ENSXETG00000019096)	dmpk (ENSXETG00000026278)	ENSXETG00000048953	ENSXETG00000048929	ccdc61 (ENSXETG00000024452)	clptm1 (ENSXETG00000033140) #32	relb (ENSXETG00000031521) #31	ENSXETG00000034450	ppp1r37 (ENSXETG00000019084) #27
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000025546	ENSLLEG00000025522	ENSLLEG00000025452	EML2 (ENSLLEG00000025283) #8	GPR4 (ENSLLEG00000025247) #9	OPA3 (ENSLLEG00000025207) #11	VASP (ENSLLEG00000025032) #12	ENSLLEG00000024989	RTN2 (ENSLLEG00000024905) #14	ENSLLEG00000024588	FOSB (ENSLLEG00000024468) #15	ENSLLEG00000024432 #18	PPP1R13L (ENSLLEG00000024038) #19	ERCC2 (ENSLLEG00000023926) #20	ENSLLEG00000023902	CKM (ENSLLEG00000023579) #22	MARK4 (ENSLLEG00000023164) #23	ENSLLEG00000022901 #24	ENSLLEG00000022829	MYPOP (ENSLLEG00000022786)	ENSLLEG00000022748	SYMPK (ENSLLEG00000021981)	ENSLLEG00000021857	ENSLLEG00000021328	ENSLLEG00000021180	NANOS2 (ENSLLEG00000021141)	CLPTM1 (ENSLLEG00000020915) #32	RELB (ENSLLEG00000020791) #31	ENSLLEG00000020767	PPP1R37 (ENSLLEG00000020642) #27	ENSLLEG00000020605 #28
Coelacanth	MODERN SPECIES	324	qpctla (ENSLACG00000006756)	FBXO46 (ENSLACG00000007162)	ENSLACG00000007720	EML2 (ENSLACG00000009810) #8	GPR4 (ENSLACG00000010500) #9	OPA3 (ENSLACG00000011561) #11	VASP (ENSLACG00000011786) #12	FOSB (ENSLACG00000013070) #15	ENSLACG00000013449	ENSLACG00000013574	ENSLACG00000013798 #18	PPP1R13L (ENSLACG00000014022) #19	ERCC2 (ENSLACG00000014155) #20	ENSLACG00000014371	ENSLACG00000022312	CKM (ENSLACG00000014633) #22	MARK4 (ENSLACG00000014767) #23	CCDC9 (ENSLACG00000015361)	SAE1 (ENSLACG00000015982)	ZC3H4 (ENSLACG00000016248)	ENSLACG00000016371	zgc:154093 (ENSLACG00000016524)	ppp1r14ab (ENSLACG00000016603)	ENSLACG00000022177	KCNK6 (ENSLACG00000016730)	ENSLACG00000016768	LTBP4 (ENSLACG00000016869)	ENSLACG00000017469	YIF1B (ENSLACG00000017513)	ENSLACG00000017554	PINK1 (ENSLACG00000017697)