Euteleostomi ANCESTRAL SPECIES 22 ENSGT00940000155168.a.b #7 ENSGT01100000266357 ENSGT00910000144184 #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000009313 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 Sarcopterygii ANCESTRAL SPECIES ENSGT01100000266357 ENSGT00910000144184 #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000009313 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00760000119737 ENSGT01030000234635.a.b.a.a Tetrapoda ANCESTRAL SPECIES 7 ENSGT00910000144184 #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000009313 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a Amniota ANCESTRAL SPECIES 7 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313 ENSGT01030000234590.B.a.b ENSGT00390000000527 ENSGT00390000010184 ENSGT00950000182887.C.a.a.b ENSGT00730000111225 ENSGT00940000155191.b ENSGT00390000009664 ENSGT00390000014721 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 Mammalia ANCESTRAL SPECIES 4 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Theria ANCESTRAL SPECIES ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Eutheria ANCESTRAL SPECIES 5 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000167515 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 Primates ANCESTRAL SPECIES 1 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Simiiformes ANCESTRAL SPECIES 1 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00390000007159 #35 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00390000007159 #35 ENSGT00640000091558 #36 Human MODERN SPECIES 15 NR1D2 (ENSG00000174738) #7 RPL15 (ENSG00000174748) #8 NKIRAS1 (ENSG00000197885) #9 UBE2E1 (ENSG00000170142) #10 UBE2E2 (ENSG00000182247) #11 ZNF385D (ENSG00000151789) #12 SGO1 (ENSG00000129810) #13 KAT2B (ENSG00000114166) #14 PP2D1 (ENSG00000183977) #15 RAB5A (ENSG00000144566) #16 EFHB (ENSG00000163576) #17 KCNH8 (ENSG00000183960) #18 SATB1 (ENSG00000182568) #19 TBC1D5 (ENSG00000131374) #20 PLCL2 (ENSG00000154822) #21 DAZL (ENSG00000092345) #22 RFTN1 (ENSG00000131378) #23 OXNAD1 (ENSG00000154814) #24 DPH3 (ENSG00000154813) #25 GALNT15 (ENSG00000131386) #26 ANKRD28 (ENSG00000206560) #27 BTD (ENSG00000169814) #28 HACL1 (ENSG00000131373) #29 COLQ (ENSG00000206561) #30 EAF1 (ENSG00000144597) #31 METTL6 (ENSG00000206562) #32 SH3BP5 (ENSG00000131370) #33 CAPN7 (ENSG00000131375) #34 RBSN (ENSG00000131381) #35 MRPS25 (ENSG00000131368) #36 NR2C2 (ENSG00000177463) #37 Pan ANCESTRAL SPECIES 2 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00390000007159 #35 ENSGT00640000091558 #36 Chimpanzee MODERN SPECIES 16 UBE2E2 (ENSPTRG00000049783) #11 ENSPTRG00000048984 ZNF385D (ENSPTRG00000014688) #12 SGO1 (ENSPTRG00000014686) #13 KAT2B (ENSPTRG00000014685) #14 PP2D1 (ENSPTRG00000014683) #15 RAB5A (ENSPTRG00000014682) #16 EFHB (ENSPTRG00000014681) #17 KCNH8 (ENSPTRG00000014679) #18 ENSPTRG00000050714 SATB1 (ENSPTRG00000014677) #19 ENSPTRG00000051757 ENSPTRG00000050687 TBC1D5 (ENSPTRG00000014676) #20 PLCL2 (ENSPTRG00000014675) #21 DAZL (ENSPTRG00000014674) #22 ENSPTRG00000048845 RFTN1 (ENSPTRG00000014673) #23 OXNAD1 (ENSPTRG00000014672) #24 DPH3 (ENSPTRG00000051794) #25 GALNT15 (ENSPTRG00000014670) #26 ANKRD28 (ENSPTRG00000030292) #27 BTD (ENSPTRG00000014668) #28 HACL1 (ENSPTRG00000014667) #29 COLQ (ENSPTRG00000030295) #30 EAF1 (ENSPTRG00000014665) #31 METTL6 (ENSPTRG00000030297) #32 ENSPTRG00000051176 SH3BP5 (ENSPTRG00000014662) #33 CAPN7 (ENSPTRG00000014661) #34 RBSN (ENSPTRG00000014659) #35 Bonobo MODERN SPECIES 16 UBE2E1 (ENSPPAG00000039295) #10 UBE2E2 (ENSPPAG00000030208) #11 ENSPPAG00000012676 ZNF385D (ENSPPAG00000039924) #12 ENSPPAG00000034965 #13 KAT2B (ENSPPAG00000040413) #14 PP2D1 (ENSPPAG00000037981) #15 RAB5A (ENSPPAG00000041763) #16 EFHB (ENSPPAG00000027704) #17 KCNH8 (ENSPPAG00000043183) #18 SATB1 (ENSPPAG00000024816) #19 ENSPPAG00000036560 ENSPPAG00000038217 TBC1D5 (ENSPPAG00000033604) #20 PLCL2 (ENSPPAG00000013774) #21 DAZL (ENSPPAG00000037518) #22 ENSPPAG00000020664 RFTN1 (ENSPPAG00000043628) #23 OXNAD1 (ENSPPAG00000036281) #24 DPH3 (ENSPPAG00000032230) #25 GALNT15 (ENSPPAG00000039833) #26 ANKRD28 (ENSPPAG00000041736) #27 BTD (ENSPPAG00000035833) #28 HACL1 (ENSPPAG00000042783) #29 COLQ (ENSPPAG00000031635) #30 EAF1 (ENSPPAG00000039271) #31 METTL6 (ENSPPAG00000039377) #32 SH3BP5 (ENSPPAG00000038360) #33 CAPN7 (ENSPPAG00000032807) #34 RBSN (ENSPPAG00000038220) #35 MRPS25 (ENSPPAG00000039324) #36 Gorilla MODERN SPECIES 16 NKIRAS1 (ENSGGOG00000013354) #9 UBE2E1 (ENSGGOG00000008393) #10 UBE2E2 (ENSGGOG00000040750) #11 ZNF385D (ENSGGOG00000001637) #12 SGO1 (ENSGGOG00000006380) #13 KAT2B (ENSGGOG00000016696) #14 PP2D1 (ENSGGOG00000012034) #15 RAB5A (ENSGGOG00000015981) #16 EFHB (ENSGGOG00000013587) #17 KCNH8 (ENSGGOG00000028470) #18 SATB1 (ENSGGOG00000001779) #19 ENSGGOG00000028241 ENSGGOG00000024653 TBC1D5 (ENSGGOG00000016312) #20 PLCL2 (ENSGGOG00000016029) #21 DAZL (ENSGGOG00000023632) #22 ENSGGOG00000040632 RFTN1 (ENSGGOG00000008885) #23 OXNAD1 (ENSGGOG00000006174) #24 DPH3 (ENSGGOG00000043523) #25 GALNT15 (ENSGGOG00000009285) #26 ANKRD28 (ENSGGOG00000009548) #27 BTD (ENSGGOG00000013932) #28 HACL1 (ENSGGOG00000010802) #29 COLQ (ENSGGOG00000004457) #30 EAF1 (ENSGGOG00000004453) #31 METTL6 (ENSGGOG00000024436) #32 ENSGGOG00000023889 SH3BP5 (ENSGGOG00000001667) #33 CAPN7 (ENSGGOG00000025671) #34 RBSN (ENSGGOG00000012784) #35 Orangutan MODERN SPECIES 16 NR1D2 (ENSPPYG00000014064) #7 RPL15 (ENSPPYG00000014065) ##8 NKIRAS1 (ENSPPYG00000014066) #9 ENSPPYG00000014067 #10 UBE2E2 (ENSPPYG00000014068) #11 ZNF385D (ENSPPYG00000014069) #12 SGO1 (ENSPPYG00000014071) #13 KAT2B (ENSPPYG00000014072) #14 PP2D1 (ENSPPYG00000014073) #15 RAB5A (ENSPPYG00000014074) #16 EFHB (ENSPPYG00000014075) #17 KCNH8 (ENSPPYG00000014076) #18 SATB1 (ENSPPYG00000014077) #19 TBC1D5 (ENSPPYG00000014078) #20 PLCL2 (ENSPPYG00000014079) #21 DAZL (ENSPPYG00000014080) #22 RFTN1 (ENSPPYG00000014081) #23 OXNAD1 (ENSPPYG00000014082) #24 DPH3 (ENSPPYG00000014083) #25 GALNT15 (ENSPPYG00000014084) #26 ANKRD28 (ENSPPYG00000014085) #27 BTD (ENSPPYG00000014086) #28 HACL1 (ENSPPYG00000014087) #29 EAF1 (ENSPPYG00000014089) #31 METTL6 (ENSPPYG00000034493) #32 ENSPPYG00000030473 SH3BP5 (ENSPPYG00000014091) #33 CAPN7 (ENSPPYG00000014092) #34 COL6A5 (ENSPPYG00000030510) COL6A6 (ENSPPYG00000014094) PIK3R4 (ENSPPYG00000014096) Gibbon MODERN SPECIES 23 NPM2 (ENSNLEG00000035765) XPO7 (ENSNLEG00000026557) DOK2 (ENSNLEG00000026541) ENSNLEG00000000770 ENSNLEG00000028452 LZTS1 (ENSNLEG00000000782) ATP6V1B2 (ENSNLEG00000000794) SLC18A1 (ENSNLEG00000000859) KCNH8 (ENSNLEG00000000890) #18 ENSNLEG00000031311 SATB1 (ENSNLEG00000000912) #19 ENSNLEG00000031530 ENSNLEG00000034876 TBC1D5 (ENSNLEG00000000935) #20 PLCL2 (ENSNLEG00000001015) #21 DAZL (ENSNLEG00000033788) #22 RFTN1 (ENSNLEG00000001069) #23 OXNAD1 (ENSNLEG00000001081) #24 DPH3 (ENSNLEG00000034066) #25 GALNT15 (ENSNLEG00000001100) #26 ENSNLEG00000033710 ANKRD28 (ENSNLEG00000001135) #27 BTD (ENSNLEG00000028699) #28 HACL1 (ENSNLEG00000001264) #29 COLQ (ENSNLEG00000028932) #30 EAF1 (ENSNLEG00000001566) #31 METTL6 (ENSNLEG00000001595) #32 ENSNLEG00000034796 SH3BP5 (ENSNLEG00000001617) #33 CAPN7 (ENSNLEG00000001691) #34 COL6A5 (ENSNLEG00000001778) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Vervet Monkey MODERN SPECIES 6 NKIRAS1 (ENSCSAG00000009767) #9 UBE2E1 (ENSCSAG00000009770) #10 UBE2E2 (ENSCSAG00000009772) #11 ENSCSAG00000009780 ZNF385D (ENSCSAG00000009784) #12 SGO1 (ENSCSAG00000009791) #13 KAT2B (ENSCSAG00000009803) #14 PP2D1 (ENSCSAG00000009816) #15 RAB5A (ENSCSAG00000009831) #16 EFHB (ENSCSAG00000009882) #17 ENSCSAG00000009907 ENSCSAG00000009913 #18 SATB1 (ENSCSAG00000009921) #19 TBC1D5 (ENSCSAG00000009930) #20 PLCL2 (ENSCSAG00000009937) #21 DAZL (ENSCSAG00000009976) #22 RFTN1 (ENSCSAG00000010020) #23 OXNAD1 (ENSCSAG00000010052) #24 DPH3 (ENSCSAG00000010060) #25 GALNT15 (ENSCSAG00000010086) #26 ANKRD28 (ENSCSAG00000010110) #27 BTD (ENSCSAG00000010118) #28 HACL1 (ENSCSAG00000010130) #29 EAF1 (ENSCSAG00000010134) #31 METTL6 (ENSCSAG00000010155) #32 SH3BP5 (ENSCSAG00000010160) #33 CAPN7 (ENSCSAG00000010171) #34 ENSCSAG00000010190 COL6A5 (ENSCSAG00000010280) COL6A6 (ENSCSAG00000010431) PIK3R4 (ENSCSAG00000010465) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Macaca ANCESTRAL SPECIES 5 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Pig-tailed macaque MODERN SPECIES 166 PLCL2 (ENSMNEG00000035618) #21 DAZL (ENSMNEG00000038455) #22 RFTN1 (ENSMNEG00000039491) #23 OXNAD1 (ENSMNEG00000035591) #24 ENSMNEG00000042037 DPH3 (ENSMNEG00000026870) #25 GALNT15 (ENSMNEG00000029389) #26 ANKRD28 (ENSMNEG00000041096) #27 BTD (ENSMNEG00000029578) #28 HACL1 (ENSMNEG00000039568) #29 COLQ (ENSMNEG00000040862) #30 EAF1 (ENSMNEG00000037473) #31 METTL6 (ENSMNEG00000035936) #32 SH3BP5 (ENSMNEG00000032860) #33 CAPN7 (ENSMNEG00000037304) #34 ENSMNEG00000039989 ENSMNEG00000031713 Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000155985 #11 ENSGT01050000245398.a.a ENSGT01100000263508.A.d.e.b.b ENSGT01100000263509.a.a.b.b.b.b.a.b.a.b ENSGT00970000197082.b ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 ENSGT00390000016225 Crab-eating macaque MODERN SPECIES 11 ZNF385D (ENSMFAG00000032213) #12 ENSMFAG00000059783 ENSMFAG00000030000 SGO1 (ENSMFAG00000000824) #13 KAT2B (ENSMFAG00000035980) #14 PP2D1 (ENSMFAG00000036979) #15 ENSMFAG00000002326 #16 ENSMFAG00000057146 EFHB (ENSMFAG00000027825) #17 ENSMFAG00000046373 KCNH8 (ENSMFAG00000035903) #18 SATB1 (ENSMFAG00000042093) #19 TBC1D5 (ENSMFAG00000002555) #20 ENSMFAG00000049730 PLCL2 (ENSMFAG00000000647) #21 DAZL (ENSMFAG00000002406) #22 RFTN1 (ENSMFAG00000043580) #23 ENSMFAG00000050326 ENSMFAG00000049115 OXNAD1 (ENSMFAG00000043666) #24 DPH3 (ENSMFAG00000043479) #25 GALNT15 (ENSMFAG00000040291) #26 ENSMFAG00000048777 ANKRD28 (ENSMFAG00000045739) #27 BTD (ENSMFAG00000033539) #28 HACL1 (ENSMFAG00000034241) #29 COLQ (ENSMFAG00000053084) #30 EAF1 (ENSMFAG00000036590) #31 METTL6 (ENSMFAG00000000654) #32 ENSMFAG00000064261 SH3BP5 (ENSMFAG00000062882) #33 Rhesus MODERN SPECIES 11 ENSMMUG00000063874 ENSMMUG00000061903 ENSMMUG00000051275 ZNF385D (ENSMMUG00000009667) #12 ENSMMUG00000063580 SGO1 (ENSMMUG00000020341) #13 KAT2B (ENSMMUG00000020342) #14 PP2D1 (ENSMMUG00000006993) #15 RAB5A (ENSMMUG00000062243) #16 EFHB (ENSMMUG00000018836) #17 KCNH8 (ENSMMUG00000005370) #18 ENSMMUG00000054204 SATB1 (ENSMMUG00000019009) #19 TBC1D5 (ENSMMUG00000023776) #20 PLCL2 (ENSMMUG00000023775) #21 DAZL (ENSMMUG00000011361) #22 RFTN1 (ENSMMUG00000022694) #23 OXNAD1 (ENSMMUG00000022693) #24 DPH3 (ENSMMUG00000022692) #25 GALNT15 (ENSMMUG00000022690) #26 ANKRD28 (ENSMMUG00000021288) #27 BTD (ENSMMUG00000020762) #28 HACL1 (ENSMMUG00000022519) #29 EAF1 (ENSMMUG00000020761) #31 METTL6 (ENSMMUG00000004933) #32 SH3BP5 (ENSMMUG00000006661) #33 CAPN7 (ENSMMUG00000006658) #34 ENSMMUG00000031489 ENSMMUG00000002827 ENSMMUG00000065285 COL6A5 (ENSMMUG00000020377) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 Olive baboon MODERN SPECIES 11 ENSPANG00000044236 ENSPANG00000045561 SGO1 (ENSPANG00000005201) #13 KAT2B (ENSPANG00000015053) #14 PP2D1 (ENSPANG00000017678) #15 RAB5A (ENSPANG00000001328) #16 EFHB (ENSPANG00000002796) #17 KCNH8 (ENSPANG00000010237) #18 ENSPANG00000042126 SATB1 (ENSPANG00000004656) #19 ENSPANG00000044764 TBC1D5 (ENSPANG00000008920) #20 PLCL2 (ENSPANG00000015928) #21 ENSPANG00000051128 ENSPANG00000045263 DAZL (ENSPANG00000015077) #22 RFTN1 (ENSPANG00000008251) #23 OXNAD1 (ENSPANG00000006447) #24 DPH3 (ENSPANG00000012596) #25 GALNT15 (ENSPANG00000011143) #26 ANKRD28 (ENSPANG00000018122) #27 BTD (ENSPANG00000017229) #28 HACL1 (ENSPANG00000012915) #29 COLQ (ENSPANG00000007739) #30 EAF1 (ENSPANG00000006663) #31 METTL6 (ENSPANG00000008253) #32 SH3BP5 (ENSPANG00000006393) #33 CAPN7 (ENSPANG00000007740) #34 COL6A5 (ENSPANG00000008320) COL6A6 (ENSPANG00000016938) PIK3R4 (ENSPANG00000006762) Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000012078.b.d ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000164180 Sooty mangabey MODERN SPECIES 538 UBE2E2 (ENSCATG00000040534) #11 ENSCATG00000020620 ZNF385D (ENSCATG00000033080) #12 SGO1 (ENSCATG00000031797) #13 KAT2B (ENSCATG00000033089) #14 PP2D1 (ENSCATG00000030080) #15 ENSCATG00000033588 #16 EFHB (ENSCATG00000034471) #17 KCNH8 (ENSCATG00000031386) #18 ENSCATG00000040272 SATB1 (ENSCATG00000040637) #19 ENSCATG00000033401 ENSCATG00000033349 TBC1D5 (ENSCATG00000044866) #20 PLCL2 (ENSCATG00000028725) #21 DAZL (ENSCATG00000009078) #22 RFTN1 (ENSCATG00000040094) #23 ENSCATG00000022854 ENSCATG00000033560 DPH3 (ENSCATG00000024833) #25 ENSCATG00000031070 GALNT15 (ENSCATG00000037609) #26 ANKRD28 (ENSCATG00000031374) #27 BTD (ENSCATG00000035945) #28 HACL1 (ENSCATG00000039224) #29 COLQ (ENSCATG00000034663) #30 EAF1 (ENSCATG00000025927) #31 METTL6 (ENSCATG00000038487) #32 SH3BP5 (ENSCATG00000033553) #33 CAPN7 (ENSCATG00000040761) #34 ENSCATG00000035859 Drill MODERN SPECIES 695 ENSMLEG00000042274 SATB1 (ENSMLEG00000036859) #19 ENSMLEG00000014893 TBC1D5 (ENSMLEG00000042528) #20 PLCL2 (ENSMLEG00000000560) #21 DAZL (ENSMLEG00000038997) #22 RFTN1 (ENSMLEG00000034985) #23 ENSMLEG00000042876 OXNAD1 (ENSMLEG00000035297) #24 DPH3 (ENSMLEG00000031053) #25 ENSMLEG00000021537 GALNT15 (ENSMLEG00000038498) #26 ANKRD28 (ENSMLEG00000032794) #27 BTD (ENSMLEG00000013550) #28 HACL1 (ENSMLEG00000037023) #29 COLQ (ENSMLEG00000040921) #30 EAF1 (ENSMLEG00000027766) #31 METTL6 (ENSMLEG00000036079) #32 SH3BP5 (ENSMLEG00000032953) #33 CAPN7 (ENSMLEG00000022967) #34 ENSMLEG00000029398 Rhinopithecus ANCESTRAL SPECIES 272 ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.m.b ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.g #22 ENSGT00530000063609.b #23 ENSGT00910000147226 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Black snub-nosed monkey MODERN SPECIES 21 DAZL (ENSRBIG00000039636) #22 RFTN1 (ENSRBIG00000031445) #23 OXNAD1 (ENSRBIG00000040950) #24 DPH3 (ENSRBIG00000039145) #25 GALNT15 (ENSRBIG00000041660) #26 ANKRD28 (ENSRBIG00000036586) #27 ENSRBIG00000040105 BTD (ENSRBIG00000044461) #28 HACL1 (ENSRBIG00000000662) #29 EAF1 (ENSRBIG00000039147) #31 METTL6 (ENSRBIG00000044482) #32 SH3BP5 (ENSRBIG00000004842) #33 CAPN7 (ENSRBIG00000031389) #34 Golden snub-nosed monkey MODERN SPECIES 2009 SATB1 (ENSRROG00000040418) #19 ENSRROG00000034404 ENSRROG00000039333 TBC1D5 (ENSRROG00000015637) #20 PLCL2 (ENSRROG00000042773) #21 DAZL (ENSRROG00000036493) #22 RFTN1 (ENSRROG00000031054) #23 ENSRROG00000006436 OXNAD1 (ENSRROG00000034825) #24 DPH3 (ENSRROG00000024382) #25 GALNT15 (ENSRROG00000038018) #26 Catarrhini ANCESTRAL SPECIES ENSGT00530000063480.b.h ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00530000063480.b.h ##22 Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00530000063480.b.h.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00530000063480.b.h.a ##22 Macaca ANCESTRAL SPECIES ENSGT00530000063480.b.h.a ##22 Macaca_a ANCESTRAL SPECIES ENSGT00530000063480.b.h.a ##22 Crab-eating macaque MODERN SPECIES 174 ENSMFAG00000061240 ##22 ENSMFAG00000055594 ENSMFAG00000062404 ENSMFAG00000059046 ENSMFAG00000057622 ENSMFAG00000054407 ##22 ENSMFAG00000054020 ENSMFAG00000048100 ENSMFAG00000056918 ENSMFAG00000059356 ENSMFAG00000048008 ENSMFAG00000065739 ENSMFAG00000052765 XKR3 (ENSMFAG00000048309) ENSMFAG00000065658 ENSMFAG00000049576 ENSMFAG00000051695 RPS4Y2 (ENSMFAG00000048442) EIF1AY (ENSMFAG00000052371) KDM5D (ENSMFAG00000063076) ENSMFAG00000055347 Rhesus MODERN SPECIES 328 ENSMMUG00000045289 ##22 ENSMMUG00000057875 ENSMMUG00000049217 ENSMMUG00000038984 ENSMMUG00000041274 ENSMMUG00000041692 ##22 ENSMMUG00000050111 CDY (ENSMMUG00000054832) ENSMMUG00000042062 ENSMMUG00000064248 ENSMMUG00000049379 XKR3 (ENSMMUG00000039089) ENSMMUG00000056138 ENSMMUG00000061536 ENSMMUG00000039261 RPS4Y2 (ENSMMUG00000038824) ENSMMUG00000059478 EIF1AY (ENSMMUG00000043715) ENSMMUG00000057579 KDM5D (ENSMMUG00000045017) CYorf15A (ENSMMUG00000049104) Cercopithecinae ANCESTRAL SPECIES ENSGT00530000063480.b.h.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00530000063480.b.h.b ##22 Macaca ANCESTRAL SPECIES ENSGT00530000063480.b.h.b ##22 Macaca_a ANCESTRAL SPECIES ENSGT00530000063480.b.h.b ##22 Rhesus MODERN SPECIES 328 RPS4Y2 (ENSMMUG00000038824) ENSMMUG00000039261 ENSMMUG00000061536 ENSMMUG00000056138 XKR3 (ENSMMUG00000039089) ENSMMUG00000049379 ENSMMUG00000064248 ENSMMUG00000042062 CDY (ENSMMUG00000054832) ENSMMUG00000050111 ENSMMUG00000041692 ##22 ENSMMUG00000041274 ENSMMUG00000038984 ENSMMUG00000049217 ENSMMUG00000057875 ENSMMUG00000045289 ##22 Crab-eating macaque MODERN SPECIES 174 ENSMFAG00000049576 ENSMFAG00000065658 XKR3 (ENSMFAG00000048309) ENSMFAG00000052765 ENSMFAG00000065739 ENSMFAG00000048008 ENSMFAG00000059356 ENSMFAG00000056918 ENSMFAG00000048100 ENSMFAG00000054020 ENSMFAG00000054407 ##22 ENSMFAG00000057622 ENSMFAG00000059046 ENSMFAG00000062404 ENSMFAG00000055594 ENSMFAG00000061240 ##22 Vervet Monkey MODERN SPECIES 173 ENSCSAG00000017742 ##22 Hominoidea ANCESTRAL SPECIES ENSGT00530000063480.b.h ##22 Hominidae ANCESTRAL SPECIES 5 ENSGT00390000008610.a.b.a.a.a.s.a.a ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00550000076325 ENSGT00530000063480.b.h ##22 ENSGT00940000155106 ENSGT00940000155105 ENSGT00390000008360 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00390000004735.B ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 ENSGT00940000154519.g.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00940000153288.a.a.h.d ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00550000076325 ENSGT00530000063480.b.h ##22 ENSGT00940000155106 ENSGT00940000155105 ENSGT00390000008360 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00390000004735.B ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 ENSGT00940000154519.g.b Homo/Pan group ANCESTRAL SPECIES 71 ENSGT00530000063480.b.h ##22 ENSGT00390000015738.a.a ENSGT00390000001812 Pan ANCESTRAL SPECIES 69 ENSGT00530000063480.b.h ##22 ENSGT00390000015738.a.a ENSGT00390000001812 Chimpanzee DUPLICATION Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 973 ENSPTRG00000043157 ENSPTRG00000045105 ENSPTRG00000046311 ENSPTRG00000051395 ENSPTRG00000047951 ENSPTRG00000050914 ENSPTRG00000044405 ENSPTRG00000051366 ENSPTRG00000050675 ENSPTRG00000043772 ENSPTRG00000050911 ENSPTRG00000047592 ENSPTRG00000047292 ENSPTRG00000049565 ENSPTRG00000050343 ##22 ENSPTRG00000047116 ##22 ENSPTRG00000046061 ENSPTRG00000050054 ENSPTRG00000052554 ENSPTRG00000046839 ENSPTRG00000050036 ENSPTRG00000046971 ENSPTRG00000047735 ENSPTRG00000043749 ENSPTRG00000052104 ENSPTRG00000049088 ENSPTRG00000046270 ENSPTRG00000045853 ENSPTRG00000049123 ENSPTRG00000048471 ENSPTRG00000052074 Chimpanzee MODERN SPECIES 973 ENSPTRG00000048471 ENSPTRG00000049123 ENSPTRG00000045853 ENSPTRG00000046270 ENSPTRG00000049088 ENSPTRG00000052104 ENSPTRG00000043749 ENSPTRG00000047735 ENSPTRG00000046971 ENSPTRG00000050036 ENSPTRG00000046839 ENSPTRG00000052554 ENSPTRG00000050054 ENSPTRG00000046061 ENSPTRG00000047116 ##22 ENSPTRG00000050343 ##22 ENSPTRG00000049565 ENSPTRG00000047292 ENSPTRG00000047592 ENSPTRG00000050911 ENSPTRG00000043772 ENSPTRG00000050675 ENSPTRG00000051366 ENSPTRG00000044405 ENSPTRG00000050914 ENSPTRG00000047951 ENSPTRG00000051395 ENSPTRG00000046311 ENSPTRG00000045105 ENSPTRG00000043157 ENSPTRG00000050564 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 973 ENSPTRG00000050564 ENSPTRG00000034101 ENSPTRG00000044684 ENSPTRG00000050266 ENSPTRG00000049593 ENSPTRG00000048294 ENSPTRG00000047271 ENSPTRG00000047754 ENSPTRG00000046577 ENSPTRG00000050895 ENSPTRG00000047470 ENSPTRG00000046991 ENSPTRG00000046410 ENSPTRG00000048305 ENSPTRG00000028811 ##22 ENSPTRG00000023120 ##22 ENSPTRG00000049508 ENSPTRG00000048181 ENSPTRG00000049675 ENSPTRG00000050854 ENSPTRG00000046062 ENSPTRG00000051154 ENSPTRG00000043529 ENSPTRG00000052575 ENSPTRG00000042791 ENSPTRG00000052644 ENSPTRG00000049908 ENSPTRG00000051781 ENSPTRG00000047530 ENSPTRG00000006812 ENSPTRG00000042298 Chimpanzee MODERN SPECIES 973 ENSPTRG00000006812 ENSPTRG00000047530 ENSPTRG00000051781 ENSPTRG00000049908 ENSPTRG00000052644 ENSPTRG00000042791 ENSPTRG00000052575 ENSPTRG00000043529 ENSPTRG00000051154 ENSPTRG00000046062 ENSPTRG00000050854 ENSPTRG00000049675 ENSPTRG00000048181 ENSPTRG00000049508 ENSPTRG00000023120 ##22 ENSPTRG00000028811 ##22 ENSPTRG00000048305 ENSPTRG00000046410 ENSPTRG00000046991 ENSPTRG00000047470 ENSPTRG00000050895 ENSPTRG00000046577 ENSPTRG00000047754 ENSPTRG00000047271 ENSPTRG00000048294 ENSPTRG00000049593 ENSPTRG00000050266 ENSPTRG00000044684 ENSPTRG00000034101 ENSPTRG00000050564 ENSPTRG00000043157 Human DUPLICATION Human DUPLICATION Human MODERN SPECIES 1828 HSFY1 (ENSG00000172468) HSFY2 (ENSG00000169953) KDM5D (ENSG00000012817) EIF1AY (ENSG00000198692) RPS4Y2 (ENSG00000280969) RBMY1B (ENSG00000242875) RBMY1A1 (ENSG00000234414) RBMY1D (ENSG00000244395) RBMY1E (ENSG00000242389) PRY2 (ENSG00000169807) RBMY1F (ENSG00000169800) RBMY1J (ENSG00000226941) PRY (ENSG00000169789) BPY2 (ENSG00000183753) DAZ1 (ENSG00000188120) ##22 DAZ2 (ENSG00000205944) ##22 CDY1B (ENSG00000172352) BPY2B (ENSG00000183795) DAZ3 (ENSG00000187191) ##22 DAZ4 (ENSG00000205916) ##22 BPY2C (ENSG00000185894) CDY1 (ENSG00000172288) VAMP7 (ENSG00000292366) IL9R (ENSG00000292373) WASH6P (ENSG00000292372) Human MODERN SPECIES 1828 RPS4Y2 (ENSG00000280969) RBMY1B (ENSG00000242875) RBMY1A1 (ENSG00000234414) RBMY1D (ENSG00000244395) RBMY1E (ENSG00000242389) PRY2 (ENSG00000169807) RBMY1F (ENSG00000169800) RBMY1J (ENSG00000226941) PRY (ENSG00000169789) BPY2 (ENSG00000183753) DAZ1 (ENSG00000188120) ##22 DAZ2 (ENSG00000205944) ##22 CDY1B (ENSG00000172352) BPY2B (ENSG00000183795) DAZ3 (ENSG00000187191) ##22 DAZ4 (ENSG00000205916) ##22 BPY2C (ENSG00000185894) CDY1 (ENSG00000172288) VAMP7 (ENSG00000292366) IL9R (ENSG00000292373) WASH6P (ENSG00000292372) Human DUPLICATION Human MODERN SPECIES 1828 WASH6P (ENSG00000292372) IL9R (ENSG00000292373) VAMP7 (ENSG00000292366) CDY1 (ENSG00000172288) BPY2C (ENSG00000185894) DAZ4 (ENSG00000205916) ##22 DAZ3 (ENSG00000187191) ##22 BPY2B (ENSG00000183795) CDY1B (ENSG00000172352) DAZ2 (ENSG00000205944) ##22 DAZ1 (ENSG00000188120) ##22 BPY2 (ENSG00000183753) PRY (ENSG00000169789) RBMY1J (ENSG00000226941) RBMY1F (ENSG00000169800) PRY2 (ENSG00000169807) RBMY1E (ENSG00000242389) RBMY1D (ENSG00000244395) RBMY1A1 (ENSG00000234414) RBMY1B (ENSG00000242875) RPS4Y2 (ENSG00000280969) EIF1AY (ENSG00000198692) KDM5D (ENSG00000012817) HSFY2 (ENSG00000169953) HSFY1 (ENSG00000172468) CDY2A (ENSG00000182415) Human MODERN SPECIES 1828 WASH6P (ENSG00000292372) IL9R (ENSG00000292373) VAMP7 (ENSG00000292366) CDY1 (ENSG00000172288) BPY2C (ENSG00000185894) DAZ4 (ENSG00000205916) ##22 DAZ3 (ENSG00000187191) ##22 BPY2B (ENSG00000183795) CDY1B (ENSG00000172352) DAZ2 (ENSG00000205944) ##22 DAZ1 (ENSG00000188120) ##22 BPY2 (ENSG00000183753) PRY (ENSG00000169789) RBMY1J (ENSG00000226941) RBMY1F (ENSG00000169800) PRY2 (ENSG00000169807) RBMY1E (ENSG00000242389) RBMY1D (ENSG00000244395) RBMY1A1 (ENSG00000234414) RBMY1B (ENSG00000242875) RPS4Y2 (ENSG00000280969) EIF1AY (ENSG00000198692) Platyrrhini ANCESTRAL SPECIES 22 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.j.a ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Cebidae ANCESTRAL SPECIES 22 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.j.a ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Cebidae_a ANCESTRAL SPECIES 12 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000154295.y.a.b ENSGT00390000017004.a.b.j.a ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 ENSGT00390000016225 Bolivian squirrel monkey MODERN SPECIES 54 UBE2E1 (ENSSBOG00000027996) #10 UBE2E2 (ENSSBOG00000025386) #11 ZNF385D (ENSSBOG00000026634) #12 ENSSBOG00000033417 ENSSBOG00000034156 #13 KAT2B (ENSSBOG00000028858) #14 PP2D1 (ENSSBOG00000027219) #15 RAB5A (ENSSBOG00000028989) #16 EFHB (ENSSBOG00000020861) #17 ENSSBOG00000023738 KCNH8 (ENSSBOG00000029678) #18 SATB1 (ENSSBOG00000019471) #19 ENSSBOG00000035188 TBC1D5 (ENSSBOG00000018924) #20 PLCL2 (ENSSBOG00000026576) #21 ENSSBOG00000033845 #22 RFTN1 (ENSSBOG00000022881) #23 OXNAD1 (ENSSBOG00000022408) #24 ENSSBOG00000026042 #25 GALNT15 (ENSSBOG00000033864) #26 ANKRD28 (ENSSBOG00000020685) #27 BTD (ENSSBOG00000010141) #28 HACL1 (ENSSBOG00000032071) #29 EAF1 (ENSSBOG00000029911) #31 METTL6 (ENSSBOG00000029385) #32 SH3BP5 (ENSSBOG00000022481) #33 CAPN7 (ENSSBOG00000025768) #34 EIF5A2 (ENSSBOG00000020577) ENSSBOG00000022346 CLDN11 (ENSSBOG00000033006) SLC7A14 (ENSSBOG00000021295) Capuchin MODERN SPECIES 24 ZNF385D (ENSCCAG00000026103) #12 ENSCCAG00000033632 SGO1 (ENSCCAG00000023636) #13 KAT2B (ENSCCAG00000024272) #14 PP2D1 (ENSCCAG00000037244) #15 RAB5A (ENSCCAG00000022405) #16 ENSCCAG00000035359 EFHB (ENSCCAG00000026456) #17 KCNH8 (ENSCCAG00000025449) #18 SATB1 (ENSCCAG00000022150) #19 ENSCCAG00000024995 ENSCCAG00000026605 ENSCCAG00000027964 TBC1D5 (ENSCCAG00000035716) #20 PLCL2 (ENSCCAG00000033228) #21 ENSCCAG00000035747 #22 RFTN1 (ENSCCAG00000024706) #23 OXNAD1 (ENSCCAG00000024384) #24 DPH3 (ENSCCAG00000035148) #25 GALNT15 (ENSCCAG00000030762) #26 ENSCCAG00000035196 ANKRD28 (ENSCCAG00000000718) #27 BTD (ENSCCAG00000030979) #28 HACL1 (ENSCCAG00000026710) #29 COLQ (ENSCCAG00000037774) #30 EAF1 (ENSCCAG00000037268) #31 METTL6 (ENSCCAG00000026438) #32 Marmoset MODERN SPECIES 8 ENSCJAG00000083714 ENSCJAG00000081001 SGO1 (ENSCJAG00000003760) #13 KAT2B (ENSCJAG00000003744) #14 ENSCJAG00000086623 PP2D1 (ENSCJAG00000003735) #15 RAB5A (ENSCJAG00000048394) #16 EFHB (ENSCJAG00000003700) #17 ENSCJAG00000069755 KCNH8 (ENSCJAG00000003681) #18 SATB1 (ENSCJAG00000003645) #19 ENSCJAG00000078805 TBC1D5 (ENSCJAG00000003617) #20 PLCL2 (ENSCJAG00000003599) #21 ENSCJAG00000070689 DAZL (ENSCJAG00000039120) #22 RFTN1 (ENSCJAG00000003585) #23 OXNAD1 (ENSCJAG00000003582) #24 DPH3 (ENSCJAG00000072075) #25 ENSCJAG00000072992 GALNT15 (ENSCJAG00000003566) #26 ANKRD28 (ENSCJAG00000003502) #27 BTD (ENSCJAG00000003498) #28 HACL1 (ENSCJAG00000003426) #29 EAF1 (ENSCJAG00000043266) #31 METTL6 (ENSCJAG00000003415) #32 SH3BP5 (ENSCJAG00000080725) #33 CAPN7 (ENSCJAG00000003376) #34 ENSCJAG00000060750 COL6A5 (ENSCJAG00000003344) COL6A6 (ENSCJAG00000003330) Mas night monkey MODERN SPECIES 309 NKIRAS1 (ENSANAG00000022566) #9 UBE2E1 (ENSANAG00000034758) #10 UBE2E2 (ENSANAG00000030198) #11 ZNF385D (ENSANAG00000037942) #12 SGO1 (ENSANAG00000031972) #13 ENSANAG00000031028 #14 PP2D1 (ENSANAG00000022659) #15 ENSANAG00000025120 #16 EFHB (ENSANAG00000014717) #17 KCNH8 (ENSANAG00000033965) #18 SATB1 (ENSANAG00000034492) #19 ENSANAG00000023732 ENSANAG00000033391 TBC1D5 (ENSANAG00000032290) #20 PLCL2 (ENSANAG00000028813) #21 ENSANAG00000034405 #22 RFTN1 (ENSANAG00000019087) #23 OXNAD1 (ENSANAG00000033629) #24 DPH3 (ENSANAG00000031816) #25 GALNT15 (ENSANAG00000026907) #26 ANKRD28 (ENSANAG00000031839) #27 ENSANAG00000023863 #28 HACL1 (ENSANAG00000022352) #29 COLQ (ENSANAG00000028274) #30 EAF1 (ENSANAG00000025167) #31 ENSANAG00000024487 #32 SH3BP5 (ENSANAG00000037138) #33 CAPN7 (ENSANAG00000024102) #34 ENSANAG00000022047 COL6A5 (ENSANAG00000020296) COL6A6 (ENSANAG00000026328) Tarsier MODERN SPECIES 1165 ENSTSYG00000000788 #22 ENSTSYG00000036312 #23 OXNAD1 (ENSTSYG00000012754) #24 DPH3 (ENSTSYG00000035859) #25 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00390000008096.E.b ##19 ENSGT00390000008096.E.a ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Lemuriformes ANCESTRAL SPECIES 30 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00390000008096.E.b ##19 ENSGT00390000008096.E.a ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 Mouse lemur MODERN SPECIES UBE2E1 (ENSMICG00000048911) #10 UBE2E2 (ENSMICG00000049547) #11 ZNF385D (ENSMICG00000049193) #12 SGO1 (ENSMICG00000049414) #13 KAT2B (ENSMICG00000049426) #14 PP2D1 (ENSMICG00000048941) #15 RAB5A (ENSMICG00000049130) #16 EFHB (ENSMICG00000049240) #17 ENSMICG00000049539 KCNH8 (ENSMICG00000049082) #18 ENSMICG00000049466 ENSMICG00000049113 ##19 ENSMICG00000049072 ##19 TBC1D5 (ENSMICG00000049088) #20 PLCL2 (ENSMICG00000049502) #21 ENSMICG00000049389 #22 ENSMICG00000049245 RFTN1 (ENSMICG00000049449) #23 OXNAD1 (ENSMICG00000049273) #24 ENSMICG00000048866 DPH3 (ENSMICG00000049463) #25 GALNT15 (ENSMICG00000049267) #26 ENSMICG00000048918 ANKRD28 (ENSMICG00000048989) #27 BTD (ENSMICG00000049329) #28 HACL1 (ENSMICG00000049455) #29 ENSMICG00000048874 COLQ (ENSMICG00000049255) #30 EAF1 (ENSMICG00000048930) #31 ENSMICG00000048914 ENSMICG00000049001 #33 Lemuriformes_a ANCESTRAL SPECIES 53 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 ENSGT00390000016225 Greater bamboo lemur MODERN SPECIES 134 TBC1D5 (ENSPSMG00000008857) #20 PLCL2 (ENSPSMG00000008999) #21 ENSPSMG00000009049 #22 RFTN1 (ENSPSMG00000009111) #23 OXNAD1 (ENSPSMG00000009164) #24 DPH3 (ENSPSMG00000009196) #25 GALNT15 (ENSPSMG00000009213) #26 ANKRD28 (ENSPSMG00000009271) #27 BTD (ENSPSMG00000009312) #28 HACL1 (ENSPSMG00000009541) #29 COLQ (ENSPSMG00000009807) #30 EAF1 (ENSPSMG00000009851) #31 METTL6 (ENSPSMG00000009871) #32 SH3BP5 (ENSPSMG00000009896) #33 CAPN7 (ENSPSMG00000009974) #34 ENSPSMG00000009992 Bushbaby MODERN SPECIES 117 ENSOGAG00000031261 ZNF385D (ENSOGAG00000015958) #12 ENSOGAG00000029509 SGO1 (ENSOGAG00000016786) #13 KAT2B (ENSOGAG00000016781) #14 PP2D1 (ENSOGAG00000007917) #15 RAB5A (ENSOGAG00000003948) #16 EFHB (ENSOGAG00000003944) #17 ENSOGAG00000027211 KCNH8 (ENSOGAG00000000804) #18 SATB1 (ENSOGAG00000015441) #19 ENSOGAG00000025343 ENSOGAG00000030351 TBC1D5 (ENSOGAG00000016352) #20 PLCL2 (ENSOGAG00000030914) #21 ENSOGAG00000006983 #22 RFTN1 (ENSOGAG00000014420) #23 OXNAD1 (ENSOGAG00000014419) #24 DPH3 (ENSOGAG00000034296) #25 GALNT15 (ENSOGAG00000014413) #26 ANKRD28 (ENSOGAG00000013981) #27 BTD (ENSOGAG00000013977) #28 HACL1 (ENSOGAG00000013969) #29 COLQ (ENSOGAG00000013967) #30 EAF1 (ENSOGAG00000013964) #31 METTL6 (ENSOGAG00000013962) #32 SH3BP5 (ENSOGAG00000013959) #33 CAPN7 (ENSOGAG00000013951) #34 ENSOGAG00000032781 COL6A5 (ENSOGAG00000028058) COL6A6 (ENSOGAG00000007814) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000167515 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 10068 ENSTBEG00000014941 #22 Tree shrew MODERN SPECIES 1391 ENSTBEG00000012225 #22 ENSTBEG00000012002 #23 OXNAD1 (ENSTBEG00000011749) #24 ENSTBEG00000011675 #25 GALNT15 (ENSTBEG00000011226) #26 Glires ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000167515 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 Lagomorpha ANCESTRAL SPECIES ENSGT00530000063480.b #22 Pika MODERN SPECIES 5161 ENSOPRG00000001387 #22 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000167515 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000154791 ENSGT00940000156388 Kangaroo rat MODERN SPECIES 379 ENSDORG00000014556 ENSDORG00000027020 ENSDORG00000028975 ENSDORG00000027946 #13 ENSDORG00000028910 #14 ENSDORG00000023947 #14 Pp2d1 (ENSDORG00000024799) #15 ENSDORG00000024958 #16 Efhb (ENSDORG00000009402) #17 ENSDORG00000023871 Kcnh8 (ENSDORG00000010205) #18 Satb1 (ENSDORG00000005578) #19 Tbc1d5 (ENSDORG00000001677) #20 Plcl2 (ENSDORG00000004496) #21 ENSDORG00000024181 Dazl (ENSDORG00000011497) #22 ENSDORG00000027840 #23 ENSDORG00000024452 #23 Oxnad1 (ENSDORG00000011643) #24 ENSDORG00000011642 #25 Galnt15 (ENSDORG00000011640) #26 Ankrd28 (ENSDORG00000002191) #27 Btd (ENSDORG00000008251) #28 Hacl1 (ENSDORG00000008247) #29 Colq (ENSDORG00000014117) #30 Eaf1 (ENSDORG00000027979) #31 Mettl6 (ENSDORG00000014113) #32 Myomorpha ANCESTRAL SPECIES 49 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00900000143613 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000154791 ENSGT00940000156388 Lesser Egyptian jerboa MODERN SPECIES 82 ENSJJAG00000016630 #12 ENSJJAG00000018004 #13 ENSJJAG00000012104 #14 ENSJJAG00000020894 #14 Rab5a (ENSJJAG00000020190) #16 Efhb (ENSJJAG00000023722) #17 Kcnh8 (ENSJJAG00000011433) #18 Satb1 (ENSJJAG00000011907) #19 Tbc1d5 (ENSJJAG00000020820) #20 Plcl2 (ENSJJAG00000016157) #21 Dazl (ENSJJAG00000010767) #22 ENSJJAG00000010277 #23 ENSJJAG00000018830 #23 ENSJJAG00000017236 ENSJJAG00000013287 #25 Galnt15 (ENSJJAG00000019499) #26 Ankrd28 (ENSJJAG00000005228) #27 Btd (ENSJJAG00000020488) #28 Hacl1 (ENSJJAG00000018292) #29 Colq (ENSJJAG00000012436) #30 ENSJJAG00000014692 Eaf1 (ENSJJAG00000019409) #31 Mettl6 (ENSJJAG00000018567) #32 ENSJJAG00000014685 Sh3bp5 (ENSJJAG00000014182) #33 Capn7 (ENSJJAG00000019584) #34 Muroidea ANCESTRAL SPECIES 55 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000154791 ENSGT00940000156388 ENSGT00950000182865.a Upper Galilee mountains blind mole rat MODERN SPECIES 1513 Kcnh8 (ENSNGAG00000013207) #18 Satb1 (ENSNGAG00000020340) #19 Tbc1d5 (ENSNGAG00000018813) #20 Plcl2 (ENSNGAG00000023127) #21 ENSNGAG00000020385 Dazl (ENSNGAG00000009472) #22 ENSNGAG00000014161 #23 ENSNGAG00000015104 #23 Oxnad1 (ENSNGAG00000019562) #24 ENSNGAG00000015855 Galnt15 (ENSNGAG00000017514) #26 Ankrd28 (ENSNGAG00000015942) #27 Btd (ENSNGAG00000013985) #28 Hacl1 (ENSNGAG00000014477) #29 Colq (ENSNGAG00000019455) #30 Eaf1 (ENSNGAG00000008079) #31 Mettl6 (ENSNGAG00000015822) #32 Sh3bp5 (ENSNGAG00000018171) #33 Capn7 (ENSNGAG00000000411) #34 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000162681 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a Cricetidae_B ANCESTRAL SPECIES 32 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000162681 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a Prairie vole MODERN SPECIES 219 Plcl2 (ENSMOCG00000017643) #21 Dazl (ENSMOCG00000016627) #22 Northern American deer mouse MODERN SPECIES 13 Cd2ap (ENSPEMG00000013997) Adgrf2 (ENSPEMG00000016659) Adgrf4 (ENSPEMG00000012424) Opn5 (ENSPEMG00000022219) Ptchd4 (ENSPEMG00000023455) Sgo1 (ENSPEMG00000013004) #13 Pp2d1 (ENSPEMG00000019407) #15 Rab5a (ENSPEMG00000029423) #16 Efhb (ENSPEMG00000020099) #17 ENSPEMG00000031002 Kcnh8 (ENSPEMG00000021076) #18 ENSPEMG00000004477 Satb1 (ENSPEMG00000019744) #19 Tbc1d5 (ENSPEMG00000019337) #20 ENSPEMG00000019815 #21 Dazl (ENSPEMG00000019679) #22 Rftn1 (ENSPEMG00000010897) #23 ENSPEMG00000025845 Kif6 (ENSPEMG00000013628) Daam2 (ENSPEMG00000001066) Mocs1 (ENSPEMG00000023108) Lrfn2 (ENSPEMG00000019605) Unc5cl (ENSPEMG00000011269) Tspo2 (ENSPEMG00000010280) Apobec2 (ENSPEMG00000005724) Oard1 (ENSPEMG00000024978) Nfya (ENSPEMG00000012280) Treml1 (ENSPEMG00000012297) Trem2 (ENSPEMG00000013350) ENSPEMG00000001398 ENSPEMG00000016786 Cricetinae ANCESTRAL SPECIES 28 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000162681 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a Chinese hamster chok1gshd MODERN SPECIES 184 ENSCGRG00001022014 ENSCGRG00001022886 #16 ENSCGRG00001024265 ENSCGRG00001000093 Sgo1 (ENSCGRG00001021224) #13 Kat2b (ENSCGRG00001006983) #14 Pp2d1 (ENSCGRG00001019391) #15 ENSCGRG00001020018 #16 ENSCGRG00001004203 Efhb (ENSCGRG00001007930) #17 ENSCGRG00001001002 Kcnh8 (ENSCGRG00001023448) #18 Satb1 (ENSCGRG00001012162) #19 Tbc1d5 (ENSCGRG00001012430) #20 Plcl2 (ENSCGRG00001019852) #21 Dazl (ENSCGRG00001021961) #22 Rftn1 (ENSCGRG00001005272) #23 ENSCGRG00001015490 Kif6 (ENSCGRG00001021327) Daam2 (ENSCGRG00001016238) Mocs1 (ENSCGRG00001021044) Lrfn2 (ENSCGRG00001023899) ENSCGRG00001016038 Unc5cl (ENSCGRG00001020057) Tspo2 (ENSCGRG00001011008) Apobec2 (ENSCGRG00001014983) Oard1 (ENSCGRG00001019722) Nfya (ENSCGRG00001008539) Treml1 (ENSCGRG00001003109) Trem2 (ENSCGRG00001004763) ENSCGRG00001010441 Golden Hamster MODERN SPECIES 649 Sgo1 (ENSMAUG00000013572) #13 Kat2b (ENSMAUG00000013162) #14 Pp2d1 (ENSMAUG00000012292) #15 Rab5a (ENSMAUG00000011242) #16 Efhb (ENSMAUG00000009772) #17 Kcnh8 (ENSMAUG00000004139) #18 ENSMAUG00000000482 ##19 ENSMAUG00000000207 ##19 ENSMAUG00000019938 Tbc1d5 (ENSMAUG00000012827) #20 Plcl2 (ENSMAUG00000008046) #21 Dazl (ENSMAUG00000018931) #22 Rftn1 (ENSMAUG00000017586) #23 Kif6 (ENSMAUG00000016153) Daam2 (ENSMAUG00000011180) Mocs1 (ENSMAUG00000009643) Lrfn2 (ENSMAUG00000008478) Unc5cl (ENSMAUG00000006999) Tspo2 (ENSMAUG00000000293) Apobec2 (ENSMAUG00000011016) Nfya (ENSMAUG00000019965) Treml1 (ENSMAUG00000019166) Trem2 (ENSMAUG00000018601) ENSMAUG00000009298 Treml2 (ENSMAUG00000007921) Treml4 (ENSMAUG00000003024) Trem1 (ENSMAUG00000001065) Murinae ANCESTRAL SPECIES 9 ENSGT00390000018285.b ENSGT00950000183069.b.b.a.b.c.a.b.a.b ENSGT00940000158714 ENSGT00690000101915 ENSGT00940000160996 ENSGT00940000160912 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a Mus ANCESTRAL SPECIES 16 ENSGT00390000018285.b ENSGT00950000183069.b.b.a.b.c.a.b.a.b ENSGT00940000158714 ENSGT00690000101915 ENSGT00940000160996 ENSGT00940000160912 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a Mus_A ANCESTRAL SPECIES 10 ENSGT00940000162163 ENSGT00390000018285.b ENSGT00940000158714 ENSGT00690000101915 ENSGT00940000160996 ENSGT00940000160912 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d.i ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a Mus_B ANCESTRAL SPECIES 9 ENSGT00390000018285.b ENSGT00950000183069.b.b.a.b.c.a.b.a.b ENSGT00940000158714 ENSGT00690000101915 ENSGT00940000160996 ENSGT00940000160912 ENSGT00940000154107.a #13 ENSGT00940000154995.q.a #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d.i ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a Mouse MODERN SPECIES 8 Pot1b (ENSMUSG00000024174) Vmn2r118 (ENSMUSG00000091504) St6gal2 (ENSMUSG00000024172) Slc5a7 (ENSMUSG00000023945) Sult1c1 (ENSMUSG00000023943) Sult1c2 (ENSMUSG00000023122) Sgo1 (ENSMUSG00000023940) #13 Kat2b (ENSMUSG00000000708) #14 Pp2d1 (ENSMUSG00000044957) #15 Rab5a (ENSMUSG00000017831) #16 Efhb (ENSMUSG00000023931) #17 Kcnh8 (ENSMUSG00000035580) #18 Satb1 (ENSMUSG00000023927) #19 Tbc1d5 (ENSMUSG00000023923) #20 Plcl2 (ENSMUSG00000038910) #21 Dazl (ENSMUSG00000010592) #22 Rftn1 (ENSMUSG00000039316) #23 Kif6 (ENSMUSG00000023999) Daam2 (ENSMUSG00000040260) Mocs1 (ENSMUSG00000064120) Lrfn2 (ENSMUSG00000040490) Unc5cl (ENSMUSG00000043592) Tspo2 (ENSMUSG00000023995) Apobec2 (ENSMUSG00000040694) Oard1 (ENSMUSG00000040771) Nfya (ENSMUSG00000023994) Treml1 (ENSMUSG00000023993) Trem2 (ENSMUSG00000023992) B430306N03Rik (ENSMUSG00000043740) Treml2 (ENSMUSG00000071068) Treml4 (ENSMUSG00000051682) Mus_C ANCESTRAL SPECIES 9 ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.a.b ENSGT00940000162163 ENSGT00390000018285.b ENSGT00940000158714 ENSGT00690000101915 ENSGT00940000160996 ENSGT00940000154107.a #13 ENSGT00940000154995.q.a #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00940000157697 ENSGT00940000157801 ENSGT00390000016567 ENSGT00940000156417 ENSGT00950000182815.b ENSGT00390000012980.b ENSGT00940000156616 ENSGT00390000006988 ENSGT00390000015714 ENSGT00470000042300 ENSGT00470000042297 ENSGT00940000153835.a.b.d.i ENSGT00940000153835.a.a ENSGT00940000153835.a.b.c.a.a spretus MODERN SPECIES 8 Adgre4 (MGP_SPRETEiJ_G0022662) Pot1b (MGP_SPRETEiJ_G0022661) Vmn2r118 (MGP_SPRETEiJ_G0022660) St6gal2 (MGP_SPRETEiJ_G0022659) MGP_SPRETEiJ_G0022658 Slc5a7 (MGP_SPRETEiJ_G0022657) Sult1c2 (MGP_SPRETEiJ_G0022656) Sgo1 (MGP_SPRETEiJ_G0022655) #13 Kat2b (MGP_SPRETEiJ_G0022654) #14 Rab5a (MGP_SPRETEiJ_G0022653) #16 Efhb (MGP_SPRETEiJ_G0022652) #17 Kcnh8 (MGP_SPRETEiJ_G0022651) #18 Satb1 (MGP_SPRETEiJ_G0022650) #19 Tbc1d5 (MGP_SPRETEiJ_G0022649) #20 Plcl2 (MGP_SPRETEiJ_G0022648) #21 Dazl (MGP_SPRETEiJ_G0022647) #22 Rftn1 (MGP_SPRETEiJ_G0022646) #23 Kif6 (MGP_SPRETEiJ_G0022645) Daam2 (MGP_SPRETEiJ_G0022644) Mocs1 (MGP_SPRETEiJ_G0022643) Lrfn2 (MGP_SPRETEiJ_G0022642) Unc5cl (MGP_SPRETEiJ_G0022641) Tspo2 (MGP_SPRETEiJ_G0022640) Apobec2 (MGP_SPRETEiJ_G0022639) Oard1 (MGP_SPRETEiJ_G0022638) Nfya (MGP_SPRETEiJ_G0022637) Treml1 (MGP_SPRETEiJ_G0022636) Trem2 (MGP_SPRETEiJ_G0022635) MGP_SPRETEiJ_G0022634 Treml2 (MGP_SPRETEiJ_G0022633) Treml4 (MGP_SPRETEiJ_G0022632) Steppe mouse MODERN SPECIES 2623 Plcl2 (ENSMSIG00000029120) #21 Dazl (ENSMSIG00000029111) #22 Rftn1 (ENSMSIG00000029098) #23 Ryukyu mouse MODERN SPECIES 8 Adgre4 (MGP_CAROLIEiJ_G0021750) Pot1b (MGP_CAROLIEiJ_G0021749) St6gal2 (MGP_CAROLIEiJ_G0021748) MGP_CAROLIEiJ_G0021747 Slc5a7 (MGP_CAROLIEiJ_G0021746) Sult1c1 (MGP_CAROLIEiJ_G0021745) Sgo1 (MGP_CAROLIEiJ_G0021744) #13 Kat2b (MGP_CAROLIEiJ_G0021743) #14 Pp2d1 (MGP_CAROLIEiJ_G0021742) #15 Rab5a (MGP_CAROLIEiJ_G0021741) #16 Efhb (MGP_CAROLIEiJ_G0021740) #17 Kcnh8 (MGP_CAROLIEiJ_G0021739) #18 MGP_CAROLIEiJ_G0021738 ##19 Tbc1d5 (MGP_CAROLIEiJ_G0021737) #20 Plcl2 (MGP_CAROLIEiJ_G0021736) #21 Dazl (MGP_CAROLIEiJ_G0021735) #22 Rftn1 (MGP_CAROLIEiJ_G0021734) #23 Kif6 (MGP_CAROLIEiJ_G0021733) Daam2 (MGP_CAROLIEiJ_G0021732) Mocs1 (MGP_CAROLIEiJ_G0021731) Lrfn2 (MGP_CAROLIEiJ_G0021730) Unc5cl (MGP_CAROLIEiJ_G0021729) Tspo2 (MGP_CAROLIEiJ_G0021728) Apobec2 (MGP_CAROLIEiJ_G0021727) Oard1 (MGP_CAROLIEiJ_G0021726) Nfya (MGP_CAROLIEiJ_G0021725) Treml1 (MGP_CAROLIEiJ_G0021724) Trem2 (MGP_CAROLIEiJ_G0021723) MGP_CAROLIEiJ_G0021722 Treml2 (MGP_CAROLIEiJ_G0021721) Treml4 (MGP_CAROLIEiJ_G0021720) Shrew mouse MODERN SPECIES 9 Adgre4 (MGP_PahariEiJ_G0020739) Pot1b (MGP_PahariEiJ_G0020738) St6gal2 (MGP_PahariEiJ_G0020737) Slc5a7 (MGP_PahariEiJ_G0020736) Sult1c1 (MGP_PahariEiJ_G0020735) Sult1c2 (MGP_PahariEiJ_G0020734) Sgo1 (MGP_PahariEiJ_G0020733) #13 Kat2b (MGP_PahariEiJ_G0020732) #14 MGP_PahariEiJ_G0020731 #15 Rab5a (MGP_PahariEiJ_G0020730) #16 Efhb (MGP_PahariEiJ_G0020729) #17 Kcnh8 (MGP_PahariEiJ_G0020728) #18 Satb1 (MGP_PahariEiJ_G0020727) #19 Tbc1d5 (MGP_PahariEiJ_G0020726) #20 Plcl2 (MGP_PahariEiJ_G0020725) #21 Dazl (MGP_PahariEiJ_G0020724) #22 Rftn1 (MGP_PahariEiJ_G0020723) #23 Kif6 (MGP_PahariEiJ_G0020722) Daam2 (MGP_PahariEiJ_G0020721) Mocs1 (MGP_PahariEiJ_G0020720) Lrfn2 (MGP_PahariEiJ_G0020719) Unc5cl (MGP_PahariEiJ_G0020718) Tspo2 (MGP_PahariEiJ_G0020717) Apobec2 (MGP_PahariEiJ_G0020716) Oard1 (MGP_PahariEiJ_G0020715) Nfya (MGP_PahariEiJ_G0020714) Treml1 (MGP_PahariEiJ_G0020713) Trem2 (MGP_PahariEiJ_G0020712) MGP_PahariEiJ_G0020711 Treml2 (MGP_PahariEiJ_G0020710) Treml4 (MGP_PahariEiJ_G0020709) Rat MODERN SPECIES 19 Sult1c3 (ENSRNOG00000011269) Slc5a7 (ENSRNOG00000010597) ENSRNOG00000062352 ENSRNOG00000068934 St6gal2 (ENSRNOG00000046515) Vom2r76 (ENSRNOG00000045587) Vom2r77 (ENSRNOG00000049443) Pot1b (ENSRNOG00000047439) Adgre4 (ENSRNOG00000050325) LOC691414 (ENSRNOG00000063425) LOC103690742 (ENSRNOG00000067240) LOC108351885 (ENSRNOG00000068779) LOC360998 (ENSRNOG00000062590) AABR07069611.1 (ENSRNOG00000061279) LOC102557419 (ENSRNOG00000048686) Dazl (ENSRNOG00000023474) #22 Rftn1 (ENSRNOG00000011321) #23 Kif6 (ENSRNOG00000011453) Daam2 (ENSRNOG00000053945) Mocs1 (ENSRNOG00000011784) Lrfn2 (ENSRNOG00000011803) Unc5cl (ENSRNOG00000046601) Tspo2 (ENSRNOG00000050521) Apobec2 (ENSRNOG00000012303) Oard1 (ENSRNOG00000012679) Nfya (ENSRNOG00000012702) Treml1 (ENSRNOG00000040109) Trem2 (ENSRNOG00000013578) RGD1307182 (ENSRNOG00000042230) Treml2 (ENSRNOG00000013554) Treml4 (ENSRNOG00000042360) Rodentia_A ANCESTRAL SPECIES 29 ENSGT00910000144184.q.b.a #8 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000154791 Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00910000148052 ENSGT00390000013823.a #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660 ENSGT00390000005529.a ENSGT00940000156297.y ENSGT00940000157205 ENSGT00940000154280.lb Naked mole-rat female MODERN SPECIES 28 ZNF385D (ENSHGLG00000008536) #12 ENSHGLG00000007573 SGOL1 (ENSHGLG00000004889) #13 ENSHGLG00000003205 #14 ENSHGLG00000006921 #15 ENSHGLG00000006357 #16 EFHB (ENSHGLG00000003576) #17 ENSHGLG00000041818 ENSHGLG00000019933 ENSHGLG00000050199 ENSHGLG00000003608 #18 SATB1 (ENSHGLG00000003343) #19 ENSHGLG00000009740 TBC1D5 (ENSHGLG00000002692) #20 PLCL2 (ENSHGLG00000007251) #21 ENSHGLG00000013488 #22 ENSHGLG00000014287 RFTN1 (ENSHGLG00000012795) #23 ENSHGLG00000047215 OXNAD1 (ENSHGLG00000004913) #24 DPH3 (ENSHGLG00000045426) #25 ENSHGLG00000048611 GALNT15 (ENSHGLG00000036779) #26 ENSHGLG00000046432 ENSHGLG00000007756 #27 ENSHGLG00000049379 BTD (ENSHGLG00000006030) #28 ENSHGLG00000050502 ENSHGLG00000004869 FLNB (ENSHGLG00000004931) ENSHGLG00000040412 Hystricomorpha_a ANCESTRAL SPECIES 50 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660 ENSGT00390000005529.a ENSGT00940000156297.y ENSGT00940000157205 ENSGT00940000154280.lb ENSGT00940000156550 Guinea pig MODERN SPECIES NKIRAS1 (ENSCPOG00000038523) #9 UBE2E1 (ENSCPOG00000002251) #10 UBE2E2 (ENSCPOG00000034482) #11 ZNF385D (ENSCPOG00000033668) #12 ENSCPOG00000020230 SGO1 (ENSCPOG00000008318) #13 ENSCPOG00000032533 #14 ENSCPOG00000008310 #14 RAB5A (ENSCPOG00000005322) #16 EFHB (ENSCPOG00000001936) #17 KCNH8 (ENSCPOG00000033526) #18 SATB1 (ENSCPOG00000007101) #19 TBC1D5 (ENSCPOG00000011184) #20 PLCL2 (ENSCPOG00000008396) #21 ENSCPOG00000003836 ENSCPOG00000007628 #22 RFTN1 (ENSCPOG00000007616) #23 OXNAD1 (ENSCPOG00000026881) #24 DPH3 (ENSCPOG00000003477) #25 GALNT15 (ENSCPOG00000003476) #26 ANKRD28 (ENSCPOG00000015199) #27 BTD (ENSCPOG00000024569) #28 PLEKHO2 (ENSCPOG00000030376) PIF1 (ENSCPOG00000008211) RBPMS2 (ENSCPOG00000007695) OAZ2 (ENSCPOG00000001960) ZNF609 (ENSCPOG00000001956) TRIP4 (ENSCPOG00000006483) PCLAF (ENSCPOG00000033197) CSNK1G1 (ENSCPOG00000000256) PPIB (ENSCPOG00000034437) Hystricomorpha_b ANCESTRAL SPECIES 56 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w.f #16 ENSGT00530000063528.A.b.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A.a #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660 ENSGT00390000005529.a ENSGT00940000156297.y ENSGT00940000157205 ENSGT00940000154280.lb ENSGT00940000156550 Long-tailed chinchilla MODERN SPECIES 137 RPL15 (ENSCLAG00000013452) #8 NKIRAS1 (ENSCLAG00000011586) #9 UBE2E1 (ENSCLAG00000013711) #10 UBE2E2 (ENSCLAG00000006330) #11 ENSCLAG00000005308 ZNF385D (ENSCLAG00000004322) #12 SGO1 (ENSCLAG00000007648) #13 KAT2B (ENSCLAG00000006506) #14 PP2D1 (ENSCLAG00000006309) #15 ENSCLAG00000006053 #16 EFHB (ENSCLAG00000005065) #17 KCNH8 (ENSCLAG00000004698) #18 ENSCLAG00000010743 #19 TBC1D5 (ENSCLAG00000007497) #20 PLCL2 (ENSCLAG00000006737) #21 ENSCLAG00000006407 #22 RFTN1 (ENSCLAG00000010603) #23 OXNAD1 (ENSCLAG00000009252) #24 DPH3 (ENSCLAG00000010771) #25 GALNT15 (ENSCLAG00000009893) #26 ANKRD28 (ENSCLAG00000008300) #27 BTD (ENSCLAG00000007560) #28 DNASE1L3 (ENSCLAG00000007458) FLNB (ENSCLAG00000007353) SLMAP (ENSCLAG00000006086) ENSCLAG00000006196 DENND6A (ENSCLAG00000005592) ENSCLAG00000005094 PDE12 (ENSCLAG00000004864) ENSCLAG00000004164 ENSCLAG00000007058 Degu MODERN SPECIES 84 KCNH8 (ENSODEG00000005720) #18 SATB1 (ENSODEG00000006082) #19 TBC1D5 (ENSODEG00000006516) #20 PLCL2 (ENSODEG00000005955) #21 ENSODEG00000019240 ENSODEG00000006167 #22 ENSODEG00000019190 RFTN1 (ENSODEG00000005477) #23 OXNAD1 (ENSODEG00000005968) #24 ENSODEG00000005288 #25 GALNT15 (ENSODEG00000005854) #26 ANKRD28 (ENSODEG00000007156) #27 ENSODEG00000019376 ENSODEG00000008690 ENSODEG00000019255 ENSODEG00000019220 BTD (ENSODEG00000006036) #28 DNASE1L3 (ENSODEG00000006359) ENSODEG00000006739 FLNB (ENSODEG00000008526) SLMAP (ENSODEG00000005798) Sciuridae ANCESTRAL SPECIES 37 ENSGT00910000144184.q.b.a #8 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a.f.b #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a.c #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660.f ENSGT00390000005529.a ENSGT00940000156297 ENSGT00940000157205 ENSGT00940000154280 Marmotini ANCESTRAL SPECIES 12 ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a.f.b #13 ENSGT00940000154107.a.e #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00910000148216 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a.c #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660.f ENSGT00390000005529.a ENSGT00940000156297 ENSGT00940000157205 ENSGT00940000154280 Marmotini_b ANCESTRAL SPECIES 24 ENSGT00950000183122.C.c.b ENSGT00910000144184.q.a.h ##8 ENSGT00940000159705 #9 ENSGT00940000156415.p #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a.e #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337.w #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.hb #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a.c #28 ENSGT00950000182846.a.a.a.b ENSGT00390000003224.A ENSGT00940000156286.pb ENSGT00940000157660.f ENSGT00390000005529.a ENSGT00940000156297.v ENSGT00940000157205 ENSGT00940000154280 ENSGT00940000156550 Squirrel MODERN SPECIES 73 ENSSTOG00000011153 ##8 NKIRAS1 (ENSSTOG00000010538) #9 UBE2E1 (ENSSTOG00000025799) #10 ENSSTOG00000034552 #11 ENSSTOG00000028898 ZNF385D (ENSSTOG00000005742) #12 ENSSTOG00000031366 SGO1 (ENSSTOG00000003766) #13 KAT2B (ENSSTOG00000002904) #14 PP2D1 (ENSSTOG00000012388) #15 RAB5A (ENSSTOG00000026229) #16 KCNH8 (ENSSTOG00000023006) #18 SATB1 (ENSSTOG00000010856) #19 TBC1D5 (ENSSTOG00000028034) #20 PLCL2 (ENSSTOG00000000749) #21 ENSSTOG00000022122 #22 RFTN1 (ENSSTOG00000000072) #23 OXNAD1 (ENSSTOG00000000071) #24 ENSSTOG00000033525 #25 GALNT15 (ENSSTOG00000021175) #26 ANKRD28 (ENSSTOG00000003112) #27 DNASE1L3 (ENSSTOG00000010015) FLNB (ENSSTOG00000009959) SLMAP (ENSSTOG00000025675) DENND6A (ENSSTOG00000007895) ENSSTOG00000019470 PDE12 (ENSSTOG00000007861) ENSSTOG00000022072 ENSSTOG00000034503 ASB14 (ENSSTOG00000013391) APPL1 (ENSSTOG00000015203) Arctic ground squirrel MODERN SPECIES 60 TBC1D5 (ENSUPAG00010015063) #20 PLCL2 (ENSUPAG00010015041) #21 ENSUPAG00010014999 #22 RFTN1 (ENSUPAG00010014993) #23 OXNAD1 (ENSUPAG00010014977) #24 ENSUPAG00010014962 #25 GALNT15 (ENSUPAG00010014931) #26 ANKRD28 (ENSUPAG00010014697) #27 ENSUPAG00010014681 #28 DNASE1L3 (ENSUPAG00010014663) ENSUPAG00010014651 FLNB (ENSUPAG00010014602) SLMAP (ENSUPAG00010014147) DENND6A (ENSUPAG00010014063) ENSUPAG00010014058 PDE12 (ENSUPAG00010014057) DNAH12 (ENSUPAG00010013944) ASB14 (ENSUPAG00010013934) Alpin marmot MODERN SPECIES 38 ZNF385D (ENSMMMG00000008042) #12 ENSMMMG00000008108 #13 KAT2B (ENSMMMG00000008121) #14 PP2D1 (ENSMMMG00000008687) #15 RAB5A (ENSMMMG00000008690) #16 EFHB (ENSMMMG00000008698) #17 KCNH8 (ENSMMMG00000008724) #18 SATB1 (ENSMMMG00000008761) #19 TBC1D5 (ENSMMMG00000009048) #20 ENSMMMG00000009082 PLCL2 (ENSMMMG00000009088) #21 ENSMMMG00000009099 ENSMMMG00000009107 #22 ENSMMMG00000009137 #23 ENSMMMG00000009151 #23 OXNAD1 (ENSMMMG00000009156) #24 ENSMMMG00000009167 #25 ENSMMMG00000009182 GALNT15 (ENSMMMG00000009190) #26 ENSMMMG00000009230 ANKRD28 (ENSMMMG00000009244) #27 ENSMMMG00000009351 DNASE1L3 (ENSMMMG00000009356) FLNB (ENSMMMG00000009402) SLMAP (ENSMMMG00000009479) DENND6A (ENSMMMG00000009892) ARF4 (ENSMMMG00000009997) PDE12 (ENSMMMG00000010035) Eurasian red squirrel MODERN SPECIES 7 ZNF385D (ENSSVLG00005023781) #12 ENSSVLG00005023824 ENSSVLG00005023862 ENSSVLG00005023889 ENSSVLG00005023908 #13 ENSSVLG00005023944 #14 PP2D1 (ENSSVLG00005023998) #15 RAB5A (ENSSVLG00005024015) #16 EFHB (ENSSVLG00005024067) #17 ENSSVLG00005024162 ENSSVLG00005024173 KCNH8 (ENSSVLG00005024188) #18 SATB1 (ENSSVLG00005024270) #19 TBC1D5 (ENSSVLG00005008563) #20 PLCL2 (ENSSVLG00005008741) #21 ENSSVLG00005008794 #22 ENSSVLG00005008951 ENSSVLG00005008982 RFTN1 (ENSSVLG00005009013) #23 ENSSVLG00005009053 #24 ENSSVLG00005009153 #25 ENSSVLG00005009200 GALNT15 (ENSSVLG00005009222) #26 ENSSVLG00005009250 ENSSVLG00005009267 ENSSVLG00005009285 ANKRD28 (ENSSVLG00005009365) #27 ENSSVLG00005009644 ENSSVLG00005009695 ENSSVLG00005009728 DNASE1L3 (ENSSVLG00005009776) Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000154989 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Eulipotyphla ANCESTRAL SPECIES ENSGT00530000063480.b #22 Hedgehog MODERN SPECIES 226 ENSEEUG00000005973 #22 Common shrew MODERN SPECIES 12490 ENSSARG00000008473 #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Carnivora ANCESTRAL SPECIES 10 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Caniformia ANCESTRAL SPECIES ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Caniformia_b ANCESTRAL SPECIES ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000168676 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 Ursidae ANCESTRAL SPECIES 1 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Ursus ANCESTRAL SPECIES 14 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000017724.b ##31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000164180 Polar bear MODERN SPECIES 112 NKIRAS1 (ENSUMAG00000018603) #9 UBE2E1 (ENSUMAG00000018601) #10 UBE2E2 (ENSUMAG00000018586) #11 ENSUMAG00000018560 #11 ZNF385D (ENSUMAG00000018529) #12 SGO1 (ENSUMAG00000018474) #13 KAT2B (ENSUMAG00000018349) #14 PP2D1 (ENSUMAG00000018320) #15 RAB5A (ENSUMAG00000018295) #16 EFHB (ENSUMAG00000018281) #17 KCNH8 (ENSUMAG00000018259) #18 ENSUMAG00000018223 SATB1 (ENSUMAG00000018158) #19 TBC1D5 (ENSUMAG00000018122) #20 PLCL2 (ENSUMAG00000018106) #21 ENSUMAG00000018079 #22 RFTN1 (ENSUMAG00000018067) #23 OXNAD1 (ENSUMAG00000018056) #24 DPH3 (ENSUMAG00000018052) #25 GALNT15 (ENSUMAG00000018040) #26 ANKRD28 (ENSUMAG00000017994) #27 BTD (ENSUMAG00000017973) #28 HACL1 (ENSUMAG00000017963) #29 COLQ (ENSUMAG00000017915) #30 EAF1 (ENSUMAG00000017898) #31 METTL6 (ENSUMAG00000017889) #32 SH3BP5 (ENSUMAG00000017855) #33 CAPN7 (ENSUMAG00000017845) #34 ENSUMAG00000017806 ENSUMAG00000017796 COL6A6 (ENSUMAG00000017686) American black bear MODERN SPECIES 1433 ENSUAMG00000020299 #22 RFTN1 (ENSUAMG00000020297) #23 OXNAD1 (ENSUAMG00000020294) #24 DPH3 (ENSUAMG00000020293) #25 GALNT15 (ENSUAMG00000020289) #26 Giant Panda MODERN SPECIES 16 NKIRAS1 (ENSAMEG00000003508) #9 UBE2E1 (ENSAMEG00000003515) #10 UBE2E2 (ENSAMEG00000003528) #11 ZNF385D (ENSAMEG00000009354) #12 ENSAMEG00000025071 SGO1 (ENSAMEG00000000913) #13 KAT2B (ENSAMEG00000000922) #14 PP2D1 (ENSAMEG00000000952) #15 RAB5A (ENSAMEG00000000954) #16 EFHB (ENSAMEG00000000973) #17 KCNH8 (ENSAMEG00000007435) #18 SATB1 (ENSAMEG00000009099) #19 ENSAMEG00000024183 TBC1D5 (ENSAMEG00000009080) #20 PLCL2 (ENSAMEG00000009078) #21 ENSAMEG00000009059 #22 ENSAMEG00000027343 RFTN1 (ENSAMEG00000009041) #23 OXNAD1 (ENSAMEG00000009028) #24 DPH3 (ENSAMEG00000030700) #25 GALNT15 (ENSAMEG00000008995) #26 ANKRD28 (ENSAMEG00000008924) #27 BTD (ENSAMEG00000008918) #28 HACL1 (ENSAMEG00000008878) #29 COLQ (ENSAMEG00000008838) #30 EAF1 (ENSAMEG00000008829) #31 METTL6 (ENSAMEG00000008819) #32 ENSAMEG00000008803 #33 ENSAMEG00000008756 #34 ENSAMEG00000026185 ENSAMEG00000004820 Mustelinae ANCESTRAL SPECIES 153 ENSGT00940000154107.a #13 ENSGT00940000154995.w #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 American mink DUPLICATION American mink MODERN SPECIES 136 ENSNVIG00000019574 SGO1 (ENSNVIG00000019530) #13 KAT2B (ENSNVIG00000019496) #14 PP2D1 (ENSNVIG00000019479) #15 RAB5A (ENSNVIG00000019469) #16 EFHB (ENSNVIG00000019456) #17 KCNH8 (ENSNVIG00000019424) #18 ENSNVIG00000019413 SATB1 (ENSNVIG00000019324) #19 TBC1D5 (ENSNVIG00000019211) #20 PLCL2 (ENSNVIG00000019182) #21 ENSNVIG00000019152 #22 RFTN1 (ENSNVIG00000019134) #23 F5H620 (ENSNVIG00000019064) #24 DPH3 (ENSNVIG00000019043) #25 GALNT15 (ENSNVIG00000019006) #26 ANKRD28 (ENSNVIG00000017951) #27 BTD (ENSNVIG00000017840) #28 HACL1 (ENSNVIG00000017486) #29 COLQ (ENSNVIG00000017326) #30 ENSNVIG00000017316 American mink MODERN SPECIES 26 ENSNVIG00000004556 KRTAP27-1 (ENSNVIG00000004552) KRTAP25-1 (ENSNVIG00000004548) KRTAP24-1 (ENSNVIG00000004545) CLD8 (ENSNVIG00000004535) CLDN17 (ENSNVIG00000004520) GRIK1 (ENSNVIG00000004199) BACH1 (ENSNVIG00000004162) B4DFW0 (ENSNVIG00000004133) CCT8 (ENSNVIG00000004044) USP16 (ENSNVIG00000003966) RWDD2B (ENSNVIG00000003943) LTN1 (ENSNVIG00000003815) N6AMT1 (ENSNVIG00000003781) ENSNVIG00000003753 ENSNVIG00000003724 #22 ADAMTS5 (ENSNVIG00000003697) ADAMTS1 (ENSNVIG00000003683) CYYR1 (ENSNVIG00000003664) APP (ENSNVIG00000003384) GABPA (ENSNVIG00000003339) ATP5PF (ENSNVIG00000003266) JAM2 (ENSNVIG00000003231) MRPL39 (ENSNVIG00000003180) ENSNVIG00000003171 ENSNVIG00000003162 ENSNVIG00000003122 Ferret MODERN SPECIES 345 KCNH8 (ENSMPUG00000001398) #18 ENSMPUG00000001402 SATB1 (ENSMPUG00000001406) #19 ENSMPUG00000001411 TBC1D5 (ENSMPUG00000001414) #20 PLCL2 (ENSMPUG00000001422) #21 ENSMPUG00000001426 #22 ENSMPUG00000001472 #23 ENSMPUG00000001478 #23 OXNAD1 (ENSMPUG00000001516) #24 DPH3 (ENSMPUG00000001521) #25 GALNT15 (ENSMPUG00000001528) #26 ANKRD28 (ENSMPUG00000001532) #27 BTD (ENSMPUG00000001545) #28 HACL1 (ENSMPUG00000001551) #29 COLQ (ENSMPUG00000001650) #30 EAF1 (ENSMPUG00000001699) #31 METTL6 (ENSMPUG00000001741) #32 SH3BP5 (ENSMPUG00000001747) #33 CAPN7 (ENSMPUG00000001751) #34 ENSMPUG00000001757 ENSMPUG00000001768 Canidae ANCESTRAL SPECIES 24 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415.h #10 ENSGT00940000155985.eb #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679.e #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Canis_lupus ANCESTRAL SPECIES 27 ENSGT00910000144184.q.b.a #8 ENSGT00940000159705 #9 ENSGT00940000156415.h #10 ENSGT00940000155985.eb #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679.e #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Dog MODERN SPECIES 15 NKIRAS1 (ENSCAFG00845019798) #9 ENSCAFG00845019901 #10 UBE2E2 (ENSCAFG00845020072) #11 ZNF385D (ENSCAFG00845020268) #12 SGO1 (ENSCAFG00845020400) #13 KAT2B (ENSCAFG00845020587) #14 PP2D1 (ENSCAFG00845021158) #15 RAB5A (ENSCAFG00845021204) #16 EFHB (ENSCAFG00845021296) #17 KCNH8 (ENSCAFG00845021492) #18 ENSCAFG00845021600 SATB1 (ENSCAFG00845021681) #19 TBC1D5 (ENSCAFG00845021936) #20 ENSCAFG00845022287 PLCL2 (ENSCAFG00845022325) #21 DAZL (ENSCAFG00845022414) #22 RFTN1 (ENSCAFG00845022667) #23 OXNAD1 (ENSCAFG00845022998) #24 DPH3 (ENSCAFG00845023089) #25 GALNT15 (ENSCAFG00845023124) #26 ANKRD28 (ENSCAFG00845023341) #27 BTD (ENSCAFG00845024081) #28 ENSCAFG00845024606 #29 EAF1 (ENSCAFG00845026720) #31 SH3BP5 (ENSCAFG00845026935) #33 ENSCAFG00845027174 #34 ENSCAFG00845027371 ENSCAFG00845027616 COL6A5 (ENSCAFG00845027693) COL6A6 (ENSCAFG00845027892) PIK3R4 (ENSCAFG00845028045) Dingo MODERN SPECIES 80 ZNF385D (ENSCAFG00020027278) #12 ENSCAFG00020027279 ENSCAFG00020027281 #13 ENSCAFG00020027282 #14 ENSCAFG00020027283 #14 PP2D1 (ENSCAFG00020027286) #15 RAB5A (ENSCAFG00020027287) #16 EFHB (ENSCAFG00020027289) #17 KCNH8 (ENSCAFG00020027292) #18 ENSCAFG00020027293 SATB1 (ENSCAFG00020027296) #19 TBC1D5 (ENSCAFG00020027311) #20 PLCL2 (ENSCAFG00020027333) #21 ENSCAFG00020027335 #22 RFTN1 (ENSCAFG00020027339) #23 OXNAD1 (ENSCAFG00020027343) #24 DPH3 (ENSCAFG00020027350) #25 GALNT15 (ENSCAFG00020027352) #26 ANKRD28 (ENSCAFG00020027368) #27 BTD (ENSCAFG00020027376) #28 HACL1 (ENSCAFG00020027377) #29 ENSCAFG00020027379 #30 EAF1 (ENSCAFG00020027380) #31 ENSCAFG00020027381 #32 SH3BP5 (ENSCAFG00020027383) #33 CAPN7 (ENSCAFG00020027403) #34 ENSCAFG00020027431 ENSCAFG00020027435 ENSCAFG00020027436 Red fox MODERN SPECIES 58 UBE2E1 (ENSVVUG00000028240) #10 UBE2E2 (ENSVVUG00000000076) #11 ENSVVUG00000000087 ENSVVUG00000000186 #11 ZNF385D (ENSVVUG00000000306) #12 ENSVVUG00000000381 SGO1 (ENSVVUG00000000434) #13 KAT2B (ENSVVUG00000000458) #14 PP2D1 (ENSVVUG00000000482) #15 RAB5A (ENSVVUG00000000489) #16 EFHB (ENSVVUG00000000504) #17 KCNH8 (ENSVVUG00000000541) #18 SATB1 (ENSVVUG00000000582) #19 TBC1D5 (ENSVVUG00000000609) #20 PLCL2 (ENSVVUG00000000654) #21 ENSVVUG00000000673 #22 RFTN1 (ENSVVUG00000000683) #23 OXNAD1 (ENSVVUG00000000718) #24 DPH3 (ENSVVUG00000000724) #25 GALNT15 (ENSVVUG00000000746) #26 ANKRD28 (ENSVVUG00000000775) #27 BTD (ENSVVUG00000000873) #28 HACL1 (ENSVVUG00000000910) #29 Felidae ANCESTRAL SPECIES 9 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b.a.a ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT01000000220746 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Panthera ANCESTRAL SPECIES 12 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b.a.a ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT01000000220746 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Tiger MODERN SPECIES 261 ENSPTIG00000012234 ##19 ENSPTIG00000012432 ##19 TBC1D5 (ENSPTIG00000012831) #20 PLCL2 (ENSPTIG00000019457) #21 ENSPTIG00000020895 #22 RFTN1 (ENSPTIG00000005860) #23 OXNAD1 (ENSPTIG00000007542) #24 DPH3 (ENSPTIG00000010209) #25 GALNT15 (ENSPTIG00000016217) #26 ANKRD28 (ENSPTIG00000017339) #27 BTD (ENSPTIG00000021790) #28 HACL1 (ENSPTIG00000022059) #29 COLQ (ENSPTIG00000008099) #30 EAF1 (ENSPTIG00000014507) #31 METTL6 (ENSPTIG00000015336) #32 SH3BP5 (ENSPTIG00000017234) #33 CAPN7 (ENSPTIG00000019564) #34 ENSPTIG00000002601 COL6A5 (ENSPTIG00000007444) COL6A6 (ENSPTIG00000010831) Panthera_a ANCESTRAL SPECIES 17 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00940000154772.g.b.a.a ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT01000000220746 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000164180 leopard MODERN SPECIES 5 ZNF385D (ENSPPRG00000005481) #12 ENSPPRG00000004998 #13 KAT2B (ENSPPRG00000003015) #14 ENSPPRG00000002641 PP2D1 (ENSPPRG00000002083) #15 ENSPPRG00000001655 #16 EFHB (ENSPPRG00000000503) #17 KCNH8 (ENSPPRG00000023681) #18 ENSPPRG00000020741 SATB1 (ENSPPRG00000019113) #19 TBC1D5 (ENSPPRG00000015799) #20 ENSPPRG00000010158 PLCL2 (ENSPPRG00000009211) #21 ENSPPRG00000008794 #22 RFTN1 (ENSPPRG00000007488) #23 OXNAD1 (ENSPPRG00000007203) #24 DPH3 (ENSPPRG00000004843) #25 GALNT15 (ENSPPRG00000004449) #26 ANKRD28 (ENSPPRG00000004331) #27 ENSPPRG00000003237 BTD (ENSPPRG00000002804) #28 HACL1 (ENSPPRG00000001693) #29 COLQ (ENSPPRG00000023699) #30 EAF1 (ENSPPRG00000014826) #31 METTL6 (ENSPPRG00000014661) #32 SH3BP5 (ENSPPRG00000014017) #33 CAPN7 (ENSPPRG00000012968) #34 ENSPPRG00000012527 COL6A5 (ENSPPRG00000009495) lion MODERN SPECIES 9 ENSPLOG00000007334 ##8 NKIRAS1 (ENSPLOG00000007358) #9 UBE2E1 (ENSPLOG00000007394) #10 UBE2E2 (ENSPLOG00000007465) #11 ZNF385D (ENSPLOG00000007520) #12 SGO1 (ENSPLOG00000007578) #13 KAT2B (ENSPLOG00000007809) #14 ENSPLOG00000008548 PP2D1 (ENSPLOG00000008568) #15 RAB5A (ENSPLOG00000008606) #16 EFHB (ENSPLOG00000008658) #17 KCNH8 (ENSPLOG00000008800) #18 SATB1 (ENSPLOG00000008905) #19 TBC1D5 (ENSPLOG00000008965) #20 PLCL2 (ENSPLOG00000009144) #21 ENSPLOG00000009211 #22 RFTN1 (ENSPLOG00000009354) #23 OXNAD1 (ENSPLOG00000009387) #24 DPH3 (ENSPLOG00000009427) #25 ENSPLOG00000009456 GALNT15 (ENSPLOG00000009476) #26 ANKRD28 (ENSPLOG00000009621) #27 BTD (ENSPLOG00000009945) #28 HACL1 (ENSPLOG00000010310) #29 COLQ (ENSPLOG00000011130) #30 EAF1 (ENSPLOG00000011678) #31 SH3BP5 (ENSPLOG00000011742) #33 CAPN7 (ENSPLOG00000011881) #34 ENSPLOG00000011940 ENSPLOG00000012148 COL6A6 (ENSPLOG00000012227) Cat MODERN SPECIES 240 UBE2E1 (ENSFCAG00000035590) #10 UBE2E2 (ENSFCAG00000007748) #11 ZNF385D (ENSFCAG00000027175) #12 SGO1 (ENSFCAG00000035315) #13 ENSFCAG00000033105 KAT2B (ENSFCAG00000004458) #14 PP2D1 (ENSFCAG00000040097) #15 RAB5A (ENSFCAG00000039795) #16 EFHB (ENSFCAG00000004454) #17 KCNH8 (ENSFCAG00000012306) #18 ENSFCAG00000022406 SATB1 (ENSFCAG00000004295) #19 ENSFCAG00000044938 TBC1D5 (ENSFCAG00000004653) #20 PLCL2 (ENSFCAG00000022152) #21 ENSFCAG00000023607 #22 RFTN1 (ENSFCAG00000022758) #23 OXNAD1 (ENSFCAG00000006357) #24 DPH3 (ENSFCAG00000035252) #25 ENSFCAG00000053298 GALNT15 (ENSFCAG00000006350) #26 ANKRD28 (ENSFCAG00000011307) #27 BTD (ENSFCAG00000011306) #28 HACL1 (ENSFCAG00000011305) #29 COLQ (ENSFCAG00000011304) #30 EAF1 (ENSFCAG00000011303) #31 METTL6 (ENSFCAG00000022284) #32 SH3BP5 (ENSFCAG00000013213) #33 CAPN7 (ENSFCAG00000030939) #34 COL6A5 (ENSFCAG00000044600) COL6A6 (ENSFCAG00000013504) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Equus ANCESTRAL SPECIES 5 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT01030000238633 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00940000167515 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Donkey MODERN SPECIES 13 ENSEASG00005027441 ##8 NKIRAS1 (ENSEASG00005026235) #9 UBE2E1 (ENSEASG00005005967) #10 UBE2E2 (ENSEASG00005028306) #11 ENSEASG00005005954 SGO1 (ENSEASG00005005948) #13 KAT2B (ENSEASG00005005848) #14 PP2D1 (ENSEASG00005005822) #15 RAB5A (ENSEASG00005005818) #16 EFHB (ENSEASG00005005815) #17 ENSEASG00005005811 KCNH8 (ENSEASG00005005804) #18 SATB1 (ENSEASG00005005787) #19 TBC1D5 (ENSEASG00005005775) #20 PLCL2 (ENSEASG00005005767) #21 ENSEASG00005005756 #22 RFTN1 (ENSEASG00005005754) #23 OXNAD1 (ENSEASG00005005749) #24 ENSEASG00005025473 ENSEASG00005023827 GALNT15 (ENSEASG00005005743) #26 ENSEASG00005005740 ANKRD28 (ENSEASG00005005733) #27 BTD (ENSEASG00005005732) #28 HACL1 (ENSEASG00005005730) #29 COLQ (ENSEASG00005005725) #30 EAF1 (ENSEASG00005005720) #31 METTL6 (ENSEASG00005005716) #32 ENSEASG00005005713 #33 ENSEASG00005005708 #34 ENSEASG00005005705 Horse MODERN SPECIES 7 NKIRAS1 (ENSECAG00000010292) #9 UBE2E1 (ENSECAG00000011371) #10 UBE2E2 (ENSECAG00000029267) #11 ZNF385D (ENSECAG00000012368) KAT2B (ENSECAG00000013925) #14 SGO1 (ENSECAG00000012475) #13 PP2D1 (ENSECAG00000018679) #15 RAB5A (ENSECAG00000019062) #16 EFHB (ENSECAG00000019496) ENSECAG00000031635 KCNH8 (ENSECAG00000023098) #18 SATB1 (ENSECAG00000023585) #19 TBC1D5 (ENSECAG00000008017) #20 ENSECAG00000053253 PLCL2 (ENSECAG00000010068) #21 ENSECAG00000010923 #22 RFTN1 (ENSECAG00000013897) #23 OXNAD1 (ENSECAG00000014741) #24 ENSECAG00000042046 GALNT15 (ENSECAG00000016679) #26 ANKRD28 (ENSECAG00000019591) #27 BTD (ENSECAG00000003387) #28 ENSECAG00000056916 HACL1 (ENSECAG00000009309) #29 COLQ (ENSECAG00000019755) #30 EAF1 (ENSECAG00000024360) #31 METTL6 (ENSECAG00000055054) #32 SH3BP5 (ENSECAG00000024842) #33 CAPN7 (ENSECAG00000004932) #34 ENSECAG00000011581 COL6A5 (ENSECAG00000012733) Chiroptera ANCESTRAL SPECIES 19 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Megabat MODERN SPECIES 527 ENSPVAG00000007836 #22 RFTN1 (ENSPVAG00000007833) #23 OXNAD1 (ENSPVAG00000007831) #24 ENSPVAG00000007830 GALNT15 (ENSPVAG00000007827) #26 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000155619 Greater horseshoe bat MODERN SPECIES 8 NKIRAS1 (ENSRFEG00010011183) #9 ENSRFEG00010011222 #10 UBE2E2 (ENSRFEG00010011378) #11 ENSRFEG00010011446 ZNF385D (ENSRFEG00010011496) #12 SGO1 (ENSRFEG00010011604) #13 KAT2B (ENSRFEG00010012070) #14 PP2D1 (ENSRFEG00010012143) #15 RAB5A (ENSRFEG00010012219) #16 EFHB (ENSRFEG00010012369) #17 KCNH8 (ENSRFEG00010012438) #18 SATB1 (ENSRFEG00010012658) #19 ENSRFEG00010012725 TBC1D5 (ENSRFEG00010012791) #20 PLCL2 (ENSRFEG00010012959) #21 ENSRFEG00010013048 #22 RFTN1 (ENSRFEG00010013368) #23 OXNAD1 (ENSRFEG00010013428) #24 DPH3 (ENSRFEG00010013628) #25 GALNT15 (ENSRFEG00010013714) #26 ANKRD28 (ENSRFEG00010013787) #27 BTD (ENSRFEG00010013954) #28 HACL1 (ENSRFEG00010014213) #29 COLQ (ENSRFEG00010014398) #30 EAF1 (ENSRFEG00010014564) #31 METTL6 (ENSRFEG00010014617) #32 SH3BP5 (ENSRFEG00010014768) #33 CAPN7 (ENSRFEG00010014864) #34 ENSRFEG00010014927 COL6A5 (ENSRFEG00010015260) COL6A6 (ENSRFEG00010015736) Microbat MODERN SPECIES 945 SGO1 (ENSMLUG00000007432) #13 KAT2B (ENSMLUG00000007403) #14 PP2D1 (ENSMLUG00000011709) #15 RAB5A (ENSMLUG00000011716) #16 EFHB (ENSMLUG00000011722) #17 KCNH8 (ENSMLUG00000001650) #18 SATB1 (ENSMLUG00000001860) #19 TBC1D5 (ENSMLUG00000013559) #20 PLCL2 (ENSMLUG00000013543) #21 ENSMLUG00000011337 #22 RFTN1 (ENSMLUG00000000975) #23 OXNAD1 (ENSMLUG00000000969) #24 DPH3 (ENSMLUG00000017660) #25 GALNT15 (ENSMLUG00000017659) #26 ENSMLUG00000022391 ANKRD28 (ENSMLUG00000002784) #27 BTD (ENSMLUG00000002778) #28 HACL1 (ENSMLUG00000002771) #29 COLQ (ENSMLUG00000002756) #30 EAF1 (ENSMLUG00000002747) #31 METTL6 (ENSMLUG00000002743) #32 SH3BP5 (ENSMLUG00000002737) #33 CAPN7 (ENSMLUG00000002720) #34 ENSMLUG00000005740 COL6A5 (ENSMLUG00000010691) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00910000144184.q.a ##8 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Suina ANCESTRAL SPECIES 1 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b.a #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00910000147226 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Pig MODERN SPECIES 4 KAT2B (ENSSSCG00000024621) #14 PP2D1 (ENSSSCG00000027327) #15 RAB5A (ENSSSCG00000037653) #16 EFHB (ENSSSCG00000011205) #17 KCNH8 (ENSSSCG00000011204) #18 ENSSSCG00000056921 ENSSSCG00000059545 ENSSSCG00000053218 SATB1 (ENSSSCG00000011201) #19 ENSSSCG00000058979 ENSSSCG00000061112 ENSSSCG00000061080 ENSSSCG00000049233 TBC1D5 (ENSSSCG00000011199) #20 PLCL2 (ENSSSCG00000029811) #21 ENSSSCG00000030671 #22 ENSSSCG00000050150 RFTN1 (ENSSSCG00000011198) #23 OXNAD1 (ENSSSCG00000011197) #24 DPH3 (ENSSSCG00000056217) #25 GALNT15 (ENSSSCG00000011195) #26 ANKRD28 (ENSSSCG00000011194) #27 BTD (ENSSSCG00000011193) #28 HACL1 (ENSSSCG00000011192) #29 COLQ (ENSSSCG00000028911) #30 EAF1 (ENSSSCG00000026622) #31 METTL6 (ENSSSCG00000011190) #32 SH3BP5 (ENSSSCG00000024938) #33 CAPN7 (ENSSSCG00000030697) #34 ENSSSCG00000054192 COL6A5 (ENSSSCG00000011186) Chacoan peccary MODERN SPECIES 950 RPL15 (ENSCWAG00000014981) #8 NKIRAS1 (ENSCWAG00000014944) #9 ENSCWAG00000014883 #10 ENSCWAG00000014850 UBE2E2 (ENSCWAG00000014787) #11 ZNF385D (ENSCWAG00000014736) #12 SGO1 (ENSCWAG00000014455) #13 KAT2B (ENSCWAG00000014268) #14 PP2D1 (ENSCWAG00000014209) #15 RAB5A (ENSCWAG00000014144) #16 EFHB (ENSCWAG00000013945) #17 KCNH8 (ENSCWAG00000013749) #18 SATB1 (ENSCWAG00000013549) #19 TBC1D5 (ENSCWAG00000013341) #20 PLCL2 (ENSCWAG00000013243) #21 ENSCWAG00000013021 #22 RFTN1 (ENSCWAG00000012968) #23 OXNAD1 (ENSCWAG00000012470) #24 DPH3 (ENSCWAG00000012398) #25 GALNT15 (ENSCWAG00000012343) #26 ANKRD28 (ENSCWAG00000011879) #27 ENSCWAG00000020745 BTD (ENSCWAG00000020723) #28 HACL1 (ENSCWAG00000020631) #29 COLQ (ENSCWAG00000020535) #30 EAF1 (ENSCWAG00000020521) #31 METTL6 (ENSCWAG00000020511) #32 SH3BP5 (ENSCWAG00000020499) #33 CAPN7 (ENSCWAG00000020439) #34 ENSCWAG00000020406 COL6A5 (ENSCWAG00000020322) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Camelidae ANCESTRAL SPECIES 92 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00940000169811 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000155619 ENSGT00390000016225 Alpaca MODERN SPECIES 5240 ENSVPAG00000000468 #22 Arabian camel MODERN SPECIES NKIRAS1 (ENSCDRG00005003487) #9 UBE2E1 (ENSCDRG00005003446) #10 ENSCDRG00005003402 UBE2E2 (ENSCDRG00005003374) #11 ZNF385D (ENSCDRG00005003324) #12 ENSCDRG00005003293 KAT2B (ENSCDRG00005002364) #14 PP2D1 (ENSCDRG00005002250) #15 RAB5A (ENSCDRG00005002235) #16 EFHB (ENSCDRG00005002193) #17 KCNH8 (ENSCDRG00005002155) #18 SATB1 (ENSCDRG00005002136) #19 ENSCDRG00005002109 TBC1D5 (ENSCDRG00005002049) #20 PLCL2 (ENSCDRG00005002032) #21 ENSCDRG00005002024 #22 RFTN1 (ENSCDRG00005002002) #23 OXNAD1 (ENSCDRG00005001933) #24 DPH3 (ENSCDRG00005001905) #25 GALNT15 (ENSCDRG00005001875) #26 ANKRD28 (ENSCDRG00005001643) #27 BTD (ENSCDRG00005001581) #28 HACL1 (ENSCDRG00005001449) #29 COLQ (ENSCDRG00005001323) #30 EAF1 (ENSCDRG00005001289) #31 SH3BP5 (ENSCDRG00005001218) #33 CAPN7 (ENSCDRG00005001146) #34 COL6A5 (ENSCDRG00005000604) COL6A6 (ENSCDRG00005000408) PIK3R4 (ENSCDRG00005000341) ATP2C1 (ENSCDRG00005000079) Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00910000144184.q.b.a #8 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415.d #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Pecora ANCESTRAL SPECIES 8 ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Yarkand deer MODERN SPECIES 10 ATG3 (ENSCHYG00000021648) ENSCHYG00000021566 ZNF596 (ENSCHYG00000021476) ENSCHYG00000021440 SGO1 (ENSCHYG00000021407) #13 KAT2B (ENSCHYG00000018554) #14 PP2D1 (ENSCHYG00000018405) #15 RAB5A (ENSCHYG00000018319) #16 EFHB (ENSCHYG00000017996) #17 ENSCHYG00000017953 KCNH8 (ENSCHYG00000017889) #18 ENSCHYG00000017861 SATB1 (ENSCHYG00000017752) #19 TBC1D5 (ENSCHYG00000017550) #20 PLCL2 (ENSCHYG00000017252) #21 ENSCHYG00000017075 #22 RFTN1 (ENSCHYG00000016683) #23 OXNAD1 (ENSCHYG00000016543) #24 DPH3 (ENSCHYG00000016462) #25 GALNT15 (ENSCHYG00000016130) #26 ANKRD28 (ENSCHYG00000014677) #27 BTD (ENSCHYG00000014404) #28 ENSCHYG00000014376 HACL1 (ENSCHYG00000011632) #29 COLQ (ENSCHYG00000011149) #30 ENSCHYG00000011089 EAF1 (ENSCHYG00000011048) #31 METTL6 (ENSCHYG00000010912) #32 SH3BP5 (ENSCHYG00000010811) #33 CAPN7 (ENSCHYG00000010535) #34 ENSCHYG00000010481 Percora_a ANCESTRAL SPECIES 7 ENSGT00940000158211.y.a.a ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Siberian musk deer MODERN SPECIES 1179 KCNH8 (ENSMMSG00000021994) #18 ENSMMSG00000021976 SATB1 (ENSMMSG00000021945) #19 TBC1D5 (ENSMMSG00000021871) #20 PLCL2 (ENSMMSG00000021824) #21 ENSMMSG00000021788 #22 RFTN1 (ENSMMSG00000021767) #23 OXNAD1 (ENSMMSG00000021736) #24 DPH3 (ENSMMSG00000021713) #25 GALNT15 (ENSMMSG00000021671) #26 ANKRD28 (ENSMMSG00000021499) #27 BTD (ENSMMSG00000021460) #28 HACL1 (ENSMMSG00000021383) #29 COLQ (ENSMMSG00000020685) #30 EAF1 (ENSMMSG00000020617) #31 METTL6 (ENSMMSG00000020555) #32 SH3BP5 (ENSMMSG00000020492) #33 CAPN7 (ENSMMSG00000020429) #34 ENSMMSG00000020401 COL6A5 (ENSMMSG00000020230) COL6A6 (ENSMMSG00000020084) Bovidae ANCESTRAL SPECIES 9 ENSGT00940000158211.y.a.a.b ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Bovinae ANCESTRAL SPECIES 6 ENSGT00940000158211.y.a.a.b ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00960000190334 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT01050000248068 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Bos ANCESTRAL SPECIES 7 ENSGT00940000158211.y.a.a.b ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.l #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00960000190334 ENSGT00940000160808 #26 ENSGT00950000182908.C.e.a #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT01050000248068 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Bos_a ANCESTRAL SPECIES 5 ENSGT00940000158211.y.a.a.b ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.E.b ##19 ENSGT00390000008096.E.a ##19 ENSGT00940000157121 #20 ENSGT00940000154846.b.x.c ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.l #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00960000190334 ENSGT00940000160808 #26 ENSGT00950000182908.C.f #27 ENSGT00950000182908.C.e.a #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 Wild yak MODERN SPECIES 804 ENSBMUG00000022078 #20 ENSBMUG00000022040 PLCL2 (ENSBMUG00000022030) #21 ENSBMUG00000021997 #22 RFTN1 (ENSBMUG00000021986) #23 OXNAD1 (ENSBMUG00000021961) #24 ENSBMUG00000021892 #25 ENSBMUG00000021878 GALNT15 (ENSBMUG00000021868) #26 Domestic yak MODERN SPECIES ZNF596 (ENSBGRG00000002023) ENSBGRG00000002004 SGO1 (ENSBGRG00000001982) #13 KAT2B (ENSBGRG00000001845) #14 RAB5A (ENSBGRG00000001791) #16 EFHB (ENSBGRG00000001764) #17 ENSBGRG00000001755 KCNH8 (ENSBGRG00000001743) #18 ENSBGRG00000001733 ENSBGRG00000001727 ##19 ENSBGRG00000001708 ##19 TBC1D5 (ENSBGRG00000000433) #20 ENSBGRG00000000231 ENSBGRG00000000227 PLCL2 (ENSBGRG00000000215) #21 ENSBGRG00000000174 #22 ENSBGRG00000005989 #23 RFTN1 (ENSBGRG00000005969) #23 OXNAD1 (ENSBGRG00000005867) #24 DPH3 (ENSBGRG00000005826) #25 GALNT15 (ENSBGRG00000005716) #26 ANKRD28 (ENSBGRG00000005474) #27 ENSBGRG00000005423 #28 HACL1 (ENSBGRG00000004645) #29 COLQ (ENSBGRG00000004392) #30 EAF1 (ENSBGRG00000004328) #31 METTL6 (ENSBGRG00000004234) #32 ENSBGRG00000004225 SH3BP5 (ENSBGRG00000004132) #33 CAPN7 (ENSBGRG00000004003) #34 COL6A5 (ENSBGRG00000003956) Bos_b ANCESTRAL SPECIES 5 ENSGT00940000158211.y.a.a.b ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.l #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT01100000263481.n.a.a.b.b.b.a.a.b.b.b ENSGT00940000160808 #26 ENSGT00950000182908.C.e.a #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT01050000248068 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 Hybrid Bos Indicus MODERN SPECIES ENSBIXG00005013496 ENSBIXG00005013542 ZNF596 (ENSBIXG00005013604) ENSBIXG00005013619 SGO1 (ENSBIXG00005013664) #13 KAT2B (ENSBIXG00005013873) #14 PP2D1 (ENSBIXG00005013941) #15 RAB5A (ENSBIXG00005001761) #16 EFHB (ENSBIXG00005001828) #17 KCNH8 (ENSBIXG00005001852) #18 SATB1 (ENSBIXG00005014252) #19 TBC1D5 (ENSBIXG00005005933) #20 ENSBIXG00005001921 PLCL2 (ENSBIXG00005014406) #21 ENSBIXG00005014489 #22 RFTN1 (ENSBIXG00005001982) #23 OXNAD1 (ENSBIXG00005002032) #24 DPH3 (ENSBIXG00005002043) #25 ENSBIXG00005014630 GALNT15 (ENSBIXG00005014657) #26 ANKRD28 (ENSBIXG00005014993) #27 BTD (ENSBIXG00005015145) #28 HACL1 (ENSBIXG00005015316) #29 COLQ (ENSBIXG00005006233) #30 EAF1 (ENSBIXG00005002299) #31 METTL6 (ENSBIXG00005015538) #32 SH3BP5 (ENSBIXG00005015583) #33 CAPN7 (ENSBIXG00005015610) #34 ENSBIXG00005002441 COL6A5 (ENSBIXG00005015760) Cow MODERN SPECIES ENSBTAG00000040393 PRDM9 (ENSBTAG00000004538) ZNF596 (ENSBTAG00000049158) ENSBTAG00000047076 SGO1 (ENSBTAG00000000752) #13 KAT2B (ENSBTAG00000000746) #14 PP2D1 (ENSBTAG00000004061) #15 RAB5A (ENSBTAG00000046385) #16 EFHB (ENSBTAG00000013806) #17 ENSBTAG00000047978 KCNH8 (ENSBTAG00000012798) #18 SATB1 (ENSBTAG00000021158) #19 TBC1D5 (ENSBTAG00000030581) #20 ENSBTAG00000049193 PLCL2 (ENSBTAG00000009942) #21 DAZL (ENSBTAG00000000502) #22 ENSBTAG00000051752 #23 RFTN1 (ENSBTAG00000030593) #23 OXNAD1 (ENSBTAG00000004891) #24 ENSBTAG00000053091 DPH3 (ENSBTAG00000003916) #25 ENSBTAG00000051065 GALNT15 (ENSBTAG00000008240) #26 ANKRD28 (ENSBTAG00000024815) #27 BTD (ENSBTAG00000019129) #28 HACL1 (ENSBTAG00000003718) #29 COLQ (ENSBTAG00000040193) COLQ (ENSBTAG00000051541) #30 EAF1 (ENSBTAG00000019202) #31 METTL6 (ENSBTAG00000023375) #32 ENSBTAG00000030592 American bison MODERN SPECIES 3288 KAT2B (ENSBBBG00000001812) #14 PP2D1 (ENSBBBG00000010399) #15 RAB5A (ENSBBBG00000010394) #16 EFHB (ENSBBBG00000010382) #17 ENSBBBG00000010362 ENSBBBG00000010360 ENSBBBG00000010354 ENSBBBG00000010352 KCNH8 (ENSBBBG00000010348) #18 ENSBBBG00000010337 ENSBBBG00000010335 ENSBBBG00000010332 SATB1 (ENSBBBG00000010327) #19 TBC1D5 (ENSBBBG00000010308) #20 PLCL2 (ENSBBBG00000010278) #21 ENSBBBG00000007878 #22 ENSBBBG00000000039 #23 ENSBBBG00000000041 #23 OXNAD1 (ENSBBBG00000000045) #24 DPH3 (ENSBBBG00000000067) #25 ENSBBBG00000000073 GALNT15 (ENSBBBG00000000086) #26 ANKRD28 (ENSBBBG00000010251) #27 BTD (ENSBBBG00000010234) #28 HACL1 (ENSBBBG00000010217) #29 ENSBBBG00000010128 COLQ (ENSBBBG00000010123) #30 EAF1 (ENSBBBG00000010116) #31 METTL6 (ENSBBBG00000010111) #32 SH3BP5 (ENSBBBG00000010106) #33 CAPN7 (ENSBBBG00000010094) #34 Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES ENSGT00530000063480.b.c #22 Goat MODERN SPECIES 7 ENSCHIG00000011366 AHCTF1 (ENSCHIG00000023392) ENSCHIG00000010278 CDC42BPA (ENSCHIG00000021878) COQ8A (ENSCHIG00000012633) PSEN2 (ENSCHIG00000025180) ITPKB (ENSCHIG00000016348) STUM (ENSCHIG00000026813) PARP1 (ENSCHIG00000018072) LIN9 (ENSCHIG00000003005) MIXL1 (ENSCHIG00000017640) ACBD3 (ENSCHIG00000010539) ENSCHIG00000021907 ENSCHIG00000013022 SDE2 (ENSCHIG00000022358) ENSCHIG00000016605 #22 ENSCHIG00000010623 PYCR2 (ENSCHIG00000022032) ENSCHIG00000017375 TMEM63A (ENSCHIG00000026549) EPHX1 (ENSCHIG00000017919) SRP9 (ENSCHIG00000006407) ENSCHIG00000004057 ENSCHIG00000000542 ENAH (ENSCHIG00000022407) LBR (ENSCHIG00000013607) DNAH14 (ENSCHIG00000021801) CNIH3 (ENSCHIG00000015311) ENSCHIG00000008380 WDR26 (ENSCHIG00000020527) CNIH4 (ENSCHIG00000014392) Caprinae ANCESTRAL SPECIES 8 ENSGT00940000158211.y.a.a.a ENSGT00940000154559.C ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b.d #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000162990 ENSGT00940000164180 ENSGT00940000155619 Rambouillet Sheep MODERN SPECIES ENSOARG00020000700 ZNF596 (ENSOARG00020000680) ENSOARG00020000663 SGO1 (ENSOARG00020000404) #13 KAT2B (ENSOARG00020000211) #14 RAB5A (ENSOARG00020000129) #16 EFHB (ENSOARG00020000122) #17 SATB1 (ENSOARG00020022035) #19 TBC1D5 (ENSOARG00020021801) #20 PLCL2 (ENSOARG00020021690) #21 ENSOARG00020021565 #22 RFTN1 (ENSOARG00020021528) #23 OXNAD1 (ENSOARG00020021467) #24 ENSOARG00020021433 ANKRD28 (ENSOARG00020020797) #27 ENSOARG00020020758 BTD (ENSOARG00020020641) #28 HACL1 (ENSOARG00020020063) #29 COLQ (ENSOARG00020019567) #30 EAF1 (ENSOARG00020019515) #31 METTL6 (ENSOARG00020019436) #32 SH3BP5 (ENSOARG00020019355) #33 CAPN7 (ENSOARG00020019235) #34 COL6A5 (ENSOARG00020019139) COL6A6 (ENSOARG00020018833) PIK3R4 (ENSOARG00020018400) Goat MODERN SPECIES ENSCHIG00000026346 ZNF596 (ENSCHIG00000023889) SGO1 (ENSCHIG00000013739) #13 KAT2B (ENSCHIG00000022776) #14 PP2D1 (ENSCHIG00000017933) #15 RAB5A (ENSCHIG00000025419) #16 EFHB (ENSCHIG00000013082) #17 KCNH8 (ENSCHIG00000018810) #18 SATB1 (ENSCHIG00000023143) #19 TBC1D5 (ENSCHIG00000022282) #20 PLCL2 (ENSCHIG00000010205) #21 DAZL (ENSCHIG00000017877) #22 RFTN1 (ENSCHIG00000013091) #23 OXNAD1 (ENSCHIG00000027046) #24 DPH3 (ENSCHIG00000016516) #25 GALNT15 (ENSCHIG00000012848) #26 ANKRD28 (ENSCHIG00000022112) #27 BTD (ENSCHIG00000014947) #28 HACL1 (ENSCHIG00000013034) #29 COLQ (ENSCHIG00000012168) #30 EAF1 (ENSCHIG00000024831) #31 METTL6 (ENSCHIG00000021242) #32 SH3BP5 (ENSCHIG00000007654) #33 CAPN7 (ENSCHIG00000022356) #34 COL6A5 (ENSCHIG00000010899) ENSCHIG00000027271 COL6A6 (ENSCHIG00000018630) Cetacea ANCESTRAL SPECIES 10 ENSGT00940000159705 #9 ENSGT00940000156415.d #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00900000141074.l ENSGT00390000008096.A #19 ENSGT00390000007149.l ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.h #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00950000182988.a.a.q ENSGT00940000162990 ENSGT00940000155619 Blue whale MODERN SPECIES 15 UBE2E2 (ENSBMSG00010001542) #11 ENSBMSG00010001558 ZNF385D (ENSBMSG00010001563) #12 SGO1 (ENSBMSG00010001587) #13 KAT2B (ENSBMSG00010001643) #14 ENSBMSG00010001678 PP2D1 (ENSBMSG00010001686) #15 RAB5A (ENSBMSG00010001697) #16 EFHB (ENSBMSG00010001716) #17 KCNH8 (ENSBMSG00010001759) #18 ENSBMSG00010001776 SATB1 (ENSBMSG00010001793) #19 ENSBMSG00010001810 TBC1D5 (ENSBMSG00010001844) #20 PLCL2 (ENSBMSG00010002116) #21 ENSBMSG00010002140 #22 RFTN1 (ENSBMSG00010002183) #23 OXNAD1 (ENSBMSG00010002208) #24 ENSBMSG00010002225 #25 GALNT15 (ENSBMSG00010002234) #26 ANKRD28 (ENSBMSG00010002267) #27 BTD (ENSBMSG00010002337) #28 HACL1 (ENSBMSG00010002421) #29 COLQ (ENSBMSG00010002575) #30 EAF1 (ENSBMSG00010002751) #31 METTL6 (ENSBMSG00010002767) #32 SH3BP5 (ENSBMSG00010002776) #33 ENSBMSG00010002789 CAPN7 (ENSBMSG00010002796) #34 ENSBMSG00010002810 COL6A5 (ENSBMSG00010002820) Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00990000211206 ENSGT00940000156869 #18 ENSGT00940000160286.u.b ENSGT00390000008096.A #19 ENSGT00940000167974.d ENSGT00390000007149.l ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.h #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00950000182988.a.a.q ENSGT00940000162990 ENSGT00940000155619 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00990000211206 ENSGT00940000156869 #18 ENSGT00940000160286.u.b ENSGT00390000008096.A #19 ENSGT00940000167974.d ENSGT00390000007149.l ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.h #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00950000182988.a.a.q ENSGT00940000162990 ENSGT00940000155619 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000012818.o.a.a.a.a.c.b ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00990000211206 ENSGT00940000156869 #18 ENSGT00940000160286.u.b ENSGT00390000008096.A #19 ENSGT00940000167974.d ENSGT00390000007149.l ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.h #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00950000182988.a.a.q ENSGT00940000162990 ENSGT00940000155619 Monodontidae ANCESTRAL SPECIES 23 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000012818.o.a.a.a.a.c.b ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00990000211206 ENSGT00940000156869 #18 ENSGT00940000160286.u.b ENSGT00390000008096.A #19 ENSGT00390000007149.l ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225.h #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00910000144184.r.a.b ##8 ENSGT00940000162990 ENSGT00940000155619 Narwhal MODERN SPECIES 297 ZNF385D (ENSMMNG00015011111) #12 SGO1 (ENSMMNG00015011082) #13 KAT2B (ENSMMNG00015011041) #14 PP2D1 (ENSMMNG00015011021) #15 RAB5A (ENSMMNG00015011002) #16 EFHB (ENSMMNG00015010970) #17 ENSMMNG00015010961 ENSMMNG00015010952 KCNH8 (ENSMMNG00015010929) #18 ENSMMNG00015010903 SATB1 (ENSMMNG00015010870) #19 ENSMMNG00015010848 TBC1D5 (ENSMMNG00015010791) #20 PLCL2 (ENSMMNG00015010765) #21 ENSMMNG00015010745 ENSMMNG00015010705 #22 RFTN1 (ENSMMNG00015010679) #23 OXNAD1 (ENSMMNG00015010649) #24 ENSMMNG00015010634 #25 GALNT15 (ENSMMNG00015010623) #26 ANKRD28 (ENSMMNG00015010516) #27 BTD (ENSMMNG00015010445) #28 HACL1 (ENSMMNG00015010128) #29 EAF1 (ENSMMNG00015009972) #31 METTL6 (ENSMMNG00015009949) #32 SH3BP5 (ENSMMNG00015009931) #33 CAPN7 (ENSMMNG00015009911) #34 ENSMMNG00015009902 ENSMMNG00015009901 ##8 COL6A5 (ENSMMNG00015009886) COL6A6 (ENSMMNG00015009859) Beluga whale MODERN SPECIES 18 PLCL2 (ENSDLEG00000007213) #21 ENSDLEG00000007223 #22 RFTN1 (ENSDLEG00000007243) #23 OXNAD1 (ENSDLEG00000007252) #24 DPH3 (ENSDLEG00000007255) #25 GALNT15 (ENSDLEG00000007259) #26 ANKRD28 (ENSDLEG00000007274) #27 BTD (ENSDLEG00000007312) #28 HACL1 (ENSDLEG00000007320) #29 COLQ (ENSDLEG00000007339) #30 EAF1 (ENSDLEG00000007366) #31 METTL6 (ENSDLEG00000007375) #32 SH3BP5 (ENSDLEG00000007381) #33 CAPN7 (ENSDLEG00000007395) #34 ENSDLEG00000007406 ##8 ENSDLEG00000007410 ENSDLEG00000007417 Vaquita MODERN SPECIES 15 ZNF385D (ENSPSNG00000004270) #12 SGO1 (ENSPSNG00000004303) #13 KAT2B (ENSPSNG00000004333) #14 ENSPSNG00000004378 PP2D1 (ENSPSNG00000004395) #15 ENSPSNG00000004424 #16 EFHB (ENSPSNG00000005780) #17 ENSPSNG00000005865 KCNH8 (ENSPSNG00000005906) #18 ENSPSNG00000005960 SATB1 (ENSPSNG00000005991) #19 ENSPSNG00000006021 ENSPSNG00000006034 TBC1D5 (ENSPSNG00000006070) #20 PLCL2 (ENSPSNG00000006137) #21 ENSPSNG00000006191 #22 RFTN1 (ENSPSNG00000006302) #23 OXNAD1 (ENSPSNG00000006384) #24 GALNT15 (ENSPSNG00000006494) #26 ANKRD28 (ENSPSNG00000006571) #27 BTD (ENSPSNG00000006709) #28 HACL1 (ENSPSNG00000006877) #29 COLQ (ENSPSNG00000007053) #30 EAF1 (ENSPSNG00000007176) #31 METTL6 (ENSPSNG00000007214) #32 SH3BP5 (ENSPSNG00000007274) #33 CAPN7 (ENSPSNG00000007360) #34 ENSPSNG00000007439 COL6A5 (ENSPSNG00000007479) COL6A6 (ENSPSNG00000007661) PIK3R4 (ENSPSNG00000007901) Dolphin MODERN SPECIES 3037 ENSTTRG00000012649 #22 Sperm whale MODERN SPECIES UBE2E2 (ENSPCTG00005002250) #11 ZNF385D (ENSPCTG00005002168) #12 SGO1 (ENSPCTG00005002136) #13 KAT2B (ENSPCTG00005002112) #14 PP2D1 (ENSPCTG00005002090) #15 RAB5A (ENSPCTG00005002067) #16 EFHB (ENSPCTG00005002045) #17 ENSPCTG00005002029 KCNH8 (ENSPCTG00005002008) #18 ENSPCTG00005001988 SATB1 (ENSPCTG00005001955) #19 ENSPCTG00005001947 ENSPCTG00005001940 TBC1D5 (ENSPCTG00005001824) #20 PLCL2 (ENSPCTG00005001792) #21 ENSPCTG00005001768 #22 RFTN1 (ENSPCTG00005001747) #23 OXNAD1 (ENSPCTG00005001722) #24 DPH3 (ENSPCTG00005001706) #25 GALNT15 (ENSPCTG00005001677) #26 ANKRD28 (ENSPCTG00005001558) #27 BTD (ENSPCTG00005001503) #28 HACL1 (ENSPCTG00005001391) #29 EAF1 (ENSPCTG00005001335) #31 METTL6 (ENSPCTG00005001309) #32 SH3BP5 (ENSPCTG00005001266) #33 CAPN7 (ENSPCTG00005001222) #34 ENSPCTG00005001200 ENSPCTG00005001195 ##8 COL6A5 (ENSPCTG00005001123) COL6A6 (ENSPCTG00005001039) Atlantogenata ANCESTRAL SPECIES 58 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 Xenarthra ANCESTRAL SPECIES 1028 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 Armadillo MODERN SPECIES 2551 PLCL2 (ENSDNOG00000048022) #21 ENSDNOG00000044775 ENSDNOG00000019085 #22 RFTN1 (ENSDNOG00000032015) #23 ENSDNOG00000039709 OXNAD1 (ENSDNOG00000000768) #24 DPH3 (ENSDNOG00000012030) #25 Sloth MODERN SPECIES 138 ENSCHOG00000005264 #22 Afrotheria ANCESTRAL SPECIES 70 ENSGT00910000144184.q.a ##8 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 Tenrec MODERN SPECIES 8906 ENSETEG00000004434 #22 Afrotheria_a ANCESTRAL SPECIES 67 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000169676 ENSGT00940000156869 #18 ENSGT00390000008096.A #19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 Elephant MODERN SPECIES 348 RPL15 (ENSLAFG00000004155) #8 NKIRAS1 (ENSLAFG00000004153) #9 UBE2E1 (ENSLAFG00000004150) #10 UBE2E2 (ENSLAFG00000010500) #11 SGO1 (ENSLAFG00000032470) #13 KAT2B (ENSLAFG00000006300) #14 PP2D1 (ENSLAFG00000008322) #15 RAB5A (ENSLAFG00000008321) #16 EFHB (ENSLAFG00000008317) #17 ENSLAFG00000028706 KCNH8 (ENSLAFG00000000251) #18 SATB1 (ENSLAFG00000009015) #19 ENSLAFG00000028726 #20 ENSLAFG00000005895 #20 PLCL2 (ENSLAFG00000015491) #21 ENSLAFG00000009132 #22 ENSLAFG00000009129 #23 OXNAD1 (ENSLAFG00000009127) #24 ENSLAFG00000025650 #25 GALNT15 (ENSLAFG00000018400) #26 Hyrax MODERN SPECIES 9298 ENSPCAG00000016182 #22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.nb.a #11 ENSGT00940000155985.ob #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.nb.a #11 ENSGT00940000155985.ob #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.h #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00390000017724.a.a.b #31 ENSGT00390000017724.a.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 Diprotodontia ANCESTRAL SPECIES 18 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.nb.a #11 ENSGT00940000155985.ob #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.h #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00390000017724.a.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 ENSGT00940000155619 Diprotodontia_a ANCESTRAL SPECIES 20 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.nb.a #11 ENSGT00940000155985.ob #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.h #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00390000017724.a.a.a.a #31 ENSGT00940000156679 #32 ENSGT00390000018500.b #33 ENSGT00940000155892 #34 ENSGT00940000163168 ENSGT00940000162990 ENSGT00940000164180 ENSGT00940000155619 koala MODERN SPECIES 28 ENSPCIG00000037083 KAT2B (ENSPCIG00000018318) #14 ENSPCIG00000018319 #15 RAB5A (ENSPCIG00000018321) #16 EFHB (ENSPCIG00000018324) #17 KCNH8 (ENSPCIG00000018327) #18 ENSPCIG00000011063 ##19 TBC1D5 (ENSPCIG00000028315) #20 PLCL2 (ENSPCIG00000028319) #21 ENSPCIG00000033048 ENSPCIG00000028322 #22 RFTN1 (ENSPCIG00000034556) #23 ENSPCIG00000033229 OXNAD1 (ENSPCIG00000028177) #24 ENSPCIG00000028178 #25 GALNT15 (ENSPCIG00000028179) #26 ANKRD28 (ENSPCIG00000027832) #27 ENSPCIG00000032970 #28 HACL1 (ENSPCIG00000027834) #29 ENSPCIG00000027839 #31 METTL6 (ENSPCIG00000027841) #32 SH3BP5 (ENSPCIG00000027843) #33 CAPN7 (ENSPCIG00000027846) #34 ENSPCIG00000035105 ENSPCIG00000027854 ENSPCIG00000027858 Common wonbat MODERN SPECIES 1036 NKIRAS1 (ENSVURG00010022410) #9 UBE2E1 (ENSVURG00010022407) #10 UBE2E2 (ENSVURG00010022402) #11 ENSVURG00010022399 #11 ZNF385D (ENSVURG00010022375) #12 ENSVURG00010022364 #13 KAT2B (ENSVURG00010022260) #14 ENSVURG00010022246 #15 RAB5A (ENSVURG00010022243) #16 EFHB (ENSVURG00010022239) #17 KCNH8 (ENSVURG00010022228) #18 ENSVURG00010022223 ##19 TBC1D5 (ENSVURG00010022214) #20 ENSVURG00010022210 PLCL2 (ENSVURG00010022207) #21 ENSVURG00010022194 #22 ENSVURG00010022189 #23 OXNAD1 (ENSVURG00010022184) #24 ENSVURG00010022180 GALNT15 (ENSVURG00010022172) #26 ANKRD28 (ENSVURG00010022148) #27 BTD (ENSVURG00010022127) #28 HACL1 (ENSVURG00010022114) #29 ENSVURG00010022112 #31 METTL6 (ENSVURG00010022110) #32 SH3BP5 (ENSVURG00010022104) #33 CAPN7 (ENSVURG00010022094) #34 ENSVURG00010022080 ENSVURG00010022059 ENSVURG00010022053 COL6A6 (ENSVURG00010022049) Wallaby MODERN SPECIES 10371 ENSMEUG00000007283 #22 Tasmanian devil MODERN SPECIES 4 NR1D2 (ENSSHAG00000001369) #7 ENSSHAG00000031281 ##8 ENSSHAG00000023165 #9 UBE2E1 (ENSSHAG00000025127) #10 UBE2E2 (ENSSHAG00000015850) #11 ENSSHAG00000026012 ENSSHAG00000008910 #13 KAT2B (ENSSHAG00000008162) #14 ENSSHAG00000007207 #15 RAB5A (ENSSHAG00000029470) #16 ENSSHAG00000006023 #17 KCNH8 (ENSSHAG00000008165) #18 ENSSHAG00000015368 ##19 TBC1D5 (ENSSHAG00000011231) #20 PLCL2 (ENSSHAG00000007849) #21 ENSSHAG00000005944 #22 RFTN1 (ENSSHAG00000001247) #23 OXNAD1 (ENSSHAG00000031847) #24 ENSSHAG00000027017 GALNT15 (ENSSHAG00000020534) #26 ANKRD28 (ENSSHAG00000002238) #27 BTD (ENSSHAG00000031301) #28 HACL1 (ENSSHAG00000003429) #29 COLQ (ENSSHAG00000026105) #30 ENSSHAG00000006597 #31 METTL6 (ENSSHAG00000006443) #32 ENSSHAG00000028238 #33 ENSSHAG00000003266 #34 ENSSHAG00000000658 ENSSHAG00000022509 COL6A6 (ENSSHAG00000008975) Opossum MODERN SPECIES 7 ENSMODG00000043390 ZNF385D (ENSMODG00000014827) #12 ENSMODG00000024004 ENSMODG00000027500 ENSMODG00000048186 ENSMODG00000014812 #13 KAT2B (ENSMODG00000014806) #14 ENSMODG00000014795 #15 RAB5A (ENSMODG00000014793) #16 ENSMODG00000014789 #17 ENSMODG00000027853 KCNH8 (ENSMODG00000014786) #18 ENSMODG00000014765 ##19 TBC1D5 (ENSMODG00000014750) #20 PLCL2 (ENSMODG00000014736) #21 ENSMODG00000014730 #22 RFTN1 (ENSMODG00000014607) #23 OXNAD1 (ENSMODG00000014601) #24 ENSMODG00000025472 #25 ENSMODG00000037052 #26 ENSMODG00000014591 ANKRD28 (ENSMODG00000014582) #27 BTD (ENSMODG00000014571) #28 ENSMODG00000014566 #29 COLQ (ENSMODG00000014557) #30 EAF1 (ENSMODG00000014543) #31 METTL6 (ENSMODG00000014536) #32 SH3BP5 (ENSMODG00000014532) #33 CAPN7 (ENSMODG00000014524) #34 ENSMODG00000029678 ENSMODG00000028047 Platypus MODERN SPECIES 19 RPL15 (ENSOANG00000045456) #7 NKIRAS1 (ENSOANG00000039878) #9 UBE2E1 (ENSOANG00000044336) #10 UBE2E2 (ENSOANG00000021185) #11 ENSOANG00000041958 #11 ENSOANG00000048187 ZNF385D (ENSOANG00000004985) #12 ENSOANG00000004986 #13 KAT2B (ENSOANG00000004987) #14 ENSOANG00000004988 #15 RAB5A (ENSOANG00000004989) #16 KCNH8 (ENSOANG00000004990) #18 ENSOANG00000004992 ##19 TBC1D5 (ENSOANG00000004993) #20 PLCL2 (ENSOANG00000011166) #21 ENSOANG00000006742 #22 RFTN1 (ENSOANG00000006743) #23 ENSOANG00000006744 #24 DPH3 (ENSOANG00000036430) #25 ENSOANG00000006745 GALNT15 (ENSOANG00000006746) #26 ANKRD28 (ENSOANG00000006747) #27 ENSOANG00000048515 #28 HACL1 (ENSOANG00000006750) #29 COLQ (ENSOANG00000048600) #30 EAF1 (ENSOANG00000006754) #31 METTL6 (ENSOANG00000006755) #32 SH3BP5 (ENSOANG00000006756) #33 CAPN7 (ENSOANG00000006757) #34 ENSOANG00000006760 COL6A6 (ENSOANG00000006761) Sauria ANCESTRAL SPECIES 15 ENSGT00390000005421 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.j ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 Archosauria ANCESTRAL SPECIES ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a Aves ANCESTRAL SPECIES 5 ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a Neognathae ANCESTRAL SPECIES ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Neognathae_b ANCESTRAL SPECIES 9 ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT01080000259642 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Golden eagle MODERN SPECIES 19 THRB (ENSACCG00020012126) NR1D2 (ENSACCG00020012176) #7 RPL15 (ENSACCG00020012212) ##8 NKIRAS1 (ENSACCG00020012236) #9 UBE2E2 (ENSACCG00020012314) #11 ZNF385D (ENSACCG00020012382) #12 ENSACCG00020012400 KAT2B (ENSACCG00020012524) #14 PP2D1 (ENSACCG00020012744) #15 RAB5A (ENSACCG00020012757) #16 ENSACCG00020012772 KCNH8 (ENSACCG00020012790) #18 ENSACCG00020012827 ##19 TBC1D5 (ENSACCG00020012882) #20 PLCL2 (ENSACCG00020012951) #21 ENSACCG00020012975 #22 RFTN1 (ENSACCG00020013002) #23 OXNAD1 (ENSACCG00020013025) #24 DPH3 (ENSACCG00020013042) #25 GALNT15 (ENSACCG00020013056) #26 ANKRD28 (ENSACCG00020013115) #27 BTD (ENSACCG00020013145) #28 HACL1 (ENSACCG00020013198) #29 COLQ (ENSACCG00020013232) #30 PLEKHA8 (ENSACCG00020013248) FKBP14 (ENSACCG00020013297) SCRN1 (ENSACCG00020013307) WIPF3 (ENSACCG00020013321) ENSACCG00020013336 CHN2 (ENSACCG00020013356) ENSACCG00020013394 Kakapo MODERN SPECIES RARB (ENSSHBG00005002841) THRB (ENSSHBG00005002803) NR1D2 (ENSSHBG00005002772) #7 RPL15 (ENSSHBG00005002753) ##8 NKIRAS1 (ENSSHBG00005002739) #9 UBE2E1 (ENSSHBG00005002683) #10 ZNF385D (ENSSHBG00005002626) #12 ENSSHBG00005002607 #13 KAT2B (ENSSHBG00005002267) #14 RAB5A (ENSSHBG00005002167) #16 ENSSHBG00005002156 KCNH8 (ENSSHBG00005002135) #18 ENSSHBG00005002053 ##19 TBC1D5 (ENSSHBG00005002014) #20 PLCL2 (ENSSHBG00005001968) #21 ENSSHBG00005001940 #22 RFTN1 (ENSSHBG00005001920) #23 OXNAD1 (ENSSHBG00005001891) #24 DPH3 (ENSSHBG00005001859) #25 GALNT15 (ENSSHBG00005001840) #26 ANKRD28 (ENSSHBG00005001812) #27 BTD (ENSSHBG00005001779) #28 HACL1 (ENSSHBG00005001594) #29 COLQ (ENSSHBG00005001473) #30 PLEKHA8 (ENSSHBG00005001444) FKBP14 (ENSSHBG00005001421) SCRN1 (ENSSHBG00005001403) WIPF3 (ENSSHBG00005001360) ENSSHBG00005001346 CHN2 (ENSSHBG00005001335) ENSSHBG00005001318 Passeriformes ANCESTRAL SPECIES ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Passeriformes_d ANCESTRAL SPECIES ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121.b #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Flycatcher MODERN SPECIES 286 ENSFALG00000008893 #22 RFTN1 (ENSFALG00000028089) #23 OXNAD1 (ENSFALG00000008868) #24 Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121.b #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121.b #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Common canary MODERN SPECIES 5 THRB (ENSSCAG00000015306) NR1D2 (ENSSCAG00000015303) #7 RPL15 (ENSSCAG00000015297) ##8 NKIRAS1 (ENSSCAG00000015293) #9 UBE2E1 (ENSSCAG00000015288) #10 UBE2E2 (ENSSCAG00000015285) #11 ZNF385D (ENSSCAG00000015281) #12 SGO1 (ENSSCAG00000015278) #13 KAT2B (ENSSCAG00000015226) #14 RAB5A (ENSSCAG00000015213) #16 ENSSCAG00000015212 KCNH8 (ENSSCAG00000015206) #18 ENSSCAG00000015196 ##19 TBC1D5 (ENSSCAG00000015186) #20 PLCL2 (ENSSCAG00000015180) #21 ENSSCAG00000015174 #22 RFTN1 (ENSSCAG00000015166) #23 OXNAD1 (ENSSCAG00000015162) #24 DPH3 (ENSSCAG00000015155) #25 GALNT15 (ENSSCAG00000015152) #26 ANKRD28 (ENSSCAG00000015148) #27 BTD (ENSSCAG00000015144) #28 HACL1 (ENSSCAG00000015140) #29 PLEKHA8 (ENSSCAG00000015137) FKBP14 (ENSSCAG00000015135) SCRN1 (ENSSCAG00000015131) WIPF3 (ENSSCAG00000015128) ENSSCAG00000015122 CHN2 (ENSSCAG00000015120) ENSSCAG00000015114 CREB5 (ENSSCAG00000015109) Zebra finch MODERN SPECIES 12 RARB (ENSTGUG00000003374) THRB (ENSTGUG00000018874) NR1D2 (ENSTGUG00000003335) #7 RPL15 (ENSTGUG00000025989) ##8 NKIRAS1 (ENSTGUG00000026551) #9 UBE2E1 (ENSTGUG00000003303) #10 ENSTGUG00000003279 SGO1 (ENSTGUG00000003277) #13 KAT2B (ENSTGUG00000003246) #14 RAB5A (ENSTGUG00000003236) #16 EFHB (ENSTGUG00000003223) #17 KCNH8 (ENSTGUG00000003211) #18 ENSTGUG00000003198 ##19 TBC1D5 (ENSTGUG00000003159) #20 PLCL2 (ENSTGUG00000003154) #21 ENSTGUG00000003145 #22 RFTN1 (ENSTGUG00000003139) #23 OXNAD1 (ENSTGUG00000003132) #24 GALNT15 (ENSTGUG00000003115) #26 ANKRD28 (ENSTGUG00000003060) #27 BTD (ENSTGUG00000023167) #28 HACL1 (ENSTGUG00000003040) #29 COLQ (ENSTGUG00000003015) #30 PLEKHA8 (ENSTGUG00000002993) FKBP14 (ENSTGUG00000029292) SCRN1 (ENSTGUG00000002975) WIPF3 (ENSTGUG00000002969) ENSTGUG00000026485 CHN2 (ENSTGUG00000026687) TRIL (ENSTGUG00000025309) CREB5 (ENSTGUG00000002959) Medium ground finch MODERN SPECIES 36 SGO1 (ENSGFOG00000006618) #13 KAT2B (ENSGFOG00000006661) #14 RAB5A (ENSGFOG00000007671) #16 ENSGFOG00000007686 KCNH8 (ENSGFOG00000007725) #18 ENSGFOG00000007747 ##19 TBC1D5 (ENSGFOG00000007796) #20 PLCL2 (ENSGFOG00000007823) #21 ENSGFOG00000007838 ENSGFOG00000007844 #22 RFTN1 (ENSGFOG00000007850) #23 OXNAD1 (ENSGFOG00000007863) #24 DPH3 (ENSGFOG00000007882) #25 GALNT15 (ENSGFOG00000007892) #26 ANKRD28 (ENSGFOG00000007988) #27 BTD (ENSGFOG00000009184) #28 HACL1 (ENSGFOG00000009191) #29 PLEKHA8 (ENSGFOG00000009202) FKBP14 (ENSGFOG00000009209) SCRN1 (ENSGFOG00000009219) CHN2 (ENSGFOG00000009230) ENSGFOG00000009247 CREB5 (ENSGFOG00000009281) JAZF1 (ENSGFOG00000009394) TAX1BP1 (ENSGFOG00000009405) Great tit MODERN SPECIES 11 NR1D2 (ENSPMJG00000003748) #7 RPL15 (ENSPMJG00000003746) ##8 NKIRAS1 (ENSPMJG00000003736) #9 UBE2E1 (ENSPMJG00000003728) #10 UBE2E2 (ENSPMJG00000003711) #11 ENSPMJG00000003694 ENSPMJG00000003683 SGO1 (ENSPMJG00000003626) #13 KAT2B (ENSPMJG00000003620) #14 RAB5A (ENSPMJG00000003611) #16 ENSPMJG00000003560 KCNH8 (ENSPMJG00000003557) #18 ENSPMJG00000003421 ##19 TBC1D5 (ENSPMJG00000003296) #20 PLCL2 (ENSPMJG00000002992) #21 ENSPMJG00000002924 #22 RFTN1 (ENSPMJG00000002904) #23 OXNAD1 (ENSPMJG00000002891) #24 DPH3 (ENSPMJG00000002879) #25 GALNT15 (ENSPMJG00000002873) #26 ANKRD28 (ENSPMJG00000002681) #27 BTD (ENSPMJG00000002679) #28 HACL1 (ENSPMJG00000002663) #29 COLQ (ENSPMJG00000002497) #30 PLEKHA8 (ENSPMJG00000002463) FKBP14 (ENSPMJG00000002458) SCRN1 (ENSPMJG00000002451) WIPF3 (ENSPMJG00000002436) ENSPMJG00000002419 ENSPMJG00000002395 CHN2 (ENSPMJG00000002367) Galloanserae ANCESTRAL SPECIES ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Anatidae ANCESTRAL SPECIES 1 ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000168259 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Duck MODERN SPECIES 10 NR1D2 (ENSAPLG00000005753) #7 RPL15 (ENSAPLG00000005626) ##8 NKIRAS1 (ENSAPLG00000005623) #9 ENSAPLG00000005577 UBE2E2 (ENSAPLG00000005567) #11 ZNF385D (ENSAPLG00000011365) #12 SGO1 (ENSAPLG00000012083) #13 KAT2B (ENSAPLG00000012109) #14 PP2D1 (ENSAPLG00000012677) #15 RAB5A (ENSAPLG00000020042) #16 ENSAPLG00000026271 KCNH8 (ENSAPLG00000013144) #18 ENSAPLG00000009362 ##19 TBC1D5 (ENSAPLG00000015790) #20 PLCL2 (ENSAPLG00000015653) #21 ENSAPLG00000007738 #22 RFTN1 (ENSAPLG00000007977) #23 OXNAD1 (ENSAPLG00000008159) #24 DPH3 (ENSAPLG00000008234) #25 GALNT15 (ENSAPLG00000010884) #26 ANKRD28 (ENSAPLG00000002501) #27 BTD (ENSAPLG00000003612) #28 HACL1 (ENSAPLG00000003680) #29 COLQ (ENSAPLG00000004158) #30 PLEKHA8 (ENSAPLG00000004301) FKBP14 (ENSAPLG00000004374) SCRN1 (ENSAPLG00000004515) WIPF3 (ENSAPLG00000028949) ENSAPLG00000021266 CHN2 (ENSAPLG00000004770) TRIL (ENSAPLG00000027101) Pink-footed goose MODERN SPECIES NR1D2 (ENSABRG00000006583) #7 RPL15 (ENSABRG00000006590) ##8 NKIRAS1 (ENSABRG00000006597) #9 UBE2E1 (ENSABRG00000006620) #10 UBE2E2 (ENSABRG00000006641) #11 ZNF385D (ENSABRG00000006672) #12 SGO1 (ENSABRG00000006726) #13 KAT2B (ENSABRG00000006750) #14 PP2D1 (ENSABRG00000006767) #15 RAB5A (ENSABRG00000006776) #16 ENSABRG00000006786 KCNH8 (ENSABRG00000006793) #18 ENSABRG00000006820 ##19 TBC1D5 (ENSABRG00000006845) #20 PLCL2 (ENSABRG00000006870) #21 ENSABRG00000006879 #22 RFTN1 (ENSABRG00000006885) #23 OXNAD1 (ENSABRG00000006891) #24 DPH3 (ENSABRG00000006895) #25 GALNT15 (ENSABRG00000006903) #26 ANKRD28 (ENSABRG00000007037) #27 BTD (ENSABRG00000008195) #28 HACL1 (ENSABRG00000008288) #29 COLQ (ENSABRG00000009915) #30 PLEKHA8 (ENSABRG00000009927) FKBP14 (ENSABRG00000009950) SCRN1 (ENSABRG00000009959) WIPF3 (ENSABRG00000009966) ENSABRG00000009970 CHN2 (ENSABRG00000009976) TRIL (ENSABRG00000009999) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.r ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000161975 Turkey MODERN SPECIES 26 ENSMGAG00000019537 CHN2 (ENSMGAG00000010748) ENSMGAG00000010774 ENSMGAG00000010766 FKBP14 (ENSMGAG00000010782) ENSMGAG00000010801 #30 ENSMGAG00000010790 ANKRD28 (ENSMGAG00000010846) #27 ENSMGAG00000010836 #28 HACL1 (ENSMGAG00000010817) #29 ENSMGAG00000019530 OXNAD1 (ENSMGAG00000010908) #24 ENSMGAG00000020455 #25 GALNT15 (ENSMGAG00000010891) #26 ENSMGAG00000021001 #23 ENSMGAG00000010878 #22 ENSMGAG00000010925 #21 ENSMGAG00000018979 ENSMGAG00000018008 #20 ENSMGAG00000010929 ##19 ENSMGAG00000022453 ##19 ENSMGAG00000019703 #18 ENSMGAG00000010970 #17 ENSMGAG00000010977 ENSMGAG00000018288 #16 ENSMGAG00000010961 #16 ENSMGAG00000010957 #15 ENSMGAG00000010946 #14 ENSMGAG00000010990 #13 ENSMGAG00000010992 #12 ENSMGAG00000020242 Chicken MODERN SPECIES 11 NR1D2 (ENSGALG00010001528) #7 RPL15 (ENSGALG00010001698) ##8 NKIRAS1 (ENSGALG00010001693) #9 UBE2E1 (ENSGALG00010001668) #10 UBE2E2 (ENSGALG00010001649) #11 ZNF385D (ENSGALG00010001639) SGO1 (ENSGALG00010001783) #13 KAT2B (ENSGALG00010001778) #14 PP2D1 (ENSGALG00010001770) #15 RAB5A (ENSGALG00010001760) #16 EFHB (ENSGALG00010001750) #17 KCNH8 (ENSGALG00010001747) #18 SATB1 (ENSGALG00010001741) ##19 TBC1D5 (ENSGALG00010001521) #20 PLCL2 (ENSGALG00010001512) #21 DAZL (ENSGALG00010002294) #22 RFTN1 (ENSGALG00010002247) #23 OXNAD1 (ENSGALG00010002226) #24 DPH3P1 (ENSGALG00010002206) GALNT15 (ENSGALG00010002159) #26 ANKRD28 (ENSGALG00010002134) #27 BTD (ENSGALG00010002100) #28 HACL1 (ENSGALG00010002084) #29 COLQ (ENSGALG00010002005) #30 PLEKHA8 (ENSGALG00010001969) FKBP14 (ENSGALG00010001386) SCRN1 (ENSGALG00010001380) WIPF3 (ENSGALG00010001368) ENSGALG00010002631 CHN2 (ENSGALG00010001585) CHN2 (ENSGALG00010002992) Japanese quail MODERN SPECIES 11 NKIRAS1 (ENSCJPG00005012601) #9 UBE2E1 (ENSCJPG00005012600) #10 ENSCJPG00005012598 UBE2E2 (ENSCJPG00005012597) #11 ENSCJPG00005012595 ENSCJPG00005012593 SGO1 (ENSCJPG00005012590) #13 KAT2B (ENSCJPG00005012589) #14 PP2D1 (ENSCJPG00005012588) #15 RAB5A (ENSCJPG00005012587) #16 EFHB (ENSCJPG00005012586) #17 KCNH8 (ENSCJPG00005012584) #18 ENSCJPG00005012578 ##19 TBC1D5 (ENSCJPG00005012576) #20 PLCL2 (ENSCJPG00005012574) #21 ENSCJPG00005012572 #22 RFTN1 (ENSCJPG00005012571) #23 OXNAD1 (ENSCJPG00005012570) #24 ENSCJPG00005012569 GALNT15 (ENSCJPG00005012568) #26 ANKRD28 (ENSCJPG00005012567) #27 BTD (ENSCJPG00005012566) #28 HACL1 (ENSCJPG00005012565) #29 COLQ (ENSCJPG00005012564) #30 PLEKHA8 (ENSCJPG00005012563) FKBP14 (ENSCJPG00005012562) SCRN1 (ENSCJPG00005012561) WIPF3 (ENSCJPG00005012560) ENSCJPG00005012557 CHN2 (ENSCJPG00005012556) TRIL (ENSCJPG00005012555) African ostrich MODERN SPECIES 661 ZNF385D (ENSSCUG00000011007) #12 SGO1 (ENSSCUG00000011016) #13 KAT2B (ENSSCUG00000011021) #14 PP2D1 (ENSSCUG00000011031) #15 RAB5A (ENSSCUG00000011033) #16 EFHB (ENSSCUG00000011035) #17 KCNH8 (ENSSCUG00000011037) #18 ENSSCUG00000011041 ##19 TBC1D5 (ENSSCUG00000011046) #20 PLCL2 (ENSSCUG00000011057) #21 ENSSCUG00000011060 #22 RFTN1 (ENSSCUG00000011064) #23 OXNAD1 (ENSSCUG00000011070) #24 GALNT15 (ENSSCUG00000011075) #26 ANKRD28 (ENSSCUG00000006834) #27 BTD (ENSSCUG00000006840) #28 HACL1 (ENSSCUG00000006843) #29 COLQ (ENSSCUG00000006850) #30 PLEKHA8 (ENSSCUG00000006858) ENSSCUG00000006864 FKBP14 (ENSSCUG00000006867) ENSSCUG00000006869 SCRN1 (ENSSCUG00000006872) WIPF3 (ENSSCUG00000006876) CHN2 (ENSSCUG00000006879) ENSSCUG00000006886 Australian saltwater crocodile MODERN SPECIES RPL15 (ENSCPRG00005002146) #8 NKIRAS1 (ENSCPRG00005002143) #9 UBE2E1 (ENSCPRG00005002140) #10 UBE2E2 (ENSCPRG00005002088) #11 ENSCPRG00005002031 #11 ZNF385D (ENSCPRG00005001995) #12 SGO1 (ENSCPRG00005001911) #13 KAT2B (ENSCPRG00005001888) #14 PP2D1 (ENSCPRG00005001820) #15 RAB5A (ENSCPRG00005001816) #16 EFHB (ENSCPRG00005001810) #17 KCNH8 (ENSCPRG00005001753) #18 ENSCPRG00005001584 ##19 TBC1D5 (ENSCPRG00005001492) #20 PLCL2 (ENSCPRG00005001400) #21 ENSCPRG00005001314 #22 RFTN1 (ENSCPRG00005001258) #23 OXNAD1 (ENSCPRG00005001257) #24 ENSCPRG00005001251 ENSCPRG00005001181 GALNT15 (ENSCPRG00005001164) #26 ANKRD28 (ENSCPRG00005001048) #27 BTD (ENSCPRG00005001046) #28 HACL1 (ENSCPRG00005001008) #29 COLQ (ENSCPRG00005000945) #30 PLEKHA8 (ENSCPRG00005000855) FKBP14 (ENSCPRG00005000846) SCRN1 (ENSCPRG00005000841) ENSCPRG00005000834 ENSCPRG00005000780 CHN2 (ENSCPRG00005000773) Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000168259 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.j ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000168259 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.j ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288.i ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a Emydidae ANCESTRAL SPECIES 40 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.j ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288.i ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a painted turtle MODERN SPECIES 7 NKIRAS1 (ENSCPBG00000022583) #9 UBE2E1 (ENSCPBG00000022581) #10 UBE2E2 (ENSCPBG00000022578) #11 ENSCPBG00000022577 #11 ZNF385D (ENSCPBG00000022573) #12 SGO1 (ENSCPBG00000022568) #13 ENSCPBG00000022566 KAT2B (ENSCPBG00000022564) #14 PP2D1 (ENSCPBG00000022561) #15 RAB5A (ENSCPBG00000022559) #16 ENSCPBG00000022555 KCNH8 (ENSCPBG00000022553) #18 ENSCPBG00000022551 ##19 TBC1D5 (ENSCPBG00000022549) #20 PLCL2 (ENSCPBG00000022548) #21 ENSCPBG00000022547 #22 RFTN1 (ENSCPBG00000022546) #23 OXNAD1 (ENSCPBG00000022544) #24 DPH3 (ENSCPBG00000022542) #25 ENSCPBG00000022539 GALNT15 (ENSCPBG00000022536) #26 ANKRD28 (ENSCPBG00000022533) #27 BTD (ENSCPBG00000022532) #28 HACL1 (ENSCPBG00000022531) #29 COLQ (ENSCPBG00000022529) #30 FKBP14 (ENSCPBG00000022528) PLEKHA8 (ENSCPBG00000022526) SCRN1 (ENSCPBG00000022525) WIPF3 (ENSCPBG00000022524) ENSCPBG00000022523 CHN2 (ENSCPBG00000022522) Three-toed box turtle MODERN SPECIES 30 NKIRAS1 (ENSTMTG00000002614) #9 UBE2E1 (ENSTMTG00000002622) #10 ENSTMTG00000002627 #11 ENSTMTG00000002632 #11 ZNF385D (ENSTMTG00000002639) #12 ENSTMTG00000002647 #13 ENSTMTG00000002650 #13 KAT2B (ENSTMTG00000002662) #14 PP2D1 (ENSTMTG00000002725) #15 RAB5A (ENSTMTG00000002731) #16 ENSTMTG00000002737 KCNH8 (ENSTMTG00000002744) #18 ENSTMTG00000002760 ##19 TBC1D5 (ENSTMTG00000002777) #20 PLCL2 (ENSTMTG00000002794) #21 ENSTMTG00000002809 #22 RFTN1 (ENSTMTG00000002816) #23 OXNAD1 (ENSTMTG00000002822) #24 ENSTMTG00000002827 ENSTMTG00000002829 GALNT15 (ENSTMTG00000002833) #26 ANKRD28 (ENSTMTG00000002849) #27 BTD (ENSTMTG00000002858) #28 HACL1 (ENSTMTG00000002864) #29 COLQ (ENSTMTG00000002877) #30 PLEKHA8 (ENSTMTG00000002884) FKBP14 (ENSTMTG00000002892) SCRN1 (ENSTMTG00000002898) WIPF3 (ENSTMTG00000002904) ENSTMTG00000002909 CHN2 (ENSTMTG00000002915) Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.b #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000168259 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.j ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288.i ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a Abingdon island giant tortoise MODERN SPECIES 2166 ENSCABG00000019247 #22 ENSCABG00000019248 #23 ENSCABG00000019249 #23 OXNAD1 (ENSCABG00000019252) #24 ENSCABG00000019254 DPH3 (ENSCABG00000019256) #25 ENSCABG00000019257 GALNT15 (ENSCABG00000019258) #26 ANKRD28 (ENSCABG00000019265) #27 BTD (ENSCABG00000000062) #28 ENSCABG00000000089 #29 COLQ (ENSCABG00000000097) #30 ENSCABG00000000115 Goode s thornscrub tortoise MODERN SPECIES 11 NKIRAS1 (ENSGEVG00005008727) #9 UBE2E1 (ENSGEVG00005008700) #10 UBE2E2 (ENSGEVG00005008626) #11 ENSGEVG00005008603 #11 ZNF385D (ENSGEVG00005008544) #12 SGO1 (ENSGEVG00005008508) #13 KAT2B (ENSGEVG00005008098) #14 PP2D1 (ENSGEVG00005007987) #15 RAB5A (ENSGEVG00005007969) #16 ENSGEVG00005007928 KCNH8 (ENSGEVG00005007860) #18 ENSGEVG00005007813 ##19 ENSGEVG00005007789 TBC1D5 (ENSGEVG00005007756) #20 PLCL2 (ENSGEVG00005007731) #21 ENSGEVG00005007633 #22 RFTN1 (ENSGEVG00005007575) #23 OXNAD1 (ENSGEVG00005007535) #24 DPH3 (ENSGEVG00005007515) #25 ENSGEVG00005007483 GALNT15 (ENSGEVG00005007399) #26 ANKRD28 (ENSGEVG00005007323) #27 BTD (ENSGEVG00005007298) #28 HACL1 (ENSGEVG00005007204) #29 COLQ (ENSGEVG00005007145) #30 PLEKHA8 (ENSGEVG00005007118) FKBP14 (ENSGEVG00005007097) SCRN1 (ENSGEVG00005007049) WIPF3 (ENSGEVG00005007035) ENSGEVG00005007021 CHN2 (ENSGEVG00005006883) Chinese turtle MODERN SPECIES 1869 SLC35G1 (ENSPSIG00000013667) LGI1 (ENSPSIG00000012944) FRA10AC1 (ENSPSIG00000012938) ENSPSIG00000012927 TBC1D5 (ENSPSIG00000011227) #20 ENSPSIG00000011207 PLCL2 (ENSPSIG00000010239) #21 ENSPSIG00000009803 #22 ENSPSIG00000000358 RFTN1 (ENSPSIG00000009596) #23 OXNAD1 (ENSPSIG00000009446) #24 DPH3 (ENSPSIG00000009436) #25 ENSPSIG00000009434 GALNT15 (ENSPSIG00000007294) #26 ANKRD28 (ENSPSIG00000007250) #27 BTD (ENSPSIG00000006873) #28 HACL1 (ENSPSIG00000006662) #29 COLQ (ENSPSIG00000017995) #30 PLEKHA8 (ENSPSIG00000017798) FKBP14 (ENSPSIG00000017755) SCRN1 (ENSPSIG00000017453) WIPF3 (ENSPSIG00000017225) CHN2 (ENSPSIG00000016284) Lepidosauria ANCESTRAL SPECIES 5 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a ENSGT00940000159498 Episquamata ANCESTRAL SPECIES 5 ENSGT00940000155168.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 Toxicofera ANCESTRAL SPECIES 4 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT01080000259642 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.h.b ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 Elapidae ANCESTRAL SPECIES 5 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.bc.b #11 ENSGT00940000160242 #12 ENSGT01080000259642 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.h.b.b ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802.v #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 ENSGT00940000161975 Elapidae_a ANCESTRAL SPECIES 19 ENSGT00940000155168.a.b.o.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.bc.b #11 ENSGT00940000160242 #12 ENSGT01080000259642 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.h.b.b ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802.v #29 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 ENSGT00940000161975 ENSGT00940000156420 Blue-lipped sea krait MODERN SPECIES 5931 ENSLLTG00000009878 #22 Acanthophiinae ANCESTRAL SPECIES 19 ENSGT00940000155168.a.b.o.a.a #7 ENSGT00940000155168.a.b.o.a.b #7 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985.bc.b #11 ENSGT00940000160242 #12 ENSGT01080000259642 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00390000009313.h.b.b ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802.v #29 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 ENSGT00940000161975 ENSGT00940000156420 Eastern brown snake MODERN SPECIES 38 ENSPTXG00000015917 ##8 NKIRAS1 (ENSPTXG00000015918) #9 UBE2E1 (ENSPTXG00000015919) #10 UBE2E2 (ENSPTXG00000015920) #11 ZNF385D (ENSPTXG00000015922) #12 ENSPTXG00000015925 ENSPTXG00000015926 #14 PP2D1 (ENSPTXG00000015930) #15 RAB5A (ENSPTXG00000015932) #16 ENSPTXG00000015936 KCNH8 (ENSPTXG00000015941) #18 ENSPTXG00000015948 ##19 TBC1D5 (ENSPTXG00000015950) #20 PLCL2 (ENSPTXG00000015954) #21 ENSPTXG00000015957 ENSPTXG00000015959 #22 ENSPTXG00000015960 #23 ENSPTXG00000015962 #23 OXNAD1 (ENSPTXG00000015965) #24 DPH3 (ENSPTXG00000015967) #25 ENSPTXG00000015969 ANKRD28 (ENSPTXG00000015971) #27 BTD (ENSPTXG00000015972) #28 HACL1 (ENSPTXG00000015973) #29 PLEKHA8 (ENSPTXG00000015974) FKBP14 (ENSPTXG00000015975) SCRN1 (ENSPTXG00000015976) WIPF3 (ENSPTXG00000004460) CHN2 (ENSPTXG00000004466) CPVL (ENSPTXG00000004473) TRIL (ENSPTXG00000004476) Mainland tiger snake MODERN SPECIES 55 ZNF385D (ENSNSUG00000010394) #12 ENSNSUG00000010439 ENSNSUG00000010440 #14 PP2D1 (ENSNSUG00000010441) #15 RAB5A (ENSNSUG00000010442) #16 KCNH8 (ENSNSUG00000010443) #18 ENSNSUG00000010445 ##19 ENSNSUG00000010446 ##19 TBC1D5 (ENSNSUG00000010455) #20 PLCL2 (ENSNSUG00000011589) #21 ENSNSUG00000011599 #22 RFTN1 (ENSNSUG00000011600) #23 OXNAD1 (ENSNSUG00000011609) #24 DPH3 (ENSNSUG00000011618) #25 ENSNSUG00000011620 ANKRD28 (ENSNSUG00000011629) #27 BTD (ENSNSUG00000011653) #28 HACL1 (ENSNSUG00000011654) #29 PLEKHA8 (ENSNSUG00000011655) FKBP14 (ENSNSUG00000011656) SCRN1 (ENSNSUG00000011662) WIPF3 (ENSNSUG00000011665) CHN2 (ENSNSUG00000011669) ENSNSUG00000011671 CPVL (ENSNSUG00000011672) TRIL (ENSNSUG00000011812) Indian cobra MODERN SPECIES 337 ZNF385D (ENSNNAG00000007668) #12 ENSNNAG00000007619 ENSNNAG00000007592 ENSNNAG00000015681 #14 PP2D1 (ENSNNAG00000015660) #15 RAB5A (ENSNNAG00000015651) #16 EFHB (ENSNNAG00000015590) #17 ENSNNAG00000015574 KCNH8 (ENSNNAG00000015540) #18 ENSNNAG00000015529 ENSNNAG00000015522 ENSNNAG00000015494 ##19 ENSNNAG00000015482 TBC1D5 (ENSNNAG00000015447) #20 PLCL2 (ENSNNAG00000015430) #21 ENSNNAG00000015397 #22 ENSNNAG00000015382 #23 ENSNNAG00000015354 #23 OXNAD1 (ENSNNAG00000015333) #24 ENSNNAG00000015323 ENSNNAG00000015275 #27 ENSNNAG00000015267 #27 BTD (ENSNNAG00000015172) #28 HACL1 (ENSNNAG00000014939) #29 COLQ (ENSNNAG00000014887) #30 PLEKHA8 (ENSNNAG00000014846) FKBP14 (ENSNNAG00000014798) SCRN1 (ENSNNAG00000014772) WIPF3 (ENSNNAG00000014763) ENSNNAG00000014741 ENSNNAG00000014734 Lizard MODERN SPECIES 5 ZNF385D (ENSACAG00000000013) #12 ENSACAG00000043669 ENSACAG00000000014 #13 KAT2B (ENSACAG00000000015) #14 ENSACAG00000000016 #15 RAB5A (ENSACAG00000000017) #16 ENSACAG00000000018 KCNH8 (ENSACAG00000000019) #18 ENSACAG00000007941 ##19 ENSACAG00000012672 ENSACAG00000040617 TBC1D5 (ENSACAG00000007864) #20 ENSACAG00000037902 ENSACAG00000039364 PLCL2 (ENSACAG00000007836) #21 ENSACAG00000007822 #22 RFTN1 (ENSACAG00000007784) #23 OXNAD1 (ENSACAG00000007757) #24 DPH3 (ENSACAG00000007752) #25 ENSACAG00000007746 GALNT15 (ENSACAG00000007710) #26 ANKRD28 (ENSACAG00000002496) #27 BTD (ENSACAG00000002449) #28 HACL1 (ENSACAG00000002368) #29 COLQ (ENSACAG00000002275) #30 PLEKHA8 (ENSACAG00000000988) FKBP14 (ENSACAG00000000953) ENSACAG00000041098 SCRN1 (ENSACAG00000000877) WIPF3 (ENSACAG00000000853) ENSACAG00000003118 Laterata ANCESTRAL SPECIES 10 ENSGT00910000144184.q.a ##8 ENSGT00940000159705 #9 ENSGT00940000155611.s ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.a #13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000007225 #25 ENSGT00940000160808 #26 ENSGT00950000182908.C.p #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a ENSGT00940000159498 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 5 ENSSMRG00000011454 UBE2E2 (ENSSMRG00000011494) #11 ENSSMRG00000011496 ZNF385D (ENSSMRG00000011619) #12 SGO1 (ENSSMRG00000011637) #13 KAT2B (ENSSMRG00000011638) #14 PP2D1 (ENSSMRG00000011639) #15 RAB5A (ENSSMRG00000011640) #16 EFHB (ENSSMRG00000011641) #17 ENSSMRG00000011642 KCNH8 (ENSSMRG00000011744) #18 ENSSMRG00000011745 ENSSMRG00000011767 ##19 TBC1D5 (ENSSMRG00000011861) #20 PLCL2 (ENSSMRG00000000014) #21 ENSSMRG00000000066 #22 RFTN1 (ENSSMRG00000000291) #23 OXNAD1 (ENSSMRG00000000328) #24 DPH3 (ENSSMRG00000000343) #25 ENSSMRG00000000373 ANKRD28 (ENSSMRG00000000389) #27 BTD (ENSSMRG00000002412) #28 HACL1 (ENSSMRG00000002413) #29 COLQ (ENSSMRG00000002517) #30 PLEKHA8 (ENSSMRG00000002525) FKBP14 (ENSSMRG00000002542) SCRN1 (ENSSMRG00000002549) WIPF3 (ENSSMRG00000002554) ENSSMRG00000002559 CHN2 (ENSSMRG00000002579) ENSSMRG00000002597 Argentine black and white tegu MODERN SPECIES 30 ENSSMRG00000017879 EDEM1 (ENSSMRG00000017878) ARL8B (ENSSMRG00000017877) BHLHE40 (ENSSMRG00000017876) ITPR1 (ENSSMRG00000017870) SUMF1 (ENSSMRG00000017869) ENSSMRG00000017868 LRRN1 (ENSSMRG00000017865) CRBN (ENSSMRG00000017863) TRNT1 (ENSSMRG00000017861) ENSSMRG00000017860 CNTN4 (ENSSMRG00000017856) ENSSMRG00000017841 CNTN6 (ENSSMRG00000013978) CHL1 (ENSSMRG00000010197) ENSSMRG00000010180 #22 ENSSMRG00000010173 ENSSMRG00000010165 ENSSMRG00000010160 CNTN3 (ENSSMRG00000003298) ENSSMRG00000003187 PDZRN3 (ENSSMRG00000003119) ENSSMRG00000003079 GXYLT2 (ENSSMRG00000003071) SHQ1 (ENSSMRG00000003041) ENSSMRG00000002992 RYBP (ENSSMRG00000002983) PROK2 (ENSSMRG00000002900) GPR27 (ENSSMRG00000002896) EIF4E3 (ENSSMRG00000002895) ENSSMRG00000002882 Common wall lizard MODERN SPECIES 3 ENSPMRG00000021001 ENSPMRG00000020972 SGO1 (ENSPMRG00000020942) #13 ENSPMRG00000020927 #15 KAT2B (ENSPMRG00000020523) #14 ENSPMRG00000020429 #15 RAB5A (ENSPMRG00000020406) #16 EFHB (ENSPMRG00000020396) #17 KCNH8 (ENSPMRG00000020383) #18 ENSPMRG00000020377 ENSPMRG00000020366 ##19 ENSPMRG00000020361 TBC1D5 (ENSPMRG00000020314) #20 ENSPMRG00000020304 PLCL2 (ENSPMRG00000020299) #21 ENSPMRG00000020289 #22 RFTN1 (ENSPMRG00000020274) #23 OXNAD1 (ENSPMRG00000020264) #24 DPH3 (ENSPMRG00000020256) #25 GALNT15 (ENSPMRG00000020244) #26 ANKRD28 (ENSPMRG00000020179) #27 BTD (ENSPMRG00000020167) #28 ENSPMRG00000020164 HACL1 (ENSPMRG00000020129) #29 COLQ (ENSPMRG00000020111) #30 PLEKHA8 (ENSPMRG00000020103) FKBP14 (ENSPMRG00000020096) SCRN1 (ENSPMRG00000020090) WIPF3 (ENSPMRG00000020080) ENSPMRG00000020074 CHN2 (ENSPMRG00000017735) tuatara MODERN SPECIES 7 ENSSPUG00000001686 ##19 TBC1D5 (ENSSPUG00000001755) #20 PLCL2 (ENSSPUG00000001790) #21 ENSSPUG00000001799 #22 RFTN1 (ENSSPUG00000001829) #23 OXNAD1 (ENSSPUG00000001833) #24 DPH3 (ENSSPUG00000001843) #25 GALNT15 (ENSSPUG00000001851) #26 ANKRD28 (ENSSPUG00000001937) #27 BTD (ENSSPUG00000002404) #28 ENSSPUG00000002484 #29 ENSSPUG00000002495 #29 COLQ (ENSSPUG00000002500) #30 PLEKHA8 (ENSSPUG00000002533) ENSSPUG00000002554 SCRN1 (ENSSPUG00000002570) WIPF3 (ENSSPUG00000002603) PRR15 (ENSSPUG00000002614) CHN2 (ENSSPUG00000002626) Anura ANCESTRAL SPECIES 12 ENSGT01100000266357 ENSGT00910000144184 #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.D ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a ENSGT00940000159498 ENSGT00940000161975 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000016364 ##13 ENSLLEG00000016259 KAT2B (ENSLLEG00000014888) #14 ENSLLEG00000014797 PP2D1 (ENSLLEG00000014763) #15 ENSLLEG00000014742 RAB5A (ENSLLEG00000014688) #16 ENSLLEG00000014251 KCNH8 (ENSLLEG00000013837) #18 ENSLLEG00000013792 ENSLLEG00000013631 ##19 ENSLLEG00000013583 ENSLLEG00000013533 TBC1D5 (ENSLLEG00000013413) #20 PLCL2 (ENSLLEG00000013245) #21 ENSLLEG00000013104 #22 RFTN1 (ENSLLEG00000013002) #23 ENSLLEG00000012981 OXNAD1 (ENSLLEG00000012884) #24 GALNT15 (ENSLLEG00000012781) #26 ENSLLEG00000012662 ANKRD28 (ENSLLEG00000012335) #27 BTD (ENSLLEG00000012283) #28 ENSLLEG00000012262 HACL1 (ENSLLEG00000011774) #29 COLQ (ENSLLEG00000011444) #30 PLEKHA8 (ENSLLEG00000011242) FKBP14 (ENSLLEG00000011179) SCRN1 (ENSLLEG00000011017) WIPF3 (ENSLLEG00000010864) PRR15 (ENSLLEG00000010846) Leishan spiny toad MODERN SPECIES 5 CDK18 (ENSLLEG00000000794) ENSLLEG00000000783 ENSLLEG00000000774 ENSLLEG00000000732 KLHDC8A (ENSLLEG00000000686) NUAK2 (ENSLLEG00000000659) TMCC2 (ENSLLEG00000000610) DSTYK (ENSLLEG00000000488) ENSLLEG00000000454 ENSLLEG00000000336 PFKFB2 (ENSLLEG00000000114) YOD1 (ENSLLEG00000000057) C1orf116 (ENSLLEG00000013164) ENSLLEG00000012498 ENSLLEG00000012384 ENSLLEG00000012353 #22 ENSLLEG00000012244 IL10 (ENSLLEG00000012047) MAPKAPK2 (ENSLLEG00000011762) DYRK3 (ENSLLEG00000011688) EIF2D (ENSLLEG00000011397) RASSF5 (ENSLLEG00000011355) ENSLLEG00000011335 ENSLLEG00000011313 ENSLLEG00000011285 ENSLLEG00000011258 IKBKE (ENSLLEG00000011050) ENSLLEG00000010377 ENSLLEG00000010309 AVPR1B (ENSLLEG00000010254) ENSLLEG00000009895 Leishan spiny toad MODERN SPECIES 909 ENSLLEG00000018126 #22 ENSLLEG00000017730 ENSLLEG00000017520 Frog MODERN SPECIES il6st (ENSXETG00000015503) ankrd55 (ENSXETG00000015510) ##27 map3k1 (ENSXETG00000015513) setd9 (ENSXETG00000015517) mier3 (ENSXETG00000015520) gpbp1 (ENSXETG00000015527) ENSXETG00000047127 ENSXETG00000045262 smyd5 (ENSXETG00000011764) ENSXETG00000044015 ENSXETG00000048571 ENSXETG00000049463 plk2 (ENSXETG00000018847) ENSXETG00000036149 ENSXETG00000044791 dazl (ENSXETG00000025199) #22 rab3c (ENSXETG00000018853) pde4d (ENSXETG00000018854) ENSXETG00000045835 depdc1b (ENSXETG00000006073) ENSXETG00000026198 elovl7 (ENSXETG00000016688) hps5 (ENSXETG00000016685) ndufaf2 (ENSXETG00000016684) smim15 (ENSXETG00000043765) zswim6 (ENSXETG00000016681) hacd2 (ENSXETG00000014831) dimt1 (ENSXETG00000014830) LRRC70 (ENSXETG00000042543) ipo11 (ENSXETG00000014823) ENSXETG00000047301 Coelacanth MODERN SPECIES 1051 ENSLACG00000002895 #22 ENSLACG00000006795 OXNAD1 (ENSLACG00000008261) #24 ENSLACG00000009282 GALNT15 (ENSLACG00000009544) #26 ANKRD28 (ENSLACG00000012544) #27 Actinopterygii ANCESTRAL SPECIES 2 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000165358 ENSGT00940000165550.a.b ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.C ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 ENSGT00390000009313 ENSGT00940000160808 #26 ENSGT00950000182908.C #27 ENSGT00390000013823.a #28 ENSGT00940000156802 #29 ENSGT00940000157248 #30 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b ENSGT00940000160267 ENSGT00760000119737 ENSGT01030000234635.a.b.a.a Neopterygii ANCESTRAL SPECIES 34 ENSGT00910000144184 #8 ENSGT00940000171014 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000155985 #11 ENSGT00940000160242 #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00390000017863 #15 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000156869 #18 ENSGT00390000008096.C ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b #23 ENSGT00390000004280 #24 Osteoglossocephalai ANCESTRAL SPECIES 37 ENSGT00940000159705 #9 ENSGT00940000165550.a.a ENSGT00940000160242.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00940000154337 #16 ENSGT00530000063528.A.b #17 ENSGT00940000176137 ENSGT00940000156869 #18 ENSGT00390000008096.C ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b #21 ENSGT00940000156439.d ENSGT00530000063609.b.w #23 ENSGT00390000009313 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT01030000234992 ENSGT00390000003271 ENSGT00950000182892.a.b.b Osteoglossiformes ANCESTRAL SPECIES 9 ENSGT00940000156809.b ENSGT00940000155168.a.b #7 ENSGT00940000171014 ENSGT00910000144184 #8 ENSGT00940000159705 #9 ENSGT00940000156415 #10 ENSGT00940000165550.a.a ENSGT00940000160242.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00940000154337.d #16 ENSGT00940000156869 #18 ENSGT00390000008096.C.d ##19 ENSGT00940000157121 #20 ENSGT00940000155660.b.c #21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 Asian bonytongue MODERN SPECIES 15 RARB (ENSSFOG00015014915) thrb (ENSSFOG00015026437) nr1d2b (ENSSFOG00015014807) #7 rpl15 (ENSSFOG00015030914) #8 ENSSFOG00015014798 nkiras1 (ENSSFOG00015014781) #9 ENSSFOG00015014592 ENSSFOG00015014622 ENSSFOG00015014573 ##13 kat2b (ENSSFOG00015014534) #14 RAB5A (ENSSFOG00015029671) #16 KCNH8 (ENSSFOG00015014501) #18 ENSSFOG00015014430 ##19 tbc1d5 (ENSSFOG00015014297) #20 PLCL2 (ENSSFOG00015014254) #21 dazl (ENSSFOG00015014199) #22 ENSSFOG00015014187 #23 ENSSFOG00015032544 #23 oxnad1 (ENSSFOG00015014178) #24 GALNT15 (ENSSFOG00015014164) #26 GPNMB (ENSSFOG00015014141) igf2bp3 (ENSSFOG00015027213) tra2a (ENSSFOG00015014004) ENSSFOG00015014036 ccdc126 (ENSSFOG00015013990) fam221a (ENSSFOG00015013956) npy (ENSSFOG00015013942) ENSSFOG00015013869 GSDME (ENSSFOG00015030956) osbpl3a (ENSSFOG00015013787) ENSSFOG00015013760 P. kingsleyae MODERN SPECIES 95 nr1d2b (ENSPKIG00000009878) #7 ENSPKIG00000009867 rpl15 (ENSPKIG00000009854) #8 nkiras1 (ENSPKIG00000009837) #9 UBE2E1 (ENSPKIG00000009822) #10 ENSPKIG00000009790 ZNF385D (ENSPKIG00000009689) #12 ENSPKIG00000009664 ##13 kat2b (ENSPKIG00000009612) #14 rab5ab (ENSPKIG00000009578) #16 KCNH8 (ENSPKIG00000009502) #18 ENSPKIG00000009394 ##19 ENSPKIG00000009338 tbc1d5 (ENSPKIG00000009255) #20 PLCL2 (ENSPKIG00000009187) #21 ENSPKIG00000009153 #22 Clupeocephala ANCESTRAL SPECIES 190 ENSGT00940000160242.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00940000154337.a.b #16 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 Otomorpha ANCESTRAL SPECIES 172 ENSGT00940000154995 #14 ENSGT00940000154337.b #16 ENSGT00940000168259 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT01030000234992 ENSGT00950000182892.a.a.b.e ENSGT00940000157883.a.b.f ENSGT00390000003271 Clupeiformes ANCESTRAL SPECIES 217 ENSGT00940000154995 #14 ENSGT00940000154337.b #16 ENSGT00940000156869 #18 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315.kc ENSGT00940000159854 ENSGT00950000183025.b.a.ab Denticle herring DUPLICATION Denticle herring MODERN SPECIES 19 nkain1 (ENSDCDG00000027531) pum1 (ENSDCDG00000026845) SDC3 (ENSDCDG00000026799) matn1 (ENSDCDG00000026793) yrk (ENSDCDG00000022794) ENSDCDG00000022721 AHDC1 (ENSDCDG00000022720) wasf2 (ENSDCDG00000022715) gpr3 (ENSDCDG00000022706) ENSDCDG00000022700 ENSDCDG00000022696 kat2b (ENSDCDG00000022584) #14 ENSDCDG00000022563 tbc1d5 (ENSDCDG00000020593) #20 ENSDCDG00000020516 ##21 dazl (ENSDCDG00000020453) #22 oxnad1 (ENSDCDG00000020449) #24 ENSDCDG00000020447 igf2bp3 (ENSDCDG00000020441) ENSDCDG00000020438 ENSDCDG00000020437 cbx3a (ENSDCDG00000020424) ENSDCDG00000020341 #22 oxnad1 (ENSDCDG00000020334) #24 ENSDCDG00000020333 ccdc126 (ENSDCDG00000020327) ENSDCDG00000020324 ENSDCDG00000020266 ENSDCDG00000020249 ENSDCDG00000020247 nfe2l3 (ENSDCDG00000020246) Denticle herring MODERN SPECIES 19 wasf2 (ENSDCDG00000022715) gpr3 (ENSDCDG00000022706) ENSDCDG00000022700 ENSDCDG00000022696 kat2b (ENSDCDG00000022584) #14 ENSDCDG00000022563 tbc1d5 (ENSDCDG00000020593) #20 ENSDCDG00000020516 ##21 dazl (ENSDCDG00000020453) #22 oxnad1 (ENSDCDG00000020449) #24 ENSDCDG00000020447 igf2bp3 (ENSDCDG00000020441) ENSDCDG00000020438 ENSDCDG00000020437 cbx3a (ENSDCDG00000020424) ENSDCDG00000020341 #22 oxnad1 (ENSDCDG00000020334) #24 ENSDCDG00000020333 ccdc126 (ENSDCDG00000020327) ENSDCDG00000020324 ENSDCDG00000020266 ENSDCDG00000020249 ENSDCDG00000020247 nfe2l3 (ENSDCDG00000020246) cbx3a (ENSDCDG00000020241) snx10a (ENSDCDG00000020066) hoxa1a (ENSDCDG00000020061) ENSDCDG00000020059 hoxa1a (ENSDCDG00000020057) ENSDCDG00000020055 evx1 (ENSDCDG00000020054) Atlantic herring MODERN SPECIES 10 ENSCHAG00000014614 ENSCHAG00000014620 ENSCHAG00000014624 dync1li1 (ENSCHAG00000014672) CPNE4 (ENSCHAG00000014978) mrpl3 (ENSCHAG00000015559) ptpn23b (ENSCHAG00000015627) cspg5b (ENSCHAG00000015662) smarcc1b (ENSCHAG00000015712) ENSCHAG00000015832 kat2b (ENSCHAG00000015861) #14 rab5aa (ENSCHAG00000016078) #16 KCNH8 (ENSCHAG00000016128) #18 tbc1d5 (ENSCHAG00000016337) #20 ENSCHAG00000016939 ##21 dazl (ENSCHAG00000016954) #22 ENSCHAG00000016972 oxnad1 (ENSCHAG00000017000) #24 ENSCHAG00000017009 ENSCHAG00000017052 polr1h (ENSCHAG00000017073) ddx39b (ENSCHAG00000017091) mgat1b (ENSCHAG00000017409) gtf2h4 (ENSCHAG00000017497) SH3BP5L (ENSCHAG00000017638) ##33 ENSCHAG00000017687 tnfa (ENSCHAG00000019362) atat1 (ENSCHAG00000019370) ENSCHAG00000019398 bag6l (ENSCHAG00000019410) tk1 (ENSCHAG00000019543) Otophysi ANCESTRAL SPECIES 152 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k Characiphysae ANCESTRAL SPECIES 99 ENSGT00940000154995 #14 ENSGT00940000154337.a.b #16 ENSGT00940000154337.b #16 ENSGT00940000156869 #18 ENSGT00940000157121 #20 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00940000154995 #14 ENSGT00940000154337.a.b #16 ENSGT00940000154337.b #16 ENSGT00940000156869 #18 ENSGT00940000157121 #20 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k Characoidei ANCESTRAL SPECIES 62 ENSGT00940000157121 #20 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k Red-bellied piranha MODERN SPECIES 926 tbc1d5 (ENSPNAG00000012701) #20 dazl (ENSPNAG00000012690) #22 RFTN1 (ENSPNAG00000012657) #23 oxnad1 (ENSPNAG00000012606) #24 Mexicana tetra MODERN SPECIES 49 tbc1d5 (ENSAMXG00000007142) #20 dazl (ENSAMXG00000035291) #22 RFTN1 (ENSAMXG00000007317) #23 oxnad1 (ENSAMXG00000007345) #24 GPNMB (ENSAMXG00000007393) igf2bp3 (ENSAMXG00000007453) ENSAMXG00000036147 tra2a (ENSAMXG00000005553) ccdc126 (ENSAMXG00000039633) fam221a (ENSAMXG00000005524) ENSAMXG00000042268 hoxa1a (ENSAMXG00000005258) ENSAMXG00000043544 HOXA4 (ENSAMXG00000036478) hoxa3a (ENSAMXG00000029041) hoxa5a (ENSAMXG00000037678) ENSAMXG00000005199 Electric eel MODERN SPECIES 808 dazl (ENSEEEG00000008546) #22 ENSEEEG00000008544 #23 oxnad1 (ENSEEEG00000008542) #24 GPNMB (ENSEEEG00000008540) igf2bp3 (ENSEEEG00000008395) tra2a (ENSEEEG00000008388) ccdc126 (ENSEEEG00000008387) fam221a (ENSEEEG00000008384) npy (ENSEEEG00000008383) ENSEEEG00000008264 ENSEEEG00000008246 Channel catfish MODERN SPECIES 3 ubap2l (ENSIPUG00000007128) ENSIPUG00000007044 PBXIP1 (ENSIPUG00000006990) s100a11 (ENSIPUG00000006945) ENSIPUG00000006924 s100s (ENSIPUG00000006911) pygo2 (ENSIPUG00000006900) cgnb (ENSIPUG00000006734) nudc (ENSIPUG00000006691) tbxta (ENSIPUG00000006660) ARID1A (ENSIPUG00000006578) kat2b (ENSIPUG00000006521) #14 ENSIPUG00000006495 ENSIPUG00000006482 #18 tbc1d5 (ENSIPUG00000006394) #20 dazl (ENSIPUG00000006376) #22 ENSIPUG00000006330 ENSIPUG00000006286 osbpl3a (ENSIPUG00000006191) npy (ENSIPUG00000006156) ccdc126 (ENSIPUG00000006135) igf2bp3 (ENSIPUG00000006070) oxnad1 (ENSIPUG00000005994) #24 ENSIPUG00000005966 chd4 (ENSIPUG00000005694) Cdc42 (ENSIPUG00000005587) ENO2 (ENSIPUG00000005498) daxx (ENSIPUG00000005459) rxrba (ENSIPUG00000005324) col11a2 (ENSIPUG00000005088) sdha (ENSIPUG00000005032) Cyprinoidei ANCESTRAL SPECIES 33 ENSGT00940000157071 ENSGT00940000159356.a.b.b ENSGT01050000244841.A.b.a.b.a.a.i ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00390000010779.a.b.a ENSGT00530000063631.a.k ENSGT00390000006540 ENSGT00940000154995 #14 ENSGT00940000154337.b #16 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 75 ENSGT00940000161408.b ENSGT00950000183051.a.a.a.b ENSGT00940000156500.f ENSGT00390000010779.a.b.a.e ENSGT00530000063631.a.k.a ENSGT00510000047030.d.q.a ENSGT00390000006540.e ENSGT00940000154995.gb #14 ENSGT00940000154337.b.e.a #16 ENSGT00940000156869.j #18 ENSGT00390000008096.C.b.b ##19 ENSGT00940000157121.h #20 ENSGT00530000063480.b.o #22 ENSGT00530000063609.b.x.r #23 ENSGT00530000063609.b.x.q.b #23 ENSGT00390000004280.b #24 ENSGT00950000183188.B.i ENSGT00940000154957.B.b ENSGT00940000157167.ab ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B.h ENSGT00770000120611.B.g ENSGT00940000156475.f.c ENSGT00940000155348.A.i ENSGT00940000155880.f.f ENSGT00940000155957.b.c ENSGT00940000157883.a.b.f.d ENSGT00390000003271.d Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 2649 satb1a (ENSCARG00000062427) ##19 tbc1d5 (ENSCARG00000062569) #20 dazl (ENSCARG00000064923) #22 Goldfish MODERN SPECIES 1178 dazl (ENSCARG00000025828) #22 RFTN1 (ENSCARG00000025808) #23 oxnad1 (ENSCARG00000025794) #24 Goldfish MODERN SPECIES 38 med30 (ENSCARG00000021936) ext1b (ENSCARG00000021952) ENSCARG00000022000 znf516 (ENSCARG00000022006) tshz1 (ENSCARG00000022016) cndp2 (ENSCARG00000022040) txnl4a (ENSCARG00000022496) adnp2b (ENSCARG00000022506) nutf2l (ENSCARG00000022510) ngly1 (ENSCARG00000022519) kat2b (ENSCARG00000022552) #14 rab5aa (ENSCARG00000022987) #16 KCNH8 (ENSCARG00000022999) #18 satb1a (ENSCARG00000023032) ##19 tbc1d5 (ENSCARG00000023076) #20 dazl (ENSCARG00000024917) #22 ENSCARG00000024956 #23 oxnad1 (ENSCARG00000024962) #24 GPNMB (ENSCARG00000025004) igf2bp3 (ENSCARG00000025298) tra2a (ENSCARG00000030410) ccdc126 (ENSCARG00000030423) ENSCARG00000030433 npy (ENSCARG00000030446) ENSCARG00000030534 ENSCARG00000032016 osbpl3a (ENSCARG00000032064) ENSCARG00000032558 ENSCARG00000032573 TRIL (ENSCARG00000032590) CREB5 (ENSCARG00000032602) Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00940000159356.a.b.b.a ENSGT01050000244841.A.b.a.b.a.a.i.b ENSGT00390000014772.k.f ENSGT00940000161408.b ENSGT00950000183051.a.a.a.b ENSGT00940000156500.f ENSGT00390000010779.a.b.a.e ENSGT00530000063631.a.k.a ENSGT00510000047030.d.q.a ENSGT00390000006540.e ENSGT00940000154995.gb #14 ENSGT00940000154337.b.e.a #16 ENSGT00940000156869.j #18 ENSGT00390000008096.C.b.b ##19 ENSGT00940000157121.h #20 ENSGT00530000063480.b.o #22 ENSGT00530000063609.b.x.r #23 ENSGT00530000063609.b.x.q.b #23 ENSGT00390000004280.b #24 ENSGT00950000183188.B.i ENSGT00940000154957.B.b ENSGT00940000157167.ab ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B.h ENSGT00770000120611.B.g ENSGT00940000156475.f.c ENSGT00940000155348.A.i ENSGT00940000155880.f.f ENSGT00940000155957.b.c ENSGT00940000157883.a.b.f.d ENSGT00390000003271.d Common carp reference MODERN SPECIES 31 ENSCCRG00000076353 znf516 (ENSCCRG00000060631) ENSCCRG00000067793 tshz1 (ENSCCRG00000078395) ENSCCRG00000068758 cndp2 (ENSCCRG00000021131) txnl4a (ENSCCRG00000020409) adnp2b (ENSCCRG00000020419) nutf2l (ENSCCRG00000020425) ngly1 (ENSCCRG00000020431) kat2b (ENSCCRG00000007857) #14 rab5aa (ENSCCRG00000054440) #16 KCNH8 (ENSCCRG00000041034) #18 satb1a (ENSCCRG00000041031) ##19 tbc1d5 (ENSCCRG00000032372) #20 dazl (ENSCCRG00000064421) #22 ENSCCRG00000023882 #23 ENSCCRG00000032267 #23 oxnad1 (ENSCCRG00000032264) #24 GPNMB (ENSCCRG00000041852) igf2bp3 (ENSCCRG00000054552) tra2a (ENSCCRG00000030052) ccdc126 (ENSCCRG00000073389) fam221a (ENSCCRG00000057810) npy (ENSCCRG00000013855) ENSCCRG00000026632 ENSCCRG00000082773 osbpl3a (ENSCCRG00000037850) npvf (ENSCCRG00000066501) nfe2l3 (ENSCCRG00000082240) CBX3 (ENSCCRG00000019533) Golden-line barbel MODERN SPECIES 173 PCDH1 (ENSSGRG00000047544) tshz1 (ENSSGRG00000047545) cndp2 (ENSSGRG00000047548) ENSSGRG00000047633 adnp2b (ENSSGRG00000047638) nutf2l (ENSSGRG00000047639) ngly1 (ENSSGRG00000047655) kat2b (ENSSGRG00000047666) #14 KCNH8 (ENSSGRG00000047985) #18 satb1a (ENSSGRG00000047993) ##19 tbc1d5 (ENSSGRG00000048006) #20 dazl (ENSSGRG00000048694) #22 oxnad1 (ENSSGRG00000048695) #24 GPNMB (ENSSGRG00000048697) igf2bp3 (ENSSGRG00000048700) tra2a (ENSSGRG00000048846) ccdc126 (ENSSGRG00000048847) fam221a (ENSSGRG00000048849) ENSSGRG00000048852 ENSSGRG00000049022 Cyprininae ANCESTRAL SPECIES 115 ENSGT00390000014772.k.e ENSGT00940000161408.a ENSGT00950000183051.a.a.a.a ENSGT00940000156500.e ENSGT00390000010779.a.b.a.f ENSGT00530000063631.a.k.b ENSGT00510000047030.d.q.b ENSGT00390000006540.f ENSGT00940000154995.fb #14 ENSGT00940000154337.b.f #16 ENSGT00940000168259 ENSGT00390000008096.C.a.b ##19 ENSGT00940000156869.i #18 ENSGT00390000008096.C.b.a ##19 ENSGT00940000157121.g #20 ENSGT00530000063480.b.p #22 ENSGT00530000063609.b.x.q.a #23 ENSGT00390000004280.a #24 ENSGT00950000183188.B.j ENSGT00940000154957.B.a ENSGT00940000157167.`b Goldfish MODERN SPECIES 10 ENSCARG00000018113 ENSCARG00000023108 znf516 (ENSCARG00000023096) tshz1 (ENSCARG00000023087) cndp2 (ENSCARG00000022692) txnl4a (ENSCARG00000022641) adnp2b (ENSCARG00000022636) nutf2l (ENSCARG00000022627) ENSCARG00000022623 ngly1 (ENSCARG00000022617) kat2b (ENSCARG00000020707) #14 rab5aa (ENSCARG00000020626) #16 KCNH8 (ENSCARG00000020573) #18 satb1a (ENSCARG00000020567) ##19 tbc1d5 (ENSCARG00000020443) #20 dazl (ENSCARG00000020409) #22 ENSCARG00000020405 #23 oxnad1 (ENSCARG00000020398) #24 GPNMB (ENSCARG00000020368) igf2bp3 (ENSCARG00000019683) tra2a (ENSCARG00000019610) fam221a (ENSCARG00000019601) npy (ENSCARG00000019590) ENSCARG00000019221 ENSCARG00000019190 osbpl3a (ENSCARG00000019140) npvf (ENSCARG00000019116) nfe2l3 (ENSCARG00000019112) cbx3a (ENSCARG00000019073) snx10a (ENSCARG00000019061) hoxa1a (ENSCARG00000019054) Cyprininae_a ANCESTRAL SPECIES 52 ENSGT00390000014772.k.e ENSGT00940000161408.a ENSGT00950000183051.a.a.a.a ENSGT00940000156500.e ENSGT00390000010779.a.b.a.f ENSGT00530000063631.a.k.b ENSGT00510000047030.d.q.b ENSGT00390000006540.f ENSGT00940000154995.fb #14 ENSGT00940000154337.b.f #16 ENSGT00940000168259 ENSGT00390000008096.C.a.b ##19 ENSGT00940000156869.i #18 ENSGT00390000008096.C.b.a ##19 ENSGT00940000157121.g #20 ENSGT00530000063480.b.p #22 ENSGT00530000063609.b.x.q.a #23 ENSGT00390000004280.a #24 ENSGT00950000183188.B.j ENSGT00940000154957.B.a ENSGT00940000157167.`b Common carp reference MODERN SPECIES 12 sall3b (ENSCCRG00000079531) GALR1 (ENSCCRG00000069851) ENSCCRG00000058472 znf516 (ENSCCRG00000026041) tshz1 (ENSCCRG00000055930) ENSCCRG00000043638 cndp2 (ENSCCRG00000020392) txnl4a (ENSCCRG00000021097) adnp2b (ENSCCRG00000021092) ngly1 (ENSCCRG00000021036) kat2b (ENSCCRG00000069798) #14 ENSCCRG00000077868 #16 KCNH8 (ENSCCRG00000023886) #18 satb1a (ENSCCRG00000024007) ##19 tbc1d5 (ENSCCRG00000023940) #20 dazl (ENSCCRG00000023883) #22 RFTN1 (ENSCCRG00000023881) #23 oxnad1 (ENSCCRG00000023876) #24 GPNMB (ENSCCRG00000023873) igf2bp3 (ENSCCRG00000030227) tra2a (ENSCCRG00000062498) fam221a (ENSCCRG00000037999) ENSCCRG00000038004 ENSCCRG00000038010 OSBPL3 (ENSCCRG00000010797) ENSCCRG00000037612 npvf (ENSCCRG00000074653) nfe2l3 (ENSCCRG00000071197) CBX3 (ENSCCRG00000080967) snx10a (ENSCCRG00000063489) hoxa1a (ENSCCRG00000019567) Golden-line barbel MODERN SPECIES 148 nfatc1 (ENSSGRG00000052172) atp9b (ENSSGRG00000051577) sall3b (ENSSGRG00000051568) GALR1 (ENSSGRG00000051567) ENSSGRG00000051562 znf516 (ENSSGRG00000051559) tshz1 (ENSSGRG00000051558) cndp2 (ENSSGRG00000051541) txnl4a (ENSSGRG00000051535) adnp2b (ENSSGRG00000051534) nutf2l (ENSSGRG00000051532) kat2b (ENSSGRG00000051507) #14 KCNH8 (ENSSGRG00000051506) #18 satb1a (ENSSGRG00000051505) ##19 tbc1d5 (ENSSGRG00000051406) #20 dazl (ENSSGRG00000051384) #22 ENSSGRG00000051383 #23 oxnad1 (ENSSGRG00000051382) #24 GPNMB (ENSSGRG00000051381) ENSSGRG00000051380 igf2bp3 (ENSSGRG00000050552) tra2a (ENSSGRG00000050536) fam221a (ENSSGRG00000050535) ccdc126 (ENSSGRG00000050534) npy (ENSSGRG00000050533) ENSSGRG00000050477 GSDME (ENSSGRG00000050472) osbpl3a (ENSSGRG00000050470) nfe2l3 (ENSSGRG00000050469) cbx3a (ENSSGRG00000050459) snx10a (ENSSGRG00000050456) Zebrafish MODERN SPECIES 10 GALR1 (ENSDARG00000005522) ENSDARG00000111408 ENSDARG00000036186 znf516 (ENSDARG00000070809) tshz1 (ENSDARG00000005026) cndp2 (ENSDARG00000003931) txnl4a (ENSDARG00000036190) adnp2b (ENSDARG00000028431) nutf2l (ENSDARG00000014499) ngly1 (ENSDARG00000003205) kat2b (ENSDARG00000062634) #14 rab5aa (ENSDARG00000018602) #16 KCNH8 (ENSDARG00000062640) #18 satb1a (ENSDARG00000057649) ##19 tbc1d5 (ENSDARG00000036212) #20 dazl (ENSDARG00000036214) #22 RFTN1 (ENSDARG00000070831) #23 oxnad1 (ENSDARG00000062664) #24 GPNMB (ENSDARG00000062688) igf2bp3 (ENSDARG00000010266) ENSDARG00000096834 tra2a (ENSDARG00000007863) ccdc126 (ENSDARG00000062695) fam221a (ENSDARG00000027599) ENSDARG00000074359 npy (ENSDARG00000036222) pals2b (ENSDARG00000029761) ENSDARG00000086762 osbpl3a (ENSDARG00000033251) ENSDARG00000095636 npvf (ENSDARG00000036227) Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00940000154337.a.b #16 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00940000161975 ENSGT00940000156420.a.b ENSGT00390000003635.g Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995 #14 ENSGT00940000154337.a.b #16 ENSGT00940000154337.b #16 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f ENSGT00940000155957.b ENSGT00940000161975 ENSGT00940000156420.a.b.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 48 ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995.eb #14 ENSGT00940000154337.a.b.a #16 ENSGT00940000156869.e.a #18 ENSGT00390000008096.C.b.d.b ##19 ENSGT00940000157121.k #20 ENSGT00940000155660.a.a.b ##21 ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q #22 ENSGT00530000063609.b.x.c.a #23 ENSGT00390000004280.h.b #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00940000160808 #26 ENSGT00950000183188.B.o ENSGT00940000154957.B.g ENSGT00940000157167.db ENSGT00940000153470.a.a.a.b.b ENSGT00770000120611.B ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a ENSGT00940000155957.b.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b Huchen MODERN SPECIES 1881 satb1a (ENSHHUG00000020877) ##19 tbc1d5 (ENSHHUG00000020544) #20 ENSHHUG00000020529 ##21 ENSHHUG00000020524 ENSHHUG00000020520 dazl (ENSHHUG00000020510) #22 Salmoninae_a ANCESTRAL SPECIES 28 ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995.eb #14 ENSGT00940000154337.a.b.a #16 ENSGT00940000156869.e.a #18 ENSGT00390000008096.C.b.d.b ##19 ENSGT00940000157121.k #20 ENSGT00940000155660.a.b ##21 ENSGT01070000254813 ENSGT00940000155660.a.a.b ##21 ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q #22 ENSGT00530000063609.b.x.c.a #23 ENSGT00390000004280.h.b #24 ENSGT00940000160808 #26 ENSGT00950000183188.B.o ENSGT00940000154957.B.g ENSGT00940000157167.db ENSGT00940000153470.a.a.a.b.b ENSGT00770000120611.B ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a ENSGT00940000155957.b.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b ENSGT00390000003635.g.c.a Salmo ANCESTRAL SPECIES 2 ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995.eb #14 ENSGT00940000154337.a.b.a #16 ENSGT00940000156869.e.a #18 ENSGT00390000008096.C.b.d.b ##19 ENSGT00940000157121.k #20 ENSGT01070000254813 ENSGT00940000155660.a.a.b ##21 ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q #22 ENSGT00530000063609.b.x.c.a #23 ENSGT00390000004280.h.b #24 ENSGT00940000160808 #26 ENSGT00950000183188.B.o ENSGT00940000154957.B.g ENSGT00940000157167.db ENSGT00940000153470.a.a.a.b.b ENSGT00770000120611.B ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a ENSGT00940000155957.b.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b ENSGT00390000003635.g.c.a River trout MODERN SPECIES 27 ENSSTUG00000021571 TINAGL1 (ENSSTUG00000021559) lim2.5 (ENSSTUG00000021536) ENSSTUG00000021476 rab25a (ENSSTUG00000021456) ENSSTUG00000021448 #12 ENSSTUG00000021441 ##13 kat2b (ENSSTUG00000021073) #14 RAB5A (ENSSTUG00000021044) #16 satb1a (ENSSTUG00000021041) ##19 tbc1d5 (ENSSTUG00000020110) #20 ENSSTUG00000020040 ENSSTUG00000019945 ##21 ENSSTUG00000019930 ENSSTUG00000019925 dazl (ENSSTUG00000019898) #22 ENSSTUG00000019879 #23 oxnad1 (ENSSTUG00000019867) #24 GALNT15 (ENSSTUG00000019842) #26 GPNMB (ENSSTUG00000019830) igf2bp3 (ENSSTUG00000019758) tra2a (ENSSTUG00000019736) ccdc126 (ENSSTUG00000019727) fam221a (ENSSTUG00000019703) npy (ENSSTUG00000019686) ENSSTUG00000019651 GSDME (ENSSTUG00000019636) osbpl3a (ENSSTUG00000019417) ENSSTUG00000019376 TRIL (ENSSTUG00000019352) CREB5 (ENSSTUG00000019318) Atlantic salmon MODERN SPECIES 19 ENSSSAG00000046830 ENSSSAG00000068152 ubql4 (ENSSSAG00000046723) ENSSSAG00000046697 ENSSSAG00000046690 #12 ENSSSAG00000046678 ##13 kat2b (ENSSSAG00000046492) #14 RAB5A (ENSSSAG00000110045) #16 ENSSSAG00000045793 #18 satb1a (ENSSSAG00000114957) ##19 ENSSSAG00000088469 tbc1d5 (ENSSSAG00000040193) #20 ENSSSAG00000040073 ENSSSAG00000096809 ENSSSAG00000088140 dazl (ENSSSAG00000116219) #22 ENSSSAG00000039761 #23 ENSSSAG00000118045 oxnad1 (ENSSSAG00000039654) #24 ENSSSAG00000039484 GALNT15 (ENSSSAG00000039629) #26 igf2bp3 (ENSSSAG00000016115) tra2a (ENSSSAG00000015847) ENSSSAG00000108185 ccdc126 (ENSSSAG00000015834) ENSSSAG00000108649 ENSSSAG00000121146 fam221a (ENSSSAG00000114309) npy (ENSSSAG00000084788) ENSSSAG00000118492 ENSSSAG00000114219 Oncorhynchus ANCESTRAL SPECIES 29 ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b #12 ENSGT00940000154107.b ##13 ENSGT00940000154995.eb #14 ENSGT00940000154337.a.b.a #16 ENSGT00940000156869.f #18 ENSGT00390000008096.C.b.d.b ##19 ENSGT00940000157121.k #20 ENSGT00940000155660.a.b ##21 ENSGT01070000254813 ENSGT00940000155660.a.a.b ##21 ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q #22 ENSGT00530000063609.b.x.c.a #23 ENSGT00390000004280.h.b #24 ENSGT00940000160808 #26 ENSGT00950000183188.B.o ENSGT00940000154957.B.g ENSGT00940000157167.db ENSGT00940000153470.a.a.a.b.b ENSGT00770000120611.B ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a ENSGT00940000155957.b.b ENSGT00940000156906.j.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b.a #12 ENSGT00940000154107.b ##13 ENSGT00940000154995.eb #14 ENSGT00940000154337.a.b.a #16 ENSGT00940000156869.f #18 ENSGT00390000008096.C.b.d.b ##19 ENSGT00940000157121.k #20 ENSGT00940000155660.a.a.b ##21 ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q #22 ENSGT00530000063609.b.x.c.a #23 ENSGT00390000004280.h.b #24 ENSGT00940000160808 #26 ENSGT00950000183188.B.o ENSGT00940000154957.B.g ENSGT00940000157167.db ENSGT00940000153470.a.a.a.b.b ENSGT00770000120611.B ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a ENSGT00940000155957.b.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b ENSGT00390000003635.g.c.a Coho salmon MODERN SPECIES 8 KCNQ4 (ENSOKIG00005038726) TINAGL1 (ENSOKIG00005039028) LIM2 (ENSOKIG00005039195) ENSOKIG00005039251 rab25a (ENSOKIG00005039359) ENSOKIG00005039394 #12 ENSOKIG00005039403 ##13 kat2b (ENSOKIG00005039493) #14 RAB5A (ENSOKIG00005040055) #16 ENSOKIG00005040112 #18 satb1a (ENSOKIG00005040510) ##19 tbc1d5 (ENSOKIG00005040670) #20 ENSOKIG00005043665 ##21 ENSOKIG00005043740 ENSOKIG00005043747 dazl (ENSOKIG00005043763) #22 ENSOKIG00005043784 #23 ENSOKIG00005043793 ENSOKIG00005043803 oxnad1 (ENSOKIG00005043810) #24 GALNT15 (ENSOKIG00005043842) #26 ENSOKIG00005043853 GPNMB (ENSOKIG00005043861) ENSOKIG00005043877 igf2bp3 (ENSOKIG00005043935) tra2a (ENSOKIG00005044533) fam221a (ENSOKIG00005044564) osbpl3a (ENSOKIG00005044641) npy (ENSOKIG00005045569) ENSOKIG00005045592 ENSOKIG00005045644 Chinook salmon MODERN SPECIES 4 TINAGL1 (ENSOTSG00005006145) lim2.5 (ENSOTSG00005006155) ENSOTSG00005006156 rab25a (ENSOTSG00005006201) ENSOTSG00005006202 #12 ENSOTSG00005006203 #12 ENSOTSG00005006204 ##13 kat2b (ENSOTSG00005006214) #14 RAB5A (ENSOTSG00005009191) #16 ENSOTSG00005009192 #18 ENSOTSG00005009193 ##19 tbc1d5 (ENSOTSG00005009194) #20 ENSOTSG00005009926 ##21 ENSOTSG00005009927 ##21 ENSOTSG00005009929 dazl (ENSOTSG00005009930) #22 ENSOTSG00005009932 #23 oxnad1 (ENSOTSG00005009933) #24 GALNT15 (ENSOTSG00005009935) #26 GPNMB (ENSOTSG00005009936) igf2bp3 (ENSOTSG00005009941) tra2a (ENSOTSG00005010612) ccdc126 (ENSOTSG00005010613) fam221a (ENSOTSG00005010614) npy (ENSOTSG00005010616) ENSOTSG00005001614 ENSOTSG00005001731 ENSOTSG00005001733 osbpl3a (ENSOTSG00005001739) TRIL (ENSOTSG00005001743) CREB5 (ENSOTSG00005001744) Rainbow trout MODERN SPECIES 9 ENSOMYG00000015161 ENSOMYG00000075706 ENSOMYG00000077447 ENSOMYG00000015152 #12 ENSOMYG00000015144 ##13 kat2b (ENSOMYG00000014314) #14 RAB5A (ENSOMYG00000014195) #16 KCNH8 (ENSOMYG00000014041) #18 satb1a (ENSOMYG00000013702) ##19 tbc1d5 (ENSOMYG00000013579) #20 ENSOMYG00000058228 ENSOMYG00000013394 ##21 ENSOMYG00000073485 ENSOMYG00000013302 ENSOMYG00000013288 dazl (ENSOMYG00000013266) #22 ENSOMYG00000013236 ENSOMYG00000013222 #23 oxnad1 (ENSOMYG00000013204) #24 GALNT15 (ENSOMYG00000013197) #26 GPNMB (ENSOMYG00000013187) igf2bp3 (ENSOMYG00000013089) tra2a (ENSOMYG00000013042) ccdc126 (ENSOMYG00000013038) fam221a (ENSOMYG00000013027) npy (ENSOMYG00000013012) ENSOMYG00000012952 ENSOMYG00000012920 TRIL (ENSOMYG00000012751) CREB5 (ENSOMYG00000012745) jazf1a (ENSOMYG00000012732) Salmoninae ANCESTRAL SPECIES 136 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000165648 ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b ENSGT00940000158230.b.b.d ENSGT00940000160242.b.a #12 ENSGT00940000154995.db #14 ENSGT00940000154337.a.b.b #16 ENSGT00940000156869.e.b #18 ENSGT00390000008096.C.b.d.a ##19 ENSGT00940000157121.l #20 ENSGT00940000155660.a.a.a ##21 ENSGT00530000063480.b.r #22 ENSGT00530000063609.b.x.c.b #23 ENSGT00390000004280.h.a #24 ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b ENSGT00940000155957.b.a ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a ENSGT00390000003635.g.c.b ENSGT00950000183025.b.a.ab.d ENSGT00940000165581.c.a Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b ENSGT00940000158230.b.b.d ENSGT00940000160242.b.a #12 ENSGT00940000154995.db #14 ENSGT00940000154337.a.b.b #16 ENSGT00940000156869.e.b #18 ENSGT00390000008096.C.b.d.a ##19 ENSGT00940000157121.l #20 ENSGT00940000155660.a.a.a ##21 ENSGT00530000063480.b.r #22 ENSGT00530000063609.b.x.c.b #23 ENSGT00390000004280.h.a #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b ENSGT00940000155957.b.a ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a ENSGT00390000003635.g.c.b ENSGT00950000183025.b.a.ab.d Salmo ANCESTRAL SPECIES 2 ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b ENSGT00940000158230.b.b.d ENSGT00940000160242.b.a #12 ENSGT00940000154995.db #14 ENSGT00940000154337.a.b.b #16 ENSGT00940000156869.e.b #18 ENSGT00390000008096.C.b.d.a ##19 ENSGT00940000157121.l #20 ENSGT00940000155660.a.a.a ##21 ENSGT00530000063480.b.r #22 ENSGT00530000063609.b.x.c.b #23 ENSGT00390000004280.h.a #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a ENSGT00940000156475.f.a ENSGT00940000158500.r ENSGT00940000155348.A.e ENSGT00940000155880.f.b ENSGT00940000155957.b.a ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a ENSGT00390000003635.g.c.b River trout MODERN SPECIES 29 grinaa (ENSSTUG00000040092) ENSSTUG00000040085 RPRD1A (ENSSTUG00000040062) nfyc (ENSSTUG00000039513) KCNQ4 (ENSSTUG00000039438) TINAGL1 (ENSSTUG00000039412) lim2.5 (ENSSTUG00000039396) ENSSTUG00000039222 ENSSTUG00000039177 ZNF385D (ENSSTUG00000039168) #12 kat2b (ENSSTUG00000037743) #14 RAB5A (ENSSTUG00000037684) #16 ENSSTUG00000037654 #18 ENSSTUG00000037645 ##19 ENSSTUG00000046943 ##21 dazl (ENSSTUG00000046935) #22 ENSSTUG00000046928 ENSSTUG00000046914 #23 oxnad1 (ENSSTUG00000046911) #24 ENSSTUG00000046901 ENSSTUG00000046899 GPNMB (ENSSTUG00000046895) igf2bp3 (ENSSTUG00000046853) tra2a (ENSSTUG00000046838) ccdc126 (ENSSTUG00000046833) npy (ENSSTUG00000046812) pals2b (ENSSTUG00000046798) ENSSTUG00000046790 GSDME (ENSSTUG00000046784) osbpl3a (ENSSTUG00000046765) TRIL (ENSSTUG00000046754) Atlantic salmon MODERN SPECIES 5 ENSSSAG00000098149 UBQL4 (ENSSSAG00000058719) ENSSSAG00000099987 ENSSSAG00000058816 #12 ENSSSAG00000103521 ENSSSAG00000058826 ENSSSAG00000058839 ENSSSAG00000113896 ENSSSAG00000087966 kat2b (ENSSSAG00000111735) #14 ENSSSAG00000024200 #16 ENSSSAG00000064758 #18 satb1a (ENSSSAG00000046228) ##19 tbc1d5 (ENSSSAG00000042278) #20 ENSSSAG00000041431 ##21 dazl (ENSSSAG00000091289) #22 ENSSSAG00000041364 #23 ENSSSAG00000041372 oxnad1 (ENSSSAG00000102742) #24 ENSSSAG00000104441 ENSSSAG00000015900 ENSSSAG00000041346 gpnmb (ENSSSAG00000041327) igf2bp3 (ENSSSAG00000040628) tra2a (ENSSSAG00000040587) ccdc126 (ENSSSAG00000104586) npy (ENSSSAG00000040508) ENSSSAG00000009104 ENSSSAG00000040473 GSDME (ENSSSAG00000067817) osbpl3a (ENSSSAG00000065307) Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b ENSGT00940000158230.b.b.d ENSGT00940000160242.b.a #12 ENSGT00940000154995.db #14 ENSGT00940000154337.a.b.b #16 ENSGT00940000156869.e.b #18 ENSGT00390000008096.C.b.d.a ##19 ENSGT00940000157121.l #20 ENSGT00940000155660.a.a.a ##21 ENSGT00530000063480.b.r #22 ENSGT00530000063609.b.x.c.b #23 ENSGT00390000004280.h.a #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b ENSGT00940000155957.b.a ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a ENSGT00390000003635.g.c.b ENSGT00950000183025.b.a.ab.d Rainbow trout MODERN SPECIES 24 ENSOMYG00000064546 ENSOMYG00000048335 ENSOMYG00000010733 ENSOMYG00000075414 ENSOMYG00000010619 ENSOMYG00000010583 ENSOMYG00000010556 ZNF385D (ENSOMYG00000062776) #12 kat2b (ENSOMYG00000008707) #14 RAB5A (ENSOMYG00000007766) #16 KCNH8 (ENSOMYG00000011479) #18 satb1a (ENSOMYG00000011451) ##19 tbc1d5 (ENSOMYG00000009058) #20 ENSOMYG00000073762 ##21 ENSOMYG00000050278 dazl (ENSOMYG00000007820) #22 ENSOMYG00000069497 ENSOMYG00000051561 #23 ENSOMYG00000007692 #23 oxnad1 (ENSOMYG00000007661) #24 ENSOMYG00000007638 GPNMB (ENSOMYG00000007629) igf2bp3 (ENSOMYG00000007245) ENSOMYG00000064440 tra2a (ENSOMYG00000006730) ENSOMYG00000006622 npy (ENSOMYG00000006572) ENSOMYG00000052239 ENSOMYG00000006497 GSDME (ENSOMYG00000006469) ENSOMYG00000049320 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b ENSGT00940000158230.b.b.d ENSGT00940000160242.b.a #12 ENSGT00940000154995.db #14 ENSGT00940000154337.a.b.b #16 ENSGT00940000156869.e.b #18 ENSGT00390000008096.C.b.d.a ##19 ENSGT00940000157121.l #20 ENSGT00940000155660.a.a.a ##21 ENSGT00530000063480.b.r #22 ENSGT00530000063609.b.x.c.b #23 ENSGT00390000004280.h.a #24 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a ENSGT00990000210143 ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b ENSGT00940000155957.b.a ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a ENSGT00390000003635.g.c.b Chinook salmon MODERN SPECIES 242 tbc1d5 (ENSOTSG00005039890) #20 ENSOTSG00005039879 ##21 ENSOTSG00005039878 ##21 dazl (ENSOTSG00005039875) #22 Coho salmon MODERN SPECIES 5 ENSOKIG00005022278 RPRD1A (ENSOKIG00005022285) nfyc (ENSOKIG00005022336) KCNQ4 (ENSOKIG00005004317) TINAGL1 (ENSOKIG00005004449) LIM2 (ENSOKIG00005004500) ENSOKIG00005004546 RAB25 (ENSOKIG00005004604) ZNF385D (ENSOKIG00005004621) #12 kat2b (ENSOKIG00005004681) #14 RAB5A (ENSOKIG00005004989) #16 KCNH8 (ENSOKIG00005005011) #18 satb1a (ENSOKIG00005005220) ##19 tbc1d5 (ENSOKIG00005005258) #20 ENSOKIG00005005414 ##21 dazl (ENSOKIG00005005469) #22 ENSOKIG00005005493 #23 ENSOKIG00005005510 oxnad1 (ENSOKIG00005005528) #24 ENSOKIG00005005602 ENSOKIG00005005608 GPNMB (ENSOKIG00005005613) igf2bp3 (ENSOKIG00005005671) tra2a (ENSOKIG00005006466) ccdc126 (ENSOKIG00005006477) ENSOKIG00005006496 npy (ENSOKIG00005006512) ENSOKIG00005006623 GSDME (ENSOKIG00005008643) osbpl3a (ENSOKIG00005008676) TRIL (ENSOKIG00005008967) Huchen MODERN SPECIES 722 ENSHHUG00000005691 TINAGL1 (ENSHHUG00000005693) lim2.5 (ENSHHUG00000005748) ENSHHUG00000005752 ENSHHUG00000005831 rab25a (ENSHHUG00000005835) ENSHHUG00000005846 #12 ENSHHUG00000005857 ##13 kat2b (ENSHHUG00000005870) #14 RAB5A (ENSHHUG00000005906) #16 KCNH8 (ENSHHUG00000005969) #18 satb1a (ENSHHUG00000005987) ##19 tbc1d5 (ENSHHUG00000006169) #20 ENSHHUG00000006576 ENSHHUG00000006587 ##21 dazl (ENSHHUG00000006799) #22 ENSHHUG00000006814 Northern pike MODERN SPECIES 9 ENSELUG00000006829 nfyc (ENSELUG00000006791) KCNQ4 (ENSELUG00000006759) TINAGL1 (ENSELUG00000006679) lim2.5 (ENSELUG00000006656) UBQLN4 (ENSELUG00000006629) rab25a (ENSELUG00000006604) ZNF385D (ENSELUG00000006590) #12 ENSELUG00000006565 ##13 kat2b (ENSELUG00000006508) #14 RAB5A (ENSELUG00000006462) #16 KCNH8 (ENSELUG00000006418) #18 satb1a (ENSELUG00000006344) ##19 tbc1d5 (ENSELUG00000006305) #20 ENSELUG00000006244 ##21 dazl (ENSELUG00000006175) #22 ENSELUG00000006125 #23 oxnad1 (ENSELUG00000029103) #24 ENSELUG00000006058 GALNT15 (ENSELUG00000006025) #26 GPNMB (ENSELUG00000005995) igf2bp3 (ENSELUG00000005947) ENSELUG00000032172 tra2a (ENSELUG00000005846) ccdc126 (ENSELUG00000005811) fam221a (ENSELUG00000005782) ENSELUG00000031716 npy (ENSELUG00000005748) ENSELUG00000001355 GSDME (ENSELUG00000001264) osbpl3a (ENSELUG00000000150) Acanthomorphata ANCESTRAL SPECIES 49 ENSGT00940000155029.c.a.f ENSGT00940000157315 ENSGT00940000156007.k ENSGT00940000153305 ENSGT00950000182892.a.b.b ENSGT00390000003271 ENSGT01030000234992 ENSGT00940000157248.c.b #30 ENSGT00940000157858.j ENSGT00940000160267 ENSGT00760000119737 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 ENSGT00940000157683 ENSGT00940000162732 ENSGT00940000159344 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000156007.k ENSGT00940000153305 ENSGT00950000182892.a.b.b ENSGT00390000003271 ENSGT01030000234992 ENSGT00940000157248.c.b #30 ENSGT00940000157858.j ENSGT00940000160267 ENSGT00760000119737 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00940000160808 #26 ENSGT00950000183188.B ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00770000120611.B ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155239 ENSGT00940000159188 ENSGT00940000157683 ENSGT00940000162732 ENSGT00940000159344 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Clown anemonefish MODERN SPECIES 1854 ENSAOCG00000019325 #26 ENSAOCG00000019353 #18 ENSAOCG00000019370 satb1a (ENSAOCG00000019435) ##19 tbc1d5 (ENSAOCG00000001411) #20 ENSAOCG00000019496 ##21 DNAH3 (ENSAOCG00000001983) dazl (ENSAOCG00000019742) #22 ENSAOCG00000002490 #23 oxnad1 (ENSAOCG00000019771) #24 ENSAOCG00000002340 ENSAOCG00000001440 FKBP14 (ENSAOCG00000019796) COLQ (ENSAOCG00000001460) #30 ENSAOCG00000001463 ENSAOCG00000019842 nfe2l3 (ENSAOCG00000001467) cbx3a (ENSAOCG00000019896) snx10a (ENSAOCG00000019909) NTNG1 (ENSAOCG00000019963) Orange clownfish MODERN SPECIES 8 npy (ENSAPEG00000018511) fam221a (ENSAPEG00000018529) ccdc126 (ENSAPEG00000018545) tra2a (ENSAPEG00000018557) igf2bp3 (ENSAPEG00000018592) GPNMB (ENSAPEG00000018638) ENSAPEG00000018653 #26 ENSAPEG00000018780 #18 satb1a (ENSAPEG00000018810) ##19 tbc1d5 (ENSAPEG00000018871) #20 ENSAPEG00000018980 ##21 ENSAPEG00000018987 ENSAPEG00000018991 ENSAPEG00000019029 ENSAPEG00000019059 dazl (ENSAPEG00000019114) #22 ENSAPEG00000019138 #23 ENSAPEG00000019149 #23 oxnad1 (ENSAPEG00000019163) #24 ENSAPEG00000019182 ENSAPEG00000019216 FKBP14 (ENSAPEG00000019236) COLQ (ENSAPEG00000019258) #30 ENSAPEG00000019301 ENSAPEG00000019310 nfe2l3 (ENSAPEG00000019329) cbx3a (ENSAPEG00000019335) snx10a (ENSAPEG00000019361) hoxa1a (ENSAPEG00000019509) ENSAPEG00000019539 hoxa3a (ENSAPEG00000019555) Spiny chromis MODERN SPECIES 2393 dazl (ENSAPOG00000004922) #22 RFTN1 (ENSAPOG00000004887) #23 oxnad1 (ENSAPOG00000004865) #24 ENSAPOG00000004851 ENSAPOG00000004828 FKBP14 (ENSAPOG00000004810) Bicolor damselfish MODERN SPECIES 996 ENSSPAG00000013601 ##21 DNAH3 (ENSSPAG00000013626) dazl (ENSSPAG00000013741) #22 ENSSPAG00000013764 #23 oxnad1 (ENSSPAG00000013778) #24 ENSSPAG00000013795 ENSSPAG00000013810 FKBP14 (ENSSPAG00000013868) ENSSPAG00000013885 #30 ENSSPAG00000013919 ENSSPAG00000013927 nfe2l3 (ENSSPAG00000013936) cbx3a (ENSSPAG00000013950) snx10a (ENSSPAG00000013977) Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.x.b ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.x.b ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.x.b ENSGT00940000154959.w ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000155239.g.a ENSGT00940000155239.h ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.w ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00960000188241 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000155239.h ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.x.b ENSGT00940000154959.w ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00960000188241 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000155239.h ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959.x.b ENSGT00940000154959.w ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Eastern happy MODERN SPECIES 13 ago2 (ENSACLG00000024684) ENSACLG00000024741 npy (ENSACLG00000024823) fam221a (ENSACLG00000024830) ccdc126 (ENSACLG00000024839) tra2a (ENSACLG00000024845) igf2bp3 (ENSACLG00000000050) GPNMB (ENSACLG00000000082) ENSACLG00000000148 #26 ENSACLG00000000166 #18 satb1a (ENSACLG00000000178) ##19 ENSACLG00000000341 tbc1d5 (ENSACLG00000000358) #20 ENSACLG00000000493 ##21 ENSACLG00000000511 dazl (ENSACLG00000000529) #22 ENSACLG00000000599 #23 oxnad1 (ENSACLG00000000611) #24 ENSACLG00000000633 ENSACLG00000000637 FKBP14 (ENSACLG00000000687) COLQ (ENSACLG00000000784) #30 ENSACLG00000000794 ENSACLG00000000868 nfe2l3 (ENSACLG00000000873) cbx3a (ENSACLG00000000888) snx10a (ENSACLG00000000942) cbx3a (ENSACLG00000000964) SNX10 (ENSACLG00000000984) hoxa1a (ENSACLG00000001107) ENSACLG00000001166 Zebra mbuna MODERN SPECIES 1104 ago2 (ENSMZEG00005008998) ENSMZEG00005009081 npy (ENSMZEG00005009105) fam221a (ENSMZEG00005009119) ccdc126 (ENSMZEG00005009136) tra2a (ENSMZEG00005009142) igf2bp3 (ENSMZEG00005009164) GPNMB (ENSMZEG00005009215) ENSMZEG00005009262 #26 ENSMZEG00005009304 #18 satb1a (ENSMZEG00005009332) ##19 tbc1d5 (ENSMZEG00005009376) #20 ENSMZEG00005009457 ##21 ENSMZEG00005009477 ENSMZEG00005009496 dazl (ENSMZEG00005009515) #22 ENSMZEG00005009549 #23 oxnad1 (ENSMZEG00005009577) #24 ENSMZEG00005009592 ENSMZEG00005009600 FKBP14 (ENSMZEG00005009610) ENSMZEG00005009648 #30 ENSMZEG00005009664 ENSMZEG00005010069 nfe2l3 (ENSMZEG00005010077) cbx3a (ENSMZEG00005010086) snx10a (ENSMZEG00005010098) hoxa1a (ENSMZEG00005010106) ENSMZEG00005010136 hoxa3a (ENSMZEG00005010153) HOXA4 (ENSMZEG00005010169) P. nyererei MODERN SPECIES 325 dlx6a (ENSPNYG00000019892) dlx5a (ENSPNYG00000019903) ago2 (ENSPNYG00000019928) ENSPNYG00000020034 npy (ENSPNYG00000020082) fam221a (ENSPNYG00000020102) ccdc126 (ENSPNYG00000020117) tra2a (ENSPNYG00000020134) igf2bp3 (ENSPNYG00000020180) GPNMB (ENSPNYG00000020212) GALNT15 (ENSPNYG00000020254) #26 KCNH8 (ENSPNYG00000020303) #18 satb1a (ENSPNYG00000020357) ##19 tbc1d5 (ENSPNYG00000020431) #20 ENSPNYG00000020478 ##21 dazl (ENSPNYG00000020484) #22 ENSPNYG00000020505 #23 oxnad1 (ENSPNYG00000020517) #24 ENSPNYG00000020536 ENSPNYG00000020546 FKBP14 (ENSPNYG00000020583) ENSPNYG00000020598 ENSPNYG00000020637 nfe2l3 (ENSPNYG00000020654) cbx3a (ENSPNYG00000020660) snx10a (ENSPNYG00000020679) hoxa1a (ENSPNYG00000020732) ENSPNYG00000020762 hoxa3a (ENSPNYG00000020795) HOXA4 (ENSPNYG00000020799) hoxa5a (ENSPNYG00000020824) Burton s mouthbrooder MODERN SPECIES 367 dlx5 (ENSHBUG00000018550) ago2 (ENSHBUG00000018515) ENSHBUG00000018379 npy (ENSHBUG00000018277) fam221a (ENSHBUG00000018259) ccdc126 (ENSHBUG00000018240) tra2a (ENSHBUG00000018234) igf2bp3 (ENSHBUG00000018217) GPNMB (ENSHBUG00000018133) GALNT15 (ENSHBUG00000018069) #26 KCNH8 (ENSHBUG00000018004) #18 satb1a (ENSHBUG00000017651) ##19 tbc1d5 (ENSHBUG00000017515) #20 ENSHBUG00000017472 ##21 ENSHBUG00000017460 dazl (ENSHBUG00000017426) #22 ENSHBUG00000017374 #23 oxnad1 (ENSHBUG00000017361) #24 ENSHBUG00000017327 FKBP14 (ENSHBUG00000017312) ENSHBUG00000017296 #30 ENSHBUG00000000517 ENSHBUG00000017056 nfe2l3 (ENSHBUG00000017043) cbx3a (ENSHBUG00000017035) snx10a (ENSHBUG00000017009) hoxa1a (ENSHBUG00000016813) ENSHBUG00000016786 hoxa3a (ENSHBUG00000016774) HOXA4 (ENSHBUG00000016766) hoxa5a (ENSHBUG00000016757) Lyretail cichlid MODERN SPECIES 302 dlx5a (ENSNBRG00000006163) ago2 (ENSNBRG00000006100) ENSNBRG00000006059 npy (ENSNBRG00000006043) fam221a (ENSNBRG00000006017) ccdc126 (ENSNBRG00000006012) tra2a (ENSNBRG00000005992) igf2bp3 (ENSNBRG00000005961) GPNMB (ENSNBRG00000005918) GALNT15 (ENSNBRG00000005894) #26 ENSNBRG00000005869 #18 satb1a (ENSNBRG00000005825) ##19 tbc1d5 (ENSNBRG00000005765) #20 ENSNBRG00000005550 ##21 ENSNBRG00000005462 dazl (ENSNBRG00000005425) #22 ENSNBRG00000005412 #23 oxnad1 (ENSNBRG00000005394) #24 ENSNBRG00000005368 ENSNBRG00000005349 FKBP14 (ENSNBRG00000005341) FKBP14 (ENSNBRG00000005325) ENSNBRG00000005295 #30 ENSNBRG00000005171 ENSNBRG00000005134 nfe2l3 (ENSNBRG00000005122) cbx3a (ENSNBRG00000005093) snx10a (ENSNBRG00000004965) hoxa1a (ENSNBRG00000004915) ENSNBRG00000004855 hoxa3a (ENSNBRG00000004849) Nile tilapia MODERN SPECIES 13 dlx5 (ENSONIG00000040151) ago2 (ENSONIG00000010747) ENSONIG00000004490 npy (ENSONIG00000037888) fam221a (ENSONIG00000004501) ccdc126 (ENSONIG00000033679) tra2a (ENSONIG00000033161) igf2bp3 (ENSONIG00000004506) GPNMB (ENSONIG00000004514) GALNT15 (ENSONIG00000004516) #26 ENSONIG00000004527 #18 satb1a (ENSONIG00000004539) ##19 tbc1d5 (ENSONIG00000004554) #20 ENSONIG00000004560 ##21 ENSONIG00000039060 dazl (ENSONIG00000004563) #22 ENSONIG00000004569 #23 oxnad1 (ENSONIG00000004575) #24 ENSONIG00000021345 ENSONIG00000004576 FKBP14 (ENSONIG00000004578) ENSONIG00000004581 #30 ENSONIG00000008589 ENSONIG00000004585 nfe2l3 (ENSONIG00000004586) cbx3a (ENSONIG00000004588) snx10a (ENSONIG00000004590) hoxa1a (ENSONIG00000004591) ENSONIG00000004592 hoxa3a (ENSONIG00000004593) HOXA4 (ENSONIG00000004594) Midas cichlid MODERN SPECIES 563 dlx5a (ENSACIG00000001172) ago2 (ENSACIG00000001179) ENSACIG00000001238 npy (ENSACIG00000001268) fam221a (ENSACIG00000001284) ccdc126 (ENSACIG00000001326) tra2a (ENSACIG00000001333) igf2bp3 (ENSACIG00000001392) GPNMB (ENSACIG00000001432) ENSACIG00000001491 #26 ENSACIG00000001575 #18 satb1a (ENSACIG00000001608) ##19 tbc1d5 (ENSACIG00000001681) #20 ENSACIG00000001735 ##21 DNAH3 (ENSACIG00000001775) dazl (ENSACIG00000001931) #22 ENSACIG00000001960 #23 oxnad1 (ENSACIG00000001969) #24 ENSACIG00000001986 ENSACIG00000001998 FKBP14 (ENSACIG00000002030) ENSACIG00000002046 #30 ENSACIG00000002071 nfe2l3 (ENSACIG00000002095) cbx3a (ENSACIG00000002111) snx10a (ENSACIG00000002122) hoxa1a (ENSACIG00000002201) ENSACIG00000002229 hoxa3a (ENSACIG00000002266) HOXA4 (ENSACIG00000002307) hoxa5a (ENSACIG00000002319) Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000162818.c.b.e.a.a ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000166841 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000162818.c.b.e.a.a ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f Poecilia ANCESTRAL SPECIES 24 ENSGT00940000166841 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000162818.c.b.e.a.a ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f NAME_6 ANCESTRAL SPECIES 131 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a.c ##21 ENSGT00940000155660.a.d ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000162818.c.b.e.a.a ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f Amazon molly MODERN SPECIES 389 fam221a (ENSPFOG00000005943) npy (ENSPFOG00000021751) ENSPFOG00000005576 ago2 (ENSPFOG00000005321) dlx5a (ENSPFOG00000005189) ENSPFOG00000005103 ENSPFOG00000005030 sem1 (ENSPFOG00000005003) DYNC1I1 (ENSPFOG00000004865) ENSPFOG00000004661 #18 satb1a (ENSPFOG00000004509) ##19 tbc1d5 (ENSPFOG00000004071) #20 ENSPFOG00000003495 ##21 ENSPFOG00000003548 ##21 DNAH3 (ENSPFOG00000003449) dazl (ENSPFOG00000003357) #22 ENSPFOG00000003182 #23 oxnad1 (ENSPFOG00000003073) #24 ENSPFOG00000020429 ENSPFOG00000002982 FKBP14 (ENSPFOG00000003022) ENSPFOG00000002970 ENSPFOG00000002807 #30 ENSPFOG00000002764 ENSPFOG00000002759 ENSPFOG00000002750 nfe2l3 (ENSPFOG00000002719) cbx3a (ENSPFOG00000002688) snx10a (ENSPFOG00000002685) hoxa1a (ENSPFOG00000002670) ENSPFOG00000022132 Sailfin molly MODERN SPECIES 141 ENSPLAG00000021626 ##21 ENSPLAG00000021632 ENSPLAG00000021650 ENSPLAG00000021663 ENSPLAG00000021687 dazl (ENSPLAG00000021715) #22 ENSPLAG00000021725 #23 oxnad1 (ENSPLAG00000021734) #24 ENSPLAG00000021739 ENSPLAG00000021767 FKBP14 (ENSPLAG00000021776) ENSPLAG00000021790 ENSPLAG00000021801 ENSPLAG00000021808 ENSPLAG00000021827 nfe2l3 (ENSPLAG00000021833) cbx3a (ENSPLAG00000021841) snx10a (ENSPLAG00000021857) hoxa1a (ENSPLAG00000021884) ENSPLAG00000021887 hoxa3a (ENSPLAG00000021890) Guppy MODERN SPECIES 441 npy (ENSPREG00000001965) fam221a (ENSPREG00000001870) ccdc126 (ENSPREG00000001841) igf2bp3 (ENSPREG00000001808) ENSPREG00000001773 KCNH8 (ENSPREG00000001739) #18 ENSPREG00000001706 ##19 ENSPREG00000001606 tbc1d5 (ENSPREG00000001475) #20 ENSPREG00000001422 ##21 ENSPREG00000001409 ENSPREG00000001385 ENSPREG00000001361 ENSPREG00000001338 ENSPREG00000001240 dazl (ENSPREG00000001227) #22 ENSPREG00000001215 #23 oxnad1 (ENSPREG00000001189) #24 ENSPREG00000001172 FKBP14 (ENSPREG00000001161) ENSPREG00000001089 ENSPREG00000001059 ENSPREG00000001010 ENSPREG00000000998 #30 ENSPREG00000000816 ENSPREG00000000800 nfe2l3 (ENSPREG00000000792) cbx3a (ENSPREG00000000774) snx10a (ENSPREG00000000706) hoxa1a (ENSPREG00000000658) ENSPREG00000000568 Platyfish MODERN SPECIES 4 ENSXMAG00000000822 npy (ENSXMAG00000000838) fam221a (ENSXMAG00000000839) ccdc126 (ENSXMAG00000000841) igf2bp3 (ENSXMAG00000027959) ENSXMAG00000000862 ENSXMAG00000000864 #18 satb1a (ENSXMAG00000000865) ##19 tbc1d5 (ENSXMAG00000000878) #20 ENSXMAG00000000895 ##21 ENSXMAG00000023317 ENSXMAG00000021242 ENSXMAG00000027874 ENSXMAG00000027381 ENSXMAG00000021982 dazl (ENSXMAG00000000965) #22 ENSXMAG00000022206 #23 oxnad1 (ENSXMAG00000000980) #24 ENSXMAG00000020143 ENSXMAG00000000986 FKBP14 (ENSXMAG00000026229) ENSXMAG00000020144 ENSXMAG00000025378 ENSXMAG00000026168 #30 ENSXMAG00000001014 nfe2l3 (ENSXMAG00000021020) cbx3a (ENSXMAG00000001027) snx10a (ENSXMAG00000001035) hoxa1a (ENSXMAG00000001039) ENSXMAG00000001041 hoxa3a (ENSXMAG00000028550) NAME_4 ANCESTRAL SPECIES 107 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000162818.c.b.e.a.a ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157883.a.b.f.pb.b ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f Mummichog MODERN SPECIES 2329 dlx6a (ENSFHEG00000016125) dlx5a (ENSFHEG00000016102) ago2 (ENSFHEG00000016080) ENSFHEG00000016006 npy (ENSFHEG00000015976) fam221a (ENSFHEG00000015957) ccdc126 (ENSFHEG00000000397) igf2bp3 (ENSFHEG00000015920) ENSFHEG00000015851 ENSFHEG00000015773 #18 ENSFHEG00000014586 ##19 tbc1d5 (ENSFHEG00000014560) #20 ENSFHEG00000014358 ##21 DNAH3 (ENSFHEG00000014337) dazl (ENSFHEG00000000634) #22 ENSFHEG00000014208 #23 oxnad1 (ENSFHEG00000014203) #24 ENSFHEG00000014192 ENSFHEG00000014181 FKBP14 (ENSFHEG00000014170) COLQ (ENSFHEG00000014155) #30 ENSFHEG00000014131 ENSFHEG00000014122 NPVF (ENSFHEG00000014120) nfe2l3 (ENSFHEG00000014108) cbx3a (ENSFHEG00000014100) snx10a (ENSFHEG00000014090) hoxa1a (ENSFHEG00000013905) ENSFHEG00000013857 hoxa3a (ENSFHEG00000013849) Sheepshead minnow MODERN SPECIES 210 dlx6a (ENSCVAG00000008641) dlx5a (ENSCVAG00000008663) ago2 (ENSCVAG00000008763) ENSCVAG00000008840 npy (ENSCVAG00000000879) fam221a (ENSCVAG00000008865) ccdc126 (ENSCVAG00000008872) igf2bp3 (ENSCVAG00000008891) ENSCVAG00000008949 ENSCVAG00000008983 #26 KCNH8 (ENSCVAG00000009230) #18 satb1a (ENSCVAG00000009409) ##19 tbc1d5 (ENSCVAG00000000276) #20 ENSCVAG00000000715 ##21 dazl (ENSCVAG00000009591) #22 RFTN1 (ENSCVAG00000009601) #23 oxnad1 (ENSCVAG00000009610) #24 ENSCVAG00000009624 ENSCVAG00000009629 FKBP14 (ENSCVAG00000009636) ENSCVAG00000009691 COLQ (ENSCVAG00000009761) #30 ENSCVAG00000009771 npvf (ENSCVAG00000009777) nfe2l3 (ENSCVAG00000009783) cbx3a (ENSCVAG00000009811) snx10a (ENSCVAG00000009971) hoxa1a (ENSCVAG00000009993) ENSCVAG00000010007 HOXA4 (ENSCVAG00000010012) Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000156869 #18 ENSGT00940000180587 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00940000157883.a.b.f.pb.a ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a Turquoise killifish MODERN SPECIES 1618 CDCA7L (ENSNFUG00015025243) HEYL (ENSNFUG00015025244) ENSNFUG00015025245 ENSNFUG00015005098 dlgap3 (ENSNFUG00015005109) pef1 (ENSNFUG00015005130) SI (ENSNFUG00015005166) ENSNFUG00015005175 ENSNFUG00015005194 TOMM7 (ENSNFUG00015005215) hycc1 (ENSNFUG00015005237) KLHL7 (ENSNFUG00015005266) CABZ01002626.1 (ENSNFUG00015005337) SMARCC1B (ENSNFUG00015005404) ENSNFUG00015005762 dazl (ENSNFUG00015005767) #22 ENSNFUG00015005769 #23 oxnad1 (ENSNFUG00015005772) #24 ENSNFUG00015005779 ENSNFUG00015005782 FKBP14 (ENSNFUG00015005790) COLQ (ENSNFUG00015005797) #30 ENSNFUG00015005804 NFE2L3 (ENSNFUG00015005812) CBX3A (ENSNFUG00015005822) snx10a (ENSNFUG00015005838) hoxa1a (ENSNFUG00015005861) ENSNFUG00015005862 hoxa3a (ENSNFUG00015005867) HOXA4 (ENSNFUG00015005870) HOXA5A (ENSNFUG00015005877) Mangrove rivulus MODERN SPECIES 2 dlx6a (ENSKMAG00000020044) dlx5a (ENSKMAG00000020028) ago2 (ENSKMAG00000019999) ENSKMAG00000019961 npy (ENSKMAG00000019938) fam221a (ENSKMAG00000019913) ccdc126 (ENSKMAG00000019896) igf2bp3 (ENSKMAG00000019838) ENSKMAG00000019800 ENSKMAG00000019769 #18 ENSKMAG00000019757 ENSKMAG00000019741 ##19 tbc1d5 (ENSKMAG00000019660) #20 ENSKMAG00000019608 ##21 DNAH3 (ENSKMAG00000019500) dazl (ENSKMAG00000019443) #22 ENSKMAG00000019415 #23 ENSKMAG00000019406 #23 oxnad1 (ENSKMAG00000019375) #24 ENSKMAG00000019364 ENSKMAG00000019351 FKBP14 (ENSKMAG00000019327) COLQ (ENSKMAG00000019299) #30 ENSKMAG00000019288 ENSKMAG00000019264 nfe2l3 (ENSKMAG00000019254) cbx3a (ENSKMAG00000019244) snx10a (ENSKMAG00000019100) hoxa1a (ENSKMAG00000019048) ENSKMAG00000019031 hoxa3a (ENSKMAG00000019016) Oryzias ANCESTRAL SPECIES 22 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x.f #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Oryzias_a ANCESTRAL SPECIES 30 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x.f #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Japanese Medaka HdrR MODERN SPECIES 2 sem1 (ENSORLG00000027365) dlx6a (ENSORLG00000004542) dlx5a (ENSORLG00000004561) AGO2 (ENSORLG00000004615) ENSORLG00000004642 npy (ENSORLG00000004649) ccdc126 (ENSORLG00000023752) tra2a (ENSORLG00000022191) igf2bp3 (ENSORLG00000004712) GPNMB (ENSORLG00000004727) ENSORLG00000004737 #26 KCNH8 (ENSORLG00000004750) #18 ENSORLG00000004761 ##19 tbc1d5 (ENSORLG00000004796) #20 ENSORLG00000004834 ##21 dazl (ENSORLG00000004848) #22 RFTN1 (ENSORLG00000004886) #23 oxnad1 (ENSORLG00000004904) #24 ENSORLG00000004907 ENSORLG00000025388 FKBP14 (ENSORLG00000004912) ENSORLG00000004944 #30 ENSORLG00000025295 nfe2l3 (ENSORLG00000004962) cbx3a (ENSORLG00000029462) snx10a (ENSORLG00000026166) hoxa1a (ENSORLG00000004981) ENSORLG00000004987 hoxa3a (ENSORLG00000027867) HOXA4 (ENSORLG00000005025) hoxa5a (ENSORLG00000026145) Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x.f #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Javanese ricefish MODERN SPECIES 2 sdhaf3 (ENSOJAG00000008283) ENSOJAG00000008255 si:ch211-165i18.2 (ENSOJAG00000008245) ENSOJAG00000007010 npy (ENSOJAG00000006875) ccdc126 (ENSOJAG00000006866) tra2a (ENSOJAG00000006860) igf2bp3 (ENSOJAG00000006832) GPNMB (ENSOJAG00000006814) ENSOJAG00000006792 #26 KCNH8 (ENSOJAG00000006704) #18 ENSOJAG00000006657 ##19 ENSOJAG00000006651 tbc1d5 (ENSOJAG00000005575) #20 ENSOJAG00000004895 ##21 dazl (ENSOJAG00000004441) #22 ENSOJAG00000004362 #23 ENSOJAG00000004347 #23 oxnad1 (ENSOJAG00000004338) #24 ENSOJAG00000004313 FKBP14 (ENSOJAG00000004301) ENSOJAG00000004275 #30 ENSOJAG00000004264 nfe2l3 (ENSOJAG00000004247) cbx3a (ENSOJAG00000004172) snx10a (ENSOJAG00000004089) hoxa1a (ENSOJAG00000004073) ENSOJAG00000004052 hoxa3a (ENSOJAG00000004029) HOXA4 (ENSOJAG00000004001) hoxa5a (ENSOJAG00000003979) Indian medaka MODERN SPECIES 3 ENSOMEG00000017662 dlx6a (ENSOMEG00000017680) dlx5a (ENSOMEG00000017685) ago2 (ENSOMEG00000017751) ENSOMEG00000017820 npy (ENSOMEG00000001014) ccdc126 (ENSOMEG00000017851) tra2a (ENSOMEG00000017864) igf2bp3 (ENSOMEG00000017916) GPNMB (ENSOMEG00000017953) ENSOMEG00000017971 #26 KCNH8 (ENSOMEG00000018013) #18 satb1a (ENSOMEG00000018126) ##19 tbc1d5 (ENSOMEG00000018290) #20 ENSOMEG00000018339 ##21 dazl (ENSOMEG00000018395) #22 RFTN1 (ENSOMEG00000018428) #23 oxnad1 (ENSOMEG00000018467) #24 ENSOMEG00000018478 ENSOMEG00000018495 FKBP14 (ENSOMEG00000018518) ENSOMEG00000018555 #30 ENSOMEG00000018577 nfe2l3 (ENSOMEG00000018610) cbx3a (ENSOMEG00000018650) snx10a (ENSOMEG00000018674) hoxa1a (ENSOMEG00000018694) ENSOMEG00000000777 HOXA4 (ENSOMEG00000018715) hoxa3a (ENSOMEG00000018727) hoxa5a (ENSOMEG00000018736) Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Siamese fighting fish MODERN SPECIES 2 dlx6a (ENSBSLG00000003257) dlx5a (ENSBSLG00000003256) ago2 (ENSBSLG00000002868) ENSBSLG00000002388 npy (ENSBSLG00000016166) ccdc126 (ENSBSLG00000016161) tra2a (ENSBSLG00000016152) igf2bp3 (ENSBSLG00000014618) GPNMB (ENSBSLG00000014590) ENSBSLG00000014584 #26 ENSBSLG00000014563 #18 satb1a (ENSBSLG00000014540) ##19 tbc1d5 (ENSBSLG00000012727) #20 ENSBSLG00000012668 ##21 DNAH3 (ENSBSLG00000012261) dazl (ENSBSLG00000012205) #22 ENSBSLG00000012189 #23 oxnad1 (ENSBSLG00000012170) #24 ENSBSLG00000012157 ENSBSLG00000012133 FKBP14 (ENSBSLG00000012125) ENSBSLG00000012090 #30 ENSBSLG00000012060 nfe2l3 (ENSBSLG00000012036) cbx3a (ENSBSLG00000011919) snx10a (ENSBSLG00000011898) hoxa1a (ENSBSLG00000011877) ENSBSLG00000011861 hoxa3a (ENSBSLG00000011839) HOXA4 (ENSBSLG00000011815) hoxa5a (ENSBSLG00000011797) Climbing perch MODERN SPECIES 2 dlx5a (ENSATEG00000026247) ago2 (ENSATEG00000000529) ENSATEG00000000607 npy (ENSATEG00000000620) fam221a (ENSATEG00000000634) ccdc126 (ENSATEG00000000665) tra2a (ENSATEG00000000671) igf2bp3 (ENSATEG00000000681) GPNMB (ENSATEG00000000764) ENSATEG00000000830 #26 ENSATEG00000000940 #18 satb1a (ENSATEG00000000974) ##19 tbc1d5 (ENSATEG00000001109) #20 ENSATEG00000001204 ##21 ENSATEG00000027399 dazl (ENSATEG00000001349) #22 ENSATEG00000001386 #23 ENSATEG00000001396 #23 oxnad1 (ENSATEG00000001424) #24 ENSATEG00000001434 ENSATEG00000001464 ENSATEG00000001514 ENSATEG00000001525 #30 ENSATEG00000001574 nfe2l3 (ENSATEG00000001620) CBX3 (ENSATEG00000001629) snx10a (ENSATEG00000001661) HOXA1 (ENSATEG00000001717) ENSATEG00000001763 HOXA3 (ENSATEG00000001808) HOXA4 (ENSATEG00000028592) Zig-zag eel MODERN SPECIES 2 ENSMAMG00000008621 npy (ENSMAMG00000008616) fam221a (ENSMAMG00000008603) ccdc126 (ENSMAMG00000008592) tra2a (ENSMAMG00000027878) igf2bp3 (ENSMAMG00000008545) GPNMB (ENSMAMG00000008513) ENSMAMG00000008498 #26 ENSMAMG00000008473 #18 satb1a (ENSMAMG00000027316) ##19 tbc1d5 (ENSMAMG00000008426) #20 ENSMAMG00000008399 ##21 ENSMAMG00000024303 ENSMAMG00000028009 ENSMAMG00000025888 dazl (ENSMAMG00000008203) #22 ENSMAMG00000024330 #23 ENSMAMG00000028333 #23 oxnad1 (ENSMAMG00000026716) #24 ENSMAMG00000008108 ENSMAMG00000008087 ENSMAMG00000027344 ENSMAMG00000008039 #30 ENSMAMG00000008025 nfe2l3 (ENSMAMG00000008016) CBX3 (ENSMAMG00000008011) snx10a (ENSMAMG00000007992) HOXA1 (ENSMAMG00000007973) ENSMAMG00000007958 hoxa3a (ENSMAMG00000007941) HOXA4 (ENSMAMG00000007955) Carangaria ANCESTRAL SPECIES 14 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Seriola ANCESTRAL SPECIES 12 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Yellowtail amberjack MODERN SPECIES 3204 ENSSLDG00000005024 ##21 DNAH3 (ENSSLDG00000005261) dazl (ENSSLDG00000005485) #22 ENSSLDG00000005518 #23 oxnad1 (ENSSLDG00000005533) #24 ENSSLDG00000005548 ENSSLDG00000005567 FKBP14 (ENSSLDG00000005590) COLQ (ENSSLDG00000005618) #30 ENSSLDG00000005643 ENSSLDG00000005659 nfe2l3 (ENSSLDG00000005672) cbx3a (ENSSLDG00000005680) snx10a (ENSSLDG00000005732) hoxa1a (ENSSLDG00000005844) ENSSLDG00000005939 hoxa3a (ENSSLDG00000006013) HOXA4 (ENSSLDG00000006027) Greater amberjack MODERN SPECIES 48 fam221a (ENSSDUG00000005642) ccdc126 (ENSSDUG00000005634) tra2a (ENSSDUG00000005610) igf2bp3 (ENSSDUG00000005535) GPNMB (ENSSDUG00000005497) ENSSDUG00000005485 #26 ENSSDUG00000005464 #18 satb1a (ENSSDUG00000005436) ##19 tbc1d5 (ENSSDUG00000005303) #20 ENSSDUG00000005269 ##21 ENSSDUG00000005261 ENSSDUG00000005250 ENSSDUG00000005235 ENSSDUG00000005221 ENSSDUG00000005200 dazl (ENSSDUG00000005172) #22 ENSSDUG00000005158 #23 oxnad1 (ENSSDUG00000005142) #24 ENSSDUG00000005132 ENSSDUG00000005117 FKBP14 (ENSSDUG00000005096) ENSSDUG00000005062 #30 ENSSDUG00000005049 ENSSDUG00000005032 nfe2l3 (ENSSDUG00000005020) cbx3a (ENSSDUG00000005004) snx10a (ENSSDUG00000004833) hoxa1a (ENSSDUG00000004791) ENSSDUG00000004775 hoxa3a (ENSSDUG00000004765) HOXA4 (ENSSDUG00000004757) Barramundi perch MODERN SPECIES 3 ENSLCAG00010017125 npy (ENSLCAG00010017108) fam221a (ENSLCAG00010017098) ENSLCAG00010017096 ccdc126 (ENSLCAG00010017095) tra2a (ENSLCAG00010017089) igf2bp3 (ENSLCAG00010017069) GPNMB (ENSLCAG00010017059) ENSLCAG00010017055 #26 ENSLCAG00010017049 #18 ENSLCAG00010017042 ##19 satb1a (ENSLCAG00010017040) ##19 tbc1d5 (ENSLCAG00010016938) #20 ENSLCAG00010016925 ##21 DNAH3 (ENSLCAG00010016780) dazl (ENSLCAG00010016730) #22 ENSLCAG00010016725 #23 oxnad1 (ENSLCAG00010016722) #24 ENSLCAG00010016719 ENSLCAG00010016711 FKBP14 (ENSLCAG00010016709) COLQ (ENSLCAG00010016703) #30 ENSLCAG00010016702 ENSLCAG00010016700 nfe2l3 (ENSLCAG00010016699) cbx3a (ENSLCAG00010016686) snx10a (ENSLCAG00010016683) hoxa1a (ENSLCAG00010016677) ENSLCAG00010016673 hoxa3a (ENSLCAG00010016667) HOXA4 (ENSLCAG00010016671) Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Tongue sole MODERN SPECIES 9 cfap20 (ENSCSEG00000014842) ENSCSEG00000014832 RECQL4 (ENSCSEG00000014814) HERPUD2 (ENSCSEG00000014805) SLC4A7 (ENSCSEG00000014757) eomesa (ENSCSEG00000014731) ENSCSEG00000014677 TGFBR2 (ENSCSEG00000014638) STT3B (ENSCSEG00000014626) ENSCSEG00000014616 ENSCSEG00000014606 ENSCSEG00000014591 ##21 ENSCSEG00000014583 ENSCSEG00000014563 ENSCSEG00000014555 dazl (ENSCSEG00000014529) #22 ENSCSEG00000014523 #23 oxnad1 (ENSCSEG00000014519) #24 ENSCSEG00000014515 ENSCSEG00000014506 FKBP14 (ENSCSEG00000014491) ENSCSEG00000014447 #30 ENSCSEG00000014427 ENSCSEG00000014403 nfe2l3 (ENSCSEG00000014383) snx10a (ENSCSEG00000014353) hoxa1a (ENSCSEG00000014346) ENSCSEG00000014339 hoxa3a (ENSCSEG00000014335) HOXA4 (ENSCSEG00000014321) hoxa5a (ENSCSEG00000014317) Turbot MODERN SPECIES 14 dlx5a (ENSSMAG00000014079) ago2 (ENSSMAG00000014089) ENSSMAG00000014160 npy (ENSSMAG00000014204) fam221a (ENSSMAG00000014220) ccdc126 (ENSSMAG00000014236) tra2a (ENSSMAG00000014242) igf2bp3 (ENSSMAG00000014262) GPNMB (ENSSMAG00000014341) ENSSMAG00000014358 #26 ENSSMAG00000014391 #18 satb1a (ENSSMAG00000014406) ##19 tbc1d5 (ENSSMAG00000014510) #20 ENSSMAG00000014560 ##21 ENSSMAG00000036740 dazl (ENSSMAG00000014694) #22 ENSSMAG00000014721 #23 oxnad1 (ENSSMAG00000014752) #24 ENSSMAG00000014767 ENSSMAG00000014778 ENSSMAG00000014788 ENSSMAG00000014800 #30 ENSSMAG00000014822 ENSSMAG00000014833 nfe2l3 (ENSSMAG00000014852) CBX3 (ENSSMAG00000014860) snx10a (ENSSMAG00000014876) ENSSMAG00000015127 HOXA1 (ENSSMAG00000015134) ENSSMAG00000015164 HOXA3 (ENSSMAG00000015176) Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00440000035378.c.b ENSGT00940000159513.h ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000155722 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000161110.a.b ENSGT00940000164972 ENSGT00940000161290 ENSGT00940000158302.d.b ENSGT00940000160103 ENSGT01030000234973 ENSGT00940000154383.a ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Fugu MODERN SPECIES 3 zbtb8b (ENSTRUG00000014848) FUCA1 (ENSTRUG00000025553) dlgap3 (ENSTRUG00000014901) gja4 (ENSTRUG00000019570) smim12 (ENSTRUG00000015020) pef1 (ENSTRUG00000015023) gjb9b (ENSTRUG00000015038) ENSTRUG00000015057 angpt2b (ENSTRUG00000015237) col9a2 (ENSTRUG00000015261) ENSTRUG00000019764 ADGRB2 (ENSTRUG00000028305) ptp4a2b (ENSTRUG00000015716) col8a2 (ENSTRUG00000024438) trappc3 (ENSTRUG00000015734) dazl (ENSTRUG00000015745) #22 oxnad1 (ENSTRUG00000015784) #24 ENSTRUG00000020614 ENSTRUG00000015805 FKBP14 (ENSTRUG00000021578) ENSTRUG00000015831 #30 ENSTRUG00000024909 rfrp (ENSTRUG00000015852) nfe2l3 (ENSTRUG00000015857) cbx3a (ENSTRUG00000015895) snx10a (ENSTRUG00000015910) hoxa1a (ENSTRUG00000015937) ENSTRUG00000015941 HOXA4 (ENSTRUG00000023173) hoxa3a (ENSTRUG00000022811) hoxa5a (ENSTRUG00000018252) Tetraodon MODERN SPECIES 15 ENSTNIG00000009225 dlgap3 (ENSTNIG00000009224) gja4 (ENSTNIG00000009223) pef1 (ENSTNIG00000009222) gjb9b (ENSTNIG00000009221) ENSTNIG00000009220 angpt2b (ENSTNIG00000009219) col9a2 (ENSTNIG00000009218) ENSTNIG00000009217 ENSTNIG00000000175 ENSTNIG00000009216 ENSTNIG00000001705 ptp4a2b (ENSTNIG00000001611) col8a2 (ENSTNIG00000009215) trappc3 (ENSTNIG00000009214) dazl (ENSTNIG00000001115) #22 ENSTNIG00000009213 #23 oxnad1 (ENSTNIG00000009212) #24 FKBP14 (ENSTNIG00000009211) ENSTNIG00000009210 #30 nfe2l3 (ENSTNIG00000009209) cbx3a (ENSTNIG00000001200) snx10a (ENSTNIG00000009208) hoxa1a (ENSTNIG00000000977) ENSTNIG00000001753 hoxa3a (ENSTNIG00000001754) HOXA4 (ENSTNIG00000001755) hoxa5a (ENSTNIG00000001756) ENSTNIG00000001582 hoxa10b (ENSTNIG00000001766) hoxa11a (ENSTNIG00000001767) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Ballan wrasse MODERN SPECIES 297 dlx5a (ENSLBEG00000005078) ago2 (ENSLBEG00000005112) ENSLBEG00000005182 npy (ENSLBEG00000005236) fam221a (ENSLBEG00000005254) ccdc126 (ENSLBEG00000005284) tra2a (ENSLBEG00000005297) igf2bp3 (ENSLBEG00000005339) GPNMB (ENSLBEG00000005453) ENSLBEG00000005479 #26 ENSLBEG00000005497 #18 satb1a (ENSLBEG00000005545) ##19 tbc1d5 (ENSLBEG00000005629) #20 ENSLBEG00000005694 ##21 DNAH3 (ENSLBEG00000005767) dazl (ENSLBEG00000006023) #22 ENSLBEG00000006086 #23 oxnad1 (ENSLBEG00000006128) #24 ENSLBEG00000006164 ENSLBEG00000006184 FKBP14 (ENSLBEG00000006207) ENSLBEG00000006241 #30 ENSLBEG00000006274 ENSLBEG00000006286 nfe2l3 (ENSLBEG00000006302) cbx3a (ENSLBEG00000006320) snx10a (ENSLBEG00000006336) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Perciformes ANCESTRAL SPECIES 11 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT01030000234992 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Pike perch MODERN SPECIES 41 dlx5a (ENSSLUG00000007147) ago2 (ENSSLUG00000002830) ENSSLUG00000002011 npy (ENSSLUG00000001901) fam221a (ENSSLUG00000001895) ccdc126 (ENSSLUG00000001888) tra2a (ENSSLUG00000001878) igf2bp3 (ENSSLUG00000001733) GPNMB (ENSSLUG00000001528) ENSSLUG00000001516 #26 KCNH8 (ENSSLUG00000001500) #18 satb1a (ENSSLUG00000014957) ##19 tbc1d5 (ENSSLUG00000014419) #20 ENSSLUG00000014304 ##21 DNAH3 (ENSSLUG00000011601) dazl (ENSSLUG00000011304) #22 ENSSLUG00000011298 #23 oxnad1 (ENSSLUG00000011292) #24 ENSSLUG00000011290 ENSSLUG00000011287 FKBP14 (ENSSLUG00000011283) COLQ (ENSSLUG00000011276) #30 ENSSLUG00000011273 ENSSLUG00000011269 nfe2l3 (ENSSLUG00000011266) cbx3a (ENSSLUG00000011259) snx10a (ENSSLUG00000011232) hoxa1a (ENSSLUG00000011224) ENSSLUG00000011223 hoxa3a (ENSSLUG00000011219) HOXA4 (ENSSLUG00000011218) Channel bull blenny MODERN SPECIES 2 npy (ENSCGOG00000005190) fam221a (ENSCGOG00000005188) ccdc126 (ENSCGOG00000005187) tra2a (ENSCGOG00000005185) igf2bp3 (ENSCGOG00000004521) GPNMB (ENSCGOG00000004479) GALNT15 (ENSCGOG00000004405) #26 KCNH8 (ENSCGOG00000004375) #18 ENSCGOG00000004373 ##19 tbc1d5 (ENSCGOG00000002723) #20 ENSCGOG00000002550 ##21 ENSCGOG00000002526 ENSCGOG00000002521 ENSCGOG00000002519 ENSCGOG00000002511 dazl (ENSCGOG00000002506) #22 ENSCGOG00000002503 ENSCGOG00000002501 #23 oxnad1 (ENSCGOG00000002500) #24 ENSCGOG00000002497 ENSCGOG00000002489 FKBP14 (ENSCGOG00000002494) COLQ (ENSCGOG00000002481) #30 ENSCGOG00000002478 ENSCGOG00000002473 nfe2l3 (ENSCGOG00000002472) cbx3a (ENSCGOG00000002431) snx10a (ENSCGOG00000002413) hoxa1a (ENSCGOG00000002411) ENSCGOG00000002408 hoxa3a (ENSCGOG00000002407) Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Lumpfish MODERN SPECIES 2 ago2 (ENSCLMG00005014637) ENSCLMG00005018744 npy (ENSCLMG00005019264) fam221a (ENSCLMG00005019265) ccdc126 (ENSCLMG00005019266) tra2a (ENSCLMG00005019267) igf2bp3 (ENSCLMG00005019273) GPNMB (ENSCLMG00005019275) ENSCLMG00005019312 #26 ENSCLMG00005019314 #18 ENSCLMG00005019330 ##19 tbc1d5 (ENSCLMG00005019337) #20 ENSCLMG00005020074 ##21 ENSCLMG00005020080 ENSCLMG00005020085 dazl (ENSCLMG00005020089) #22 ENSCLMG00005020090 #23 oxnad1 (ENSCLMG00005020091) #24 ENSCLMG00005020092 ENSCLMG00005020096 FKBP14 (ENSCLMG00005020097) ENSCLMG00005020100 #30 ENSCLMG00005020101 ENSCLMG00005020102 nfe2l3 (ENSCLMG00005020103) cbx3a (ENSCLMG00005020104) snx10a (ENSCLMG00005020105) hoxa1a (ENSCLMG00005020112) ENSCLMG00005020113 hoxa3a (ENSCLMG00005020115) HOXA4 (ENSCLMG00005020116) Stickleback MODERN SPECIES 9 dlx6a (ENSGACG00000006780) dlx5a (ENSGACG00000006792) ago2 (ENSGACG00000006796) ENSGACG00000006849 npy (ENSGACG00000006863) fam221a (ENSGACG00000006870) ENSGACG00000006875 tra2a (ENSGACG00000006878) igf2bp3 (ENSGACG00000006894) GPNMB (ENSGACG00000006942) ENSGACG00000006954 #18 satb1a (ENSGACG00000006960) ##19 tbc1d5 (ENSGACG00000006967) #20 ENSGACG00000006988 ##21 ENSGACG00000006993 dazl (ENSGACG00000007001) #22 ENSGACG00000007006 #23 oxnad1 (ENSGACG00000007010) #24 ENSGACG00000007024 ENSGACG00000007025 FKBP14 (ENSGACG00000007031) ENSGACG00000007049 #30 cycsb (ENSGACG00000007058) nfe2l3 (ENSGACG00000007066) cbx3a (ENSGACG00000007069) snx10a (ENSGACG00000007074) hoxa1a (ENSGACG00000007085) ENSGACG00000007090 hoxa3a (ENSGACG00000007094) HOXA4 (ENSGACG00000007100) hoxa5a (ENSGACG00000007108) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 Gilthead seabream MODERN SPECIES 17 ago2 (ENSSAUG00010013491) ENSSAUG00010019199 npy (ENSSAUG00010020936) fam221a (ENSSAUG00010020937) ccdc126 (ENSSAUG00010020938) tra2a (ENSSAUG00010020940) igf2bp3 (ENSSAUG00010020965) GPNMB (ENSSAUG00010022256) GALNT15 (ENSSAUG00010022257) #26 ENSSAUG00010022259 #18 ENSSAUG00010022260 #18 satb1a (ENSSAUG00010022261) ##19 tbc1d5 (ENSSAUG00010022263) #20 ENSSAUG00010022956 ##21 DNAH3 (ENSSAUG00010023021) dazl (ENSSAUG00010023098) #22 ENSSAUG00010023101 #23 oxnad1 (ENSSAUG00010023102) #24 ENSSAUG00010023103 ENSSAUG00010023104 FKBP14 (ENSSAUG00010023105) ENSSAUG00010023106 #30 ENSSAUG00010023107 ENSSAUG00010023108 nfe2l3 (ENSSAUG00010023109) cbx3a (ENSSAUG00010023110) snx10a (ENSSAUG00010023111) hoxa1a (ENSSAUG00010023113) ENSSAUG00010023114 hoxa3a (ENSSAUG00010023115) HOXA4 (ENSSAUG00010023116) Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 #26 ENSGT00940000156869 #18 ENSGT00390000008096.C.b ##19 ENSGT00940000157121 #20 ENSGT00940000155660.a ##21 ENSGT00940000154959 ENSGT00530000063480.b #22 ENSGT00530000063609.b.x #23 ENSGT00390000004280 #24 ENSGT00760000119737 ENSGT00940000160267 ENSGT00940000157858.j ENSGT00940000157248.c.b #30 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000153305 ENSGT00940000156007.k ENSGT00940000157315 ENSGT00940000155029.c.a.f ENSGT00940000159522 ENSGT00940000158988.a.a ENSGT00940000159894 European seabass MODERN SPECIES 22 dlx5a (ENSDLAG00005034499) ago2 (ENSDLAG00005009789) ENSDLAG00005008554 npy (ENSDLAG00005008510) fam221a (ENSDLAG00005008493) ccdc126 (ENSDLAG00005033349) tra2a (ENSDLAG00005008478) igf2bp3 (ENSDLAG00005007961) GPNMB (ENSDLAG00005007926) ENSDLAG00005007909 #26 ENSDLAG00005007626 #18 satb1a (ENSDLAG00005031860) ##19 tbc1d5 (ENSDLAG00005006722) #20 ENSDLAG00005005956 ##21 ENSDLAG00005003054 dazl (ENSDLAG00005002759) #22 ENSDLAG00005002699 #23 oxnad1 (ENSDLAG00005002662) #24 ENSDLAG00005002604 ENSDLAG00005002367 ENSDLAG00005030672 ENSDLAG00005002300 #30 ENSDLAG00005019969 NFE2L3 (ENSDLAG00005028211) SNX10 (ENSDLAG00005019932) hoxa1a (ENSDLAG00005019926) hoxa3a (ENSDLAG00005026758) HOXA4 (ENSDLAG00005027508) HOXA7 (ENSDLAG00005032717) ENSDLAG00005033816 ENSDLAG00005019887 Large yellow croaker MODERN SPECIES 484 dlx5a (ENSLCRG00005020152) ago2 (ENSLCRG00005016042) ENSLCRG00005014982 npy (ENSLCRG00005014974) fam221a (ENSLCRG00005014961) ccdc126 (ENSLCRG00005014960) ENSLCRG00005014959 igf2bp3 (ENSLCRG00005014865) GPNMB (ENSLCRG00005014861) ENSLCRG00005014856 #26 ENSLCRG00005014559 #18 satb1a (ENSLCRG00005014537) ##19 tbc1d5 (ENSLCRG00005011243) #20 ENSLCRG00005011199 ##21 DNAH3 (ENSLCRG00005008939) dazl (ENSLCRG00005008918) #22 ENSLCRG00005008917 #23 oxnad1 (ENSLCRG00005008916) #24 ENSLCRG00005008913 ENSLCRG00005008912 FKBP14 (ENSLCRG00005008910) COLQ (ENSLCRG00005008908) #30 ENSLCRG00005008907 ENSLCRG00005008906 nfe2l3 (ENSLCRG00005008904) cbx3a (ENSLCRG00005008899) snx10a (ENSLCRG00005008897) hoxa1a (ENSLCRG00005008896) ENSLCRG00005008895 hoxa3a (ENSLCRG00005008893) HOXA4 (ENSLCRG00005008891) Tiger tail seahorse MODERN SPECIES 294 ENSHCOG00000016627 ##21 dazl (ENSHCOG00000016622) #22 ENSHCOG00000016619 #23 oxnad1 (ENSHCOG00000016605) #24 ENSHCOG00000016602 ENSHCOG00000016597 FKBP14 (ENSHCOG00000016583) FKBP14 (ENSHCOG00000000465) ENSHCOG00000000463 #30 ENSHCOG00000016504 ENSHCOG00000016495 nfe2l3 (ENSHCOG00000016480) cbx3a (ENSHCOG00000016474) snx10a (ENSHCOG00000016464) Pinecone sodierfish MODERN SPECIES 2 nfe2l3 (ENSMMDG00005023087) ENSMMDG00005023084 ENSMMDG00005023083 ENSMMDG00005023076 #30 FKBP14 (ENSMMDG00005023075) ENSMMDG00005023073 ENSMMDG00005023071 ENSMMDG00005023069 #18 ENSMMDG00005023066 satb1a (ENSMMDG00005023062) ##19 tbc1d5 (ENSMMDG00005022004) #20 ENSMMDG00005021849 ##21 ENSMMDG00005021839 ENSMMDG00005021835 ENSMMDG00005021832 dazl (ENSMMDG00005021827) #22 ENSMMDG00005021823 #23 ENSMMDG00005021821 #23 oxnad1 (ENSMMDG00005021818) #24 GALNT15 (ENSMMDG00005021813) #26 GPNMB (ENSMMDG00005021807) igf2bp3 (ENSMMDG00005021694) tra2a (ENSMMDG00005021678) ccdc126 (ENSMMDG00005021677) fam221a (ENSMMDG00005021674) npy (ENSMMDG00005021673) ENSMMDG00005021670 ago2 (ENSMMDG00005018499) dlx5a (ENSMMDG00005018418) dlx6a (ENSMMDG00005018416) sem1 (ENSMMDG00005018414) Cod MODERN SPECIES 14 hoxa3a (ENSGMOG00000022984) ENSGMOG00000013834 HOXA1 (ENSGMOG00000030787) snx10a (ENSGMOG00000013310) CBX3 (ENSGMOG00000013305) nfe2l3 (ENSGMOG00000013292) ENSGMOG00000022248 ENSGMOG00000013273 #30 ENSGMOG00000013265 ENSGMOG00000026246 ENSGMOG00000013231 KCNH8 (ENSGMOG00000006973) #18 satb1a (ENSGMOG00000011439) ##19 tbc1d5 (ENSGMOG00000011459) #20 ENSGMOG00000011478 ##21 dazl (ENSGMOG00000011491) #22 RFTN1 (ENSGMOG00000011560) #23 oxnad1 (ENSGMOG00000011578) #24 GALNT15 (ENSGMOG00000029953) #26 GPNMB (ENSGMOG00000013797) igf2bp3 (ENSGMOG00000013764) tra2a (ENSGMOG00000013740) ccdc126 (ENSGMOG00000032506) fam221a (ENSGMOG00000013716) NPY (ENSGMOG00000013705) ENSGMOG00000013684 ago2 (ENSGMOG00000013651) dlx5a (ENSGMOG00000013639) dlx6a (ENSGMOG00000013631) sem1 (ENSGMOG00000026628) SLC25A13 (ENSGMOG00000013604) Spotted gar MODERN SPECIES 649 rpl15 (ENSLOCG00000006808) #8 nkiras1 (ENSLOCG00000006787) #9 UBE2E1 (ENSLOCG00000006775) #10 UBE2E2 (ENSLOCG00000006730) #11 ENSLOCG00000006712 ENSLOCG00000006695 ENSLOCG00000006661 ##13 kat2b (ENSLOCG00000006617) #14 PP2D1 (ENSLOCG00000006606) #15 rab5ab (ENSLOCG00000006591) #16 efhb (ENSLOCG00000006567) #17 KCNH8 (ENSLOCG00000006545) #18 satb1a (ENSLOCG00000006524) ##19 tbc1d5 (ENSLOCG00000006501) #20 PLCL2 (ENSLOCG00000006475) #21 dazl (ENSLOCG00000006452) #22 RFTN1 (ENSLOCG00000006436) #23 oxnad1 (ENSLOCG00000006425) #24 ints8 (ENSLOCG00000006404) ccne2 (ENSLOCG00000006388) tp53inp1 (ENSLOCG00000006359) nagpa (ENSLOCG00000006341) ENSLOCG00000006333 ENSLOCG00000006314 ENSLOCG00000006294 ENSLOCG00000006274 rbm24b (ENSLOCG00000006244) CHN2 (ENSLOCG00000006208) ENSLOCG00000018331 WIPF3 (ENSLOCG00000006162) fkbp14 (ENSLOCG00000006139) Reedfish MODERN SPECIES 4 nkiras1 (ENSECRG00000018221) #9 UBE2E1 (ENSECRG00000018245) #10 ENSECRG00000018320 UBE2E2 (ENSECRG00000018668) #11 ZNF385D (ENSECRG00000018686) #12 ENSECRG00000018715 ##13 kat2b (ENSECRG00000018781) #14 ddx21 (ENSECRG00000019058) PP2D1 (ENSECRG00000020433) #15 rab5ab (ENSECRG00000020444) #16 ENSECRG00000020467 KCNH8 (ENSECRG00000020514) #18 satb1a (ENSECRG00000020534) ##19 tbc1d5 (ENSECRG00000020562) #20 PLCL2 (ENSECRG00000020617) #21 dazl (ENSECRG00000020678) #22 RFTN1 (ENSECRG00000020704) #23 oxnad1 (ENSECRG00000020731) #24 ENSECRG00000020745 GALNT15 (ENSECRG00000020760) #26 ENSECRG00000020785 ANKRD28 (ENSECRG00000020828) #27 btd (ENSECRG00000020919) #28 hacl1 (ENSECRG00000020942) #29 COLQ (ENSECRG00000020973) #30 plekha8 (ENSECRG00000021010) fkbp14 (ENSECRG00000021041) SCRN1 (ENSECRG00000021054) WIPF3 (ENSECRG00000021065) ENSECRG00000021076 ENSECRG00000021118