Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000175494	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154713.B	ENSGT00900000143503
Glires	ANCESTRAL SPECIES	8	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000175494	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154713.B	ENSGT00900000143503
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154713.B	ENSGT00900000143503
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B	ENSGT00940000159024
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Rat	MODERN SPECIES	5	ENSRNOG00000063288 #7	Pdgfra (ENSRNOG00000002244) #8	Gsx2 (ENSRNOG00000002266) #9	Chic2 (ENSRNOG00000002267) #10	Lnx1 (ENSRNOG00000002272) #11	Fip1l1 (ENSRNOG00000002275) #12	Scfd2 (ENSRNOG00000026828) #13	Rasl11b (ENSRNOG00000002097) #14	Usp46 (ENSRNOG00000002106) #15	LOC100363494 (ENSRNOG00000068757) #16	Spata18 (ENSRNOG00000002120) #17	Sgcb (ENSRNOG00000002135) #18	Lrrc66 (ENSRNOG00000026585) #19	Dcun1d4 (ENSRNOG00000002152) #20	Cwh43 (ENSRNOG00000002174) #21	Ociad2 (ENSRNOG00000002196) #22	Ociad1 (ENSRNOG00000002205) #23	Fryl (ENSRNOG00000002248) #24	Zar1 (ENSRNOG00000026150) #25	Slc10a4 (ENSRNOG00000026091) #26	Slain2 (ENSRNOG00000002271) #27	Gm10135 (ENSRNOG00000064628) #28	Tec (ENSRNOG00000002278) #29	Txk (ENSRNOG00000025925) #30	Nipal1 (ENSRNOG00000025882) #31	Cnga1 (ENSRNOG00000004778) #32	Nfxl1 (ENSRNOG00000058588) #33	Corin (ENSRNOG00000002302) #34	ENSRNOG00000069538 #35	Atp10d (ENSRNOG00000002312) #36	Commd8 (ENSRNOG00000002320) #37
Mus	ANCESTRAL SPECIES	14	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Ryukyu mouse	MODERN SPECIES	14	Kit (MGP_CAROLIEiJ_G0027310)	Pdgfra (MGP_CAROLIEiJ_G0027309) #8	Bicdl1 (MGP_CAROLIEiJ_G0027308)	Gsx2 (MGP_CAROLIEiJ_G0027307) #9	Chic2 (MGP_CAROLIEiJ_G0027306) #10	Lnx1 (MGP_CAROLIEiJ_G0027305) #11	Fip1l1 (MGP_CAROLIEiJ_G0027304) #12	Scfd2 (MGP_CAROLIEiJ_G0027303) #13	Rasl11b (MGP_CAROLIEiJ_G0027302) #14	Usp46 (MGP_CAROLIEiJ_G0027301) #15	Spata18 (MGP_CAROLIEiJ_G0027300) #17	Sgcb (MGP_CAROLIEiJ_G0027299) #18	MGP_CAROLIEiJ_G0027298	Dcun1d4 (MGP_CAROLIEiJ_G0027297) #20	Cwh43 (MGP_CAROLIEiJ_G0027296) #21	Ociad2 (MGP_CAROLIEiJ_G0027295) #22	Ociad1 (MGP_CAROLIEiJ_G0027294) #23	Fryl (MGP_CAROLIEiJ_G0027293) #24	Gm10135 (MGP_CAROLIEiJ_G0027292) #28	Slain2 (MGP_CAROLIEiJ_G0027291) #27	Tec (MGP_CAROLIEiJ_G0027290) #29	Txk (MGP_CAROLIEiJ_G0027289) #30	Nipal1 (MGP_CAROLIEiJ_G0027288) #31	Cnga1 (MGP_CAROLIEiJ_G0027287) #32	MGP_CAROLIEiJ_G0027285 #26	Zar1 (MGP_CAROLIEiJ_G0027284) #25	Nfxl1 (MGP_CAROLIEiJ_G0027283) #33	Corin (MGP_CAROLIEiJ_G0027282) #34	MGP_CAROLIEiJ_G0008954 #36	Commd8 (MGP_CAROLIEiJ_G0027281) #37	Gabrb1 (MGP_CAROLIEiJ_G0027280)
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
spretus	MODERN SPECIES	14	Kdr (MGP_SPRETEiJ_G0028305)	Kit (MGP_SPRETEiJ_G0028304)	Pdgfra (MGP_SPRETEiJ_G0028303) #8	Gsx2 (MGP_SPRETEiJ_G0028302) #9	Chic2 (MGP_SPRETEiJ_G0028301) #10	Lnx1 (MGP_SPRETEiJ_G0028300) #11	Fip1l1 (MGP_SPRETEiJ_G0028299) #12	Scfd2 (MGP_SPRETEiJ_G0028298) #13	Rasl11b (MGP_SPRETEiJ_G0028297) #14	Usp46 (MGP_SPRETEiJ_G0028296) #15	Spata18 (MGP_SPRETEiJ_G0028295) #17	Sgcb (MGP_SPRETEiJ_G0028294) #18	MGP_SPRETEiJ_G0028293	Dcun1d4 (MGP_SPRETEiJ_G0028292) #20	Cwh43 (MGP_SPRETEiJ_G0028291) #21	Ociad2 (MGP_SPRETEiJ_G0028290) #22	Ociad1 (MGP_SPRETEiJ_G0028289) #23	Fryl (MGP_SPRETEiJ_G0028288) #24	MGP_SPRETEiJ_G0028287 #25	Slc10a4-ps (MGP_SPRETEiJ_G0028286) #26	MGP_SPRETEiJ_G0028285 #26	Gm10135 (MGP_SPRETEiJ_G0028284) #28	Slain2 (MGP_SPRETEiJ_G0028283) #27	Tec (MGP_SPRETEiJ_G0028282) #29	Txk (MGP_SPRETEiJ_G0028281) #30	Nipal1 (MGP_SPRETEiJ_G0028280) #31	Cnga1 (MGP_SPRETEiJ_G0028279) #32	Nfxl1 (MGP_SPRETEiJ_G0028278) #33	Corin (MGP_SPRETEiJ_G0028277) #34	MGP_SPRETEiJ_G0009414 #36	Commd8 (MGP_SPRETEiJ_G0028276) #37
Steppe mouse	MODERN SPECIES	274	Gsx2 (ENSMSIG00000026518) #9	Chic2 (ENSMSIG00000026507) #10	ENSMSIG00000026501	Lnx1 (ENSMSIG00000026465) #11	Fip1l1 (ENSMSIG00000026147) #12	Scfd2 (ENSMSIG00000026110) #13	Rasl11b (ENSMSIG00000026099) #14	ENSMSIG00000026077	Usp46 (ENSMSIG00000026049) #15	ENSMSIG00000026041	Spata18 (ENSMSIG00000025979) #17	Sgcb (ENSMSIG00000025957) #18	Lrrc66 (ENSMSIG00000025948) #19	Dcun1d4 (ENSMSIG00000025811) #20	Cwh43 (ENSMSIG00000025727) #21	ENSMSIG00000025682 #22	Ociad1 (ENSMSIG00000025586) #23	Fryl (ENSMSIG00000025235) #24	Zar1 (ENSMSIG00000025195) #25	ENSMSIG00000025179 #26	Gm10135 (ENSMSIG00000025164) #28	Slain2 (ENSMSIG00000025122) #27	Tec (ENSMSIG00000025047) #29	Txk (ENSMSIG00000024944) #30	Nipal1 (ENSMSIG00000024929) #31	ENSMSIG00000024923
Mouse	MODERN SPECIES	14	Kdr (ENSMUSG00000062960)	Kit (ENSMUSG00000005672)	Pdgfra (ENSMUSG00000029231) #8	Gsx2 (ENSMUSG00000035946) #9	Chic2 (ENSMUSG00000029229) #10	Lnx1 (ENSMUSG00000029228) #11	Fip1l1 (ENSMUSG00000029227) #12	Scfd2 (ENSMUSG00000062110) #13	Rasl11b (ENSMUSG00000049907) #14	Usp46 (ENSMUSG00000054814) #15	Spata18 (ENSMUSG00000029155) #17	Sgcb (ENSMUSG00000029156) #18	Lrrc66 (ENSMUSG00000067206) #19	Dcun1d4 (ENSMUSG00000051674) #20	Cwh43 (ENSMUSG00000029154) #21	Ociad2 (ENSMUSG00000029153) #22	Ociad1 (ENSMUSG00000029152) #23	Fryl (ENSMUSG00000070733) #24	Slc10a4 (ENSMUSG00000029219) #26	Gm10135 (ENSMUSG00000063656) #28	Slain2 (ENSMUSG00000036087) #27	Tec (ENSMUSG00000029217) #29	Txk (ENSMUSG00000054892) #30	Nipal1 (ENSMUSG00000067219) #31	Cnga1 (ENSMUSG00000067220) #32	Slc10a4-ps (ENSMUSG00000060204) #26	Zar1 (ENSMUSG00000063935) #25	Nfxl1 (ENSMUSG00000072889) #33	Corin (ENSMUSG00000005220) #34	Atp10d (ENSMUSG00000046808) #36	Commd8 (ENSMUSG00000029213) #37
Shrew mouse	MODERN SPECIES	4	Kdr (MGP_PahariEiJ_G0017091)	Kit (MGP_PahariEiJ_G0017090)	Pdgfra (MGP_PahariEiJ_G0017089) #8	Gsx2 (MGP_PahariEiJ_G0017088) #9	Chic2 (MGP_PahariEiJ_G0017087) #10	Lnx1 (MGP_PahariEiJ_G0017086) #11	Fip1l1 (MGP_PahariEiJ_G0017085) #12	Scfd2 (MGP_PahariEiJ_G0017084) #13	Rasl11b (MGP_PahariEiJ_G0017083) #14	Usp46 (MGP_PahariEiJ_G0017082) #15	Spata18 (MGP_PahariEiJ_G0017081) #17	Sgcb (MGP_PahariEiJ_G0017080) #18	MGP_PahariEiJ_G0017079	Dcun1d4 (MGP_PahariEiJ_G0017078) #20	Cwh43 (MGP_PahariEiJ_G0017077) #21	Ociad2 (MGP_PahariEiJ_G0017076) #22	Ociad1 (MGP_PahariEiJ_G0017075) #23	Fryl (MGP_PahariEiJ_G0017074) #24	Zar1 (MGP_PahariEiJ_G0017073) #25	Slc10a4-ps (MGP_PahariEiJ_G0017072) #26	Slc10a4 (MGP_PahariEiJ_G0017071) #26	Gm10135 (MGP_PahariEiJ_G0017070) #28	Slain2 (MGP_PahariEiJ_G0017069) #27	Tec (MGP_PahariEiJ_G0017068) #29	Txk (MGP_PahariEiJ_G0017067) #30	Nipal1 (MGP_PahariEiJ_G0017066) #31	Cnga1 (MGP_PahariEiJ_G0017065) #32	Nfxl1 (MGP_PahariEiJ_G0017064) #33	Corin (MGP_PahariEiJ_G0017063) #34	MGP_PahariEiJ_G0008413 #36	Commd8 (MGP_PahariEiJ_G0017062) #37
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37
Golden Hamster	MODERN SPECIES	720	Kdr (ENSMAUG00000016126)	ENSMAUG00000013726	Pdgfra (ENSMAUG00000018986) #8	Gsx2 (ENSMAUG00000022163) #9	Chic2 (ENSMAUG00000012879) #10	Lnx1 (ENSMAUG00000021129) #11	Fip1l1 (ENSMAUG00000010526) #12	Scfd2 (ENSMAUG00000011399) #13	Rasl11b (ENSMAUG00000003048) #14	Usp46 (ENSMAUG00000017316) #15	Spata18 (ENSMAUG00000011598) #17	Sgcb (ENSMAUG00000006887) #18	Lrrc66 (ENSMAUG00000009663) #19	Dcun1d4 (ENSMAUG00000000472) #20	Cwh43 (ENSMAUG00000008567) #21	Ociad2 (ENSMAUG00000014577) #22	ENSMAUG00000015840 #23	ENSMAUG00000017420	ENSMAUG00000012930 #24	ENSMAUG00000012913 #24	ENSMAUG00000016747 #26	Gm10135 (ENSMAUG00000000502) #28	ENSMAUG00000009182 #27	Txk (ENSMAUG00000016831) #30	Nipal1 (ENSMAUG00000016715) #31	Cnga1 (ENSMAUG00000020046) #32	Nfxl1 (ENSMAUG00000021446) #33	Corin (ENSMAUG00000013589) #34	ENSMAUG00000018427 #36	Commd8 (ENSMAUG00000019027) #37	Gabrb1 (ENSMAUG00000018940)
Chinese hamster chok1gshd	MODERN SPECIES	44	Chic2 (ENSCGRG00001024567) #10	Lnx1 (ENSCGRG00001011729) #11	Fip1l1 (ENSCGRG00001018568) #12	Scfd2 (ENSCGRG00001012042) #13	Rasl11b (ENSCGRG00001011283) #14	ENSCGRG00001002572	Usp46 (ENSCGRG00001018619) #15	ENSCGRG00001000842	ENSCGRG00001013783	Spata18 (ENSCGRG00001005385) #17	Sgcb (ENSCGRG00001022740) #18	Lrrc66 (ENSCGRG00001017360) #19	ENSCGRG00001011436	Dcun1d4 (ENSCGRG00001001891) #20	Cwh43 (ENSCGRG00001001137) #21	Ociad2 (ENSCGRG00001021466) #22	ENSCGRG00001016984 #23	Fryl (ENSCGRG00001000452) #24	Zar1 (ENSCGRG00001020317) #25	Slc10a4 (ENSCGRG00001013992) #26	Gm10135 (ENSCGRG00001010052) #28	Slain2 (ENSCGRG00001005700) #27	Tec (ENSCGRG00001016993) #29	Txk (ENSCGRG00001010710) #30	Nipal1 (ENSCGRG00001000663) #31	Cnga1 (ENSCGRG00001020845) #32	Nfxl1 (ENSCGRG00001013384) #33	Corin (ENSCGRG00001025041) #34	ENSCGRG00001014729 #36	ENSCGRG00001013940 #36	Commd8 (ENSCGRG00001012401) #37
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Northern American deer mouse	MODERN SPECIES	1	ENSPEMG00000025221	Pdgfra (ENSPEMG00000007844) #8	Gsx2 (ENSPEMG00000008341) #9	Chic2 (ENSPEMG00000016307) #10	Lnx1 (ENSPEMG00000001631) #11	Fip1l1 (ENSPEMG00000002025) #12	ENSPEMG00000026634	Scfd2 (ENSPEMG00000009457) #13	Rasl11b (ENSPEMG00000025524) #14	Usp46 (ENSPEMG00000009974) #15	Spata18 (ENSPEMG00000024192) #17	Sgcb (ENSPEMG00000024200) #18	Lrrc66 (ENSPEMG00000017432) #19	Dcun1d4 (ENSPEMG00000009638) #20	Cwh43 (ENSPEMG00000004208) #21	Ociad2 (ENSPEMG00000003543) #22	Ociad1 (ENSPEMG00000018262) #23	Fryl (ENSPEMG00000011628) #24	Zar1 (ENSPEMG00000021539) #25	Slc10a4-ps (ENSPEMG00000027365) #26	Gm10135 (ENSPEMG00000015600) #28	Slain2 (ENSPEMG00000025573) #27	Tec (ENSPEMG00000008562) #29	Txk (ENSPEMG00000022661) #30	Nipal1 (ENSPEMG00000028846) #31	Cnga1 (ENSPEMG00000022363) #32	Nfxl1 (ENSPEMG00000021617) #33	Corin (ENSPEMG00000022577) #34	ENSPEMG00000025175 #36	ENSPEMG00000003618 #36	ENSPEMG00000017813 #37
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	349	Kdr (ENSMOCG00000017085)	Kit (ENSMOCG00000007652)	Pdgfra (ENSMOCG00000012103) #8	Gsx2 (ENSMOCG00000010227) #9	Chic2 (ENSMOCG00000000811) #10	Lnx1 (ENSMOCG00000015978) #11	Fip1l1 (ENSMOCG00000008020) #12	Scfd2 (ENSMOCG00000015774) #13	Rasl11b (ENSMOCG00000022471) #14	Usp46 (ENSMOCG00000016898) #15	Spata18 (ENSMOCG00000019737) #17	Sgcb (ENSMOCG00000000430) #18	Lrrc66 (ENSMOCG00000017330) #19	Dcun1d4 (ENSMOCG00000012545) #20	Cwh43 (ENSMOCG00000009924) #21	ENSMOCG00000000283 #22	ENSMOCG00000000836 #23	ENSMOCG00000016810	Fryl (ENSMOCG00000012881) #24	Zar1 (ENSMOCG00000001183) #25	Slc10a4-ps (ENSMOCG00000019194) #26	Gm10135 (ENSMOCG00000012163) #28	Slain2 (ENSMOCG00000017102) #27	Tec (ENSMOCG00000014997) #29	Txk (ENSMOCG00000007298) #30	Nipal1 (ENSMOCG00000013121) #31	Cnga1 (ENSMOCG00000022062) #32	Nfxl1 (ENSMOCG00000013575) #33	Corin (ENSMOCG00000022718) #34	Atp10d (ENSMOCG00000010507) #36	Commd8 (ENSMOCG00000010168) #37
Prairie vole	MODERN SPECIES	15	Crebbp (ENSMOCG00000016830)	Trap1 (ENSMOCG00000010441)	Dnase1 (ENSMOCG00000018529)	ENSMOCG00000004024	Nlrc3 (ENSMOCG00000009820)	Cluap1 (ENSMOCG00000004106)	1700037C18Rik (ENSMOCG00000008711)	Naa60 (ENSMOCG00000016632)	Zfp597 (ENSMOCG00000005901)	Zfp174 (ENSMOCG00000004638)	ENSMOCG00000001631	ENSMOCG00000010482	ENSMOCG00000002263	Zfp263 (ENSMOCG00000021995)	Mefv (ENSMOCG00000021086)	ENSMOCG00000008987 #22	ENSMOCG00000001000	ENSMOCG00000001991	ENSMOCG00000002042	ENSMOCG00000001457	ENSMOCG00000001722	ENSMOCG00000018631	Zfp13 (ENSMOCG00000015466)	Zfp213 (ENSMOCG00000021846)	Zscan10 (ENSMOCG00000006281)	Mmp25 (ENSMOCG00000002390)	Bicdl2 (ENSMOCG00000019311)	Thoc6 (ENSMOCG00000007877)	ENSMOCG00000022196	ENSMOCG00000022275	Cldn6 (ENSMOCG00000020385)
Lesser Egyptian jerboa	MODERN SPECIES	68	Ivns1abp (ENSJJAG00000020317)	Kit (ENSJJAG00000002257)	Pdgfra (ENSJJAG00000015846) #8	Gsx2 (ENSJJAG00000011370) #9	Chic2 (ENSJJAG00000022415) #10	Lnx1 (ENSJJAG00000011865) #11	ENSJJAG00000013826	ENSJJAG00000021984	Scfd2 (ENSJJAG00000012848) #13	Rasl11b (ENSJJAG00000022168) #14	Usp46 (ENSJJAG00000014611) #15	ENSJJAG00000019112 #17	Sgcb (ENSJJAG00000014651) #18	Dcun1d4 (ENSJJAG00000004315) #20	Cwh43 (ENSJJAG00000003882) #21	Ociad2 (ENSJJAG00000014970) #22	ENSJJAG00000022501 #23	ENSJJAG00000000670	ENSJJAG00000017344 #24	ENSJJAG00000000411 #24	ENSJJAG00000021698 #24	ENSJJAG00000021180 #25	Slc10a4 (ENSJJAG00000014813) #26	Gm10135 (ENSJJAG00000009677) #28	ENSJJAG00000005087 #27	ENSJJAG00000007686	ENSJJAG00000024258	Tec (ENSJJAG00000019635) #29	Txk (ENSJJAG00000023369) #30	Nipal1 (ENSJJAG00000005517) #31	Cnga1 (ENSJJAG00000023607) #32
Kangaroo rat	MODERN SPECIES	327	Srd5a3 (ENSDORG00000008012)	Kdr (ENSDORG00000006837)	Kit (ENSDORG00000007317)	Pdgfra (ENSDORG00000002763) #8	Gsx2 (ENSDORG00000000416) #9	Chic2 (ENSDORG00000027994) #10	Lnx1 (ENSDORG00000005635) #11	ENSDORG00000005629	Scfd2 (ENSDORG00000005627) #13	Rasl11b (ENSDORG00000030008) #14	Usp46 (ENSDORG00000005800) #15	ENSDORG00000013679 #17	Sgcb (ENSDORG00000009646) #18	Dcun1d4 (ENSDORG00000009641) #20	Cwh43 (ENSDORG00000012169) #21	Ociad2 (ENSDORG00000016565) #22	ENSDORG00000014483 #23	Fryl (ENSDORG00000010559) #24	Slc10a4-ps (ENSDORG00000010557) #26	ENSDORG00000013286 #27	Tec (ENSDORG00000007674) #29	Txk (ENSDORG00000007673) #30	Nipal1 (ENSDORG00000028905) #31	ENSDORG00000004728 #32	Nfxl1 (ENSDORG00000004725) #33	Corin (ENSDORG00000016468) #34	Atp10d (ENSDORG00000016466) #36	Commd8 (ENSDORG00000023178) #37	Gabrb1 (ENSDORG00000010035)	Gabra4 (ENSDORG00000010032)	Gabra2 (ENSDORG00000011516)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154713.B	ENSGT00900000143503
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00900000143503	ENSGT00940000154245.B
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121.i #37	ENSGT00940000154245.B	ENSGT00940000159024
Alpin marmot	MODERN SPECIES	9	GSX2 (ENSMMMG00000020460) #9	CHIC2 (ENSMMMG00000020457) #10	LNX1 (ENSMMMG00000020305) #11	ENSMMMG00000020140 #12	SCFD2 (ENSMMMG00000020102) #13	RASL11B (ENSMMMG00000020096) #14	ENSMMMG00000020094	ENSMMMG00000020086	USP46 (ENSMMMG00000020069) #15	ENSMMMG00000020060 #17	ENSMMMG00000020059 #17	SGCB (ENSMMMG00000020055) #18	LRRC66 (ENSMMMG00000020043) #19	DCUN1D4 (ENSMMMG00000020029) #20	CWH43 (ENSMMMG00000019997) #21	OCIAD2 (ENSMMMG00000019984) #22	OCIAD1 (ENSMMMG00000019868) #23	FRYL (ENSMMMG00000019781) #24	ENSMMMG00000019771 #25	ENSMMMG00000019763 #26	SLAIN2 (ENSMMMG00000019758) #27	TEC (ENSMMMG00000019700) #29	TXK (ENSMMMG00000019614) #30	NIPAL1 (ENSMMMG00000019609) #31	CNGA1 (ENSMMMG00000019576) #32	NFXL1 (ENSMMMG00000019525) #33	CORIN (ENSMMMG00000019455) #34	ENSMMMG00000019438 #36	ENSMMMG00000019428 #36	COMMD8 (ENSMMMG00000019422) #37	GABRB1 (ENSMMMG00000019411)
Marmotini_b	ANCESTRAL SPECIES	48	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT01060000248700	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121.i #37	ENSGT00940000154245.B	ENSGT00940000159024
Squirrel	MODERN SPECIES	82	PDGFRA (ENSSTOG00000011314) #8	GSX2 (ENSSTOG00000023286) #9	CHIC2 (ENSSTOG00000023668) #10	LNX1 (ENSSTOG00000012178) #11	ENSSTOG00000012166	SCFD2 (ENSSTOG00000012162) #13	RASL11B (ENSSTOG00000027610) #14	ENSSTOG00000033365	USP46 (ENSSTOG00000012149) #15	ENSSTOG00000004581 #17	ENSSTOG00000032283 #17	SGCB (ENSSTOG00000004569) #18	LRRC66 (ENSSTOG00000022844) #19	DCUN1D4 (ENSSTOG00000013799) #20	CWH43 (ENSSTOG00000014976) #21	OCIAD2 (ENSSTOG00000014971) #22	OCIAD1 (ENSSTOG00000014963) #23	FRYL (ENSSTOG00000007280) #24	ZAR1 (ENSSTOG00000031847) #25	SLC10A4 (ENSSTOG00000027820) #26	SLAIN2 (ENSSTOG00000007212) #27	TEC (ENSSTOG00000015809) #29	TXK (ENSSTOG00000015802) #30	NIPAL1 (ENSSTOG00000010605) #31	CNGA1 (ENSSTOG00000001278) #32	NFXL1 (ENSSTOG00000001258) #33	CORIN (ENSSTOG00000001240) #34	ENSSTOG00000001229 #36	ENSSTOG00000029527 #36	ENSSTOG00000031460 #37	GABRB1 (ENSSTOG00000008575)
Arctic ground squirrel	MODERN SPECIES	2	KIT (ENSUPAG00010020754)	PDGFRA (ENSUPAG00010020707) #8	GSX2 (ENSUPAG00010020700) #9	CHIC2 (ENSUPAG00010020698) #10	LNX1 (ENSUPAG00010020578) #11	ENSUPAG00010020429	SCFD2 (ENSUPAG00010020412) #13	RASL11B (ENSUPAG00010020408) #14	USP46 (ENSUPAG00010020388) #15	ENSUPAG00010020376 #17	ENSUPAG00010020374 #17	SGCB (ENSUPAG00010020369) #18	LRRC66 (ENSUPAG00010020366) #19	DCUN1D4 (ENSUPAG00010020336) #20	CWH43 (ENSUPAG00010020291) #21	OCIAD2 (ENSUPAG00010020280) #22	OCIAD1 (ENSUPAG00010020236) #23	FRYL (ENSUPAG00010020086) #24	ENSUPAG00010020079 #25	ENSUPAG00010020074 #26	SLAIN2 (ENSUPAG00010020060) #27	TEC (ENSUPAG00010020011) #29	TXK (ENSUPAG00010019947) #30	NIPAL1 (ENSUPAG00010019941) #31	CNGA1 (ENSUPAG00010019928) #32	NFXL1 (ENSUPAG00010019911) #33	CORIN (ENSUPAG00010019864) #34	ATP10D (ENSUPAG00010019845) #36	COMMD8 (ENSUPAG00010019840) #37	GABRB1 (ENSUPAG00010019831)	GABRA4 (ENSUPAG00010019816)
Eurasian red squirrel	MODERN SPECIES	18	PDGFRA (ENSSVLG00005022004) #8	GSX2 (ENSSVLG00005022055) #9	CHIC2 (ENSSVLG00005022117) #10	ENSSVLG00005022179	LNX1 (ENSSVLG00005022254) #11	FIP1L1 (ENSSVLG00005022448)	SCFD2 (ENSSVLG00005022776) #13	RASL11B (ENSSVLG00005022855) #14	ENSSVLG00005022878	USP46 (ENSSVLG00005022950) #15	SPATA18 (ENSSVLG00005023119) #17	SGCB (ENSSVLG00005023300) #18	LRRC66 (ENSSVLG00005023343) #19	ENSSVLG00005023431 #20	CWH43 (ENSSVLG00005023619) #21	OCIAD2 (ENSSVLG00005023758) #22	OCIAD1 (ENSSVLG00005023852) #23	FRYL (ENSSVLG00005023963) #24	ZAR1 (ENSSVLG00005023995) #25	SLC10A4 (ENSSVLG00005024018) #26	SLAIN2 (ENSSVLG00005024044) #27	TEC (ENSSVLG00005024112) #29	TXK (ENSSVLG00005024163) #30	ENSSVLG00005024245 #31	CNGA1 (ENSSVLG00005024292) #32	NFXL1 (ENSSVLG00005024329) #33	CORIN (ENSSVLG00005024434) #34	ATP10D (ENSSVLG00005024815) #36	COMMD8 (ENSSVLG00005024853) #37	ENSSVLG00005024866	GABRB1 (ENSSVLG00005024897)
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT01060000248700	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B	ENSGT00940000159024
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	1	FIP1L1 (ENSHGLG00000018937)	SCFD2 (ENSHGLG00000008861) #13	ENSHGLG00000035001	RASL11B (ENSHGLG00000018686) #14	ENSHGLG00000048480	USP46 (ENSHGLG00000018346) #15	ENSHGLG00000015649	SPATA18 (ENSHGLG00000040259) #17	ENSHGLG00000038499	ENSHGLG00000040271 #19	ENSHGLG00000017366 #20	ENSHGLG00000031874	ENSHGLG00000021184	CWH43 (ENSHGLG00000017904) #21	ENSHGLG00000033110	ENSHGLG00000009214 #22	OCIAD1 (ENSHGLG00000005766) #23	ENSHGLG00000007948 #24	ENSHGLG00000045336 #24	ENSHGLG00000039998 #25	SLC10A4 (ENSHGLG00000013563) #26	ENSHGLG00000000325	SLAIN2 (ENSHGLG00000019447) #27	ENSHGLG00000043919	ENSHGLG00000042797	TEC (ENSHGLG00000015780) #29	ENSHGLG00000013808 #30	NIPAL1 (ENSHGLG00000044376) #31	CNGA1 (ENSHGLG00000018977) #32	NFXL1 (ENSHGLG00000014142) #33	CORIN (ENSHGLG00000006527) #34
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000012561	ENSHGLG00000040461	ZFC3H1 (ENSHGLG00000014297)	LGR5 (ENSHGLG00000004903)	TSPAN8 (ENSHGLG00000009287)	ENSHGLG00000048295	PTPRR (ENSHGLG00000005019)	ENSHGLG00000035838	PTPRB (ENSHGLG00000017872)	ENSHGLG00000004965	ENSHGLG00000039489	ENSHGLG00000008390	ENSHGLG00000012413	ENSHGLG00000016095	ENSHGLG00000015773	ENSHGLG00000033107 #22	BEST3 (ENSHGLG00000005639)	ENSHGLG00000032589	ENSHGLG00000008737	FRS2 (ENSHGLG00000004690)	ENSHGLG00000020270	YEATS4 (ENSHGLG00000005930)	ENSHGLG00000000765	ENSHGLG00000000750	ENSHGLG00000032896	ENSHGLG00000036390	ENSHGLG00000000792	ENSHGLG00000041415	ENSHGLG00000000831	Mdm2 (ENSHGLG00000000856)	ENSHGLG00000041090
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT00940000162578 #12	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B	ENSGT00940000159024
Guinea pig	MODERN SPECIES	24	SRD5A3 (ENSCPOG00000011801)	KDR (ENSCPOG00000010001)	KIT (ENSCPOG00000011411)	PDGFRA (ENSCPOG00000011782) #8	GSX2 (ENSCPOG00000005837) #9	CHIC2 (ENSCPOG00000040036) #10	LNX1 (ENSCPOG00000010775) #11	ENSCPOG00000010770 #12	SCFD2 (ENSCPOG00000039431) #13	RASL11B (ENSCPOG00000010760) #14	USP46 (ENSCPOG00000007660) #15	ENSCPOG00000011469 #17	SGCB (ENSCPOG00000030752) #18	DCUN1D4 (ENSCPOG00000008945) #20	CWH43 (ENSCPOG00000014177) #21	ENSCPOG00000019887 #22	OCIAD1 (ENSCPOG00000011863) #23	FRYL (ENSCPOG00000009647) #24	SLC10A4 (ENSCPOG00000009644) #26	SLAIN2 (ENSCPOG00000002806) #27	TEC (ENSCPOG00000008836) #29	TXK (ENSCPOG00000014571) #30	NIPAL1 (ENSCPOG00000036596) #31	CNGA1 (ENSCPOG00000024444) #32	NFXL1 (ENSCPOG00000014371) #33	CORIN (ENSCPOG00000006957) #34	ATP10D (ENSCPOG00000006948) #36	COMMD8 (ENSCPOG00000015113) #37	GABRB1 (ENSCPOG00000035961)	GABRA4 (ENSCPOG00000009388)	GABRA2 (ENSCPOG00000023215)
Hystricomorpha_b	ANCESTRAL SPECIES	76	ENSGT00940000156710	ENSGT00940000155626	ENSGT00940000156021 #8	ENSGT00940000156043 #9	ENSGT00390000003601.b #10	ENSGT00940000158757 #11	ENSGT01060000248700	ENSGT00390000011192 #13	ENSGT00940000158643 #14	ENSGT00940000153284.b #15	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26
Long-tailed chinchilla	MODERN SPECIES	154	TMEM165 (ENSCLAG00000005359)	SRD5A3 (ENSCLAG00000014169)	KDR (ENSCLAG00000010052)	KIT (ENSCLAG00000006440)	PDGFRA (ENSCLAG00000005250) #8	CHIC2 (ENSCLAG00000005438) #10	LNX1 (ENSCLAG00000005760) #11	ENSCLAG00000003675	SCFD2 (ENSCLAG00000006610) #13	RASL11B (ENSCLAG00000005450) #14	USP46 (ENSCLAG00000006241) #15	ENSCLAG00000006715 #17	SGCB (ENSCLAG00000008014) #18	DCUN1D4 (ENSCLAG00000008724) #20	CWH43 (ENSCLAG00000011864) #21	OCIAD2 (ENSCLAG00000012791) #22	OCIAD1 (ENSCLAG00000004026) #23	FRYL (ENSCLAG00000004818) #24	SLC10A4 (ENSCLAG00000009043) #26
Degu	MODERN SPECIES	60	LNX1 (ENSODEG00000010836) #11	ENSODEG00000009001	ENSODEG00000019669	ENSODEG00000008819	SCFD2 (ENSODEG00000010104) #13	RASL11B (ENSODEG00000010294) #14	USP46 (ENSODEG00000009787) #15	ENSODEG00000008705	ENSODEG00000019795	ENSODEG00000009441 #17	ENSODEG00000009977 #17	SGCB (ENSODEG00000009784) #18	ENSODEG00000009044 #20	ENSODEG00000009096	CWH43 (ENSODEG00000009451) #21	OCIAD2 (ENSODEG00000010340) #22	ENSODEG00000010537	OCIAD1 (ENSODEG00000009198) #23	FRYL (ENSODEG00000009331) #24	ENSODEG00000008772 #25	SLC10A4 (ENSODEG00000010331) #26	ENSODEG00000008159	VSNL1 (ENSODEG00000008555)	SMC6 (ENSODEG00000008987)	GEN1 (ENSODEG00000010156)	MSGN1 (ENSODEG00000009615)	ENSODEG00000019755	KCNS3 (ENSODEG00000009066)	RDH14 (ENSODEG00000008458)	NT5C1B (ENSODEG00000008929)	OSR1 (ENSODEG00000008728)
Lagomorpha	ANCESTRAL SPECIES	157											ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #29	ENSGT00940000160857 #30	ENSGT00940000160022 #31	ENSGT00940000156074 #32	ENSGT00940000157059 #33	ENSGT00940000157103 #34	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000166149
Rabbit	MODERN SPECIES	11	CTSB (ENSOCUG00000016580)	DEFB136 (ENSOCUG00000006244)	ENSOCUG00000000221	ENSOCUG00000034389	ENSOCUG00000037755	ENSOCUG00000024761	DEFB109B (ENSOCUG00000037513)	ENSOCUG00000029122	SPATA18 (ENSOCUG00000007989) #17	ENSOCUG00000030792	SGCB (ENSOCUG00000005474) #18	LRRC66 (ENSOCUG00000005466) #19	DCUN1D4 (ENSOCUG00000012352) #20	ENSOCUG00000039350	CWH43 (ENSOCUG00000017815) #21	OCIAD2 (ENSOCUG00000007907) #22	OCIAD1 (ENSOCUG00000020964) #23	FRYL (ENSOCUG00000009628) #24	ENSOCUG00000034026 #25	SLC10A4 (ENSOCUG00000009624) #26	SLAIN2 (ENSOCUG00000009618) #27	TXK (ENSOCUG00000007648) #30	TEC (ENSOCUG00000007656) #29	NIPAL1 (ENSOCUG00000007643) #31	CNGA1 (ENSOCUG00000006384) #32	NFXL1 (ENSOCUG00000008876) #33	ENSOCUG00000033548	CORIN (ENSOCUG00000008858) #34	ATP10D (ENSOCUG00000008840) #36	COMMD8 (ENSOCUG00000008834) #37	ENSOCUG00000027343
Pika	MODERN SPECIES	155															CWH43 (ENSOPRG00000001270) #21	OCIAD2 (ENSOPRG00000001254) #22	OCIAD1 (ENSOPRG00000001239) #23
Tree shrew	MODERN SPECIES	286																OCIAD2 (ENSTBEG00000012450) #22	ENSTBEG00000012373 #23