Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155992 #7	ENSGT00390000007989 #8	ENSGT00940000158212.B #10	ENSGT00950000183022.b #11	ENSGT00900000143399 #12	ENSGT00940000162185 #13	ENSGT00940000162889 #14	ENSGT00940000155682 #15	ENSGT00390000005581.a #16	ENSGT00520000055666.b #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00390000011514 #21	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #22	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c #26	ENSGT00940000160846.d #27	ENSGT00940000161054 #28	ENSGT00940000163531 #29	ENSGT00940000161808 #30	ENSGT00390000015147	ENSGT00940000161345 #31	ENSGT00940000156340.a #32	ENSGT00440000038585 #33	ENSGT00530000063156.a.a.b #34	ENSGT00940000155608.q.a.a.a #35	ENSGT00940000162786 #36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000155992 #7	ENSGT00390000007989 #8	ENSGT00940000158212.B #10	ENSGT00950000183022.b #11	ENSGT00900000143399 #12	ENSGT00940000162185 #13	ENSGT00940000162889 #14	ENSGT00940000155682 #15	ENSGT00390000005581.a #16	ENSGT00520000055666.b #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00390000011514 #21	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #22	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c #26	ENSGT00940000160846.d #27	ENSGT00940000161054 #28	ENSGT00940000163531 #29	ENSGT00940000161808 #30	ENSGT00390000015147	ENSGT00940000161345 #31	ENSGT00940000156340.a #32	ENSGT00440000038585 #33	ENSGT00530000063156.a.a.b #34	ENSGT00940000155608.q.a.a.a.a #35	ENSGT00940000162786 #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000015709	ENSGT00940000155992 #7	ENSGT00390000007989 #8	ENSGT00940000158212.B #10	ENSGT00950000183022.b #11	ENSGT00900000143399 #12	ENSGT00940000162185 #13	ENSGT00940000162889 #14	ENSGT00940000155682 #15	ENSGT00390000005581.a #16	ENSGT00520000055666.b #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00390000011514 #21	ENSGT00730000110871.a.a.a.b #22	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c #26	ENSGT00940000160846.d #27	ENSGT00940000161054 #28	ENSGT00940000163531 #29	ENSGT00940000161808 #30	ENSGT00940000161345 #31	ENSGT00940000156340.a #32	ENSGT00440000038585 #33	ENSGT00530000063156.a.a.b #34	ENSGT00940000155608.q.a.a.a.a #35	ENSGT00940000162786 #36	ENSGT00940000161301 #37
spretus	MODERN SPECIES	1	Adarb1 (MGP_SPRETEiJ_G0016294) #7	Pofut2 (MGP_SPRETEiJ_G0016293) #8	MGP_SPRETEiJ_G0016292 #9	Col18a1 (MGP_SPRETEiJ_G0016291) #10	Slc19a1 (MGP_SPRETEiJ_G0016290) #11	MGP_SPRETEiJ_G0016289 #12	Pcbp3 (MGP_SPRETEiJ_G0016288) #13	Col6a1 (MGP_SPRETEiJ_G0016287) #14	Col6a2 (MGP_SPRETEiJ_G0016286) #15	Ftcd (MGP_SPRETEiJ_G0016285) #16	Spatc1l (MGP_SPRETEiJ_G0016284) #17	Lss (MGP_SPRETEiJ_G0016283) #18	Mcm3ap (MGP_SPRETEiJ_G0016282) #19	Ybey (MGP_SPRETEiJ_G0016281) #20	2610028H24Rik (MGP_SPRETEiJ_G0016280) #21	Pcnt (MGP_SPRETEiJ_G0016279) #22	MGP_SPRETEiJ_G0016278 #23	S100b (MGP_SPRETEiJ_G0016277) #24	Prmt2 (MGP_SPRETEiJ_G0016276) #25	Slc5a4a (MGP_SPRETEiJ_G0016275) #26	Slc5a4b (MGP_SPRETEiJ_G0016274) #27	Zfp280b (MGP_SPRETEiJ_G0016273) #28	Gm5134 (MGP_SPRETEiJ_G0016272) #29	Vpreb3 (MGP_SPRETEiJ_G0016271) #30	Chchd10 (MGP_SPRETEiJ_G0016270) #31	Mmp11 (MGP_SPRETEiJ_G0016269) #32	Smarcb1 (MGP_SPRETEiJ_G0016268) #33	Derl3 (MGP_SPRETEiJ_G0016267) #34	Mif (MGP_SPRETEiJ_G0016266) #35	Gstt2 (MGP_SPRETEiJ_G0016265) #36	Gstt4 (MGP_SPRETEiJ_G0016264) #37
Steppe mouse	MODERN SPECIES	2997											ENSMSIG00000003212 #17	Lss (ENSMSIG00000003250) #18	Mcm3ap (ENSMSIG00000003384) #19	ENSMSIG00000003478 #20	2610028H24Rik (ENSMSIG00000003499) #21	Pcnt (ENSMSIG00000003573) #22	Dip2a (ENSMSIG00000004099) #23	S100b (ENSMSIG00000004765) #24	Prmt2 (ENSMSIG00000004778) #25	Slc5a4a (ENSMSIG00000004850) #26	Slc5a4b (ENSMSIG00000004902) #27	ENSMSIG00000004952	Gm5134 (ENSMSIG00000004960) #29	Vpreb3 (ENSMSIG00000005055) #30	Mmp11 (ENSMSIG00000005065) #32	Smarcb1 (ENSMSIG00000005155) #33	Derl3 (ENSMSIG00000005221) #34	ENSMSIG00000005270 ##35	Gstt2 (ENSMSIG00000005282) #36	Gstt4 (ENSMSIG00000005311) #37	Gstt1 (ENSMSIG00000005326)
Mouse	MODERN SPECIES	1	Fam207a (ENSMUSG00000032977)	Adarb1 (ENSMUSG00000020262) #7	Pofut2 (ENSMUSG00000020260) #8	Col18a1 (ENSMUSG00000001435) #10	Slc19a1 (ENSMUSG00000001436) #11	Pcbp3 (ENSMUSG00000001120) #13	Col6a1 (ENSMUSG00000001119) #14	Col6a2 (ENSMUSG00000020241) #15	Ftcd (ENSMUSG00000001155) #16	Spatc1l (ENSMUSG00000009115) #17	Lss (ENSMUSG00000033105) #18	Mcm3ap (ENSMUSG00000001150) #19	Ybey (ENSMUSG00000033126) #20	2610028H24Rik (ENSMUSG00000009114) #21	Gm56118 (ENSMUSG00000117965)	Pcnt (ENSMUSG00000001151) #22	Dip2a (ENSMUSG00000020231) #23	S100b (ENSMUSG00000033208) #24	Prmt2 (ENSMUSG00000020230) #25	Slc5a4a (ENSMUSG00000020229) #26	Slc5a4b (ENSMUSG00000020226) #27	Zfp280b (ENSMUSG00000049764) #28	Gm5134 (ENSMUSG00000033255) #29	Vpreb3 (ENSMUSG00000000903) #30	Gm867 (ENSMUSG00000050157)	Chchd10 (ENSMUSG00000049422) #31	Mmp11 (ENSMUSG00000000901) #32	Smarcb1 (ENSMUSG00000000902) #33	Derl3 (ENSMUSG00000009092) #34	Mif (ENSMUSG00000033307) #35	Gstt2 (ENSMUSG00000033318) #36
Ryukyu mouse	MODERN SPECIES	1	Adarb1 (MGP_CAROLIEiJ_G0015481) #7	Pofut2 (MGP_CAROLIEiJ_G0015480) #8	MGP_CAROLIEiJ_G0015479	Col18a1 (MGP_CAROLIEiJ_G0015478) #10	Slc19a1 (MGP_CAROLIEiJ_G0015477) #11	MGP_CAROLIEiJ_G0015476 #12	Pcbp3 (MGP_CAROLIEiJ_G0015475) #13	Col6a1 (MGP_CAROLIEiJ_G0015474) #14	Col6a2 (MGP_CAROLIEiJ_G0015473) #15	Ftcd (MGP_CAROLIEiJ_G0015472) #16	Spatc1l (MGP_CAROLIEiJ_G0015471) #17	Lss (MGP_CAROLIEiJ_G0015470) #18	Mcm3ap (MGP_CAROLIEiJ_G0015469) #19	Ybey (MGP_CAROLIEiJ_G0015468) #20	2610028H24Rik (MGP_CAROLIEiJ_G0015467) #21	Pcnt (MGP_CAROLIEiJ_G0015466) #22	Dip2a (MGP_CAROLIEiJ_G0015465) #23	S100b (MGP_CAROLIEiJ_G0015464) #24	Prmt2 (MGP_CAROLIEiJ_G0015463) #25	Slc5a4a (MGP_CAROLIEiJ_G0015462) #26	Slc5a4b (MGP_CAROLIEiJ_G0015461) #27	Zfp280b (MGP_CAROLIEiJ_G0015460) #28	Gm5134 (MGP_CAROLIEiJ_G0015459) #29	Vpreb3 (MGP_CAROLIEiJ_G0015458) #30	Chchd10 (MGP_CAROLIEiJ_G0015457) #31	Mmp11 (MGP_CAROLIEiJ_G0015456) #32	Smarcb1 (MGP_CAROLIEiJ_G0015455) #33	Derl3 (MGP_CAROLIEiJ_G0015454) #34	Mif (MGP_CAROLIEiJ_G0015453) #35	Gstt2 (MGP_CAROLIEiJ_G0015452) #36	Gstt4 (MGP_CAROLIEiJ_G0015451) #37