Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00950000183364	ENSGT00960000186612.A.q	ENSGT00960000186612.A.r
Rodentia_B	ANCESTRAL SPECIES	34	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36
Myomorpha	ANCESTRAL SPECIES	39	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36
Muroidea	ANCESTRAL SPECIES	41	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Cricetidae	ANCESTRAL SPECIES	28	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00510000049347 #23	ENSGT00940000161572 #24	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Cricetinae	ANCESTRAL SPECIES	33	ENSGT00940000161908 #7	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00510000049347 #23	ENSGT00940000161572 #24	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Chinese hamster chok1gshd	MODERN SPECIES	271	Tulp2 (ENSCGRG00001019745) #7	Ppp1r15a (ENSCGRG00001015451) #8	Plekha4 (ENSCGRG00001010225) #9	Hsd17b14 (ENSCGRG00001023765) #10	Bcat2 (ENSCGRG00001020863) #11	Fgf21 (ENSCGRG00001019588) #12	Fut1 (ENSCGRG00001007818) #13	Izumo1 (ENSCGRG00001023125) #14	Rasip1 (ENSCGRG00001019991) #15	Mamstr (ENSCGRG00001018713) #16	Sec1 (ENSCGRG00001017314) #17	Ntn5 (ENSCGRG00001011089) #18	Car11 (ENSCGRG00001000167) #19	Dbp (ENSCGRG00001022543) #20	Sphk2 (ENSCGRG00001021837) #21	Rpl18 (ENSCGRG00001018641) #22	Spaca4 (ENSCGRG00001016561) #23	Fam83e (ENSCGRG00001016120) #24	Sult2b1 (ENSCGRG00001020739) #25	Lmtk3 (ENSCGRG00001012481) #26	Cyth2 (ENSCGRG00001020328) #27	Kcnj14 (ENSCGRG00001011792) #28	Grwd1 (ENSCGRG00001010417) #29	Grin2d (ENSCGRG00001004821) #30	ENSCGRG00001020346 #31	Syngr4 (ENSCGRG00001019310) #32	ENSCGRG00001016333 #33	Tmem143 (ENSCGRG00001004118) #34	Emp3 (ENSCGRG00001019827) #35	ENSCGRG00001015977 #36	Abcc6 (ENSCGRG00001019363) #37
Golden Hamster	MODERN SPECIES	792	Nucb1 (ENSMAUG00000010488)	Tulp2 (ENSMAUG00000015493) #7	Ppp1r15a (ENSMAUG00000018033) #8	Plekha4 (ENSMAUG00000022280) #9	Bcat2 (ENSMAUG00000005902) #11	Fgf21 (ENSMAUG00000016333) #12	Fut1 (ENSMAUG00000012734) #13	Izumo1 (ENSMAUG00000012451) #14	Rasip1 (ENSMAUG00000012175) #15	Mamstr (ENSMAUG00000013527) #16	Sec1 (ENSMAUG00000015564) #17	Ntn5 (ENSMAUG00000021896) #18	Car11 (ENSMAUG00000015767) #19	Dbp (ENSMAUG00000000757) #20	Sphk2 (ENSMAUG00000008391) #21	Rpl18 (ENSMAUG00000013578) #22	Spaca4 (ENSMAUG00000007533) #23	Fam83e (ENSMAUG00000010116) #24	Sult2b1 (ENSMAUG00000021525) #25	Lmtk3 (ENSMAUG00000014569) #26	Cyth2 (ENSMAUG00000012287) #27	Kcnj14 (ENSMAUG00000013149) #28	Grwd1 (ENSMAUG00000008728) #29	Grin2d (ENSMAUG00000015271) #30	Kdelr1 (ENSMAUG00000017897) #31	Syngr4 (ENSMAUG00000019444) #32	Tmem143 (ENSMAUG00000021611) #34	Emp3 (ENSMAUG00000011967) #35	ENSMAUG00000017711 #36	ENSMAUG00000019813	Abcc6 (ENSMAUG00000011133) #37
Cricetidae_B	ANCESTRAL SPECIES	31	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES		Ppp1r15a (ENSPEMG00000013886) #8	Plekha4 (ENSPEMG00000015575) #9	Hsd17b14 (ENSPEMG00000010028) #10	Bcat2 (ENSPEMG00000007632) #11	Fgf21 (ENSPEMG00000009357) #12	Fut1 (ENSPEMG00000014188) #13	Izumo1 (ENSPEMG00000012431) #14	Rasip1 (ENSPEMG00000013388) #15	Mamstr (ENSPEMG00000018193) #16	Fut2 (ENSPEMG00000002938) ##13	Sec1 (ENSPEMG00000019118) #17	Ntn5 (ENSPEMG00000018600) #18	Car11 (ENSPEMG00000017340) #19	Dbp (ENSPEMG00000004731) #20	Sphk2 (ENSPEMG00000019272) #21	ENSPEMG00000018716 #22	Fam83e (ENSPEMG00000011008) #24	Spaca4 (ENSPEMG00000006711) #23	Sult2b1 (ENSPEMG00000010051) #25	Lmtk3 (ENSPEMG00000006852) #26	Cyth2 (ENSPEMG00000011516) #27	Kcnj14 (ENSPEMG00000014376) #28	Grwd1 (ENSPEMG00000001252) #29	Grin2d (ENSPEMG00000015228) #30	Kdelr1 (ENSPEMG00000015568) #31	Syngr4 (ENSPEMG00000011020) #32	Tmem143 (ENSPEMG00000015974) #34	Emp3 (ENSPEMG00000027338) #35	ENSPEMG00000014876	ENSPEMG00000024292	ENSPEMG00000030125
Northern American deer mouse	MODERN SPECIES	7	Tmem200a (ENSPEMG00000027804)	Smlr1 (ENSPEMG00000025510)	Epb41l2 (ENSPEMG00000023055)	Akap7 (ENSPEMG00000021361)	Arg1 (ENSPEMG00000007596)	Med23 (ENSPEMG00000022841)	Enpp3 (ENSPEMG00000022836)	Enpp1 (ENSPEMG00000023126)	Ccn2 (ENSPEMG00000023835)	Moxd1 (ENSPEMG00000012508)	Stx7 (ENSPEMG00000023180)	Taar9 (ENSPEMG00000001274)	ENSPEMG00000022170	ENSPEMG00000001531	ENSPEMG00000030926	ENSPEMG00000009617 #22	ENSPEMG00000027399	Taar6 (ENSPEMG00000007048)	Taar5 (ENSPEMG00000001325)	Taar4 (ENSPEMG00000015066)	Taar3 (ENSPEMG00000001193)	Taar2 (ENSPEMG00000020995)	Taar1 (ENSPEMG00000022856)	Vnn1 (ENSPEMG00000021340)	Vnn3 (ENSPEMG00000022899)	ENSPEMG00000030044	Slc18b1 (ENSPEMG00000022014)	Rps12 (ENSPEMG00000021483)	Eya4 (ENSPEMG00000018298)	ENSPEMG00000025804	ENSPEMG00000025529
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	97	Tulp2 (ENSMOCG00000021808) #7	Ppp1r15a (ENSMOCG00000020617) #8	Plekha4 (ENSMOCG00000016379) #9	Hsd17b14 (ENSMOCG00000022913) #10	Bcat2 (ENSMOCG00000019923) #11	Fgf21 (ENSMOCG00000015493) #12	Fut1 (ENSMOCG00000014241) #13	Izumo1 (ENSMOCG00000010279) #14	Rasip1 (ENSMOCG00000000996) #15	Mamstr (ENSMOCG00000020029) #16	Sec1 (ENSMOCG00000017578) #17	Ntn5 (ENSMOCG00000000263) #18	Car11 (ENSMOCG00000011679) #19	Dbp (ENSMOCG00000020895) #20	Sphk2 (ENSMOCG00000015744) #21	ENSMOCG00000016013 #22	Spaca4 (ENSMOCG00000004518) #23	Fam83e (ENSMOCG00000010689) #24	Sult2b1 (ENSMOCG00000004388) #25	Lmtk3 (ENSMOCG00000002724) #26	Cyth2 (ENSMOCG00000009779) #27	Kcnj14 (ENSMOCG00000010655) #28	ENSMOCG00000005367	Grin2d (ENSMOCG00000019653) #30	Kdelr1 (ENSMOCG00000000652) #31	Syngr4 (ENSMOCG00000020597) #32	Tmem143 (ENSMOCG00000012780) #34	Emp3 (ENSMOCG00000006718) #35	ENSMOCG00000010788 #36	Abcc6 (ENSMOCG00000016244) #37	ENSMOCG00000012779
Prairie vole	MODERN SPECIES	6	Plpp1 (ENSMOCG00000012696)	Slc38a9 (ENSMOCG00000020830)	Ddx4 (ENSMOCG00000013250)	Il31ra (ENSMOCG00000003280)	ENSMOCG00000000345	Il6st (ENSMOCG00000000386)	Ankrd55 (ENSMOCG00000016220)	Map3k1 (ENSMOCG00000003771)	Mier3 (ENSMOCG00000014665)	Gpbp1 (ENSMOCG00000001834)	Actbl2 (ENSMOCG00000010587)	Plk2 (ENSMOCG00000012781)	Gapt (ENSMOCG00000021676)	Rab3c (ENSMOCG00000015265)	ENSMOCG00000014174	ENSMOCG00000014373 #22	Pde4d (ENSMOCG00000019003)	Depdc1b (ENSMOCG00000009689)	Elovl7 (ENSMOCG00000012836)	ENSMOCG00000011046	Ercc8 (ENSMOCG00000008038)	Ndufaf2 (ENSMOCG00000018571)	Smim15 (ENSMOCG00000013560)	ENSMOCG00000009003	Zswim6 (ENSMOCG00000016911)	Kif2a (ENSMOCG00000002322)	Dimt1 (ENSMOCG00000014366)	Ipo11 (ENSMOCG00000000236)	ENSMOCG00000000846	Lrrc14b (ENSMOCG00000015632)	Ccdc127 (ENSMOCG00000015017)
Murinae	ANCESTRAL SPECIES		ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Mus	ANCESTRAL SPECIES		ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
Ryukyu mouse	MODERN SPECIES	16	Ppp1r15a (MGP_CAROLIEiJ_G0029725) #8	Plekha4 (MGP_CAROLIEiJ_G0029726) #9	Hsd17b14 (MGP_CAROLIEiJ_G0029727) #10	Bcat2 (MGP_CAROLIEiJ_G0029728) #11	Fgf21 (MGP_CAROLIEiJ_G0029729) #12	Fut1 (MGP_CAROLIEiJ_G0029730) #13	Izumo1 (MGP_CAROLIEiJ_G0029731) #14	Rasip1 (MGP_CAROLIEiJ_G0029732) #15	Mamstr (MGP_CAROLIEiJ_G0029733) #16	Fut2 (MGP_CAROLIEiJ_G0029734) ##13	Sec1 (MGP_CAROLIEiJ_G0029735) #17	Ntn5 (MGP_CAROLIEiJ_G0029736) #18	Car11 (MGP_CAROLIEiJ_G0029737) #19	Dbp (MGP_CAROLIEiJ_G0029738) #20	Sphk2 (MGP_CAROLIEiJ_G0029739) #21	Rpl18 (MGP_CAROLIEiJ_G0029740) #22	Fam83e (MGP_CAROLIEiJ_G0029741) #24	Spaca4 (MGP_CAROLIEiJ_G0029742) #23	Sult2b1 (MGP_CAROLIEiJ_G0029743) #25	Lmtk3 (MGP_CAROLIEiJ_G0029744) #26	Cyth2 (MGP_CAROLIEiJ_G0029745) #27	Kcnj14 (MGP_CAROLIEiJ_G0029746) #28	Grwd1 (MGP_CAROLIEiJ_G0029747) #29	Grin2d (MGP_CAROLIEiJ_G0029748) #30	Kdelr1 (MGP_CAROLIEiJ_G0029749) #31	Syngr4 (MGP_CAROLIEiJ_G0029750) #32	Tmem143 (MGP_CAROLIEiJ_G0029751) #34	Emp3 (MGP_CAROLIEiJ_G0029752) #35	MGP_CAROLIEiJ_G0029753 #36	Abcc6 (MGP_CAROLIEiJ_G0029754) #37	Nomo1 (MGP_CAROLIEiJ_G0029755)
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00950000183364	ENSGT00940000153116.A #36	ENSGT00940000157145 #37
Mouse	MODERN SPECIES	16	Ppp1r15a (ENSMUSG00000040435) #8	Plekha4 (ENSMUSG00000040428) #9	Hsd17b14 (ENSMUSG00000030825) #10	Bcat2 (ENSMUSG00000030826) #11	Fgf21 (ENSMUSG00000030827) #12	Fut1 (ENSMUSG00000008461) #13	Izumo1 (ENSMUSG00000064158) #14	Rasip1 (ENSMUSG00000044562) #15	Mamstr (ENSMUSG00000042918) #16	Fut2 (ENSMUSG00000055978) ##13	Sec1 (ENSMUSG00000040364) #17	Ntn5 (ENSMUSG00000070564) #18	Car11 (ENSMUSG00000003273) #19	Dbp (ENSMUSG00000059824) #20	Sphk2 (ENSMUSG00000057342) #21	Rpl18 (ENSMUSG00000059070) #22	Fam83e (ENSMUSG00000054161) #24	Spaca4 (ENSMUSG00000070563) #23	Sult2b1 (ENSMUSG00000003271) #25	Lmtk3 (ENSMUSG00000062044) #26	Cyth2 (ENSMUSG00000003269) #27	Kcnj14 (ENSMUSG00000058743) #28	Grwd1 (ENSMUSG00000053801) #29	Grin2d (ENSMUSG00000002771) #30	Kdelr1 (ENSMUSG00000002778) #31	Syngr4 (ENSMUSG00000040231) #32	Tmem143 (ENSMUSG00000002781) #34	Emp3 (ENSMUSG00000040212) #35	Odad1 (ENSMUSG00000040189)	Abcc6 (ENSMUSG00000030834) #37	Nomo1 (ENSMUSG00000030835)
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00390000015014 #14	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.a ##13	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36	ENSGT00940000157145 #37	ENSGT00390000000089
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0030823 #8	Plekha4 (MGP_SPRETEiJ_G0030824) #9	Hsd17b14 (MGP_SPRETEiJ_G0030825) #10	Bcat2 (MGP_SPRETEiJ_G0030826) #11	Fgf21 (MGP_SPRETEiJ_G0030827) #12	Fut1 (MGP_SPRETEiJ_G0030828) #13	Izumo1 (MGP_SPRETEiJ_G0030829) #14	Rasip1 (MGP_SPRETEiJ_G0030830) #15	Mamstr (MGP_SPRETEiJ_G0030831) #16	Fut2 (MGP_SPRETEiJ_G0030832) ##13	MGP_SPRETEiJ_G0030833 #17	Ntn5 (MGP_SPRETEiJ_G0030834) #18	Car11 (MGP_SPRETEiJ_G0030835) #19	Dbp (MGP_SPRETEiJ_G0030836) #20	Sphk2 (MGP_SPRETEiJ_G0030837) #21	Rpl18 (MGP_SPRETEiJ_G0030838) #22	Fam83e (MGP_SPRETEiJ_G0030839) #24	Spaca4 (MGP_SPRETEiJ_G0030840) #23	Sult2b1 (MGP_SPRETEiJ_G0030841) #25	MGP_SPRETEiJ_G0030842	Cyth2 (MGP_SPRETEiJ_G0030843) #27	Kcnj14 (MGP_SPRETEiJ_G0030844) #28	Grwd1 (MGP_SPRETEiJ_G0030845) #29	Grin2d (MGP_SPRETEiJ_G0030846) #30	Kdelr1 (MGP_SPRETEiJ_G0030847) #31	Syngr4 (MGP_SPRETEiJ_G0030848) #32	Tmem143 (MGP_SPRETEiJ_G0030849) #34	Emp3 (MGP_SPRETEiJ_G0030850) #35	MGP_SPRETEiJ_G0030851 #36	Abcc6 (MGP_SPRETEiJ_G0030852) #37	Nomo1 (MGP_SPRETEiJ_G0030853)
Steppe mouse	MODERN SPECIES	2865	Ppp1r15a (ENSMSIG00000018891) #8	ENSMSIG00000018839 #9	Hsd17b14 (ENSMSIG00000018792) #10	Bcat2 (ENSMSIG00000018708) #11	Fgf21 (ENSMSIG00000018694) #12	FUT1 (ENSMSIG00000018684) #13	Izumo1 (ENSMSIG00000018668) #14	Rasip1 (ENSMSIG00000018647) #15	Mamstr (ENSMSIG00000018609) #16	Fut2 (ENSMSIG00000018602) ##13	Ntn5 (ENSMSIG00000018441) #18	Sec1 (ENSMSIG00000018425) #17	Car11 (ENSMSIG00000018396) #19	Dbp (ENSMSIG00000018345) #20	Sphk2 (ENSMSIG00000018323) #21	Rpl18 (ENSMSIG00000018122) #22	Spaca4 (ENSMSIG00000018113) #23	Fam83e (ENSMSIG00000018098) #24	ENSMSIG00000018087	Sult2b1 (ENSMSIG00000018027) #25	Lmtk3 (ENSMSIG00000017938) #26	Cyth2 (ENSMSIG00000017872) #27	Kcnj14 (ENSMSIG00000017859) #28	Grwd1 (ENSMSIG00000017822) #29
Shrew mouse	MODERN SPECIES		MGP_PahariEiJ_G0012950 #8	MGP_PahariEiJ_G0012951 #9	Hsd17b14 (MGP_PahariEiJ_G0012952) #10	Bcat2 (MGP_PahariEiJ_G0012953) #11	Fgf21 (MGP_PahariEiJ_G0012954) #12	Fut1 (MGP_PahariEiJ_G0012955) #13	Izumo1 (MGP_PahariEiJ_G0012956) #14	Rasip1 (MGP_PahariEiJ_G0012957) #15	Mamstr (MGP_PahariEiJ_G0012958) #16	Fut2 (MGP_PahariEiJ_G0012959) ##13	Sec1 (MGP_PahariEiJ_G0012960) #17	Ntn5 (MGP_PahariEiJ_G0012961) #18	Car11 (MGP_PahariEiJ_G0012962) #19	Dbp (MGP_PahariEiJ_G0012963) #20	Sphk2 (MGP_PahariEiJ_G0012964) #21	Rpl18 (MGP_PahariEiJ_G0012965) #22	Fam83e (MGP_PahariEiJ_G0012966) #24	Spaca4 (MGP_PahariEiJ_G0012967) #23	Sult2b1 (MGP_PahariEiJ_G0012968) #25	Lmtk3 (MGP_PahariEiJ_G0012969) #26	Cyth2 (MGP_PahariEiJ_G0012970) #27	Kcnj14 (MGP_PahariEiJ_G0012971) #28	Grwd1 (MGP_PahariEiJ_G0012972) #29	Grin2d (MGP_PahariEiJ_G0012973) #30	Kdelr1 (MGP_PahariEiJ_G0012974) #31	Syngr4 (MGP_PahariEiJ_G0012975) #32	Tmem143 (MGP_PahariEiJ_G0012976) #34	Emp3 (MGP_PahariEiJ_G0012977) #35	MGP_PahariEiJ_G0012978 #36	Abcc6 (MGP_PahariEiJ_G0012979) #37	Nomo1 (MGP_PahariEiJ_G0012980)
Rat	MODERN SPECIES		Nucb1 (ENSRNOG00000020889)	Ppp1r15a (ENSRNOG00000020938) #8	Plekha4 (ENSRNOG00000020942) #9	Hsd17b14 (ENSRNOG00000020949) #10	Bcat2 (ENSRNOG00000020956) #11	Fgf21 (ENSRNOG00000020990) #12	Fut1 (ENSRNOG00000020995) #13	Rasip1 (ENSRNOG00000021004) #15	Mamstr (ENSRNOG00000024580) #16	Fut2 (ENSRNOG00000021011) ##13	Sec1 (ENSRNOG00000021014) #17	Ntn5 (ENSRNOG00000021016) #18	Car11 (ENSRNOG00000021017) #19	Dbp (ENSRNOG00000021027) #20	Sphk2 (ENSRNOG00000021032) #21	Rpl18 (ENSRNOG00000021035) #22	Fam83e (ENSRNOG00000021039) #24	Spaca4 (ENSRNOG00000021037) #23	Sult2b1 (ENSRNOG00000021046) #25	Lmtk3 (ENSRNOG00000021048) #26	Cyth2 (ENSRNOG00000021051) #27	Kcnj14 (ENSRNOG00000021056) #28	Grwd1 (ENSRNOG00000021058) #29	Grin2d (ENSRNOG00000021063) #30	Kdelr1 (ENSRNOG00000021082) #31	Syngr4 (ENSRNOG00000021093) #32	Tmem143 (ENSRNOG00000021096) #34	Emp3 (ENSRNOG00000021104) #35	Odad1 (ENSRNOG00000021109) #36	Abcc6 (ENSRNOG00000028781) #37	Nomo1 (ENSRNOG00000021118)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1286	Tulp2 (ENSNGAG00000022361) #7	Ppp1r15a (ENSNGAG00000018135) #8	Plekha4 (ENSNGAG00000021581) #9	Hsd17b14 (ENSNGAG00000020550) #10	Bcat2 (ENSNGAG00000011922) #11	Fgf21 (ENSNGAG00000001613) #12	ENSNGAG00000020124 #14	Rasip1 (ENSNGAG00000024152) #15	Mamstr (ENSNGAG00000016579) #16	Fut2 (ENSNGAG00000014668) ##13	Sec1 (ENSNGAG00000016495) #17	Ntn5 (ENSNGAG00000023287) #18	Car11 (ENSNGAG00000001989) #19	Dbp (ENSNGAG00000018435) #20	Sphk2 (ENSNGAG00000001551) #21	Rpl18 (ENSNGAG00000009552) #22	Spaca4 (ENSNGAG00000014226) #23	Fam83e (ENSNGAG00000018652) #24	Sult2b1 (ENSNGAG00000011474) #25	ENSNGAG00000014718 #26	Cyth2 (ENSNGAG00000022330) #27	Kcnj14 (ENSNGAG00000012678) #28	Grwd1 (ENSNGAG00000019643) #29	Grin2d (ENSNGAG00000018251) #30	Kdelr1 (ENSNGAG00000013167) #31	Syngr4 (ENSNGAG00000022205) #32	Tmem143 (ENSNGAG00000021634) #34	Emp3 (ENSNGAG00000023418) #35	ENSNGAG00000023679 #36	Tram1l1 (ENSNGAG00000014411)
Lesser Egyptian jerboa	MODERN SPECIES	228	ENSJJAG00000014330 #8	Plekha4 (ENSJJAG00000015128) #9	Hsd17b14 (ENSJJAG00000016678) #10	Bcat2 (ENSJJAG00000018529) #11	ENSJJAG00000020409	Fgf21 (ENSJJAG00000014063) #12	ENSJJAG00000015096 #14	Rasip1 (ENSJJAG00000016018) #15	Mamstr (ENSJJAG00000017177) #16	Fut2 (ENSJJAG00000012828) ##13	Sec1 (ENSJJAG00000018179) #17	Ntn5 (ENSJJAG00000019190) #18	Car11 (ENSJJAG00000021321) #19	Dbp (ENSJJAG00000013345) #20	Sphk2 (ENSJJAG00000013451) #21	Rpl18 (ENSJJAG00000014607) #22	Fam83e (ENSJJAG00000018549) #24	Sult2b1 (ENSJJAG00000022150) #25	ENSJJAG00000022595 #26	Grin2d (ENSJJAG00000003385) #30	Cyth2 (ENSJJAG00000005107) #27	Kcnj14 (ENSJJAG00000009884) #28	ENSJJAG00000010111	Kdelr1 (ENSJJAG00000010348) #31	Syngr4 (ENSJJAG00000010621) #32	Tmem143 (ENSJJAG00000012044) #34	Emp3 (ENSJJAG00000012186) #35
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00390000012976.d.x.a.a.a #22
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00390000012976.d.x.a.a.a #22
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00390000001927.b	ENSGT00940000161908 #7	ENSGT00940000154404.a #8	ENSGT00940000161121 #9	ENSGT00940000161346 #10	ENSGT00390000009532.A.d.b #11	ENSGT00940000161866 #12	ENSGT00390000001450.h.b #13	ENSGT00940000160072 #15	ENSGT00940000154181.b #16	ENSGT00390000001450.h.a.a.b #17	ENSGT00940000161874 #18	ENSGT00940000162098 #19	ENSGT00940000162136 #20	ENSGT00940000161197 #21	ENSGT00390000012976.d.x.a.a.a #22	ENSGT00940000161572 #24	ENSGT00510000049347 #23	ENSGT00940000159269.h #25	ENSGT00940000154244.B #26	ENSGT00940000160074 #27	ENSGT01030000234586.B.a.b #28	ENSGT00550000075124 #29	ENSGT00940000159109 #30	ENSGT00390000004010.a.a #31	ENSGT00950000182935.A #32	ENSGT00940000154315.a #34	ENSGT00950000182696.B.b #35	ENSGT00940000153116.A #36
Guinea pig	MODERN SPECIES	70	BAX (ENSCPOG00000037703)	DHDH (ENSCPOG00000011194)	NUCB1 (ENSCPOG00000009433)	PLEKHA4 (ENSCPOG00000008161) #9	HSD17B14 (ENSCPOG00000008153) #10	BCAT2 (ENSCPOG00000012794) #11	FGF21 (ENSCPOG00000000270) #12	FUT1 (ENSCPOG00000030715) #13	RASIP1 (ENSCPOG00000001881) #15	MAMSTR (ENSCPOG00000031881) #16	ENSCPOG00000007337 #17	NTN5 (ENSCPOG00000001878) #18	CA11 (ENSCPOG00000012738) #19	DBP (ENSCPOG00000019616) #20	SPHK2 (ENSCPOG00000035448) #21	ENSCPOG00000026334 #22	FAM83E (ENSCPOG00000032844) #24	SULT2B1 (ENSCPOG00000022158) #25	LMTK3 (ENSCPOG00000013659) #26	CYTH2 (ENSCPOG00000022636) #27	KCNJ14 (ENSCPOG00000026778) #28	GRIN2D (ENSCPOG00000036935) #30	KDELR1 (ENSCPOG00000000425) #31	SYNGR4 (ENSCPOG00000020860) #32	TMEM143 (ENSCPOG00000020531) #34	EMP3 (ENSCPOG00000001785) #35	ENSCPOG00000024178
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00390000012976.d.x.a.a.a #22
Degu	MODERN SPECIES	61	ENSODEG00000011737	ENSODEG00000020039	ENSODEG00000019947	LRPPRC (ENSODEG00000011211)	ABCG8 (ENSODEG00000012555)	ABCG5 (ENSODEG00000010535)	DYNC2LI1 (ENSODEG00000011054)	PLEKHH2 (ENSODEG00000012982)	ENSODEG00000010547	ENSODEG00000012111	HAAO (ENSODEG00000010886)	ENSODEG00000019803	ENSODEG00000011091	ENSODEG00000012097	KCNG3 (ENSODEG00000014536)	ENSODEG00000011166 #22	COX7A2L (ENSODEG00000011433)	EML4 (ENSODEG00000011507)	PKDCC (ENSODEG00000014354)	ENSODEG00000010490	ENSODEG00000019723	ENSODEG00000010136	ENSODEG00000019775	ENSODEG00000009978	SLC8A1 (ENSODEG00000010025)	ENSODEG00000019855	ENSODEG00000010561	TMEM178A (ENSODEG00000010204)	MAP4K3 (ENSODEG00000011426)	CDKL4 (ENSODEG00000010265)	SOS1 (ENSODEG00000012567)