Rodentia	ANCESTRAL SPECIES	23	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00730000110960.a.b	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00940000156446	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Myomorpha	ANCESTRAL SPECIES	35	ENSGT00940000156446	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Muroidea	ANCESTRAL SPECIES	81																ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Muroidea_A	ANCESTRAL SPECIES	12																ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000154846.b	ENSGT00390000006225	ENSGT00940000160618	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211 #7	ENSGT00940000156332 #8	ENSGT00940000163000 #9	ENSGT00940000155984 #10	ENSGT00940000159862 #11	ENSGT00940000159213 #12	ENSGT00940000159158 #13	ENSGT00940000154817.b.b.b #14	ENSGT00390000011515 #15	ENSGT00940000153568.B #16	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154846.b	ENSGT00390000006225	ENSGT00940000160618	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211 #7	ENSGT00940000156332 #8	ENSGT00940000163000 #9	ENSGT00940000155984 #10	ENSGT00940000159862 #11	ENSGT00940000159213 #12	ENSGT00940000159158 #13	ENSGT00940000154817.b.b.b #14	ENSGT00390000011515 #15	ENSGT00940000153568.B #16	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520.db.a #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154846.b	ENSGT00390000006225	ENSGT00940000160618	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211 #7	ENSGT00940000156332 #8	ENSGT00940000163000 #9	ENSGT00940000155984 #10	ENSGT00940000159862 #11	ENSGT00940000159213 #12	ENSGT00940000159158 #13	ENSGT00940000154817.b.b.b #14	ENSGT00390000011515.e #15	ENSGT00940000153568.B #16	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520.db.a.a.b.a.a #31	ENSGT00940000154520.db.a.a.a #33	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160618	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211 #7	ENSGT00940000156332 #8	ENSGT00940000163000 #9	ENSGT00940000155984 #10	ENSGT00940000159862 #11	ENSGT00940000159213 #12	ENSGT00940000159158 #13	ENSGT00940000154817.b.b.b #14	ENSGT00390000011515.e #15	ENSGT00940000153568.B #16	ENSGT00940000166101.b.b.b #20	ENSGT00940000164023.d #21	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520.db.a.a.b.b ##30	ENSGT00940000154520.db.a.b ##30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a
Mouse	MODERN SPECIES		Ptpn4 (ENSMUSG00000026384) #7	Epb41l5 (ENSMUSG00000026383) #8	Tmem185b (ENSMUSG00000098923) #9	Ralb (ENSMUSG00000004451) #10	Inhbb (ENSMUSG00000037035) #11	Gli2 (ENSMUSG00000048402) #12	Tfcp2l1 (ENSMUSG00000026380) #13	Clasp1 (ENSMUSG00000064302) #14	Nifk (ENSMUSG00000026377) #15	Tsn (ENSMUSG00000026374) #16	Gm29106 (ENSMUSG00000102030) #17	Gm7145 (ENSMUSG00000100617) #18	B020011L13Rik (ENSMUSG00000101303) #19	Gm19965 (ENSMUSG00000094429) #20	Cntnap5a (ENSMUSG00000070695) #21	Dsel (ENSMUSG00000038702) #22	Cdh19 (ENSMUSG00000047216) #23	Cdh7 (ENSMUSG00000026312) #24	Serpinb8 (ENSMUSG00000026315) #25	Serpinb10 (ENSMUSG00000092572) #26	Serpinb2 (ENSMUSG00000062345) #27	Serpinb7 (ENSMUSG00000067001) #28	Serpinb11 (ENSMUSG00000026327) #29	Serpinb3c (ENSMUSG00000073601) #30	Serpinb3b (ENSMUSG00000073602) #31	Serpinb3d (ENSMUSG00000058017) #32	Serpinb3a (ENSMUSG00000044594) #33	Serpinb13 (ENSMUSG00000048775) #34	Serpinb12 (ENSMUSG00000059956) #35	Serpinb5 (ENSMUSG00000067006) #36	Vps4b (ENSMUSG00000009907) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160618	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211 #7	ENSGT00940000156332 #8	ENSGT00940000163000 #9	ENSGT00940000155984 #10	ENSGT00940000159862 #11	ENSGT00940000159213 #12	ENSGT00940000159158 #13	ENSGT00940000154817.b.b.b #14	ENSGT00390000011515.e #15	ENSGT00940000153568.B #16	ENSGT00940000166101.b.b.b #20	ENSGT00940000164023.d #21	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520.db.a.a.b.b ##30	ENSGT00940000154520.db.a.b ##30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a
spretus	MODERN SPECIES		Sctr (MGP_SPRETEiJ_G0015325)	Cfap221 (MGP_SPRETEiJ_G0015324)	Tmem177 (MGP_SPRETEiJ_G0015323)	Ptpn4 (MGP_SPRETEiJ_G0015322) #7	Epb41l5 (MGP_SPRETEiJ_G0015321) #8	Tmem185b (MGP_SPRETEiJ_G0015320) #9	Ralb (MGP_SPRETEiJ_G0015319) #10	Inhbb (MGP_SPRETEiJ_G0015318) #11	Gli2 (MGP_SPRETEiJ_G0015317) #12	Tfcp2l1 (MGP_SPRETEiJ_G0015316) #13	Clasp1 (MGP_SPRETEiJ_G0015315) #14	Nifk (MGP_SPRETEiJ_G0015314) #15	Tsn (MGP_SPRETEiJ_G0015313) #16	Cntnap5a (MGP_SPRETEiJ_G0015312) #21	MGP_SPRETEiJ_G0015311	Dsel (MGP_SPRETEiJ_G0015310) #22	Cdh19 (MGP_SPRETEiJ_G0015309) #23	Cdh7 (MGP_SPRETEiJ_G0015308) #24	Serpinb8 (MGP_SPRETEiJ_G0015307) #25	MGP_SPRETEiJ_G0015306 #26	MGP_SPRETEiJ_G0009400 #26	Serpinb2 (MGP_SPRETEiJ_G0015305) #27	Serpinb7 (MGP_SPRETEiJ_G0015304) #28	Serpinb11 (MGP_SPRETEiJ_G0015303) #29	MGP_SPRETEiJ_G0015302 ##30	MGP_SPRETEiJ_G0015301 #33	MGP_SPRETEiJ_G0015300 #33	MGP_SPRETEiJ_G0015299 #33	Serpinb13 (MGP_SPRETEiJ_G0015298) #34	Serpinb12 (MGP_SPRETEiJ_G0015297) #35	Serpinb5 (MGP_SPRETEiJ_G0015296) #36
Ryukyu mouse	MODERN SPECIES		Tmem37 (MGP_CAROLIEiJ_G0014519)	MGP_CAROLIEiJ_G0014518	Cfap221 (MGP_CAROLIEiJ_G0014517)	Tmem177 (MGP_CAROLIEiJ_G0014516)	Ptpn4 (MGP_CAROLIEiJ_G0014515) #7	Epb41l5 (MGP_CAROLIEiJ_G0014514) #8	Tmem185b (MGP_CAROLIEiJ_G0014513) #9	Ralb (MGP_CAROLIEiJ_G0014512) #10	Inhbb (MGP_CAROLIEiJ_G0014511) #11	Gli2 (MGP_CAROLIEiJ_G0014510) #12	Tfcp2l1 (MGP_CAROLIEiJ_G0014509) #13	Clasp1 (MGP_CAROLIEiJ_G0014508) #14	Nifk (MGP_CAROLIEiJ_G0014507) #15	Tsn (MGP_CAROLIEiJ_G0014506) #16	Cntnap5a (MGP_CAROLIEiJ_G0014505) #21	Dsel (MGP_CAROLIEiJ_G0014504) #22	Cdh19 (MGP_CAROLIEiJ_G0014503) #23	Cdh7 (MGP_CAROLIEiJ_G0014502) #24	MGP_CAROLIEiJ_G0014501	MGP_CAROLIEiJ_G0014500 #26	MGP_CAROLIEiJ_G0008940 #26	Serpinb2 (MGP_CAROLIEiJ_G0014499) #27	Serpinb7 (MGP_CAROLIEiJ_G0014498) #28	Serpinb11 (MGP_CAROLIEiJ_G0014497) #29	MGP_CAROLIEiJ_G0014496 #31	MGP_CAROLIEiJ_G0014495 #31	MGP_CAROLIEiJ_G0014494 #31	Serpinb13 (MGP_CAROLIEiJ_G0014493) #34	Serpinb12 (MGP_CAROLIEiJ_G0014492) #35	Serpinb5 (MGP_CAROLIEiJ_G0014491) #36	Vps4b (MGP_CAROLIEiJ_G0014490) #37
Shrew mouse	MODERN SPECIES	18	Tmem37 (MGP_PahariEiJ_G0027755)	MGP_PahariEiJ_G0027754	Cfap221 (MGP_PahariEiJ_G0027753)	Tmem177 (MGP_PahariEiJ_G0027752)	Ptpn4 (MGP_PahariEiJ_G0027751) #7	Epb41l5 (MGP_PahariEiJ_G0027750) #8	Tmem185b (MGP_PahariEiJ_G0027749) #9	Ralb (MGP_PahariEiJ_G0027748) #10	Inhbb (MGP_PahariEiJ_G0027747) #11	Gli2 (MGP_PahariEiJ_G0027746) #12	Tfcp2l1 (MGP_PahariEiJ_G0027745) #13	Clasp1 (MGP_PahariEiJ_G0027744) #14	Nifk (MGP_PahariEiJ_G0027743) #15	Tsn (MGP_PahariEiJ_G0027742) #16	MGP_PahariEiJ_G0027740	Dsel (MGP_PahariEiJ_G0027739) #22	Cdh19 (MGP_PahariEiJ_G0027738) #23	MGP_PahariEiJ_G0027737 #24	Serpinb8 (MGP_PahariEiJ_G0027736) #25	MGP_PahariEiJ_G0027735 #26	MGP_PahariEiJ_G0008428 #26	Serpinb2 (MGP_PahariEiJ_G0027734) #27	Serpinb7 (MGP_PahariEiJ_G0027733) #28	Serpinb11 (MGP_PahariEiJ_G0027732) #29	MGP_PahariEiJ_G0027731 #30	MGP_PahariEiJ_G0027730 ##30	MGP_PahariEiJ_G0027729 ##30	MGP_PahariEiJ_G0027728 #30	Serpinb13 (MGP_PahariEiJ_G0027727) #34	Serpinb12 (MGP_PahariEiJ_G0027726) #35	Serpinb5 (MGP_PahariEiJ_G0027725) #36
Rat	MODERN SPECIES	4	ENSRNOG00000064561	LOC304725 (ENSRNOG00000066325) ##21	LOC679594 (ENSRNOG00000069659)	ENSRNOG00000064688	AABR07020651.1 (ENSRNOG00000053423)	ENSRNOG00000064103	Cntnap5a (ENSRNOG00000070614) #21	ENSRNOG00000066965	LOC100910714 (ENSRNOG00000050463)	Hsp90aa1-ps16 (ENSRNOG00000062084)	LOC304725 (ENSRNOG00000029556) #21	ENSRNOG00000066881	ENSRNOG00000067316	ENSRNOG00000066834	ENSRNOG00000065529	Dsel (ENSRNOG00000032307) #22
Cricetidae	ANCESTRAL SPECIES	13																ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Cricetidae_B	ANCESTRAL SPECIES																	ENSGT00390000006522.a #22
Northern American deer mouse	MODERN SPECIES	2	Epb41l5 (ENSPEMG00000023844) #8	Tmem185b (ENSPEMG00000006946) #9	Ralb (ENSPEMG00000030915) #10	Inhbb (ENSPEMG00000029287) #11	Gli2 (ENSPEMG00000005696) #12	Tfcp2l1 (ENSPEMG00000006693) #13	Clasp1 (ENSPEMG00000001550) #14	ENSPEMG00000011134	ENSPEMG00000028884	Tsn (ENSPEMG00000027108) #16	Nifk (ENSPEMG00000023356) #15	ENSPEMG00000030618	ENSPEMG00000027032	ENSPEMG00000028525	ENSPEMG00000030045	Dsel (ENSPEMG00000019394) #22	ENSPEMG00000027925	Cdh19 (ENSPEMG00000023161) #23	ENSPEMG00000005004	ENSPEMG00000001863 #21	ENSPEMG00000027954	Cdh7 (ENSPEMG00000011724) #24	ENSPEMG00000026890	ENSPEMG00000025253	ENSPEMG00000007977	ENSPEMG00000011900	Serpinb8 (ENSPEMG00000027334) #25	Serpinb10 (ENSPEMG00000024020) #26	Serpinb2 (ENSPEMG00000021421) #27	Serpinb7 (ENSPEMG00000023263) #28	Serpinb11 (ENSPEMG00000010881) #29
Prairie vole	MODERN SPECIES	122					Serpinb5 (ENSMOCG00000001882) #36	Serpinb12 (ENSMOCG00000003241) #35	Serpinb13 (ENSMOCG00000000222) #34	ENSMOCG00000000546 #30	Serpinb11 (ENSMOCG00000012888) #29	Serpinb7 (ENSMOCG00000016598) #28	Serpinb2 (ENSMOCG00000000526) #27	Serpinb10 (ENSMOCG00000012072) #26	Serpinb8 (ENSMOCG00000000101) #25	Cdh7 (ENSMOCG00000000608) #24	Cdh19 (ENSMOCG00000017732) #23	Dsel (ENSMOCG00000017956) #22
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000010498	ENSGT00940000157675	ENSGT00390000015500	ENSGT00940000161584	ENSGT00390000013008	ENSGT01030000234573.B.c.b.a	ENSGT00940000159658	ENSGT00940000154815.a	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000155129.B	ENSGT00530000063557.b	ENSGT00390000015299.a.b.b.b	ENSGT00940000155483	ENSGT00940000161857	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Chinese hamster chok1gshd	MODERN SPECIES	2	Zfp36l2 (ENSCGRG00001023281)	Haao (ENSCGRG00001018533)	Mta3 (ENSCGRG00001014465)	Kcng3 (ENSCGRG00001022671)	ENSCGRG00001013778	Eml4 (ENSCGRG00001000928)	Pkdcc (ENSCGRG00001022104)	ENSCGRG00001016352	ENSCGRG00001018825	ENSCGRG00001016334	Slc8a1 (ENSCGRG00001013311)	Thumpd2 (ENSCGRG00001009939)	Tmem178 (ENSCGRG00001017231)	Map4k3 (ENSCGRG00001021583)	Cdkl4 (ENSCGRG00001011508)	Dsel (ENSCGRG00001009262) #22	ENSCGRG00001001905	ENSCGRG00001024022	Cdh19 (ENSCGRG00001022811) #23	Cdh7 (ENSCGRG00001022390) #24	Serpinb8 (ENSCGRG00001020741) #25	Serpinb10 (ENSCGRG00001018662) #26	Serpinb2 (ENSCGRG00001014826) #27	ENSCGRG00001013756 #28	ENSCGRG00001016113 #28	Serpinb11 (ENSCGRG00001013872) #29	ENSCGRG00001009018 #30	Serpinb13 (ENSCGRG00001006266) #34	Serpinb12 (ENSCGRG00001024353) #35	Serpinb5 (ENSCGRG00001022199) #36	ENSCGRG00001017700 #37
Golden Hamster	MODERN SPECIES	687	Plekhh2 (ENSMAUG00000016952)	Thada (ENSMAUG00000000902)	Haao (ENSMAUG00000019266)	ENSMAUG00000016202	Kcng3 (ENSMAUG00000014985)	Cox7a2l (ENSMAUG00000018428)	Eml4 (ENSMAUG00000013403)	Pkdcc (ENSMAUG00000013224)	ENSMAUG00000013721	Slc8a1 (ENSMAUG00000014024)	Thumpd2 (ENSMAUG00000012866)	Tmem178 (ENSMAUG00000012400)	Map4k3 (ENSMAUG00000009684)	Cdkl4 (ENSMAUG00000006917)	ENSMAUG00000003712	Dsel (ENSMAUG00000001883) #22	ENSMAUG00000000688	Cdh19 (ENSMAUG00000003673) #23
Upper Galilee mountains blind mole rat	MODERN SPECIES	658																Dsel (ENSNGAG00000012611) #22	ENSNGAG00000013021
Lesser Egyptian jerboa	MODERN SPECIES	55	Adcyap1 (ENSJJAG00000024315)	Ndc80 (ENSJJAG00000020131)	Zfp516 (ENSJJAG00000016237)	ENSJJAG00000017663	Zadh2 (ENSJJAG00000013604)	Cndp1 (ENSJJAG00000022953)	Cndp2 (ENSJJAG00000013882)	Cyb5a (ENSJJAG00000020003)	Neto1 (ENSJJAG00000024284)	Cbln2 (ENSJJAG00000021520)	Socs6 (ENSJJAG00000017873)	ENSJJAG00000016953	ENSJJAG00000023825	Dok6 (ENSJJAG00000017009)	ENSJJAG00000011145	Dsel (ENSJJAG00000013330) #22	ENSJJAG00000018700 #23	Cdh7 (ENSJJAG00000019518) #24	Serpinb8 (ENSJJAG00000024051) #25	Serpinb10 (ENSJJAG00000012267) #26	Serpinb2 (ENSJJAG00000008877) #27	Serpinb7 (ENSJJAG00000019416) #28	Serpinb11 (ENSJJAG00000000317) #29	ENSJJAG00000013143 #30	Serpinb13 (ENSJJAG00000021980) #34	Serpinb12 (ENSJJAG00000000456) #35	ENSJJAG00000007840	Serpinb5 (ENSJJAG00000014688) #36	ENSJJAG00000007330	Vps4b (ENSJJAG00000017232) #37	Kdsr (ENSJJAG00000021281)
Kangaroo rat	MODERN SPECIES	362										Neto1 (ENSDORG00000015955)	ENSDORG00000026383	ENSDORG00000012045	ENSDORG00000027334	Dok6 (ENSDORG00000012442)	Tmx3 (ENSDORG00000008922)	Dsel (ENSDORG00000023862) #22	Cdh7 (ENSDORG00000016386) #24	Serpinb8 (ENSDORG00000006588) #25	Serpinb10 (ENSDORG00000006586) #26	Serpinb2 (ENSDORG00000006585) #27	Serpinb7 (ENSDORG00000006583) #28	Serpinb11 (ENSDORG00000025663) #29	ENSDORG00000013346 #30	ENSDORG00000013344 #30	Serpinb13 (ENSDORG00000012814) #34	Serpinb12 (ENSDORG00000024498) #35	Serpinb5 (ENSDORG00000008321) #36	Vps4b (ENSDORG00000008318) #37	Kdsr (ENSDORG00000002042)	Bcl2 (ENSDORG00000002041)	Phlpp1 (ENSDORG00000014723)
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00730000110960.a.b	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00730000110960.a.b	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00730000110960.a.b	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161205 #26	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a
Alpin marmot	MODERN SPECIES	62	CNDP1 (ENSMMMG00000018749)	CNDP2 (ENSMMMG00000018737)	DIPK1C (ENSMMMG00000018726)	C18orf63 (ENSMMMG00000018708)	CYB5A (ENSMMMG00000018693)	TIMM21 (ENSMMMG00000018686)	FBXO15 (ENSMMMG00000018675)	NETO1 (ENSMMMG00000018657)	CBLN2 (ENSMMMG00000018641)	SOCS6 (ENSMMMG00000018573)	RTTN (ENSMMMG00000018533)	ENSMMMG00000018526	DOK6 (ENSMMMG00000018509)	ENSMMMG00000018461	TMX3 (ENSMMMG00000018431)	DSEL (ENSMMMG00000018420) #22	CDH19 (ENSMMMG00000018404) #23	CDH7 (ENSMMMG00000018362) #24	ENSMMMG00000018352
Eurasian red squirrel	MODERN SPECIES	4	CNDP1 (ENSSVLG00005009579)	CNDP2 (ENSSVLG00005009505)	DIPK1C (ENSSVLG00005009432)	C18orf63 (ENSSVLG00005009351)	CYB5A (ENSSVLG00005009233)	TIMM21 (ENSSVLG00005009130)	FBXO15 (ENSSVLG00005009033)	NETO1 (ENSSVLG00005008955)	CBLN2 (ENSSVLG00005008889)	SOCS6 (ENSSVLG00005008849)	RTTN (ENSSVLG00005008360)	CD226 (ENSSVLG00005008245)	DOK6 (ENSSVLG00005008178)	CCDC102B (ENSSVLG00005008117)	TMX3 (ENSSVLG00005008051)	DSEL (ENSSVLG00005008021) #22	CDH19 (ENSSVLG00005007898) #23	ENSSVLG00005007845	CDH7 (ENSSVLG00005007708) #24	ENSSVLG00005007639	SERPINB8 (ENSSVLG00005007536) #25	SERPINB10 (ENSSVLG00005007481) #26	SERPINB2 (ENSSVLG00005007425) #27	SERPINB7 (ENSSVLG00005007358) #28	SERPINB11 (ENSSVLG00005007244) #29	ENSSVLG00005006246 #30	SERPINB13 (ENSSVLG00005005921) #34	SERPINB12 (ENSSVLG00005005864) #35	SERPINB5 (ENSSVLG00005005814) #36	VPS4B (ENSSVLG00005005723) #37	KDSR (ENSSVLG00005005623)
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00940000163731	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000000688	ENSHGLG00000047507	ENSHGLG00000045873	ENSHGLG00000047504	RTTN (ENSHGLG00000017738)	ENSHGLG00000000780	ENSHGLG00000048215	ENSHGLG00000046795	ENSHGLG00000000334	ENSHGLG00000000388	ENSHGLG00000045031	ENSHGLG00000025635	ENSHGLG00000002454	ENSHGLG00000049270	ENSHGLG00000044324	DSEL (ENSHGLG00000001302) #22	ENSHGLG00000035367	ENSHGLG00000044063	CDH19 (ENSHGLG00000001249) #23	CDH7 (ENSHGLG00000001169) #24	SERPINB8 (ENSHGLG00000050036) #25	SERPINB2 (ENSHGLG00000001127) #27	SERPINB7 (ENSHGLG00000002536) #28	SERPINB11 (ENSHGLG00000002502) #29	ENSHGLG00000002364 #30	SERPINB4 (ENSHGLG00000035185) #30	SERPINB13 (ENSHGLG00000002083) #34	SERPINB12 (ENSHGLG00000002022) #35	SERPINB5 (ENSHGLG00000050355) #36	ENSHGLG00000001894 #37	KDSR (ENSHGLG00000038343)
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00940000156446	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a
Guinea pig	MODERN SPECIES	57	PTGR3 (ENSCPOG00000024070)	ENSCPOG00000026737	CNDP1 (ENSCPOG00000038292)	CNDP2 (ENSCPOG00000004578)	ENSCPOG00000002230	CYB5A (ENSCPOG00000012111)	TIMM21 (ENSCPOG00000011226)	FBXO15 (ENSCPOG00000006644)	NETO1 (ENSCPOG00000009520)	CBLN2 (ENSCPOG00000002004)	SOCS6 (ENSCPOG00000039204)	RTTN (ENSCPOG00000002661)	CD226 (ENSCPOG00000039994)	DOK6 (ENSCPOG00000003225)	TMX3 (ENSCPOG00000010485)	DSEL (ENSCPOG00000009231) #22	CDH19 (ENSCPOG00000000563) #23	CDH7 (ENSCPOG00000001747) #24
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00940000156446	ENSGT00940000160484	ENSGT00940000156500	ENSGT00390000006452.a	ENSGT00390000007627	ENSGT00940000156770	ENSGT00390000011552	ENSGT00390000017498	ENSGT00940000156700	ENSGT00940000159988	ENSGT00940000154847	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00930000151022.d	ENSGT00390000006522.a #22	ENSGT00940000160137 #23	ENSGT00940000157031 #24	ENSGT00940000154835.C #25	ENSGT00940000161637 #27	ENSGT00940000161520 #28	ENSGT00940000161560 #29	ENSGT00940000154520 #30	ENSGT00940000162214 #34	ENSGT00940000161829 #35	ENSGT00940000160674 #36	ENSGT00940000154973 #37	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a
Long-tailed chinchilla	MODERN SPECIES	109	DIPK1C (ENSCLAG00000014214)	C18orf63 (ENSCLAG00000008797)	CYB5A (ENSCLAG00000009123)	TIMM21 (ENSCLAG00000010578)	FBXO15 (ENSCLAG00000010080)	NETO1 (ENSCLAG00000009727)	CBLN2 (ENSCLAG00000007487)	ENSCLAG00000007863	ENSCLAG00000013595	SOCS6 (ENSCLAG00000012662)	RTTN (ENSCLAG00000008660)	ENSCLAG00000011300	CD226 (ENSCLAG00000009214)	DOK6 (ENSCLAG00000010707)	TMX3 (ENSCLAG00000008593)	DSEL (ENSCLAG00000010395) #22	CDH19 (ENSCLAG00000012863) #23	CDH7 (ENSCLAG00000009414) #24	SERPINB8 (ENSCLAG00000008433) #25	SERPINB2 (ENSCLAG00000011771) #27	SERPINB7 (ENSCLAG00000010465) #28	SERPINB11 (ENSCLAG00000010485) #29	ENSCLAG00000009434 #30	ENSCLAG00000007728 #34	SERPINB12 (ENSCLAG00000010100) #35	SERPINB5 (ENSCLAG00000009512) #36	ENSCLAG00000008326	VPS4B (ENSCLAG00000009108) #37	KDSR (ENSCLAG00000007841)	BCL2 (ENSCLAG00000011104)	PHLPP1 (ENSCLAG00000009105)