Gnathostomata ANCESTRAL SPECIES 364 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 Euteleostomi ANCESTRAL SPECIES 11 ENSGT00940000164855 ENSGT00940000159402 ENSGT00940000160000 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT00940000166171 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Sarcopterygii ANCESTRAL SPECIES 16 ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000166133 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT00940000166171 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT00940000166171 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Amniota ANCESTRAL SPECIES 1 ENSGT00940000164855 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Mammalia ANCESTRAL SPECIES 2 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000003880.b.b #25 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Theria ANCESTRAL SPECIES 4 ENSGT00940000156226 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Eutheria ANCESTRAL SPECIES 9 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Primates ANCESTRAL SPECIES 5 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000155676.q ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000154281.m.b.a.a.a.a ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Rhinopithecus ANCESTRAL SPECIES ENSGT00390000006522.b #22 Golden snub-nosed monkey MODERN SPECIES 1726 DSE (ENSRROG00000033698) #22 ENSRROG00000022531 #23 CALHM6 (ENSRROG00000024470) #24 TRAPPC3L (ENSRROG00000036813) #25 CALHM5 (ENSRROG00000028944) #26 CALHM4 (ENSRROG00000030193) #27 RWDD1 (ENSRROG00000034466) #28 RSPH4A (ENSRROG00000034483) #29 ZUP1 (ENSRROG00000001608) #30 KPNA5 (ENSRROG00000007638) #31 FAM162B (ENSRROG00000002813) #32 GPRC6A (ENSRROG00000029975) #33 RFX6 (ENSRROG00000042517) #34 Black snub-nosed monkey MODERN SPECIES 1771 DSE (ENSRBIG00000035087) #22 ENSRBIG00000001662 ##23 CALHM6 (ENSRBIG00000007538) #24 CALHM5 (ENSRBIG00000027627) #26 TRAPPC3L (ENSRBIG00000028722) #25 CALHM4 (ENSRBIG00000032541) #27 ENSRBIG00000023199 #28 RSPH4A (ENSRBIG00000033414) #29 ZUP1 (ENSRBIG00000042607) #30 KPNA5 (ENSRBIG00000029401) #31 FAM162B (ENSRBIG00000032712) #32 GPRC6A (ENSRBIG00000029856) #33 RFX6 (ENSRBIG00000044389) #34 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000154281.m.b.a.a.a.a ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676.r ENSGT00940000162991 ENSGT00940000162821 ENSGT00860000136122 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Olive baboon MODERN SPECIES 16 LAMA4 (ENSPANG00000012999) ENSPANG00000032439 ENSPANG00000040680 ENSPANG00000049180 MARCKS (ENSPANG00000023060) HDAC2 (ENSPANG00000004969) HS3ST5 (ENSPANG00000020863) ENSPANG00000039146 ENSPANG00000045691 FRK (ENSPANG00000015735) COL10A1 (ENSPANG00000022055) NT5DC1 (ENSPANG00000024103) TSPYL4 (ENSPANG00000035333) TSPYL1 (ENSPANG00000007994) ENSPANG00000044294 DSE (ENSPANG00000000826) #22 ENSPANG00000044624 CALHM6 (ENSPANG00000038049) #24 CALHM5 (ENSPANG00000006250) #26 TRAPPC3L (ENSPANG00000024071) #25 CALHM4 (ENSPANG00000013290) #27 RWDD1 (ENSPANG00000008148) #28 RSPH4A (ENSPANG00000006886) #29 ZUP1 (ENSPANG00000021725) #30 KPNA5 (ENSPANG00000008670) #31 FAM162B (ENSPANG00000022513) #32 GPRC6A (ENSPANG00000024072) #33 RFX6 (ENSPANG00000008240) #34 VGLL2 (ENSPANG00000016788) ROS1 (ENSPANG00000022514) ENSPANG00000049743 Cercopithecinae_d ANCESTRAL SPECIES 70 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00860000136122 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Sooty mangabey MODERN SPECIES 590 CCN6 (ENSCATG00000028548) TUBE1 (ENSCATG00000036781) FAM229B (ENSCATG00000033467) LAMA4 (ENSCATG00000035013) ENSCATG00000002853 ENSCATG00000033527 ENSCATG00000023134 MARCKS (ENSCATG00000009912) HDAC2 (ENSCATG00000042591) HS3ST5 (ENSCATG00000028503) FRK (ENSCATG00000039585) NT5DC1 (ENSCATG00000021794) COL10A1 (ENSCATG00000019945) TSPYL4 (ENSCATG00000041203) ENSCATG00000043899 DSE (ENSCATG00000039900) #22 CALHM6 (ENSCATG00000041474) #24 TRAPPC3L (ENSCATG00000039208) #25 CALHM5 (ENSCATG00000013734) #26 CALHM4 (ENSCATG00000022187) #27 RWDD1 (ENSCATG00000030010) #28 RSPH4A (ENSCATG00000031193) #29 ZUP1 (ENSCATG00000042362) #30 KPNA5 (ENSCATG00000034707) #31 FAM162B (ENSCATG00000031733) #32 GPRC6A (ENSCATG00000038791) #33 RFX6 (ENSCATG00000034545) #34 VGLL2 (ENSCATG00000038510) ROS1 (ENSCATG00000021312) ENSCATG00000022159 DCBLD1 (ENSCATG00000033783) Drill MODERN SPECIES 1413 NT5DC1 (ENSMLEG00000035573) TSPYL4 (ENSMLEG00000036698) ENSMLEG00000032841 DSE (ENSMLEG00000028071) #22 CALHM6 (ENSMLEG00000041324) #24 TRAPPC3L (ENSMLEG00000028506) #25 CALHM5 (ENSMLEG00000035316) #26 CALHM4 (ENSMLEG00000032140) #27 RWDD1 (ENSMLEG00000011284) #28 RSPH4A (ENSMLEG00000000631) #29 ZUP1 (ENSMLEG00000033401) #30 KPNA5 (ENSMLEG00000041216) #31 FAM162B (ENSMLEG00000039589) #32 GPRC6A (ENSMLEG00000033168) #33 RFX6 (ENSMLEG00000033029) #34 ENSMLEG00000030294 ROS1 (ENSMLEG00000029082) DCBLD1 (ENSMLEG00000040426) GOPC (ENSMLEG00000026392) Macaca ANCESTRAL SPECIES 9 ENSGT01100000263504.a.b.a.b.a.b.ob ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Pig-tailed macaque MODERN SPECIES 342 FRK (ENSMNEG00000042618) NT5DC1 (ENSMNEG00000029093) COL10A1 (ENSMNEG00000021680) TSPYL4 (ENSMNEG00000028445) ENSMNEG00000031556 DSE (ENSMNEG00000028181) #22 CALHM6 (ENSMNEG00000044903) #24 TRAPPC3L (ENSMNEG00000045331) #25 CALHM5 (ENSMNEG00000044741) #26 CALHM4 (ENSMNEG00000029150) #27 RWDD1 (ENSMNEG00000045094) #28 RSPH4A (ENSMNEG00000038377) #29 ZUP1 (ENSMNEG00000031978) #30 KPNA5 (ENSMNEG00000033544) #31 FAM162B (ENSMNEG00000032267) #32 GPRC6A (ENSMNEG00000035336) #33 RFX6 (ENSMNEG00000037412) #34 VGLL2 (ENSMNEG00000034485) ROS1 (ENSMNEG00000044781) DCBLD1 (ENSMNEG00000045089) GOPC (ENSMNEG00000041231) Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00940000159970 ENSGT00960000190362.E.b ENSGT00950000183105.A.m.a.r.j.a ENSGT00390000012138.a.a.j.b ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Rhesus MODERN SPECIES 14 FAM229B (ENSMMUG00000052965) ENSMMUG00000061978 LAMA4 (ENSMMUG00000013782) ENSMMUG00000061031 ENSMMUG00000001200 MARCKS (ENSMMUG00000008934) HDAC2 (ENSMMUG00000008937) HS3ST5 (ENSMMUG00000050295) ENSMMUG00000057271 FRK (ENSMMUG00000014635) NT5DC1 (ENSMMUG00000014638) COL10A1 (ENSMMUG00000063074) TSPYL4 (ENSMMUG00000014643) ENSMMUG00000054037 TSPYL1 (ENSMMUG00000061148) DSE (ENSMMUG00000007409) #22 TRAPPC3L (ENSMMUG00000007413) #25 CALHM5 (ENSMMUG00000007412) #26 CALHM4 (ENSMMUG00000007414) #27 RWDD1 (ENSMMUG00000007415) #28 RSPH4A (ENSMMUG00000001805) #29 ZUP1 (ENSMMUG00000001806) #30 KPNA5 (ENSMMUG00000048955) #31 FAM162B (ENSMMUG00000050688) #32 GPRC6A (ENSMMUG00000003072) #33 RFX6 (ENSMMUG00000017189) #34 VGLL2 (ENSMMUG00000023737) ROS1 (ENSMMUG00000023738) DCBLD1 (ENSMMUG00000017558) NUS1 (ENSMMUG00000059327) ENSMMUG00000053187 Crab-eating macaque MODERN SPECIES 14 TUBE1 (ENSMFAG00000043188) FAM229B (ENSMFAG00000045226) ENSMFAG00000056511 LAMA4 (ENSMFAG00000037073) ENSMFAG00000064818 ENSMFAG00000031632 ENSMFAG00000018794 ENSMFAG00000052224 HDAC2 (ENSMFAG00000040542) HS3ST5 (ENSMFAG00000061930) ENSMFAG00000063529 ENSMFAG00000047737 FRK (ENSMFAG00000000665) NT5DC1 (ENSMFAG00000038038) COL10A1 (ENSMFAG00000038014) DSE (ENSMFAG00000033289) #22 CALHM6 (ENSMFAG00000041853) #24 TRAPPC3L (ENSMFAG00000055248) #25 CALHM5 (ENSMFAG00000052041) #26 ENSMFAG00000033309 #27 RWDD1 (ENSMFAG00000042598) #28 RSPH4A (ENSMFAG00000038872) #29 ZUP1 (ENSMFAG00000001086) #30 KPNA5 (ENSMFAG00000038991) #31 FAM162B (ENSMFAG00000050195) #32 GPRC6A (ENSMFAG00000037810) #33 RFX6 (ENSMFAG00000000913) #34 ENSMFAG00000039023 ROS1 (ENSMFAG00000001072) DCBLD1 (ENSMFAG00000033065) GOPC (ENSMFAG00000032714) Vervet Monkey MODERN SPECIES 4 CCN6 (ENSCSAG00000015601) TUBE1 (ENSCSAG00000015606) FAM229B (ENSCSAG00000015632) LAMA4 (ENSCSAG00000015643) ENSCSAG00000015668 RFPL4B (ENSCSAG00000018974) MARCKS (ENSCSAG00000015680) HDAC2 (ENSCSAG00000015692) HS3ST5 (ENSCSAG00000015695) FRK (ENSCSAG00000015700) COL10A1 (ENSCSAG00000015703) ENSCSAG00000015707 NT5DC1 (ENSCSAG00000015718) TSPYL4 (ENSCSAG00000018973) TSPYL1 (ENSCSAG00000018972) DSE (ENSCSAG00000015723) #22 CALHM6 (ENSCSAG00000015726) #24 CALHM5 (ENSCSAG00000015732) #26 TRAPPC3L (ENSCSAG00000015735) #25 CALHM4 (ENSCSAG00000015763) #27 RWDD1 (ENSCSAG00000015772) #28 RSPH4A (ENSCSAG00000015777) #29 ZUP1 (ENSCSAG00000015785) #30 KPNA5 (ENSCSAG00000015794) #31 FAM162B (ENSCSAG00000015801) #32 GPRC6A (ENSCSAG00000015844) #33 RFX6 (ENSCSAG00000015856) #34 VGLL2 (ENSCSAG00000015869) ROS1 (ENSCSAG00000015976) DCBLD1 (ENSCSAG00000016039) GOPC (ENSCSAG00000016048) Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00910000148903 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000163194 ENSGT00910000148685 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00390000013354.d.a.a.b ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00910000148903 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00910000147633 ENSGT00940000159970 ENSGT00940000163194 ENSGT00910000148685 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00390000013354.d.a.a.b ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00910000148903 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Pan ANCESTRAL SPECIES 5 ENSGT00390000017996.b ENSGT00910000147633 ENSGT00940000159970 ENSGT00910000148685 ENSGT00940000154281.m.b.a.a.a.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00390000013354.d.a.a.b ENSGT00940000155676.r ENSGT00940000154317.a.b ENSGT00910000148903 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.gb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Chimpanzee MODERN SPECIES 19 ENSPTRG00000047043 ENSPTRG00000045234 ENSPTRG00000049984 MARCKS (ENSPTRG00000018517) HDAC2 (ENSPTRG00000018519) HS3ST5 (ENSPTRG00000018520) ENSPTRG00000051719 FRK (ENSPTRG00000018521) ENSPTRG00000045932 NT5DC1 (ENSPTRG00000018523) COL10A1 (ENSPTRG00000018524) ENSPTRG00000048668 TSPYL4 (ENSPTRG00000023905) ENSPTRG00000051033 TSPYL1 (ENSPTRG00000018528) DSE (ENSPTRG00000018529) #22 TRAPPC3L (ENSPTRG00000050736) #25 CALHM6 (ENSPTRG00000018530) #24 CALHM5 (ENSPTRG00000048761) #26 CALHM4 (ENSPTRG00000018532) #27 RWDD1 (ENSPTRG00000018534) #28 RSPH4A (ENSPTRG00000018535) #29 ZUP1 (ENSPTRG00000018536) #30 KPNA5 (ENSPTRG00000018537) #31 FAM162B (ENSPTRG00000018538) #32 GPRC6A (ENSPTRG00000018539) #33 RFX6 (ENSPTRG00000018540) #34 VGLL2 (ENSPTRG00000018542) ROS1 (ENSPTRG00000018544) DCBLD1 (ENSPTRG00000018545) GOPC (ENSPTRG00000018546) Bonobo MODERN SPECIES 19 ENSPPAG00000019315 ENSPPAG00000030107 ENSPPAG00000007868 ENSPPAG00000043260 HDAC2 (ENSPPAG00000033144) HS3ST5 (ENSPPAG00000026905) ENSPPAG00000037500 FRK (ENSPPAG00000037662) ENSPPAG00000009764 ENSPPAG00000008350 COL10A1 (ENSPPAG00000029466) ENSPPAG00000034902 TSPYL4 (ENSPPAG00000025665) ENSPPAG00000037203 TSPYL1 (ENSPPAG00000010073) DSE (ENSPPAG00000039304) #22 CALHM6 (ENSPPAG00000040382) #24 TRAPPC3L (ENSPPAG00000043671) #25 CALHM5 (ENSPPAG00000039792) #26 ENSPPAG00000019471 #27 RWDD1 (ENSPPAG00000035047) #28 RSPH4A (ENSPPAG00000039243) #29 ZUP1 (ENSPPAG00000026765) #30 KPNA5 (ENSPPAG00000033134) #31 FAM162B (ENSPPAG00000042060) #32 GPRC6A (ENSPPAG00000032903) #33 RFX6 (ENSPPAG00000010113) #34 VGLL2 (ENSPPAG00000043248) ROS1 (ENSPPAG00000040274) DCBLD1 (ENSPPAG00000030913) GOPC (ENSPPAG00000042271) Human MODERN SPECIES 18 TRAF3IP2 (ENSG00000056972) FYN (ENSG00000010810) CCN6 (ENSG00000112761) TUBE1 (ENSG00000074935) FAM229B (ENSG00000203778) LAMA4 (ENSG00000112769) ENSG00000281613 RFPL4B (ENSG00000251258) MARCKS (ENSG00000277443) HDAC2 (ENSG00000196591) HS3ST5 (ENSG00000249853) FRK (ENSG00000111816) NT5DC1 (ENSG00000178425) COL10A1 (ENSG00000123500) TSPYL4 (ENSG00000187189) DSE (ENSG00000111817) #22 TSPYL1 (ENSG00000189241) ENSG00000285446 CALHM6 (ENSG00000188820) #24 TRAPPC3L (ENSG00000173626) #25 CALHM5 (ENSG00000178033) #26 CALHM4 (ENSG00000164451) #27 RWDD1 (ENSG00000111832) #28 RSPH4A (ENSG00000111834) #29 ZUP1 (ENSG00000153975) #30 KPNA5 (ENSG00000196911) #31 FAM162B (ENSG00000183807) #32 GPRC6A (ENSG00000173612) #33 RFX6 (ENSG00000185002) #34 VGLL2 (ENSG00000170162) ROS1 (ENSG00000047936) Gorilla MODERN SPECIES 19 FAM229B (ENSGGOG00000014994) LAMA4 (ENSGGOG00000015003) ENSGGOG00000037491 ENSGGOG00000037075 ENSGGOG00000006107 HDAC2 (ENSGGOG00000005428) HS3ST5 (ENSGGOG00000001108) FRK (ENSGGOG00000034876) ENSGGOG00000039649 NT5DC1 (ENSGGOG00000007465) COL10A1 (ENSGGOG00000023907) ENSGGOG00000037308 TSPYL4 (ENSGGOG00000025875) ENSGGOG00000024360 TSPYL1 (ENSGGOG00000016740) DSE (ENSGGOG00000026746) #22 CALHM6 (ENSGGOG00000001375) #24 TRAPPC3L (ENSGGOG00000036719) #25 CALHM5 (ENSGGOG00000039336) #26 CALHM4 (ENSGGOG00000017144) #27 RWDD1 (ENSGGOG00000026889) #28 ENSGGOG00000016793 #29 ZUP1 (ENSGGOG00000016798) #30 KPNA5 (ENSGGOG00000011906) #31 FAM162B (ENSGGOG00000002045) #32 GPRC6A (ENSGGOG00000001199) #33 RFX6 (ENSGGOG00000006982) #34 VGLL2 (ENSGGOG00000014045) ROS1 (ENSGGOG00000014048) DCBLD1 (ENSGGOG00000001188) GOPC (ENSGGOG00000013555) Orangutan MODERN SPECIES 19 LAMA4 (ENSPPYG00000016934) ENSPPYG00000040581 RFPL4B (ENSPPYG00000016936) ENSPPYG00000016937 MARCKS (ENSPPYG00000035269) ENSPPYG00000016939 HDAC2 (ENSPPYG00000016940) HS3ST5 (ENSPPYG00000039787) FRK (ENSPPYG00000016942) NT5DC1 (ENSPPYG00000016943) COL10A1 (ENSPPYG00000016944) ENSPPYG00000035177 TSPYL4 (ENSPPYG00000040233) ENSPPYG00000035461 TSPYL1 (ENSPPYG00000035346) DSE (ENSPPYG00000016948) #22 CALHM6 (ENSPPYG00000016949) #24 TRAPPC3L (ENSPPYG00000016950) #25 CALHM5 (ENSPPYG00000016951) #26 CALHM4 (ENSPPYG00000016952) #27 RWDD1 (ENSPPYG00000016953) #28 RSPH4A (ENSPPYG00000016954) #29 ZUP1 (ENSPPYG00000016956) #30 KPNA5 (ENSPPYG00000016957) #31 FAM162B (ENSPPYG00000016958) #32 GPRC6A (ENSPPYG00000016959) #33 RFX6 (ENSPPYG00000016960) #34 VGLL2 (ENSPPYG00000016961) ROS1 (ENSPPYG00000016962) DCBLD1 (ENSPPYG00000016963) GOPC (ENSPPYG00000016964) Gibbon DUPLICATION Gibbon MODERN SPECIES 18 TRAF3IP2 (ENSNLEG00000012927) FYN (ENSNLEG00000012937) CCN6 (ENSNLEG00000012965) TUBE1 (ENSNLEG00000012976) FAM229B (ENSNLEG00000012997) LAMA4 (ENSNLEG00000013000) MARCKS (ENSNLEG00000034431) HDAC2 (ENSNLEG00000013058) HS3ST5 (ENSNLEG00000013070) FRK (ENSNLEG00000013075) NT5DC1 (ENSNLEG00000013080) COL10A1 (ENSNLEG00000013102) TSPYL4 (ENSNLEG00000013105) ENSNLEG00000018478 TSPYL1 (ENSNLEG00000019148) DSE (ENSNLEG00000013106) #22 ENSNLEG00000032216 CALHM6 (ENSNLEG00000013120) #24 TRAPPC3L (ENSNLEG00000013121) #25 CALHM5 (ENSNLEG00000013129) #26 CALHM4 (ENSNLEG00000028191) #27 RWDD1 (ENSNLEG00000013133) #28 RSPH4A (ENSNLEG00000013151) #29 ZUP1 (ENSNLEG00000013173) #30 KPNA5 (ENSNLEG00000013209) #31 ENSNLEG00000013253 #32 ENSNLEG00000013257 #33 RFX6 (ENSNLEG00000013258) #34 VGLL2 (ENSNLEG00000013293) ROS1 (ENSNLEG00000013311) DCBLD1 (ENSNLEG00000013410) Gibbon MODERN SPECIES 10 ENSNLEG00000008695 ENSNLEG00000029055 SMARCA2 (ENSNLEG00000008575) DMRT2 (ENSNLEG00000008564) DMRT3 (ENSNLEG00000008556) DMRT1 (ENSNLEG00000008544) ENSNLEG00000018709 KANK1 (ENSNLEG00000008510) DOCK8 (ENSNLEG00000008451) ENSNLEG00000028331 ENSNLEG00000008270 ENSNLEG00000008264 ENSNLEG00000018739 ENSNLEG00000008260 TMEM252 (ENSNLEG00000028670) ENSNLEG00000030468 #22 PABIR1 (ENSNLEG00000034102) PIP5K1B (ENSNLEG00000008227) ENSNLEG00000028086 ENSNLEG00000031982 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00940000159970 ENSGT00390000000970.b.n.a.b ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00910000147939 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676.q ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.eb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Cebidae ANCESTRAL SPECIES 5 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.a ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676.q ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.eb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Cebidae_a ANCESTRAL SPECIES 26 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676.q ENSGT00940000170327 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.eb #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Capuchin MODERN SPECIES 11 ENSCCAG00000001468 FRK (ENSCCAG00000025087) COL10A1 (ENSCCAG00000032758) NT5DC1 (ENSCCAG00000024638) EIF3H (ENSCCAG00000033678) DSE (ENSCCAG00000030876) #22 CALHM6 (ENSCCAG00000029008) #24 CALHM5 (ENSCCAG00000021913) #26 TRAPPC3L (ENSCCAG00000035786) #25 CALHM4 (ENSCCAG00000029702) #27 RWDD1 (ENSCCAG00000027935) #28 RSPH4A (ENSCCAG00000007275) #29 ZUP1 (ENSCCAG00000025061) #30 KPNA5 (ENSCCAG00000022746) #31 FAM162B (ENSCCAG00000031118) #32 GPRC6A (ENSCCAG00000030003) #33 RFX6 (ENSCCAG00000019715) #34 VGLL2 (ENSCCAG00000028036) ROS1 (ENSCCAG00000033956) ENSCCAG00000027081 DCBLD1 (ENSCCAG00000025349) Bolivian squirrel monkey MODERN SPECIES 145 ENSSBOG00000027906 ENSSBOG00000027531 ENSSBOG00000036394 ENSSBOG00000026123 HS3ST5 (ENSSBOG00000025511) ENSSBOG00000025026 FRK (ENSSBOG00000024353) COL10A1 (ENSSBOG00000022558) ENSSBOG00000022050 ENSSBOG00000020743 ENSSBOG00000020332 DSE (ENSSBOG00000019590) #22 CALHM6 (ENSSBOG00000018753) #24 CALHM5 (ENSSBOG00000014712) #26 TRAPPC3L (ENSSBOG00000010873) #25 CALHM4 (ENSSBOG00000006032) #27 RWDD1 (ENSSBOG00000029590) #28 RSPH4A (ENSSBOG00000027685) #29 ZUP1 (ENSSBOG00000023075) #30 KPNA5 (ENSSBOG00000020656) #31 FAM162B (ENSSBOG00000013087) #32 GPRC6A (ENSSBOG00000034356) #33 ENSSBOG00000031250 RFX6 (ENSSBOG00000029327) #34 ENSSBOG00000027243 ROS1 (ENSSBOG00000026173) DCBLD1 (ENSSBOG00000023384) Marmoset MODERN SPECIES 16 CCN6 (ENSCJAG00000004862) TUBE1 (ENSCJAG00000004829) FAM229B (ENSCJAG00000086953) LAMA4 (ENSCJAG00000004703) ENSCJAG00000071609 ENSCJAG00000050876 MARCKS (ENSCJAG00000063272) HDAC2 (ENSCJAG00000004635) HS3ST5 (ENSCJAG00000086455) ENSCJAG00000067023 FRK (ENSCJAG00000004595) TSPYL4 (ENSCJAG00000034803) ENSCJAG00000047367 COL10A1 (ENSCJAG00000004589) TSPYL1 (ENSCJAG00000040079) DSE (ENSCJAG00000004530) #22 CALHM6 (ENSCJAG00000004524) #24 TRAPPC3L (ENSCJAG00000004513) #25 CALHM5 (ENSCJAG00000059277) #26 CALHM4 (ENSCJAG00000004499) #27 ENSCJAG00000004474 #28 RSPH4A (ENSCJAG00000004455) #29 ZUP1 (ENSCJAG00000004437) #30 KPNA5 (ENSCJAG00000004394) #31 ENSCJAG00000072141 FAM162B (ENSCJAG00000055731) #32 GPRC6A (ENSCJAG00000004373) #33 RFX6 (ENSCJAG00000004349) #34 VGLL2 (ENSCJAG00000004345) ROS1 (ENSCJAG00000004286) ENSCJAG00000070188 Mas night monkey MODERN SPECIES 1107 ENSANAG00000018810 MARCKS (ENSANAG00000023603) ENSANAG00000004036 HDAC2 (ENSANAG00000034693) ENSANAG00000018971 HS3ST5 (ENSANAG00000026473) FRK (ENSANAG00000035872) COL10A1 (ENSANAG00000028479) ENSANAG00000031391 TSPYL1 (ENSANAG00000022346) ENSANAG00000036796 DSE (ENSANAG00000038310) #22 CALHM6 (ENSANAG00000032722) #24 CALHM5 (ENSANAG00000001421) #26 ENSANAG00000030183 TRAPPC3L (ENSANAG00000026394) #25 CALHM4 (ENSANAG00000022923) #27 RWDD1 (ENSANAG00000030086) #28 RSPH4A (ENSANAG00000020519) #29 ZUP1 (ENSANAG00000021756) #30 KPNA5 (ENSANAG00000009920) #31 FAM162B (ENSANAG00000023673) #32 GPRC6A (ENSANAG00000028734) #33 ENSANAG00000020549 RFX6 (ENSANAG00000035610) #34 VGLL2 (ENSANAG00000033765) ROS1 (ENSANAG00000029743) Tarsier MODERN SPECIES 3809 FRK (ENSTSYG00000006421) ENSTSYG00000012714 COL10A1 (ENSTSYG00000035031) DSE (ENSTSYG00000009566) #22 FAM26F (ENSTSYG00000036009) #24 TRAPPC3L (ENSTSYG00000006716) #25 FAM26E (ENSTSYG00000006740) #26 FAM26D (ENSTSYG00000006743) #27 RWDD1 (ENSTSYG00000008636) #28 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00940000161944.a.a ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Mouse lemur MODERN SPECIES 28 REV3L (ENSMICG00000030163) ENSMICG00000008708 ENSMICG00000042685 FYN (ENSMICG00000008716) CCN6 (ENSMICG00000008735) TUBE1 (ENSMICG00000047219) FAM229B (ENSMICG00000043291) LAMA4 (ENSMICG00000008751) MARCKS (ENSMICG00000026883) HDAC2 (ENSMICG00000000261) HS3ST5 (ENSMICG00000027940) FRK (ENSMICG00000003603) ENSMICG00000046212 NT5DC1 (ENSMICG00000003606) TSPYL1 (ENSMICG00000044487) DSE (ENSMICG00000008111) #22 CALHM6 (ENSMICG00000032074) #24 CALHM5 (ENSMICG00000008119) #26 TRAPPC3L (ENSMICG00000008115) #25 CALHM4 (ENSMICG00000008123) #27 ENSMICG00000036368 #28 ENSMICG00000032805 MMUT (ENSMICG00000008076) CENPQ (ENSMICG00000042405) GLYATL3 (ENSMICG00000002636) ENSMICG00000046680 RHAG (ENSMICG00000008366) CRISP2 (ENSMICG00000014964) CRISP3 (ENSMICG00000002617) CRISP1 (ENSMICG00000002786) DEFB114 (ENSMICG00000044264) Lemuriformes_a ANCESTRAL SPECIES 63 ENSGT00940000161944.a.a ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Coquerels sifaka MODERN SPECIES 445 FRK (ENSPCOG00000016754) ENSPCOG00000017572 NT5DC1 (ENSPCOG00000019513) TSPYL1 (ENSPCOG00000020616) DSE (ENSPCOG00000017942) #22 CALHM6 (ENSPCOG00000015099) #24 CALHM5 (ENSPCOG00000020027) #26 TRAPPC3L (ENSPCOG00000018449) #25 CALHM4 (ENSPCOG00000027369) #27 RSPH4A (ENSPCOG00000006824) #29 ZUP1 (ENSPCOG00000021558) #30 KPNA5 (ENSPCOG00000016943) #31 GPRC6A (ENSPCOG00000013226) #33 ENSPCOG00000024330 RFX6 (ENSPCOG00000024904) #34 VGLL2 (ENSPCOG00000017437) ROS1 (ENSPCOG00000018293) DCBLD1 (ENSPCOG00000023692) GOPC (ENSPCOG00000028025) ENSPCOG00000019234 Greater bamboo lemur MODERN SPECIES 117 CCN6 (ENSPSMG00000024981) TUBE1 (ENSPSMG00000025000) FAM229B (ENSPSMG00000025004) LAMA4 (ENSPSMG00000025055) ENSPSMG00000025088 MARCKS (ENSPSMG00000025094) ENSPSMG00000025097 HDAC2 (ENSPSMG00000025136) HS3ST5 (ENSPSMG00000025147) FRK (ENSPSMG00000025161) NT5DC1 (ENSPSMG00000025168) ENSPSMG00000025170 TSPYL4 (ENSPSMG00000025171) ENSPSMG00000025176 ENSPSMG00000025178 DSE (ENSPSMG00000025197) #22 CALHM6 (ENSPSMG00000025201) #24 TRAPPC3L (ENSPSMG00000025203) #25 CALHM5 (ENSPSMG00000025204) #26 CALHM4 (ENSPSMG00000025205) #27 RWDD1 (ENSPSMG00000025211) #28 ENSPSMG00000025216 ENSPSMG00000025223 RSPH4A (ENSPSMG00000025239) #29 ZUP1 (ENSPSMG00000025258) #30 KPNA5 (ENSPSMG00000025274) #31 FAM162B (ENSPSMG00000025283) #32 GPRC6A (ENSPSMG00000025285) #33 RFX6 (ENSPSMG00000025293) #34 Bushbaby MODERN SPECIES 117 FAM229B (ENSOGAG00000025096) ENSOGAG00000033832 ENSOGAG00000011203 LAMA4 (ENSOGAG00000011205) ENSOGAG00000031703 ENSOGAG00000025253 ENSOGAG00000028073 HDAC2 (ENSOGAG00000011016) HS3ST5 (ENSOGAG00000011023) FRK (ENSOGAG00000009140) NT5DC1 (ENSOGAG00000009142) COL10A1 (ENSOGAG00000024717) TSPYL4 (ENSOGAG00000031495) TSPYL1 (ENSOGAG00000001189) ENSOGAG00000025070 DSE (ENSOGAG00000001191) #22 CALHM6 (ENSOGAG00000032372) #24 TRAPPC3L (ENSOGAG00000014677) #25 CALHM5 (ENSOGAG00000014679) #26 CALHM4 (ENSOGAG00000014682) #27 RWDD1 (ENSOGAG00000014683) #28 ENSOGAG00000025916 ENSOGAG00000030595 RSPH4A (ENSOGAG00000011917) #29 ZUP1 (ENSOGAG00000011921) #30 KPNA5 (ENSOGAG00000011924) #31 FAM162B (ENSOGAG00000011931) #32 GPRC6A (ENSOGAG00000011933) #33 RFX6 (ENSOGAG00000011937) #34 VGLL2 (ENSOGAG00000031570) ROS1 (ENSOGAG00000005027) Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Tree shrew MODERN SPECIES 4335 DSE (ENSTBEG00000009310) #22 CALHM6 (ENSTBEG00000009471) #24 TRAPPC3L (ENSTBEG00000001430) #25 CALHM5 (ENSTBEG00000001977) #26 CALHM4 (ENSTBEG00000002287) #27 RWDD1 (ENSTBEG00000002543) #28 Glires ANCESTRAL SPECIES 5 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Rodentia ANCESTRAL SPECIES 6 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Rodentia_B ANCESTRAL SPECIES 18 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Myomorpha ANCESTRAL SPECIES 21 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Muroidea ANCESTRAL SPECIES 22 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 Cricetidae ANCESTRAL SPECIES 11 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 Cricetidae_B ANCESTRAL SPECIES 21 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Northern American deer mouse MODERN SPECIES 7 Traf3ip2 (ENSPEMG00000029352) Fyn (ENSPEMG00000019599) Ccn6 (ENSPEMG00000019642) Tube1 (ENSPEMG00000019866) Fam229b (ENSPEMG00000029065) Lama4 (ENSPEMG00000019628) ENSPEMG00000014821 Hdac2 (ENSPEMG00000019358) Hs3st5 (ENSPEMG00000027903) ENSPEMG00000027759 Frk (ENSPEMG00000027385) Nt5dc1 (ENSPEMG00000020069) Col10a1 (ENSPEMG00000019392) Tspyl4 (ENSPEMG00000031222) Tspyl1 (ENSPEMG00000019621) Dse (ENSPEMG00000019781) #22 Calhm6 (ENSPEMG00000019812) #24 Trappc3l (ENSPEMG00000019941) #25 Calhm5 (ENSPEMG00000019478) #26 Calhm4 (ENSPEMG00000017719) #27 Rwdd1 (ENSPEMG00000000119) #28 ENSPEMG00000010482 Rsph4a (ENSPEMG00000015392) #29 Zup1 (ENSPEMG00000019963) #30 ENSPEMG00000021071 #31 Fam162b (ENSPEMG00000022270) #32 Gprc6a (ENSPEMG00000021921) #33 Rfx6 (ENSPEMG00000013570) #34 ENSPEMG00000028021 Vgll2 (ENSPEMG00000011624) Ros1 (ENSPEMG00000018962) Prairie vole MODERN SPECIES 358 Fyn (ENSMOCG00000018772) Ccn6 (ENSMOCG00000014379) Tube1 (ENSMOCG00000012627) Fam229b (ENSMOCG00000011348) Lama4 (ENSMOCG00000007325) ENSMOCG00000014007 Marcks (ENSMOCG00000011957) ENSMOCG00000007938 Hs3st5 (ENSMOCG00000006907) ENSMOCG00000021869 Frk (ENSMOCG00000011544) ENSMOCG00000018965 Nt5dc1 (ENSMOCG00000011487) Tspyl4 (ENSMOCG00000006852) Tspyl1 (ENSMOCG00000007884) Dse (ENSMOCG00000021598) #22 Calhm6 (ENSMOCG00000017769) #24 Calhm5 (ENSMOCG00000011633) #26 Trappc3l (ENSMOCG00000011302) #25 Calhm4 (ENSMOCG00000004418) #27 ENSMOCG00000002869 #28 ENSMOCG00000021945 Grik2 (ENSMOCG00000022205) Ascc3 (ENSMOCG00000004549) Sim1 (ENSMOCG00000017754) ENSMOCG00000008070 Ppp1r14c (ENSMOCG00000002551) Iyd (ENSMOCG00000012475) Plekhg1 (ENSMOCG00000006027) Mthfd1l (ENSMOCG00000011918) ENSMOCG00000019373 Cricetinae ANCESTRAL SPECIES 7 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 Chinese hamster chok1gshd MODERN SPECIES 160 ENSCGRG00001012299 ENSCGRG00001014335 Ccn6 (ENSCGRG00001011722) Tube1 (ENSCGRG00001012631) Fam229b (ENSCGRG00001012149) Lama4 (ENSCGRG00001023009) Marcks (ENSCGRG00001020371) Hdac2 (ENSCGRG00001016612) Hs3st5 (ENSCGRG00001015101) ENSCGRG00001014662 Frk (ENSCGRG00001012098) Col10a1 (ENSCGRG00001011438) Nt5dc1 (ENSCGRG00001019057) Tspyl4 (ENSCGRG00001015452) Tspyl1 (ENSCGRG00001016055) Dse (ENSCGRG00001016755) #22 Calhm6 (ENSCGRG00001016166) #24 Calhm5 (ENSCGRG00001015860) #26 Trappc3l (ENSCGRG00001001357) #25 Calhm4 (ENSCGRG00001000585) #27 Rwdd1 (ENSCGRG00001000262) #28 ENSCGRG00001022958 ENSCGRG00001022688 Rsph4a (ENSCGRG00001022255) #29 Zup1 (ENSCGRG00001019649) #30 ENSCGRG00001017023 #31 Fam162b (ENSCGRG00001013690) #32 Gprc6a (ENSCGRG00001019351) #33 Rfx6 (ENSCGRG00001013519) #34 ENSCGRG00001016423 Vgll2 (ENSCGRG00001012605) Golden Hamster MODERN SPECIES 655 ENSMAUG00000019138 Fyn (ENSMAUG00000008178) Ccn6 (ENSMAUG00000021485) Tube1 (ENSMAUG00000008915) Fam229b (ENSMAUG00000019053) Lama4 (ENSMAUG00000008791) Marcks (ENSMAUG00000014455) ENSMAUG00000006781 Hdac2 (ENSMAUG00000020410) Hs3st5 (ENSMAUG00000011520) Frk (ENSMAUG00000011561) Nt5dc1 (ENSMAUG00000018298) Col10a1 (ENSMAUG00000021181) Tspyl4 (ENSMAUG00000007306) Tspyl1 (ENSMAUG00000018330) Dse (ENSMAUG00000020240) #22 Calhm6 (ENSMAUG00000002308) #24 Trappc3l (ENSMAUG00000004214) #25 Calhm5 (ENSMAUG00000014804) #26 Calhm4 (ENSMAUG00000020546) #27 Rwdd1 (ENSMAUG00000001504) #28 ENSMAUG00000009333 Rsph4a (ENSMAUG00000009247) #29 Zup1 (ENSMAUG00000012807) #30 ENSMAUG00000009856 #31 Fam162b (ENSMAUG00000012733) #32 Rfx6 (ENSMAUG00000002997) #34 ENSMAUG00000007444 Vgll2 (ENSMAUG00000019922) Ros1 (ENSMAUG00000016942) Dcbld1 (ENSMAUG00000010738) Murinae ANCESTRAL SPECIES 36 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000003880.b.b #25 Mus ANCESTRAL SPECIES 15 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT00500000044869.a.a #29 ENSGT00940000156772 ENSGT00940000157632 ENSGT00510000049207 ENSGT00940000160565 ENSGT00730000111285 ENSGT00940000159202 ENSGT00390000009937 ENSGT00940000160636 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT00500000044869.a.a #29 ENSGT00940000156772.ab ENSGT00940000157632 ENSGT00510000049207 ENSGT00940000160565 ENSGT00730000111285 ENSGT00940000159202 ENSGT00390000009937 ENSGT00940000160636 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT00500000044869.a.a #29 ENSGT00940000156772.ab ENSGT00940000156772.`b ENSGT00940000157632 ENSGT00510000049207 ENSGT00940000160565 ENSGT00730000111285 ENSGT00940000159202 ENSGT00390000009937 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000003880.b.b #25 ENSGT00390000008232 #30 ENSGT00500000044869.a.a #29 ENSGT00940000156772.ab ENSGT00940000156772.`b ENSGT00940000157632 ENSGT00510000049207 ENSGT00940000160565 ENSGT00730000111285 ENSGT00940000159202 ENSGT00390000009937 Steppe mouse MODERN SPECIES 2637 Frk (ENSMSIG00000029824) Col10a1 (ENSMSIG00000029818) Nt5dc1 (ENSMSIG00000029807) Tspyl4 (ENSMSIG00000029805) Tspyl1 (ENSMSIG00000029804) Dse (ENSMSIG00000029795) #22 Calhm6 (ENSMSIG00000029790) #24 Calhm5 (ENSMSIG00000029788) #26 Trappc3l (ENSMSIG00000029785) #25 Calhm4 (ENSMSIG00000029784) #27 ENSMSIG00000029781 #28 spretus MODERN SPECIES 1 Traf3ip2 (MGP_SPRETEiJ_G0016056) Fyn (MGP_SPRETEiJ_G0016055) Ccn6 (MGP_SPRETEiJ_G0016054) Tube1 (MGP_SPRETEiJ_G0016053) Fam229b (MGP_SPRETEiJ_G0016052) Lama4 (MGP_SPRETEiJ_G0016051) Rfpl4b (MGP_SPRETEiJ_G0016050) Marcks (MGP_SPRETEiJ_G0016049) Hdac2 (MGP_SPRETEiJ_G0016048) Hs3st5 (MGP_SPRETEiJ_G0016047) Frk (MGP_SPRETEiJ_G0016046) Col10a1 (MGP_SPRETEiJ_G0016045) Nt5dc1 (MGP_SPRETEiJ_G0016044) Tspyl4 (MGP_SPRETEiJ_G0016043) Tspyl1 (MGP_SPRETEiJ_G0016042) Dse (MGP_SPRETEiJ_G0016041) #22 Calhm6 (MGP_SPRETEiJ_G0016040) #24 Calhm5 (MGP_SPRETEiJ_G0016039) #26 Calhm4 (MGP_SPRETEiJ_G0016038) #27 Trappc3l (MGP_SPRETEiJ_G0016037) #25 Rwdd1 (MGP_SPRETEiJ_G0016036) #28 MGP_SPRETEiJ_G0016035 Zup1 (MGP_SPRETEiJ_G0016034) #30 Rsph4a (MGP_SPRETEiJ_G0016033) #29 Sult3a1 (MGP_SPRETEiJ_G0016032) MGP_SPRETEiJ_G0016031 Clvs2 (MGP_SPRETEiJ_G0016030) Trdn (MGP_SPRETEiJ_G0016029) Nkain2 (MGP_SPRETEiJ_G0016028) Rnf217 (MGP_SPRETEiJ_G0016027) Tpd52l1 (MGP_SPRETEiJ_G0016026) Mouse MODERN SPECIES 1 Fyn (ENSMUSG00000019843) Ccn6 (ENSMUSG00000062074) Tube1 (ENSMUSG00000019845) Fam229b (ENSMUSG00000051736) Lama4 (ENSMUSG00000019846) Rfpl4b (ENSMUSG00000094311) Marcks (ENSMUSG00000069662) Hdac2 (ENSMUSG00000019777) Hs3st5 (ENSMUSG00000044499) Amd2 (ENSMUSG00000063953) Frk (ENSMUSG00000019779) Col10a1 (ENSMUSG00000039462) Tspyl4 (ENSMUSG00000039485) Nt5dc1 (ENSMUSG00000039480) Tspyl1 (ENSMUSG00000047514) Dse (ENSMUSG00000039497) #22 Calhm6 (ENSMUSG00000046031) #24 Calhm5 (ENSMUSG00000049872) #26 Calhm4 (ENSMUSG00000039508) #27 Trappc3l (ENSMUSG00000071340) #25 Rwdd1 (ENSMUSG00000019782) #28 Zup1 (ENSMUSG00000039531) #30 Rsph4a (ENSMUSG00000039552) #29 Sult3a1 (ENSMUSG00000069668) Sult3a2 (ENSMUSG00000090298) Clvs2 (ENSMUSG00000019785) Trdn (ENSMUSG00000019787) Nkain2 (ENSMUSG00000069670) Rnf217 (ENSMUSG00000063760) Tpd52l1 (ENSMUSG00000000296) Hddc2 (ENSMUSG00000000295) Ryukyu mouse MODERN SPECIES 1 Traf3ip2 (MGP_CAROLIEiJ_G0015247) Fyn (MGP_CAROLIEiJ_G0015246) Ccn6 (MGP_CAROLIEiJ_G0015245) Tube1 (MGP_CAROLIEiJ_G0015244) Fam229b (MGP_CAROLIEiJ_G0015243) Lama4 (MGP_CAROLIEiJ_G0015242) Rfpl4b (MGP_CAROLIEiJ_G0015241) Marcks (MGP_CAROLIEiJ_G0015240) Hdac2 (MGP_CAROLIEiJ_G0015239) Hs3st5 (MGP_CAROLIEiJ_G0015238) Frk (MGP_CAROLIEiJ_G0015237) Col10a1 (MGP_CAROLIEiJ_G0015236) Tspyl4 (MGP_CAROLIEiJ_G0015235) Nt5dc1 (MGP_CAROLIEiJ_G0015234) Tspyl1 (MGP_CAROLIEiJ_G0015233) Dse (MGP_CAROLIEiJ_G0015232) #22 Calhm6 (MGP_CAROLIEiJ_G0015231) #24 Calhm5 (MGP_CAROLIEiJ_G0015230) #26 Calhm4 (MGP_CAROLIEiJ_G0015229) #27 Trappc3l (MGP_CAROLIEiJ_G0015228) #25 Rwdd1 (MGP_CAROLIEiJ_G0015227) #28 MGP_CAROLIEiJ_G0015226 Zup1 (MGP_CAROLIEiJ_G0015225) #30 Rsph4a (MGP_CAROLIEiJ_G0015224) #29 MGP_CAROLIEiJ_G0015223 Sult3a1 (MGP_CAROLIEiJ_G0015222) Clvs2 (MGP_CAROLIEiJ_G0015221) Trdn (MGP_CAROLIEiJ_G0015220) Nkain2 (MGP_CAROLIEiJ_G0015219) Rnf217 (MGP_CAROLIEiJ_G0015218) Tpd52l1 (MGP_CAROLIEiJ_G0015217) Shrew mouse MODERN SPECIES 22 Traf3ip2 (MGP_PahariEiJ_G0030664) Fyn (MGP_PahariEiJ_G0030663) Ccn6 (MGP_PahariEiJ_G0030662) Tube1 (MGP_PahariEiJ_G0030661) Fam229b (MGP_PahariEiJ_G0030660) Lama4 (MGP_PahariEiJ_G0030659) Rfpl4b (MGP_PahariEiJ_G0030658) Marcks (MGP_PahariEiJ_G0030657) Hdac2 (MGP_PahariEiJ_G0030656) Hs3st5 (MGP_PahariEiJ_G0030655) Frk (MGP_PahariEiJ_G0030654) Col10a1 (MGP_PahariEiJ_G0030653) Tspyl4 (MGP_PahariEiJ_G0030652) Nt5dc1 (MGP_PahariEiJ_G0030651) Tspyl1 (MGP_PahariEiJ_G0030650) Dse (MGP_PahariEiJ_G0030649) #22 MGP_PahariEiJ_G0030648 #24 Calhm5 (MGP_PahariEiJ_G0030647) #26 Calhm4 (MGP_PahariEiJ_G0030646) #27 Trappc3l (MGP_PahariEiJ_G0030645) #25 Rwdd1 (MGP_PahariEiJ_G0030644) #28 MGP_PahariEiJ_G0030643 Zup1 (MGP_PahariEiJ_G0030642) #30 Rsph4a (MGP_PahariEiJ_G0030641) #29 MGP_PahariEiJ_G0030640 Rat MODERN SPECIES 12 Oit3 (ENSRNOG00000046365) Pla2g12b (ENSRNOG00000046619) P4ha1 (ENSRNOG00000050655) Snrpd2l (ENSRNOG00000048758) Sowahc (ENSRNOG00000064749) Septin10 (ENSRNOG00000049507) ENSRNOG00000068135 Sh3rf3 (ENSRNOG00000046791) Edar (ENSRNOG00000028598) Ccdc138 (ENSRNOG00000028581) ENSRNOG00000064170 Ranbp2 (ENSRNOG00000000796) Lims1 (ENSRNOG00000037765) Gcc2 (ENSRNOG00000000823) ENSRNOG00000069923 Dse (ENSRNOG00000000824) #22 Calhm6 (ENSRNOG00000037757) #24 Calhm5 (ENSRNOG00000000825) #26 Calhm4 (ENSRNOG00000000580) #27 Trappc3l (ENSRNOG00000031290) #25 Rwdd1 (ENSRNOG00000042916) #28 Tet1 (ENSRNOG00000000277) LOC103694416 (ENSRNOG00000051063) Dna2 (ENSRNOG00000000387) Rufy2 (ENSRNOG00000065563) Hnrnph3 (ENSRNOG00000048193) Ak6 (ENSRNOG00000026813) Pbld2 (ENSRNOG00000069854) Pbld1 (ENSRNOG00000000386) Atoh7 (ENSRNOG00000000384) Mypn (ENSRNOG00000000383) Upper Galilee mountains blind mole rat MODERN SPECIES 1622 Frk (ENSNGAG00000023884) ENSNGAG00000019635 Nt5dc1 (ENSNGAG00000017414) Tspyl4 (ENSNGAG00000013340) Tspyl1 (ENSNGAG00000002957) Dse (ENSNGAG00000023284) #22 Calhm6 (ENSNGAG00000022608) #24 Calhm5 (ENSNGAG00000021647) #26 Trappc3l (ENSNGAG00000020430) #25 Calhm4 (ENSNGAG00000011668) #27 ENSNGAG00000022138 #28 ENSNGAG00000021507 ENSNGAG00000023845 ENSNGAG00000023286 Rsph4a (ENSNGAG00000022773) #29 Zup1 (ENSNGAG00000020874) #30 Lesser Egyptian jerboa MODERN SPECIES 78 ENSJJAG00000017239 ENSJJAG00000020576 ENSJJAG00000024023 Rev3l (ENSJJAG00000000424) ENSJJAG00000003050 Fyn (ENSJJAG00000019918) Lama4 (ENSJJAG00000015844) ENSJJAG00000024370 Hdac2 (ENSJJAG00000006043) Hs3st5 (ENSJJAG00000016015) ENSJJAG00000018330 Frk (ENSJJAG00000012534) ENSJJAG00000021831 Tspyl4 (ENSJJAG00000003740) Tspyl1 (ENSJJAG00000004543) Dse (ENSJJAG00000009728) #22 Calhm5 (ENSJJAG00000000846) #26 Calhm4 (ENSJJAG00000015260) #27 ENSJJAG00000020421 #28 Kangaroo rat MODERN SPECIES 476 ENSDORG00000002516 ENSDORG00000006922 Rev3l (ENSDORG00000000703) ENSDORG00000010688 Fyn (ENSDORG00000016706) Ccn6 (ENSDORG00000012026) ENSDORG00000012029 Fam229b (ENSDORG00000012031) Lama4 (ENSDORG00000012032) Hdac2 (ENSDORG00000013317) Hs3st5 (ENSDORG00000028438) Frk (ENSDORG00000000702) ENSDORG00000010312 Nt5dc1 (ENSDORG00000010307) Tspyl4 (ENSDORG00000027297) Dse (ENSDORG00000012764) #22 Calhm6 (ENSDORG00000012765) #24 Calhm5 (ENSDORG00000012771) #26 Trappc3l (ENSDORG00000012769) #25 Calhm4 (ENSDORG00000012772) #27 Rwdd1 (ENSDORG00000012373) #28 ENSDORG00000025806 Rsph4a (ENSDORG00000003944) #29 Zup1 (ENSDORG00000003947) #30 ENSDORG00000015949 #31 Fam162b (ENSDORG00000024159) #32 Gprc6a (ENSDORG00000013585) #33 Rfx6 (ENSDORG00000013591) #34 Vgll2 (ENSDORG00000016343) Ros1 (ENSDORG00000007167) Dcbld1 (ENSDORG00000015776) Rodentia_A ANCESTRAL SPECIES 8 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015 ENSGT01050000247848 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Hystricomorpha ANCESTRAL SPECIES 41 ENSGT00530000063320.B.u ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 Hystricomorpha_a ANCESTRAL SPECIES 46 ENSGT00530000063320.B.u.c ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 Hystricomorpha_b ANCESTRAL SPECIES 121 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 Long-tailed chinchilla MODERN SPECIES 233 CCN6 (ENSCLAG00000000109) TUBE1 (ENSCLAG00000000067) FAM229B (ENSCLAG00000000365) LAMA4 (ENSCLAG00000000130) ENSCLAG00000000080 ENSCLAG00000000058 ENSCLAG00000017382 ENSCLAG00000000824 HDAC2 (ENSCLAG00000000749) ENSCLAG00000000682 HS3ST5 (ENSCLAG00000000666) FRK (ENSCLAG00000000628) ENSCLAG00000000565 NT5DC1 (ENSCLAG00000000283) DSE (ENSCLAG00000000219) #22 CALHM5 (ENSCLAG00000000210) #26 TRAPPC3L (ENSCLAG00000000221) #25 CALHM4 (ENSCLAG00000000213) #27 ENSCLAG00000000206 #28 Degu MODERN SPECIES 424 ENSODEG00000000400 COL10A1 (ENSODEG00000000467) DSE (ENSODEG00000000261) #22 CALHM6 (ENSODEG00000000335) #24 Guinea pig MODERN SPECIES 58 ENSCPOG00000000094 REV3L (ENSCPOG00000024631) TRAF3IP2 (ENSCPOG00000012814) FYN (ENSCPOG00000012822) CCN6 (ENSCPOG00000004828) TUBE1 (ENSCPOG00000004829) FAM229B (ENSCPOG00000031930) LAMA4 (ENSCPOG00000006325) HDAC2 (ENSCPOG00000014344) HS3ST5 (ENSCPOG00000031109) FRK (ENSCPOG00000006954) ENSCPOG00000009416 NT5DC1 (ENSCPOG00000009411) TSPYL1 (ENSCPOG00000022929) ENSCPOG00000035087 DSE (ENSCPOG00000003402) #22 CALHM5 (ENSCPOG00000036158) #26 TRAPPC3L (ENSCPOG00000012848) #25 CALHM4 (ENSCPOG00000012855) #27 RWDD1 (ENSCPOG00000038110) #28 ENSCPOG00000004731 SMOC2 (ENSCPOG00000008023) THBS2 (ENSCPOG00000027034) WDR27 (ENSCPOG00000011113) C6orf120 (ENSCPOG00000027368) PHF10 (ENSCPOG00000022409) DYNLT2 (ENSCPOG00000037938) ERMARD (ENSCPOG00000011581) DLL1 (ENSCPOG00000024133) FAM120B (ENSCPOG00000032998) PSMB1 (ENSCPOG00000001187) Naked mole-rat female MODERN SPECIES 30 STK25 (ENSHGLG00000015089) BOK (ENSHGLG00000015101) THAP4 (ENSHGLG00000015125) ATG4B (ENSHGLG00000018630) DTYMK (ENSHGLG00000018717) ING5 (ENSHGLG00000037490) D2HGDH (ENSHGLG00000003119) GAL3ST2 (ENSHGLG00000003311) NEU4 (ENSHGLG00000003691) PDCD1 (ENSHGLG00000032677) ENSHGLG00000004109 ENSHGLG00000038816 ENSHGLG00000000610 ENSHGLG00000041212 TSPYL4 (ENSHGLG00000036673) DSE (ENSHGLG00000041966) #22 CALHM6 (ENSHGLG00000033792) #24 TRAPPC3L (ENSHGLG00000002142) #25 CALHM5 (ENSHGLG00000035655) #26 CALHM4 (ENSHGLG00000002679) #27 ENSHGLG00000002331 #28 ENSHGLG00000019728 ENSHGLG00000019671 ENSHGLG00000019674 ENSHGLG00000000164 ENSHGLG00000050432 ENSHGLG00000002101 ENSHGLG00000017890 ENSHGLG00000047673 ENSHGLG00000050169 ENSHGLG00000034017 Sciuridae ANCESTRAL SPECIES 1 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015 ENSGT01050000247848 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.w ENSGT00940000156772.x ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Marmotini ANCESTRAL SPECIES 11 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00900000143015.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.w ENSGT00940000156772.x ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Marmotini_b ANCESTRAL SPECIES 230 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.w Arctic ground squirrel MODERN SPECIES 641 FRK (ENSUPAG00010000456) ENSUPAG00010000440 NT5DC1 (ENSUPAG00010000422) TSPYL4 (ENSUPAG00010000416) DSE (ENSUPAG00010000398) #22 CALHM6 (ENSUPAG00010000391) #24 CALHM5 (ENSUPAG00010000386) #26 TRAPPC3L (ENSUPAG00010000373) #25 CALHM4 (ENSUPAG00010000356) #27 RWDD1 (ENSUPAG00010000317) #28 ENSUPAG00010000296 Squirrel MODERN SPECIES 424 FRK (ENSSTOG00000010404) NT5DC1 (ENSSTOG00000008916) COL10A1 (ENSSTOG00000008935) TSPYL4 (ENSSTOG00000008940) TSPYL1 (ENSSTOG00000028666) DSE (ENSSTOG00000013912) #22 CALHM6 (ENSSTOG00000006731) #24 TRAPPC3L (ENSSTOG00000032320) #25 CALHM5 (ENSSTOG00000006744) #26 CALHM4 (ENSSTOG00000001157) #27 RWDD1 (ENSSTOG00000020231) #28 Alpin marmot MODERN SPECIES 2 REV3L (ENSMMMG00000014848) ENSMMMG00000014893 TRAF3IP2 (ENSMMMG00000014896) FYN (ENSMMMG00000014912) CCN6 (ENSMMMG00000015161) TUBE1 (ENSMMMG00000015165) FAM229B (ENSMMMG00000015179) LAMA4 (ENSMMMG00000015194) ENSMMMG00000015261 HDAC2 (ENSMMMG00000015264) HS3ST5 (ENSMMMG00000015290) FRK (ENSMMMG00000015306) ENSMMMG00000015316 ENSMMMG00000015321 TSPYL4 (ENSMMMG00000015326) DSE (ENSMMMG00000015341) #22 CALHM6 (ENSMMMG00000015349) #24 CALHM5 (ENSMMMG00000015357) #26 CALHM4 (ENSMMMG00000015364) #27 RWDD1 (ENSMMMG00000015368) #28 ENSMMMG00000015375 ENSMMMG00000015383 ENSMMMG00000015402 RSPH4A (ENSMMMG00000015424) #29 ZUP1 (ENSMMMG00000015434) #30 KPNA5 (ENSMMMG00000015469) #31 FAM162B (ENSMMMG00000015589) #32 GPRC6A (ENSMMMG00000015597) #33 RFX6 (ENSMMMG00000015641) #34 VGLL2 (ENSMMMG00000015787) ROS1 (ENSMMMG00000015799) Eurasian red squirrel MODERN SPECIES 16 FAM229B (ENSSVLG00005010404) LAMA4 (ENSSVLG00005010349) ENSSVLG00005010294 MARCKS (ENSSVLG00005010232) ENSSVLG00005010204 HDAC2 (ENSSVLG00005010140) ENSSVLG00005010101 HS3ST5 (ENSSVLG00005010072) ENSSVLG00005010037 ENSSVLG00005010009 FRK (ENSSVLG00005009937) COL10A1 (ENSSVLG00005009901) NT5DC1 (ENSSVLG00005009872) TSPYL4 (ENSSVLG00005009852) TSPYL1 (ENSSVLG00005009835) DSE (ENSSVLG00005009768) #22 CALHM6 (ENSSVLG00005009719) #24 CALHM5 (ENSSVLG00005009693) #26 TRAPPC3L (ENSSVLG00005009643) #25 CALHM4 (ENSSVLG00005009602) #27 ENSSVLG00005009556 #28 ENSSVLG00005009507 RSPH4A (ENSSVLG00005009389) #29 ZUP1 (ENSSVLG00005009321) #30 KPNA5 (ENSSVLG00005009288) #31 FAM162B (ENSSVLG00005009241) #32 GPRC6A (ENSSVLG00005009132) #33 RFX6 (ENSSVLG00005008988) #34 VGLL2 (ENSSVLG00005008910) ROS1 (ENSSVLG00005008411) GOPC (ENSSVLG00005008267) Lagomorpha ANCESTRAL SPECIES 108 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000166162 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT01050000244950.a.a.b #31 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Rabbit MODERN SPECIES 3 MARCKS (ENSOCUG00000007028) HDAC2 (ENSOCUG00000000598) ENSOCUG00000036084 HS3ST5 (ENSOCUG00000002744) ENSOCUG00000024678 ENSOCUG00000031905 ENSOCUG00000032491 ENSOCUG00000037887 FRK (ENSOCUG00000001181) NT5DC1 (ENSOCUG00000001184) ENSOCUG00000001188 ENSOCUG00000022880 TSPYL4 (ENSOCUG00000016118) ENSOCUG00000015797 ENSOCUG00000032572 DSE (ENSOCUG00000007344) #22 CALHM6 (ENSOCUG00000029266) #24 ENSOCUG00000030465 ENSOCUG00000035395 ENSOCUG00000032983 TRAPPC3L (ENSOCUG00000002656) #25 CALHM5 (ENSOCUG00000002660) #26 CALHM4 (ENSOCUG00000025315) #27 ENSOCUG00000013592 #28 SULT3A1 (ENSOCUG00000021060) ENSOCUG00000022763 ENSOCUG00000021703 KPNA5 (ENSOCUG00000007812) #31 RSPH4A (ENSOCUG00000009852) #29 ZUP1 (ENSOCUG00000007805) #30 ENSOCUG00000037695 Pika MODERN SPECIES 3259 DSE (ENSOPRG00000005682) #22 CALHM6 (ENSOPRG00000005695) #24 TRAPPC3L (ENSOPRG00000005702) #25 CALHM5 (ENSOPRG00000005717) #26 RWDD1 (ENSOPRG00000005722) #28 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00990000213455 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Artiodactyla ANCESTRAL SPECIES 19 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Suina ANCESTRAL SPECIES 18 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00960000188119 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000013639 ENSGT00940000161538 ENSGT00950000183068.b ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 Pig MODERN SPECIES FAM229B (ENSSSCG00000036621) LAMA4 (ENSSSCG00000004425) ENSSSCG00000062211 RFPL4B (ENSSSCG00000050324) ENSSSCG00000043946 ENSSSCG00000047473 MARCKS (ENSSSCG00000037803) HDAC2 (ENSSSCG00000004432) HS3ST5 (ENSSSCG00000004433) ENSSSCG00000042456 FRK (ENSSSCG00000004434) NT5DC1 (ENSSSCG00000004435) COL10A1 (ENSSSCG00000004436) TSPYL4 (ENSSSCG00000047800) TSPYL1 (ENSSSCG00000004438) DSE (ENSSSCG00000004441) #22 CALHM6 (ENSSSCG00000036064) #24 TRAPPC3L (ENSSSCG00000040660) #25 CALHM5 (ENSSSCG00000031898) #26 CALHM4 (ENSSSCG00000004445) #27 ENSSSCG00000004446 #28 ENSSSCG00000025656 ENSSSCG00000023415 ENSSSCG00000043963 ENSSSCG00000040797 LGSN (ENSSSCG00000004450) RIPPLY2 (ENSSSCG00000062898) SNAP91 (ENSSSCG00000004453) PRSS35 (ENSSSCG00000004452) ME1 (ENSSSCG00000004454) RWDD2A (ENSSSCG00000029129) Chacoan peccary MODERN SPECIES 61 CCN6 (ENSCWAG00000008211) TUBE1 (ENSCWAG00000008369) FAM229B (ENSCWAG00000008405) LAMA4 (ENSCWAG00000008444) MARCKS (ENSCWAG00000008550) ENSCWAG00000008580 HDAC2 (ENSCWAG00000008651) HS3ST5 (ENSCWAG00000008713) FRK (ENSCWAG00000008748) NT5DC1 (ENSCWAG00000008856) COL10A1 (ENSCWAG00000008896) ENSCWAG00000008941 ENSCWAG00000008967 TSPYL4 (ENSCWAG00000009011) TSPYL1 (ENSCWAG00000009025) DSE (ENSCWAG00000009050) #22 CALHM6 (ENSCWAG00000009128) #24 TRAPPC3L (ENSCWAG00000009152) #25 CALHM5 (ENSCWAG00000009224) #26 CALHM4 (ENSCWAG00000009259) #27 RWDD1 (ENSCWAG00000009319) #28 LGSN (ENSCWAG00000009373) ENSCWAG00000009512 SNAP91 (ENSCWAG00000009617) PRSS35 (ENSCWAG00000010881) ME1 (ENSCWAG00000010897) RWDD2A (ENSCWAG00000010932) PGM3 (ENSCWAG00000010966) DOP1A (ENSCWAG00000011136) UBE3D (ENSCWAG00000011379) TPBG (ENSCWAG00000012210) Artiodactyla_a ANCESTRAL SPECIES 21 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.q.a ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Artiodactyla_b ANCESTRAL SPECIES 18 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Cetacea ANCESTRAL SPECIES 18 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Odontoceti ANCESTRAL SPECIES 18 ENSGT00390000017996.b.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000154951.j.b ENSGT00940000158991 ENSGT00390000010210.g ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Odontoceti_a ANCESTRAL SPECIES 16 ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00390000010526 ENSGT00940000155725.c.a ENSGT00940000154951.j.b ENSGT00940000158991 ENSGT00390000010210.g ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Odontoceti_b ANCESTRAL SPECIES 18 ENSGT00390000017996.b.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725.c.a ENSGT00940000154951.j.b ENSGT00940000158991 ENSGT00390000010210.g ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Monodontidae ANCESTRAL SPECIES 18 ENSGT00940000155723 ENSGT00390000017996.b.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725.c.a ENSGT00940000154951.j.b ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT00390000009168 #28 ENSGT00940000156772.r ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Narwhal MODERN SPECIES 301 TUBE1 (ENSMMNG00015005178) ENSMMNG00015005185 LAMA4 (ENSMMNG00015005201) RFPL4B (ENSMMNG00015005237) MARCKS (ENSMMNG00015005242) ENSMMNG00015005256 ENSMMNG00015005291 HS3ST5 (ENSMMNG00015005299) FRK (ENSMMNG00015005316) NT5DC1 (ENSMMNG00015005330) ENSMMNG00015005344 COL10A1 (ENSMMNG00015005355) ENSMMNG00015005366 TSPYL4 (ENSMMNG00015005368) TSPYL1 (ENSMMNG00015005374) DSE (ENSMMNG00015005398) #22 CALHM6 (ENSMMNG00015005416) #24 ENSMMNG00015005423 #25 CALHM5 (ENSMMNG00015005431) #26 RWDD1 (ENSMMNG00015005444) #28 ENSMMNG00015005470 RSPH4A (ENSMMNG00015005528) #29 ZUP1 (ENSMMNG00015005586) #30 KPNA5 (ENSMMNG00015005622) #31 ENSMMNG00015005645 RFX6 (ENSMMNG00015005664) #34 VGLL2 (ENSMMNG00015005717) ROS1 (ENSMMNG00015005760) DCBLD1 (ENSMMNG00015005797) GOPC (ENSMMNG00015005841) ENSMMNG00015005868 Beluga whale MODERN SPECIES 80 TUBE1 (ENSDLEG00000008584) ENSDLEG00000008624 LAMA4 (ENSDLEG00000008657) ENSDLEG00000008750 MARCKS (ENSDLEG00000008765) ENSDLEG00000008805 ENSDLEG00000008835 HS3ST5 (ENSDLEG00000008858) FRK (ENSDLEG00000008878) NT5DC1 (ENSDLEG00000008913) COL10A1 (ENSDLEG00000008950) ENSDLEG00000008963 ENSDLEG00000008984 TSPYL4 (ENSDLEG00000009007) TSPYL1 (ENSDLEG00000009017) DSE (ENSDLEG00000009031) #22 CALHM6 (ENSDLEG00000009051) #24 TRAPPC3L (ENSDLEG00000009065) #25 CALHM5 (ENSDLEG00000009096) #26 RWDD1 (ENSDLEG00000009107) #28 ENSDLEG00000009142 RSPH4A (ENSDLEG00000009231) #29 ZUFSP (ENSDLEG00000009259) #30 KPNA5 (ENSDLEG00000009304) #31 ENSDLEG00000009360 #32 RFX6 (ENSDLEG00000009399) #34 VGLL2 (ENSDLEG00000009573) ROS1 (ENSDLEG00000009633) DCBLD1 (ENSDLEG00000010188) GOPC (ENSDLEG00000010264) ENSDLEG00000010330 Vaquita MODERN SPECIES 3 FYN (ENSPSNG00000008944) CCN6 (ENSPSNG00000008779) TUBE1 (ENSPSNG00000008724) ENSPSNG00000008695 LAMA4 (ENSPSNG00000008592) RFPL4B (ENSPSNG00000008570) MARCKS (ENSPSNG00000008534) ENSPSNG00000008494 HS3ST5 (ENSPSNG00000008454) ENSPSNG00000008427 FRK (ENSPSNG00000008357) COL10A1 (ENSPSNG00000008333) NT5DC1 (ENSPSNG00000008301) TSPYL4 (ENSPSNG00000008269) TSPYL1 (ENSPSNG00000008248) DSE (ENSPSNG00000015522) #22 CALHM6 (ENSPSNG00000015458) #24 ENSPSNG00000015417 #25 CALHM5 (ENSPSNG00000015370) #26 RWDD1 (ENSPSNG00000015291) #28 ENSPSNG00000015188 ENSPSNG00000015114 RSPH4A (ENSPSNG00000014807) #29 ZUP1 (ENSPSNG00000014675) #30 KPNA5 (ENSPSNG00000014587) #31 ENSPSNG00000014478 #33 RFX6 (ENSPSNG00000014229) #34 VGLL2 (ENSPSNG00000014117) ROS1 (ENSPSNG00000012984) ENSPSNG00000012888 DCBLD1 (ENSPSNG00000012812) Dolphin MODERN SPECIES 3432 DSE (ENSTTRG00000016545) #22 ENSTTRG00000016546 #24 ENSTTRG00000016547 #25 CALHM5 (ENSTTRG00000016548) #26 RWDD1 (ENSTTRG00000016549) #28 Sperm whale MODERN SPECIES 1 CCN6 (ENSPCTG00005015245) TUBE1 (ENSPCTG00005015173) FAM229B (ENSPCTG00005015125) LAMA4 (ENSPCTG00005014812) RFPL4B (ENSPCTG00005014764) MARCKS (ENSPCTG00005014735) HDAC2 (ENSPCTG00005014660) ENSPCTG00005014592 HS3ST5 (ENSPCTG00005014555) ENSPCTG00005014516 FRK (ENSPCTG00005014412) COL10A1 (ENSPCTG00005014373) NT5DC1 (ENSPCTG00005014318) TSPYL4 (ENSPCTG00005014296) TSPYL1 (ENSPCTG00005014244) DSE (ENSPCTG00005014130) #22 CALHM6 (ENSPCTG00005014068) #24 ENSPCTG00005014023 #25 CALHM5 (ENSPCTG00005013991) #26 CALHM4 (ENSPCTG00005013957) #27 RWDD1 (ENSPCTG00005013868) #28 ENSPCTG00005013836 RSPH4A (ENSPCTG00005013636) #29 ZUP1 (ENSPCTG00005013556) #30 KPNA5 (ENSPCTG00005013498) #31 ENSPCTG00005013476 ENSPCTG00005013422 GPRC6A (ENSPCTG00005013287) #33 RFX6 (ENSPCTG00005013021) #34 VGLL2 (ENSPCTG00005012958) ROS1 (ENSPCTG00005012163) Blue whale MODERN SPECIES 3 ENSBMSG00010013144 FYN (ENSBMSG00010013133) CCN6 (ENSBMSG00010013102) TUBE1 (ENSBMSG00010013084) ENSBMSG00010013077 LAMA4 (ENSBMSG00010013059) RFPL4B (ENSBMSG00010013050) MARCKS (ENSBMSG00010013045) ENSBMSG00010013029 HS3ST5 (ENSBMSG00010013020) FRK (ENSBMSG00010013005) COL10A1 (ENSBMSG00010012998) NT5DC1 (ENSBMSG00010012985) TSPYL4 (ENSBMSG00010012977) TSPYL1 (ENSBMSG00010012974) DSE (ENSBMSG00010012963) #22 CALHM6 (ENSBMSG00010012947) #24 ENSBMSG00010012945 #25 CALHM5 (ENSBMSG00010012937) #26 RWDD1 (ENSBMSG00010012927) #28 ENSBMSG00010012918 RSPH4A (ENSBMSG00010012884) #29 ZUP1 (ENSBMSG00010012859) #30 KPNA5 (ENSBMSG00010012836) #31 ENSBMSG00010012825 FAM162B (ENSBMSG00010012817) #32 RFX6 (ENSBMSG00010012789) #34 VGLL2 (ENSBMSG00010012771) ROS1 (ENSBMSG00010012625) DCBLD1 (ENSBMSG00010012558) GOPC (ENSBMSG00010012533) Pecora ANCESTRAL SPECIES 19 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.q.a ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Percora_a ANCESTRAL SPECIES 21 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.q.a ENSGT00390000009168.v.a #28 ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Bovidae ANCESTRAL SPECIES 21 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.q.a ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Bovinae ANCESTRAL SPECIES 31 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821.g.a ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.q.a ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Bos ANCESTRAL SPECIES 19 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821.g.a ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.q.a ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Bos_b ANCESTRAL SPECIES 24 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723.c ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821.g.a ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.r ENSGT00940000156772.q.a ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Cow MODERN SPECIES 28 TRAF3IP2 (ENSBTAG00000008600) FYN (ENSBTAG00000011851) CCN6 (ENSBTAG00000017205) TUBE1 (ENSBTAG00000013837) FAM229B (ENSBTAG00000033429) LAMA4 (ENSBTAG00000008817) MARCKS (ENSBTAG00000002082) HDAC2 (ENSBTAG00000011849) ENSBTAG00000049305 HS3ST5 (ENSBTAG00000000188) FRK (ENSBTAG00000020018) COL10A1 (ENSBTAG00000003078) NT5DC1 (ENSBTAG00000003076) TSPYL4 (ENSBTAG00000009127) TSPYL1 (ENSBTAG00000010885) DSE (ENSBTAG00000005205) #22 CALHM6 (ENSBTAG00000006549) #24 CALHM5 (ENSBTAG00000045879) #26 TRAPPC3L (ENSBTAG00000033554) #25 CALHM4 (ENSBTAG00000033535) #27 RWDD1 (ENSBTAG00000009689) #28 SULT1C4 (ENSBTAG00000026672) ENSBTAG00000050815 RSPH4A (ENSBTAG00000011890) #29 ZUP1 (ENSBTAG00000003878) #30 KPNA5 (ENSBTAG00000026673) #31 FAM162B (ENSBTAG00000033460) #32 RFX6 (ENSBTAG00000000264) #34 VGLL2 (ENSBTAG00000046282) ROS1 (ENSBTAG00000047600) DCBLD1 (ENSBTAG00000047338) Hybrid Bos Indicus MODERN SPECIES 28 FYN (ENSBIXG00005009408) ENSBIXG00005009470 ENSBIXG00005009508 FAM229B (ENSBIXG00005009541) LAMA4 (ENSBIXG00005009675) ENSBIXG00005009782 MARCKS (ENSBIXG00005005803) ENSBIXG00005009805 HDAC2 (ENSBIXG00005005946) HS3ST5 (ENSBIXG00005000647) FRK (ENSBIXG00005009902) COL10A1 (ENSBIXG00005009915) NT5DC1 (ENSBIXG00005009924) TSPYL4 (ENSBIXG00005009942) ENSBIXG00005009950 DSE (ENSBIXG00005009989) #22 CALHM6 (ENSBIXG00005010017) #24 CALHM5 (ENSBIXG00005000765) #26 TRAPPC3L (ENSBIXG00005010050) #25 CALHM4 (ENSBIXG00005010065) #27 ENSBIXG00005006416 #28 ENSBIXG00005010118 ENSBIXG00005010142 RSPH4A (ENSBIXG00005010221) #29 ZUP1 (ENSBIXG00005010258) #30 KPNA5 (ENSBIXG00005000829) #31 FAM162B (ENSBIXG00005010298) #32 RFX6 (ENSBIXG00005010323) #34 VGLL2 (ENSBIXG00005010356) ROS1 (ENSBIXG00005010381) DCBLD1 (ENSBIXG00005000746) Bos_a ANCESTRAL SPECIES 18 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821.g.a ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.b #28 ENSGT00940000156772.q.a ENSGT00940000156772.q.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Wild yak MODERN SPECIES 2090 FRK (ENSBMUG00000004546) COL10A1 (ENSBMUG00000004529) NT5DC1 (ENSBMUG00000004517) TSPYL4 (ENSBMUG00000004509) ENSBMUG00000004500 DSE (ENSBMUG00000004486) #22 ENSBMUG00000004450 #24 Domestic yak MODERN SPECIES 1 ENSBGRG00000012563 TUBE1 (ENSBGRG00000012582) FAM229B (ENSBGRG00000012646) LAMA4 (ENSBGRG00000012696) ENSBGRG00000013479 ENSBGRG00000013503 ENSBGRG00000013525 MARCKS (ENSBGRG00000013546) HDAC2 (ENSBGRG00000013629) HS3ST5 (ENSBGRG00000013854) FRK (ENSBGRG00000005311) NT5DC1 (ENSBGRG00000005373) COL10A1 (ENSBGRG00000005476) TSPYL4 (ENSBGRG00000005502) ENSBGRG00000005510 DSE (ENSBGRG00000005532) #22 CALHM6 (ENSBGRG00000005600) #24 TRAPPC3L (ENSBGRG00000005625) #25 CALHM5 (ENSBGRG00000005669) #26 CALHM4 (ENSBGRG00000005714) #27 RWDD1 (ENSBGRG00000005754) #28 ENSBGRG00000005844 RSPH4A (ENSBGRG00000005878) #29 ZUP1 (ENSBGRG00000005961) #30 KPNA5 (ENSBGRG00000006026) #31 FAM162B (ENSBGRG00000006132) #32 RFX6 (ENSBGRG00000006177) #34 VGLL2 (ENSBGRG00000006319) ROS1 (ENSBGRG00000006479) ENSBGRG00000006843 ENSBGRG00000006862 American bison MODERN SPECIES 3332 MMP15 (ENSBBBG00000009486) CFAP20 (ENSBBBG00000009492) CSNK2A2 (ENSBBBG00000009499) CCDC113 (ENSBBBG00000001521) ENSBBBG00000009506 GINS3 (ENSBBBG00000009512) NDRG4 (ENSBBBG00000009621) SETD6 (ENSBBBG00000009667) CNOT1 (ENSBBBG00000009711) SLC38A7 (ENSBBBG00000009730) GOT2 (ENSBBBG00000009736) COL10A1 (ENSBBBG00000009745) NT5DC1 (ENSBBBG00000009754) TSPYL4 (ENSBBBG00000009756) ENSBBBG00000009757 DSE (ENSBBBG00000009038) #22 ENSBBBG00000009766 #24 CALHM5 (ENSBBBG00000001616) #26 TRAPPC3L (ENSBBBG00000009772) #25 CALHM4 (ENSBBBG00000009776) #27 ENSBBBG00000009781 #28 RSPH4A (ENSBBBG00000009798) #29 ZUP1 (ENSBBBG00000009809) #30 KPNA5 (ENSBBBG00000009821) #31 FAM162B (ENSBBBG00000009824) #32 RFX6 (ENSBBBG00000009832) #34 VGLL2 (ENSBBBG00000009836) ROS1 (ENSBBBG00000009903) DCBLD1 (ENSBBBG00000001665) GOPC (ENSBBBG00000009979) ENSBBBG00000009991 Caprinae ANCESTRAL SPECIES 33 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168.v.a.b #28 ENSGT00940000156772.q.a ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Rambouillet Sheep MODERN SPECIES 24 FYN (ENSOARG00020005590) CCN6 (ENSOARG00020005518) TUBE1 (ENSOARG00020005476) FAM229B (ENSOARG00020005460) LAMA4 (ENSOARG00020005126) MARCKS (ENSOARG00020005081) HDAC2 (ENSOARG00020004977) HS3ST5 (ENSOARG00020004941) ENSOARG00020004910 FRK (ENSOARG00020004867) COL10A1 (ENSOARG00020004849) NT5DC1 (ENSOARG00020004710) ENSOARG00020004693 ENSOARG00020004681 TSPYL1 (ENSOARG00020004668) DSE (ENSOARG00020004597) #22 CALHM5 (ENSOARG00020004537) #26 TRAPPC3L (ENSOARG00020004501) #25 CALHM4 (ENSOARG00020004478) #27 ENSOARG00020004445 #28 ENSOARG00020004418 ZUP1 (ENSOARG00020004156) #30 KPNA5 (ENSOARG00020004060) #31 FAM162B (ENSOARG00020004032) #32 RFX6 (ENSOARG00020003959) #34 VGLL2 (ENSOARG00020003907) ROS1 (ENSOARG00020003121) DCBLD1 (ENSOARG00020023381) GOPC (ENSOARG00020023190) ENSOARG00020023154 NUS1 (ENSOARG00020023137) Goat MODERN SPECIES 28 MFSD4B (ENSCHIG00000014717) REV3L (ENSCHIG00000023002) TRAF3IP2 (ENSCHIG00000019593) FYN (ENSCHIG00000009044) CCN6 (ENSCHIG00000025400) TUBE1 (ENSCHIG00000020635) FAM229B (ENSCHIG00000018398) LAMA4 (ENSCHIG00000019560) MARCKS (ENSCHIG00000009392) HDAC2 (ENSCHIG00000024213) HS3ST5 (ENSCHIG00000019513) FRK (ENSCHIG00000006701) COL10A1 (ENSCHIG00000008425) NT5DC1 (ENSCHIG00000025209) TSPYL1 (ENSCHIG00000013019) DSE (ENSCHIG00000010064) #22 ENSCHIG00000025860 #24 ENSCHIG00000022717 #24 CALHM5 (ENSCHIG00000018702) #26 TRAPPC3L (ENSCHIG00000021481) #25 CALHM4 (ENSCHIG00000006125) #27 ENSCHIG00000020636 #28 ENSCHIG00000014681 RSPH4A (ENSCHIG00000022737) #29 ZUP1 (ENSCHIG00000022998) #30 FAM162B (ENSCHIG00000013451) #32 KPNA5 (ENSCHIG00000025297) #31 RFX6 (ENSCHIG00000021570) #34 VGLL2 (ENSCHIG00000014445) ROS1 (ENSCHIG00000016323) ENSCHIG00000010524 Siberian musk deer MODERN SPECIES 55 MARCKS (ENSMMSG00000004987) ENSMMSG00000004892 HS3ST5 (ENSMMSG00000004861) ENSMMSG00000004852 ENSMMSG00000004842 ENSMMSG00000004817 ENSMMSG00000004714 FRK (ENSMMSG00000004640) COL10A1 (ENSMMSG00000004611) NT5DC1 (ENSMMSG00000004536) TSPYL4 (ENSMMSG00000004521) TSPYL1 (ENSMMSG00000004513) DSE (ENSMMSG00000004477) #22 CALHM6 (ENSMMSG00000004443) #24 CALHM5 (ENSMMSG00000004430) #26 TRAPPC3L (ENSMMSG00000004425) #25 CALHM4 (ENSMMSG00000004408) #27 ENSMMSG00000004377 #28 ENSMMSG00000004355 ENSMMSG00000004337 RSPH4A (ENSMMSG00000004275) #29 ZUP1 (ENSMMSG00000004239) #30 KPNA5 (ENSMMSG00000004217) #31 FAM162B (ENSMMSG00000004205) #32 RFX6 (ENSMMSG00000004143) #34 VGLL2 (ENSMMSG00000004130) ROS1 (ENSMMSG00000003965) DCBLD1 (ENSMMSG00000003913) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 20 TRAF3IP2 (ENSCHYG00000024612) FYN (ENSCHYG00000024400) CCN6 (ENSCHYG00000024312) TUBE1 (ENSCHYG00000024271) FAM229B (ENSCHYG00000024251) LAMA4 (ENSCHYG00000023891) MARCKS (ENSCHYG00000023854) ENSCHYG00000023836 ENSCHYG00000023650 HS3ST5 (ENSCHYG00000023609) FRK (ENSCHYG00000023541) COL10A1 (ENSCHYG00000023514) NT5DC1 (ENSCHYG00000023450) TSPYL4 (ENSCHYG00000023428) ENSCHYG00000023415 ENSCHYG00000023336 #22 CALHM6 (ENSCHYG00000023311) #24 CALHM5 (ENSCHYG00000023274) #26 TRAPPC3L (ENSCHYG00000023206) #25 CALHM4 (ENSCHYG00000023149) #27 ENSCHYG00000023080 #28 ENSCHYG00000023038 RSPH4A (ENSCHYG00000022831) #29 ZUP1 (ENSCHYG00000022708) #30 KPNA5 (ENSCHYG00000022607) #31 FAM162B (ENSCHYG00000022579) #32 RFX6 (ENSCHYG00000022453) #34 ENSCHYG00000022426 ROS1 (ENSCHYG00000021945) DCBLD1 (ENSCHYG00000021744) GOPC (ENSCHYG00000021189) Yarkand deer MODERN SPECIES 9 ELAPOR2 (ENSCHYG00000016227) GRM3 (ENSCHYG00000016901) SEMA3D (ENSCHYG00000017029) ENSCHYG00000017154 SEMA3A (ENSCHYG00000017259) SEMA3E (ENSCHYG00000017799) PCLO (ENSCHYG00000018027) CACNA2D1 (ENSCHYG00000018295) HGF (ENSCHYG00000019398) SEMA3C (ENSCHYG00000019620) CD36 (ENSCHYG00000019791) GNAT3 (ENSCHYG00000020496) ENSCHYG00000020590 ENSCHYG00000020617 GNAI1 (ENSCHYG00000020676) ENSCHYG00000020911 #22 MAGI2 (ENSCHYG00000021178) PHTF2 (ENSCHYG00000023683) ENSCHYG00000024021 ENSCHYG00000024038 ENSCHYG00000024090 PTPN12 (ENSCHYG00000024111) ENSCHYG00000024152 ENSCHYG00000024161 GSAP (ENSCHYG00000024234) CCDC146 (ENSCHYG00000024657) FGL2 (ENSCHYG00000024744) FAM185A (ENSCHYG00000024761) ENSCHYG00000024825 FBXL13 (ENSCHYG00000024841) ENSCHYG00000024862 Camelidae ANCESTRAL SPECIES 26 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.q.a ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Alpaca MODERN SPECIES 3577 FRK (ENSVPAG00000001075) NT5DC1 (ENSVPAG00000001079) ENSVPAG00000001084 DSE (ENSVPAG00000001089) #22 Arabian camel MODERN SPECIES 34 CCN6 (ENSCDRG00005003392) TUBE1 (ENSCDRG00005003362) FAM229B (ENSCDRG00005003348) LAMA4 (ENSCDRG00005003254) ENSCDRG00005003222 MARCKS (ENSCDRG00005003193) ENSCDRG00005003186 HDAC2 (ENSCDRG00005003171) HS3ST5 (ENSCDRG00005003162) FRK (ENSCDRG00005003143) ENSCDRG00005003130 COL10A1 (ENSCDRG00005003121) NT5DC1 (ENSCDRG00005003104) TSPYL4 (ENSCDRG00005003098) TSPYL1 (ENSCDRG00005003092) DSE (ENSCDRG00005003068) #22 CALHM6 (ENSCDRG00005003016) #24 CALHM5 (ENSCDRG00005003006) #26 TRAPPC3L (ENSCDRG00005002989) #25 CALHM4 (ENSCDRG00005002979) #27 RWDD1 (ENSCDRG00005002965) #28 ENSCDRG00005002955 RSPH4A (ENSCDRG00005002922) #29 ZUP1 (ENSCDRG00005002876) #30 KPNA5 (ENSCDRG00005002825) #31 FAM162B (ENSCDRG00005002796) #32 GPRC6A (ENSCDRG00005002744) #33 RFX6 (ENSCDRG00005002698) #34 ENSCDRG00005002682 ROS1 (ENSCDRG00005002608) DCBLD1 (ENSCDRG00005002557) Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Chiroptera ANCESTRAL SPECIES 3 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Greater horseshoe bat MODERN SPECIES 21 TRAF3IP2 (ENSRFEG00010016167) ENSRFEG00010016261 FYN (ENSRFEG00010016290) CCN6 (ENSRFEG00010016469) TUBE1 (ENSRFEG00010016655) FAM229B (ENSRFEG00010016724) LAMA4 (ENSRFEG00010016795) RFPL4B (ENSRFEG00010016880) MARCKS (ENSRFEG00010016931) HDAC2 (ENSRFEG00010016988) HS3ST5 (ENSRFEG00010017069) ENSRFEG00010017121 FRK (ENSRFEG00010017139) NT5DC1 (ENSRFEG00010017166) COL10A1 (ENSRFEG00010017207) DSE (ENSRFEG00010017346) #22 CALHM6 (ENSRFEG00010017443) #24 TRAPPC3L (ENSRFEG00010017466) #25 CALHM5 (ENSRFEG00010017554) #26 CALHM4 (ENSRFEG00010017600) #27 ENSRFEG00010017650 #28 ENSRFEG00010017720 ENSRFEG00010017788 ENSRFEG00010017801 RSPH4A (ENSRFEG00010017838) #29 ZUP1 (ENSRFEG00010018008) #30 KPNA5 (ENSRFEG00010018178) #31 FAM162B (ENSRFEG00010018217) #32 RFX6 (ENSRFEG00010018276) #34 VGLL2 (ENSRFEG00010018446) ROS1 (ENSRFEG00010018524) Microbat MODERN SPECIES 994 ENSMLUG00000002390 PCMT1 (ENSMLUG00000002385) NUP43 (ENSMLUG00000002078) LATS1 (ENSMLUG00000002070) KATNA1 (ENSMLUG00000002062) GINM1 (ENSMLUG00000002059) PPIL4 (ENSMLUG00000002766) ZC3H12D (ENSMLUG00000029238) TAB2 (ENSMLUG00000005344) ENSMLUG00000023007 UST (ENSMLUG00000005127) ENSMLUG00000008313 COL10A1 (ENSMLUG00000008338) TSPYL4 (ENSMLUG00000015727) TSPYL1 (ENSMLUG00000008370) DSE (ENSMLUG00000002926) #22 CALHM6 (ENSMLUG00000002931) #24 TRAPPC3L (ENSMLUG00000002941) #25 CALHM5 (ENSMLUG00000029405) #26 CALHM4 (ENSMLUG00000011357) #27 RWDD1 (ENSMLUG00000030427) #28 ENSMLUG00000024652 ENSMLUG00000028869 ENSMLUG00000030160 ENSMLUG00000029713 RSPH4A (ENSMLUG00000015892) #29 ZUP1 (ENSMLUG00000015906) #30 KPNA5 (ENSMLUG00000010070) #31 FAM162B (ENSMLUG00000010100) #32 GPRC6A (ENSMLUG00000010115) #33 RFX6 (ENSMLUG00000006665) #34 Megabat MODERN SPECIES 6986 DSE (ENSPVAG00000001002) #22 CALHM6 (ENSPVAG00000001004) #24 Equus ANCESTRAL SPECIES 29 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT01010000228913 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.o ENSGT00940000156772.p.a ENSGT00940000156772.p.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a Horse MODERN SPECIES 1 FYN (ENSECAG00000008319) CCN6 (ENSECAG00000013347) TUBE1 (ENSECAG00000013843) LAMA4 (ENSECAG00000018584) RFPL4B (ENSECAG00000041082) MARCKS (ENSECAG00000003398) ENSECAG00000055511 HDAC2 (ENSECAG00000013577) HS3ST5 (ENSECAG00000018033) FRK (ENSECAG00000018039) NT5DC1 (ENSECAG00000019833) COL10A1 (ENSECAG00000020826) TSPYL1 (ENSECAG00000003736) TSPYL4 (ENSECAG00000030611) ENSECAG00000031694 DSE (ENSECAG00000020975) #22 ENSECAG00000021708 #24 ENSECAG00000051818 TRAPPC3L (ENSECAG00000021978) #25 CALHM5 (ENSECAG00000023268) #26 CALHM4 (ENSECAG00000000714) #27 RWDD1 (ENSECAG00000006587) #28 ENSECAG00000051393 ENSECAG00000010770 ENSECAG00000044333 RSPH4A (ENSECAG00000012533) #29 ZUP1 (ENSECAG00000013523) #30 KPNA5 (ENSECAG00000014734) #31 FAM162B (ENSECAG00000019150) #32 GPRC6A (ENSECAG00000019182) #33 RFX6 (ENSECAG00000019804) #34 Donkey MODERN SPECIES 16 FYN (ENSEASG00005007033) CCN6 (ENSEASG00005008053) TUBE1 (ENSEASG00005008069) FAM229B (ENSEASG00005028359) LAMA4 (ENSEASG00005008172) RFPL4B (ENSEASG00005038508) MARCKS (ENSEASG00005008354) HDAC2 (ENSEASG00005008358) ENSEASG00005029672 HS3ST5 (ENSEASG00005033931) FRK (ENSEASG00005008367) NT5DC1 (ENSEASG00005008369) COL10A1 (ENSEASG00005008370) TSPYL4 (ENSEASG00005008371) TSPYL1 (ENSEASG00005032253) DSE (ENSEASG00005008373) #22 ENSEASG00005008375 #24 TRAPPC3L (ENSEASG00005029591) #25 CALHM5 (ENSEASG00005008378) #26 CALHM4 (ENSEASG00005008379) #27 RWDD1 (ENSEASG00005008380) #28 ENSEASG00005008382 ENSEASG00005031003 ENSEASG00005028545 ENSEASG00005009048 RSPH4A (ENSEASG00005009050) #29 ZUP1 (ENSEASG00005009054) #30 KPNA5 (ENSEASG00005009059) #31 FAM162B (ENSEASG00005034252) #32 GPRC6A (ENSEASG00005009064) #33 RFX6 (ENSEASG00005009070) #34 Carnivora ANCESTRAL SPECIES 4 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT01050000247848 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Caniformia ANCESTRAL SPECIES 3 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Canidae ANCESTRAL SPECIES 34 ENSGT00640000091563.a ENSGT00390000007441 ENSGT01030000234667.b ENSGT00990000203619.A.b.b.a ENSGT00530000063927.a.a ENSGT00940000162752 ENSGT00530000063359.A ENSGT00940000155237 ENSGT00940000162166 ENSGT00940000162787 ENSGT00950000183181.A.a ENSGT00390000018436.a.b ENSGT00940000157846 ENSGT00390000012017.ib ENSGT00390000012017.hb ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Canis_lupus ANCESTRAL SPECIES ENSGT00390000007441 ENSGT01030000234667.b ENSGT00990000203619.A.b.b.a ENSGT00530000063927.a.a ENSGT00950000185354 ENSGT00940000162752 ENSGT00530000063359.A ENSGT00940000155237 ENSGT00940000162166 ENSGT00940000162787 ENSGT00950000183181.A.a ENSGT00390000018436.a.b ENSGT00940000157846 ENSGT00390000012017.ib ENSGT00390000012017.hb ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Dingo MODERN SPECIES 125 RPS6KA2 (ENSCAFG00020019329) ENSCAFG00020019344 CEP43 (ENSCAFG00020019346) ENSCAFG00020019351 CCR6 (ENSCAFG00020019355) GPR31 (ENSCAFG00020019357) ENSCAFG00020019364 TTLL2 (ENSCAFG00020019369) UNC93A (ENSCAFG00020019373) AFDN (ENSCAFG00020019469) KIF25 (ENSCAFG00020021134) DACT2 (ENSCAFG00020021138) SMOC2 (ENSCAFG00020021152) THBS2 (ENSCAFG00020021212) WDR27 (ENSCAFG00020021252) DSE (ENSCAFG00020021286) #22 CALHM6 (ENSCAFG00020021288) #24 TRAPPC3L (ENSCAFG00020021289) #25 CALHM5 (ENSCAFG00020021296) #26 ENSCAFG00020021302 RWDD1 (ENSCAFG00020021303) #28 ENSCAFG00020021310 ENSCAFG00020021315 RSPH4A (ENSCAFG00020021320) #29 ZUP1 (ENSCAFG00020021322) #30 KPNA5 (ENSCAFG00020021324) #31 FAM162B (ENSCAFG00020021355) #32 GPRC6A (ENSCAFG00020021358) #33 RFX6 (ENSCAFG00020021362) #34 VGLL2 (ENSCAFG00020021376) ROS1 (ENSCAFG00020021389) Dog MODERN SPECIES CCR6 (ENSCAFG00845004836) GPR31 (ENSCAFG00845004842) ENSCAFG00845004845 ENSCAFG00845004856 ENSCAFG00845004865 ENSCAFG00845004871 UNC93A (ENSCAFG00845004882) ENSCAFG00845004891 ENSCAFG00845004971 ENSCAFG00845005088 FRMD1 (ENSCAFG00845005116) DACT2 (ENSCAFG00845005143) SMOC2 (ENSCAFG00845005168) THBS2 (ENSCAFG00845005227) ENSCAFG00845005366 DSE (ENSCAFG00845005500) #22 CALHM6 (ENSCAFG00845005516) #24 TRAPPC3L (ENSCAFG00845005532) #25 CALHM5 (ENSCAFG00845005557) #26 CALHM4 (ENSCAFG00845005573) #27 RWDD1 (ENSCAFG00845005610) #28 ENSCAFG00845005641 RSPH4A (ENSCAFG00845005676) #29 ZUP1 (ENSCAFG00845005699) #30 KPNA5 (ENSCAFG00845005742) #31 FAM162B (ENSCAFG00845005779) #32 GPRC6A (ENSCAFG00845005820) #33 RFX6 (ENSCAFG00845005871) #34 VGLL2 (ENSCAFG00845005929) ROS1 (ENSCAFG00845006019) DCBLD1 (ENSCAFG00845006335) Red fox MODERN SPECIES 40 ENSVVUG00000016767 ENSVVUG00000016751 ENSVVUG00000016732 DSE (ENSVVUG00000016723) #22 CALHM6 (ENSVVUG00000016722) #24 ENSVVUG00000016721 CALHM5 (ENSVVUG00000016720) #26 CALHM4 (ENSVVUG00000016718) #27 TRAPPC3L (ENSVVUG00000016711) #25 ENSVVUG00000016707 #28 ENSVVUG00000016705 RSPH4A (ENSVVUG00000016700) #29 ZUP1 (ENSVVUG00000016696) #30 KPNA5 (ENSVVUG00000016678) #31 FAM162B (ENSVVUG00000016671) #32 GPRC6A (ENSVVUG00000016663) #33 RFX6 (ENSVVUG00000016613) #34 ENSVVUG00000016599 VGLL2 (ENSVVUG00000016593) Caniformia_b ANCESTRAL SPECIES 6 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Ursidae ANCESTRAL SPECIES 22 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Ursus ANCESTRAL SPECIES 45 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 American black bear MODERN SPECIES 3339 TSPYL4 (ENSUAMG00000024772) TSPYL1 (ENSUAMG00000024771) DSE (ENSUAMG00000024769) #22 Polar bear MODERN SPECIES 172 FRK (ENSUMAG00000004055) ENSUMAG00000004050 COL10A1 (ENSUMAG00000004046) NT5DC1 (ENSUMAG00000003847) TSPYL4 (ENSUMAG00000003828) TSPYL1 (ENSUMAG00000003820) DSE (ENSUMAG00000003818) #22 ENSUMAG00000003807 #24 CALHM5 (ENSUMAG00000003806) #26 TRAPPC3L (ENSUMAG00000003801) #25 CALHM4 (ENSUMAG00000003797) #27 RWDD1 (ENSUMAG00000003790) #28 ENSUMAG00000003779 ENSUMAG00000003759 #29 ZUP1 (ENSUMAG00000003755) #30 KPNA5 (ENSUMAG00000003152) #31 FAM162B (ENSUMAG00000003081) #32 GPRC6A (ENSUMAG00000003068) #33 RFX6 (ENSUMAG00000003019) #34 ENSUMAG00000003008 ROS1 (ENSUMAG00000002961) ENSUMAG00000002944 Giant Panda MODERN SPECIES 1 FYN (ENSAMEG00000016721) CCN6 (ENSAMEG00000016733) TUBE1 (ENSAMEG00000016737) FAM229B (ENSAMEG00000027978) LAMA4 (ENSAMEG00000016747) RFPL4B (ENSAMEG00000019194) ENSAMEG00000031393 ENSAMEG00000025271 HDAC2 (ENSAMEG00000013147) HS3ST5 (ENSAMEG00000013224) FRK (ENSAMEG00000013338) NT5DC1 (ENSAMEG00000005670) COL10A1 (ENSAMEG00000013356) TSPYL4 (ENSAMEG00000019723) TSPYL1 (ENSAMEG00000005672) DSE (ENSAMEG00000005674) #22 CALHM6 (ENSAMEG00000005679) #24 TRAPPC3L (ENSAMEG00000005682) #25 CALHM5 (ENSAMEG00000005685) #26 CALHM4 (ENSAMEG00000005689) #27 RWDD1 (ENSAMEG00000005692) #28 ENSAMEG00000005716 ENSAMEG00000005725 ENSAMEG00000023971 RSPH4A (ENSAMEG00000005736) #29 ZUP1 (ENSAMEG00000005752) #30 KPNA5 (ENSAMEG00000005775) #31 FAM162B (ENSAMEG00000005819) #32 GPRC6A (ENSAMEG00000005823) #33 RFX6 (ENSAMEG00000005843) #34 ENSAMEG00000005850 Mustelinae ANCESTRAL SPECIES 26 ENSGT00940000155462 ENSGT00940000153112.D.h.c.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.b ENSGT01100000263517.b.d.m.a.a.a.a.c.k ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.a.a ENSGT01030000235909 ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.b ENSGT00950000182985.b.a ENSGT00390000004348 ENSGT00940000157723 ENSGT00940000157477 ENSGT00730000111244 ENSGT00940000158401 ENSGT00390000013337 ENSGT00530000064023.b American mink MODERN SPECIES 4 TRAF3IP2 (ENSNVIG00000005784) FYN (ENSNVIG00000005821) ENSNVIG00000006071 CCN6 (ENSNVIG00000006099) TUBE1 (ENSNVIG00000006184) CF225 (ENSNVIG00000006208) LAMA4 (ENSNVIG00000006222) RFPL4B (ENSNVIG00000006333) ENSNVIG00000006342 HDAC2 (ENSNVIG00000006360) HS3S5 (ENSNVIG00000006412) FRK (ENSNVIG00000006423) NT5DC1 (ENSNVIG00000006445) COL10A1 (ENSNVIG00000006451) TSPYL4 (ENSNVIG00000006466) DSE (ENSNVIG00000006494) #22 ENSNVIG00000006528 #25 CALHM5 (ENSNVIG00000006537) #26 ENSNVIG00000006541 ENSNVIG00000006546 ENSNVIG00000006567 ENSNVIG00000006590 ENSNVIG00000006632 ENSNVIG00000006638 ENSNVIG00000006654 PPP1R14C (ENSNVIG00000006672) IYD1 (ENSNVIG00000006683) ENSNVIG00000006714 PLEKHG1 (ENSNVIG00000006728) MTHFD1L (ENSNVIG00000006768) AKAP12 (ENSNVIG00000006843) Ferret MODERN SPECIES 201 ENSMPUG00000010210 FYN (ENSMPUG00000010222) ENSMPUG00000019124 CCN6 (ENSMPUG00000010231) TUBE1 (ENSMPUG00000010238) LAMA4 (ENSMPUG00000010247) RFPL4B (ENSMPUG00000019127) HDAC2 (ENSMPUG00000010268) ENSMPUG00000019130 HS3ST5 (ENSMPUG00000010276) FRK (ENSMPUG00000010284) NT5DC1 (ENSMPUG00000010294) COL10A1 (ENSMPUG00000010327) TSPYL4 (ENSMPUG00000019131) TSPYL1 (ENSMPUG00000019136) DSE (ENSMPUG00000010332) #22 CALHM5 (ENSMPUG00000010338) #26 ENSMPUG00000010344 ENSMPUG00000010351 ENSMPUG00000010367 ENSMPUG00000010372 ENSMPUG00000010376 ENSMPUG00000010380 ENSMPUG00000010393 ENSMPUG00000019141 IYD (ENSMPUG00000010397) PLEKHG1 (ENSMPUG00000010404) ENSMPUG00000010410 MTHFD1L (ENSMPUG00000010414) ENSMPUG00000010428 ENSMPUG00000010433 Felidae ANCESTRAL SPECIES 5 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT01050000247848 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000166162 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i.a.a ENSGT00940000156772.i.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Panthera ANCESTRAL SPECIES 7 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT01050000247848 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000166162 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i.a.a ENSGT00940000156772.i.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Panthera_a ANCESTRAL SPECIES 4 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT01050000247848 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00960000188119 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000166162 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772.i.a.a ENSGT00940000156772.i.b ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 leopard MODERN SPECIES 246 NT5DC1 (ENSPPRG00000022632) COL10A1 (ENSPPRG00000022643) TSPYL4 (ENSPPRG00000011586) DSE (ENSPPRG00000022657) #22 ENSPPRG00000022667 #24 TRAPPC3L (ENSPPRG00000022673) #25 CALHM5 (ENSPPRG00000022680) #26 CALHM4 (ENSPPRG00000022718) #27 RWDD1 (ENSPPRG00000022725) #28 ENSPPRG00000022751 lion MODERN SPECIES 5 CCN6 (ENSPLOG00000003072) TUBE1 (ENSPLOG00000003122) FAM229B (ENSPLOG00000003138) LAMA4 (ENSPLOG00000003185) ENSPLOG00000003271 MARCKS (ENSPLOG00000003280) ENSPLOG00000003352 HDAC2 (ENSPLOG00000003360) HS3ST5 (ENSPLOG00000003442) FRK (ENSPLOG00000003455) NT5DC1 (ENSPLOG00000003475) ENSPLOG00000003489 COL10A1 (ENSPLOG00000003502) TSPYL4 (ENSPLOG00000003518) ENSPLOG00000003526 DSE (ENSPLOG00000003558) #22 CALHM6 (ENSPLOG00000003580) #24 TRAPPC3L (ENSPLOG00000003593) #25 CALHM5 (ENSPLOG00000003609) #26 CALHM4 (ENSPLOG00000003619) #27 RWDD1 (ENSPLOG00000003637) #28 ENSPLOG00000003653 RSPH4A (ENSPLOG00000003687) #29 ZUP1 (ENSPLOG00000003730) #30 KPNA5 (ENSPLOG00000003759) #31 FAM162B (ENSPLOG00000003773) #32 GPRC6A (ENSPLOG00000003804) #33 RFX6 (ENSPLOG00000003852) #34 VGLL2 (ENSPLOG00000010770) ROS1 (ENSPLOG00000011040) DCBLD1 (ENSPLOG00000011135) Tiger MODERN SPECIES 120 TRAF3IP2 (ENSPTIG00000020472) FYN (ENSPTIG00000019895) ENSPTIG00000006415 CCN6 (ENSPTIG00000019399) TUBE1 (ENSPTIG00000019262) FAM229B (ENSPTIG00000019248) LAMA4 (ENSPTIG00000017802) RFPL4B (ENSPTIG00000006386) ENSPTIG00000006376 HDAC2 (ENSPTIG00000017437) HS3ST5 (ENSPTIG00000017379) FRK (ENSPTIG00000017241) COL10A1 (ENSPTIG00000016999) NT5DC1 (ENSPTIG00000016386) TSPYL4 (ENSPTIG00000006365) DSE (ENSPTIG00000015410) #22 ENSPTIG00000015377 #24 CALHM5 (ENSPTIG00000015346) #26 TRAPPC3L (ENSPTIG00000015246) #25 CALHM4 (ENSPTIG00000015112) #27 RWDD1 (ENSPTIG00000014973) #28 ENSPTIG00000014688 ENSPTIG00000014529 RSPH4A (ENSPTIG00000014297) #29 ZUP1 (ENSPTIG00000013533) #30 KPNA5 (ENSPTIG00000013503) #31 FAM162B (ENSPTIG00000013420) #32 GPRC6A (ENSPTIG00000013115) #33 RFX6 (ENSPTIG00000012468) #34 ENSPTIG00000012308 ROS1 (ENSPTIG00000011449) Cat MODERN SPECIES 236 REV3L (ENSFCAG00000028995) TRAF3IP2 (ENSFCAG00000000667) FYN (ENSFCAG00000023350) CCN6 (ENSFCAG00000006305) TUBE1 (ENSFCAG00000026151) FAM229B (ENSFCAG00000030116) LAMA4 (ENSFCAG00000006308) MARCKS (ENSFCAG00000042952) ENSFCAG00000051478 HDAC2 (ENSFCAG00000018836) HS3ST5 (ENSFCAG00000000523) FRK (ENSFCAG00000004043) NT5DC1 (ENSFCAG00000013415) COL10A1 (ENSFCAG00000040804) TSPYL4 (ENSFCAG00000013418) DSE (ENSFCAG00000023622) #22 ENSFCAG00000029592 #24 TRAPPC3L (ENSFCAG00000021987) #25 CALHM5 (ENSFCAG00000033745) #26 CALHM4 (ENSFCAG00000040211) #27 RWDD1 (ENSFCAG00000025905) #28 ENSFCAG00000034736 ENSFCAG00000047240 ENSFCAG00000052457 RSPH4A (ENSFCAG00000027641) #29 ZUP1 (ENSFCAG00000031494) #30 KPNA5 (ENSFCAG00000023588) #31 FAM162B (ENSFCAG00000037427) #32 GPRC6A (ENSFCAG00000044183) #33 RFX6 (ENSFCAG00000018903) #34 VGLL2 (ENSFCAG00000043286) Eulipotyphla ANCESTRAL SPECIES ENSGT00390000006522.b #22 Common shrew MODERN SPECIES 911 DSE (ENSSARG00000010799) #22 Hedgehog MODERN SPECIES 1395 DSE (ENSEEUG00000004504) #22 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Xenarthra ANCESTRAL SPECIES 168 ENSGT00940000162991 ENSGT00940000162821 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Armadillo MODERN SPECIES 2810 ENSDNOG00000047872 VWC2 (ENSDNOG00000024647) ENSDNOG00000049577 FRK (ENSDNOG00000010080) ENSDNOG00000007860 ENSDNOG00000030677 TSPYL4 (ENSDNOG00000042279) ENSDNOG00000039632 ENSDNOG00000046391 DSE (ENSDNOG00000045714) #22 ENSDNOG00000045345 #24 CALHM5 (ENSDNOG00000036788) #26 CALHM4 (ENSDNOG00000007514) #27 ENSDNOG00000007516 #28 ENSDNOG00000044348 ENSDNOG00000039401 ENSDNOG00000038517 ENSDNOG00000025447 RSPH4A (ENSDNOG00000001347) #29 ZUP1 (ENSDNOG00000044598) #30 KPNA5 (ENSDNOG00000005326) #31 FAM162B (ENSDNOG00000038676) #32 GPRC6A (ENSDNOG00000019148) #33 RFX6 (ENSDNOG00000019162) #34 VGLL2 (ENSDNOG00000044127) Sloth MODERN SPECIES 1133 DSE (ENSCHOG00000006486) #22 Afrotheria ANCESTRAL SPECIES 13 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Afrotheria_a ANCESTRAL SPECIES 13 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00940000163194 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000162991 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Elephant MODERN SPECIES 1 REV3L (ENSLAFG00000005929) TRAF3IP2 (ENSLAFG00000004974) FYN (ENSLAFG00000002604) CCN6 (ENSLAFG00000004071) TUBE1 (ENSLAFG00000004073) FAM229B (ENSLAFG00000030627) LAMA4 (ENSLAFG00000004076) ENSLAFG00000029012 RFPL4B (ENSLAFG00000021578) HDAC2 (ENSLAFG00000005566) HS3ST5 (ENSLAFG00000010686) FRK (ENSLAFG00000005589) COL10A1 (ENSLAFG00000022123) TSPYL4 (ENSLAFG00000010254) ENSLAFG00000027418 DSE (ENSLAFG00000009134) #22 ENSLAFG00000012702 #24 ENSLAFG00000017416 #24 CALHM5 (ENSLAFG00000008490) #26 TRAPPC3L (ENSLAFG00000008487) #25 CALHM4 (ENSLAFG00000027569) #27 ENSLAFG00000008170 #28 ENSLAFG00000026707 ENSLAFG00000028750 RSPH4A (ENSLAFG00000003514) #29 ZUP1 (ENSLAFG00000017345) #30 KPNA5 (ENSLAFG00000003824) #31 FAM162B (ENSLAFG00000003827) #32 GPRC6A (ENSLAFG00000003462) #33 RFX6 (ENSLAFG00000003465) #34 VGLL2 (ENSLAFG00000009803) Hyrax MODERN SPECIES 1031 DSE (ENSPCAG00000005041) #22 Tenrec MODERN SPECIES 1360 DSE (ENSETEG00000019078) #22 CALHM6 (ENSETEG00000019081) #24 TRAPPC3L (ENSETEG00000019083) #25 CALHM5 (ENSETEG00000019084) #26 RWDD1 (ENSETEG00000019085) #28 Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a.m #24 ENSGT01030000234610.a.a.n #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00940000160861.a ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a.m #24 ENSGT01030000234610.a.a.n #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00940000160861.a ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 Diprotodontia ANCESTRAL SPECIES 15 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a.m #24 ENSGT01030000234610.a.a.n #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00940000160861.a ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 Diprotodontia_a ANCESTRAL SPECIES 23 ENSGT00530000063320.B.eb ENSGT00530000063320.B.db ENSGT00940000156226 ENSGT00940000161944 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00390000017996.b ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a.m #24 ENSGT01030000234610.a.a.n #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00940000160861.a ENSGT00390000009168 #28 ENSGT00500000044869.a.a #29 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 koala MODERN SPECIES 216 FRK (ENSPCIG00000008683) NT5DC1 (ENSPCIG00000008684) ENSPCIG00000034146 DSE (ENSPCIG00000008687) #22 ENSPCIG00000008688 ENSPCIG00000008689 #24 ENSPCIG00000008693 #24 TRAPPC3L (ENSPCIG00000008694) #25 CALHM5 (ENSPCIG00000031293) #26 CALHM4 (ENSPCIG00000008698) #27 ENSPCIG00000023060 ENSPCIG00000023063 #28 RSPH4A (ENSPCIG00000023064) #29 ZUP1 (ENSPCIG00000023066) #30 KPNA5 (ENSPCIG00000023067) #31 ENSPCIG00000009100 RFX6 (ENSPCIG00000023071) #34 ENSPCIG00000031623 DCBLD1 (ENSPCIG00000023078) Common wonbat MODERN SPECIES 426 REV3L (ENSVURG00010022785) TRAF3IP2 (ENSVURG00010022795) FYN (ENSVURG00010022801) ENSVURG00010022817 CCN6 (ENSVURG00010022820) TUBE1 (ENSVURG00010022830) FAM229B (ENSVURG00010022837) LAMA4 (ENSVURG00010022847) ENSVURG00010022899 MARCKS (ENSVURG00010022906) HDAC2 (ENSVURG00010022910) HS3ST5 (ENSVURG00010022928) FRK (ENSVURG00010022934) NT5DC1 (ENSVURG00010022944) ENSVURG00010022951 DSE (ENSVURG00010022960) #22 ENSVURG00010022974 #25 CALHM5 (ENSVURG00010022978) #26 CALHM4 (ENSVURG00010022981) #27 ENSVURG00010022985 RWDD1 (ENSVURG00010022993) #28 RSPH4A (ENSVURG00010023005) #29 ENSVURG00010023011 #30 ENSVURG00010023013 #30 KPNA5 (ENSVURG00010023019) #31 GPRC6A (ENSVURG00010023032) #33 RFX6 (ENSVURG00010023038) #34 ENSVURG00010023044 ENSVURG00010023048 ENSVURG00010023052 DCBLD1 (ENSVURG00010023057) Wallaby MODERN SPECIES 2050 DSE (ENSMEUG00000001180) #22 Tasmanian devil MODERN SPECIES 3 REV3L (ENSSHAG00000006121) TRAF3IP2 (ENSSHAG00000009775) FYN (ENSSHAG00000010594) CCN6 (ENSSHAG00000013692) TUBE1 (ENSSHAG00000013871) FAM229B (ENSSHAG00000014011) LAMA4 (ENSSHAG00000014100) ENSSHAG00000030163 MARCKS (ENSSHAG00000032396) HDAC2 (ENSSHAG00000029979) HS3ST5 (ENSSHAG00000026218) ENSSHAG00000021743 FRK (ENSSHAG00000018366) ENSSHAG00000018580 NT5DC1 (ENSSHAG00000018559) DSE (ENSSHAG00000000534) #22 ENSSHAG00000025331 #24 ENSSHAG00000004138 #24 CALHM5 (ENSSHAG00000023597) #26 TRAPPC3L (ENSSHAG00000005649) #25 CALHM4 (ENSSHAG00000006568) #27 ENSSHAG00000025679 RWDD1 (ENSSHAG00000030217) #28 RSPH4A (ENSSHAG00000007508) #29 ZUP1 (ENSSHAG00000017118) #30 KPNA5 (ENSSHAG00000008042) #31 GPRC6A (ENSSHAG00000008754) #33 RFX6 (ENSSHAG00000009393) #34 ENSSHAG00000011540 DCBLD1 (ENSSHAG00000023740) GOPC (ENSSHAG00000013357) Opossum MODERN SPECIES 1 TUBE1 (ENSMODG00000017887) FAM229B (ENSMODG00000017886) LAMA4 (ENSMODG00000017881) MARCKS (ENSMODG00000045740) HDAC2 (ENSMODG00000017860) ENSMODG00000037190 HS3ST5 (ENSMODG00000036869) ENSMODG00000016446 ENSMODG00000042919 ENSMODG00000028476 ENSMODG00000038439 FRK (ENSMODG00000017852) NT5DC1 (ENSMODG00000017849) ENSMODG00000050348 ENSMODG00000017850 DSE (ENSMODG00000017846) #22 ENSMODG00000017842 #24 ENSMODG00000017841 #24 TRAPPC3L (ENSMODG00000023338) #25 CALHM5 (ENSMODG00000017840) #26 CALHM4 (ENSMODG00000017838) #27 ENSMODG00000005764 RWDD1 (ENSMODG00000036601) #28 RSPH4A (ENSMODG00000017836) #29 ZUP1 (ENSMODG00000017831) #30 KPNA5 (ENSMODG00000017826) #31 ENSMODG00000036617 GPRC6A (ENSMODG00000017819) #33 RFX6 (ENSMODG00000017815) #34 VGLL2 (ENSMODG00000017809) DCBLD1 (ENSMODG00000017807) Platypus MODERN SPECIES 11 TGFBRAP1 (ENSOANG00000010577) C2orf49 (ENSOANG00000014840) FHL2 (ENSOANG00000014839) NCK2 (ENSOANG00000014187) ECRG4 (ENSOANG00000044766) UXS1 (ENSOANG00000029305) ENSOANG00000051170 ST6GAL2 (ENSOANG00000011147) SLC5A7 (ENSOANG00000050883) MALL (ENSOANG00000013121) HDAC2 (ENSOANG00000003631) HS3ST5 (ENSOANG00000010980) FRK (ENSOANG00000029704) COL10A1 (ENSOANG00000044747) NT5DC1 (ENSOANG00000040723) DSE (ENSOANG00000050170) #22 ENSOANG00000045905 #26 CALHM5 (ENSOANG00000006298) #26 TRAPPC3L (ENSOANG00000006297) #25 ENSOANG00000038481 #24 RWDD1 (ENSOANG00000045892) #28 ENSOANG00000020699 ENSOANG00000012469 RSPH4A (ENSOANG00000012472) #29 ZUP1 (ENSOANG00000013491) #30 KPNA5 (ENSOANG00000038435) #31 RFX6 (ENSOANG00000004002) #34 VGLL2 (ENSOANG00000044125) ROS1 (ENSOANG00000012474) DCBLD1 (ENSOANG00000043449) GOPC (ENSOANG00000003691) Sauria ANCESTRAL SPECIES 1 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Archelosauria ANCESTRAL SPECIES 1 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Archosauria ANCESTRAL SPECIES 3 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 Aves ANCESTRAL SPECIES 10 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Neognathae ANCESTRAL SPECIES 2 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Galloanserae ANCESTRAL SPECIES 2 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Anatidae ANCESTRAL SPECIES ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Duck DUPLICATION Duck MODERN SPECIES 21 ENSAPLG00000028742 ENSAPLG00000018317 ENSAPLG00000025315 ENSAPLG00000015277 FYN (ENSAPLG00000014917) CCN6 (ENSAPLG00000014838) TUBE1 (ENSAPLG00000014557) LAMA4 (ENSAPLG00000013937) ENSAPLG00000021734 MARCKS (ENSAPLG00000030242) HDAC2 (ENSAPLG00000006926) HS3ST5 (ENSAPLG00000006908) FRK (ENSAPLG00000009906) ENSAPLG00000010244 NT5DC1 (ENSAPLG00000010010) ENSAPLG00000010250 #22 CALHM6 (ENSAPLG00000010323) #24 ENSAPLG00000030127 #22 TRAPPC3L (ENSAPLG00000010373) #25 CALHM4 (ENSAPLG00000010403) #27 RWDD1 (ENSAPLG00000010404) #28 ENSAPLG00000004407 ZUP1 (ENSAPLG00000004367) #30 KPNA5 (ENSAPLG00000003395) #31 FAM162B (ENSAPLG00000025053) #32 ENSAPLG00000003079 #33 ENSAPLG00000024644 #33 RFX6 (ENSAPLG00000002929) #34 VGLL2 (ENSAPLG00000027398) ROS1 (ENSAPLG00000002159) DCBLD1 (ENSAPLG00000001269) Duck MODERN SPECIES 21 ENSAPLG00000000593 GOPC (ENSAPLG00000000612) DCBLD1 (ENSAPLG00000001269) ROS1 (ENSAPLG00000002159) VGLL2 (ENSAPLG00000027398) RFX6 (ENSAPLG00000002929) #34 ENSAPLG00000024644 #33 ENSAPLG00000003079 #33 FAM162B (ENSAPLG00000025053) #32 KPNA5 (ENSAPLG00000003395) #31 ZUP1 (ENSAPLG00000004367) #30 ENSAPLG00000004407 RWDD1 (ENSAPLG00000010404) #28 CALHM4 (ENSAPLG00000010403) #27 TRAPPC3L (ENSAPLG00000010373) #25 ENSAPLG00000030127 #22 CALHM6 (ENSAPLG00000010323) #24 ENSAPLG00000010250 #22 NT5DC1 (ENSAPLG00000010010) ENSAPLG00000010244 FRK (ENSAPLG00000009906) HS3ST5 (ENSAPLG00000006908) HDAC2 (ENSAPLG00000006926) MARCKS (ENSAPLG00000030242) ENSAPLG00000021734 LAMA4 (ENSAPLG00000013937) TUBE1 (ENSAPLG00000014557) CCN6 (ENSAPLG00000014838) FYN (ENSAPLG00000014917) ENSAPLG00000015277 ENSAPLG00000025315 Pink-footed goose MODERN SPECIES 43 RPF2 (ENSABRG00000000989) SLC16A10 (ENSABRG00000000975) MFSD4B (ENSABRG00000000920) REV3L (ENSABRG00000000848) ENSABRG00000000776 FYN (ENSABRG00000000747) CCN6 (ENSABRG00000000698) TUBE1 (ENSABRG00000000661) LAMA4 (ENSABRG00000000629) MARCKS (ENSABRG00000000577) HDAC2 (ENSABRG00000000551) HS3ST5 (ENSABRG00000000532) FRK (ENSABRG00000000463) ENSABRG00000000444 NT5DC1 (ENSABRG00000000333) DSE (ENSABRG00000000313) #22 CALHM6 (ENSABRG00000000306) #24 CALHM5 (ENSABRG00000000291) #26 TRAPPC3L (ENSABRG00000000277) #25 CALHM4 (ENSABRG00000000249) #27 RWDD1 (ENSABRG00000000238) #28 Phasianidae ANCESTRAL SPECIES 3 ENSGT00940000157966.a ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723.g ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Japanese quail MODERN SPECIES 21 SLC16A10 (ENSCJPG00005009241) MFSD4B (ENSCJPG00005009240) REV3L (ENSCJPG00005009239) ENSCJPG00005009238 FYN (ENSCJPG00005009237) CCN6 (ENSCJPG00005009235) TUBE1 (ENSCJPG00005009234) LAMA4 (ENSCJPG00005009233) MARCKS (ENSCJPG00005009226) ENSCJPG00005009224 HDAC2 (ENSCJPG00005009223) HS3ST5 (ENSCJPG00005009222) FRK (ENSCJPG00005009218) ENSCJPG00005009217 NT5DC1 (ENSCJPG00005009216) DSE (ENSCJPG00005009215) #22 CALHM6 (ENSCJPG00005009214) #24 CALHM5 (ENSCJPG00005009213) #26 TRAPPC3L (ENSCJPG00005009212) #25 CALHM4 (ENSCJPG00005009211) #27 RWDD1 (ENSCJPG00005009210) #28 ENSCJPG00005009209 ENSCJPG00005009208 ZUP1 (ENSCJPG00005009207) #30 FAM162B (ENSCJPG00005009206) #32 KPNA5 (ENSCJPG00005009205) #31 GPRC6A (ENSCJPG00005009204) #33 RFX6 (ENSCJPG00005009203) #34 VGLL2 (ENSCJPG00005009201) ENSCJPG00005009200 ROS1 (ENSCJPG00005009199) Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00940000157966.a ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723.g ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Chicken MODERN SPECIES 22 REV3L (ENSGALG00010013664) TRAF3IP2 (ENSGALG00010013651) FYN (ENSGALG00010013604) CCN6 (ENSGALG00010013521) ENSGALG00010015164 TUBE1 (ENSGALG00010013508) LAMA4 (ENSGALG00010013458) ENSGALG00010013411 MARCKS (ENSGALG00010013402) HDAC2 (ENSGALG00010013392) HS3ST5 (ENSGALG00010013363) ENSGALG00010013350 FRK (ENSGALG00010014602) COL10A1 (ENSGALG00010012719) NT5DC1 (ENSGALG00010012690) DSE (ENSGALG00010012650) #22 FAM26F (ENSGALG00010014873) #24 FAM26E (ENSGALG00010014866) #26 FAM26D (ENSGALG00010014851) #27 TRAPPC3L (ENSGALG00010014830) #25 RWDD1 (ENSGALG00010014812) #28 ENSGALG00010014764 ZUP1 (ENSGALG00010014734) #30 KPNA5 (ENSGALG00010014707) #31 FAM162B (ENSGALG00010014653) #32 GPRC6A (ENSGALG00010014624) #33 RFX6 (ENSGALG00010012330) #34 VGLL2 (ENSGALG00010012376) ROS1 (ENSGALG00010012360) DCBLD1 (ENSGALG00010012354) GOPC (ENSGALG00010012341) Turkey MODERN SPECIES 11 ENSMGAG00000018204 ENSMGAG00000013519 ENSMGAG00000013520 ENSMGAG00000013523 ENSMGAG00000013524 OSTM1 (ENSMGAG00000013498) NR2E1 (ENSMGAG00000013495) SNX3 (ENSMGAG00000013494) AFG1L (ENSMGAG00000013490) ENSMGAG00000013379 #28 ENSMGAG00000018692 ENSMGAG00000013384 #24 CALHM5 (ENSMGAG00000019395) #26 ENSMGAG00000013381 #25 ENSMGAG00000013380 #27 ENSMGAG00000013385 #22 ENSMGAG00000013382 ENSMGAG00000013387 ENSMGAG00000022386 ENSMGAG00000013388 ENSMGAG00000021850 ENSMGAG00000013395 ENSMGAG00000013396 ENSMGAG00000021302 ENSMGAG00000022379 LAMA4 (ENSMGAG00000013404) ENSMGAG00000017970 ENSMGAG00000013411 ENSMGAG00000013414 ENSMGAG00000022768 FYN (ENSMGAG00000013415) Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Neognathae_c ANCESTRAL SPECIES 5 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Golden eagle MODERN SPECIES 11 MFSD4B (ENSACCG00020006317) REV3L (ENSACCG00020006335) ENSACCG00020006358 FYN (ENSACCG00020006370) CCN6 (ENSACCG00020006390) ENSACCG00020006395 ENSACCG00020006403 ENSACCG00020006409 LAMA4 (ENSACCG00020006424) MARCKS (ENSACCG00020006456) HDAC2 (ENSACCG00020006464) HS3ST5 (ENSACCG00020006476) FRK (ENSACCG00020006485) NT5DC1 (ENSACCG00020006495) ENSACCG00020006507 DSE (ENSACCG00020006515) #22 ENSACCG00020006525 #24 TRAPPC3L (ENSACCG00020006542) #25 CALHM5 (ENSACCG00020006553) #26 CALHM4 (ENSACCG00020006561) #27 RWDD1 (ENSACCG00020006571) #28 ENSACCG00020006579 ZUP1 (ENSACCG00020006610) #30 KPNA5 (ENSACCG00020006648) #31 FAM162B (ENSACCG00020006669) #32 GPRC6A (ENSACCG00020006680) #33 RFX6 (ENSACCG00020006700) #34 VGLL2 (ENSACCG00020006724) ENSACCG00020006739 CEP57L1 (ENSACCG00020006757) SESN1 (ENSACCG00020006789) Kakapo MODERN SPECIES 23 MFSD4B (ENSSHBG00005017299) ENSSHBG00005017294 ENSSHBG00005017288 ENSSHBG00005017283 FYN (ENSSHBG00005017280) CCN6 (ENSSHBG00005017277) ENSSHBG00005017274 TUBE1 (ENSSHBG00005017269) LAMA4 (ENSSHBG00005004609) MARCKS (ENSSHBG00005003980) HDAC2 (ENSSHBG00005003956) HS3ST5 (ENSSHBG00005003938) FRK (ENSSHBG00005003903) ENSSHBG00005003874 NT5DC1 (ENSSHBG00005003851) DSE (ENSSHBG00005003820) #22 CALHM6 (ENSSHBG00005003805) #24 CALHM5 (ENSSHBG00005003799) #26 TRAPPC3L (ENSSHBG00005003784) #25 CALHM4 (ENSSHBG00005003749) #27 RWDD1 (ENSSHBG00005003718) #28 ZUP1 (ENSSHBG00005003702) #30 KPNA5 (ENSSHBG00005003578) #31 FAM162B (ENSSHBG00005003515) #32 GPRC6A (ENSSHBG00005003502) #33 RFX6 (ENSSHBG00005003482) #34 VGLL2 (ENSSHBG00005003458) ROS1 (ENSSHBG00005003030) DCBLD1 (ENSSHBG00005002782) GOPC (ENSSHBG00005002757) ENSSHBG00005002743 Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Passeroidea ANCESTRAL SPECIES ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Common canary MODERN SPECIES 1 GTF3C6 (ENSSCAG00000000034) RPF2 (ENSSCAG00000000033) SLC16A10 (ENSSCAG00000000026) MFSD4B (ENSSCAG00000000025) REV3L (ENSSCAG00000000019) ENSSCAG00000000009 FYN (ENSSCAG00000000004) CCN6 (ENSSCAG00000014994) TUBE1 (ENSSCAG00000014989) LAMA4 (ENSSCAG00000014967) HDAC2 (ENSSCAG00000014953) HS3ST5 (ENSSCAG00000014948) FRK (ENSSCAG00000014876) ENSSCAG00000014847 NT5DC1 (ENSSCAG00000014841) DSE (ENSSCAG00000014836) #22 CALHM6 (ENSSCAG00000014832) #24 CALHM5 (ENSSCAG00000014827) #26 TRAPPC3L (ENSSCAG00000014820) #25 CALHM4 (ENSSCAG00000014792) #27 RWDD1 (ENSSCAG00000014762) #28 ZUP1 (ENSSCAG00000014748) #30 KPNA5 (ENSSCAG00000014738) #31 FAM162B (ENSSCAG00000014732) #32 GPRC6A (ENSSCAG00000014730) #33 RFX6 (ENSSCAG00000014718) #34 VGLL2 (ENSSCAG00000014711) ROS1 (ENSSCAG00000014691) DCBLD1 (ENSSCAG00000014671) GOPC (ENSSCAG00000014666) ENSSCAG00000014659 Zebra finch MODERN SPECIES 23 REV3L (ENSTGUG00000012020) ENSTGUG00000019391 ENSTGUG00000012013 FYN (ENSTGUG00000011998) CCN6 (ENSTGUG00000024640) ENSTGUG00000011997 TUBE1 (ENSTGUG00000011993) LAMA4 (ENSTGUG00000011973) MARCKS (ENSTGUG00000026006) HDAC2 (ENSTGUG00000011964) HS3ST5 (ENSTGUG00000011963) ENSTGUG00000028765 FRK (ENSTGUG00000011957) NT5DC1 (ENSTGUG00000011946) ENSTGUG00000011952 DSE (ENSTGUG00000011943) #22 CALHM6 (ENSTGUG00000011941) #24 TRAPPC3L (ENSTGUG00000011937) #25 CALHM5 (ENSTGUG00000011940) #26 RWDD1 (ENSTGUG00000011932) #28 ZUP1 (ENSTGUG00000011930) #30 KPNA5 (ENSTGUG00000011928) #31 FAM162B (ENSTGUG00000024738) #32 GPRC6A (ENSTGUG00000011925) #33 RFX6 (ENSTGUG00000011924) #34 VGLL2 (ENSTGUG00000011922) ROS1 (ENSTGUG00000011909) DCBLD1 (ENSTGUG00000011905) GOPC (ENSTGUG00000011901) ENSTGUG00000011898 NUS1 (ENSTGUG00000011892) Medium ground finch MODERN SPECIES 9 MFSD4B (ENSGFOG00000002885) REV3L (ENSGFOG00000002896) ENSGFOG00000002949 ENSGFOG00000002969 FYN (ENSGFOG00000002985) CCN6 (ENSGFOG00000003008) TUBE1 (ENSGFOG00000003060) LAMA4 (ENSGFOG00000003411) ENSGFOG00000007518 HDAC2 (ENSGFOG00000007522) HS3ST5 (ENSGFOG00000007531) FRK (ENSGFOG00000007538) NT5DC1 (ENSGFOG00000007552) ENSGFOG00000007579 ENSGFOG00000007583 DSE (ENSGFOG00000007589) #22 CALHM6 (ENSGFOG00000007593) #24 TRAPPC3L (ENSGFOG00000007597) #25 CALHM5 (ENSGFOG00000007606) #26 CALHM4 (ENSGFOG00000007609) #27 RWDD1 (ENSGFOG00000007640) #28 ZUP1 (ENSGFOG00000007669) #30 KPNA5 (ENSGFOG00000007745) #31 FAM162B (ENSGFOG00000007757) #32 GPRC6A (ENSGFOG00000007765) #33 RFX6 (ENSGFOG00000007776) #34 VGLL2 (ENSGFOG00000007798) ROS1 (ENSGFOG00000007810) DCBLD1 (ENSGFOG00000007857) GOPC (ENSGFOG00000007881) ENSGFOG00000007920 Flycatcher MODERN SPECIES 21 RPF2 (ENSFALG00000010816) SLC16A10 (ENSFALG00000010838) MFSD4B (ENSFALG00000010844) REV3L (ENSFALG00000010846) ENSFALG00000010853 FYN (ENSFALG00000010875) CCN6 (ENSFALG00000028771) TUBE1 (ENSFALG00000010959) LAMA4 (ENSFALG00000010965) HDAC2 (ENSFALG00000010975) HS3ST5 (ENSFALG00000010977) FRK (ENSFALG00000010983) ENSFALG00000028957 ENSFALG00000010995 ENSFALG00000023706 DSE (ENSFALG00000011001) #22 ENSFALG00000010999 #24 ENSFALG00000011005 #24 TRAPPC3L (ENSFALG00000011010) #25 CALHM5 (ENSFALG00000023025) #26 CALHM4 (ENSFALG00000011017) #27 ENSFALG00000028887 RWDD1 (ENSFALG00000024864) #28 ZUP1 (ENSFALG00000011032) #30 KPNA5 (ENSFALG00000011039) #31 FAM162B (ENSFALG00000011046) #32 GPRC6A (ENSFALG00000011050) #33 RFX6 (ENSFALG00000011057) #34 VGLL2 (ENSFALG00000011071) ROS1 (ENSFALG00000011085) DCBLD1 (ENSFALG00000011109) Great tit MODERN SPECIES 22 RPF2 (ENSPMJG00000015289) SLC16A10 (ENSPMJG00000015288) MFSD4B (ENSPMJG00000015287) REV3L (ENSPMJG00000015286) ENSPMJG00000015285 FYN (ENSPMJG00000015284) CCN6 (ENSPMJG00000015281) TUBE1 (ENSPMJG00000015280) LAMA4 (ENSPMJG00000014201) MARCKS (ENSPMJG00000014178) HDAC2 (ENSPMJG00000014173) HS3ST5 (ENSPMJG00000014171) FRK (ENSPMJG00000014147) ENSPMJG00000014145 NT5DC1 (ENSPMJG00000014143) DSE (ENSPMJG00000014142) #22 CALHM6 (ENSPMJG00000014108) #24 TRAPPC3L (ENSPMJG00000014105) #25 CALHM5 (ENSPMJG00000014102) #26 CALHM4 (ENSPMJG00000014100) #27 RWDD1 (ENSPMJG00000014098) #28 ZUP1 (ENSPMJG00000014097) #30 KPNA5 (ENSPMJG00000014094) #31 FAM162B (ENSPMJG00000014092) #32 GPRC6A (ENSPMJG00000014090) #33 RFX6 (ENSPMJG00000014077) #34 VGLL2 (ENSPMJG00000014058) ROS1 (ENSPMJG00000014055) DCBLD1 (ENSPMJG00000014053) GOPC (ENSPMJG00000014050) ENSPMJG00000014049 African ostrich MODERN SPECIES 837 HDAC2 (ENSSCUG00000017413) HS3ST5 (ENSSCUG00000017412) FRK (ENSSCUG00000017408) ENSSCUG00000017407 NT5DC1 (ENSSCUG00000017405) DSE (ENSSCUG00000017404) #22 CALHM6 (ENSSCUG00000017403) #24 CALHM5 (ENSSCUG00000017402) #26 TRAPPC3L (ENSSCUG00000017401) #25 CALHM4 (ENSSCUG00000017400) #27 RWDD1 (ENSSCUG00000017398) #28 ENSSCUG00000017396 ZUP1 (ENSSCUG00000017391) #30 KPNA5 (ENSSCUG00000017388) #31 ENSSCUG00000017386 GPRC6A (ENSSCUG00000017385) #33 RFX6 (ENSSCUG00000017383) #34 ROS1 (ENSSCUG00000017377) DCBLD1 (ENSSCUG00000017375) GOPC (ENSSCUG00000017372) ENSSCUG00000017369 Australian saltwater crocodile MODERN SPECIES 38 RPF2 (ENSCPRG00005001956) SLC16A10 (ENSCPRG00005001963) MFSD4B (ENSCPRG00005001968) REV3L (ENSCPRG00005001980) ENSCPRG00005001997 FYN (ENSCPRG00005002011) CCN6 (ENSCPRG00005002029) ENSCPRG00005002036 TUBE1 (ENSCPRG00005002040) LAMA4 (ENSCPRG00005002233) HDAC2 (ENSCPRG00005003350) HS3ST5 (ENSCPRG00005003370) FRK (ENSCPRG00005003403) NT5DC1 (ENSCPRG00005003414) ENSCPRG00005003419 DSE (ENSCPRG00005003429) #22 CALHM6 (ENSCPRG00005003433) #24 TRAPPC3L (ENSCPRG00005003437) #25 CALHM5 (ENSCPRG00005003444) #26 ENSCPRG00005003445 #25 CALHM4 (ENSCPRG00005003448) #27 RWDD1 (ENSCPRG00005003459) #28 ENSCPRG00005003489 DHRS1 (ENSCPRG00005003677) ZUP1 (ENSCPRG00005003679) #30 KPNA5 (ENSCPRG00005003739) #31 FAM162B (ENSCPRG00005004198) #32 GPRC6A (ENSCPRG00005004201) #33 RFX6 (ENSCPRG00005004215) #34 VGLL2 (ENSCPRG00005004268) ROS1 (ENSCPRG00005004284) Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000163923.f ENSGT00940000163923.e ENSGT00940000163282.j ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b.n #26 ENSGT01030000234610.a.b.m #26 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00940000156772.gb ENSGT00940000156772.fb ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Testudinoidea ANCESTRAL SPECIES 32 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b.n #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b.m #26 ENSGT00390000009168 #28 ENSGT00940000156772.gb ENSGT00940000156772.fb.a ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Emydidae ANCESTRAL SPECIES 46 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.b.n #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b.m #26 ENSGT00390000009168 #28 ENSGT00940000156772.gb ENSGT00940000156772.fb.b.a ENSGT00940000156772.fb.a ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Three-toed box turtle MODERN SPECIES 15 SLC16A10 (ENSTMTG00000022446) MFSD4B (ENSTMTG00000022442) REV3L (ENSTMTG00000022346) ENSTMTG00000022304 FYN (ENSTMTG00000022299) CCN6 (ENSTMTG00000022295) ENSTMTG00000022292 TUBE1 (ENSTMTG00000022289) LAMA4 (ENSTMTG00000022279) MARCKS (ENSTMTG00000022273) HDAC2 (ENSTMTG00000022269) HS3ST5 (ENSTMTG00000022267) FRK (ENSTMTG00000022263) ENSTMTG00000022259 NT5DC1 (ENSTMTG00000022236) DSE (ENSTMTG00000022224) #22 ENSTMTG00000022220 #26 TRAPPC3L (ENSTMTG00000022216) #25 ENSTMTG00000022211 #26 ENSTMTG00000022205 #25 RWDD1 (ENSTMTG00000022203) #28 ENSTMTG00000022196 ENSTMTG00000022191 painted turtle MODERN SPECIES 814 CCDC34 (ENSCPBG00000003069) ENSCPBG00000003039 LGR4 (ENSCPBG00000002979) LIN7C (ENSCPBG00000002933) BDNF (ENSCPBG00000002914) HS3ST5 (ENSCPBG00000002904) FRK (ENSCPBG00000002822) ENSCPBG00000002806 NT5DC1 (ENSCPBG00000002795) DSE (ENSCPBG00000002773) #22 ENSCPBG00000002747 #25 RWDD1 (ENSCPBG00000002732) #28 ENSCPBG00000002672 ENSCPBG00000002500 ENSCPBG00000002434 ENSCPBG00000002414 DHRS1 (ENSCPBG00000002365) ZUP1 (ENSCPBG00000002353) #30 KPNA5 (ENSCPBG00000002335) #31 FAM162B (ENSCPBG00000002325) #32 GPRC6A (ENSCPBG00000002316) #33 NPTN (ENSCPBG00000002291) CD276 (ENSCPBG00000002269) ENSCPBG00000002246 Testudinidae ANCESTRAL SPECIES 10 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b.n #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b.m #26 ENSGT00390000009168 #28 ENSGT00940000156772.gb ENSGT00940000156772.fb.a ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 Goode s thornscrub tortoise MODERN SPECIES 17 SLC16A10 (ENSGEVG00005012583) MFSD4B (ENSGEVG00005012609) REV3L (ENSGEVG00005012666) ENSGEVG00005012800 FYN (ENSGEVG00005012917) CCN6 (ENSGEVG00005012988) ENSGEVG00005013062 TUBE1 (ENSGEVG00005013110) LAMA4 (ENSGEVG00005013254) MARCKS (ENSGEVG00005014084) HDAC2 (ENSGEVG00005014147) HS3ST5 (ENSGEVG00005014212) FRK (ENSGEVG00005014318) NT5DC1 (ENSGEVG00005014775) ENSGEVG00005015741 DSE (ENSGEVG00005015769) #22 ENSGEVG00005015788 #24 ENSGEVG00005015807 #24 ENSGEVG00005015824 #26 TRAPPC3L (ENSGEVG00005015848) #25 ENSGEVG00005015884 #26 ENSGEVG00005015917 #25 RWDD1 (ENSGEVG00005015958) #28 ENSGEVG00005015987 ENSGEVG00005016048 DHRS1 (ENSGEVG00005016217) ZUP1 (ENSGEVG00005016262) #30 KPNA5 (ENSGEVG00005016291) #31 FAM162B (ENSGEVG00005016336) #32 GPRC6A (ENSGEVG00005016365) #33 RFX6 (ENSGEVG00005016425) #34 Abingdon island giant tortoise MODERN SPECIES 650 DSE (ENSCABG00000015800) #22 CALHM6 (ENSCABG00000015797) #24 Chinese turtle MODERN SPECIES 1101 SLC16A10 (ENSPSIG00000015031) MFSD4B (ENSPSIG00000003739) REV3L (ENSPSIG00000003779) ENSPSIG00000003815 FYN (ENSPSIG00000003826) CCN6 (ENSPSIG00000004042) TUBE1 (ENSPSIG00000004054) LAMA4 (ENSPSIG00000004066) ENSPSIG00000001214 MARCKS (ENSPSIG00000004404) HDAC2 (ENSPSIG00000004413) HS3ST5 (ENSPSIG00000004541) FRK (ENSPSIG00000004668) NT5DC1 (ENSPSIG00000004784) ENSPSIG00000004859 DSE (ENSPSIG00000004879) #22 ENSPSIG00000004992 #24 ENSPSIG00000005155 #24 TRAPPC3L (ENSPSIG00000005260) #25 CALHM5 (ENSPSIG00000005270) #26 RWDD1 (ENSPSIG00000005283) #28 ENSPSIG00000005405 ENSPSIG00000005520 ENSPSIG00000005761 Lepidosauria ANCESTRAL SPECIES ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.a ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT01030000234610.a.b #26 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 Episquamata ANCESTRAL SPECIES ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 ENSGT00390000003223 ENSGT00390000015655.b Toxicofera ANCESTRAL SPECIES ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 ENSGT00390000003223 Elapidae ANCESTRAL SPECIES ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168.cc.a #28 ENSGT00940000156772.pb.b ENSGT00940000157797 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535.l ENSGT00390000003223 ENSGT00390000015655.b ENSGT00620000087993.a.a Elapidae_a ANCESTRAL SPECIES 6 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b.d ENSGT00940000160119.b.c ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168.cc.a #28 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b.d ENSGT00940000160119.b.c ENSGT00940000155723 ENSGT00940000159970 ENSGT00960000189563.a ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168.cc.a #28 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 876 ENSNSUG00000006319 #22 ENSNSUG00000006318 #24 ENSNSUG00000006317 #25 Mainland tiger snake MODERN SPECIES 877 ENSNSUG00000006322 #22 ENSNSUG00000006321 #24 ENSNSUG00000006320 #25 Eastern brown snake MODERN SPECIES 4 MFSD4B (ENSPTXG00000014147) REV3L (ENSPTXG00000014034) ENSPTXG00000014027 FYN (ENSPTXG00000014022) ENSPTXG00000014021 ENSPTXG00000014019 TUBE1 (ENSPTXG00000014018) LAMA4 (ENSPTXG00000014017) ENSPTXG00000014015 MARCKS (ENSPTXG00000014014) HDAC2 (ENSPTXG00000014011) HS3ST5 (ENSPTXG00000014009) FRK (ENSPTXG00000014008) ENSPTXG00000014007 NT5DC1 (ENSPTXG00000014006) DSE (ENSPTXG00000014005) #22 CALHM6 (ENSPTXG00000014004) #24 TRAPPC3L (ENSPTXG00000014003) #25 ENSPTXG00000014002 #25 RWDD1 (ENSPTXG00000014001) #28 Blue-lipped sea krait MODERN SPECIES 10508 ENSLLTG00000010502 #22 Indian cobra MODERN SPECIES RPF2 (ENSNNAG00000000509) SLC16A10 (ENSNNAG00000000497) MFSD4B (ENSNNAG00000000483) REV3L (ENSNNAG00000000449) ENSNNAG00000000428 FYN (ENSNNAG00000000407) CCN6 (ENSNNAG00000000390) TUBE1 (ENSNNAG00000000365) LAMA4 (ENSNNAG00000000292) MARCKS (ENSNNAG00000000279) HDAC2 (ENSNNAG00000000273) HS3ST5 (ENSNNAG00000000269) FRK (ENSNNAG00000000261) ENSNNAG00000000244 NT5DC1 (ENSNNAG00000006145) DSE (ENSNNAG00000006130) #22 CALHM6 (ENSNNAG00000006117) #24 TRAPPC3L (ENSNNAG00000006090) #25 ENSNNAG00000006065 RWDD1 (ENSNNAG00000006016) #28 ENSNNAG00000005994 ENSNNAG00000005971 ENSNNAG00000005915 ENSNNAG00000005895 ENSNNAG00000005723 ENSNNAG00000005682 ZUP1 (ENSNNAG00000005640) #30 KPNA5 (ENSNNAG00000005601) #31 GPRC6A (ENSNNAG00000005575) #33 RFX6 (ENSNNAG00000005505) #34 VGLL2 (ENSNNAG00000005489) Lizard MODERN SPECIES ENSACAG00000039863 ENSACAG00000041330 ENSACAG00000037386 MARCKS (ENSACAG00000012165) HDAC2 (ENSACAG00000012174) ENSACAG00000037660 ENSACAG00000045149 HS3ST5 (ENSACAG00000012310) ENSACAG00000028800 ENSACAG00000025786 ENSACAG00000025602 ENSACAG00000044190 FRK (ENSACAG00000012316) COL10A1 (ENSACAG00000012503) ENSACAG00000012457 DSE (ENSACAG00000013791) #22 CALHM6 (ENSACAG00000035788) #24 TRAPPC3L (ENSACAG00000040856) #25 RWDD1 (ENSACAG00000013868) #28 ENSACAG00000029503 ENSACAG00000041992 ENSACAG00000013979 ENSACAG00000042843 ENSACAG00000013906 ENSACAG00000028542 ENSACAG00000039059 ZUP1 (ENSACAG00000013995) #30 KPNA5 (ENSACAG00000014041) #31 FAM162B (ENSACAG00000036825) #32 GPRC6A (ENSACAG00000014169) #33 RFX6 (ENSACAG00000014185) #34 Laterata ANCESTRAL SPECIES 4 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119.b ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00900000143015 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000163953 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT00390000003880.b.b #25 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT01050000244950.a.a.b #31 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 ENSGT00390000003223 ENSGT00390000015655.b Common wall lizard MODERN SPECIES 11 ENSPMRG00000003467 FYN (ENSPMRG00000003480) ENSPMRG00000003488 ENSPMRG00000003491 TUBE1 (ENSPMRG00000003497) LAMA4 (ENSPMRG00000003793) ENSPMRG00000005961 MARCKS (ENSPMRG00000005971) ENSPMRG00000005981 HDAC2 (ENSPMRG00000005993) HS3ST5 (ENSPMRG00000006020) ENSPMRG00000006026 FRK (ENSPMRG00000006034) NT5DC1 (ENSPMRG00000006051) ENSPMRG00000006068 DSE (ENSPMRG00000006073) #22 CALHM6 (ENSPMRG00000006078) #24 TRAPPC3L (ENSPMRG00000006082) #25 RWDD1 (ENSPMRG00000006088) #28 ENSPMRG00000006121 ENSPMRG00000006159 ENSPMRG00000006165 ENSPMRG00000006182 #31 ENSPMRG00000006208 #32 GPRC6A (ENSPMRG00000006219) #33 RFX6 (ENSPMRG00000006227) #34 DCBLD1 (ENSPMRG00000006247) ENSPMRG00000006271 GOPC (ENSPMRG00000006277) ENSPMRG00000006290 SLC35F1 (ENSPMRG00000006298) Argentine black and white tegu MODERN SPECIES 2 MFSD4B (ENSSMRG00000012977) REV3L (ENSSMRG00000012740) ENSSMRG00000012733 FYN (ENSSMRG00000012730) CCN6 (ENSSMRG00000012721) TUBE1 (ENSSMRG00000012720) LAMA4 (ENSSMRG00000012719) ENSSMRG00000012697 MARCKS (ENSSMRG00000012654) HDAC2 (ENSSMRG00000012652) HS3ST5 (ENSSMRG00000012651) FRK (ENSSMRG00000012619) ENSSMRG00000012599 COL10A1 (ENSSMRG00000012598) NT5DC1 (ENSSMRG00000012597) DSE (ENSSMRG00000012596) #22 CALHM6 (ENSSMRG00000012565) #24 TRAPPC3L (ENSSMRG00000012562) #25 RWDD1 (ENSSMRG00000012560) #28 ENSSMRG00000012552 ENSSMRG00000012525 ENSSMRG00000012524 ENSSMRG00000012522 ENSSMRG00000012521 ZUP1 (ENSSMRG00000012520) #30 KPNA5 (ENSSMRG00000012499) #31 FAM162B (ENSSMRG00000012498) #32 GPRC6A (ENSSMRG00000012497) #33 RFX6 (ENSSMRG00000012496) #34 ENSSMRG00000012485 VGLL2 (ENSSMRG00000012484) tuatara MODERN SPECIES 968 FRK (ENSSPUG00000002986) ENSSPUG00000003042 COL10A1 (ENSSPUG00000003085) DSE (ENSSPUG00000003100) #22 TRAPPC3L (ENSSPUG00000003108) #25 CALHM5 (ENSSPUG00000003123) #26 ENSSPUG00000003132 #28 ENSSPUG00000003140 #28 Anura ANCESTRAL SPECIES 8 ENSGT00390000007279 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164855 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000163953 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT01030000234610.a.a #24 ENSGT01030000234610.a.b #26 ENSGT00390000003880.b.b #25 ENSGT01030000234610.b.b #27 ENSGT00390000009168 #28 ENSGT00940000156772 ENSGT00390000008232 #30 ENSGT00640000091497.b #32 ENSGT00940000158416 #33 ENSGT00940000166171.b ENSGT01050000244879.b.a.b.b #34 ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 Frog MODERN SPECIES 5 ccn6 (ENSXETG00000040962) tube1 (ENSXETG00000011177) ENSXETG00000049076 lama4 (ENSXETG00000007336) marcks (ENSXETG00000027751) hdac2 (ENSXETG00000007339) hs3st5 (ENSXETG00000020230) ENSXETG00000048366 ENSXETG00000042926 ENSXETG00000043493 ENSXETG00000044597 cfap206 (ENSXETG00000006172) frk (ENSXETG00000006166) col10a1 (ENSXETG00000033031) nt5dc1 (ENSXETG00000034706) dse (ENSXETG00000032776) #22 calhm6 (ENSXETG00000033644) #24 calhm5 (ENSXETG00000044076) #26 trappc3l (ENSXETG00000031870) #25 calhm4 (ENSXETG00000030384) #27 birc7 (ENSXETG00000015707) rwdd1 (ENSXETG00000014077) #28 XB5843062 [provisional:sult3a1] (ENSXETG00000030056) zup1 (ENSXETG00000014074) #30 ENSXETG00000046674 fam162b (ENSXETG00000036478) #32 XB991396 [provisional:gprc6a] (ENSXETG00000032107) #33 gprc6a (ENSXETG00000032935) ENSXETG00000049478 rfx6 (ENSXETG00000033810) #34 vgll2 (ENSXETG00000014041) Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000017428 ENSLLEG00000017409 ENSLLEG00000017379 MARCKS (ENSLLEG00000017344) ENSLLEG00000017300 ENSLLEG00000017275 HDAC2 (ENSLLEG00000016537) ENSLLEG00000016423 HS3ST5 (ENSLLEG00000016380) ENSLLEG00000016355 ENSLLEG00000016334 ENSLLEG00000016271 FRK (ENSLLEG00000016095) ENSLLEG00000016041 NT5DC1 (ENSLLEG00000015951) DSE (ENSLLEG00000015907) #22 CALHM6 (ENSLLEG00000015877) #24 CALHM5 (ENSLLEG00000015832) #26 TRAPPC3L (ENSLLEG00000015749) #25 CALHM4 (ENSLLEG00000015712) #27 RWDD1 (ENSLLEG00000015539) #28 ENSLLEG00000015309 ENSLLEG00000015174 ZUP1 (ENSLLEG00000014981) #30 ENSLLEG00000014949 FAM162B (ENSLLEG00000014905) #32 GPRC6A (ENSLLEG00000014835) #33 ENSLLEG00000014772 ENSLLEG00000014686 ENSLLEG00000014658 ENSLLEG00000014601 Coelacanth MODERN SPECIES 2078 DSE (ENSLACG00000008481) #22 Actinopterygii ANCESTRAL SPECIES 27 ENSGT00940000164855 ENSGT00940000159402 ENSGT00940000160000 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00950000183028.a.a.b ENSGT00390000002112 ENSGT00940000155095 ENSGT00390000016054.a ENSGT00940000160189 ENSGT00940000163438 ENSGT01100000263543.c ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D ENSGT01030000235133 ENSGT00620000088063 Reedfish MODERN SPECIES 11 mfsd4b (ENSECRG00000006286) REV3L (ENSECRG00000006193) ENSECRG00000006164 ENSECRG00000006110 fynb (ENSECRG00000006091) ccn6 (ENSECRG00000005939) tube1 (ENSECRG00000005898) LAMA4 (ENSECRG00000004788) marcksa (ENSECRG00000004573) HDAC2 (ENSECRG00000004542) HS3ST5 (ENSECRG00000004527) FRK (ENSECRG00000004132) ENSECRG00000004061 col10a1a (ENSECRG00000004051) nt5dc1 (ENSECRG00000003803) dse (ENSECRG00000003776) #22 NDUFAF4 (ENSECRG00000003771) GPR63 (ENSECRG00000003767) fhl5 (ENSECRG00000003760) ufl1 (ENSECRG00000003751) fut9a (ENSECRG00000003744) manea (ENSECRG00000003736) EPHA7 (ENSECRG00000003713) ENSECRG00000003696 ENSECRG00000003692 map3k7 (ENSECRG00000003677) BACH2 (ENSECRG00000003666) ankrd6b (ENSECRG00000003656) rragd (ENSECRG00000003644) ube2j1 (ENSECRG00000003639) gabrr2a (ENSECRG00000003631) Neopterygii ANCESTRAL SPECIES 5 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609 ENSGT00940000155462 ENSGT00940000164843.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00390000002112 ENSGT00940000155095 ENSGT00390000016054.a ENSGT00940000160189 ENSGT01100000263543.c ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D ENSGT01030000235133 ENSGT00620000088063 Spotted gar MODERN SPECIES 647 REV3L (ENSLOCG00000016989) ENSLOCG00000016988 ENSLOCG00000018016 fynb (ENSLOCG00000016987) ENSLOCG00000016985 ccn6 (ENSLOCG00000016984) tube1 (ENSLOCG00000016981) LAMA4 (ENSLOCG00000016979) marcksa (ENSLOCG00000016978) HDAC2 (ENSLOCG00000016977) HS3ST5 (ENSLOCG00000016976) FRK (ENSLOCG00000016973) ENSLOCG00000016972 col10a1a (ENSLOCG00000016970) nt5dc1 (ENSLOCG00000016969) dse (ENSLOCG00000016968) #22 ENSLOCG00000018015 ENSLOCG00000016967 GPR63 (ENSLOCG00000016966) ENSLOCG00000016965 fhl5 (ENSLOCG00000016962) ufl1 (ENSLOCG00000016960) FUT9 (ENSLOCG00000018014) manea (ENSLOCG00000016959) EPHA7 (ENSLOCG00000016956) ENSLOCG00000016955 map3k7 (ENSLOCG00000016953) BACH2 (ENSLOCG00000016952) gja10a (ENSLOCG00000016951) casp8ap2 (ENSLOCG00000016949) ENSLOCG00000016948 Osteoglossocephalai ANCESTRAL SPECIES 2 ENSGT00940000164609 ENSGT00940000155462.`b.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419.a ENSGT00990000210177 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.b ENSGT00940000155887.a ENSGT00950000183031.A.a.b ENSGT00940000156864.c ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT01030000235133 ENSGT00620000088063 Osteoglossiformes ANCESTRAL SPECIES 11 ENSGT00390000007279 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000155462.`b.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424 ENSGT00730000111419.a ENSGT00990000210177 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a.s ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000158591.f Asian bonytongue MODERN SPECIES slc16a10 (ENSSFOG00015020930) mfsd4b (ENSSFOG00015020952) REV3L (ENSSFOG00015020961) FYN (ENSSFOG00015021008) ENSSFOG00015024953 ccn6 (ENSSFOG00015021113) tube1 (ENSSFOG00015021118) lama4 (ENSSFOG00015021131) marcksa (ENSSFOG00015031065) ENSSFOG00015029402 HDAC2 (ENSSFOG00015021171) HS3ST5 (ENSSFOG00015031919) FRK (ENSSFOG00015027272) COL10A1 (ENSSFOG00015021292) nt5dc1 (ENSSFOG00015021275) dse (ENSSFOG00015021300) #22 NDUFAF4 (ENSSFOG00015021309) GPR63 (ENSSFOG00015021315) ufl1 (ENSSFOG00015021424) FUT9 (ENSSFOG00015021469) FUT9 (ENSSFOG00015021476) FUT9 (ENSSFOG00015021481) epha7 (ENSSFOG00015021490) map3k7 (ENSSFOG00015021548) BACH2 (ENSSFOG00015021616) GJA10 (ENSSFOG00015021622) casp8ap2 (ENSSFOG00015021637) lyrm2 (ENSSFOG00015028587) ankrd6b (ENSSFOG00015021780) ube2j1 (ENSSFOG00015021828) GABRR2 (ENSSFOG00015021839) P. kingsleyae MODERN SPECIES 97 slc16a10 (ENSPKIG00000019474) mfsd4b (ENSPKIG00000019462) REV3L (ENSPKIG00000019348) FYN (ENSPKIG00000019310) ENSPKIG00000019223 ccn6 (ENSPKIG00000019211) tube1 (ENSPKIG00000019145) lama4 (ENSPKIG00000019078) marcksa (ENSPKIG00000019063) ENSPKIG00000019049 HDAC2 (ENSPKIG00000018988) HS3ST5 (ENSPKIG00000018953) FRK (ENSPKIG00000018922) COL10A1 (ENSPKIG00000018910) nt5dc1 (ENSPKIG00000018862) dse (ENSPKIG00000018831) #22 ENSPKIG00000018817 NDUFAF4 (ENSPKIG00000018806) GPR63 (ENSPKIG00000018795) ufl1 (ENSPKIG00000018737) FUT9 (ENSPKIG00000018708) epha7 (ENSPKIG00000018679) map3k7 (ENSPKIG00000018594) BACH2 (ENSPKIG00000018543) GJA10 (ENSPKIG00000018518) casp8ap2 (ENSPKIG00000018485) MDN1 (ENSPKIG00000018352) LYRM2 (ENSPKIG00000018291) ankrd6b (ENSPKIG00000018207) ube2j1 (ENSPKIG00000018161) gabrr2a (ENSPKIG00000018134) Clupeocephala ANCESTRAL SPECIES 1 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000159970 ENSGT00730000111419.a ENSGT00990000210177 ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d Otomorpha ANCESTRAL SPECIES 177 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT01030000235133.d.b ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000165360 ENSGT00940000155887.b ENSGT00940000156652 Clupeiformes ANCESTRAL SPECIES 206 ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT01030000235133.d.b ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d Atlantic herring MODERN SPECIES 6 rpf2 (ENSCHAG00000016229) slc16a10 (ENSCHAG00000016384) mfsd4b (ENSCHAG00000016397) REV3L (ENSCHAG00000016422) ENSCHAG00000016494 fynb (ENSCHAG00000016571) HDAC2 (ENSCHAG00000018215) marcksa (ENSCHAG00000018501) lama4 (ENSCHAG00000018566) tube1 (ENSCHAG00000020558) ccn6 (ENSCHAG00000020693) HS3ST5 (ENSCHAG00000020819) FRK (ENSCHAG00000020829) nt5dc1 (ENSCHAG00000020849) COL10A1 (ENSCHAG00000021020) dse (ENSCHAG00000021023) #22 NDUFAF4 (ENSCHAG00000021029) GPR63 (ENSCHAG00000021032) ufl1 (ENSCHAG00000021051) FUT9 (ENSCHAG00000021372) epha7 (ENSCHAG00000021393) map3k7 (ENSCHAG00000021765) BACH2 (ENSCHAG00000022221) GJA10 (ENSCHAG00000022263) casp8ap2 (ENSCHAG00000022278) MDN1 (ENSCHAG00000022353) LYRM2 (ENSCHAG00000023161) ankrd6b (ENSCHAG00000023194) GABRR2 (ENSCHAG00000023825) ube2j1 (ENSCHAG00000023846) kcnk13b (ENSCHAG00000023853) Denticle herring MODERN SPECIES 5 mfsd4b (ENSDCDG00000028307) REV3L (ENSDCDG00000028303) ENSDCDG00000028299 ENSDCDG00000028298 fynb (ENSDCDG00000023745) ccn6 (ENSDCDG00000023599) tube1 (ENSDCDG00000023526) lama4 (ENSDCDG00000021226) marcksa (ENSDCDG00000021180) HDAC2 (ENSDCDG00000021144) ENSDCDG00000021140 HS3ST5 (ENSDCDG00000021138) FRK (ENSDCDG00000021133) COL10A1 (ENSDCDG00000021132) nt5dc1 (ENSDCDG00000021105) dse (ENSDCDG00000021102) #22 ENSDCDG00000021096 ENSDCDG00000021089 ENSDCDG00000021087 ENSDCDG00000021085 NDUFAF4 (ENSDCDG00000021083) GPR63 (ENSDCDG00000021082) ufl1 (ENSDCDG00000021056) FUT9 (ENSDCDG00000021050) ENSDCDG00000021045 epha7 (ENSDCDG00000019788) map3k7 (ENSDCDG00000019660) BACH2 (ENSDCDG00000019646) GJA10 (ENSDCDG00000019642) ENSDCDG00000019640 casp8ap2 (ENSDCDG00000023769) Otophysi ANCESTRAL SPECIES 55 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j Characiphysae ANCESTRAL SPECIES 145 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j Characiphysae_b ANCESTRAL SPECIES 97 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j Characoidei ANCESTRAL SPECIES 89 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Red-bellied piranha MODERN SPECIES 1680 dse (ENSPNAG00000023021) #22 NDUFAF4 (ENSPNAG00000023040) GPR63 (ENSPNAG00000023053) ufl1 (ENSPNAG00000023127) Mexicana tetra MODERN SPECIES 18 fynb (ENSAMXG00000014156) si:dkey-119m7.4 (ENSAMXG00000033550) ccn6 (ENSAMXG00000042271) tube1 (ENSAMXG00000014226) ENSAMXG00000030992 lama4 (ENSAMXG00000014261) marcksa (ENSAMXG00000034538) ENSAMXG00000032323 HDAC2 (ENSAMXG00000014325) HS3ST5 (ENSAMXG00000014338) FRK (ENSAMXG00000041389) FRK (ENSAMXG00000034064) ENSAMXG00000032943 ENSAMXG00000035187 nt5dc1 (ENSAMXG00000003910) dse (ENSAMXG00000003932) #22 ENSAMXG00000044045 GPR63 (ENSAMXG00000025575) ufl1 (ENSAMXG00000031423) ercc6l (ENSAMXG00000004780) ENSAMXG00000004781 rnf128a (ENSAMXG00000004783) tbc1d8b (ENSAMXG00000004784) gja2 (ENSAMXG00000004785) gjb1a (ENSAMXG00000033103) mtmr2 (ENSAMXG00000004788) fam76b (ENSAMXG00000038899) cwc15 (ENSAMXG00000007538) acsl4b (ENSAMXG00000007542) stag2a (ENSAMXG00000007550) ENSAMXG00000041092 Electric eel MODERN SPECIES 857 marcksa (ENSEEEG00000006927) HDAC2 (ENSEEEG00000005962) HS3ST5 (ENSEEEG00000005891) FRK (ENSEEEG00000005550) ENSEEEG00000005503 nt5dc1 (ENSEEEG00000005502) dse (ENSEEEG00000005499) #22 NDUFAF4 (ENSEEEG00000005498) GPR63 (ENSEEEG00000005497) ufl1 (ENSEEEG00000005485) FUT9 (ENSEEEG00000005478) Channel catfish MODERN SPECIES 11 ENSIPUG00000016406 ENSIPUG00000016425 traf3ip2 (ENSIPUG00000016433) fynb (ENSIPUG00000016461) ENSIPUG00000016540 fez2b (ENSIPUG00000016554) ENSIPUG00000001502 wdr26b (ENSIPUG00000001516) ENSIPUG00000001565 marcks (ENSIPUG00000001623) HDAC2 (ENSIPUG00000001578) HS3ST5 (ENSIPUG00000001627) FRK (ENSIPUG00000001638) nt5dc1 (ENSIPUG00000001644) COL10A1 (ENSIPUG00000001660) dse (ENSIPUG00000001662) #22 ndufaf4 (ENSIPUG00000001666) gpr63 (ENSIPUG00000001674) ENSIPUG00000001678 ufl1 (ENSIPUG00000001690) ENSIPUG00000001707 ENSIPUG00000001717 ENSIPUG00000001739 ENSIPUG00000001744 ENSIPUG00000001750 ENSIPUG00000001755 ENSIPUG00000001759 ENSIPUG00000001762 ENSIPUG00000001773 Cyprinoidei ANCESTRAL SPECIES 202 ENSGT00730000111419.a ENSGT00940000165424.a.a ENSGT00940000155723 ENSGT00940000160119 ENSGT00940000155462.`b.b ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 924 ENSGT00940000166832.a ENSGT00940000164115.C.a.a.a ENSGT00940000156987.d ENSGT00940000155676.h ENSGT00940000154317.a.b.b.a ENSGT00390000006522.b.i #22 Goldfish MODERN SPECIES 39 CDK19 (ENSCARG00000056233) ENSCARG00000056325 amd1 (ENSCARG00000056360) ppil4 (ENSCARG00000056648) map3k5 (ENSCARG00000057161) ENSCARG00000057574 nrl (ENSCARG00000057581) ENSCARG00000057593 ENSCARG00000057602 smyd2b (ENSCARG00000057617) ENSCARG00000057741 FRK (ENSCARG00000057792) nt5dc1 (ENSCARG00000057982) COL10A1 (ENSCARG00000058052) ENSCARG00000058062 dse (ENSCARG00000058071) #22 GPR63 (ENSCARG00000058082) ENSCARG00000058089 fynb (ENSCARG00000058158) marcksa (ENSCARG00000058272) Cyprininae_a ANCESTRAL SPECIES 408 ENSGT00940000156560.h.b ENSGT00940000166832.a ENSGT00940000164115.C.a.a.a ENSGT00940000156987.d ENSGT00940000154317.a.b.b.a ENSGT00390000006522.b.i #22 ENSGT00390000002112.b ENSGT00950000183001.a.b.a.b ENSGT00390000001627.p ENSGT00940000155462.`b.b.b ENSGT00940000164843.b.g.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a.a.a ENSGT00730000111419.a.c ENSGT00390000006395 ENSGT00390000001588 ENSGT00940000155656.w ENSGT00940000164935.b.k.a ENSGT00940000157058.k.b ENSGT00940000158752.h.f.b Common carp reference MODERN SPECIES 28 rngtt (ENSCCRG00000034785) cnr1 (ENSCCRG00000064308) snx14 (ENSCCRG00000018146) nt5e (ENSCCRG00000008343) mei4 (ENSCCRG00000005422) ENSCCRG00000022435 myo6a (ENSCCRG00000016059) SENP6 (ENSCCRG00000041251) nrl (ENSCCRG00000049561) ENSCCRG00000027304 smyd2b (ENSCCRG00000023358) ENSCCRG00000067843 FRK (ENSCCRG00000045923) nt5dc1 (ENSCCRG00000069029) COL10A1 (ENSCCRG00000076105) dse (ENSCCRG00000049243) #22 ufl1 (ENSCCRG00000024687) ENSCCRG00000004150 ENSCCRG00000056471 fynb (ENSCCRG00000056134) ENSCCRG00000004191 ENSCCRG00000009697 ENSCCRG00000064624 rps6kc1 (ENSCCRG00000011581) ENSCCRG00000029990 ENSCCRG00000012339 ENSCCRG00000012354 ENSCCRG00000022269 ENSCCRG00000036293 ENSCCRG00000055263 ENSCCRG00000064504 Golden-line barbel MODERN SPECIES 344 ENSSGRG00000052841 zgc:154046 (ENSSGRG00000052843) timm17b (ENSSGRG00000052844) ENSSGRG00000052851 ENSSGRG00000052852 AEBP1 (ENSSGRG00000052853) ELMOD3 (ENSSGRG00000052868) star (ENSSGRG00000052877) ENSSGRG00000052899 lsm1 (ENSSGRG00000052989) rsph14 (ENSSGRG00000052992) HS3ST5 (ENSSGRG00000052997) FRK (ENSSGRG00000052998) nt5dc1 (ENSSGRG00000052999) COL10A1 (ENSSGRG00000053004) dse (ENSSGRG00000053005) #22 ufl1 (ENSSGRG00000053006) GPR63 (ENSSGRG00000053008) NDUFAF4 (ENSSGRG00000053009) fynb (ENSSGRG00000053010) ENSSGRG00000053014 ENSSGRG00000053015 ccn6 (ENSSGRG00000053016) TUBE1 (ENSSGRG00000053017) Cyprininae ANCESTRAL SPECIES 259 ENSGT01060000248564.a.a.a.a.h.a.a ENSGT00950000182856.a.b.b.c ENSGT00530000063775.a.a.d ENSGT00390000013856 ENSGT00530000063503.a.b.g.a.b ENSGT00940000156078.d.b ENSGT00940000155724.r.c ENSGT00940000166379.d ENSGT00940000165510 ENSGT00940000156560.h ENSGT00940000154790.a.a.b.g.a ENSGT00940000158991 ENSGT00940000156987.c ENSGT00940000155676.g ENSGT00940000154317.a.b.b.b ENSGT00390000006522.b.j #22 ENSGT00390000002112.a ENSGT00950000183001.a.b.a.a ENSGT00390000001627 ENSGT00940000155462.`b.b.a ENSGT00940000164843.b.g.b ENSGT00940000155462.`b.b.b ENSGT00940000164843.b.g.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.a.a.a.a ENSGT00730000111419.a.c ENSGT00390000006395 ENSGT00390000001588 ENSGT00940000155656.w ENSGT00940000164935.b.k.a Cyprininae_a ANCESTRAL SPECIES 345 ENSGT00950000182856.a.b.b.c ENSGT00530000063775.a.a.d ENSGT00390000013856 ENSGT00530000063503.a.b.g.a.b ENSGT00940000156078.d.b ENSGT00940000155724.r.c ENSGT00940000166379.d ENSGT00940000165510 ENSGT00940000156560.h.a ENSGT00940000154790.a.a.b.g.a ENSGT00940000158991 ENSGT00940000156987.c ENSGT00940000155676.g ENSGT00940000154317.a.b.b.b ENSGT00940000155676.h ENSGT00390000006522.b.j #22 ENSGT00390000002112.a ENSGT00950000183001.a.b.a.a ENSGT00390000001627.o ENSGT00940000155462.`b.b.a ENSGT00940000164843.b.g.b Common carp reference MODERN SPECIES 34 nt5e (ENSCCRG00000022848) ENSCCRG00000033059 myo6a (ENSCCRG00000022500) SENP6 (ENSCCRG00000065270) nrl (ENSCCRG00000002835) ENSCCRG00000054712 kcnk2b (ENSCCRG00000057872) ENSCCRG00000053911 ENSCCRG00000080108 ENSCCRG00000056967 ENSCCRG00000059646 ENSCCRG00000070369 ENSCCRG00000040581 COL10A1 (ENSCCRG00000074688) ENSCCRG00000073500 ENSCCRG00000027697 #22 ufl1 (ENSCCRG00000079835) GPR63 (ENSCCRG00000015550) NDUFAF4 (ENSCCRG00000015546) fynb (ENSCCRG00000015327) ENSCCRG00000015289 ccn6 (ENSCCRG00000003023) tube1 (ENSCCRG00000037750) lama4 (ENSCCRG00000033581) marcksa (ENSCCRG00000035694) cebpz (ENSCCRG00000050486) ndufaf7 (ENSCCRG00000050493) rps6kc1 (ENSCCRG00000016042) spint1b (ENSCCRG00000071651) ENSCCRG00000037534 ENSCCRG00000068016 Golden-line barbel MODERN SPECIES 1000 FRK (ENSSGRG00000037796) nt5dc1 (ENSSGRG00000037817) COL10A1 (ENSSGRG00000037819) dse (ENSSGRG00000037820) #22 ufl1 (ENSSGRG00000037836) GPR63 (ENSSGRG00000038123) NDUFAF4 (ENSSGRG00000038124) fynb (ENSSGRG00000038130) ENSSGRG00000038282 ccn6 (ENSSGRG00000038283) TUBE1 (ENSSGRG00000038284) TUBE1 (ENSSGRG00000038286) lama4 (ENSSGRG00000038290) ENSSGRG00000038309 marcksa (ENSSGRG00000038311) cebpz (ENSSGRG00000038318) ndufaf7 (ENSSGRG00000038325) rps6kc1 (ENSSGRG00000038337) spint1b (ENSSGRG00000038386) Goldfish MODERN SPECIES 12 ENSCARG00000003998 rngtt (ENSCARG00000003928) cnr1 (ENSCARG00000003897) snx14 (ENSCARG00000003771) nt5e (ENSCARG00000003735) ENSCARG00000003728 myo6a (ENSCARG00000003683) SENP6 (ENSCARG00000040225) nrl (ENSCARG00000040209) kcnk2b (ENSCARG00000040189) ENSCARG00000040180 HS3ST5 (ENSCARG00000040172) FRK (ENSCARG00000040135) COL10A1 (ENSCARG00000040127) nt5dc1 (ENSCARG00000039529) dse (ENSCARG00000039511) #22 ufl1 (ENSCARG00000037382) GPR63 (ENSCARG00000037322) NDUFAF4 (ENSCARG00000037313) fynb (ENSCARG00000036984) si:dkey-119m7.4 (ENSCARG00000036956) ccn6 (ENSCARG00000036922) tube1 (ENSCARG00000036807) lama4 (ENSCARG00000027968) marcksa (ENSCARG00000027739) cebpz (ENSCARG00000027674) ndufaf7 (ENSCARG00000027565) rps6kc1 (ENSCARG00000027518) spint1b (ENSCARG00000027492) ENSCARG00000027457 ENSCARG00000027378 Zebrafish MODERN SPECIES 12 znf292b (ENSDARG00000043973) lama4 (ENSDARG00000020785) TUBE1 (ENSDARG00000043982) tube1 (ENSDARG00000096620) ccn6 (ENSDARG00000071048) si:dkey-119m7.4 (ENSDARG00000071049) ENSDARG00000096654 fynb (ENSDARG00000025319) NDUFAF4 (ENSDARG00000077859) GPR63 (ENSDARG00000074540) ufl1 (ENSDARG00000007496) FRK (ENSDARG00000027807) nt5dc1 (ENSDARG00000006797) COL10A1 (ENSDARG00000101535) ENSDARG00000111552 dse (ENSDARG00000017988) #22 ENSDARG00000069661 smyd2b (ENSDARG00000005629) kcnk2b (ENSDARG00000007151) ENSDARG00000014232 nrl (ENSDARG00000100466) ENSDARG00000102923 myo6a (ENSDARG00000044016) ENSDARG00000077187 mei4 (ENSDARG00000043912) nt5e (ENSDARG00000071017) snx14 (ENSDARG00000006332) cnr1 (ENSDARG00000009020) rngtt (ENSDARG00000032261) ENSDARG00000100202 pnrc1 (ENSDARG00000043904) Euteleosteomorpha ANCESTRAL SPECIES 8 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d Protacanthopterygii ANCESTRAL SPECIES 33 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000170563 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987.i ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000155095.j ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000158591.g.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 177 ENSGT00940000164609.a ENSGT00940000155462.`b.b.c.b ENSGT00940000164843.b.e.b ENSGT00940000160119.n ENSGT00940000155723.o ENSGT00940000165424.b.a ENSGT00940000159970 ENSGT00730000111419.a.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000163852.c.a.b.b.a.b ENSGT00940000158991.a ENSGT00940000156987.i.a ENSGT00940000155676.b ENSGT00940000154317.a.b.b.f ENSGT00390000006522.b.k #22 ENSGT00390000001627.k ENSGT00950000183001.a.b.a.c ENSGT00390000002112.e ENSGT00940000155095.j ENSGT00940000167164.g ENSGT00940000157785.f.a ENSGT00940000158228.a.q ENSGT01090000260070.D.a.c ENSGT00620000088063.i.a ENSGT00390000002957 ENSGT00940000155887.b.c ENSGT00940000156652.p ENSGT00940000156864.d.a ENSGT00940000158591.g.a.d ENSGT00390000003365.a Huchen MODERN SPECIES 5 REV3L (ENSHHUG00000026525) ENSHHUG00000026535 fynb (ENSHHUG00000026547) ENSHHUG00000028022 ccn6 (ENSHHUG00000028046) tube1 (ENSHHUG00000028059) LAMA4 (ENSHHUG00000028112) ENSHHUG00000028148 marcksa (ENSHHUG00000028185) ENSHHUG00000028196 ENSHHUG00000028874 HS3ST5 (ENSHHUG00000028890) FRK (ENSHHUG00000028896) nt5dc1 (ENSHHUG00000028909) COL10A1 (ENSHHUG00000028914) dse (ENSHHUG00000028917) #22 NDUFAF4 (ENSHHUG00000028921) GPR63 (ENSHHUG00000028925) ufl1 (ENSHHUG00000028927) FUT9 (ENSHHUG00000028934) epha7 (ENSHHUG00000028944) map3k7 (ENSHHUG00000029318) BACH2 (ENSHHUG00000029484) GJA10 (ENSHHUG00000029497) casp8ap2 (ENSHHUG00000029503) LYRM2 (ENSHHUG00000029570) ankrd6b (ENSHHUG00000029573) ube2j1 (ENSHHUG00000029582) GABRR2 (ENSHHUG00000029591) gabrr1 (ENSHHUG00000029663) PM20D2 (ENSHHUG00000029695) Salmoninae_a ANCESTRAL SPECIES 23 ENSGT00940000156226.r.a ENSGT00940000164609.a ENSGT00940000155462.`b.b.c.b ENSGT00940000164843.b.e.b ENSGT00940000160119.n ENSGT00940000155723.o ENSGT00940000165424.b.a ENSGT00730000111419.a.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000163852.c.a.b.b.a.b ENSGT00940000158991.a ENSGT00940000156987.i.a ENSGT00940000154317.a.b.b.f ENSGT00940000155676.b ENSGT00390000006522.b.k #22 ENSGT00390000001627.k ENSGT00950000183001.a.b.a.c ENSGT00390000002112.e ENSGT00940000155095.j ENSGT00940000167164.g ENSGT00940000157785.f.a ENSGT00940000158228.a.q ENSGT01090000260070.D.a.c ENSGT00620000088063.i.a ENSGT00550000074802.p ENSGT00390000002957 ENSGT00940000155887.b.c ENSGT00940000156652.p ENSGT00940000156864.d.a ENSGT00940000158591.g.a.d Salmo ANCESTRAL SPECIES 12 ENSGT00940000156226.r.a ENSGT00940000164609.a ENSGT00940000155462.`b.b.c.b ENSGT00940000164843.b.e.b ENSGT00940000160119.n ENSGT00940000155723.o ENSGT00940000165424.b.a ENSGT00730000111419.a.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000163852.c.a.b.b.a.b ENSGT00940000158991.a ENSGT00940000156987.i.a ENSGT00940000154317.a.b.b.f ENSGT00940000155676.b ENSGT00390000006522.b.k #22 ENSGT00390000001627.k ENSGT00950000183001.a.b.a.c ENSGT00390000002112.e ENSGT00940000155095.j ENSGT00940000167164.g ENSGT00940000157785.f.a ENSGT00940000158228.a.q ENSGT01090000260070.D.a.c ENSGT00620000088063.i.a ENSGT00550000074802.p ENSGT00390000002957 ENSGT00940000155887.b.c ENSGT00940000156652.p ENSGT00940000156864.d.a ENSGT00940000158591.g.a.d Atlantic salmon MODERN SPECIES 25 ENSSSAG00000116387 fynb (ENSSSAG00000064455) ENSSSAG00000097403 ENSSSAG00000064350 wisp3 (ENSSSAG00000064347) tube1 (ENSSSAG00000064333) ENSSSAG00000055127 ENSSSAG00000095441 MARCS (ENSSSAG00000054925) hdac2 (ENSSSAG00000054858) ENSSSAG00000054837 HS3ST5 (ENSSSAG00000098424) FRK (ENSSSAG00000054820) COL10A1 (ENSSSAG00000067854) NT5DC1 (ENSSSAG00000054551) ENSSSAG00000054520 #22 NDUFAF4 (ENSSSAG00000105786) GPR63 (ENSSSAG00000054512) ufl1 (ENSSSAG00000054425) FUT9 (ENSSSAG00000104394) epha7 (ENSSSAG00000053507) ENSSSAG00000118879 map3k7 (ENSSSAG00000042466) BACH2 (ENSSSAG00000042426) GJA10 (ENSSSAG00000042422) ENSSSAG00000101584 MDN1 (ENSSSAG00000040753) ANKRD6 (ENSSSAG00000039729) ube2j1 (ENSSSAG00000039558) gabrr2 (ENSSSAG00000039249) gabrr1 (ENSSSAG00000009452) River trout MODERN SPECIES REV3L (ENSSTUG00000036803) ENSSTUG00000037565 fynb (ENSSTUG00000037621) ENSSTUG00000038930 ccn6 (ENSSTUG00000038945) TUBE1 (ENSSTUG00000038960) ENSSTUG00000039011 marcksa (ENSSTUG00000039897) ENSSTUG00000039905 HDAC2 (ENSSTUG00000039924) ENSSTUG00000040319 HS3ST5 (ENSSTUG00000040332) FRK (ENSSTUG00000040342) nt5dc1 (ENSSTUG00000040413) COL10A1 (ENSSTUG00000040594) dse (ENSSTUG00000040602) #22 ENSSTUG00000040628 ENSSTUG00000040642 GPR63 (ENSSTUG00000040654) ufl1 (ENSSTUG00000040704) FUT9 (ENSSTUG00000041026) epha7 (ENSSTUG00000041233) ENSSTUG00000044968 map3k7 (ENSSTUG00000044998) BACH2 (ENSSTUG00000045344) GJA10 (ENSSTUG00000045352) casp8ap2 (ENSSTUG00000045362) MDN1 (ENSSTUG00000045374) LYRM2 (ENSSTUG00000045454) ankrd6b (ENSSTUG00000045473) ube2j1 (ENSSTUG00000045590) Oncorhynchus ANCESTRAL SPECIES 25 ENSGT00940000156226.r.a ENSGT00940000164609.a ENSGT00940000155462.`b.b.c.b ENSGT00940000164843.b.e.b ENSGT00940000160119.n ENSGT00940000155723.o ENSGT00940000165424.b.a ENSGT00730000111419.a.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000163852.c.a.b.b.a.b ENSGT00940000158991.a ENSGT00940000156987.i.a ENSGT00940000154317.a.b.b.f ENSGT00940000155676.b ENSGT00390000006522.b.k #22 ENSGT00390000001627.k ENSGT00950000183001.a.b.a.c ENSGT00390000002112.e ENSGT00940000155095.j ENSGT00940000167164.g ENSGT00940000157785.f.a ENSGT00940000158228.a.q ENSGT01090000260070.D.a.c ENSGT00620000088063.i.a ENSGT00390000002957 ENSGT00940000155887.b.c ENSGT00940000156652.p ENSGT00940000156864.d.a ENSGT00940000158591.g.a.d ENSGT00390000003365.a Oncorhynchus_a ANCESTRAL SPECIES 17 ENSGT00940000156226.r.a ENSGT00940000164609.a ENSGT00940000155462.`b.b.c.b ENSGT00940000164843.b.e.b ENSGT00940000160119.n ENSGT00940000155723.o ENSGT00940000165424.b.a ENSGT00730000111419.a.a ENSGT00990000210177.a ENSGT00940000155725 ENSGT00940000163852.c.a.b.b.a.b ENSGT00940000158991.a ENSGT00940000156987.i.a ENSGT00940000154317.a.b.b.f ENSGT00940000155676.b ENSGT00390000006522.b.k #22 ENSGT00390000001627.k ENSGT00950000183001.a.b.a.c ENSGT00390000002112.e ENSGT00940000155095.j ENSGT00940000167164.g ENSGT00940000157785.f.a ENSGT00940000158228.a.q ENSGT01090000260070.D.a.c ENSGT00620000088063.i.a ENSGT00390000002957 ENSGT00940000155887.b.c ENSGT00940000156652.p ENSGT00940000156864.d.a ENSGT00940000158591.g.a.d ENSGT00390000003365.a Chinook salmon MODERN SPECIES 9 REV3L (ENSOTSG00005016492) ENSOTSG00005016476 fynb (ENSOTSG00005016411) ENSOTSG00005016408 ccn6 (ENSOTSG00005016407) TUBE1 (ENSOTSG00005016405) ENSOTSG00005014712 marcksa (ENSOTSG00005031499) ENSOTSG00005031498 HDAC2 (ENSOTSG00005031434) ENSOTSG00005031430 HS3ST5 (ENSOTSG00005031429) FRK (ENSOTSG00005031428) COL10A1 (ENSOTSG00005031427) nt5dc1 (ENSOTSG00005031425) dse (ENSOTSG00005031424) #22 NDUFAF4 (ENSOTSG00005031423) GPR63 (ENSOTSG00005031422) ufl1 (ENSOTSG00005031418) FUT9 (ENSOTSG00005031416) epha7 (ENSOTSG00005026547) MAP3K7 (ENSOTSG00005022541) BACH2 (ENSOTSG00005022536) GJA10 (ENSOTSG00005022534) ENSOTSG00005022532 LYRM2 (ENSOTSG00005022523) ankrd6b (ENSOTSG00005022484) ube2j1 (ENSOTSG00005022481) gabrr1 (ENSOTSG00005022024) PM20D2 (ENSOTSG00005022023) pnrc1 (ENSOTSG00005022022) Coho salmon MODERN SPECIES 13 mfsd4b (ENSOKIG00005018318) REV3L (ENSOKIG00005017495) ENSOKIG00005017425 fynb (ENSOKIG00005016693) ENSOKIG00005016645 ccn6 (ENSOKIG00005016640) TUBE1 (ENSOKIG00005016622) ENSOKIG00005013012 MARCKS (ENSOKIG00005012852) HDAC2 (ENSOKIG00005012676) ENSOKIG00005012611 HS3ST5 (ENSOKIG00005012601) FRK (ENSOKIG00005012555) COL10A1 (ENSOKIG00005012546) NT5DC1 (ENSOKIG00005012518) dse (ENSOKIG00005012509) #22 NDUFAF4 (ENSOKIG00005012503) GPR63 (ENSOKIG00005012498) ufl1 (ENSOKIG00005012399) FUT9 (ENSOKIG00005012375) epha7 (ENSOKIG00005009967) ENSOKIG00005009845 MAP3K7 (ENSOKIG00005009130) BACH2 (ENSOKIG00005009082) GJA10 (ENSOKIG00005009073) casp8ap2 (ENSOKIG00005009010) LYRM2 (ENSOKIG00005007594) ankrd6b (ENSOKIG00005006622) ube2j1 (ENSOKIG00005006553) GABRR2 (ENSOKIG00005006453) PM20D2 (ENSOKIG00005006423) Rainbow trout MODERN SPECIES 25 ENSOMYG00000039518 ENSOMYG00000008914 ccn6 (ENSOMYG00000008875) tube1 (ENSOMYG00000008799) ENSOMYG00000008552 MARCKS (ENSOMYG00000008352) HDAC2 (ENSOMYG00000008291) ENSOMYG00000002830 ENSOMYG00000049534 ENSOMYG00000057248 ENSOMYG00000008155 HS3ST5 (ENSOMYG00000074544) FRK (ENSOMYG00000007944) COL10A1 (ENSOMYG00000007882) NT5DC1 (ENSOMYG00000067754) ENSOMYG00000007741 #22 NDUFAF4 (ENSOMYG00000007528) GPR63 (ENSOMYG00000007470) ufl1 (ENSOMYG00000007400) FUT9 (ENSOMYG00000007255) epha7 (ENSOMYG00000005599) map3k7 (ENSOMYG00000002862) BACH2 (ENSOMYG00000002076) GJA10 (ENSOMYG00000002054) casp8ap2 (ENSOMYG00000002031) lyrm2 (ENSOMYG00000001558) ANKRD6 (ENSOMYG00000001538) ube2j1 (ENSOMYG00000001413) GABRR2 (ENSOMYG00000001359) gabrr1 (ENSOMYG00000001339) PM20D2 (ENSOMYG00000001257) Salmoninae ANCESTRAL SPECIES 123 ENSGT00530000063320.B.h ENSGT00940000156226.r.b ENSGT00940000155462.`b.b.c.a ENSGT00940000166133 ENSGT00940000155462.`b.b.d ENSGT00940000164843.a ENSGT00940000164843.b.e.a ENSGT00940000160119.m ENSGT00940000155723.p ENSGT00940000165424.b.b ENSGT00730000111419.a.b ENSGT00940000158991.b ENSGT00940000156987.i.b ENSGT00940000155676.a ENSGT00940000154317.a.b.b.e ENSGT00390000006522.b.l #22 ENSGT00390000001627.l ENSGT00950000183001.a.b.a.d ENSGT00390000002112.f ENSGT00940000167164.h ENSGT00940000157785.f.b ENSGT00940000158228.a.r ENSGT01090000260070.D.a.d ENSGT00620000088063.i.b ENSGT00550000074802 ENSGT00970000193844 ENSGT00940000155887.b.d ENSGT00940000156652.o ENSGT00940000156864.d.b ENSGT00940000158591.g.a.c ENSGT00530000063881.a.a.a Salmoninae_a ANCESTRAL SPECIES 42 ENSGT00390000007279.cb ENSGT00940000157966.q ENSGT00530000063320.B.h ENSGT00940000156226.r.b ENSGT01030000237090 ENSGT00940000155462.`b.b.c.a ENSGT00940000164843.b.e.a ENSGT00940000160119.m ENSGT00940000155723.p ENSGT00940000165424.b.b ENSGT00730000111419.a.b ENSGT00940000158991.b ENSGT00940000156987.i.b ENSGT00940000154317.a.b.b.e ENSGT00940000155676.a ENSGT00390000006522.b.l #22 ENSGT00390000001627.l ENSGT00950000183001.a.b.a.d ENSGT00390000002112.f ENSGT00940000167164.h ENSGT00940000157785.f.b ENSGT00940000158228.a.r ENSGT01090000260070.D.a.d ENSGT00620000088063.i.b ENSGT00550000074802.o ENSGT00970000193844 ENSGT00940000155887.b.d ENSGT00940000156652.o ENSGT00940000156864.d.b ENSGT00940000158591.g.a.c ENSGT00530000063881.a.a.a Salmo ANCESTRAL SPECIES 26 ENSGT00530000063320.B.h ENSGT00940000156226.r.b ENSGT01030000237090 ENSGT00940000155462.`b.b.c.a ENSGT00940000164843.b.e.a ENSGT00940000160119.m ENSGT00940000155723.p ENSGT01100000266740 ENSGT00940000165424.b.b ENSGT00730000111419.a.b ENSGT00990000210177.b ENSGT00940000158991.b ENSGT00940000156987.i.b ENSGT00940000154317.a.b.b.e ENSGT00940000155676.a ENSGT00390000006522.b.l #22 ENSGT00390000001627.l ENSGT00950000183001.a.b.a.d ENSGT00390000002112.f ENSGT00940000167164.h ENSGT00940000157785.f.b ENSGT00940000158228.a.r ENSGT01090000260070.D.a.d ENSGT00620000088063.i.b ENSGT00550000074802.o ENSGT00970000193844 ENSGT00940000155887.b.d ENSGT00940000156652.o ENSGT00940000156864.d.b ENSGT00940000158591.g.a.c ENSGT00530000063881.a.a.a Atlantic salmon MODERN SPECIES 6 REV3L (ENSSSAG00000073992) ENSSSAG00000073969 fynb (ENSSSAG00000070839) ENSSSAG00000070744 ccn6 (ENSSSAG00000070737) TUBE1 (ENSSSAG00000070718) ENSSSAG00000070715 ENSSSAG00000068006 MARCKS (ENSSSAG00000067871) ENSSSAG00000067868 ENSSSAG00000086095 HS3ST5 (ENSSSAG00000092480) FRK (ENSSSAG00000067861) COL10A1 (ENSSSAG00000114656) NT5DC1 (ENSSSAG00000067837) ENSSSAG00000067829 #22 NDUFAF4 (ENSSSAG00000067828) GPR63 (ENSSSAG00000067826) ufl1 (ENSSSAG00000066588) epha7 (ENSSSAG00000042905) ENSSSAG00000119505 ENSSSAG00000089696 map3k7 (ENSSSAG00000045157) BACH2 (ENSSSAG00000097286) GJA10 (ENSSSAG00000045004) casp8ap2 (ENSSSAG00000045001) MDN1 (ENSSSAG00000041975) ENSSSAG00000041852 ANKRD6 (ENSSSAG00000041215) ube2j1 (ENSSSAG00000041153) GABRR2 (ENSSSAG00000040921) River trout MODERN SPECIES 28 rpf2 (ENSSTUG00000034174) slc16a10 (ENSSTUG00000034237) mfsd4b (ENSSTUG00000034247) REV3L (ENSSTUG00000034284) ENSSTUG00000034487 ccn6 (ENSSTUG00000034502) TUBE1 (ENSSTUG00000034518) ENSSTUG00000034589 ENSSTUG00000034736 marcksa (ENSSTUG00000038416) ENSSTUG00000038419 HS3ST5 (ENSSTUG00000038432) FRK (ENSSTUG00000037450) nt5dc1 (ENSSTUG00000037461) COL10A1 (ENSSTUG00000037526) dse (ENSSTUG00000037532) #22 NDUFAF4 (ENSSTUG00000037545) GPR63 (ENSSTUG00000037551) ufl1 (ENSSTUG00000037569) epha7 (ENSSTUG00000037936) map3k7 (ENSSTUG00000043384) BACH2 (ENSSTUG00000043728) GJA10 (ENSSTUG00000043739) casp8ap2 (ENSSTUG00000043744) MDN1 (ENSSTUG00000043811) ENSSTUG00000045463 ankrd6b (ENSSTUG00000045483) ube2j1 (ENSSTUG00000045591) GABRR2 (ENSSTUG00000045654) pnrc1 (ENSSTUG00000045669) rngtt (ENSSTUG00000045677) Oncorhynchus ANCESTRAL SPECIES 35 ENSGT00390000007279.cb ENSGT00940000157966.q ENSGT00530000063320.B.h ENSGT00940000156226.r.b ENSGT01030000237090 ENSGT00940000155462.`b.b.c.a ENSGT00940000164843.b.e.a ENSGT00940000160119.m ENSGT00940000155723.p ENSGT00940000165424.b.b ENSGT00730000111419.a.b ENSGT00940000158991.b ENSGT00940000156987.i.b ENSGT00940000154317.a.b.b.e ENSGT00940000155676.a ENSGT00390000006522.b.l #22 ENSGT00390000001627.l ENSGT00950000183001.a.b.a.d ENSGT00390000002112.f ENSGT00940000167164.h ENSGT00940000157785.f.b ENSGT00940000158228.a.r ENSGT01090000260070.D.a.d ENSGT00620000088063.i.b ENSGT00550000074802.o ENSGT00970000193844 ENSGT00940000155887.b.d ENSGT00940000156652.o ENSGT00940000156864.d.b ENSGT00940000158591.g.a.c ENSGT00530000063881.a.a.a Oncorhynchus_a ANCESTRAL SPECIES 53 ENSGT00390000007279.cb ENSGT00940000157966.q ENSGT00530000063320.B.h ENSGT00940000156226.r.b ENSGT01030000237090 ENSGT00940000155462.`b.b.c.a ENSGT00940000164843.b.e.a ENSGT00940000160119.m ENSGT00940000155723.p ENSGT00940000165424.b.b ENSGT00730000111419.a.b ENSGT00940000158991.b ENSGT00940000156987.i.b ENSGT00940000154317.a.b.b.e ENSGT00940000155676.a ENSGT00390000006522.b.l #22 ENSGT00390000001627.l ENSGT00950000183001.a.b.a.d ENSGT00390000002112.f ENSGT00940000167164.h ENSGT00940000157785.f.b ENSGT00940000158228.a.r ENSGT01090000260070.D.a.d ENSGT00620000088063.i.b ENSGT00550000074802.o ENSGT00970000193844 ENSGT00940000155887.b.d ENSGT00940000156652.o ENSGT00940000156864.d.b ENSGT00940000158591.g.a.c ENSGT00530000063881.a.a.a Coho salmon MODERN SPECIES 3 SLC16A10 (ENSOKIG00005009920) MFSD4B (ENSOKIG00005009908) REV3L (ENSOKIG00005009829) ENSOKIG00005009798 ENSOKIG00005009792 fynb (ENSOKIG00005008681) ENSOKIG00005008558 ccn6 (ENSOKIG00005008482) TUBE1 (ENSOKIG00005008432) ENSOKIG00005005839 marcksa (ENSOKIG00005005596) HS3ST5 (ENSOKIG00005005570) FRK (ENSOKIG00005005555) COL10A1 (ENSOKIG00005005531) nt5dc1 (ENSOKIG00005005480) DSE (ENSOKIG00005005467) #22 NDUFAF4 (ENSOKIG00005005461) GPR63 (ENSOKIG00005005457) ufl1 (ENSOKIG00005005369) epha7 (ENSOKIG00005003305) ENSOKIG00005003050 MAP3K7 (ENSOKIG00005002964) BACH2 (ENSOKIG00005002910) GJA10 (ENSOKIG00005002896) casp8ap2 (ENSOKIG00005002883) MDN1 (ENSOKIG00005002761) ANKRD6 (ENSOKIG00005002677) ENSOKIG00005002613 ube2j1 (ENSOKIG00005002580) GABRR1 (ENSOKIG00005002522) pnrc1 (ENSOKIG00005002495) Chinook salmon MODERN SPECIES 29 mycb (ENSOTSG00005018280) slc16a10 (ENSOTSG00005018279) mfsd4b (ENSOTSG00005018276) REV3L (ENSOTSG00005018260) ENSOTSG00005018251 fynb (ENSOTSG00005018238) ENSOTSG00005018236 ccn6 (ENSOTSG00005018221) TUBE1 (ENSOTSG00005018218) ENSOTSG00005017248 marcksa (ENSOTSG00005017242) HS3ST5 (ENSOTSG00005017239) FRK (ENSOTSG00005017238) COL10A1 (ENSOTSG00005017237) nt5dc1 (ENSOTSG00005016844) dse (ENSOTSG00005016842) #22 NDUFAF4 (ENSOTSG00005016841) ENSOTSG00005016840 GPR63 (ENSOTSG00005016839) ufl1 (ENSOTSG00005016789) epha7 (ENSOTSG00005013435) MAP3K7 (ENSOTSG00005009808) BACH2 (ENSOTSG00005009802) casp8ap2 (ENSOTSG00005009801) MDN1 (ENSOTSG00005009798) ENSOTSG00005009795 ankrd6b (ENSOTSG00005009794) ube2j1 (ENSOTSG00005009792) GABRR2 (ENSOTSG00005009786) pnrc1 (ENSOTSG00005009785) cnr1 (ENSOTSG00005009784) Rainbow trout MODERN SPECIES 29 SLC16A10 (ENSOMYG00000043735) MFSD4B (ENSOMYG00000043723) REV3L (ENSOMYG00000043668) ENSOMYG00000061277 FYN (ENSOMYG00000043614) ENSOMYG00000043586 ENSOMYG00000043576 ENSOMYG00000058404 ENSOMYG00000041714 MARCKS (ENSOMYG00000041542) HS3ST5 (ENSOMYG00000041534) FRK (ENSOMYG00000041527) COL10A1 (ENSOMYG00000041520) NT5DC1 (ENSOMYG00000041488) ENSOMYG00000056638 ENSOMYG00000041480 #22 NDUFAF4 (ENSOMYG00000041476) GPR63 (ENSOMYG00000041471) ufl1 (ENSOMYG00000041405) epha7 (ENSOMYG00000038386) map3k7 (ENSOMYG00000034262) BACH2 (ENSOMYG00000033945) GJA10 (ENSOMYG00000033942) casp8ap2 (ENSOMYG00000033939) ENSOMYG00000033931 ANKRD6 (ENSOMYG00000033879) ube2j1 (ENSOMYG00000033801) GABRR2 (ENSOMYG00000033767) gabrr1 (ENSOMYG00000033634) pnrc1 (ENSOMYG00000033629) ENSOMYG00000056689 Huchen MODERN SPECIES 68 slc16a10 (ENSHHUG00000026380) mfsd4b (ENSHHUG00000026392) REV3L (ENSHHUG00000026399) ENSHHUG00000026411 fynb (ENSHHUG00000026432) ENSHHUG00000028089 ENSHHUG00000028183 ccn6 (ENSHHUG00000028192) ENSHHUG00000028210 marcksa (ENSHHUG00000028383) ENSHHUG00000028390 HS3ST5 (ENSHHUG00000028393) FRK (ENSHHUG00000028396) nt5dc1 (ENSHHUG00000028398) COL10A1 (ENSHHUG00000028420) dse (ENSHHUG00000028425) #22 NDUFAF4 (ENSHHUG00000028435) GPR63 (ENSHHUG00000028437) ufl1 (ENSHHUG00000028438) Northern pike MODERN SPECIES 17 ENSELUG00000027505 REV3L (ENSELUG00000000782) ENSELUG00000018263 ENSELUG00000018244 fynb (ENSELUG00000018218) si:dkey-119m7.4 (ENSELUG00000000742) ccn6 (ENSELUG00000000755) tube1 (ENSELUG00000018051) ENSELUG00000018005 marcksa (ENSELUG00000031360) HDAC2 (ENSELUG00000017897) HS3ST5 (ENSELUG00000017858) FRK (ENSELUG00000017840) COL10A1 (ENSELUG00000031539) nt5dc1 (ENSELUG00000017780) dse (ENSELUG00000017742) #22 NDUFAF4 (ENSELUG00000033989) GPR63 (ENSELUG00000017719) ufl1 (ENSELUG00000017701) epha7 (ENSELUG00000017596) map3k7 (ENSELUG00000017538) BACH2 (ENSELUG00000017489) GJA10 (ENSELUG00000000676) casp8ap2 (ENSELUG00000017451) ENSELUG00000017413 MDN1 (ENSELUG00000027898) LYRM2 (ENSELUG00000025524) ankrd6b (ENSELUG00000017380) ube2j1 (ENSELUG00000017333) GABRR2 (ENSELUG00000017245) PM20D2 (ENSELUG00000017210) Acanthomorphata ANCESTRAL SPECIES 121 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT01030000235133 ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000158591.g.a Cod MODERN SPECIES 13 ENSGMOG00000024992 ENSGMOG00000032431 ENSGMOG00000030366 ENSGMOG00000023453 ENSGMOG00000033727 ENSGMOG00000001620 ENSGMOG00000024735 ENSGMOG00000022930 ENSGMOG00000001990 MARCKS (ENSGMOG00000036500) ENSGMOG00000027318 ENSGMOG00000028109 FRK (ENSGMOG00000018142) COL10A1 (ENSGMOG00000027500) NT5DC1 (ENSGMOG00000000025) ENSGMOG00000035507 #22 NDUFAF4 (ENSGMOG00000001994) GPR63 (ENSGMOG00000020145) ufl1 (ENSGMOG00000001434) ENSGMOG00000022388 ENSGMOG00000024912 MAP3K7 (ENSGMOG00000017415) ENSGMOG00000031505 MDN1 (ENSGMOG00000009684) LYRM2 (ENSGMOG00000032297) ANKRD6 (ENSGMOG00000002106) ube2j1 (ENSGMOG00000015107) GABRR2 (ENSGMOG00000000454) gabrr1 (ENSGMOG00000010603) ENSGMOG00000003573 ENSGMOG00000008550 Euacanthomorphacea ANCESTRAL SPECIES 75 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT01030000235133 ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000158591.g.a Pinecone sodierfish MODERN SPECIES 16 ENSMMDG00005018944 ENSMMDG00005018939 fynb (ENSMMDG00005018083) ENSMMDG00005018072 ccn6 (ENSMMDG00005018060) tube1 (ENSMMDG00005018056) ENSMMDG00005017426 ENSMMDG00005017408 ENSMMDG00005017407 ENSMMDG00005017405 HDAC2 (ENSMMDG00005016678) HS3ST5 (ENSMMDG00005016668) FRK (ENSMMDG00005016660) ENSMMDG00005016656 nt5dc1 (ENSMMDG00005016625) dse (ENSMMDG00005016619) #22 NDUFAF4 (ENSMMDG00005016616) GPR63 (ENSMMDG00005016613) ufl1 (ENSMMDG00005016601) epha7 (ENSMMDG00005016397) ENSMMDG00005016392 map3k7 (ENSMMDG00005015168) BACH2 (ENSMMDG00005015159) GJA10 (ENSMMDG00005015158) casp8ap2 (ENSMMDG00005015156) MDN1 (ENSMMDG00005015147) LYRM2 (ENSMMDG00005015140) ankrd6b (ENSMMDG00005015132) ube2j1 (ENSMMDG00005015124) GABRR2 (ENSMMDG00005015122) gabrr1 (ENSMMDG00005015118) Percomorphaceae ANCESTRAL SPECIES 70 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT01030000235133 ENSGT00620000088063 ENSGT00970000193844 ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000155887.b ENSGT00390000002957 ENSGT00550000074802 Tiger tail seahorse MODERN SPECIES 84 ENSHCOG00000020013 ENSHCOG00000019993 GJA10 (ENSHCOG00000019977) kcnk10a (ENSHCOG00000019968) BDKRB2 (ENSHCOG00000019954) ENSHCOG00000019936 FRK (ENSHCOG00000019705) nt5dc1 (ENSHCOG00000019685) dse (ENSHCOG00000019654) #22 ENSHCOG00000019644 GPR63 (ENSHCOG00000019635) epha7 (ENSHCOG00000019631) ENSHCOG00000019604 map3k7 (ENSHCOG00000019579) ENSHCOG00000018949 Percomorphaceae_B ANCESTRAL SPECIES 28 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Percomorphaceae_C ANCESTRAL SPECIES 24 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00940000178072 Carangaria ANCESTRAL SPECIES 18 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00950000182878.b.b Pleuronectoidei ANCESTRAL SPECIES 46 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00950000182878.b.b Tongue sole MODERN SPECIES 17 mfsd4b (ENSCSEG00000017328) REV3L (ENSCSEG00000017283) ENSCSEG00000017263 ENSCSEG00000017248 FYN (ENSCSEG00000017233) ENSCSEG00000017228 ENSCSEG00000017224 ccn6 (ENSCSEG00000017034) ENSCSEG00000016997 marcksa (ENSCSEG00000016991) HDAC2 (ENSCSEG00000016978) HS3ST5 (ENSCSEG00000016969) FRK (ENSCSEG00000016944) COL10A1 (ENSCSEG00000016899) nt5dc1 (ENSCSEG00000016880) dse (ENSCSEG00000016870) #22 ENSCSEG00000016864 GPR63 (ENSCSEG00000016860) ENSCSEG00000016856 epha7 (ENSCSEG00000016445) gopc (ENSCSEG00000016000) ENSCSEG00000015993 ddx51 (ENSCSEG00000015970) smim8 (ENSCSEG00000015963) ENSCSEG00000015949 ENSCSEG00000015948 olfcb1 (ENSCSEG00000015943) ENSCSEG00000015941 ENSCSEG00000015939 hsf2 (ENSCSEG00000015936) gja1b (ENSCSEG00000015924) Turbot MODERN SPECIES 12 ENSSMAG00000018194 ENSSMAG00000028716 ENSSMAG00000012000 ENSSMAG00000031464 ENSSMAG00000032217 ENSSMAG00000034985 ENSSMAG00000000999 MARCKS (ENSSMAG00000000975) ENSSMAG00000000957 ENSSMAG00000000937 HS3ST5 (ENSSMAG00000000917) ENSSMAG00000023460 FRK (ENSSMAG00000000878) nt5dc1 (ENSSMAG00000018322) COL10A1 (ENSSMAG00000018381) dse (ENSSMAG00000018215) #22 NDUFAF4 (ENSSMAG00000018226) GPR63 (ENSSMAG00000018232) ufl1 (ENSSMAG00000018238) epha7 (ENSSMAG00000018269) ENSSMAG00000037402 ENSSMAG00000032345 TAK1 (ENSSMAG00000002251) BACH2 (ENSSMAG00000002221) GJA10 (ENSSMAG00000002208) ENSSMAG00000002157 MDN1 (ENSSMAG00000001774) lyrm2 (ENSSMAG00000001747) ANKRD6 (ENSSMAG00000001618) ENSSMAG00000001568 ENSSMAG00000001540 Carangaria_A ANCESTRAL SPECIES 68 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000179536 ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00940000165360 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a Seriola ANCESTRAL SPECIES 4 ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000179536 ENSGT00970000193381.a.b.b.c.a.a ENSGT00940000163149.a.b.c.a.a.e ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00940000165360 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00390000000417.a.a.b.a.b ENSGT00940000157376 Greater amberjack MODERN SPECIES 10 fynb (ENSSDUG00000010216) ENSSDUG00000010206 ccn6 (ENSSDUG00000010183) tube1 (ENSSDUG00000010088) ENSSDUG00000009762 ENSSDUG00000009730 ENSSDUG00000009721 ENSSDUG00000009617 ENSSDUG00000009595 marcksa (ENSSDUG00000009591) HDAC2 (ENSSDUG00000009517) HS3ST5 (ENSSDUG00000009500) FRK (ENSSDUG00000009469) COL10A1 (ENSSDUG00000009465) nt5dc1 (ENSSDUG00000009437) dse (ENSSDUG00000009426) #22 NDUFAF4 (ENSSDUG00000009417) GPR63 (ENSSDUG00000009413) ufl1 (ENSSDUG00000009381) epha7 (ENSSDUG00000009344) ENSSDUG00000009336 FLOT2 (ENSSDUG00000009326) map3k7 (ENSSDUG00000009266) BACH2 (ENSSDUG00000009249) GJA10 (ENSSDUG00000009241) casp8ap2 (ENSSDUG00000009230) ENSSDUG00000009190 MDN1 (ENSSDUG00000009000) lyrm2 (ENSSDUG00000008974) ankrd6b (ENSSDUG00000008898) GABRR2 (ENSSDUG00000008861) Yellowtail amberjack MODERN SPECIES 3194 ENSSLDG00000013959 fynb (ENSSLDG00000013902) ENSSLDG00000013830 ccn6 (ENSSLDG00000013804) tube1 (ENSSLDG00000013782) ENSSLDG00000013724 ENSSLDG00000013702 ENSSLDG00000013677 ENSSLDG00000013452 marcksa (ENSSLDG00000013404) HDAC2 (ENSSLDG00000013387) HS3ST5 (ENSSLDG00000013370) FRK (ENSSLDG00000013349) COL10A1 (ENSSLDG00000013336) nt5dc1 (ENSSLDG00000013308) dse (ENSSLDG00000013289) #22 NDUFAF4 (ENSSLDG00000013282) GPR63 (ENSSLDG00000013274) Barramundi perch MODERN SPECIES 210 FRK (ENSLCAG00010012485) COL10A1 (ENSLCAG00010012480) nt5dc1 (ENSLCAG00010012469) dse (ENSLCAG00010012458) #22 NDUFAF4 (ENSLCAG00010012451) GPR63 (ENSLCAG00010012447) ufl1 (ENSLCAG00010012434) epha7 (ENSLCAG00010011456) MAP3K7 (ENSLCAG00010011225) ENSLCAG00010011210 GJA10 (ENSLCAG00010011206) ENSLCAG00010011201 ENSLCAG00010011100 ENSLCAG00010011096 Anabantaria ANCESTRAL SPECIES 20 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00940000165360 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 Anabantoidei ANCESTRAL SPECIES 15 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00970000193844 ENSGT00940000156652 ENSGT00550000074802 ENSGT00940000165360 ENSGT00940000155887.b Climbing perch MODERN SPECIES 15 REV3L (ENSATEG00000012750) ENSATEG00000012723 fynb (ENSATEG00000012659) ENSATEG00000012643 CCN6 (ENSATEG00000012634) tube1 (ENSATEG00000027346) ENSATEG00000012483 ENSATEG00000012450 ENSATEG00000012320 MARCKS (ENSATEG00000012285) HDAC2 (ENSATEG00000012237) HS3ST5 (ENSATEG00000012220) FRK (ENSATEG00000012166) COL10A1 (ENSATEG00000012158) NT5DC1 (ENSATEG00000012105) ENSATEG00000025202 #22 ENSATEG00000029123 ENSATEG00000012063 ENSATEG00000012029 ENSATEG00000011991 ENSATEG00000025345 ENSATEG00000029697 ENSATEG00000011945 ube2j1 (ENSATEG00000011911) ANKRD6 (ENSATEG00000011880) ENSATEG00000011893 MDN1 (ENSATEG00000011603) casp8ap2 (ENSATEG00000011491) GJA10 (ENSATEG00000011466) BACH2 (ENSATEG00000011447) map3k7 (ENSATEG00000029872) Siamese fighting fish MODERN SPECIES 13 ENSBSLG00000005016 ENSBSLG00000025098 ENSBSLG00000025097 ENSBSLG00000025095 ENSBSLG00000025093 ENSBSLG00000025085 ENSBSLG00000025084 ENSBSLG00000025083 ENSBSLG00000025082 ENSBSLG00000025080 ENSBSLG00000025078 ENSBSLG00000025076 ENSBSLG00000025074 ENSBSLG00000025072 ENSBSLG00000025065 dse (ENSBSLG00000025061) #22 NDUFAF4 (ENSBSLG00000025046) GPR63 (ENSBSLG00000025041) ufl1 (ENSBSLG00000024963) epha7 (ENSBSLG00000024738) ENSBSLG00000024709 COL10A1 (ENSBSLG00000024708) nt5dc1 (ENSBSLG00000024699) ENSBSLG00000024696 ENSBSLG00000024695 ENSBSLG00000024693 map3k7 (ENSBSLG00000024544) ENSBSLG00000024510 BACH2 (ENSBSLG00000024488) GJA10 (ENSBSLG00000024483) ENSBSLG00000024482 Zig-zag eel MODERN SPECIES 16 ENSMAMG00000001526 ENSMAMG00000001568 ankrd6b (ENSMAMG00000001595) lyrm2 (ENSMAMG00000001625) MDN1 (ENSMAMG00000001678) casp8ap2 (ENSMAMG00000002538) GJA10 (ENSMAMG00000002566) BACH2 (ENSMAMG00000002574) map3k7 (ENSMAMG00000002593) ENSMAMG00000026462 ENSMAMG00000026311 ENSMAMG00000002973 UFL1 (ENSMAMG00000003053) nt5dc1 (ENSMAMG00000003150) ENSMAMG00000003205 dse (ENSMAMG00000003223) #22 ENSMAMG00000026714 ENSMAMG00000003246 FRK (ENSMAMG00000003256) ENSMAMG00000017188 ENSMAMG00000003312 HDAC2 (ENSMAMG00000003340) ENSMAMG00000027627 ENSMAMG00000024743 ENSMAMG00000003456 tube1 (ENSMAMG00000003851) CCN6 (ENSMAMG00000003901) ENSMAMG00000003930 FYN (ENSMAMG00000004025) ENSMAMG00000004177 REV3L (ENSMAMG00000004205) Eupercaria ANCESTRAL SPECIES 28 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Tetraodontidae ANCESTRAL SPECIES 111 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000155462.`b.b ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT01030000234896 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a Fugu MODERN SPECIES 7 REV3L (ENSTRUG00000002617) ENSTRUG00000028393 fynb (ENSTRUG00000003538) ccn6 (ENSTRUG00000031337) tube1 (ENSTRUG00000005085) dnal1 (ENSTRUG00000024991) ENSTRUG00000005418 marcksa (ENSTRUG00000007040) HDAC2 (ENSTRUG00000006770) ENSTRUG00000027983 HS3ST5 (ENSTRUG00000006751) FRK (ENSTRUG00000006360) nt5dc1 (ENSTRUG00000006279) COL10A1 (ENSTRUG00000031328) ENSTRUG00000030927 dse (ENSTRUG00000006239) #22 ENSTRUG00000030826 GPR63 (ENSTRUG00000006192) LRFN2 (ENSTRUG00000006117) zgc:112001 (ENSTRUG00000006108) olfcb1 (ENSTRUG00000005155) ENSTRUG00000025343 ENSTRUG00000032623 znf292b (ENSTRUG00000030479) gjb7 (ENSTRUG00000004810) rad51 (ENSTRUG00000004357) rmdn3 (ENSTRUG00000020305) si:ch211-241j12.3 (ENSTRUG00000024604) ENSTRUG00000032162 cfap206 (ENSTRUG00000003972) cfap206 (ENSTRUG00000026192) Tetraodon MODERN SPECIES 5 marcksa (ENSTNIG00000005165) HDAC2 (ENSTNIG00000005164) HS3ST5 (ENSTNIG00000005163) FRK (ENSTNIG00000005162) nt5dc1 (ENSTNIG00000005161) dse (ENSTNIG00000005160) #22 ENSTNIG00000005159 GPR63 (ENSTNIG00000005158) olfcb1 (ENSTNIG00000019195) znf292b (ENSTNIG00000019194) gjb7 (ENSTNIG00000019193) rad51 (ENSTNIG00000019192) rmdn3 (ENSTNIG00000019191) ENSTNIG00000019190 cfap206 (ENSTNIG00000019189) ENSTNIG00000000240 ENSTNIG00000019188 ENSTNIG00000019186 PM20D2 (ENSTNIG00000019185) ptchd4 (ENSTNIG00000000828) ptchd4 (ENSTNIG00000019184) Eupecaria_A ANCESTRAL SPECIES 27 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00940000165360 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a Ballan wrasse MODERN SPECIES 91 ENSLBEG00000011656 ENSLBEG00000011639 fynb (ENSLBEG00000011605) ENSLBEG00000011543 ccn6 (ENSLBEG00000011511) tube1 (ENSLBEG00000011473) ENSLBEG00000011176 ENSLBEG00000010971 marcksa (ENSLBEG00000010946) ENSLBEG00000010923 HDAC2 (ENSLBEG00000010831) HS3ST5 (ENSLBEG00000010782) FRK (ENSLBEG00000010745) COL10A1 (ENSLBEG00000010716) nt5dc1 (ENSLBEG00000010663) dse (ENSLBEG00000010614) #22 NDUFAF4 (ENSLBEG00000010595) GPR63 (ENSLBEG00000010582) ufl1 (ENSLBEG00000010496) ENSLBEG00000009883 epha7 (ENSLBEG00000009681) Eupecaria_B ANCESTRAL SPECIES 29 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Eupecaria_C ANCESTRAL SPECIES 36 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a European seabass MODERN SPECIES 7 REV3L (ENSDLAG00005012155) ENSDLAG00005012131 fynb (ENSDLAG00005010553) ENSDLAG00005010491 CCN6 (ENSDLAG00005033113) tube1 (ENSDLAG00005010286) ENSDLAG00005027880 ENSDLAG00005028134 MARCKS (ENSDLAG00005029034) ENSDLAG00005010073 HDAC2 (ENSDLAG00005009118) FRK (ENSDLAG00005009085) ENSDLAG00005009075 COL10A1 (ENSDLAG00005009072) NT5DC1 (ENSDLAG00005029124) ENSDLAG00005009031 #22 NDUFAF4 (ENSDLAG00005009019) GPR63 (ENSDLAG00005034962) ufl1 (ENSDLAG00005008918) epha7 (ENSDLAG00005008250) ENSDLAG00005027871 map3k7 (ENSDLAG00005007772) ENSDLAG00005007749 ENSDLAG00005007741 BACH2 (ENSDLAG00005007725) GJA10 (ENSDLAG00005007716) casp8ap2 (ENSDLAG00005007702) ENSDLAG00005007692 MDN1 (ENSDLAG00005005914) lyrm2 (ENSDLAG00005026971) ankrd6b (ENSDLAG00005005390) Large yellow croaker MODERN SPECIES 482 ENSLCRG00005003657 tube1 (ENSLCRG00005003661) ccn6 (ENSLCRG00005003662) ENSLCRG00005003676 ENSLCRG00005004175 ENSLCRG00005004180 ENSLCRG00005004182 ENSLCRG00005004185 marcksa (ENSLCRG00005004187) HDAC2 (ENSLCRG00005004219) ENSLCRG00005006339 HS3ST5 (ENSLCRG00005006340) FRK (ENSLCRG00005006342) nt5dc1 (ENSLCRG00005006346) COL10A1 (ENSLCRG00005006363) dse (ENSLCRG00005006365) #22 NDUFAF4 (ENSLCRG00005006369) GPR63 (ENSLCRG00005006370) ufl1 (ENSLCRG00005006384) epha7 (ENSLCRG00005006440) map3k7 (ENSLCRG00005011095) BACH2 (ENSLCRG00005011452) GJA10 (ENSLCRG00005011457) casp8ap2 (ENSLCRG00005011459) MDN1 (ENSLCRG00005011477) LYRM2 (ENSLCRG00005011755) ankrd6b (ENSLCRG00005011762) GABRR2 (ENSLCRG00005011766) ube2j1 (ENSLCRG00005011774) GABRR1 (ENSLCRG00005011782) PM20D2 (ENSLCRG00005012085) Gilthead seabream MODERN SPECIES 14 ccn6 (ENSSAUG00010006415) tube1 (ENSSAUG00010006411) ENSSAUG00010005436 ENSSAUG00010005419 ENSSAUG00010005418 ENSSAUG00010005417 ENSSAUG00010005415 ENSSAUG00010005414 ENSSAUG00010005392 HDAC2 (ENSSAUG00010005197) ENSSAUG00010005188 HS3ST5 (ENSSAUG00010005186) FRK (ENSSAUG00010005174) COL10A1 (ENSSAUG00010005171) nt5dc1 (ENSSAUG00010005011) dse (ENSSAUG00010005008) #22 NDUFAF4 (ENSSAUG00010005007) GPR63 (ENSSAUG00010005006) ufl1 (ENSSAUG00010005005) epha7 (ENSSAUG00010004890) ENSSAUG00010004868 map3k7 (ENSSAUG00010004684) BACH2 (ENSSAUG00010004667) GJA10 (ENSSAUG00010004665) ENSSAUG00010004660 MDN1 (ENSSAUG00010004521) lyrm2 (ENSSAUG00010004496) ENSSAUG00010004493 ankrd6b (ENSSAUG00010004486) GABRR2 (ENSSAUG00010004484) ENSSAUG00010004482 Perciformes ANCESTRAL SPECIES 14 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000016036 Perciformes_a ANCESTRAL SPECIES 32 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000016036 Channel bull blenny MODERN SPECIES 16 mfsd4b (ENSCGOG00000007176) REV3L (ENSCGOG00000007186) ENSCGOG00000007434 ENSCGOG00000007436 fynb (ENSCGOG00000007518) ccn6 (ENSCGOG00000013798) tube1 (ENSCGOG00000013815) ENSCGOG00000013884 ENSCGOG00000014291 marcksa (ENSCGOG00000014296) HDAC2 (ENSCGOG00000014421) HS3ST5 (ENSCGOG00000014548) FRK (ENSCGOG00000014554) nt5dc1 (ENSCGOG00000014568) COL10A1 (ENSCGOG00000014774) dse (ENSCGOG00000014783) #22 NDUFAF4 (ENSCGOG00000014784) GPR63 (ENSCGOG00000014785) ufl1 (ENSCGOG00000014789) ENSCGOG00000015295 ENSCGOG00000015296 epha7 (ENSCGOG00000015338) ENSCGOG00000017395 map3k7 (ENSCGOG00000017412) BACH2 (ENSCGOG00000018402) GJA10 (ENSCGOG00000018404) casp8ap2 (ENSCGOG00000018408) MDN1 (ENSCGOG00000018451) ankrd6b (ENSCGOG00000018990) LYRM2 (ENSCGOG00000019332) GABRR2 (ENSCGOG00000019336) Pike perch MODERN SPECIES 68 mfsd4b (ENSSLUG00000023137) REV3L (ENSSLUG00000023114) ENSSLUG00000023105 fynb (ENSSLUG00000021489) ENSSLUG00000021392 ccn6 (ENSSLUG00000021361) tube1 (ENSSLUG00000021346) ENSSLUG00000020451 ENSSLUG00000020359 marcksa (ENSSLUG00000020356) HS3ST5 (ENSSLUG00000020351) ENSSLUG00000020346 FRK (ENSSLUG00000020340) COL10A1 (ENSSLUG00000020339) nt5dc1 (ENSSLUG00000020316) dse (ENSSLUG00000020307) #22 NDUFAF4 (ENSSLUG00000020300) GPR63 (ENSSLUG00000020297) ufl1 (ENSSLUG00000020261) ENSSLUG00000020249 epha7 (ENSSLUG00000018142) ENSSLUG00000018048 ENSSLUG00000018046 ENSSLUG00000018039 map3k7 (ENSSLUG00000017993) BACH2 (ENSSLUG00000017980) GJA10 (ENSSLUG00000017979) casp8ap2 (ENSSLUG00000017975) Cottioidei ANCESTRAL SPECIES 28 ENSGT00940000155089.r.a ENSGT00390000013943 ENSGT00940000154856.B.d ENSGT00940000162752 ENSGT00990000203619.A.b.b.a.g ENSGT00990000203619.A.b.b.a.h ENSGT00940000165219 ENSGT00940000153417.B ENSGT00940000157241 ENSGT00940000164252.a.a ENSGT00940000154004.b ENSGT00940000154473.b ENSGT00940000160891 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D.a ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000167164 ENSGT00390000002112 ENSGT00940000156987 ENSGT00940000158991 ENSGT00730000111419.a ENSGT00940000163149.a.b.c.a.a ENSGT00940000165424.b ENSGT00940000155723 Lumpfish MODERN SPECIES 16 igf2r (ENSCLMG00005003732) ENSCLMG00005012636 ttll2 (ENSCLMG00005012637) GPR31 (ENSCLMG00005012642) ENSCLMG00005012643 msraa (ENSCLMG00005012644) ift172 (ENSCLMG00005012648) cad (ENSCLMG00005012859) dnajc5ga (ENSCLMG00005017743) trim54 (ENSCLMG00005017749) uts1 (ENSCLMG00005017821) mpv17 (ENSCLMG00005017824) ENSCLMG00005017833 nt5dc1 (ENSCLMG00005017839) COL10A1 (ENSCLMG00005017840) dse (ENSCLMG00005017841) #22 ENSCLMG00005017842 GPR63 (ENSCLMG00005017843) MDN1 (ENSCLMG00005017846) ENSCLMG00005017851 GJA10 (ENSCLMG00005017852) BACH2 (ENSCLMG00005017853) map3k7 (ENSCLMG00005017854) ENSCLMG00005017864 epha7 (ENSCLMG00005017869) ufl1 (ENSCLMG00005018328) lyrm2 (ENSCLMG00005018343) FRK (ENSCLMG00005018344) HS3ST5 (ENSCLMG00005018345) ENSCLMG00005018347 ENSCLMG00005018348 Stickleback MODERN SPECIES 18 slc22a2 (ENSGACG00000005916) slc22a2 (ENSGACG00000005924) igf2r (ENSGACG00000005960) ENSGACG00000005977 GPR31 (ENSGACG00000005987) msraa (ENSGACG00000005989) ift172 (ENSGACG00000006020) cad (ENSGACG00000006047) dnajc5ga (ENSGACG00000006091) trim54 (ENSGACG00000006098) uts1 (ENSGACG00000006113) mpv17 (ENSGACG00000006119) papola (ENSGACG00000006142) nt5dc1 (ENSGACG00000006155) COL10A1 (ENSGACG00000006168) dse (ENSGACG00000006171) #22 ENSGACG00000006177 GPR63 (ENSGACG00000006185) MDN1 (ENSGACG00000006188) ENSGACG00000006239 GJA10 (ENSGACG00000006243) BACH2 (ENSGACG00000006245) map3k7 (ENSGACG00000006251) ENSGACG00000006261 epha7 (ENSGACG00000006268) ufl1 (ENSGACG00000006287) FRK (ENSGACG00000006319) HS3ST5 (ENSGACG00000006332) marcksa (ENSGACG00000006334) ENSGACG00000006336 ENSGACG00000006339 Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00390000003365.a ENSGT00940000158591.g.a ENSGT00940000156652 Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000177477 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Pomacentridae ANCESTRAL SPECIES 21 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000180297 ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.e ENSGT00940000154317.a.b.b ENSGT00940000155676.f ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a ENSGT00390000003365.a Pomacentridae_A ANCESTRAL SPECIES 25 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00730000111419.a ENSGT00940000180297 ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676.e ENSGT00940000154317.a.b.b ENSGT00940000155676.f ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 Amphiprion ANCESTRAL SPECIES 14 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a.c ENSGT00940000163149.a.b.c.a.a.d ENSGT00730000111419.a ENSGT00940000180297 ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676.f ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 Clown anemonefish MODERN SPECIES 3191 tube1 (ENSAOCG00000008631) ENSAOCG00000008570 ENSAOCG00000008500 ENSAOCG00000008394 marcksa (ENSAOCG00000008380) ENSAOCG00000008373 HDAC2 (ENSAOCG00000008362) ENSAOCG00000008331 HS3ST5 (ENSAOCG00000008311) FRK (ENSAOCG00000008294) ENSAOCG00000008251 ENSAOCG00000008229 ENSAOCG00000008216 nt5dc1 (ENSAOCG00000008202) COL10A1 (ENSAOCG00000008159) dse (ENSAOCG00000008149) #22 ENSAOCG00000008121 GPR63 (ENSAOCG00000008117) Orange clownfish MODERN SPECIES 2 ENSAPEG00000002470 ENSAPEG00000002452 ENSAPEG00000002444 ENSAPEG00000002436 ENSAPEG00000002427 ENSAPEG00000002371 ENSAPEG00000002351 ENSAPEG00000002335 ENSAPEG00000002321 ENSAPEG00000002307 ENSAPEG00000002195 ENSAPEG00000002159 ENSAPEG00000002125 COL10A1 (ENSAPEG00000002103) nt5dc1 (ENSAPEG00000002067) dse (ENSAPEG00000002027) #22 NDUFAF4 (ENSAPEG00000002010) GPR63 (ENSAPEG00000001986) ufl1 (ENSAPEG00000001918) epha7 (ENSAPEG00000001858) map3k7 (ENSAPEG00000001736) BACH2 (ENSAPEG00000001692) GJA10 (ENSAPEG00000001644) ENSAPEG00000001637 MDN1 (ENSAPEG00000001304) GABRR2 (ENSAPEG00000001260) ube2j1 (ENSAPEG00000001252) ENSAPEG00000001207 PM20D2 (ENSAPEG00000001176) cfap206 (ENSAPEG00000001144) ENSAPEG00000001128 Spiny chromis MODERN SPECIES 168 nt5dc1 (ENSAPOG00000016754) dse (ENSAPOG00000016741) #22 NDUFAF4 (ENSAPOG00000016719) GPR63 (ENSAPOG00000016713) ufl1 (ENSAPOG00000016691) epha7 (ENSAPOG00000016604) ENSAPOG00000016592 Bicolor damselfish MODERN SPECIES 1512 FRK (ENSSPAG00000006162) COL10A1 (ENSSPAG00000006152) nt5dc1 (ENSSPAG00000006135) dse (ENSSPAG00000006118) #22 NDUFAF4 (ENSSPAG00000006109) GPR63 (ENSSPAG00000006104) Cichlidae ANCESTRAL SPECIES 46 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000177477 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000156535 ENSGT00620000087993.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000164440 ENSGT00390000002768.b ENSGT00940000179970 ENSGT00950000183034.C.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00940000156226 ENSGT00940000170463 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000164440 ENSGT00390000002768.b ENSGT00950000183034.C.a.a ENSGT01030000234513.A.a.b Haplochromini ANCESTRAL SPECIES 23 ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT01090000260981.a ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b.q ENSGT00940000155887.b.r.b ENSGT00940000164440 ENSGT00390000002768.b ENSGT00950000183034.C.a.a Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000155462.`b.b ENSGT00940000164843.a.a.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000154348.c.b.b.a.b.d.b.h.a.b ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b.q ENSGT00940000164440 ENSGT00390000002768.b ENSGT00950000183034.C.a.a Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00940000157966 ENSGT00530000063320.B ENSGT00940000156226 ENSGT00940000164609.a ENSGT00940000155462.`b.b ENSGT00940000164843.a.a.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000154348.c.b.b.a.b.d.b.h.a.b ENSGT00940000157785 ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b.q ENSGT00940000164440 ENSGT00390000002768.b ENSGT00950000183034.C.a.a Eastern happy MODERN SPECIES 6 mfsd4b (ENSACLG00000018795) REV3L (ENSACLG00000018811) ENSACLG00000018859 fynb (ENSACLG00000018933) ENSACLG00000019018 ccn6 (ENSACLG00000019051) tube1 (ENSACLG00000019080) ENSACLG00000019136 marcksa (ENSACLG00000019233) HDAC2 (ENSACLG00000019252) HS3ST5 (ENSACLG00000019391) ENSACLG00000019457 FRK (ENSACLG00000019463) nt5dc1 (ENSACLG00000019484) COL10A1 (ENSACLG00000019556) dse (ENSACLG00000019583) #22 NDUFAF4 (ENSACLG00000019594) GPR63 (ENSACLG00000019598) ufl1 (ENSACLG00000019612) ENSACLG00000019726 epha7 (ENSACLG00000019736) ENSACLG00000019784 ENSACLG00000019791 ENSACLG00000019834 ENSACLG00000019837 ENSACLG00000019872 map3k7 (ENSACLG00000019887) ENSACLG00000020009 BACH2 (ENSACLG00000020016) GJA10 (ENSACLG00000020033) ENSACLG00000020049 Zebra mbuna MODERN SPECIES 1097 slc16a10 (ENSMZEG00005015648) mfsd4b (ENSMZEG00005015667) REV3L (ENSMZEG00005015682) ENSMZEG00005015702 fynb (ENSMZEG00005015722) ENSMZEG00005015743 ccn6 (ENSMZEG00005015756) tube1 (ENSMZEG00005015763) ENSMZEG00005015787 marcksa (ENSMZEG00005015838) HDAC2 (ENSMZEG00005015845) HS3ST5 (ENSMZEG00005015855) FRK (ENSMZEG00005015874) nt5dc1 (ENSMZEG00005015890) COL10A1 (ENSMZEG00005015905) dse (ENSMZEG00005015912) #22 NDUFAF4 (ENSMZEG00005015921) GPR63 (ENSMZEG00005015923) ufl1 (ENSMZEG00005015928) ENSMZEG00005015945 epha7 (ENSMZEG00005015956) ENSMZEG00005015978 ENSMZEG00005015985 ENSMZEG00005015990 ube2j1 (ENSMZEG00005015995) ENSMZEG00005016004 GABRR2 (ENSMZEG00005016015) recql (ENSMZEG00005016027) GOLT1B (ENSMZEG00005016034) spx (ENSMZEG00005016040) gys2 (ENSMZEG00005016045) P. nyererei MODERN SPECIES 460 FRK (ENSPNYG00000017470) COL10A1 (ENSPNYG00000017459) nt5dc1 (ENSPNYG00000017426) ENSPNYG00000017411 dse (ENSPNYG00000017386) #22 NDUFAF4 (ENSPNYG00000017375) GPR63 (ENSPNYG00000017369) ufl1 (ENSPNYG00000017311) epha7 (ENSPNYG00000017251) ENSPNYG00000017222 Burton s mouthbrooder MODERN SPECIES 395 ENSHBUG00000021897 ENSHBUG00000021916 fynb (ENSHBUG00000021963) ENSHBUG00000021989 ccn6 (ENSHBUG00000021994) tube1 (ENSHBUG00000022009) ENSHBUG00000022026 marcksa (ENSHBUG00000022037) HDAC2 (ENSHBUG00000022068) HS3ST5 (ENSHBUG00000022092) ENSHBUG00000022104 FRK (ENSHBUG00000022132) COL10A1 (ENSHBUG00000022135) ENSHBUG00000022148 nt5dc1 (ENSHBUG00000022187) dse (ENSHBUG00000022208) #22 NDUFAF4 (ENSHBUG00000022222) GPR63 (ENSHBUG00000022229) ufl1 (ENSHBUG00000022275) Lyretail cichlid MODERN SPECIES 333 ENSNBRG00000011189 ENSNBRG00000011201 ENSNBRG00000011215 fynb (ENSNBRG00000011225) ENSNBRG00000011258 ccn6 (ENSNBRG00000011314) tube1 (ENSNBRG00000011358) ENSNBRG00000011389 marcksa (ENSNBRG00000011420) HDAC2 (ENSNBRG00000011433) HS3ST5 (ENSNBRG00000011470) FRK (ENSNBRG00000011483) nt5dc1 (ENSNBRG00000011520) COL10A1 (ENSNBRG00000011556) ENSNBRG00000011576 dse (ENSNBRG00000011590) #22 NDUFAF4 (ENSNBRG00000011600) GPR63 (ENSNBRG00000011608) ufl1 (ENSNBRG00000011618) epha7 (ENSNBRG00000011772) ENSNBRG00000012548 ENSNBRG00000012567 ENSNBRG00000012582 ENSNBRG00000012595 map3k7 (ENSNBRG00000012646) BACH2 (ENSNBRG00000013186) GJA10 (ENSNBRG00000013201) casp8ap2 (ENSNBRG00000013219) MDN1 (ENSNBRG00000013284) LYRM2 (ENSNBRG00000013657) ENSNBRG00000013661 Nile tilapia MODERN SPECIES 6 fynb (ENSONIG00000011372) ENSONIG00000031292 ccn6 (ENSONIG00000011364) tube1 (ENSONIG00000011362) ENSONIG00000035627 ENSONIG00000011356 ENSONIG00000042152 ENSONIG00000029058 marcks (ENSONIG00000033764) HDAC2 (ENSONIG00000011350) HS3ST5 (ENSONIG00000011349) FRK (ENSONIG00000011345) COL10A1 (ENSONIG00000011344) ENSONIG00000040979 nt5dc1 (ENSONIG00000011339) dse (ENSONIG00000011338) #22 ndufaf4 (ENSONIG00000042678) GPR63 (ENSONIG00000011335) ufl1 (ENSONIG00000011332) ENSONIG00000030954 epha7 (ENSONIG00000011317) ENSONIG00000028912 ENSONIG00000042217 ENSONIG00000036489 ENSONIG00000034375 ENSONIG00000036209 ENSONIG00000036896 ENSONIG00000031642 ENSONIG00000031156 MAP3K7 (ENSONIG00000001600) BACH2 (ENSONIG00000001606) Midas cichlid MODERN SPECIES 95 FRK (ENSACIG00000023465) COL10A1 (ENSACIG00000023463) nt5dc1 (ENSACIG00000023453) dse (ENSACIG00000023447) #22 NDUFAF4 (ENSACIG00000023443) GPR63 (ENSACIG00000023440) ufl1 (ENSACIG00000023423) ENSACIG00000023415 ENSACIG00000023411 ENSACIG00000023406 epha7 (ENSACIG00000023399) Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00940000166133 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00940000163149.a.b.c.a.a ENSGT00940000159970 ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000177477 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT01030000235133.a.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 Oryzias ANCESTRAL SPECIES 38 ENSGT00900000141110 ENSGT00390000003855.b.e.b ENSGT00940000167177 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000177477 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT01030000235133.a.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 Oryzias_b ANCESTRAL SPECIES 55 ENSGT00940000153635.B ENSGT00900000141110 ENSGT00390000003855.b.e.b ENSGT00940000167177 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00940000167164 ENSGT00940000157785 ENSGT00940000158228.a ENSGT00940000167916 ENSGT01090000260070.D.a ENSGT01030000235133.a.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a Indian medaka MODERN SPECIES 22 vps18 (ENSOMEG00000003811) ino80 (ENSOMEG00000003791) chac1 (ENSOMEG00000003717) dll4 (ENSOMEG00000003701) fynb (ENSOMEG00000003649) ENSOMEG00000003626 ccn6 (ENSOMEG00000003611) tube1 (ENSOMEG00000003592) ENSOMEG00000003553 marcksa (ENSOMEG00000003511) HDAC2 (ENSOMEG00000003501) HS3ST5 (ENSOMEG00000003464) FRK (ENSOMEG00000003439) nt5dc1 (ENSOMEG00000003405) COL10A1 (ENSOMEG00000003386) dse (ENSOMEG00000003376) #22 ENSOMEG00000003363 GPR63 (ENSOMEG00000003355) e2f6 (ENSOMEG00000003348) hivep2a (ENSOMEG00000003314) clpp (ENSOMEG00000003271) aldh3b1 (ENSOMEG00000003237) ppp4cb (ENSOMEG00000003223) zgc:86896 (ENSOMEG00000003180) wipi1 (ENSOMEG00000003137) SLC16A6 (ENSOMEG00000000066) gna13a (ENSOMEG00000003099) rgs9a (ENSOMEG00000003083) COG1 (ENSOMEG00000003049) ENSOMEG00000003034 glyr1 (ENSOMEG00000003013) Javanese ricefish MODERN SPECIES 16 RNF8 (ENSOJAG00000019370) ENSOJAG00000019359 tmem151ba (ENSOJAG00000019342) nfkbie (ENSOJAG00000019334) slc35b2 (ENSOJAG00000019284) hsp90ab1 (ENSOJAG00000018199) rbm25b (ENSOJAG00000018091) eif2s1b (ENSOJAG00000018078) atp6v1d (ENSOJAG00000017892) pals1b (ENSOJAG00000017852) gphnb (ENSOJAG00000017530) FUT8 (ENSOJAG00000017463) FRK (ENSOJAG00000017360) COL10A1 (ENSOJAG00000017354) nt5dc1 (ENSOJAG00000017285) dse (ENSOJAG00000017271) #22 ENSOJAG00000017266 GPR63 (ENSOJAG00000017255) ENSOJAG00000017232 ENSOJAG00000017103 ENSOJAG00000017079 epha7 (ENSOJAG00000014690) map3k7 (ENSOJAG00000014402) ENSOJAG00000014396 ENSOJAG00000014381 GJA10 (ENSOJAG00000014372) ENSOJAG00000014333 LYRM2 (ENSOJAG00000018070) ankrd6b (ENSOJAG00000018034) ENSOJAG00000018030 GABRR2 (ENSOJAG00000017969) Oryzias_a ANCESTRAL SPECIES 48 ENSGT00900000141110 ENSGT00390000003855.b.e.b ENSGT00940000167177 ENSGT00940000155462.`b.b ENSGT00940000164843.a ENSGT00940000160119 ENSGT00940000155723 ENSGT00940000165424.b ENSGT00730000111419.a ENSGT00940000177477 ENSGT00940000155725 ENSGT00940000158991 ENSGT00940000156987 ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 ENSGT00940000167164 ENSGT00940000157785 ENSGT00950000182892.b.b ENSGT00940000158228.a ENSGT01090000260070.D.a ENSGT00620000088063 ENSGT00550000074802 ENSGT00390000002957 ENSGT00940000155887.b ENSGT00940000156864.d ENSGT00940000156652 ENSGT00940000158591.g.a Japanese Medaka HdrR MODERN SPECIES 16 ino80 (ENSORLG00000018028) chac1 (ENSORLG00000023085) dll4 (ENSORLG00000018020) fynb (ENSORLG00000018018) ENSORLG00000018016 ccn6 (ENSORLG00000018013) tube1 (ENSORLG00000018008) ENSORLG00000017997 marcksa (ENSORLG00000017991) ENSORLG00000026848 HDAC2 (ENSORLG00000017990) HS3ST5 (ENSORLG00000024718) FRK (ENSORLG00000017982) COL10A1 (ENSORLG00000027315) nt5dc1 (ENSORLG00000017979) dse (ENSORLG00000021842) #22 NDUFAF4 (ENSORLG00000017975) GPR63 (ENSORLG00000017974) ufl1 (ENSORLG00000017971) epha7 (ENSORLG00000017959) map3k7 (ENSORLG00000017940) ENSORLG00000029360 BACH2 (ENSORLG00000017926) GJA10 (ENSORLG00000017923) casp8ap2 (ENSORLG00000017922) MDN1 (ENSORLG00000017913) LYRM2 (ENSORLG00000017896) ankrd6b (ENSORLG00000025812) ENSORLG00000017892 ube2j1 (ENSORLG00000017888) gabrr1 (ENSORLG00000017884) Chinese medaka MODERN SPECIES 242 FRK (ENSOSIG00000019135) COL10A1 (ENSOSIG00000019130) nt5dc1 (ENSOSIG00000019127) dse (ENSOSIG00000019126) #22 ENSOSIG00000019124 GPR63 (ENSOSIG00000019121) Cyprinodontiformes ANCESTRAL SPECIES 54 ENSGT00620000087993.a.a ENSGT00940000156535 ENSGT00940000158591.g.a ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000155887.b ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D.a ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000167164 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Aplocheiloidei ANCESTRAL SPECIES 269 ENSGT00940000156987 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Mangrove rivulus MODERN SPECIES 182 psmc6 (ENSKMAG00000003814) cgrrf1 (ENSKMAG00000003867) hsf2 (ENSKMAG00000003877) ENSKMAG00000003890 ENSKMAG00000003903 gja1b (ENSKMAG00000003917) ENSKMAG00000003928 ENSKMAG00000003945 mcm9 (ENSKMAG00000003963) ENSKMAG00000003993 gopc (ENSKMAG00000004021) nt5dc1 (ENSKMAG00000004061) COL10A1 (ENSKMAG00000004096) dse (ENSKMAG00000004110) #22 ENSKMAG00000004134 ENSKMAG00000004145 GPR63 (ENSKMAG00000004155) ENSKMAG00000004182 ufl1 (ENSKMAG00000004199) Turquoise killifish MODERN SPECIES 52 DSE (ENSNFUG00015019504) #22 ENSNFUG00015019507 NDUFAF4 (ENSNFUG00015019509) GPR63 (ENSNFUG00015019512) ufl1 (ENSNFUG00015019516) Cyprinodontoidei ANCESTRAL SPECIES 84 ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000155887.b ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D.a ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000167164 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 NAME_4 ANCESTRAL SPECIES 387 ENSGT00940000156987.g ENSGT00940000154317.a.b.b ENSGT00940000155676 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Mummichog MODERN SPECIES 605 FRK (ENSFHEG00000005504) COL10A1 (ENSFHEG00000005519) nt5dc1 (ENSFHEG00000005562) dse (ENSFHEG00000005600) #22 NDUFAF4 (ENSFHEG00000000145) GPR63 (ENSFHEG00000005638) ufl1 (ENSFHEG00000005782) Sheepshead minnow MODERN SPECIES 1057 FRK (ENSCVAG00000006163) FRK (ENSCVAG00000006807) ENSCVAG00000006827 COL10A1 (ENSCVAG00000006836) nt5dc1 (ENSCVAG00000006946) dse (ENSCVAG00000006960) #22 Poeciliinae ANCESTRAL SPECIES 15 ENSGT00940000166728 ENSGT00950000182992.a.b.a.b ENSGT00940000156157 ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000155887.b ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D.a ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000167164 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Platyfish MODERN SPECIES 6 MDN1 (ENSXMAG00000014394) casp8ap2 (ENSXMAG00000014426) GJA10 (ENSXMAG00000014427) BACH2 (ENSXMAG00000028595) map3k7 (ENSXMAG00000004986) ENSXMAG00000022453 ENSXMAG00000023649 epha7 (ENSXMAG00000025190) ENSXMAG00000023935 ENSXMAG00000023207 ENSXMAG00000029228 nt5dc1 (ENSXMAG00000004762) COL10A1 (ENSXMAG00000004766) ENSXMAG00000028087 ENSXMAG00000024473 dse (ENSXMAG00000009005) #22 GPR63 (ENSXMAG00000018550) ufl1 (ENSXMAG00000025685) Poecilia ANCESTRAL SPECIES 9 ENSGT00940000166728 ENSGT00950000182992.a.b.a.b ENSGT00940000156157 ENSGT00940000156652 ENSGT00940000156864.d ENSGT00940000155887.b ENSGT00390000002957 ENSGT00550000074802 ENSGT00620000088063 ENSGT01090000260070.D.a ENSGT00940000158228.a ENSGT00940000157785 ENSGT00940000167164 ENSGT00940000155676 ENSGT00940000154317.a.b.b ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Guppy MODERN SPECIES 452 GABRR2 (ENSPREG00000001261) ankrd6b (ENSPREG00000001342) ENSPREG00000001352 LYRM2 (ENSPREG00000001357) MDN1 (ENSPREG00000001387) ENSPREG00000001435 casp8ap2 (ENSPREG00000001480) GJA10 (ENSPREG00000001496) BACH2 (ENSPREG00000001540) map3k7 (ENSPREG00000001558) ENSPREG00000001651 epha7 (ENSPREG00000001707) ENSPREG00000001860 nt5dc1 (ENSPREG00000001894) COL10A1 (ENSPREG00000001967) dse (ENSPREG00000001989) #22 NDUFAF4 (ENSPREG00000002024) GPR63 (ENSPREG00000002036) ufl1 (ENSPREG00000002073) CD2AP (ENSPREG00000002184) tnfrsf21 (ENSPREG00000002219) ENSPREG00000002230 NAME_6 ANCESTRAL SPECIES 503 ENSGT00390000006522.b #22 ENSGT00390000001627 ENSGT00950000183001.a.b.a ENSGT00390000002112 Amazon molly DUPLICATION Amazon molly DUPLICATION Amazon molly MODERN SPECIES 964 dse (ENSPFOG00000022383) #22 dse (ENSPFOG00000013729) #22 ENSPFOG00000013704 ctns (ENSPFOG00000013618) GPR63 (ENSPFOG00000020929) ufl1 (ENSPFOG00000013460) Amazon molly MODERN SPECIES 964 dse (ENSPFOG00000022383) #22 dse (ENSPFOG00000013729) #22 ENSPFOG00000013704 ctns (ENSPFOG00000013618) GPR63 (ENSPFOG00000020929) ufl1 (ENSPFOG00000013460) Amazon molly MODERN SPECIES 1161 ENSPFOG00000024037 #22 Elephant shark MODERN SPECIES 1556 ENSCMIG00000006285 ENSCMIG00000006280 vgll2a (ENSCMIG00000006277) rfx6 (ENSCMIG00000006276) #34 CCN6 (ENSCMIG00000006259) tube1 (ENSCMIG00000006239) ENSCMIG00000006232 LAMA4 (ENSCMIG00000005945) marcksa (ENSCMIG00000005799) ENSCMIG00000004990 HS3ST5 (ENSCMIG00000004787) ENSCMIG00000004784 ENSCMIG00000004781 ENSCMIG00000004696 nt5dc1 (ENSCMIG00000004627) dse (ENSCMIG00000004605) #22 calhm6 (ENSCMIG00000004602) #24 ENSCMIG00000004589 #25 CALHM4 (ENSCMIG00000004572) #27 rwdd1 (ENSCMIG00000004566) #28 ENSCMIG00000004561 ENSCMIG00000004556 ENSCMIG00000004541